locus-tag	class	description
AC2117_00001	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AC2117_00003	COG0592	DNA-directed DNA polymerase activity
AC2117_00005	COG0187	DNA topoisomerase II activity
AC2117_00008	COG0488	(ABC) transporter
AC2117_00013	COG0596	Alpha beta hydrolase
AC2117_00014	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AC2117_00015	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AC2117_00024	COG0733	neurotransmitter:sodium symporter activity
AC2117_00032	COG2233	PERMEase
AC2117_00035	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AC2117_00042	COG2814	Major facilitator Superfamily
AC2117_00043	COG0656	L-ascorbic acid biosynthetic process
AC2117_00044	COG0583	DNA-binding transcription factor activity
AC2117_00046	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AC2117_00047	COG1064	alcohol dehydrogenase
AC2117_00048	COG2818	Glycosylase
AC2117_00051	COG1194	a g-specific adenine glycosylase
AC2117_00054	COG5487	UPF0391 membrane protein
AC2117_00055	COG2983	Belongs to the UPF0260 family
AC2117_00056	COG2133	pyrroloquinoline quinone binding
AC2117_00057	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AC2117_00058	COG2116	formate transmembrane transporter activity
AC2117_00061	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AC2117_00062	COG1335	isochorismatase
AC2117_00063	COG0385	Bile acid
AC2117_00064	COG1683	Conserved Protein
AC2117_00067	COG0346	lactoylglutathione lyase activity
AC2117_00068	COG0625	glutathione transferase activity
AC2117_00070	COG1113	amino acid transport
AC2117_00072	COG0523	cobalamin synthesis protein
AC2117_00073	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AC2117_00073	COG2755	lipolytic protein G-D-S-L family
AC2117_00074	COG2188	Transcriptional regulator
AC2117_00080	COG0010	Belongs to the arginase family
AC2117_00082	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AC2117_00086	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AC2117_00088	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AC2117_00089	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AC2117_00109	COG0534	Mate efflux family protein
AC2117_00110	COG0436	Aminotransferase
AC2117_00111	COG2733	membrane
AC2117_00114	COG2918	glutathione biosynthetic process
AC2117_00116	COG3501	Rhs element vgr protein
AC2117_00121	COG3150	esterase
AC2117_00123	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
AC2117_00125	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AC2117_00127	COG2233	PERMEase
AC2117_00128	COG2351	hydroxyisourate hydrolase activity
AC2117_00135	COG3706	GGDEF domain
AC2117_00139	COG0708	Exodeoxyribonuclease III
AC2117_00146	COG0189	ligase activity
AC2117_00150	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AC2117_00152	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AC2117_00155	COG4942	peptidase
AC2117_00157	COG0508	dehydrogenase complex catalyzes the overall conversion of
AC2117_00159	COG2119	membrane
AC2117_00160	COG4774	siderophore transport
AC2117_00164	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AC2117_00169	COG1902	pentaerythritol trinitrate reductase activity
AC2117_00170	COG1519	Transferase
AC2117_00171	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AC2117_00172	COG0668	transmembrane transport
AC2117_00174	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AC2117_00175	COG1335	isochorismatase
AC2117_00176	COG1522	sequence-specific DNA binding
AC2117_00181	COG0784	Response regulator, receiver
AC2117_00181	COG2198	Histidine kinase
AC2117_00181	COG2205	protein histidine kinase activity
AC2117_00182	COG3162	membrane
AC2117_00183	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AC2117_00185	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AC2117_00187	COG3706	GGDEF domain
AC2117_00188	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AC2117_00189	COG1309	transcriptional regulator
AC2117_00193	COG0300	oxidoreductase activity
AC2117_00194	COG0789	Transcriptional regulator
AC2117_00195	COG0351	phosphomethylpyrimidine kinase
AC2117_00195	COG0352	thiamine-phosphate diphosphorylase activity
AC2117_00195	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AC2117_00197	COG2814	Major facilitator Superfamily
AC2117_00198	COG0629	single-stranded DNA binding
AC2117_00208	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AC2117_00210	COG1113	amino acid transport
AC2117_00212	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AC2117_00213	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_00214	COG1335	isochorismatase
AC2117_00217	COG1335	isochorismatase
AC2117_00232	COG2814	Major facilitator Superfamily
AC2117_00233	COG0583	DNA-binding transcription factor activity
AC2117_00241	COG0667	Aldo Keto reductase
AC2117_00249	COG1733	regulation of RNA biosynthetic process
AC2117_00250	COG2249	NAD(P)H dehydrogenase (quinone) activity
AC2117_00262	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AC2117_00267	COG1132	(ABC) transporter
AC2117_00271	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AC2117_00277	COG0427	acetyl-CoA hydrolase
AC2117_00278	COG2205	protein histidine kinase activity
AC2117_00279	COG0745	RESPONSE REGULATOR receiver
AC2117_00281	COG0659	secondary active sulfate transmembrane transporter activity
AC2117_00282	COG4221	oxidoreductase activity
AC2117_00284	COG0488	(ABC) transporter
AC2117_00296	COG0833	amino acid
AC2117_00305	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AC2117_00306	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AC2117_00309	COG2226	methyltransferase
AC2117_00319	COG0067	glutamate synthase
AC2117_00319	COG0070	glutamate synthase
AC2117_00319	COG0069	glutamate synthase activity
AC2117_00320	COG0493	'glutamate synthase
AC2117_00322	COG1704	LemA family
AC2117_00323	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AC2117_00326	COG3307	-O-antigen
AC2117_00330	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AC2117_00332	COG0194	GDP metabolic process
AC2117_00342	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AC2117_00346	COG5380	lipid catabolic process
AC2117_00347	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AC2117_00350	COG5006	permease, DMT superfamily
AC2117_00351	COG5006	permease, DMT superfamily
AC2117_00352	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AC2117_00353	COG0277	FAD linked oxidase domain protein
AC2117_00356	COG2249	NAD(P)H dehydrogenase (quinone) activity
AC2117_00360	COG1289	transmembrane transporter activity
AC2117_00362	COG0628	permease
AC2117_00369	COG0833	amino acid
AC2117_00370	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AC2117_00371	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AC2117_00373	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_00381	COG0583	DNA-binding transcription factor activity
AC2117_00382	COG1794	racemase activity, acting on amino acids and derivatives
AC2117_00383	COG0583	DNA-binding transcription factor activity
AC2117_00388	COG0752	glycyl-tRNA synthetase alpha subunit
AC2117_00392	COG0517	IMP dehydrogenase activity
AC2117_00393	COG1983	PspC domain protein
AC2117_00395	COG1960	acyl-CoA dehydrogenase activity
AC2117_00398	COG0408	coproporphyrinogen oxidase activity
AC2117_00402	COG0513	Belongs to the DEAD box helicase family
AC2117_00404	COG1127	ABC transporter
AC2117_00405	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AC2117_00409	COG0598	Magnesium transport protein CorA
AC2117_00411	COG0494	nUDIX hydrolase
AC2117_00412	COG1040	competence protein
AC2117_00413	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AC2117_00416	COG2937	Belongs to the GPAT DAPAT family
AC2117_00417	COG1946	Acyl-CoA thioesterase
AC2117_00418	COG1301	dicarboxylic acid transport
AC2117_00421	COG1959	2 iron, 2 sulfur cluster binding
AC2117_00422	COG1017	nitric oxide dioxygenase activity
AC2117_00422	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AC2117_00423	COG0433	COG0433 Predicted ATPase
AC2117_00424	COG0626	cystathionine gamma-synthase activity
AC2117_00427	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AC2117_00428	COG0088	Forms part of the polypeptide exit tunnel
AC2117_00432	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AC2117_00448	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AC2117_00450	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AC2117_00455	COG1960	acyl-CoA dehydrogenase activity
AC2117_00456	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AC2117_00462	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AC2117_00463	COG0339	signal peptide processing
AC2117_00464	COG0557	exoribonuclease II activity
AC2117_00473	COG0179	Fumarylacetoacetate (FAA) hydrolase
AC2117_00474	COG1295	ribonuclease BN
AC2117_00481	COG1702	phosphate starvation-inducible protein PhoH
AC2117_00483	COG0739	heme binding
AC2117_00483	COG0741	lytic transglycosylase activity
AC2117_00483	COG1196	nuclear chromosome segregation
AC2117_00489	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AC2117_00490	COG1183	phosphatidylcholine synthase activity
AC2117_00500	COG1960	acyl-CoA dehydrogenase activity
AC2117_00501	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AC2117_00505	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AC2117_00506	COG1960	acyl-CoA dehydrogenase activity
AC2117_00510	COG2969	positive regulation of protein catabolic process
AC2117_00511	COG0625	glutathione transferase activity
AC2117_00512	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AC2117_00513	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AC2117_00515	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AC2117_00516	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AC2117_00518	COG1346	cytolysis
AC2117_00520	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AC2117_00522	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AC2117_00523	COG1408	metallophosphoesterase
AC2117_00525	COG2199	diguanylate cyclase activity
AC2117_00535	COG3453	Protein conserved in bacteria
AC2117_00535	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AC2117_00538	COG1607	acyl-coa hydrolase
AC2117_00544	COG2350	Protein conserved in bacteria
AC2117_00546	COG0613	PHP domain protein
AC2117_00547	COG3781	membrane
AC2117_00549	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AC2117_00552	COG1862	Preprotein translocase
AC2117_00557	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AC2117_00561	COG0726	polysaccharide deacetylase
AC2117_00562	COG0463	Glycosyl transferase, family 2
AC2117_00563	COG0438	transferase activity, transferring glycosyl groups
AC2117_00568	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AC2117_00576	COG0625	glutathione transferase activity
AC2117_00577	COG0583	DNA-binding transcription factor activity
AC2117_00578	COG1960	acyl-CoA dehydrogenase activity
AC2117_00579	COG1960	acyl-CoA dehydrogenase activity
AC2117_00581	COG2205	protein histidine kinase activity
AC2117_00582	COG0745	RESPONSE REGULATOR receiver
AC2117_00584	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
AC2117_00588	COG2096	Adenosyltransferase
AC2117_00589	COG4206	TonB-dependent receptor
AC2117_00592	COG0133	tryptophan synthase activity
AC2117_00599	COG0285	dihydrofolate synthase activity
AC2117_00604	COG0450	alkyl hydroperoxide reductase
AC2117_00607	COG0477	Major facilitator Superfamily
AC2117_00608	COG1272	protein, Hemolysin III
AC2117_00610	COG2153	protein acetylation
AC2117_00614	COG0183	Belongs to the thiolase family
AC2117_00615	COG2207	Transcriptional regulator
AC2117_00619	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AC2117_00622	COG0183	Belongs to the thiolase family
AC2117_00624	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AC2117_00624	COG2885	chlorophyll binding
AC2117_00627	COG1690	Belongs to the RtcB family
AC2117_00628	COG0833	amino acid
AC2117_00630	COG2233	PERMEase
AC2117_00634	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AC2117_00636	COG2094	Belongs to the DNA glycosylase MPG family
AC2117_00637	COG4772	TonB-dependent receptor
AC2117_00638	COG1902	pentaerythritol trinitrate reductase activity
AC2117_00641	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AC2117_00642	COG0354	folic acid binding
AC2117_00645	COG2233	PERMEase
AC2117_00646	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AC2117_00647	COG0251	oxidation-reduction process
AC2117_00648	COG1335	isochorismatase
AC2117_00649	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AC2117_00650	COG0778	Nitroreductase
AC2117_00651	COG0596	Alpha beta hydrolase
AC2117_00652	COG3189	MarR family transcriptional regulator
AC2117_00653	COG2824	Alkylphosphonate utilization operon protein PhnA
AC2117_00654	COG3422	double-strand break repair
AC2117_00662	COG0840	transmembrane signaling receptor activity
AC2117_00668	COG2832	Protein of unknown function (DUF454)
AC2117_00677	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AC2117_00679	COG1289	transmembrane transporter activity
AC2117_00680	COG2814	Major facilitator Superfamily
AC2117_00683	COG1115	amino acid carrier protein
AC2117_00684	COG1752	Esterase of the alpha-beta hydrolase superfamily
AC2117_00685	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AC2117_00686	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AC2117_00693	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AC2117_00695	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AC2117_00696	COG1077	Cell shape determining protein MreB Mrl
AC2117_00697	COG1792	Involved in formation and maintenance of cell shape
AC2117_00698	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AC2117_00699	COG0424	maF-like protein
AC2117_00700	COG1530	ribonuclease E activity
AC2117_00702	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AC2117_00706	COG2249	NAD(P)H dehydrogenase (quinone) activity
AC2117_00720	COG1113	amino acid transport
AC2117_00722	COG0142	geranyltranstransferase activity
AC2117_00723	COG2315	Protein conserved in bacteria
AC2117_00726	COG1752	Esterase of the alpha-beta hydrolase superfamily
AC2117_00730	COG2194	sulfuric ester hydrolase activity
AC2117_00731	COG0745	RESPONSE REGULATOR receiver
AC2117_00732	COG0642	Histidine kinase
AC2117_00734	COG0004	ammonium transporteR
AC2117_00735	COG0583	DNA-binding transcription factor activity
AC2117_00739	COG0525	valine-tRNA ligase activity
AC2117_00741	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_00743	COG0393	Putative heavy-metal-binding
AC2117_00744	COG0393	Putative heavy-metal-binding
AC2117_00745	COG1538	Outer membrane efflux protein
AC2117_00747	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AC2117_00748	COG0671	phosphoesterase, PA-phosphatase related
AC2117_00753	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AC2117_00756	COG1648	precorrin-2 dehydrogenase activity
AC2117_00756	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AC2117_00757	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AC2117_00762	COG1733	regulation of RNA biosynthetic process
AC2117_00764	COG0531	amino acid
AC2117_00767	COG0321	lipoyl(octanoyl) transferase activity
AC2117_00768	COG2921	Belongs to the UPF0250 family
AC2117_00776	COG2009	succinate dehydrogenase
AC2117_00777	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AC2117_00778	COG1053	succinate dehydrogenase
AC2117_00779	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AC2117_00782	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AC2117_00786	COG2354	Protein conserved in bacteria
AC2117_00787	COG2321	neutral zinc metallopeptidase
AC2117_00791	COG2843	Capsule synthesis protein
AC2117_00794	COG0589	response to stress
AC2117_00798	COG0505	Belongs to the CarA family
AC2117_00803	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AC2117_00804	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AC2117_00812	COG2264	protein methyltransferase activity
AC2117_00814	COG0477	Major facilitator Superfamily
AC2117_00815	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AC2117_00819	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AC2117_00824	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AC2117_00825	COG0584	glycerophosphoryl diester phosphodiesterase
AC2117_00829	COG0741	lytic transglycosylase activity
AC2117_00833	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AC2117_00847	COG0778	Nitroreductase
AC2117_00848	COG1929	Belongs to the glycerate kinase type-1 family
AC2117_00850	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AC2117_00856	COG1115	amino acid carrier protein
AC2117_00857	COG1113	amino acid transport
AC2117_00859	COG0019	diaminopimelate decarboxylase activity
AC2117_00862	COG1280	lysine exporter protein (LysE YggA)
AC2117_00863	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AC2117_00869	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AC2117_00874	COG0697	spore germination
AC2117_00875	COG4591	ABC-type transport system involved in lipoprotein release permease component
AC2117_00876	COG1136	(ABC) transporter
AC2117_00877	COG0658	competence protein
AC2117_00877	COG2333	competence protein COMEC
AC2117_00879	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AC2117_00879	COG0616	signal peptide processing
AC2117_00881	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AC2117_00883	COG0628	permease
AC2117_00890	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AC2117_00894	COG0823	Involved in the tonB-independent uptake of proteins
AC2117_00898	COG0824	Thioesterase
AC2117_00902	COG0047	phosphoribosylformylglycinamidine synthase activity
AC2117_00902	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AC2117_00903	COG2814	Major facilitator Superfamily
AC2117_00905	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AC2117_00906	COG1024	Enoyl-CoA hydratase
AC2117_00907	COG1051	belongs to the nudix hydrolase family
AC2117_00907	COG1056	cytidyltransferase-related domain
AC2117_00910	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AC2117_00913	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AC2117_00916	COG4625	pathogenesis
AC2117_00917	COG0583	DNA-binding transcription factor activity
AC2117_00918	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AC2117_00919	COG4208	sulfate ABC transporter
AC2117_00920	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AC2117_00922	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AC2117_00923	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AC2117_00924	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AC2117_00928	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AC2117_00930	COG0481	GTPase activity
AC2117_00931	COG0681	Belongs to the peptidase S26 family
AC2117_00933	COG0571	ribonuclease III activity
AC2117_00934	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AC2117_00937	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AC2117_00939	COG4221	oxidoreductase activity
AC2117_00948	COG0556	nucleotide-excision repair
AC2117_00959	COG2070	2-Nitropropane dioxygenase
AC2117_00965	COG1215	transferase activity, transferring glycosyl groups
AC2117_00968	COG0415	Belongs to the DNA photolyase family
AC2117_00970	COG1252	NADH dehydrogenase
AC2117_00971	COG1686	Belongs to the peptidase S11 family
AC2117_00974	COG1187	pseudouridine synthase activity
AC2117_00977	COG0477	Major facilitator Superfamily
AC2117_00978	COG0583	DNA-binding transcription factor activity
AC2117_00981	COG0612	Peptidase, M16
AC2117_00986	COG0352	thiamine-phosphate diphosphorylase activity
AC2117_00993	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AC2117_00998	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AC2117_00999	COG0076	glutamate decarboxylase activity
AC2117_01001	COG1522	sequence-specific DNA binding
AC2117_01002	COG3961	Belongs to the TPP enzyme family
AC2117_01003	COG1113	amino acid transport
AC2117_01004	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AC2117_01005	COG0573	inorganic phosphate transmembrane transporter activity
AC2117_01007	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AC2117_01008	COG0616	signal peptide processing
AC2117_01016	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AC2117_01017	COG1686	Belongs to the peptidase S11 family
AC2117_01021	COG1388	LysM domain
AC2117_01021	COG4942	peptidase
AC2117_01022	COG0583	DNA-binding transcription factor activity
AC2117_01023	COG1067	ATP-dependent peptidase activity
AC2117_01027	COG0254	rRNA binding
AC2117_01031	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AC2117_01032	COG1966	Carbon starvation protein
AC2117_01033	COG2879	small protein
AC2117_01035	COG1278	Cold shock
AC2117_01038	COG2801	Transposase and inactivated derivatives
AC2117_01041	COG2423	ornithine cyclodeaminase activity
AC2117_01043	COG2964	Protein conserved in bacteria
AC2117_01044	COG1741	Belongs to the pirin family
AC2117_01047	COG3739	integral membrane protein
AC2117_01055	COG0512	Glutamine amidotransferase of anthranilate synthase
AC2117_01058	COG3104	oligopeptide transport
AC2117_01061	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AC2117_01068	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AC2117_01069	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AC2117_01070	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AC2117_01072	COG0280	phosphate acetyltransferase
AC2117_01072	COG0281	malic enzyme
AC2117_01074	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AC2117_01075	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AC2117_01076	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AC2117_01079	COG1960	acyl-CoA dehydrogenase activity
AC2117_01080	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AC2117_01081	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AC2117_01084	COG2223	nitrite transmembrane transporter activity
AC2117_01086	COG0024	Methionine aminopeptidase
AC2117_01088	COG0052	Belongs to the universal ribosomal protein uS2 family
AC2117_01091	COG2207	Transcriptional regulator
AC2117_01096	COG2951	lytic endotransglycosylase activity
AC2117_01097	COG0772	Belongs to the SEDS family
AC2117_01100	COG0842	Transport permease protein
AC2117_01101	COG1131	(ABC) transporter
AC2117_01107	COG1538	Outer membrane efflux protein
AC2117_01109	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AC2117_01112	COG4215	(ABC) transporter
AC2117_01113	COG4160	amino acid transport
AC2117_01114	COG4598	ABC transporter
AC2117_01116	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AC2117_01117	COG0384	phenazine biosynthesis protein PhzF
AC2117_01119	COG1720	tRNA m6t6A37 methyltransferase activity
AC2117_01121	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AC2117_01123	COG0745	RESPONSE REGULATOR receiver
AC2117_01124	COG0642	Histidine kinase
AC2117_01126	COG0494	nUDIX hydrolase
AC2117_01128	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AC2117_01129	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AC2117_01130	COG3139	Protein of unknown function (DUF1315)
AC2117_01132	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AC2117_01133	COG1301	dicarboxylic acid transport
AC2117_01134	COG1960	acyl-CoA dehydrogenase activity
AC2117_01136	COG2819	hydrolase of the alpha beta superfamily
AC2117_01138	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AC2117_01140	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AC2117_01141	COG2195	Cleaves the N-terminal amino acid of tripeptides
AC2117_01142	COG1234	tRNA 3'-trailer cleavage
AC2117_01148	COG2363	Small membrane protein
AC2117_01152	COG0513	Belongs to the DEAD box helicase family
AC2117_01154	COG0778	Nitroreductase
AC2117_01160	COG1286	toxin biosynthetic process
AC2117_01165	COG4783	chaperone-mediated protein folding
AC2117_01166	COG1610	YqeY-like protein
AC2117_01167	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AC2117_01172	COG0515	serine threonine protein kinase
AC2117_01172	COG2815	serine threonine protein kinase
AC2117_01178	COG1278	Cold shock
AC2117_01183	COG0534	Mate efflux family protein
AC2117_01187	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AC2117_01188	COG4221	oxidoreductase activity
AC2117_01189	COG1733	regulation of RNA biosynthetic process
AC2117_01190	COG2085	NADP oxidoreductase coenzyme F420-dependent
AC2117_01193	COG1309	transcriptional regulator
AC2117_01196	COG3243	poly(R)-hydroxyalkanoic acid synthase
AC2117_01197	COG0786	glutamate:sodium symporter activity
AC2117_01198	COG0475	glutathione-regulated potassium exporter activity
AC2117_01198	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AC2117_01199	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_01206	COG2995	paraquat-inducible protein a
AC2117_01207	COG3008	intermembrane lipid transfer
AC2117_01207	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AC2117_01209	COG2351	hydroxyisourate hydrolase activity
AC2117_01217	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AC2117_01219	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AC2117_01220	COG0642	Histidine kinase
AC2117_01221	COG0745	RESPONSE REGULATOR receiver
AC2117_01226	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AC2117_01227	COG1794	racemase activity, acting on amino acids and derivatives
AC2117_01229	COG2175	clavaminate synthase activity
AC2117_01230	COG3246	L-lysine catabolic process to acetate
AC2117_01234	COG2855	membrane
AC2117_01244	COG1301	dicarboxylic acid transport
AC2117_01247	COG2011	ABC-type metal ion transport system permease component
AC2117_01248	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AC2117_01249	COG1464	Belongs to the NlpA lipoprotein family
AC2117_01250	COG0151	Belongs to the GarS family
AC2117_01251	COG0138	bifunctional purine biosynthesis protein purh
AC2117_01252	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AC2117_01258	COG2308	Evidence 4 Homologs of previously reported genes of
AC2117_01260	COG1305	Transglutaminase-like
AC2117_01262	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AC2117_01263	COG0305	Participates in initiation and elongation during chromosome replication
AC2117_01268	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AC2117_01270	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AC2117_01271	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AC2117_01276	COG1649	PFAM Uncharacterised BCR, COG1649
AC2117_01276	COG0726	polysaccharide deacetylase
AC2117_01277	COG1215	transferase activity, transferring glycosyl groups
AC2117_01278	COG3658	cytochrome
AC2117_01280	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AC2117_01283	COG0583	DNA-binding transcription factor activity
AC2117_01287	COG2890	protein-(glutamine-N5) methyltransferase activity
AC2117_01288	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AC2117_01289	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AC2117_01292	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AC2117_01295	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AC2117_01298	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
AC2117_01299	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
AC2117_01301	COG2205	protein histidine kinase activity
AC2117_01302	COG0745	RESPONSE REGULATOR receiver
AC2117_01303	COG0174	glutamine synthetase
AC2117_01307	COG0729	surface antigen
AC2117_01309	COG2706	6-phosphogluconolactonase activity
AC2117_01314	COG0471	metal ion transport
AC2117_01316	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AC2117_01317	COG2814	Major facilitator Superfamily
AC2117_01319	COG0583	DNA-binding transcription factor activity
AC2117_01322	COG1187	pseudouridine synthase activity
AC2117_01326	COG0802	atpase or kinase
AC2117_01327	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AC2117_01329	COG1923	regulation of RNA biosynthetic process
AC2117_01330	COG0697	spore germination
AC2117_01333	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AC2117_01335	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AC2117_01336	COG0519	Catalyzes the synthesis of GMP from XMP
AC2117_01336	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AC2117_01337	COG4302	ethanolamine ammonia-lyase activity
AC2117_01338	COG4303	Ethanolamine ammonia lyase large subunit
AC2117_01339	COG0531	amino acid
AC2117_01343	COG1454	alcohol dehydrogenase
AC2117_01344	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AC2117_01346	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AC2117_01350	COG0308	aminopeptidase N
AC2117_01358	COG1605	Chorismate mutase
AC2117_01360	COG2801	Transposase and inactivated derivatives
AC2117_01363	COG4772	TonB-dependent receptor
AC2117_01364	COG4774	siderophore transport
AC2117_01374	COG1733	regulation of RNA biosynthetic process
AC2117_01379	COG0583	DNA-binding transcription factor activity
AC2117_01382	COG3111	PFAM Bacterial OB fold (BOF) protein
AC2117_01386	COG0589	response to stress
AC2117_01390	COG3135	benzoate transporter
AC2117_01391	COG1522	sequence-specific DNA binding
AC2117_01394	COG0583	DNA-binding transcription factor activity
AC2117_01396	COG0183	Belongs to the thiolase family
AC2117_01397	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_01404	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AC2117_01406	COG0824	Thioesterase
AC2117_01407	COG1454	alcohol dehydrogenase
AC2117_01414	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AC2117_01420	COG0069	glutamate synthase activity
AC2117_01427	COG1309	transcriptional regulator
AC2117_01428	COG2814	Major facilitator Superfamily
AC2117_01431	COG0511	ligase activity, forming carbon-carbon bonds
AC2117_01436	COG4264	IucA IucC family
AC2117_01438	COG4264	IucA IucC family
AC2117_01439	COG2423	ornithine cyclodeaminase activity
AC2117_01440	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AC2117_01441	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AC2117_01441	COG1116	anion transmembrane transporter activity
AC2117_01444	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AC2117_01444	COG2146	nitrite reductase [NAD(P)H] activity
AC2117_01445	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AC2117_01446	COG0243	molybdopterin cofactor binding
AC2117_01448	COG0243	molybdopterin cofactor binding
AC2117_01452	COG0315	cyclic pyranopterin monophosphate synthase activity
AC2117_01452	COG0521	Mo-molybdopterin cofactor biosynthetic process
AC2117_01453	COG0303	'Molybdopterin
AC2117_01455	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AC2117_01456	COG0697	spore germination
AC2117_01461	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AC2117_01465	COG1335	isochorismatase
AC2117_01474	COG2204	response regulator
AC2117_01475	COG3852	Histidine kinase
AC2117_01479	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AC2117_01480	COG0575	Belongs to the CDS family
AC2117_01483	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AC2117_01487	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AC2117_01491	COG2137	regulation of response to DNA damage stimulus
AC2117_01493	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AC2117_01494	COG1011	Hydrolase
AC2117_01508	COG0270	DNA (cytosine-5-)-methyltransferase activity
AC2117_01510	COG1484	DNA-dependent DNA replication
AC2117_01522	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AC2117_01526	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AC2117_01527	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_01528	COG3118	belongs to the thioredoxin family
AC2117_01529	COG1902	pentaerythritol trinitrate reductase activity
AC2117_01532	COG1294	oxidase, subunit
AC2117_01533	COG1271	oxidase subunit
AC2117_01570	COG3550	peptidyl-serine autophosphorylation
AC2117_01609	COG1522	sequence-specific DNA binding
AC2117_01611	COG1113	amino acid transport
AC2117_01615	COG0659	secondary active sulfate transmembrane transporter activity
AC2117_01619	COG5001	Diguanylate cyclase
AC2117_01619	COG3300	MHYT domain
AC2117_01622	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AC2117_01622	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AC2117_01622	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AC2117_01623	COG1105	Belongs to the carbohydrate kinase PfkB family
AC2117_01624	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AC2117_01624	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AC2117_01630	COG0024	Methionine aminopeptidase
AC2117_01631	COG0583	DNA-binding transcription factor activity
AC2117_01634	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AC2117_01635	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AC2117_01635	COG0517	IMP dehydrogenase activity
AC2117_01640	COG0552	protein localization to endoplasmic reticulum
AC2117_01645	COG4890	Cyd operon protein YbgT
AC2117_01646	COG1294	oxidase, subunit
AC2117_01649	COG1585	Membrane protein implicated in regulation of membrane protease activity
AC2117_01651	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AC2117_01655	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AC2117_01656	COG0569	domain protein
AC2117_01657	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AC2117_01663	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AC2117_01664	COG0542	response to heat
AC2117_01666	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AC2117_01669	COG0446	pyridine nucleotide-disulphide oxidoreductase
AC2117_01669	COG1902	pentaerythritol trinitrate reductase activity
AC2117_01677	COG0148	phosphopyruvate hydratase activity
AC2117_01678	COG2323	membrane
AC2117_01681	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AC2117_01683	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AC2117_01684	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AC2117_01685	COG0183	Belongs to the thiolase family
AC2117_01686	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AC2117_01687	COG0596	Alpha beta hydrolase
AC2117_01688	COG2271	Major facilitator Superfamily
AC2117_01689	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AC2117_01690	COG3485	protocatechuate 3,4-dioxygenase
AC2117_01691	COG3485	protocatechuate 3,4-dioxygenase
AC2117_01692	COG0710	3-dehydroquinate dehydratase activity
AC2117_01693	COG3420	alginic acid biosynthetic process
AC2117_01694	COG3659	wide pore channel activity
AC2117_01695	COG4993	Dehydrogenase
AC2117_01700	COG1414	Transcriptional regulator
AC2117_01701	COG0583	DNA-binding transcription factor activity
AC2117_01702	COG1960	acyl-CoA dehydrogenase activity
AC2117_01707	COG2814	Major facilitator Superfamily
AC2117_01709	COG0154	amidase activity
AC2117_01715	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_01717	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AC2117_01719	COG3733	amine oxidase
AC2117_01721	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_01723	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AC2117_01724	COG0183	Belongs to the thiolase family
AC2117_01725	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AC2117_01726	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AC2117_01728	COG4829	muconolactone delta-isomerase
AC2117_01729	COG4948	Mandelate Racemase Muconate Lactonizing
AC2117_01730	COG0583	DNA-binding transcription factor activity
AC2117_01732	COG2186	Transcriptional regulator
AC2117_01736	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_01741	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AC2117_01748	COG1309	transcriptional regulator
AC2117_01752	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_01753	COG0129	dihydroxy-acid dehydratase activity
AC2117_01755	COG0583	DNA-binding transcription factor activity
AC2117_01756	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AC2117_01758	COG2084	Dehydrogenase
AC2117_01760	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_01764	COG1902	pentaerythritol trinitrate reductase activity
AC2117_01765	COG1733	regulation of RNA biosynthetic process
AC2117_01766	COG1733	regulation of RNA biosynthetic process
AC2117_01767	COG0702	epimerase
AC2117_01781	COG1566	PFAM secretion protein HlyD family protein
AC2117_01786	COG2015	COG2015, Alkyl sulfatase and related hydrolases
AC2117_01789	COG1278	Cold shock
AC2117_01791	COG0583	DNA-binding transcription factor activity
AC2117_01792	COG2207	Transcriptional regulator
AC2117_01793	COG1064	alcohol dehydrogenase
AC2117_01797	COG1120	ATPase activity
AC2117_01803	COG4221	oxidoreductase activity
AC2117_01804	COG0702	epimerase
AC2117_01805	COG1902	pentaerythritol trinitrate reductase activity
AC2117_01806	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AC2117_01807	COG1280	lysine exporter protein (LysE YggA)
AC2117_01809	COG1301	dicarboxylic acid transport
AC2117_01811	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AC2117_01821	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AC2117_01832	COG0477	Major facilitator Superfamily
AC2117_01833	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_01834	COG0371	Dehydrogenase
AC2117_01836	COG0583	DNA-binding transcription factor activity
AC2117_01837	COG4628	conserved protein (DUF2132)
AC2117_01840	COG3539	Fimbrial protein
AC2117_01845	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
AC2117_01847	COG0753	catalase activity
AC2117_01853	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AC2117_01855	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AC2117_01866	COG4771	TonB-dependent receptor
AC2117_01867	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AC2117_01868	COG3433	isochorismatase activity
AC2117_01868	COG1535	isochorismatase
AC2117_01869	COG1021	2,3-dihydroxybenzoate-AMP ligase
AC2117_01870	COG1169	isochorismate synthase
AC2117_01871	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_01873	COG3251	PFAM MbtH domain protein
AC2117_01874	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AC2117_01879	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AC2117_01880	COG4149	molybdate abc transporter
AC2117_01881	COG0725	ABC transporter, periplasmic molybdate-binding protein
AC2117_01883	COG4638	Rieske (2fe-2S)
AC2117_01884	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
AC2117_01885	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AC2117_01885	COG0543	2 iron, 2 sulfur cluster binding
AC2117_01888	COG2207	Transcriptional regulator
AC2117_01889	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_01890	COG2610	gluconate transmembrane transporter activity
AC2117_01894	COG0583	DNA-binding transcription factor activity
AC2117_01897	COG2031	fatty acid transporter
AC2117_01898	COG0183	Belongs to the thiolase family
AC2117_01899	COG0583	DNA-binding transcription factor activity
AC2117_01900	COG0583	DNA-binding transcription factor activity
AC2117_01903	COG1027	Aspartate ammonia-lyase
AC2117_01905	COG0477	Major facilitator Superfamily
AC2117_01909	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AC2117_01910	COG4521	taurine ABC transporter
AC2117_01912	COG2081	HI0933 family
AC2117_01915	COG2207	Transcriptional regulator
AC2117_01915	COG3708	Transcriptional regulator
AC2117_01918	COG0730	response to heat
AC2117_01922	COG3781	membrane
AC2117_01923	COG1063	alcohol dehydrogenase
AC2117_01925	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AC2117_01926	COG0508	dehydrogenase complex catalyzes the overall conversion of
AC2117_01927	COG0022	dehydrogenase e1 component
AC2117_01928	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AC2117_01929	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AC2117_01932	COG3706	GGDEF domain
AC2117_01936	COG0133	tryptophan synthase activity
AC2117_01938	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AC2117_01944	COG0583	DNA-binding transcription factor activity
AC2117_01945	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AC2117_01947	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AC2117_01958	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AC2117_01959	COG4773	Receptor
AC2117_01963	COG0730	response to heat
AC2117_01964	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AC2117_01971	COG0546	phosphoglycolate phosphatase activity
AC2117_01973	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AC2117_01976	COG1960	acyl-CoA dehydrogenase activity
AC2117_01977	COG1960	acyl-CoA dehydrogenase activity
AC2117_01978	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AC2117_01979	COG2207	Transcriptional regulator
AC2117_01980	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AC2117_01981	COG0776	regulation of translation
AC2117_01986	COG0822	iron-sulfur transferase activity
AC2117_01987	COG0316	Belongs to the HesB IscA family
AC2117_01993	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AC2117_01997	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AC2117_01998	COG0702	epimerase
AC2117_02004	COG4172	Belongs to the ABC transporter superfamily
AC2117_02006	COG0601	transmembrane transport
AC2117_02007	COG0339	signal peptide processing
AC2117_02008	COG4166	transmembrane transport
AC2117_02015	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AC2117_02016	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AC2117_02019	COG2431	L-lysine efflux transmembrane transporter activity
AC2117_02022	COG0776	regulation of translation
AC2117_02026	COG0590	tRNA wobble adenosine to inosine editing
AC2117_02035	COG0084	hydrolase, TatD family'
AC2117_02039	COG1663	tetraacyldisaccharide 4'-kinase activity
AC2117_02040	COG1132	(ABC) transporter
AC2117_02042	COG0811	peptide transport
AC2117_02043	COG1475	DNA binding
AC2117_02044	COG1192	Involved in chromosome partitioning
AC2117_02046	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AC2117_02049	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AC2117_02050	COG0191	fructose-bisphosphate aldolase activity
AC2117_02054	COG0424	maF-like protein
AC2117_02055	COG2850	peptidyl-arginine hydroxylation
AC2117_02057	COG0640	Transcriptional regulator
AC2117_02059	COG3619	membrane
AC2117_02060	COG3122	Protein conserved in bacteria
AC2117_02061	COG1132	(ABC) transporter
AC2117_02065	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AC2117_02066	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AC2117_02068	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AC2117_02068	COG0506	proline dehydrogenase activity
AC2117_02068	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AC2117_02072	COG3698	Phosphodiester glycosidase
AC2117_02074	COG2353	YceI-like domain
AC2117_02076	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AC2117_02085	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AC2117_02085	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AC2117_02090	COG3539	Fimbrial protein
AC2117_02091	COG3121	Chaperone
AC2117_02097	COG0583	DNA-binding transcription factor activity
AC2117_02098	COG0697	spore germination
AC2117_02100	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AC2117_02102	COG0583	DNA-binding transcription factor activity
AC2117_02105	COG1309	transcriptional regulator
AC2117_02108	COG1522	sequence-specific DNA binding
AC2117_02110	COG1126	abc transporter atp-binding protein
AC2117_02111	COG0765	amino acid transport
AC2117_02112	COG0765	amino acid transport
AC2117_02118	COG1464	Belongs to the NlpA lipoprotein family
AC2117_02120	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AC2117_02121	COG2011	ABC-type metal ion transport system permease component
AC2117_02122	COG0012	GTP binding
AC2117_02127	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AC2117_02134	COG2207	Transcriptional regulator
AC2117_02134	COG1917	Cupin 2, conserved barrel domain protein
AC2117_02135	COG0386	Belongs to the glutathione peroxidase family
AC2117_02137	COG0436	Aminotransferase
AC2117_02138	COG1301	dicarboxylic acid transport
AC2117_02145	COG3634	alkyl hydroperoxide reductase activity
AC2117_02148	COG0583	DNA-binding transcription factor activity
AC2117_02149	COG0431	NADPH-dependent FMN reductase
AC2117_02150	COG0798	PFAM Bile acid sodium symporter
AC2117_02152	COG0640	Transcriptional regulator
AC2117_02155	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AC2117_02157	COG0583	DNA-binding transcription factor activity
AC2117_02158	COG2175	clavaminate synthase activity
AC2117_02159	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AC2117_02160	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AC2117_02161	COG4521	taurine ABC transporter
AC2117_02163	COG0477	Major facilitator Superfamily
AC2117_02168	COG1271	oxidase subunit
AC2117_02169	COG1294	oxidase, subunit
AC2117_02171	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AC2117_02175	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AC2117_02179	COG3052	prosthetic group binding
AC2117_02180	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
AC2117_02185	COG1346	cytolysis
AC2117_02187	COG0583	DNA-binding transcription factor activity
AC2117_02188	COG0625	glutathione transferase activity
AC2117_02189	COG0625	glutathione transferase activity
AC2117_02194	COG1045	serine acetyltransferase
AC2117_02195	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AC2117_02196	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AC2117_02197	COG1280	lysine exporter protein (LysE YggA)
AC2117_02198	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AC2117_02200	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AC2117_02201	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AC2117_02203	COG0765	amino acid transport
AC2117_02204	COG0765	amino acid transport
AC2117_02205	COG2388	GCN5-related N-acetyl-transferase
AC2117_02215	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AC2117_02219	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_02231	COG0583	DNA-binding transcription factor activity
AC2117_02233	COG2814	Major facilitator Superfamily
AC2117_02236	COG0318	PFAM AMP-dependent synthetase and ligase
AC2117_02237	COG1309	transcriptional regulator
AC2117_02238	COG1960	acyl-CoA dehydrogenase activity
AC2117_02239	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AC2117_02240	COG1024	Enoyl-CoA hydratase
AC2117_02243	COG0583	DNA-binding transcription factor activity
AC2117_02246	COG1960	acyl-CoA dehydrogenase activity
AC2117_02248	COG2814	Major facilitator Superfamily
AC2117_02250	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AC2117_02251	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AC2117_02252	COG2814	Major facilitator Superfamily
AC2117_02253	COG2814	Major facilitator Superfamily
AC2117_02254	COG1960	acyl-CoA dehydrogenase activity
AC2117_02255	COG1024	Enoyl-CoA hydratase
AC2117_02256	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_02257	COG1250	3-hydroxyacyl-CoA dehydrogenase
AC2117_02258	COG0183	Belongs to the thiolase family
AC2117_02260	COG2814	Major facilitator Superfamily
AC2117_02262	COG1024	Enoyl-CoA hydratase
AC2117_02264	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AC2117_02265	COG1960	acyl-CoA dehydrogenase activity
AC2117_02266	COG2814	Major facilitator Superfamily
AC2117_02267	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AC2117_02271	COG3842	ATPase activity
AC2117_02272	COG1840	ABC-type Fe3 transport system, periplasmic component
AC2117_02274	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AC2117_02275	COG1414	Transcriptional regulator
AC2117_02277	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AC2117_02278	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_02280	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
AC2117_02281	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_02282	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AC2117_02283	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AC2117_02284	COG2267	carboxylic ester hydrolase activity
AC2117_02293	COG1760	l-serine dehydratase
AC2117_02295	COG0789	Transcriptional regulator
AC2117_02297	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AC2117_02298	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AC2117_02308	COG2885	chlorophyll binding
AC2117_02308	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AC2117_02328	COG0583	DNA-binding transcription factor activity
AC2117_02329	COG0477	Major facilitator Superfamily
AC2117_02332	COG1116	anion transmembrane transporter activity
AC2117_02333	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AC2117_02335	COG0864	Transcriptional regulator
AC2117_02337	COG1733	regulation of RNA biosynthetic process
AC2117_02338	COG2249	NAD(P)H dehydrogenase (quinone) activity
AC2117_02339	COG0439	Biotin carboxylase
AC2117_02343	COG1063	alcohol dehydrogenase
AC2117_02344	COG1250	3-hydroxyacyl-CoA dehydrogenase
AC2117_02352	COG0038	chloride channel
AC2117_02353	COG4770	biotin carboxylase activity
AC2117_02357	COG1914	H( )-stimulated, divalent metal cation uptake system
AC2117_02358	COG0583	DNA-binding transcription factor activity
AC2117_02360	COG1595	DNA-templated transcription, initiation
AC2117_02362	COG3220	belongs to the UPF0276 family
AC2117_02376	COG2814	Major facilitator Superfamily
AC2117_02378	COG0583	DNA-binding transcription factor activity
AC2117_02379	COG1309	transcriptional regulator
AC2117_02386	COG1595	DNA-templated transcription, initiation
AC2117_02387	COG3712	iron ion homeostasis
AC2117_02391	COG0402	S-adenosylhomocysteine deaminase activity
AC2117_02392	COG0583	DNA-binding transcription factor activity
AC2117_02398	COG2801	Transposase and inactivated derivatives
AC2117_02404	COG2050	protein possibly involved in aromatic compounds catabolism
AC2117_02406	COG3327	negative regulation of DNA-templated transcription, initiation
AC2117_02407	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
AC2117_02408	COG0183	Belongs to the thiolase family
AC2117_02409	COG1250	3-hydroxyacyl-CoA dehydrogenase
AC2117_02410	COG1024	Enoyl-CoA hydratase
AC2117_02411	COG1024	Enoyl-CoA hydratase
AC2117_02412	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AC2117_02413	COG2151	metal-sulfur cluster biosynthetic enzyme
AC2117_02414	COG3396	Phenylacetate-CoA oxygenase
AC2117_02415	COG3460	Phenylacetate-CoA oxygenase
AC2117_02416	COG3396	Phenylacetate-CoA oxygenase
AC2117_02417	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_02417	COG2030	dehydratase
AC2117_02420	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AC2117_02423	COG4122	O-methyltransferase activity
AC2117_02429	COG1538	Outer membrane efflux protein
AC2117_02430	COG1137	ATPase activity
AC2117_02431	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AC2117_02433	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AC2117_02442	COG1733	regulation of RNA biosynthetic process
AC2117_02443	COG2814	Major facilitator Superfamily
AC2117_02449	COG0668	transmembrane transport
AC2117_02460	COG2226	methyltransferase
AC2117_02461	COG1011	Hydrolase
AC2117_02466	COG1278	Cold shock
AC2117_02467	COG1560	Kdo2-lipid A biosynthetic process
AC2117_02468	COG1280	lysine exporter protein (LysE YggA)
AC2117_02475	COG1570	exodeoxyribonuclease VII activity
AC2117_02484	COG0583	DNA-binding transcription factor activity
AC2117_02485	COG4638	Rieske (2fe-2S)
AC2117_02486	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
AC2117_02487	COG0543	2 iron, 2 sulfur cluster binding
AC2117_02487	COG0633	Ferredoxin
AC2117_02488	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_02489	COG3135	benzoate transporter
AC2117_02490	COG2814	Major facilitator Superfamily
AC2117_02493	COG1643	Atp-dependent helicase
AC2117_02494	COG0450	alkyl hydroperoxide reductase
AC2117_02498	COG3634	alkyl hydroperoxide reductase activity
AC2117_02502	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AC2117_02503	COG0625	glutathione transferase activity
AC2117_02505	COG2885	chlorophyll binding
AC2117_02512	COG0542	response to heat
AC2117_02516	COG1765	OsmC-like protein
AC2117_02518	COG0667	Aldo Keto reductase
AC2117_02521	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AC2117_02523	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AC2117_02527	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AC2117_02529	COG3038	cytochrome b561
AC2117_02530	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AC2117_02531	COG2252	PERMEase
AC2117_02533	COG1741	Belongs to the pirin family
AC2117_02534	COG1309	transcriptional regulator
AC2117_02537	COG2072	flavoprotein involved in K transport
AC2117_02538	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AC2117_02544	COG1944	ATP diphosphatase activity
AC2117_02548	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AC2117_02552	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AC2117_02555	COG2814	Major facilitator Superfamily
AC2117_02556	COG1024	Enoyl-CoA hydratase
AC2117_02557	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_02559	COG1960	acyl-CoA dehydrogenase activity
AC2117_02564	COG2186	Transcriptional regulator
AC2117_02565	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_02567	COG4948	Mandelate Racemase Muconate Lactonizing
AC2117_02568	COG2271	Major facilitator Superfamily
AC2117_02569	COG2721	sulfolactate sulfo-lyase activity
AC2117_02570	COG0697	spore germination
AC2117_02574	COG1113	amino acid transport
AC2117_02578	COG1012	belongs to the aldehyde dehydrogenase family
AC2117_02582	COG0531	amino acid
AC2117_02584	COG1113	amino acid transport
AC2117_02589	COG1309	transcriptional regulator
AC2117_02592	COG4269	membrane
AC2117_02596	COG0446	pyridine nucleotide-disulphide oxidoreductase
AC2117_02596	COG1902	pentaerythritol trinitrate reductase activity
AC2117_02598	COG2203	Gaf domain
AC2117_02598	COG3706	GGDEF domain
AC2117_02598	COG4251	negative regulation of phosphorylation
AC2117_02598	COG5001	Diguanylate cyclase
AC2117_02600	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AC2117_02605	COG4172	Belongs to the ABC transporter superfamily
AC2117_02606	COG4239	(ABC) transporter, permease
AC2117_02607	COG4174	ABC transporter (Permease)
AC2117_02608	COG4166	transmembrane transport
AC2117_02609	COG1388	LysM domain
AC2117_02609	COG1388	LysM domain
AC2117_02609	COG0741	lytic transglycosylase activity
AC2117_02609	COG0741	lytic transglycosylase activity
AC2117_02610	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AC2117_02617	COG0583	DNA-binding transcription factor activity
AC2117_02618	COG1279	arginine transmembrane transporter activity
AC2117_02620	COG0789	Transcriptional regulator
AC2117_02622	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AC2117_02623	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AC2117_02624	COG0006	proline dipeptidase activity
AC2117_02657	COG3566	protein conserved in bacteria
AC2117_02660	COG3567	Phage-associated protein, HI1409 family
AC2117_02661	COG5410	chromosome segregation
AC2117_02685	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AC2117_02688	COG3384	dioxygenase
AC2117_02690	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AC2117_02691	COG2878	Part of a membrane complex involved in electron transport
AC2117_02692	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AC2117_02697	COG0768	penicillin binding
AC2117_02698	COG0742	ribosomal rna small subunit methyltransferase
AC2117_02701	COG0830	nickel cation binding
AC2117_02703	COG0804	urea catabolic process
AC2117_02708	COG3015	lipoprotein NlpE involved in copper resistance
AC2117_02711	COG1253	flavin adenine dinucleotide binding
AC2117_02712	COG2851	Citrate transporter
AC2117_02723	COG1773	rubredoxin
AC2117_02724	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AC2117_02726	COG0583	DNA-binding transcription factor activity
AC2117_02731	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AC2117_02732	COG4181	ATPase activity
AC2117_02741	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AC2117_02745	COG0306	phosphate transporter
AC2117_02748	COG3958	Transketolase
AC2117_02749	COG3959	Transketolase, thiamine diphosphate binding domain
AC2117_02750	COG2271	Major facilitator Superfamily
AC2117_02751	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_02752	COG0583	DNA-binding transcription factor activity
AC2117_02755	COG2223	nitrite transmembrane transporter activity
AC2117_02757	COG2066	Belongs to the glutaminase family
AC2117_02758	COG0242	peptide deformylase activity
AC2117_02759	COG0477	Major facilitator Superfamily
AC2117_02761	COG0028	Belongs to the TPP enzyme family
AC2117_02764	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_02765	COG2267	carboxylic ester hydrolase activity
AC2117_02767	COG2271	Major facilitator Superfamily
AC2117_02774	COG1414	Transcriptional regulator
AC2117_02779	COG1024	Enoyl-CoA hydratase
AC2117_02781	COG1309	transcriptional regulator
AC2117_02783	COG1215	transferase activity, transferring glycosyl groups
AC2117_02784	COG0726	polysaccharide deacetylase
AC2117_02784	COG1649	PFAM Uncharacterised BCR, COG1649
AC2117_02786	COG4681	YaeQ
AC2117_02788	COG0523	cobalamin synthesis protein
AC2117_02790	COG1607	acyl-coa hydrolase
AC2117_02792	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AC2117_02793	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AC2117_02794	COG1309	transcriptional regulator
AC2117_02799	COG2040	homocysteine
AC2117_02800	COG0531	amino acid
AC2117_02811	COG1595	DNA-templated transcription, initiation
AC2117_02813	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AC2117_02814	COG0477	Major facilitator Superfamily
AC2117_02816	COG2801	Transposase and inactivated derivatives
AC2117_02826	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AC2117_02826	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AC2117_02829	COG1401	restriction endodeoxyribonuclease activity
AC2117_02832	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
AC2117_02834	COG0405	Gamma-glutamyltransferase
AC2117_02835	COG2814	Major facilitator Superfamily
AC2117_02836	COG1566	PFAM secretion protein HlyD family protein
AC2117_02837	COG2050	protein possibly involved in aromatic compounds catabolism
AC2117_02843	COG0420	3'-5' exonuclease activity
AC2117_02850	COG0735	belongs to the Fur family
AC2117_02851	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AC2117_02852	COG2914	Belongs to the UPF0125 (RnfH) family
AC2117_02855	COG0121	glutamine amidotransferase
AC2117_02858	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AC2117_02860	COG0210	DNA helicase
AC2117_02861	COG2885	chlorophyll binding
AC2117_02862	COG0204	Acyl-transferase
AC2117_02868	COG1280	lysine exporter protein (LysE YggA)
AC2117_02869	COG1674	ftsk spoiiie
AC2117_02870	COG0492	ferredoxin-NADP+ reductase activity
AC2117_02872	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AC2117_02874	COG0456	acetyltransferase
AC2117_02877	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AC2117_02878	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AC2117_02879	COG0049	tRNA binding
AC2117_02880	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AC2117_02885	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AC2117_02885	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AC2117_02891	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AC2117_02899	COG0358	DNA primase activity
AC2117_02902	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
AC2117_02907	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AC2117_02914	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AC2117_02916	COG0351	phosphomethylpyrimidine kinase
AC2117_02916	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AC2117_02916	COG0352	thiamine-phosphate diphosphorylase activity
AC2117_02917	COG1652	LysM domain
AC2117_02922	COG1399	metal-binding, possibly nucleic acid-binding protein
AC2117_02923	COG3101	peptidyl-lysine hydroxylation
AC2117_02924	COG0009	L-threonylcarbamoyladenylate synthase
AC2117_02925	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AC2117_02926	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AC2117_02929	COG4106	trans-aconitate 2-methyltransferase activity
AC2117_02932	COG2226	methyltransferase
AC2117_02932	COG0596	Alpha beta hydrolase
AC2117_02932	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AC2117_02933	COG1877	trehalose-phosphatase activity
AC2117_02934	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
AC2117_02935	COG2223	nitrite transmembrane transporter activity
AC2117_02939	COG1196	nuclear chromosome segregation
AC2117_02941	COG0730	response to heat
AC2117_02944	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AC2117_02946	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AC2117_02956	COG0489	protein tyrosine kinase activity
AC2117_02958	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AC2117_02958	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AC2117_02965	COG2515	1-aminocyclopropane-1-carboxylate deaminase
AC2117_02966	COG2081	HI0933 family
AC2117_02968	COG0668	transmembrane transport
AC2117_02971	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AC2117_02972	COG0583	DNA-binding transcription factor activity
AC2117_02976	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AC2117_02977	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AC2117_02980	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AC2117_02983	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
AC2117_02988	COG2199	diguanylate cyclase activity
AC2117_02990	COG2205	protein histidine kinase activity
AC2117_02991	COG0745	RESPONSE REGULATOR receiver
AC2117_02994	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AC2117_03003	COG0110	maltose O-acetyltransferase activity
AC2117_03015	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AC2117_03016	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AC2117_03018	COG0583	DNA-binding transcription factor activity
AC2117_03022	COG1473	amidohydrolase
AC2117_03030	COG0583	DNA-binding transcription factor activity
AC2117_03033	COG0583	DNA-binding transcription factor activity
AC2117_03034	COG1053	succinate dehydrogenase
AC2117_03037	COG1309	transcriptional regulator
AC2117_03038	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AC2117_03039	COG2814	Major facilitator Superfamily
AC2117_03040	COG1960	acyl-CoA dehydrogenase activity
AC2117_03041	COG0583	DNA-binding transcription factor activity
AC2117_03042	COG1063	alcohol dehydrogenase
AC2117_03048	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AC2117_03049	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AC2117_03054	COG2132	Multicopper oxidase
AC2117_03056	COG0561	phosphatase activity
AC2117_03057	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AC2117_03062	COG1214	PFAM Peptidase M22, glycoprotease
AC2117_03074	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AC2117_03075	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AC2117_03076	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AC2117_03088	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AC2117_03090	COG1846	Transcriptional regulator
AC2117_03091	COG1764	response to oxidative stress
AC2117_03099	COG0037	tRNA processing
AC2117_03101	COG0248	Ppx GppA phosphatase
AC2117_03106	COG0072	phenylalanine-tRNA ligase activity
AC2117_03111	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AC2117_03112	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AC2117_03114	COG1238	metal cluster binding
AC2117_03115	COG0625	glutathione transferase activity
AC2117_03118	COG0318	PFAM AMP-dependent synthetase and ligase
AC2117_03120	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AC2117_03124	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AC2117_03125	COG0617	tRNA 3'-terminal CCA addition
AC2117_03126	COG1555	photosystem II stabilization
AC2117_03127	COG3956	TIGRFAM MazG family protein
AC2117_03129	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AC2117_03133	COG5002	protein histidine kinase activity
AC2117_03133	COG2205	protein histidine kinase activity
AC2117_03133	COG0784	Response regulator, receiver
AC2117_03134	COG1024	Enoyl-CoA hydratase
AC2117_03135	COG2084	Dehydrogenase
AC2117_03136	COG3622	Belongs to the hyi family
AC2117_03139	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AC2117_03140	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AC2117_03141	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AC2117_03142	COG0697	spore germination
AC2117_03144	COG2814	Major facilitator Superfamily
AC2117_03149	COG2304	oxidoreductase activity
AC2117_03157	COG1358	cellular component organization or biogenesis
AC2117_03161	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AC2117_03163	COG0583	DNA-binding transcription factor activity
AC2117_03164	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AC2117_03166	COG0084	hydrolase, TatD family'
AC2117_03169	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AC2117_03175	COG2801	Transposase and inactivated derivatives
AC2117_03177	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AC2117_03178	COG0440	acetolactate synthase activity
AC2117_03179	COG0028	Belongs to the TPP enzyme family
AC2117_03184	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AC2117_03185	COG1136	(ABC) transporter
AC2117_03185	COG0577	efflux transmembrane transporter activity
AC2117_03189	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AC2117_03190	COG1162	GTPase activity
AC2117_03192	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AC2117_03196	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AC2117_03197	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_03205	COG2986	histidine ammonia-lyase
AC2117_03207	COG1216	Glycosyl transferase, family 2
AC2117_03208	COG0318	PFAM AMP-dependent synthetase and ligase
AC2117_03210	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AC2117_03211	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AC2117_03215	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AC2117_03219	COG1426	Protein conserved in bacteria
AC2117_03226	COG0793	Belongs to the peptidase S41A family
AC2117_03229	COG2267	carboxylic ester hydrolase activity
AC2117_03231	COG3265	gluconokinase activity
AC2117_03233	COG0800	Aldolase
AC2117_03235	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AC2117_03236	COG0280	phosphate acetyltransferase
AC2117_03236	COG0857	belongs to the CobB CobQ family
AC2117_03237	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AC2117_03237	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AC2117_03241	COG0740	serine-type endopeptidase activity
AC2117_03243	COG4774	siderophore transport
AC2117_03245	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AC2117_03247	COG2813	Specifically methylates the guanine in position
AC2117_03247	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AC2117_03267	COG0788	formyltetrahydrofolate deformylase activity
AC2117_03270	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AC2117_03271	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AC2117_03272	COG4651	solute:proton antiporter activity
AC2117_03272	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AC2117_03276	COG0724	RNA recognition motif
AC2117_03277	COG0210	DNA helicase
AC2117_03282	COG1733	regulation of RNA biosynthetic process
AC2117_03283	COG0604	alcohol dehydrogenase
AC2117_03284	COG2900	Belongs to the SlyX family
AC2117_03287	COG1560	Kdo2-lipid A biosynthetic process
AC2117_03289	COG1301	dicarboxylic acid transport
AC2117_03301	COG0473	3-isopropylmalate dehydrogenase activity
AC2117_03306	COG0583	DNA-binding transcription factor activity
AC2117_03314	COG0583	DNA-binding transcription factor activity
AC2117_03316	COG0625	glutathione transferase activity
AC2117_03317	COG2378	regulation of single-species biofilm formation
AC2117_03320	COG1530	ribonuclease E activity
AC2117_03324	COG0583	DNA-binding transcription factor activity
AC2117_03325	COG4221	oxidoreductase activity
AC2117_03326	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AC2117_03328	COG0534	Mate efflux family protein
AC2117_03331	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AC2117_03336	COG0493	'glutamate synthase
AC2117_03336	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AC2117_03338	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AC2117_03339	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AC2117_03342	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AC2117_03344	COG0644	oxidoreductase
AC2117_03344	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
AC2117_03345	COG0425	Belongs to the sulfur carrier protein TusA family
AC2117_03346	COG4535	Mg2 and Co2 transporter CorC
AC2117_03348	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AC2117_03352	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AC2117_03353	COG0475	glutathione-regulated potassium exporter activity
AC2117_03353	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AC2117_03354	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AC2117_03356	COG0484	heat shock protein binding
AC2117_03357	COG0789	Transcriptional regulator
AC2117_03358	COG0598	Magnesium transport protein CorA
AC2117_03359	COG1185	polyribonucleotide nucleotidyltransferase activity
AC2117_03362	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AC2117_03363	COG1074	ATP-dependent DNA helicase activity
AC2117_03364	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AC2117_03368	COG2226	methyltransferase
AC2117_03370	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AC2117_03371	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AC2117_03374	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AC2117_03374	COG2111	Na H antiporter
AC2117_03375	COG1006	Multisubunit Na H antiporter MnhC subunit
AC2117_03376	COG0651	ATP synthesis coupled electron transport
AC2117_03378	COG2212	antiporter activity
AC2117_03380	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AC2117_03382	COG0195	Participates in both transcription termination and antitermination
AC2117_03391	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AC2117_03392	COG0237	dephospho-CoA kinase activity
AC2117_03394	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AC2117_03397	COG0497	DNA recombination
AC2117_03399	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AC2117_03405	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AC2117_03405	COG2169	Transcriptional regulator
AC2117_03406	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AC2117_03420	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AC2117_03423	COG0326	Molecular chaperone. Has ATPase activity
AC2117_03426	COG2056	Na+-H+ antiporter family
AC2117_03427	COG0596	Alpha beta hydrolase
AC2117_03433	COG0222	ribosome binding
AC2117_03434	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AC2117_03440	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AC2117_03446	COG0546	phosphoglycolate phosphatase activity
AC2117_03447	COG1716	ATPase activity
AC2117_03456	COG0181	hydroxymethylbilane synthase activity
AC2117_03458	COG3275	phosphorelay sensor kinase activity
AC2117_03462	COG1538	Outer membrane efflux protein
AC2117_03463	COG0697	spore germination
AC2117_03469	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AC2117_03470	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AC2117_03471	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AC2117_03472	COG0772	Belongs to the SEDS family
AC2117_03477	COG4974	Belongs to the 'phage' integrase family
AC2117_03478	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AC2117_03480	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AC2117_03482	COG2197	response regulator
AC2117_03485	COG0793	Belongs to the peptidase S41A family
AC2117_03486	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AC2117_03487	COG0795	lipopolysaccharide-transporting ATPase activity
AC2117_03495	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AC2117_03495	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AC2117_03497	COG0004	ammonium transporteR
AC2117_03498	COG0347	Belongs to the P(II) protein family
AC2117_03500	COG0606	chelatase, subunit chli
AC2117_03501	COG0431	NADPH-dependent FMN reductase
AC2117_03503	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AC2117_03504	COG0235	Class ii aldolase
AC2117_03505	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AC2117_03508	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AC2117_03511	COG0318	PFAM AMP-dependent synthetase and ligase
AC2117_03513	COG0477	Major facilitator Superfamily
AC2117_03514	COG2860	membrane
AC2117_03515	COG3012	SEC-C Motif Domain Protein
AC2117_03516	COG1253	flavin adenine dinucleotide binding
AC2117_03518	COG2814	Major facilitator Superfamily
AC2117_03520	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AC2117_03527	COG0655	NAD(P)H dehydrogenase (quinone) activity
AC2117_03530	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AC2117_03537	COG1309	transcriptional regulator
AC2117_03545	COG0758	DNA mediated transformation
AC2117_03547	COG0697	spore germination
AC2117_03548	COG1309	transcriptional regulator
AC2117_03551	COG0386	Belongs to the glutathione peroxidase family
AC2117_03555	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AC2117_03565	COG1121	(ABC) transporter
AC2117_03566	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AC2117_03568	COG2837	iron assimilation
AC2117_03569	COG0281	malic enzyme
AC2117_03578	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AC2117_03578	COG0519	Catalyzes the synthesis of GMP from XMP
AC2117_03579	COG4399	Belongs to the UPF0754 family
AC2117_03580	COG2259	Doxx family
AC2117_03581	COG0586	Pfam SNARE associated Golgi protein
AC2117_03584	COG1192	Involved in chromosome partitioning
AC2117_03586	COG0271	Belongs to the BolA IbaG family
AC2117_03590	COG2267	carboxylic ester hydrolase activity
AC2117_03594	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AC2117_03594	COG3321	synthase
AC2117_03594	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_03594	COG0318	PFAM AMP-dependent synthetase and ligase
AC2117_03594	COG0300	oxidoreductase activity
AC2117_03595	COG1960	acyl-CoA dehydrogenase activity
AC2117_03597	COG2197	response regulator
AC2117_03599	COG3916	Acyl-homoserine-lactone synthase
AC2117_03600	COG0477	Major facilitator Superfamily
AC2117_03601	COG1024	Enoyl-CoA hydratase
AC2117_03602	COG1024	Enoyl-CoA hydratase
AC2117_03603	COG1960	acyl-CoA dehydrogenase activity
AC2117_03604	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AC2117_03608	COG1113	amino acid transport
AC2117_03609	COG1113	amino acid transport
AC2117_03610	COG0251	oxidation-reduction process
AC2117_03613	COG1522	sequence-specific DNA binding
AC2117_03618	COG0564	pseudouridine synthase activity
AC2117_03629	COG2801	Transposase and inactivated derivatives
AC2117_03633	COG0494	nUDIX hydrolase
AC2117_03637	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AC2117_03640	COG1802	Transcriptional regulator
AC2117_03641	COG1448	Aminotransferase
AC2117_03642	COG0277	FAD linked oxidase domain protein
AC2117_03644	COG2186	Transcriptional regulator
AC2117_03646	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AC2117_03647	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AC2117_03650	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AC2117_03652	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AC2117_03654	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AC2117_03662	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AC2117_03663	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AC2117_03664	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AC2117_03665	COG1596	polysaccharide export
AC2117_03670	COG0728	peptidoglycan biosynthetic process
AC2117_03671	COG3023	N-Acetylmuramoyl-L-alanine amidase
AC2117_03682	COG0546	phosphoglycolate phosphatase activity
AC2117_03683	COG1028	Short-chain dehydrogenase reductase Sdr
AC2117_03686	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AC2117_03686	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AC2117_03687	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AC2117_03688	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AC2117_03689	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AC2117_03690	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AC2117_03691	COG1116	anion transmembrane transporter activity
AC2117_03692	COG1309	transcriptional regulator
AC2117_03693	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AC2117_03695	COG0196	riboflavin kinase activity
AC2117_03696	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AC2117_03698	COG1047	Peptidyl-prolyl cis-trans
AC2117_03706	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AC2117_03711	COG0583	DNA-binding transcription factor activity
AC2117_03717	COG2951	lytic endotransglycosylase activity
AC2117_03718	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AC2117_03721	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AC2117_03723	COG0671	phosphoesterase, PA-phosphatase related
AC2117_03725	COG0861	Integral membrane protein TerC family
AC2117_03727	COG0402	S-adenosylhomocysteine deaminase activity
AC2117_03730	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AC2117_03731	COG1230	cation diffusion facilitator family transporter
AC2117_03734	COG0706	membrane insertase activity