locus-tag class description AS4_00010 PF00308 Bacterial dnaA protein AS4_00010 PF08299 Bacterial dnaA protein helix-turn-helix AS4_00010 PF11638 DnaA N-terminal domain AS4_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain AS4_00020 PF02767 DNA polymerase III beta subunit, central domain AS4_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain AS4_00030 PF02463 RecF/RecN/SMC N terminal domain AS4_00040 PF01751 Toprim domain AS4_00040 PF00204 DNA gyrase B AS4_00040 PF00986 DNA gyrase B subunit, carboxyl terminus AS4_00040 PF18053 DNA gyrase B subunit insert domain AS4_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_00060 PF00005 ABC transporter AS4_00060 PF12848 ABC transporter AS4_00080 PF00579 tRNA synthetases class I (W and Y) AS4_00090 PF03702 Anhydro-N-acetylmuramic acid kinase AS4_00100 PF00561 alpha/beta hydrolase fold AS4_00110 PF01521 Iron-sulphur cluster biosynthesis AS4_00150 PF07859 alpha/beta hydrolase fold AS4_00170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AS4_00210 PF00171 Aldehyde dehydrogenase family AS4_00220 PF06940 Domain of unknown function (DUF1287) AS4_00230 PF00209 Sodium:neurotransmitter symporter family AS4_00250 PF01189 16S rRNA methyltransferase RsmB/F AS4_00250 PF01029 NusB family AS4_00260 PF02911 Formyl transferase, C-terminal domain AS4_00260 PF00551 Formyl transferase AS4_00270 PF05658 Head domain of trimeric autotransporter adhesin AS4_00270 PF03895 YadA-like membrane anchor domain AS4_00270 PF13018 Extended Signal Peptide of Type V secretion system AS4_00270 PF05662 Coiled stalk of trimeric autotransporter adhesin AS4_00270 PF13018 Extended Signal Peptide of Type V secretion system AS4_00270 PF03895 YadA-like membrane anchor domain AS4_00270 PF05662 Coiled stalk of trimeric autotransporter adhesin AS4_00270 PF05658 Head domain of trimeric autotransporter adhesin AS4_00280 PF01389 OmpA-like transmembrane domain AS4_00280 PF00691 OmpA family AS4_00300 PF00920 Dehydratase family AS4_00340 PF00120 Glutamine synthetase, catalytic domain AS4_00370 PF01177 Asp/Glu/Hydantoin racemase AS4_00380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS4_00390 PF01252 Signal peptidase (SPase) II AS4_00400 PF06827 Zinc finger found in FPG and IleRS AS4_00400 PF00133 tRNA synthetases class I (I, L, M and V) AS4_00400 PF08264 Anticodon-binding domain of tRNA AS4_00410 PF01687 Riboflavin kinase AS4_00410 PF06574 FAD synthetase AS4_00440 PF00860 Permease family AS4_00450 PF00311 Phosphoenolpyruvate carboxylase AS4_00460 PF00440 Bacterial regulatory proteins, tetR family AS4_00470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS4_00480 PF00873 AcrB/AcrD/AcrF family AS4_00500 PF00684 DnaJ central domain AS4_00500 PF01556 DnaJ C terminal domain AS4_00500 PF00226 DnaJ domain AS4_00530 PF01113 Dihydrodipicolinate reductase, N-terminus AS4_00530 PF05173 Dihydrodipicolinate reductase, C-terminus AS4_00550 PF07690 Major Facilitator Superfamily AS4_00560 PF00248 Aldo/keto reductase family AS4_00570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_00570 PF03466 LysR substrate binding domain AS4_00600 PF00107 Zinc-binding dehydrogenase AS4_00600 PF08240 Alcohol dehydrogenase GroES-like domain AS4_00610 PF03352 Methyladenine glycosylase AS4_00640 PF14815 NUDIX domain AS4_00640 PF00730 HhH-GPD superfamily base excision DNA repair protein AS4_00640 PF00633 Helix-hairpin-helix motif AS4_00640 PF10576 Iron-sulfur binding domain of endonuclease III AS4_00670 PF07043 Protein of unknown function (DUF1328) AS4_00680 PF03692 Putative zinc- or iron-chelating domain AS4_00700 PF12002 MgsA AAA+ ATPase C terminal AS4_00700 PF00004 ATPase family associated with various cellular activities (AAA) AS4_00700 PF16193 AAA C-terminal domain AS4_00710 PF03009 Glycerophosphoryl diester phosphodiesterase family AS4_00740 PF00593 TonB dependent receptor AS4_00740 PF07715 TonB-dependent Receptor Plug Domain AS4_00770 PF01259 SAICAR synthetase AS4_00790 PF00701 Dihydrodipicolinate synthetase family AS4_00800 PF00857 Isochorismatase family AS4_00810 PF01758 Sodium Bile acid symporter family AS4_00820 PF04463 Protein of unknown function (DUF523) AS4_00840 PF00881 Nitroreductase family AS4_00850 PF00440 Bacterial regulatory proteins, tetR family AS4_00870 PF01022 Bacterial regulatory protein, arsR family AS4_00890 PF01545 Cation efflux family AS4_00900 PF01380 SIS domain AS4_00910 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_00910 PF12804 MobA-like NTP transferase domain AS4_00910 PF14602 Hexapeptide repeat of succinyl-transferase AS4_00920 PF04608 Phosphatidylglycerophosphatase A AS4_00930 PF02769 AIR synthase related protein, C-terminal domain AS4_00930 PF00586 AIR synthase related protein, N-terminal domain AS4_00940 PF01029 NusB family AS4_00950 PF00885 6,7-dimethyl-8-ribityllumazine synthase AS4_00960 PF00925 GTP cyclohydrolase II AS4_00960 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AS4_01010 PF02580 D-Tyr-tRNA(Tyr) deacylase AS4_01020 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AS4_01020 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AS4_01030 PF00581 Rhodanese-like domain AS4_01040 PF02666 Phosphatidylserine decarboxylase AS4_01070 PF11808 Phosphate regulon sensor protein PhoR AS4_01070 PF00989 PAS fold AS4_01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_01070 PF00512 His Kinase A (phospho-acceptor) domain AS4_01080 PF00072 Response regulator receiver domain AS4_01080 PF00486 Transcriptional regulatory protein, C terminal AS4_01100 PF00106 short chain dehydrogenase AS4_01120 PF01554 MatE AS4_01130 PF00155 Aminotransferase class I and II AS4_01140 PF13613 Helix-turn-helix of DDE superfamily endonuclease AS4_01140 PF13359 DDE superfamily endonuclease AS4_01150 PF13613 Helix-turn-helix of DDE superfamily endonuclease AS4_01150 PF13359 DDE superfamily endonuclease AS4_01230 PF00795 Carbon-nitrogen hydrolase AS4_01270 PF04286 Protein of unknown function (DUF445) AS4_01310 PF04262 Glutamate-cysteine ligase AS4_01320 PF02600 Disulfide bond formation protein DsbB AS4_01350 PF05728 Uncharacterised protein family (UPF0227) AS4_01360 PF01751 Toprim domain AS4_01360 PF00204 DNA gyrase B AS4_01360 PF00986 DNA gyrase B subunit, carboxyl terminus AS4_01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_01380 PF02653 Branched-chain amino acid transport system / permease component AS4_01400 PF00005 ABC transporter AS4_01400 PF12399 Branched-chain amino acid ATP-binding cassette transporter AS4_01410 PF00005 ABC transporter AS4_01500 PF00072 Response regulator receiver domain AS4_01500 PF00990 Diguanylate cyclase, GGDEF domain AS4_01510 PF00990 Diguanylate cyclase, GGDEF domain AS4_01520 PF07859 alpha/beta hydrolase fold AS4_01540 PF03960 ArsC family AS4_01550 PF03372 Endonuclease/Exonuclease/phosphatase family AS4_01560 PF00156 Phosphoribosyl transferase domain AS4_01580 PF04294 VanW like protein AS4_01590 PF01209 ubiE/COQ5 methyltransferase family AS4_01610 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AS4_01610 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AS4_01620 PF04101 Glycosyltransferase family 28 C-terminal domain AS4_01620 PF03033 Glycosyltransferase family 28 N-terminal domain AS4_01630 PF01225 Mur ligase family, catalytic domain AS4_01630 PF02875 Mur ligase family, glutamate ligase domain AS4_01630 PF08245 Mur ligase middle domain AS4_01640 PF01820 D-ala D-ala ligase N-terminus AS4_01640 PF07478 D-ala D-ala ligase C-terminus AS4_01650 PF03799 Cell division protein FtsQ AS4_01650 PF08478 POTRA domain, FtsQ-type AS4_01660 PF02491 SHS2 domain inserted in FTSA AS4_01670 PF00091 Tubulin/FtsZ family, GTPase domain AS4_01670 PF12327 FtsZ family, C-terminal domain AS4_01680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AS4_01710 PF17831 Pyruvate dehydrogenase E1 component middle domain AS4_01710 PF00456 Transketolase, thiamine diphosphate binding domain AS4_01720 PF02817 e3 binding domain AS4_01720 PF00364 Biotin-requiring enzyme AS4_01720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS4_01730 PF01169 Uncharacterized protein family UPF0016 AS4_01740 PF01613 Flavin reductase like domain AS4_01740 PF00258 Flavodoxin AS4_01750 PF03692 Putative zinc- or iron-chelating domain AS4_01770 PF00571 CBS domain AS4_01770 PF00478 IMP dehydrogenase / GMP reductase domain AS4_01780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS4_01780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS4_01780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS4_01780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS4_01790 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AS4_01790 PF01243 Pyridoxamine 5'-phosphate oxidase AS4_01800 PF17768 RecJ OB domain AS4_01800 PF01368 DHH family AS4_01800 PF02272 DHHA1 domain AS4_01860 PF05726 Pirin C-terminal cupin domain AS4_01860 PF02678 Pirin AS4_01900 PF00561 alpha/beta hydrolase fold AS4_01910 PF11798 IMS family HHH motif AS4_01910 PF11799 impB/mucB/samB family C-terminal domain AS4_01910 PF00817 impB/mucB/samB family AS4_01930 PF07690 Major Facilitator Superfamily AS4_01950 PF02581 Thiamine monophosphate synthase AS4_01950 PF03070 TENA/THI-4/PQQC family AS4_01950 PF08543 Phosphomethylpyrimidine kinase AS4_01970 PF07690 Major Facilitator Superfamily AS4_01980 PF00436 Single-strand binding protein family AS4_02020 PF00578 AhpC/TSA family AS4_02020 PF10417 C-terminal domain of 1-Cys peroxiredoxin AS4_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_02030 PF03466 LysR substrate binding domain AS4_02040 PF00857 Isochorismatase family AS4_02050 PF05726 Pirin C-terminal cupin domain AS4_02050 PF02678 Pirin AS4_02060 PF01593 Flavin containing amine oxidoreductase AS4_02100 PF02661 Fic/DOC family AS4_02100 PF12728 Helix-turn-helix domain AS4_02180 PF00266 Aminotransferase class-V AS4_02190 PF02705 K+ potassium transporter AS4_02230 PF00230 Major intrinsic protein AS4_02240 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS4_02240 PF12833 Helix-turn-helix domain AS4_02260 PF04362 Bacterial Fe(2+) trafficking AS4_02270 PF00206 Lyase AS4_02270 PF14698 Argininosuccinate lyase C-terminal AS4_02280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_02280 PF07694 5TMR of 5TMR-LYT AS4_02280 PF06580 Histidine kinase AS4_02290 PF00072 Response regulator receiver domain AS4_02290 PF04397 LytTr DNA-binding domain AS4_02300 PF03900 Porphobilinogen deaminase, C-terminal domain AS4_02300 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AS4_02350 PF00816 H-NS histone family AS4_02380 PF03958 Bacterial type II/III secretion system short domain AS4_02380 PF00263 Bacterial type II and III secretion system protein AS4_02390 PF16697 Inner membrane component of T3SS, cytoplasmic domain AS4_02400 PF13419 Haloacid dehalogenase-like hydrolase AS4_02410 PF04715 Anthranilate synthase component I, N terminal region AS4_02410 PF00425 chorismate binding enzyme AS4_02420 PF00009 Elongation factor Tu GTP binding domain AS4_02420 PF03143 Elongation factor Tu C-terminal domain AS4_02420 PF03144 Elongation factor Tu domain 2 AS4_02430 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AS4_02440 PF00467 KOW motif AS4_02440 PF02357 Transcription termination factor nusG AS4_02450 PF00298 Ribosomal protein L11, RNA binding domain AS4_02450 PF03946 Ribosomal protein L11, N-terminal domain AS4_02460 PF00687 Ribosomal protein L1p/L10e family AS4_02470 PF00466 Ribosomal protein L10 AS4_02480 PF16320 Ribosomal protein L7/L12 dimerisation domain AS4_02480 PF00542 Ribosomal protein L7/L12 C-terminal domain AS4_02490 PF04560 RNA polymerase Rpb2, domain 7 AS4_02490 PF00562 RNA polymerase Rpb2, domain 6 AS4_02490 PF10385 RNA polymerase beta subunit external 1 domain AS4_02490 PF04565 RNA polymerase Rpb2, domain 3 AS4_02490 PF04563 RNA polymerase beta subunit AS4_02490 PF04561 RNA polymerase Rpb2, domain 2 AS4_02500 PF04997 RNA polymerase Rpb1, domain 1 AS4_02500 PF04998 RNA polymerase Rpb1, domain 5 AS4_02500 PF00623 RNA polymerase Rpb1, domain 2 AS4_02500 PF04983 RNA polymerase Rpb1, domain 3 AS4_02500 PF05000 RNA polymerase Rpb1, domain 4 AS4_02540 PF00561 alpha/beta hydrolase fold AS4_02550 PF13726 Na+-H+ antiporter family AS4_02550 PF03553 Na+/H+ antiporter family AS4_02580 PF00183 Hsp90 protein AS4_02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_02610 PF01323 DSBA-like thioredoxin domain AS4_02640 PF00376 MerR family regulatory protein AS4_02640 PF09278 MerR, DNA binding AS4_02670 PF02803 Thiolase, C-terminal domain AS4_02670 PF00108 Thiolase, N-terminal domain AS4_02680 PF00378 Enoyl-CoA hydratase/isomerase AS4_02680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS4_02680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS4_02710 PF11724 YvbH-like oligomerisation region AS4_02710 PF08000 Bacterial PH domain AS4_02740 PF08459 UvrC Helix-hairpin-helix N-terminal AS4_02740 PF02151 UvrB/uvrC motif AS4_02740 PF01541 GIY-YIG catalytic domain AS4_02760 PF01066 CDP-alcohol phosphatidyltransferase AS4_02810 PF02789 Cytosol aminopeptidase family, N-terminal domain AS4_02810 PF00883 Cytosol aminopeptidase family, catalytic domain AS4_02820 PF03739 Lipopolysaccharide export system permease LptF/LptG AS4_02830 PF03739 Lipopolysaccharide export system permease LptF/LptG AS4_02840 PF01676 Metalloenzyme superfamily AS4_02840 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AS4_02850 PF03572 Peptidase family S41 AS4_02850 PF00595 PDZ domain AS4_02860 PF00072 Response regulator receiver domain AS4_02860 PF02954 Bacterial regulatory protein, Fis family AS4_02860 PF00158 Sigma-54 interaction domain AS4_02870 PF00512 His Kinase A (phospho-acceptor) domain AS4_02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_02880 PF00072 Response regulator receiver domain AS4_02880 PF00196 Bacterial regulatory proteins, luxR family AS4_02890 PF00768 D-alanyl-D-alanine carboxypeptidase AS4_02920 PF00291 Pyridoxal-phosphate dependent enzyme AS4_02930 PF01842 ACT domain AS4_02930 PF03447 Homoserine dehydrogenase, NAD binding domain AS4_02930 PF00742 Homoserine dehydrogenase AS4_02940 PF10411 Disulfide bond isomerase protein N-terminus AS4_02940 PF13098 Thioredoxin-like domain AS4_02950 PF00589 Phage integrase family AS4_02950 PF02899 Phage integrase, N-terminal SAM-like domain AS4_02970 PF07670 Nucleoside recognition AS4_02970 PF02421 Ferrous iron transport protein B AS4_02970 PF07664 Ferrous iron transport protein B C terminus AS4_02990 PF00664 ABC transporter transmembrane region AS4_02990 PF00005 ABC transporter AS4_03010 PF02525 Flavodoxin-like fold AS4_03030 PF04632 Fusaric acid resistance protein family AS4_03050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS4_03070 PF03652 Holliday junction resolvase AS4_03080 PF02622 Uncharacterized ACR, COG1678 AS4_03090 PF02463 RecF/RecN/SMC N terminal domain AS4_03100 PF06865 Pyrimidine/purine nucleoside phosphorylase AS4_03110 PF00588 SpoU rRNA Methylase family AS4_03110 PF08032 RNA 2'-O ribose methyltransferase substrate binding AS4_03130 PF01121 Dephospho-CoA kinase AS4_03140 PF01478 Type IV leader peptidase family AS4_03140 PF06750 Bacterial Peptidase A24 N-terminal domain AS4_03150 PF00482 Type II secretion system (T2SS), protein F AS4_03160 PF00437 Type II/IV secretion system protein AS4_03160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AS4_03170 PF00121 Triosephosphate isomerase AS4_03180 PF03840 Preprotein translocase SecG subunit AS4_03190 PF02576 RimP N-terminal domain AS4_03190 PF17384 RimP C-terminal SH3 domain AS4_03200 PF08529 NusA N-terminal domain AS4_03200 PF00575 S1 RNA binding domain AS4_03200 PF13184 NusA-like KH domain AS4_03210 PF00009 Elongation factor Tu GTP binding domain AS4_03210 PF11987 Translation-initiation factor 2 AS4_03210 PF08364 Bacterial translation initiation factor IF-2 associated region AS4_03210 PF04760 Translation initiation factor IF-2, N-terminal region AS4_03220 PF02033 Ribosome-binding factor A AS4_03240 PF04011 LemA family AS4_03250 PF04536 TPM domain AS4_03270 PF00114 Pilin (bacterial filament) AS4_03270 PF07963 Prokaryotic N-terminal methylation motif AS4_03290 PF00114 Pilin (bacterial filament) AS4_03290 PF07963 Prokaryotic N-terminal methylation motif AS4_03300 PF04932 O-Antigen ligase AS4_03300 PF11846 Virulence factor membrane-bound polymerase, C-terminal AS4_03300 PF15864 Protein glycosylation ligase AS4_03310 PF00210 Ferritin-like domain AS4_03320 PF04324 BFD-like [2Fe-2S] binding domain AS4_03330 PF01042 Endoribonuclease L-PSP AS4_03340 PF13291 ACT domain AS4_03340 PF02824 TGS domain AS4_03340 PF04607 Region found in RelA / SpoT proteins AS4_03350 PF01192 RNA polymerase Rpb6 AS4_03360 PF00625 Guanylate kinase AS4_03370 PF02401 LytB protein AS4_03380 PF14245 Type IV pilin PilA AS4_03380 PF07963 Prokaryotic N-terminal methylation motif AS4_03440 PF07963 Prokaryotic N-terminal methylation motif AS4_03440 PF00114 Pilin (bacterial filament) AS4_03450 PF00886 Ribosomal protein S16 AS4_03460 PF05239 PRC-barrel domain AS4_03460 PF01782 RimM N-terminal domain AS4_03470 PF01746 tRNA (Guanine-1)-methyltransferase AS4_03480 PF01245 Ribosomal protein L19 AS4_03490 PF00561 alpha/beta hydrolase fold AS4_03500 PF00561 alpha/beta hydrolase fold AS4_03510 PF03280 Proteobacterial lipase chaperone protein AS4_03520 PF16198 tRNA pseudouridylate synthase B C-terminal domain AS4_03520 PF09157 Pseudouridine synthase II TruB, C-terminal AS4_03520 PF01509 TruB family pseudouridylate synthase (N terminal domain) AS4_03530 PF01925 Sulfite exporter TauE/SafE AS4_03550 PF00892 EamA-like transporter family AS4_03570 PF00149 Calcineurin-like phosphoesterase AS4_03580 PF01752 Collagenase AS4_03580 PF08453 Peptidase family M9 N-terminal AS4_03580 PF18496 Collagenase G catalytic helper subdomain AS4_03590 PF00892 EamA-like transporter family AS4_03600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS4_03600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS4_03610 PF02913 FAD linked oxidases, C-terminal domain AS4_03610 PF01565 FAD binding domain AS4_03640 PF07478 D-ala D-ala ligase C-terminus AS4_03640 PF01820 D-ala D-ala ligase N-terminus AS4_03660 PF02678 Pirin AS4_03660 PF05726 Pirin C-terminal cupin domain AS4_03680 PF07690 Major Facilitator Superfamily AS4_03690 PF12823 Domain of unknown function (DUF3817) AS4_03710 PF12805 FUSC-like inner membrane protein yccS AS4_03730 PF00080 Copper/zinc superoxide dismutase (SODC) AS4_03740 PF01594 AI-2E family transporter AS4_03770 PF01209 ubiE/COQ5 methyltransferase family AS4_03810 PF08241 Methyltransferase domain AS4_03860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS4_03860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS4_03910 PF05746 DALR anticodon binding domain AS4_03910 PF02092 Glycyl-tRNA synthetase beta subunit AS4_03940 PF05746 DALR anticodon binding domain AS4_03940 PF02092 Glycyl-tRNA synthetase beta subunit AS4_03950 PF02091 Glycyl-tRNA synthetase alpha subunit AS4_04000 PF01565 FAD binding domain AS4_04030 PF00571 CBS domain AS4_04040 PF04024 PspC domain AS4_04070 PF05199 GMC oxidoreductase AS4_04070 PF00732 GMC oxidoreductase AS4_04080 PF00501 AMP-binding enzyme AS4_04080 PF13193 AMP-binding enzyme C-terminal domain AS4_04090 PF12111 Polyribonucleotide phosphorylase C terminal AS4_04090 PF10150 Ribonuclease E/G family AS4_04090 PF00575 S1 RNA binding domain AS4_04100 PF00849 RNA pseudouridylate synthase AS4_04100 PF01479 S4 domain AS4_04110 PF13419 Haloacid dehalogenase-like hydrolase AS4_04120 PF13280 WYL domain AS4_04120 PF08279 HTH domain AS4_04150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_04150 PF03466 LysR substrate binding domain AS4_04180 PF12706 Beta-lactamase superfamily domain AS4_04230 PF00199 Catalase AS4_04230 PF06628 Catalase-related immune-responsive AS4_04310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_04310 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_04310 PF18158 Adaptive response protein AidB N-terminal domain AS4_04350 PF00691 OmpA family AS4_04350 PF05736 OprF membrane domain AS4_04380 PF01590 GAF domain AS4_04380 PF05524 PEP-utilising enzyme, N-terminal AS4_04380 PF00391 PEP-utilising enzyme, mobile domain AS4_04380 PF02896 PEP-utilising enzyme, TIM barrel domain AS4_04390 PF00293 NUDIX domain AS4_04420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_04420 PF03466 LysR substrate binding domain AS4_04450 PF00330 Aconitase family (aconitate hydratase) AS4_04460 PF00694 Aconitase C-terminal domain AS4_04480 PF00180 Isocitrate/isopropylmalate dehydrogenase AS4_04500 PF01176 Translation initiation factor 1A / IF-1 AS4_04530 PF01416 tRNA pseudouridine synthase AS4_04540 PF00710 Asparaginase, N-terminal AS4_04540 PF17763 Glutaminase/Asparaginase C-terminal domain AS4_04570 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS4_04570 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS4_04610 PF03279 Bacterial lipid A biosynthesis acyltransferase AS4_04620 PF01661 Macro domain AS4_04670 PF03466 LysR substrate binding domain AS4_04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_04680 PF01566 Natural resistance-associated macrophage protein AS4_04690 PF03746 LamB/YcsF family AS4_04700 PF07286 Protein of unknown function (DUF1445) AS4_04710 PF02626 Carboxyltransferase domain, subdomain A and B AS4_04720 PF02785 Biotin carboxylase C-terminal domain AS4_04720 PF00364 Biotin-requiring enzyme AS4_04720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS4_04720 PF00289 Biotin carboxylase, N-terminal domain AS4_04750 PF01638 HxlR-like helix-turn-helix AS4_04770 PF01396 Topoisomerase DNA binding C4 zinc finger AS4_04770 PF01751 Toprim domain AS4_04770 PF01131 DNA topoisomerase AS4_04770 PF08272 Topoisomerase I zinc-ribbon-like AS4_04820 PF02595 Glycerate kinase family AS4_04840 PF00580 UvrD/REP helicase N-terminal domain AS4_04840 PF13361 UvrD-like helicase C-terminal domain AS4_04880 PF00999 Sodium/hydrogen exchanger family AS4_04880 PF02254 TrkA-N domain AS4_04890 PF00471 Ribosomal protein L33 AS4_04900 PF00830 Ribosomal L28 family AS4_04910 PF00171 Aldehyde dehydrogenase family AS4_04920 PF08360 QacR-like protein, C-terminal region AS4_04920 PF00440 Bacterial regulatory proteins, tetR family AS4_04930 PF01842 ACT domain AS4_04930 PF00551 Formyl transferase AS4_04950 PF01618 MotA/TolQ/ExbB proton channel family AS4_04970 PF01625 Peptide methionine sulfoxide reductase AS4_04980 PF00753 Metallo-beta-lactamase superfamily AS4_04980 PF04273 Putative phosphatase (DUF442) AS4_04990 PF12146 Serine aminopeptidase, S33 AS4_05000 PF00085 Thioredoxin AS4_05010 PF03061 Thioesterase superfamily AS4_05040 PF04461 Protein of unknown function (DUF520) AS4_05050 PF00581 Rhodanese-like domain AS4_05060 PF01266 FAD dependent oxidoreductase AS4_05060 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AS4_05080 PF03795 YCII-related domain AS4_05090 PF04279 Intracellular septation protein A AS4_05100 PF02811 PHP domain AS4_05110 PF02130 Uncharacterized protein family UPF0054 AS4_05120 PF02562 PhoH-like protein AS4_05130 PF04055 Radical SAM superfamily AS4_05130 PF00919 Uncharacterized protein family UPF0004 AS4_05130 PF01938 TRAM domain AS4_05140 PF10145 Phage-related minor tail protein AS4_05140 PF01551 Peptidase family M23 AS4_05140 PF01464 Transglycosylase SLT domain AS4_05160 PF00056 lactate/malate dehydrogenase, NAD binding domain AS4_05160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AS4_05200 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AS4_05210 PF01066 CDP-alcohol phosphatidyltransferase AS4_05230 PF00403 Heavy-metal-associated domain AS4_05230 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_05230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS4_05270 PF00186 Dihydrofolate reductase AS4_05280 PF00303 Thymidylate synthase AS4_05290 PF09234 Domain of unknown function (DUF1963) AS4_05330 PF01790 Prolipoprotein diacylglyceryl transferase AS4_05360 PF00902 Sec-independent protein translocase protein (TatC) AS4_05370 PF02416 mttA/Hcf106 family AS4_05380 PF02416 mttA/Hcf106 family AS4_05400 PF01725 Ham1 family AS4_05440 PF00561 alpha/beta hydrolase fold AS4_05440 PF07021 Methionine biosynthesis protein MetW AS4_05450 PF00561 alpha/beta hydrolase fold AS4_05460 PF00682 HMGL-like AS4_05460 PF08502 LeuA allosteric (dimerisation) domain AS4_05470 PF01070 FMN-dependent dehydrogenase AS4_05480 PF18331 PKHD-type hydroxylase C-terminal domain AS4_05480 PF13640 2OG-Fe(II) oxygenase superfamily AS4_05490 PF07715 TonB-dependent Receptor Plug Domain AS4_05490 PF00593 TonB dependent receptor AS4_05510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS4_05510 PF05697 Bacterial trigger factor protein (TF) AS4_05510 PF05698 Bacterial trigger factor protein (TF) C-terminus AS4_05520 PF00574 Clp protease AS4_05530 PF06689 ClpX C4-type zinc finger AS4_05530 PF10431 C-terminal, D2-small domain, of ClpB protein AS4_05530 PF07724 AAA domain (Cdc48 subfamily) AS4_05570 PF05683 Fumarase C-terminus AS4_05570 PF05681 Fumarate hydratase (Fumerase) AS4_05590 PF00593 TonB dependent receptor AS4_05590 PF07715 TonB-dependent Receptor Plug Domain AS4_05600 PF07085 DRTGG domain AS4_05600 PF01515 Phosphate acetyl/butaryl transferase AS4_05610 PF00871 Acetokinase family AS4_05620 PF00171 Aldehyde dehydrogenase family AS4_05650 PF00933 Glycosyl hydrolase family 3 N terminal domain AS4_05660 PF03572 Peptidase family S41 AS4_05660 PF11818 C-terminal domain of tail specific protease (DUF3340) AS4_05660 PF00595 PDZ domain AS4_05660 PF17804 Tail specific protease N-terminal domain AS4_05670 PF00563 EAL domain AS4_05670 PF00990 Diguanylate cyclase, GGDEF domain AS4_05670 PF03707 Bacterial signalling protein N terminal repeat AS4_05680 PF16658 Class II release factor RF3, C-terminal domain AS4_05680 PF03144 Elongation factor Tu domain 2 AS4_05680 PF00009 Elongation factor Tu GTP binding domain AS4_05710 PF01026 TatD related DNase AS4_05720 PF00694 Aconitase C-terminal domain AS4_05720 PF00330 Aconitase family (aconitate hydratase) AS4_05730 PF00899 ThiF family AS4_05770 PF03466 LysR substrate binding domain AS4_05770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_05780 PF01207 Dihydrouridine synthase (Dus) AS4_05820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_05820 PF03466 LysR substrate binding domain AS4_05850 PF01593 Flavin containing amine oxidoreductase AS4_05850 PF02027 RolB/RolC glucosidase family AS4_05860 PF00356 Bacterial regulatory proteins, lacI family AS4_05870 PF00795 Carbon-nitrogen hydrolase AS4_05890 PF01425 Amidase AS4_05930 PF00924 Mechanosensitive ion channel AS4_05980 PF07690 Major Facilitator Superfamily AS4_06010 PF02016 LD-carboxypeptidase N-terminal domain AS4_06010 PF17676 LD-carboxypeptidase C-terminal domain AS4_06040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AS4_06040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AS4_06050 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AS4_06060 PF02233 NAD(P) transhydrogenase beta subunit AS4_06080 PF02355 Protein export membrane protein AS4_06080 PF07549 SecD/SecF GG Motif AS4_06090 PF07549 SecD/SecF GG Motif AS4_06090 PF02355 Protein export membrane protein AS4_06090 PF13721 SecD export protein N-terminal TM region AS4_06100 PF02699 Preprotein translocase subunit AS4_06110 PF01702 Queuine tRNA-ribosyltransferase AS4_06150 PF04973 Nicotinamide mononucleotide transporter AS4_06190 PF02547 Queuosine biosynthesis protein AS4_06200 PF00589 Phage integrase family AS4_06620 PF13166 AAA domain AS4_06640 PF00512 His Kinase A (phospho-acceptor) domain AS4_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_06640 PF00672 HAMP domain AS4_06650 PF08335 GlnD PII-uridylyltransferase AS4_06650 PF03710 Glutamate-ammonia ligase adenylyltransferase AS4_06660 PF01063 Amino-transferase class IV AS4_06670 PF01370 NAD dependent epimerase/dehydratase family AS4_06680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS4_06680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS4_06680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS4_06700 PF17103 Stealth protein CR4, conserved region 4 AS4_06700 PF17102 Stealth protein CR3, conserved region 3 AS4_06700 PF11380 Stealth protein CR2, conserved region 2 AS4_06700 PF17101 Stealth protein CR1, conserved region 1 AS4_06730 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AS4_06740 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AS4_06750 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AS4_06760 PF01757 Acyltransferase family AS4_06790 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AS4_06820 PF01336 OB-fold nucleic acid binding domain AS4_06820 PF00152 tRNA synthetases class II (D, K and N) AS4_06820 PF02938 GAD domain AS4_06850 PF07715 TonB-dependent Receptor Plug Domain AS4_06850 PF00593 TonB dependent receptor AS4_06920 PF06146 Phosphate-starvation-inducible E AS4_06950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_06950 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_06950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_06950 PF12806 Acetyl-CoA dehydrogenase C-terminal like AS4_06960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_06960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_06960 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_06960 PF12806 Acetyl-CoA dehydrogenase C-terminal like AS4_06980 PF13193 AMP-binding enzyme C-terminal domain AS4_06980 PF00501 AMP-binding enzyme AS4_06990 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS4_06990 PF12833 Helix-turn-helix domain AS4_07000 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal AS4_07000 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal AS4_07010 PF04030 D-arabinono-1,4-lactone oxidase AS4_07010 PF01565 FAD binding domain AS4_07030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS4_07030 PF03129 Anticodon binding domain AS4_07030 PF02824 TGS domain AS4_07030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS4_07040 PF05198 Translation initiation factor IF-3, N-terminal domain AS4_07040 PF00707 Translation initiation factor IF-3, C-terminal domain AS4_07060 PF02798 Glutathione S-transferase, N-terminal domain AS4_07060 PF00043 Glutathione S-transferase, C-terminal domain AS4_07090 PF09335 SNARE associated Golgi protein AS4_07120 PF01632 Ribosomal protein L35 AS4_07130 PF00453 Ribosomal protein L20 AS4_07190 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AS4_07190 PF01409 tRNA synthetases class II core domain (F) AS4_07200 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AS4_07200 PF01588 Putative tRNA binding domain AS4_07200 PF03147 Ferredoxin-fold anticodon binding domain AS4_07200 PF03483 B3/4 domain AS4_07200 PF03484 tRNA synthetase B5 domain AS4_07210 PF00216 Bacterial DNA-binding protein AS4_07230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS4_07230 PF07497 Rho termination factor, RNA-binding domain AS4_07230 PF07498 Rho termination factor, N-terminal domain AS4_07240 PF00085 Thioredoxin AS4_07250 PF02541 Ppx/GppA phosphatase family AS4_07260 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AS4_07270 PF01171 PP-loop family AS4_07270 PF09179 TilS substrate binding domain AS4_07270 PF11734 TilS substrate C-terminal domain AS4_07280 PF03807 NADP oxidoreductase coenzyme F420-dependent AS4_07280 PF14748 Pyrroline-5-carboxylate reductase dimerisation AS4_07290 PF02325 YGGT family AS4_07300 PF01612 3'-5' exonuclease AS4_07300 PF00476 DNA polymerase family A AS4_07300 PF01367 5'-3' exonuclease, C-terminal SAM fold AS4_07300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AS4_07320 PF00108 Thiolase, N-terminal domain AS4_07320 PF02803 Thiolase, C-terminal domain AS4_07340 PF00691 OmpA family AS4_07340 PF13505 Outer membrane protein beta-barrel domain AS4_07350 PF00691 OmpA family AS4_07350 PF05736 OprF membrane domain AS4_07370 PF01139 tRNA-splicing ligase RtcB AS4_07390 PF00324 Amino acid permease AS4_07400 PF05175 Methyltransferase small domain AS4_07400 PF08468 Methyltransferase small domain N-terminal AS4_07410 PF00860 Permease family AS4_07430 PF01741 Large-conductance mechanosensitive channel, MscL AS4_07450 PF09312 SurA N-terminal domain AS4_07450 PF00639 PPIC-type PPIASE domain AS4_07460 PF06827 Zinc finger found in FPG and IleRS AS4_07460 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AS4_07460 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AS4_07470 PF04966 Carbohydrate-selective porin, OprB family AS4_07480 PF00593 TonB dependent receptor AS4_07480 PF07715 TonB-dependent Receptor Plug Domain AS4_07490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS4_07520 PF10411 Disulfide bond isomerase protein N-terminus AS4_07520 PF13098 Thioredoxin-like domain AS4_07590 PF00330 Aconitase family (aconitate hydratase) AS4_07590 PF00694 Aconitase C-terminal domain AS4_07660 PF00990 Diguanylate cyclase, GGDEF domain AS4_07660 PF13426 PAS domain AS4_07660 PF05231 MASE1 AS4_07660 PF08448 PAS fold AS4_07660 PF08447 PAS fold AS4_07660 PF00563 EAL domain AS4_07700 PF04386 Stringent starvation protein B AS4_07710 PF02798 Glutathione S-transferase, N-terminal domain AS4_07710 PF00043 Glutathione S-transferase, C-terminal domain AS4_07730 PF00380 Ribosomal protein S9/S16 AS4_07740 PF00572 Ribosomal protein L13 AS4_07770 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AS4_07780 PF00398 Ribosomal RNA adenine dimethylase AS4_07790 PF00149 Calcineurin-like phosphoesterase AS4_07840 PF16360 GTP-binding GTPase Middle Region AS4_07840 PF01926 50S ribosome-binding GTPase AS4_07840 PF13167 GTP-binding GTPase N-terminal AS4_07860 PF13091 PLD-like domain AS4_07870 PF10518 TAT (twin-arginine translocation) pathway signal sequence AS4_07870 PF00149 Calcineurin-like phosphoesterase AS4_07920 PF04343 Protein of unknown function, DUF488 AS4_07930 PF03831 PhnA domain AS4_07930 PF08274 PhnA Zinc-Ribbon AS4_07940 PF00196 Bacterial regulatory proteins, luxR family AS4_07940 PF00072 Response regulator receiver domain AS4_07950 PF07690 Major Facilitator Superfamily AS4_07950 PF00083 Sugar (and other) transporter AS4_07960 PF00171 Aldehyde dehydrogenase family AS4_07970 PF02472 Biopolymer transport protein ExbD/TolR AS4_07980 PF02472 Biopolymer transport protein ExbD/TolR AS4_07990 PF01618 MotA/TolQ/ExbB proton channel family AS4_08000 PF03544 Gram-negative bacterial TonB protein C-terminal AS4_08010 PF00593 TonB dependent receptor AS4_08010 PF07715 TonB-dependent Receptor Plug Domain AS4_08020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS4_08030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS4_08050 PF00528 Binding-protein-dependent transport system inner membrane component AS4_08060 PF00528 Binding-protein-dependent transport system inner membrane component AS4_08070 PF00005 ABC transporter AS4_08070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS4_08090 PF00849 RNA pseudouridylate synthase AS4_08090 PF01479 S4 domain AS4_08100 PF04079 Segregation and condensation complex subunit ScpB AS4_08110 PF02616 Segregation and condensation protein ScpA AS4_08130 PF04717 Type VI secretion system, phage-baseplate injector AS4_08180 PF01717 Cobalamin-independent synthase, Catalytic domain AS4_08190 PF01613 Flavin reductase like domain AS4_08220 PF13289 SIR2-like domain AS4_08250 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AS4_08250 PF06594 Haemolysin-type calcium binding protein related domain AS4_08270 PF00872 Transposase, Mutator family AS4_08280 PF00872 Transposase, Mutator family AS4_08290 PF00872 Transposase, Mutator family AS4_08420 PF00268 Ribonucleotide reductase, small chain AS4_08440 PF03477 ATP cone domain AS4_08440 PF02867 Ribonucleotide reductase, barrel domain AS4_08440 PF00317 Ribonucleotide reductase, all-alpha domain AS4_08450 PF00486 Transcriptional regulatory protein, C terminal AS4_08450 PF00072 Response regulator receiver domain AS4_08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_08460 PF00512 His Kinase A (phospho-acceptor) domain AS4_08460 PF00672 HAMP domain AS4_08510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AS4_08520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AS4_08530 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AS4_08530 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AS4_08550 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AS4_08550 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AS4_08550 PF10531 SLBB domain AS4_08560 PF00384 Molybdopterin oxidoreductase AS4_08560 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS4_08560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS4_08570 PF00146 NADH dehydrogenase AS4_08580 PF12838 4Fe-4S dicluster domain AS4_08590 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AS4_08600 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AS4_08610 PF00361 Proton-conducting membrane transporter AS4_08610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AS4_08620 PF00361 Proton-conducting membrane transporter AS4_08630 PF00361 Proton-conducting membrane transporter AS4_08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_08670 PF03466 LysR substrate binding domain AS4_08680 PF00970 Oxidoreductase FAD-binding domain AS4_08680 PF00175 Oxidoreductase NAD-binding domain AS4_08690 PF01266 FAD dependent oxidoreductase AS4_08700 PF00490 Delta-aminolevulinic acid dehydratase AS4_08710 PF03061 Thioesterase superfamily AS4_08720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS4_08720 PF00529 HlyD membrane-fusion protein of T1SS AS4_08730 PF07690 Major Facilitator Superfamily AS4_08750 PF13784 Fic/DOC family N-terminal AS4_08750 PF02661 Fic/DOC family AS4_08760 PF02574 Homocysteine S-methyltransferase AS4_08760 PF00809 Pterin binding enzyme AS4_08760 PF02965 Vitamin B12 dependent methionine synthase, activation domain AS4_08760 PF02607 B12 binding domain AS4_08760 PF02310 B12 binding domain AS4_08770 PF03895 YadA-like membrane anchor domain AS4_08770 PF05658 Head domain of trimeric autotransporter adhesin AS4_08770 PF03895 YadA-like membrane anchor domain AS4_08770 PF05658 Head domain of trimeric autotransporter adhesin AS4_08770 PF05662 Coiled stalk of trimeric autotransporter adhesin AS4_08770 PF05662 Coiled stalk of trimeric autotransporter adhesin AS4_08770 PF13018 Extended Signal Peptide of Type V secretion system AS4_08770 PF13018 Extended Signal Peptide of Type V secretion system AS4_08780 PF01384 Phosphate transporter family AS4_08790 PF14052 Capsule assembly protein Wzi AS4_08810 PF01507 Phosphoadenosine phosphosulfate reductase family AS4_08820 PF00009 Elongation factor Tu GTP binding domain AS4_08850 PF02801 Beta-ketoacyl synthase, C-terminal domain AS4_08850 PF00550 Phosphopantetheine attachment site AS4_08850 PF08659 KR domain AS4_08850 PF00109 Beta-ketoacyl synthase, N-terminal domain AS4_08850 PF16197 Ketoacyl-synthetase C-terminal extension AS4_08850 PF08240 Alcohol dehydrogenase GroES-like domain AS4_08850 PF00698 Acyl transferase domain AS4_08850 PF14765 Polyketide synthase dehydratase AS4_08860 PF00107 Zinc-binding dehydrogenase AS4_08860 PF08240 Alcohol dehydrogenase GroES-like domain AS4_08880 PF03600 Citrate transporter AS4_08890 PF01595 Cyclin M transmembrane N-terminal domain AS4_08890 PF03471 Transporter associated domain AS4_08890 PF00571 CBS domain AS4_08900 PF03466 LysR substrate binding domain AS4_08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_08910 PF00463 Isocitrate lyase family AS4_08930 PF03776 Septum formation topological specificity factor MinE AS4_08940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AS4_08950 PF03775 Septum formation inhibitor MinC, C-terminal domain AS4_08970 PF01553 Acyltransferase AS4_08980 PF00691 OmpA family AS4_08980 PF13488 Glycine zipper AS4_08990 PF13361 UvrD-like helicase C-terminal domain AS4_08990 PF00580 UvrD/REP helicase N-terminal domain AS4_09000 PF00692 dUTPase AS4_09010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS4_09010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS4_09010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS4_09010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS4_09020 PF00696 Amino acid kinase family AS4_09040 PF13230 Glutamine amidotransferases class-II AS4_09050 PF01814 Hemerythrin HHE cation binding domain AS4_09070 PF03658 RnfH family Ubiquitin AS4_09080 PF04355 SmpA / OmlA family AS4_09090 PF01475 Ferric uptake regulator family AS4_09100 PF00437 Type II/IV secretion system protein AS4_09110 PF00437 Type II/IV secretion system protein AS4_09120 PF01168 Alanine racemase, N-terminal domain AS4_09130 PF02673 Bacitracin resistance protein BacA AS4_09190 PF12320 Type 5 capsule protein repressor C-terminal domain AS4_09190 PF00149 Calcineurin-like phosphoesterase AS4_09230 PF10946 Protein of unknown function DUF2625 AS4_09250 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AS4_09260 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AS4_09260 PF14572 Phosphoribosyl synthetase-associated domain AS4_09270 PF00881 Nitroreductase family AS4_09300 PF03616 Sodium/glutamate symporter AS4_09310 PF02417 Chromate transporter AS4_09320 PF01734 Patatin-like phospholipase AS4_09330 PF03061 Thioesterase superfamily AS4_09380 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS4_09380 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS4_09390 PF07152 YaeQ protein AS4_09400 PF02308 MgtC family AS4_09420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS4_09430 PF14883 Hypothetical glycosyl hydrolase family 13 AS4_09430 PF01522 Polysaccharide deacetylase AS4_09440 PF00535 Glycosyl transferase family 2 AS4_09510 PF00440 Bacterial regulatory proteins, tetR family AS4_09530 PF00378 Enoyl-CoA hydratase/isomerase AS4_09550 PF01106 NifU-like domain AS4_09550 PF01521 Iron-sulphur cluster biosynthesis AS4_09560 PF07715 TonB-dependent Receptor Plug Domain AS4_09560 PF00593 TonB dependent receptor AS4_09580 PF00561 alpha/beta hydrolase fold AS4_09590 PF00484 Carbonic anhydrase AS4_09620 PF00324 Amino acid permease AS4_09630 PF04303 PrpF protein AS4_09640 PF00990 Diguanylate cyclase, GGDEF domain AS4_09650 PF00348 Polyprenyl synthetase AS4_09660 PF01145 SPFH domain / Band 7 family AS4_09680 PF01734 Patatin-like phospholipase AS4_09700 PF07690 Major Facilitator Superfamily AS4_09710 PF08019 Phosphoethanolamine transferase EptA/EptB AS4_09710 PF00884 Sulfatase AS4_09720 PF00072 Response regulator receiver domain AS4_09720 PF00486 Transcriptional regulatory protein, C terminal AS4_09730 PF08521 Two-component sensor kinase N-terminal AS4_09730 PF00512 His Kinase A (phospho-acceptor) domain AS4_09730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_09760 PF00909 Ammonium Transporter Family AS4_09810 PF00106 short chain dehydrogenase AS4_09820 PF00194 Eukaryotic-type carbonic anhydrase AS4_09850 PF08264 Anticodon-binding domain of tRNA AS4_09850 PF00133 tRNA synthetases class I (I, L, M and V) AS4_09850 PF10458 Valyl tRNA synthetase tRNA binding arm AS4_09900 PF01906 Putative heavy-metal-binding AS4_09910 PF01906 Putative heavy-metal-binding AS4_09920 PF02321 Outer membrane efflux protein AS4_09930 PF00873 AcrB/AcrD/AcrF family AS4_09940 PF00529 HlyD membrane-fusion protein of T1SS AS4_09940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS4_09950 PF01569 PAP2 superfamily AS4_09970 PF00348 Polyprenyl synthetase AS4_09980 PF00829 Ribosomal prokaryotic L21 protein AS4_09990 PF01016 Ribosomal L27 protein AS4_10010 PF03548 Outer membrane lipoprotein carrier protein LolA AS4_10020 PF03055 Retinal pigment epithelial membrane protein AS4_10080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS4_10080 PF02403 Seryl-tRNA synthetase N-terminal domain AS4_10090 PF10414 Sirohaem synthase dimerisation region AS4_10090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS4_10090 PF14824 Sirohaem biosynthesis protein central AS4_10100 PF00588 SpoU rRNA Methylase family AS4_10150 PF03358 NADPH-dependent FMN reductase AS4_10160 PF13520 Amino acid permease AS4_10170 PF00465 Iron-containing alcohol dehydrogenase AS4_10190 PF03099 Biotin/lipoate A/B protein ligase family AS4_10200 PF04359 Protein of unknown function (DUF493) AS4_10210 PF03979 Sigma-70 factor, region 1.1 AS4_10210 PF04545 Sigma-70, region 4 AS4_10210 PF04542 Sigma-70 region 2 AS4_10210 PF00140 Sigma-70 factor, region 1.2 AS4_10210 PF04539 Sigma-70 region 3 AS4_10210 PF04546 Sigma-70, non-essential region AS4_10240 PF01810 LysE type translocator AS4_10250 PF09335 SNARE associated Golgi protein AS4_10280 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AS4_10310 PF02261 Aspartate decarboxylase AS4_10320 PF01195 Peptidyl-tRNA hydrolase AS4_10330 PF01386 Ribosomal L25p family AS4_10340 PF14572 Phosphoribosyl synthetase-associated domain AS4_10340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AS4_10350 PF00288 GHMP kinases N terminal domain AS4_10350 PF08544 GHMP kinases C terminal AS4_10360 PF03550 Outer membrane lipoprotein LolB AS4_10380 PF01488 Shikimate / quinate 5-dehydrogenase AS4_10380 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AS4_10380 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AS4_10400 PF10410 DnaB-helicase binding domain of primase AS4_10400 PF08275 DNA primase catalytic core, N-terminal domain AS4_10400 PF01807 CHC2 zinc finger AS4_10400 PF08278 DNA primase DnaG DnaB-binding AS4_10400 PF13662 Toprim domain AS4_10410 PF13525 Outer membrane lipoprotein AS4_10420 PF00849 RNA pseudouridylate synthase AS4_10420 PF01479 S4 domain AS4_10460 PF03358 NADPH-dependent FMN reductase AS4_10510 PF01668 SmpB protein AS4_10520 PF01467 Cytidylyltransferase-like AS4_10530 PF00037 4Fe-4S binding domain AS4_10550 PF09423 PhoD-like phosphatase AS4_10550 PF16655 PhoD-like phosphatase, N-terminal domain AS4_10570 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AS4_10570 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AS4_10600 PF00083 Sugar (and other) transporter AS4_10610 PF00455 DeoR C terminal sensor domain AS4_10610 PF08220 DeoR-like helix-turn-helix domain AS4_10620 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AS4_10620 PF01266 FAD dependent oxidoreductase AS4_10650 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AS4_10650 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AS4_10660 PF00781 Diacylglycerol kinase catalytic domain AS4_10680 PF00166 Chaperonin 10 Kd subunit AS4_10690 PF00118 TCP-1/cpn60 chaperonin family AS4_10710 PF01219 Prokaryotic diacylglycerol kinase AS4_10720 PF03009 Glycerophosphoryl diester phosphodiesterase family AS4_10730 PF00873 AcrB/AcrD/AcrF family AS4_10740 PF01769 Divalent cation transporter AS4_10740 PF00571 CBS domain AS4_10740 PF03448 MgtE intracellular N domain AS4_10770 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS4_10770 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS4_10780 PF01784 NIF3 (NGG1p interacting factor 3) AS4_10790 PF13180 PDZ domain AS4_10790 PF17820 PDZ domain AS4_10820 PF18073 Rubredoxin metal binding domain AS4_10830 PF00324 Amino acid permease AS4_10850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AS4_10850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AS4_10860 PF01678 Diaminopimelate epimerase AS4_10890 PF00004 ATPase family associated with various cellular activities (AAA) AS4_10890 PF05362 Lon protease (S16) C-terminal proteolytic domain AS4_10890 PF02190 ATP-dependent protease La (LON) substrate-binding domain AS4_10900 PF01812 5-formyltetrahydrofolate cyclo-ligase family AS4_10920 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AS4_10940 PF00324 Amino acid permease AS4_10950 PF00324 Amino acid permease AS4_10960 PF00929 Exonuclease AS4_10970 PF01979 Amidohydrolase family AS4_11010 PF01435 Peptidase family M48 AS4_11020 PF01464 Transglycosylase SLT domain AS4_11030 PF01171 PP-loop family AS4_11050 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS4_11050 PF01464 Transglycosylase SLT domain AS4_11060 PF01272 Transcription elongation factor, GreA/GreB, C-term AS4_11060 PF03449 Transcription elongation factor, N-terminal AS4_11090 PF05114 Protein of unknown function (DUF692) AS4_11110 PF04542 Sigma-70 region 2 AS4_11110 PF08281 Sigma-70, region 4 AS4_11190 PF08521 Two-component sensor kinase N-terminal AS4_11190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_11190 PF00512 His Kinase A (phospho-acceptor) domain AS4_11200 PF00486 Transcriptional regulatory protein, C terminal AS4_11200 PF00072 Response regulator receiver domain AS4_11230 PF07715 TonB-dependent Receptor Plug Domain AS4_11230 PF00593 TonB dependent receptor AS4_11250 PF04542 Sigma-70 region 2 AS4_11250 PF08281 Sigma-70, region 4 AS4_11270 PF00593 TonB dependent receptor AS4_11270 PF07660 Secretin and TonB N terminus short domain AS4_11270 PF07715 TonB-dependent Receptor Plug Domain AS4_11280 PF00083 Sugar (and other) transporter AS4_11280 PF08946 Osmosensory transporter coiled coil AS4_11310 PF07715 TonB-dependent Receptor Plug Domain AS4_11310 PF00593 TonB dependent receptor AS4_11310 PF07660 Secretin and TonB N terminus short domain AS4_11320 PF16925 Tetracyclin repressor-like, C-terminal domain AS4_11320 PF00440 Bacterial regulatory proteins, tetR family AS4_11330 PF09277 Erythronolide synthase, docking AS4_11330 PF16197 Ketoacyl-synthetase C-terminal extension AS4_11330 PF14765 Polyketide synthase dehydratase AS4_11330 PF00550 Phosphopantetheine attachment site AS4_11330 PF08990 Erythronolide synthase docking AS4_11330 PF00109 Beta-ketoacyl synthase, N-terminal domain AS4_11330 PF02801 Beta-ketoacyl synthase, C-terminal domain AS4_11330 PF08240 Alcohol dehydrogenase GroES-like domain AS4_11330 PF08659 KR domain AS4_11330 PF00698 Acyl transferase domain AS4_11420 PF13954 PapC N-terminal domain AS4_11420 PF13953 PapC C-terminal domain AS4_11420 PF00577 Outer membrane usher protein AS4_11460 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AS4_11470 PF16970 Type-1 fimbrial protein, A AS4_11480 PF02753 Pili assembly chaperone PapD, C-terminal domain AS4_11480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AS4_11490 PF00577 Outer membrane usher protein AS4_11490 PF13953 PapC C-terminal domain AS4_11490 PF13954 PapC N-terminal domain AS4_11520 PF03466 LysR substrate binding domain AS4_11520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_11530 PF00202 Aminotransferase class-III AS4_11540 PF00171 Aldehyde dehydrogenase family AS4_11550 PF00324 Amino acid permease AS4_11560 PF12833 Helix-turn-helix domain AS4_11580 PF00419 Fimbrial protein AS4_11590 PF13953 PapC C-terminal domain AS4_11590 PF13954 PapC N-terminal domain AS4_11590 PF00577 Outer membrane usher protein AS4_11600 PF02753 Pili assembly chaperone PapD, C-terminal domain AS4_11600 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AS4_11620 PF00419 Fimbrial protein AS4_11680 PF00005 ABC transporter AS4_11700 PF07690 Major Facilitator Superfamily AS4_11710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS4_11710 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_11710 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS4_11710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS4_11710 PF04324 BFD-like [2Fe-2S] binding domain AS4_11720 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS4_11720 PF18267 Rubredoxin NAD+ reductase C-terminal domain AS4_11720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_11720 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS4_11720 PF04324 BFD-like [2Fe-2S] binding domain AS4_11730 PF00384 Molybdopterin oxidoreductase AS4_11730 PF01568 Molydopterin dinucleotide binding domain AS4_11730 PF04324 BFD-like [2Fe-2S] binding domain AS4_11730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AS4_11740 PF12804 MobA-like NTP transferase domain AS4_11750 PF12804 MobA-like NTP transferase domain AS4_11760 PF04055 Radical SAM superfamily AS4_11760 PF06463 Molybdenum Cofactor Synthesis C AS4_11780 PF02391 MoaE protein AS4_11790 PF09339 IclR helix-turn-helix domain AS4_11790 PF01614 Bacterial transcriptional regulator AS4_11800 PF01144 Coenzyme A transferase AS4_11810 PF01144 Coenzyme A transferase AS4_11820 PF00108 Thiolase, N-terminal domain AS4_11820 PF02803 Thiolase, C-terminal domain AS4_11830 PF10397 Adenylosuccinate lyase C-terminus AS4_11830 PF00206 Lyase AS4_11840 PF00561 alpha/beta hydrolase fold AS4_11850 PF07690 Major Facilitator Superfamily AS4_11860 PF02627 Carboxymuconolactone decarboxylase family AS4_11870 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AS4_11870 PF00775 Dioxygenase AS4_11880 PF00775 Dioxygenase AS4_11890 PF01487 Type I 3-dehydroquinase AS4_11900 PF05048 Periplasmic copper-binding protein (NosD) AS4_11910 PF04966 Carbohydrate-selective porin, OprB family AS4_11920 PF01011 PQQ enzyme repeat AS4_11920 PF13360 PQQ-like domain AS4_11930 PF00376 MerR family regulatory protein AS4_11930 PF09278 MerR, DNA binding AS4_11940 PF00403 Heavy-metal-associated domain AS4_11970 PF00512 His Kinase A (phospho-acceptor) domain AS4_11970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_11970 PF00672 HAMP domain AS4_11980 PF00072 Response regulator receiver domain AS4_11980 PF00486 Transcriptional regulatory protein, C terminal AS4_12000 PF17209 Hfq protein AS4_12010 PF02673 Bacitracin resistance protein BacA AS4_12020 PF03814 Potassium-transporting ATPase A subunit AS4_12040 PF02669 K+-transporting ATPase, c chain AS4_12050 PF02702 Osmosensitive K+ channel His kinase sensor domain AS4_12050 PF13492 GAF domain AS4_12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_12050 PF00512 His Kinase A (phospho-acceptor) domain AS4_12050 PF13493 Domain of unknown function (DUF4118) AS4_12060 PF00072 Response regulator receiver domain AS4_12060 PF00486 Transcriptional regulatory protein, C terminal AS4_12100 PF12146 Serine aminopeptidase, S33 AS4_12110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_12110 PF03466 LysR substrate binding domain AS4_12170 PF13302 Acetyltransferase (GNAT) domain AS4_12200 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS4_12200 PF12833 Helix-turn-helix domain AS4_12240 PF05195 Aminopeptidase P, N-terminal domain AS4_12240 PF00557 Metallopeptidase family M24 AS4_12260 PF01494 FAD binding domain AS4_12270 PF01494 FAD binding domain AS4_12290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AS4_12310 PF02021 Uncharacterised protein family UPF0102 AS4_12320 PF04972 BON domain AS4_12340 PF09297 NADH pyrophosphatase zinc ribbon domain AS4_12340 PF00293 NUDIX domain AS4_12360 PF00929 Exonuclease AS4_12370 PF01476 LysM domain AS4_12370 PF01464 Transglycosylase SLT domain AS4_12380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS4_12390 PF00528 Binding-protein-dependent transport system inner membrane component AS4_12400 PF12911 N-terminal TM domain of oligopeptide transport permease C AS4_12400 PF00528 Binding-protein-dependent transport system inner membrane component AS4_12410 PF00005 ABC transporter AS4_12410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS4_12420 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_12420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS4_12470 PF00557 Metallopeptidase family M24 AS4_12480 PF00318 Ribosomal protein S2 AS4_12490 PF00889 Elongation factor TS AS4_12510 PF12833 Helix-turn-helix domain AS4_12560 PF16142 Domain of unknown function (DUF4850) AS4_12590 PF05036 Sporulation related domain AS4_12590 PF03330 Lytic transglycolase AS4_12600 PF13406 Transglycosylase SLT domain AS4_12610 PF01098 Cell cycle protein AS4_12630 PF14489 QueF-like protein AS4_12630 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AS4_12640 PF01061 ABC-2 type transporter AS4_12650 PF00005 ABC transporter AS4_12660 PF01266 FAD dependent oxidoreductase AS4_12670 PF00149 Calcineurin-like phosphoesterase AS4_12730 PF00313 'Cold-shock' DNA-binding domain AS4_12780 PF01381 Helix-turn-helix AS4_13000 PF00464 Serine hydroxymethyltransferase AS4_13010 PF03449 Transcription elongation factor, N-terminal AS4_13010 PF01272 Transcription elongation factor, GreA/GreB, C-term AS4_13030 PF04345 Chorismate lyase AS4_13040 PF01040 UbiA prenyltransferase family AS4_13080 PF00860 Permease family AS4_13100 PF01613 Flavin reductase like domain AS4_13150 PF02567 Phenazine biosynthesis-like protein AS4_13160 PF05193 Peptidase M16 inactive domain AS4_13160 PF00675 Insulinase (Peptidase family M16) AS4_13180 PF00970 Oxidoreductase FAD-binding domain AS4_13180 PF00175 Oxidoreductase NAD-binding domain AS4_13190 PF18389 TrmO C-terminal domain AS4_13190 PF01980 tRNA-methyltransferase O AS4_13230 PF02581 Thiamine monophosphate synthase AS4_13240 PF00202 Aminotransferase class-III AS4_13250 PF03928 Haem-degrading AS4_13320 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AS4_13320 PF00437 Type II/IV secretion system protein AS4_13330 PF04076 Bacterial OB fold (BOF) protein AS4_13340 PF00486 Transcriptional regulatory protein, C terminal AS4_13340 PF00072 Response regulator receiver domain AS4_13350 PF00512 His Kinase A (phospho-acceptor) domain AS4_13350 PF08521 Two-component sensor kinase N-terminal AS4_13350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_13370 PF00293 NUDIX domain AS4_13390 PF00905 Penicillin binding protein transpeptidase domain AS4_13390 PF14814 Bifunctional transglycosylase second domain AS4_13390 PF00912 Transglycosylase AS4_13400 PF01513 ATP-NAD kinase AS4_13410 PF07023 Protein of unknown function (DUF1315) AS4_13430 PF00591 Glycosyl transferase family, a/b domain AS4_13430 PF02885 Glycosyl transferase family, helical bundle domain AS4_13440 PF00375 Sodium:dicarboxylate symporter family AS4_13460 PF00472 RF-1 domain AS4_13470 PF01018 GTP1/OBG AS4_13470 PF01926 50S ribosome-binding GTPase AS4_13480 PF00696 Amino acid kinase family AS4_13480 PF01472 PUA domain AS4_13510 PF07759 Protein of unknown function (DUF1615) AS4_13520 PF01207 Dihydrouridine synthase (Dus) AS4_13540 PF05163 DinB family AS4_13550 PF03060 Nitronate monooxygenase AS4_13610 PF01596 O-methyltransferase AS4_13650 PF00578 AhpC/TSA family AS4_13650 PF10417 C-terminal domain of 1-Cys peroxiredoxin AS4_13660 PF04408 Helicase associated domain (HA2) AS4_13660 PF00271 Helicase conserved C-terminal domain AS4_13660 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AS4_13660 PF00270 DEAD/DEAH box helicase AS4_13660 PF11898 Domain of unknown function (DUF3418) AS4_13670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AS4_13670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AS4_13720 PF05860 haemagglutination activity domain AS4_13730 PF08479 POTRA domain, ShlB-type AS4_13730 PF17287 POTRA domain AS4_13730 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AS4_13740 PF07702 UTRA domain AS4_13740 PF00392 Bacterial regulatory proteins, gntR family AS4_13750 PF05962 HutD AS4_13760 PF01175 Urocanase Rossmann-like domain AS4_13760 PF17392 Urocanase C-terminal domain AS4_13760 PF17391 Urocanase N-terminal domain AS4_13770 PF00221 Aromatic amino acid lyase AS4_13780 PF00324 Amino acid permease AS4_13790 PF01979 Amidohydrolase family AS4_13800 PF00491 Arginase family AS4_13810 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS4_13810 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS4_13850 PF00990 Diguanylate cyclase, GGDEF domain AS4_13850 PF07694 5TMR of 5TMR-LYT AS4_13860 PF00440 Bacterial regulatory proteins, tetR family AS4_13870 PF00743 Flavin-binding monooxygenase-like AS4_13880 PF00106 short chain dehydrogenase AS4_13890 PF01810 LysE type translocator AS4_13910 PF02687 FtsX-like permease family AS4_13910 PF12704 MacB-like periplasmic core domain AS4_13920 PF00005 ABC transporter AS4_13930 PF03772 Competence protein AS4_13930 PF13567 Domain of unknown function (DUF4131) AS4_13930 PF00753 Metallo-beta-lactamase superfamily AS4_13950 PF01343 Peptidase family S49 AS4_13950 PF06965 Na+/H+ antiporter 1 AS4_13970 PF00551 Formyl transferase AS4_13980 PF00586 AIR synthase related protein, N-terminal domain AS4_13980 PF02769 AIR synthase related protein, C-terminal domain AS4_13990 PF01594 AI-2E family transporter AS4_14000 PF00308 Bacterial dnaA protein AS4_14000 PF11638 DnaA N-terminal domain AS4_14000 PF08299 Bacterial dnaA protein helix-turn-helix AS4_14040 PF05816 Toxic anion resistance protein (TelA) AS4_14080 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_14080 PF13192 Thioredoxin domain AS4_14090 PF02525 Flavodoxin-like fold AS4_14100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_14100 PF03466 LysR substrate binding domain AS4_14110 PF00037 4Fe-4S binding domain AS4_14130 PF03960 ArsC family AS4_14140 PF01022 Bacterial regulatory protein, arsR family AS4_14150 PF01758 Sodium Bile acid symporter family AS4_14160 PF13411 MerR HTH family regulatory protein AS4_14230 PF00849 RNA pseudouridylate synthase AS4_14240 PF12137 RNA polymerase recycling family C-terminal AS4_14240 PF00176 SNF2 family N-terminal domain AS4_14240 PF18339 RapA N-terminal Tudor like domain 1 AS4_14240 PF18337 RapA N-terminal Tudor like domain AS4_14240 PF00271 Helicase conserved C-terminal domain AS4_14250 PF00501 AMP-binding enzyme AS4_14270 PF01113 Dihydrodipicolinate reductase, N-terminus AS4_14270 PF05173 Dihydrodipicolinate reductase, C-terminus AS4_14280 PF00440 Bacterial regulatory proteins, tetR family AS4_14290 PF00970 Oxidoreductase FAD-binding domain AS4_14290 PF00175 Oxidoreductase NAD-binding domain AS4_14290 PF00111 2Fe-2S iron-sulfur cluster binding domain AS4_14300 PF00487 Fatty acid desaturase AS4_14340 PF01925 Sulfite exporter TauE/SafE AS4_14350 PF00593 TonB dependent receptor AS4_14350 PF07660 Secretin and TonB N terminus short domain AS4_14350 PF07715 TonB-dependent Receptor Plug Domain AS4_14370 PF00202 Aminotransferase class-III AS4_14380 PF00282 Pyridoxal-dependent decarboxylase conserved domain AS4_14400 PF00037 4Fe-4S binding domain AS4_14400 PF11953 Domain of unknown function (DUF3470) AS4_14420 PF01624 MutS domain I AS4_14420 PF05192 MutS domain III AS4_14420 PF05190 MutS family domain IV AS4_14420 PF00488 MutS domain V AS4_14420 PF05188 MutS domain II AS4_14430 PF13356 Arm DNA-binding domain AS4_14430 PF00589 Phage integrase family AS4_14430 PF14659 Phage integrase, N-terminal SAM-like domain AS4_14480 PF00171 Aldehyde dehydrogenase family AS4_14490 PF03435 Saccharopine dehydrogenase NADP binding domain AS4_14510 PF00561 alpha/beta hydrolase fold AS4_14520 PF06628 Catalase-related immune-responsive AS4_14520 PF00199 Catalase AS4_14530 PF00490 Delta-aminolevulinic acid dehydratase AS4_14540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_14540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS4_14580 PF13411 MerR HTH family regulatory protein AS4_14600 PF01636 Phosphotransferase enzyme family AS4_14630 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_14630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_14630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_14650 PF00158 Sigma-54 interaction domain AS4_14650 PF02954 Bacterial regulatory protein, Fis family AS4_14650 PF06506 Propionate catabolism activator AS4_14660 PF13193 AMP-binding enzyme C-terminal domain AS4_14660 PF00501 AMP-binding enzyme AS4_14680 PF00474 Sodium:solute symporter family AS4_14690 PF07859 alpha/beta hydrolase fold AS4_14710 PF01047 MarR family AS4_14750 PF16970 Type-1 fimbrial protein, A AS4_14760 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AS4_14760 PF02753 Pili assembly chaperone PapD, C-terminal domain AS4_14770 PF00577 Outer membrane usher protein AS4_14770 PF13953 PapC C-terminal domain AS4_14770 PF13954 PapC N-terminal domain AS4_14780 PF16970 Type-1 fimbrial protein, A AS4_14800 PF00196 Bacterial regulatory proteins, luxR family AS4_14800 PF00072 Response regulator receiver domain AS4_14810 PF01627 Hpt domain AS4_14810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_14810 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS4_14810 PF00072 Response regulator receiver domain AS4_14810 PF00512 His Kinase A (phospho-acceptor) domain AS4_14840 PF13538 UvrD-like helicase C-terminal domain AS4_14850 PF06463 Molybdenum Cofactor Synthesis C AS4_14850 PF04055 Radical SAM superfamily AS4_14860 PF00994 Probable molybdopterin binding domain AS4_14860 PF01967 MoaC family AS4_14870 PF00994 Probable molybdopterin binding domain AS4_14870 PF03454 MoeA C-terminal region (domain IV) AS4_14870 PF03453 MoeA N-terminal region (domain I and II) AS4_14880 PF12804 MobA-like NTP transferase domain AS4_14900 PF02391 MoaE protein AS4_14910 PF00384 Molybdopterin oxidoreductase AS4_14920 PF02634 FdhD/NarQ family AS4_14940 PF00528 Binding-protein-dependent transport system inner membrane component AS4_14950 PF03459 TOBE domain AS4_14950 PF00005 ABC transporter AS4_14960 PF00012 Hsp70 protein AS4_14980 PF17287 POTRA domain AS4_14980 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AS4_14980 PF08479 POTRA domain, ShlB-type AS4_14990 PF02794 RTX toxin acyltransferase family AS4_15000 PF13018 Extended Signal Peptide of Type V secretion system AS4_15000 PF13332 Hemagglutinin repeat AS4_15000 PF04829 Pre-toxin domain with VENN motif AS4_15000 PF05860 haemagglutination activity domain AS4_15010 PF13018 Extended Signal Peptide of Type V secretion system AS4_15010 PF13332 Hemagglutinin repeat AS4_15010 PF04829 Pre-toxin domain with VENN motif AS4_15010 PF05860 haemagglutination activity domain AS4_15140 PF01037 Lrp/AsnC ligand binding domain AS4_15150 PF00266 Aminotransferase class-V AS4_15160 PF00324 Amino acid permease AS4_15170 PF12706 Beta-lactamase superfamily domain AS4_15190 PF12833 Helix-turn-helix domain AS4_15190 PF14525 AraC-binding-like domain AS4_15210 PF01738 Dienelactone hydrolase family AS4_15240 PF01613 Flavin reductase like domain AS4_15260 PF14525 AraC-binding-like domain AS4_15260 PF12833 Helix-turn-helix domain AS4_15270 PF00175 Oxidoreductase NAD-binding domain AS4_15270 PF00970 Oxidoreductase FAD-binding domain AS4_15270 PF00111 2Fe-2S iron-sulfur cluster binding domain AS4_15280 PF00866 Ring hydroxylating beta subunit AS4_15290 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AS4_15290 PF00355 Rieske [2Fe-2S] domain AS4_15320 PF07690 Major Facilitator Superfamily AS4_15330 PF14525 AraC-binding-like domain AS4_15330 PF12833 Helix-turn-helix domain AS4_15340 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AS4_15340 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AS4_15350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS4_15350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS4_15370 PF01425 Amidase AS4_15380 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AS4_15400 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AS4_15400 PF00355 Rieske [2Fe-2S] domain AS4_15430 PF00175 Oxidoreductase NAD-binding domain AS4_15430 PF00111 2Fe-2S iron-sulfur cluster binding domain AS4_15440 PF01613 Flavin reductase like domain AS4_15450 PF12833 Helix-turn-helix domain AS4_15450 PF02311 AraC-like ligand binding domain AS4_15460 PF01179 Copper amine oxidase, enzyme domain AS4_15460 PF07833 Copper amine oxidase N-terminal domain AS4_15460 PF02727 Copper amine oxidase, N2 domain AS4_15460 PF02728 Copper amine oxidase, N3 domain AS4_15480 PF00171 Aldehyde dehydrogenase family AS4_15490 PF01804 Penicillin amidase AS4_15500 PF12146 Serine aminopeptidase, S33 AS4_15510 PF00108 Thiolase, N-terminal domain AS4_15510 PF02803 Thiolase, C-terminal domain AS4_15520 PF01144 Coenzyme A transferase AS4_15530 PF01144 Coenzyme A transferase AS4_15540 PF02426 Muconolactone delta-isomerase AS4_15550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AS4_15550 PF13378 Enolase C-terminal domain-like AS4_15560 PF03466 LysR substrate binding domain AS4_15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_15570 PF01926 50S ribosome-binding GTPase AS4_15580 PF01926 50S ribosome-binding GTPase AS4_15590 PF04444 Catechol dioxygenase N terminus AS4_15590 PF00775 Dioxygenase AS4_15600 PF03573 outer membrane porin, OprD family AS4_15620 PF02322 Cytochrome bd terminal oxidase subunit II AS4_15630 PF01654 Cytochrome bd terminal oxidase subunit I AS4_15640 PF03788 LrgA family AS4_15650 PF04172 LrgB-like family AS4_15660 PF02954 Bacterial regulatory protein, Fis family AS4_15660 PF13426 PAS domain AS4_15660 PF00158 Sigma-54 interaction domain AS4_15680 PF00171 Aldehyde dehydrogenase family AS4_15690 PF00107 Zinc-binding dehydrogenase AS4_15690 PF08240 Alcohol dehydrogenase GroES-like domain AS4_15700 PF02653 Branched-chain amino acid transport system / permease component AS4_15720 PF16655 PhoD-like phosphatase, N-terminal domain AS4_15720 PF09423 PhoD-like phosphatase AS4_15730 PF02416 mttA/Hcf106 family AS4_15740 PF02416 mttA/Hcf106 family AS4_15750 PF00902 Sec-independent protein translocase protein (TatC) AS4_15760 PF03781 Sulfatase-modifying factor enzyme 1 AS4_15770 PF00884 Sulfatase AS4_15820 PF07690 Major Facilitator Superfamily AS4_15830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_15830 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_15830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_15840 PF02515 CoA-transferase family III AS4_15850 PF09339 IclR helix-turn-helix domain AS4_15870 PF03060 Nitronate monooxygenase AS4_15880 PF07690 Major Facilitator Superfamily AS4_15890 PF09339 IclR helix-turn-helix domain AS4_15900 PF00108 Thiolase, N-terminal domain AS4_15900 PF02803 Thiolase, C-terminal domain AS4_15910 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AS4_15910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS4_15910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS4_15930 PF00378 Enoyl-CoA hydratase/isomerase AS4_15940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_15940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_15940 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_15950 PF07690 Major Facilitator Superfamily AS4_15960 PF01144 Coenzyme A transferase AS4_15970 PF01144 Coenzyme A transferase AS4_15990 PF07690 Major Facilitator Superfamily AS4_16010 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_16010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_16010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_16010 PF12806 Acetyl-CoA dehydrogenase C-terminal like AS4_16020 PF00378 Enoyl-CoA hydratase/isomerase AS4_16040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS4_16040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS4_16070 PF03466 LysR substrate binding domain AS4_16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_16080 PF01144 Coenzyme A transferase AS4_16090 PF01144 Coenzyme A transferase AS4_16100 PF00108 Thiolase, N-terminal domain AS4_16100 PF02803 Thiolase, C-terminal domain AS4_16110 PF00593 TonB dependent receptor AS4_16110 PF07715 TonB-dependent Receptor Plug Domain AS4_16120 PF03328 HpcH/HpaI aldolase/citrate lyase family AS4_16130 PF04183 IucA / IucC family AS4_16130 PF06276 Ferric iron reductase FhuF-like transporter AS4_16140 PF07690 Major Facilitator Superfamily AS4_16150 PF04183 IucA / IucC family AS4_16150 PF06276 Ferric iron reductase FhuF-like transporter AS4_16160 PF02423 Ornithine cyclodeaminase/mu-crystallin family AS4_16170 PF00291 Pyridoxal-phosphate dependent enzyme AS4_16180 PF04717 Type VI secretion system, phage-baseplate injector AS4_16190 PF03527 RHS protein AS4_16190 PF05593 RHS Repeat AS4_16210 PF03527 RHS protein AS4_16210 PF05593 RHS Repeat AS4_16320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_16320 PF03466 LysR substrate binding domain AS4_16330 PF00180 Isocitrate/isopropylmalate dehydrogenase AS4_16340 PF02028 BCCT, betaine/carnitine/choline family transporter AS4_16350 PF07859 alpha/beta hydrolase fold AS4_16360 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AS4_16360 PF00355 Rieske [2Fe-2S] domain AS4_16370 PF00171 Aldehyde dehydrogenase family AS4_16380 PF00175 Oxidoreductase NAD-binding domain AS4_16380 PF00111 2Fe-2S iron-sulfur cluster binding domain AS4_16380 PF00970 Oxidoreductase FAD-binding domain AS4_16400 PF00775 Dioxygenase AS4_16400 PF04444 Catechol dioxygenase N terminus AS4_16410 PF00175 Oxidoreductase NAD-binding domain AS4_16410 PF00111 2Fe-2S iron-sulfur cluster binding domain AS4_16410 PF00970 Oxidoreductase FAD-binding domain AS4_16430 PF02332 Methane/Phenol/Toluene Hydroxylase AS4_16430 PF04945 YHS domain AS4_16440 PF02406 MmoB/DmpM family AS4_16450 PF02332 Methane/Phenol/Toluene Hydroxylase AS4_16460 PF06099 Phenol hydroxylase subunit AS4_16480 PF02830 V4R domain AS4_16480 PF00158 Sigma-54 interaction domain AS4_16480 PF02954 Bacterial regulatory protein, Fis family AS4_16480 PF06505 Activator of aromatic catabolism AS4_16490 PF00512 His Kinase A (phospho-acceptor) domain AS4_16490 PF00672 HAMP domain AS4_16490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_16500 PF00486 Transcriptional regulatory protein, C terminal AS4_16500 PF00072 Response regulator receiver domain AS4_16510 PF00529 HlyD membrane-fusion protein of T1SS AS4_16510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS4_16520 PF00873 AcrB/AcrD/AcrF family AS4_16540 PF01126 Heme oxygenase AS4_16550 PF04304 Protein of unknown function (DUF454) AS4_16580 PF04542 Sigma-70 region 2 AS4_16580 PF08281 Sigma-70, region 4 AS4_16690 PF00072 Response regulator receiver domain AS4_16690 PF00990 Diguanylate cyclase, GGDEF domain AS4_16700 PF00072 Response regulator receiver domain AS4_16700 PF00990 Diguanylate cyclase, GGDEF domain AS4_16720 PF12344 Ultra-violet resistance protein B AS4_16720 PF17757 UvrB interaction domain AS4_16720 PF02151 UvrB/uvrC motif AS4_16720 PF00271 Helicase conserved C-terminal domain AS4_16720 PF04851 Type III restriction enzyme, res subunit AS4_16740 PF00892 EamA-like transporter family AS4_16760 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS4_16760 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS4_16800 PF05368 NmrA-like family AS4_16810 PF01638 HxlR-like helix-turn-helix AS4_16830 PF00206 Lyase AS4_16830 PF08328 Adenylosuccinate lyase C-terminal AS4_16840 PF04356 Protein of unknown function (DUF489) AS4_16860 PF00293 NUDIX domain AS4_16880 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_16890 PF07943 Penicillin-binding protein 5, C-terminal domain AS4_16890 PF00768 D-alanyl-D-alanine carboxypeptidase AS4_16920 PF01975 Survival protein SurE AS4_16930 PF01476 LysM domain AS4_16930 PF01551 Peptidase family M23 AS4_16940 PF03466 LysR substrate binding domain AS4_16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_16950 PF00202 Aminotransferase class-III AS4_16960 PF00462 Glutaredoxin AS4_16970 PF05362 Lon protease (S16) C-terminal proteolytic domain AS4_16970 PF13654 AAA domain AS4_16980 PF07690 Major Facilitator Superfamily AS4_16990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS4_17000 PF13593 SBF-like CPA transporter family (DUF4137) AS4_17010 PF01197 Ribosomal protein L31 AS4_17040 PF04055 Radical SAM superfamily AS4_17050 PF09285 Elongation factor P, C-terminal AS4_17050 PF08207 Elongation factor P (EF-P) KOW-like domain AS4_17050 PF01132 Elongation factor P (EF-P) OB domain AS4_17060 PF13722 5TM C-terminal transporter carbon starvation CstA AS4_17060 PF02554 Carbon starvation protein CstA AS4_17070 PF04328 Selenoprotein, putative AS4_17090 PF07726 ATPase family associated with various cellular activities (AAA) AS4_17090 PF17863 AAA lid domain AS4_17110 PF13559 Domain of unknown function (DUF4129) AS4_17110 PF01841 Transglutaminase-like superfamily AS4_17110 PF11992 Domain of unknown function (DUF3488) AS4_17120 PF00589 Phage integrase family AS4_17180 PF01381 Helix-turn-helix AS4_17180 PF08671 Anti-repressor SinI AS4_17590 PF00817 impB/mucB/samB family AS4_17590 PF11799 impB/mucB/samB family C-terminal domain AS4_17590 PF11798 IMS family HHH motif AS4_17590 PF13438 Domain of unknown function (DUF4113) AS4_17660 PF07043 Protein of unknown function (DUF1328) AS4_17820 PF00593 TonB dependent receptor AS4_17820 PF07715 TonB-dependent Receptor Plug Domain AS4_17870 PF07715 TonB-dependent Receptor Plug Domain AS4_17870 PF00593 TonB dependent receptor AS4_17900 PF13533 Biotin-lipoyl like AS4_17910 PF00873 AcrB/AcrD/AcrF family AS4_17920 PF00873 AcrB/AcrD/AcrF family AS4_17930 PF02321 Outer membrane efflux protein AS4_17950 PF00860 Permease family AS4_17960 PF00962 Adenosine/AMP deaminase AS4_17980 PF01292 Prokaryotic cytochrome b561 AS4_18010 PF01351 Ribonuclease HII AS4_18020 PF02599 Global regulator protein family AS4_18030 PF13840 ACT domain AS4_18030 PF01842 ACT domain AS4_18030 PF00696 Amino acid kinase family AS4_18040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AS4_18040 PF01411 tRNA synthetases class II (A) AS4_18040 PF02272 DHHA1 domain AS4_18070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS4_18070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AS4_18110 PF01037 Lrp/AsnC ligand binding domain AS4_18120 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AS4_18130 PF01037 Lrp/AsnC ligand binding domain AS4_18140 PF00857 Isochorismatase family AS4_18160 PF13393 Histidyl-tRNA synthetase AS4_18170 PF00709 Adenylosuccinate synthetase AS4_18180 PF01435 Peptidase family M48 AS4_18210 PF00248 Aldo/keto reductase family AS4_18220 PF00027 Cyclic nucleotide-binding domain AS4_18220 PF13545 Crp-like helix-turn-helix domain AS4_18230 PF02566 OsmC-like protein AS4_18250 PF00266 Aminotransferase class-V AS4_18280 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_18300 PF07724 AAA domain (Cdc48 subfamily) AS4_18300 PF17871 AAA lid domain AS4_18300 PF10431 C-terminal, D2-small domain, of ClpB protein AS4_18300 PF02861 Clp amino terminal domain, pathogenicity island component AS4_18300 PF00004 ATPase family associated with various cellular activities (AAA) AS4_18320 PF02926 THUMP domain AS4_18320 PF10672 S-adenosylmethionine-dependent methyltransferase AS4_18320 PF01170 Putative RNA methylase family UPF0020 AS4_18360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS4_18360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS4_18370 PF01979 Amidohydrolase family AS4_18380 PF00691 OmpA family AS4_18420 PF00155 Aminotransferase class I and II AS4_18420 PF00392 Bacterial regulatory proteins, gntR family AS4_18440 PF02390 Putative methyltransferase AS4_18450 PF03466 LysR substrate binding domain AS4_18450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_18510 PF00375 Sodium:dicarboxylate symporter family AS4_18530 PF01965 DJ-1/PfpI family AS4_18550 PF01425 Amidase AS4_18560 PF00364 Biotin-requiring enzyme AS4_18560 PF00289 Biotin carboxylase, N-terminal domain AS4_18560 PF02785 Biotin carboxylase C-terminal domain AS4_18560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS4_18570 PF00392 Bacterial regulatory proteins, gntR family AS4_18570 PF07729 FCD domain AS4_18640 PF01553 Acyltransferase AS4_18650 PF01709 Transcriptional regulator AS4_18680 PF04229 GrpB protein AS4_18700 PF00899 ThiF family AS4_18710 PF03109 ABC1 family AS4_18720 PF02152 Dihydroneopterin aldolase AS4_18750 PF03232 Ubiquinone biosynthesis protein COQ7 AS4_18760 PF07690 Major Facilitator Superfamily AS4_18770 PF07244 Surface antigen variable number repeat AS4_18770 PF01103 Surface antigen AS4_18770 PF17243 POTRA domain TamA domain 1 AS4_18790 PF13193 AMP-binding enzyme C-terminal domain AS4_18790 PF00501 AMP-binding enzyme AS4_18820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS4_18820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS4_18830 PF01435 Peptidase family M48 AS4_18860 PF09424 Yqey-like protein AS4_18870 PF01165 Ribosomal protein S21 AS4_18880 PF00814 Glycoprotease family AS4_18910 PF17763 Glutaminase/Asparaginase C-terminal domain AS4_18910 PF00710 Asparaginase, N-terminal AS4_18920 PF00155 Aminotransferase class I and II AS4_18930 PF01641 SelR domain AS4_18940 PF00255 Glutathione peroxidase AS4_18950 PF12833 Helix-turn-helix domain AS4_18950 PF02311 AraC-like ligand binding domain AS4_18970 PF00873 AcrB/AcrD/AcrF family AS4_18980 PF13533 Biotin-lipoyl like AS4_18990 PF00593 TonB dependent receptor AS4_18990 PF07715 TonB-dependent Receptor Plug Domain AS4_19000 PF00155 Aminotransferase class I and II AS4_19010 PF08335 GlnD PII-uridylyltransferase AS4_19010 PF01966 HD domain AS4_19010 PF01909 Nucleotidyltransferase domain AS4_19020 PF02222 ATP-grasp domain AS4_19050 PF05437 Branched-chain amino acid transport protein (AzlD) AS4_19060 PF03591 AzlC protein AS4_19110 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AS4_19110 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AS4_19120 PF06071 Protein of unknown function (DUF933) AS4_19120 PF01926 50S ribosome-binding GTPase AS4_19130 PF00528 Binding-protein-dependent transport system inner membrane component AS4_19140 PF09383 NIL domain AS4_19140 PF00005 ABC transporter AS4_19150 PF03180 NLPA lipoprotein AS4_19160 PF03180 NLPA lipoprotein AS4_19170 PF00296 Luciferase-like monooxygenase AS4_19190 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AS4_19190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_19240 PF11791 Aconitate B N-terminal domain AS4_19240 PF06434 Aconitate hydratase 2 N-terminus AS4_19240 PF00330 Aconitase family (aconitate hydratase) AS4_19280 PF06039 Malate:quinone oxidoreductase (Mqo) AS4_19290 PF01037 Lrp/AsnC ligand binding domain AS4_19300 PF00027 Cyclic nucleotide-binding domain AS4_19300 PF00520 Ion transport protein AS4_19320 PF03616 Sodium/glutamate symporter AS4_19340 PF00990 Diguanylate cyclase, GGDEF domain AS4_19340 PF03707 Bacterial signalling protein N terminal repeat AS4_19340 PF00563 EAL domain AS4_19370 PF04284 Protein of unknown function (DUF441) AS4_19380 PF02082 Transcriptional regulator AS4_19400 PF00849 RNA pseudouridylate synthase AS4_19400 PF01479 S4 domain AS4_19440 PF01479 S4 domain AS4_19440 PF00849 RNA pseudouridylate synthase AS4_19450 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AS4_19460 PF08676 MutL C terminal dimerisation domain AS4_19460 PF01119 DNA mismatch repair protein, C-terminal domain AS4_19480 PF17209 Hfq protein AS4_19490 PF00639 PPIC-type PPIASE domain AS4_19490 PF09312 SurA N-terminal domain AS4_19500 PF04453 LPS transport system D AS4_19500 PF03968 OstA-like protein AS4_19510 PF01636 Phosphotransferase enzyme family AS4_19520 PF00483 Nucleotidyl transferase AS4_19530 PF02527 rRNA small subunit methyltransferase G AS4_19540 PF13614 AAA domain AS4_19550 PF02195 ParB-like nuclease domain AS4_19550 PF17762 HTH domain found in ParB protein AS4_19560 PF01618 MotA/TolQ/ExbB proton channel family AS4_19570 PF02472 Biopolymer transport protein ExbD/TolR AS4_19580 PF00664 ABC transporter transmembrane region AS4_19580 PF00005 ABC transporter AS4_19590 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AS4_19600 PF02348 Cytidylyltransferase AS4_19610 PF09115 DNA polymerase III, delta subunit, C terminal AS4_19630 PF01026 TatD related DNase AS4_19660 PF02501 Type II secretion system (T2SS), protein I AS4_19660 PF07963 Prokaryotic N-terminal methylation motif AS4_19670 PF07963 Prokaryotic N-terminal methylation motif AS4_19670 PF11612 Type II secretion system (T2SS), protein J AS4_19680 PF03934 Type II secretion system (T2SS), protein K AS4_19700 PF03167 Uracil DNA glycosylase superfamily AS4_19720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS4_19740 PF02224 Cytidylate kinase AS4_19750 PF00575 S1 RNA binding domain AS4_19760 PF00216 Bacterial DNA-binding protein AS4_19790 PF13953 PapC C-terminal domain AS4_19790 PF13954 PapC N-terminal domain AS4_19790 PF00577 Outer membrane usher protein AS4_19800 PF02753 Pili assembly chaperone PapD, C-terminal domain AS4_19800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AS4_19810 PF16970 Type-1 fimbrial protein, A AS4_19850 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AS4_19860 PF03956 Lysine exporter LysO AS4_19870 PF00743 Flavin-binding monooxygenase-like AS4_19900 PF03969 AFG1-like ATPase AS4_19910 PF02386 Cation transport protein AS4_19920 PF02080 TrkA-C domain AS4_19920 PF02254 TrkA-N domain AS4_19950 PF00585 C-terminal regulatory domain of Threonine dehydratase AS4_19950 PF00291 Pyridoxal-phosphate dependent enzyme AS4_19960 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AS4_20010 PF17158 Membrane-associated sensor, integral membrane domain AS4_20010 PF00990 Diguanylate cyclase, GGDEF domain AS4_20020 PF02774 Semialdehyde dehydrogenase, dimerisation domain AS4_20020 PF01118 Semialdehyde dehydrogenase, NAD binding domain AS4_20040 PF02617 ATP-dependent Clp protease adaptor protein ClpS AS4_20050 PF02861 Clp amino terminal domain, pathogenicity island component AS4_20050 PF10431 C-terminal, D2-small domain, of ClpB protein AS4_20050 PF00004 ATPase family associated with various cellular activities (AAA) AS4_20050 PF17871 AAA lid domain AS4_20050 PF07724 AAA domain (Cdc48 subfamily) AS4_20060 PF07859 alpha/beta hydrolase fold AS4_20060 PF00331 Glycosyl hydrolase family 10 AS4_20070 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AS4_20100 PF05958 tRNA (Uracil-5-)-methyltransferase AS4_20110 PF03466 LysR substrate binding domain AS4_20110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_20120 PF13291 ACT domain AS4_20120 PF04607 Region found in RelA / SpoT proteins AS4_20120 PF02824 TGS domain AS4_20140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_20140 PF03466 LysR substrate binding domain AS4_20150 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_20150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_20150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_20160 PF07690 Major Facilitator Superfamily AS4_20170 PF02515 CoA-transferase family III AS4_20180 PF02503 Polyphosphate kinase middle domain AS4_20180 PF13090 Polyphosphate kinase C-terminal domain 2 AS4_20180 PF17941 Polyphosphate kinase C-terminal domain 1 AS4_20180 PF13089 Polyphosphate kinase N-terminal domain AS4_20200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AS4_20200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AS4_20210 PF00440 Bacterial regulatory proteins, tetR family AS4_20230 PF00285 Citrate synthase, C-terminal domain AS4_20260 PF01645 Conserved region in glutamate synthase AS4_20290 PF08007 Cupin superfamily protein AS4_20320 PF02545 Maf-like protein AS4_20340 PF00162 Phosphoglycerate kinase AS4_20360 PF01116 Fructose-bisphosphate aldolase class-II AS4_20400 PF03691 Uncharacterised protein family (UPF0167) AS4_20460 PF02542 YgbB family AS4_20470 PF01649 Ribosomal protein S20 AS4_20480 PF13460 NAD(P)H-binding AS4_20490 PF03737 Aldolase/RraA AS4_20570 PF00270 DEAD/DEAH box helicase AS4_20570 PF00271 Helicase conserved C-terminal domain AS4_20570 PF03461 TRCF domain AS4_20570 PF02559 CarD-like/TRCF domain AS4_20570 PF17757 UvrB interaction domain AS4_20590 PF00211 Adenylate and Guanylate cyclase catalytic domain AS4_20600 PF00111 2Fe-2S iron-sulfur cluster binding domain AS4_20610 PF00012 Hsp70 protein AS4_20620 PF07743 HSCB C-terminal oligomerisation domain AS4_20620 PF00226 DnaJ domain AS4_20630 PF01521 Iron-sulphur cluster biosynthesis AS4_20640 PF01592 NifU-like N terminal domain AS4_20650 PF00266 Aminotransferase class-V AS4_20660 PF02082 Transcriptional regulator AS4_20690 PF00216 Bacterial DNA-binding protein AS4_20700 PF09312 SurA N-terminal domain AS4_20700 PF00639 PPIC-type PPIASE domain AS4_20710 PF12852 Cupin AS4_20710 PF12833 Helix-turn-helix domain AS4_20720 PF00487 Fatty acid desaturase AS4_20730 PF01638 HxlR-like helix-turn-helix AS4_20780 PF02635 DsrE/DsrF-like family AS4_20790 PF01370 NAD dependent epimerase/dehydratase family AS4_20800 PF00206 Lyase AS4_20800 PF10415 Fumarase C C-terminus AS4_20860 PF00857 Isochorismatase family AS4_20870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_20870 PF03466 LysR substrate binding domain AS4_20940 PF01654 Cytochrome bd terminal oxidase subunit I AS4_20950 PF02322 Cytochrome bd terminal oxidase subunit II AS4_20960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS4_20980 PF00892 EamA-like transporter family AS4_21020 PF00202 Aminotransferase class-III AS4_21030 PF00202 Aminotransferase class-III AS4_21090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_21090 PF03466 LysR substrate binding domain AS4_21100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_21100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_21100 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_21130 PF00106 short chain dehydrogenase AS4_21190 PF12697 Alpha/beta hydrolase family AS4_21200 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS4_21200 PF12833 Helix-turn-helix domain AS4_21210 PF07690 Major Facilitator Superfamily AS4_21230 PF03466 LysR substrate binding domain AS4_21230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_21280 PF00892 EamA-like transporter family AS4_21290 PF00155 Aminotransferase class I and II AS4_21310 PF13091 PLD-like domain AS4_21320 PF00107 Zinc-binding dehydrogenase AS4_21320 PF08240 Alcohol dehydrogenase GroES-like domain AS4_21350 PF00005 ABC transporter AS4_21350 PF12848 ABC transporter AS4_21370 PF00155 Aminotransferase class I and II AS4_21380 PF00561 alpha/beta hydrolase fold AS4_21390 PF03594 Benzoate membrane transport protein AS4_21440 PF12832 MFS_1 like family AS4_21450 PF04172 LrgB-like family AS4_21460 PF03788 LrgA family AS4_21470 PF03466 LysR substrate binding domain AS4_21470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_21480 PF09905 DNA-binding protein VF530 AS4_21500 PF08359 YsiA-like protein, C-terminal region AS4_21500 PF00440 Bacterial regulatory proteins, tetR family AS4_21510 PF12706 Beta-lactamase superfamily domain AS4_21530 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_21540 PF00873 AcrB/AcrD/AcrF family AS4_21550 PF00529 HlyD membrane-fusion protein of T1SS AS4_21550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS4_21580 PF03466 LysR substrate binding domain AS4_21580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_21590 PF07660 Secretin and TonB N terminus short domain AS4_21590 PF00593 TonB dependent receptor AS4_21590 PF07715 TonB-dependent Receptor Plug Domain AS4_21600 PF01053 Cys/Met metabolism PLP-dependent enzyme AS4_21610 PF00378 Enoyl-CoA hydratase/isomerase AS4_21620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_21620 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_21620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_21640 PF00196 Bacterial regulatory proteins, luxR family AS4_21640 PF03472 Autoinducer binding domain AS4_21650 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_21650 PF14759 Reductase C-terminal AS4_21660 PF00501 AMP-binding enzyme AS4_21660 PF13193 AMP-binding enzyme C-terminal domain AS4_21670 PF00107 Zinc-binding dehydrogenase AS4_21670 PF08240 Alcohol dehydrogenase GroES-like domain AS4_21680 PF00171 Aldehyde dehydrogenase family AS4_21690 PF02803 Thiolase, C-terminal domain AS4_21690 PF00108 Thiolase, N-terminal domain AS4_21730 PF00301 Rubredoxin AS4_21740 PF17874 MalT-like TPR region AS4_21740 PF00196 Bacterial regulatory proteins, luxR family AS4_21750 PF13404 AsnC-type helix-turn-helix domain AS4_21750 PF01037 Lrp/AsnC ligand binding domain AS4_21760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_21760 PF03466 LysR substrate binding domain AS4_21770 PF07690 Major Facilitator Superfamily AS4_21780 PF01494 FAD binding domain AS4_21800 PF00884 Sulfatase AS4_21810 PF03781 Sulfatase-modifying factor enzyme 1 AS4_21830 PF00593 TonB dependent receptor AS4_21830 PF07715 TonB-dependent Receptor Plug Domain AS4_21850 PF01047 MarR family AS4_21860 PF00440 Bacterial regulatory proteins, tetR family AS4_21880 PF00561 alpha/beta hydrolase fold AS4_21890 PF07859 alpha/beta hydrolase fold AS4_21910 PF00378 Enoyl-CoA hydratase/isomerase AS4_21920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_21920 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_21920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_21930 PF00501 AMP-binding enzyme AS4_21930 PF13193 AMP-binding enzyme C-terminal domain AS4_21940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS4_21940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS4_21950 PF00171 Aldehyde dehydrogenase family AS4_21960 PF03466 LysR substrate binding domain AS4_21960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_21990 PF04717 Type VI secretion system, phage-baseplate injector AS4_22000 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AS4_22000 PF18381 YcaO cyclodehydratase C-terminal domain AS4_22010 PF02342 TerD domain AS4_22030 PF10138 vWA found in TerF C terminus AS4_22040 PF02342 TerD domain AS4_22060 PF02342 TerD domain AS4_22070 PF02342 TerD domain AS4_22110 PF15608 PELOTA RNA binding domain AS4_22110 PF11202 Phosphoribosyl transferase (PRTase) AS4_22170 PF02342 TerD domain AS4_22180 PF00092 von Willebrand factor type A domain AS4_22190 PF00892 EamA-like transporter family AS4_22200 PF00202 Aminotransferase class-III AS4_22230 PF01042 Endoribonuclease L-PSP AS4_22260 PF07687 Peptidase dimerisation domain AS4_22260 PF01546 Peptidase family M20/M25/M40 AS4_22270 PF00171 Aldehyde dehydrogenase family AS4_22280 PF00355 Rieske [2Fe-2S] domain AS4_22290 PF03466 LysR substrate binding domain AS4_22290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_22300 PF01494 FAD binding domain AS4_22310 PF03561 Allantoicase repeat AS4_22320 PF04115 Ureidoglycolate lyase AS4_22340 PF00576 HIUase/Transthyretin family AS4_22400 PF00449 Urease alpha-subunit, N-terminal domain AS4_22400 PF01979 Amidohydrolase family AS4_22410 PF00699 Urease beta subunit AS4_22420 PF00547 Urease, gamma subunit AS4_22430 PF01774 UreD urease accessory protein AS4_22450 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS4_22460 PF01730 UreF AS4_22470 PF05194 UreE urease accessory protein, C-terminal domain AS4_22470 PF02814 UreE urease accessory protein, N-terminal domain AS4_22480 PF00582 Universal stress protein family AS4_22530 PF01264 Chorismate synthase AS4_22540 PF05175 Methyltransferase small domain AS4_22580 PF03109 ABC1 family AS4_22590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_22590 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_22590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_22600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_22600 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_22600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_22610 PF00583 Acetyltransferase (GNAT) family AS4_22640 PF12833 Helix-turn-helix domain AS4_22640 PF02311 AraC-like ligand binding domain AS4_22650 PF01597 Glycine cleavage H-protein AS4_22720 PF13613 Helix-turn-helix of DDE superfamily endonuclease AS4_22720 PF13359 DDE superfamily endonuclease AS4_22730 PF13613 Helix-turn-helix of DDE superfamily endonuclease AS4_22730 PF13359 DDE superfamily endonuclease AS4_22850 PF00793 DAHP synthetase I family AS4_22860 PF00563 EAL domain AS4_22860 PF00990 Diguanylate cyclase, GGDEF domain AS4_22860 PF03707 Bacterial signalling protein N terminal repeat AS4_22870 PF00753 Metallo-beta-lactamase superfamily AS4_22890 PF04143 Sulphur transport AS4_22930 PF01740 STAS domain AS4_22930 PF00916 Sulfate permease family AS4_22940 PF00375 Sodium:dicarboxylate symporter family AS4_22960 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AS4_22980 PF02654 Cobalamin-5-phosphate synthase AS4_22990 PF00300 Histidine phosphatase superfamily (branch 1) AS4_23000 PF02277 Phosphoribosyltransferase AS4_23010 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AS4_23030 PF13419 Haloacid dehalogenase-like hydrolase AS4_23060 PF00593 TonB dependent receptor AS4_23060 PF07715 TonB-dependent Receptor Plug Domain AS4_23070 PF07690 Major Facilitator Superfamily AS4_23100 PF06276 Ferric iron reductase FhuF-like transporter AS4_23100 PF04183 IucA / IucC family AS4_23110 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AS4_23120 PF04183 IucA / IucC family AS4_23120 PF06276 Ferric iron reductase FhuF-like transporter AS4_23130 PF01593 Flavin containing amine oxidoreductase AS4_23140 PF00230 Major intrinsic protein AS4_23160 PF01636 Phosphotransferase enzyme family AS4_23180 PF01638 HxlR-like helix-turn-helix AS4_23190 PF04073 Aminoacyl-tRNA editing domain AS4_23200 PF01066 CDP-alcohol phosphatidyltransferase AS4_23210 PF12146 Serine aminopeptidase, S33 AS4_23210 PF12147 Putative methyltransferase AS4_23220 PF00782 Dual specificity phosphatase, catalytic domain AS4_23280 PF00291 Pyridoxal-phosphate dependent enzyme AS4_23290 PF01553 Acyltransferase AS4_23300 PF12697 Alpha/beta hydrolase family AS4_23300 PF08241 Methyltransferase domain AS4_23310 PF00440 Bacterial regulatory proteins, tetR family AS4_23310 PF17925 Tetracyclin repressor-like, C-terminal domain AS4_23370 PF00248 Aldo/keto reductase family AS4_23380 PF03466 LysR substrate binding domain AS4_23380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_23390 PF06865 Pyrimidine/purine nucleoside phosphorylase AS4_23400 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS4_23400 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AS4_23410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AS4_23420 PF00149 Calcineurin-like phosphoesterase AS4_23430 PF00881 Nitroreductase family AS4_23450 PF01266 FAD dependent oxidoreductase AS4_23480 PF01266 FAD dependent oxidoreductase AS4_23490 PF01098 Cell cycle protein AS4_23500 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AS4_23510 PF04977 Septum formation initiator AS4_23520 PF00113 Enolase, C-terminal TIM barrel domain AS4_23520 PF03952 Enolase, N-terminal domain AS4_23530 PF00793 DAHP synthetase I family AS4_23540 PF06418 CTP synthase N-terminus AS4_23540 PF00117 Glutamine amidotransferase class-I AS4_23560 PF00206 Lyase AS4_23560 PF10415 Fumarase C C-terminus AS4_23570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_23570 PF03466 LysR substrate binding domain AS4_23600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS4_23600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_23620 PF12697 Alpha/beta hydrolase family AS4_23640 PF07690 Major Facilitator Superfamily AS4_23650 PF03466 LysR substrate binding domain AS4_23650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_23660 PF04444 Catechol dioxygenase N terminus AS4_23660 PF00775 Dioxygenase AS4_23670 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AS4_23670 PF00355 Rieske [2Fe-2S] domain AS4_23680 PF00866 Ring hydroxylating beta subunit AS4_23690 PF00970 Oxidoreductase FAD-binding domain AS4_23690 PF00175 Oxidoreductase NAD-binding domain AS4_23690 PF00111 2Fe-2S iron-sulfur cluster binding domain AS4_23700 PF00106 short chain dehydrogenase AS4_23710 PF03594 Benzoate membrane transport protein AS4_23760 PF00083 Sugar (and other) transporter AS4_23790 PF02146 Sir2 family AS4_23810 PF00206 Lyase AS4_23810 PF10415 Fumarase C C-terminus AS4_23820 PF00474 Sodium:solute symporter family AS4_23830 PF01037 Lrp/AsnC ligand binding domain AS4_23840 PF01619 Proline dehydrogenase AS4_23840 PF14850 DNA-binding domain of Proline dehydrogenase AS4_23840 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AS4_23840 PF00171 Aldehyde dehydrogenase family AS4_23860 PF00893 Small Multidrug Resistance protein AS4_23880 PF00135 Carboxylesterase family AS4_23950 PF02601 Exonuclease VII, large subunit AS4_23950 PF13742 OB-fold nucleic acid binding domain AS4_23970 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AS4_23970 PF01433 Peptidase family M1 domain AS4_23970 PF11940 Domain of unknown function (DUF3458) Ig-like fold AS4_24000 PF11412 Disulphide bond corrector protein DsbC AS4_24000 PF02683 Cytochrome C biogenesis protein transmembrane region AS4_24010 PF08534 Redoxin AS4_24020 PF13098 Thioredoxin-like domain AS4_24030 PF01047 MarR family AS4_24070 PF00717 Peptidase S24-like AS4_24100 PF11798 IMS family HHH motif AS4_24100 PF00817 impB/mucB/samB family AS4_24100 PF11799 impB/mucB/samB family C-terminal domain AS4_24100 PF13438 Domain of unknown function (DUF4113) AS4_24110 PF01220 Dehydroquinase class II AS4_24120 PF00364 Biotin-requiring enzyme AS4_24130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS4_24130 PF00289 Biotin carboxylase, N-terminal domain AS4_24130 PF02785 Biotin carboxylase C-terminal domain AS4_24150 PF07694 5TMR of 5TMR-LYT AS4_24150 PF00990 Diguanylate cyclase, GGDEF domain AS4_24160 PF01425 Amidase AS4_24170 PF00258 Flavodoxin AS4_24170 PF00667 FAD binding domain AS4_24170 PF00175 Oxidoreductase NAD-binding domain AS4_24190 PF02424 ApbE family AS4_24210 PF01925 Sulfite exporter TauE/SafE AS4_24220 PF00793 DAHP synthetase I family AS4_24240 PF00041 Fibronectin type III domain AS4_24240 PF12561 ToxR activated gene A lipoprotein domain AS4_24260 PF00459 Inositol monophosphatase family AS4_24280 PF02646 RmuC family AS4_24290 PF13419 Haloacid dehalogenase-like hydrolase AS4_24300 PF01479 S4 domain AS4_24310 PF00154 recA bacterial DNA recombination protein AS4_24320 PF02631 RecX family AS4_24340 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_24340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AS4_24350 PF07977 FabA-like domain AS4_24360 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AS4_24360 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_24380 PF07244 Surface antigen variable number repeat AS4_24380 PF01103 Surface antigen AS4_24390 PF17820 PDZ domain AS4_24390 PF13180 PDZ domain AS4_24390 PF02163 Peptidase family M50 AS4_24400 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AS4_24400 PF13288 DXP reductoisomerase C-terminal domain AS4_24400 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AS4_24420 PF01255 Putative undecaprenyl diphosphate synthase AS4_24430 PF01765 Ribosome recycling factor AS4_24440 PF00696 Amino acid kinase family AS4_24450 PF04055 Radical SAM superfamily AS4_24450 PF00919 Uncharacterized protein family UPF0004 AS4_24450 PF18693 TRAM domain AS4_24460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_24460 PF00512 His Kinase A (phospho-acceptor) domain AS4_24460 PF00989 PAS fold AS4_24470 PF00072 Response regulator receiver domain AS4_24470 PF02954 Bacterial regulatory protein, Fis family AS4_24470 PF00158 Sigma-54 interaction domain AS4_24490 PF06078 Bacterial protein of unknown function (DUF937) AS4_24520 PF02684 Lipid-A-disaccharide synthetase AS4_24530 PF00593 TonB dependent receptor AS4_24530 PF07715 TonB-dependent Receptor Plug Domain AS4_24580 PF05973 Phage derived protein Gp49-like (DUF891) AS4_24590 PF00664 ABC transporter transmembrane region AS4_24590 PF00005 ABC transporter AS4_24600 PF02253 Phospholipase A1 AS4_24610 PF08367 Peptidase M16C associated AS4_24610 PF05193 Peptidase M16 inactive domain AS4_24610 PF00675 Insulinase (Peptidase family M16) AS4_24640 PF00294 pfkB family carbohydrate kinase AS4_24680 PF01654 Cytochrome bd terminal oxidase subunit I AS4_24690 PF02322 Cytochrome bd terminal oxidase subunit II AS4_24770 PF02110 Hydroxyethylthiazole kinase family AS4_24810 PF00916 Sulfate permease family AS4_24810 PF01740 STAS domain AS4_24830 PF05970 PIF1-like helicase AS4_24830 PF14493 Helix-turn-helix domain AS4_24880 PF03466 LysR substrate binding domain AS4_24880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_24890 PF00923 Transaldolase/Fructose-6-phosphate aldolase AS4_24910 PF01810 LysE type translocator AS4_24920 PF03594 Benzoate membrane transport protein AS4_24930 PF00557 Metallopeptidase family M24 AS4_24940 PF05525 Branched-chain amino acid transport protein AS4_24980 PF03741 Integral membrane protein TerC family AS4_24980 PF03471 Transporter associated domain AS4_25020 PF01274 Malate synthase AS4_25060 PF00448 SRP54-type protein, GTPase domain AS4_25060 PF02881 SRP54-type protein, helical bundle domain AS4_25070 PF05193 Peptidase M16 inactive domain AS4_25070 PF00675 Insulinase (Peptidase family M16) AS4_25130 PF01380 SIS domain AS4_25130 PF00571 CBS domain AS4_25140 PF00291 Pyridoxal-phosphate dependent enzyme AS4_25160 PF00004 ATPase family associated with various cellular activities (AAA) AS4_25160 PF01434 Peptidase family M41 AS4_25160 PF17862 AAA+ lid domain AS4_25180 PF05166 YcgL domain AS4_25190 PF00570 HRDC domain AS4_25190 PF01612 3'-5' exonuclease AS4_25200 PF02132 RecR protein AS4_25200 PF13662 Toprim domain AS4_25210 PF02575 YbaB/EbfC DNA-binding family AS4_25220 PF01053 Cys/Met metabolism PLP-dependent enzyme AS4_25240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS4_25240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS4_25260 PF01230 HIT domain AS4_25330 PF01565 FAD binding domain AS4_25330 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AS4_25340 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS4_25350 PF00465 Iron-containing alcohol dehydrogenase AS4_25370 PF03061 Thioesterase superfamily AS4_25380 PF02308 MgtC family AS4_25390 PF00689 Cation transporting ATPase, C-terminus AS4_25390 PF00690 Cation transporter/ATPase, N-terminus AS4_25410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AS4_25410 PF12170 DNA polymerase III tau subunit V interacting with alpha AS4_25410 PF12169 DNA polymerase III subunits gamma and tau domain III AS4_25420 PF07690 Major Facilitator Superfamily AS4_25470 PF02803 Thiolase, C-terminal domain AS4_25470 PF00108 Thiolase, N-terminal domain AS4_25490 PF00465 Iron-containing alcohol dehydrogenase AS4_25510 PF00106 short chain dehydrogenase AS4_25530 PF02954 Bacterial regulatory protein, Fis family AS4_25550 PF00171 Aldehyde dehydrogenase family AS4_25580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_25580 PF03466 LysR substrate binding domain AS4_25610 PF01323 DSBA-like thioredoxin domain AS4_25620 PF00106 short chain dehydrogenase AS4_25630 PF00440 Bacterial regulatory proteins, tetR family AS4_25640 PF00117 Glutamine amidotransferase class-I AS4_25640 PF02540 NAD synthase AS4_25640 PF00958 GMP synthase C terminal domain AS4_25650 PF03891 Domain of unknown function (DUF333) AS4_25700 PF07690 Major Facilitator Superfamily AS4_25710 PF06445 GyrI-like small molecule binding domain AS4_25710 PF13411 MerR HTH family regulatory protein AS4_25720 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS4_25720 PF12833 Helix-turn-helix domain AS4_25760 PF04264 YceI-like domain AS4_25790 PF00456 Transketolase, thiamine diphosphate binding domain AS4_25790 PF02780 Transketolase, C-terminal domain AS4_25790 PF02779 Transketolase, pyrimidine binding domain AS4_25800 PF02773 S-adenosylmethionine synthetase, C-terminal domain AS4_25800 PF00438 S-adenosylmethionine synthetase, N-terminal domain AS4_25800 PF02772 S-adenosylmethionine synthetase, central domain AS4_25830 PF01810 LysE type translocator AS4_25850 PF02075 Crossover junction endodeoxyribonuclease RuvC AS4_25880 PF00708 Acylphosphatase AS4_25890 PF03853 YjeF-related protein N-terminus AS4_25890 PF01256 Carbohydrate kinase AS4_25900 PF08331 Domain of unknown function (DUF1730) AS4_25910 PF04055 Radical SAM superfamily AS4_25910 PF06968 Biotin and Thiamin Synthesis associated domain AS4_25930 PF00156 Phosphoribosyl transferase domain AS4_25940 PF02674 Colicin V production protein AS4_25950 PF01180 Dihydroorotate dehydrogenase AS4_25990 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AS4_25990 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AS4_26000 PF00881 Nitroreductase family AS4_26020 PF00271 Helicase conserved C-terminal domain AS4_26020 PF00270 DEAD/DEAH box helicase AS4_26030 PF00313 'Cold-shock' DNA-binding domain AS4_26050 PF00140 Sigma-70 factor, region 1.2 AS4_26050 PF04545 Sigma-70, region 4 AS4_26050 PF04542 Sigma-70 region 2 AS4_26060 PF04241 Protein of unknown function (DUF423) AS4_26080 PF05690 Thiazole biosynthesis protein ThiG AS4_26120 PF03992 Antibiotic biosynthesis monooxygenase AS4_26130 PF02525 Flavodoxin-like fold AS4_26150 PF00043 Glutathione S-transferase, C-terminal domain AS4_26150 PF02798 Glutathione S-transferase, N-terminal domain AS4_26160 PF00916 Sulfate permease family AS4_26160 PF01740 STAS domain AS4_26170 PF00072 Response regulator receiver domain AS4_26170 PF00196 Bacterial regulatory proteins, luxR family AS4_26180 PF07730 Histidine kinase AS4_26180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_26200 PF00501 AMP-binding enzyme AS4_26200 PF13193 AMP-binding enzyme C-terminal domain AS4_26210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_26210 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_26210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_26220 PF00106 short chain dehydrogenase AS4_26250 PF09084 NMT1/THI5 like AS4_26260 PF00528 Binding-protein-dependent transport system inner membrane component AS4_26270 PF01062 Bestrophin, RFP-TM, chloride channel AS4_26280 PF17827 PrmC N-terminal domain AS4_26280 PF13847 Methyltransferase domain AS4_26290 PF00472 RF-1 domain AS4_26290 PF03462 PCRF domain AS4_26320 PF00296 Luciferase-like monooxygenase AS4_26330 PF05360 yiaA/B two helix domain AS4_26370 PF03618 Kinase/pyrophosphorylase AS4_26380 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AS4_26380 PF02896 PEP-utilising enzyme, TIM barrel domain AS4_26380 PF00391 PEP-utilising enzyme, mobile domain AS4_26410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AS4_26410 PF06481 COX Aromatic Rich Motif AS4_26420 PF00115 Cytochrome C and Quinol oxidase polypeptide I AS4_26430 PF00510 Cytochrome c oxidase subunit III AS4_26440 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AS4_26450 PF01040 UbiA prenyltransferase family AS4_26490 PF01250 Ribosomal protein S6 AS4_26500 PF01084 Ribosomal protein S18 AS4_26510 PF03948 Ribosomal protein L9, C-terminal domain AS4_26510 PF01281 Ribosomal protein L9, N-terminal domain AS4_26520 PF03796 DnaB-like helicase C terminal domain AS4_26520 PF00772 DnaB-like helicase N terminal domain AS4_26540 PF01168 Alanine racemase, N-terminal domain AS4_26540 PF00842 Alanine racemase, C-terminal domain AS4_26570 PF01841 Transglutaminase-like superfamily AS4_26570 PF08379 Bacterial transglutaminase-like N-terminal region AS4_26590 PF14403 Circularly permuted ATP-grasp type 2 AS4_26610 PF03747 ADP-ribosylglycohydrolase AS4_26620 PF13932 GidA associated domain AS4_26620 PF01134 Glucose inhibited division protein A AS4_26670 PF02954 Bacterial regulatory protein, Fis family AS4_26680 PF02142 MGS-like domain AS4_26680 PF01808 AICARFT/IMPCHase bienzyme AS4_26690 PF02844 Phosphoribosylglycinamide synthetase, N domain AS4_26690 PF02843 Phosphoribosylglycinamide synthetase, C domain AS4_26690 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AS4_26710 PF03180 NLPA lipoprotein AS4_26720 PF09383 NIL domain AS4_26720 PF00005 ABC transporter AS4_26730 PF00528 Binding-protein-dependent transport system inner membrane component AS4_26750 PF00753 Metallo-beta-lactamase superfamily AS4_26750 PF16123 Hydroxyacylglutathione hydrolase C-terminus AS4_26760 PF12146 Serine aminopeptidase, S33 AS4_26810 PF14579 Helix-hairpin-helix motif AS4_26810 PF07733 Bacterial DNA polymerase III alpha NTPase domain AS4_26810 PF01336 OB-fold nucleic acid binding domain AS4_26810 PF02811 PHP domain AS4_26810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AS4_26820 PF00588 SpoU rRNA Methylase family AS4_26830 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_26920 PF03883 Peroxide stress protein YaaA AS4_26940 PF06956 Regulator of RNA terminal phosphate cyclase AS4_26940 PF00158 Sigma-54 interaction domain AS4_26950 PF00753 Metallo-beta-lactamase superfamily AS4_27000 PF01139 tRNA-splicing ligase RtcB AS4_27040 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AS4_27040 PF01137 RNA 3'-terminal phosphate cyclase AS4_27080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS4_27090 PF01842 ACT domain AS4_27090 PF00800 Prephenate dehydratase AS4_27090 PF01817 Chorismate mutase type II AS4_27100 PF01965 DJ-1/PfpI family AS4_27120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_27120 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_27120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_27130 PF01343 Peptidase family S49 AS4_27130 PF08496 Peptidase family S49 N-terminal AS4_27140 PF00375 Sodium:dicarboxylate symporter family AS4_27150 PF00005 ABC transporter AS4_27160 PF00528 Binding-protein-dependent transport system inner membrane component AS4_27170 PF00528 Binding-protein-dependent transport system inner membrane component AS4_27200 PF00355 Rieske [2Fe-2S] domain AS4_27210 PF01596 O-methyltransferase AS4_27240 PF01205 Uncharacterized protein family UPF0029 AS4_27250 PF17803 Bacterial cadherin-like domain AS4_27270 PF00005 ABC transporter AS4_27270 PF12399 Branched-chain amino acid ATP-binding cassette transporter AS4_27280 PF03968 OstA-like protein AS4_27310 PF01380 SIS domain AS4_27310 PF00571 CBS domain AS4_27320 PF01406 tRNA synthetases class I (C) catalytic domain AS4_27320 PF09190 DALR domain AS4_27350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_27350 PF03466 LysR substrate binding domain AS4_27370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_27370 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_27370 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AS4_27380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_27380 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AS4_27390 PF00296 Luciferase-like monooxygenase AS4_27420 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AS4_27440 PF00266 Aminotransferase class-V AS4_27490 PF13533 Biotin-lipoyl like AS4_27520 PF00375 Sodium:dicarboxylate symporter family AS4_27540 PF00535 Glycosyl transferase family 2 AS4_27560 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AS4_27600 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AS4_27600 PF02769 AIR synthase related protein, C-terminal domain AS4_27600 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AS4_27630 PF01966 HD domain AS4_27650 PF07499 RuvA, C-terminal domain AS4_27650 PF01330 RuvA N terminal domain AS4_27660 PF05491 RuvB C-terminal winged helix domain AS4_27660 PF17864 RuvB AAA lid domain AS4_27660 PF05496 Holliday junction DNA helicase RuvB P-loop domain AS4_27670 PF07715 TonB-dependent Receptor Plug Domain AS4_27670 PF00593 TonB dependent receptor AS4_27680 PF02667 Short chain fatty acid transporter AS4_27730 PF03358 NADPH-dependent FMN reductase AS4_27740 PF01758 Sodium Bile acid symporter family AS4_27760 PF01022 Bacterial regulatory protein, arsR family AS4_27770 PF03960 ArsC family AS4_27880 PF04865 Baseplate J-like protein AS4_27970 PF17482 Phage tail sheath C-terminal domain AS4_27970 PF04984 Phage tail sheath protein subtilisin-like domain AS4_28220 PF00717 Peptidase S24-like AS4_28300 PF03061 Thioesterase superfamily AS4_28310 PF01618 MotA/TolQ/ExbB proton channel family AS4_28320 PF02472 Biopolymer transport protein ExbD/TolR AS4_28360 PF07676 WD40-like Beta Propeller Repeat AS4_28360 PF04052 TolB amino-terminal domain AS4_28370 PF00691 OmpA family AS4_28400 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AS4_28410 PF08032 RNA 2'-O ribose methyltransferase substrate binding AS4_28410 PF00588 SpoU rRNA Methylase family AS4_28510 PF13356 Arm DNA-binding domain AS4_28510 PF00589 Phage integrase family AS4_28540 PF11798 IMS family HHH motif AS4_28540 PF00817 impB/mucB/samB family AS4_28540 PF13438 Domain of unknown function (DUF4113) AS4_28540 PF11799 impB/mucB/samB family C-terminal domain AS4_28560 PF00959 Phage lysozyme AS4_28870 PF01507 Phosphoadenosine phosphosulfate reductase family AS4_29040 PF00117 Glutamine amidotransferase class-I AS4_29050 PF00591 Glycosyl transferase family, a/b domain AS4_29050 PF02885 Glycosyl transferase family, helical bundle domain AS4_29060 PF00218 Indole-3-glycerol phosphate synthase AS4_29120 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AS4_29130 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AS4_29140 PF13520 Amino acid permease AS4_29180 PF05675 Protein of unknown function (DUF817) AS4_29190 PF01208 Uroporphyrinogen decarboxylase (URO-D) AS4_29210 PF17954 Quercetinase C-terminal cupin domain AS4_29210 PF02678 Pirin AS4_29220 PF00596 Class II Aldolase and Adducin N-terminal domain AS4_29240 PF00860 Permease family AS4_29250 PF01613 Flavin reductase like domain AS4_29260 PF01042 Endoribonuclease L-PSP AS4_29270 PF00857 Isochorismatase family AS4_29280 PF00296 Luciferase-like monooxygenase AS4_29290 PF00881 Nitroreductase family AS4_29300 PF12697 Alpha/beta hydrolase family AS4_29310 PF00717 Peptidase S24-like AS4_29350 PF00005 ABC transporter AS4_29380 PF00893 Small Multidrug Resistance protein AS4_29390 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS4_29400 PF01425 Amidase AS4_29410 PF01402 Ribbon-helix-helix protein, copG family AS4_29410 PF08753 NikR C terminal nickel binding domain AS4_29430 PF00289 Biotin carboxylase, N-terminal domain AS4_29430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS4_29430 PF02785 Biotin carboxylase C-terminal domain AS4_29460 PF03466 LysR substrate binding domain AS4_29460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_29470 PF02677 Epoxyqueuosine reductase QueH AS4_29480 PF02219 Methylenetetrahydrofolate reductase AS4_29490 PF07927 HicA toxin of bacterial toxin-antitoxin, AS4_29500 PF01381 Helix-turn-helix AS4_29500 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AS4_29510 PF00593 TonB dependent receptor AS4_29510 PF07715 TonB-dependent Receptor Plug Domain AS4_29570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_29570 PF03466 LysR substrate binding domain AS4_29590 PF01557 Fumarylacetoacetate (FAA) hydrolase family AS4_29600 PF01042 Endoribonuclease L-PSP AS4_29610 PF00171 Aldehyde dehydrogenase family AS4_29630 PF03737 Aldolase/RraA AS4_29650 PF01613 Flavin reductase like domain AS4_29660 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AS4_29660 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AS4_29680 PF00593 TonB dependent receptor AS4_29680 PF07715 TonB-dependent Receptor Plug Domain AS4_29790 PF01126 Heme oxygenase AS4_29820 PF07690 Major Facilitator Superfamily AS4_29830 PF00440 Bacterial regulatory proteins, tetR family AS4_29830 PF08361 MAATS-type transcriptional repressor, C-terminal region AS4_29840 PF14863 Alkyl sulfatase dimerisation AS4_29840 PF14864 Alkyl sulfatase C-terminal AS4_29840 PF00753 Metallo-beta-lactamase superfamily AS4_29890 PF02627 Carboxymuconolactone decarboxylase family AS4_29900 PF00171 Aldehyde dehydrogenase family AS4_29910 PF01557 Fumarylacetoacetate (FAA) hydrolase family AS4_29920 PF01494 FAD binding domain AS4_29930 PF12146 Serine aminopeptidase, S33 AS4_29970 PF00106 short chain dehydrogenase AS4_29980 PF00171 Aldehyde dehydrogenase family AS4_29990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS4_29990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS4_30050 PF00202 Aminotransferase class-III AS4_30080 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AS4_30090 PF00324 Amino acid permease AS4_30100 PF09339 IclR helix-turn-helix domain AS4_30100 PF01614 Bacterial transcriptional regulator AS4_30120 PF00465 Iron-containing alcohol dehydrogenase AS4_30130 PF00171 Aldehyde dehydrogenase family AS4_30150 PF02796 Helix-turn-helix domain of resolvase AS4_30150 PF00239 Resolvase, N terminal domain AS4_30170 PF13954 PapC N-terminal domain AS4_30170 PF00577 Outer membrane usher protein AS4_30170 PF13953 PapC C-terminal domain AS4_30220 PF04966 Carbohydrate-selective porin, OprB family AS4_30230 PF00682 HMGL-like AS4_30260 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AS4_30270 PF00392 Bacterial regulatory proteins, gntR family AS4_30270 PF00155 Aminotransferase class I and II AS4_30340 PF03601 Conserved hypothetical protein 698 AS4_30370 PF07690 Major Facilitator Superfamily AS4_30380 PF05853 beta-keto acid cleavage enzyme AS4_30390 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AS4_30400 PF00107 Zinc-binding dehydrogenase AS4_30400 PF08240 Alcohol dehydrogenase GroES-like domain AS4_30420 PF11008 Protein of unknown function (DUF2846) AS4_30440 PF00360 Phytochrome region AS4_30440 PF00990 Diguanylate cyclase, GGDEF domain AS4_30440 PF01590 GAF domain AS4_30440 PF00563 EAL domain AS4_30450 PF01740 STAS domain AS4_30450 PF00916 Sulfate permease family AS4_30460 PF00561 alpha/beta hydrolase fold AS4_30470 PF13419 Haloacid dehalogenase-like hydrolase AS4_30480 PF00266 Aminotransferase class-V AS4_30490 PF01266 FAD dependent oxidoreductase AS4_30500 PF00528 Binding-protein-dependent transport system inner membrane component AS4_30510 PF12857 TOBE-like domain AS4_30510 PF17850 CysA C-terminal regulatory domain AS4_30510 PF00005 ABC transporter AS4_30530 PF00392 Bacterial regulatory proteins, gntR family AS4_30530 PF07702 UTRA domain AS4_30580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS4_30580 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_30600 PF09330 D-lactate dehydrogenase, membrane binding AS4_30600 PF01565 FAD binding domain AS4_30610 PF01070 FMN-dependent dehydrogenase AS4_30620 PF07729 FCD domain AS4_30620 PF00392 Bacterial regulatory proteins, gntR family AS4_30630 PF02652 L-lactate permease AS4_30640 PF00892 EamA-like transporter family AS4_30650 PF03466 LysR substrate binding domain AS4_30650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_30670 PF00764 Arginosuccinate synthase AS4_30710 PF00180 Isocitrate/isopropylmalate dehydrogenase AS4_30720 PF00083 Sugar (and other) transporter AS4_30730 PF00849 RNA pseudouridylate synthase AS4_30740 PF03971 Monomeric isocitrate dehydrogenase AS4_30750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_30750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_30750 PF09317 Domain of unknown function (DUF1974) AS4_30750 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_30840 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AS4_30840 PF05221 S-adenosyl-L-homocysteine hydrolase AS4_30850 PF02219 Methylenetetrahydrofolate reductase AS4_30860 PF04452 RNA methyltransferase AS4_30870 PF00990 Diguanylate cyclase, GGDEF domain AS4_30870 PF03707 Bacterial signalling protein N terminal repeat AS4_30870 PF00563 EAL domain AS4_30880 PF01515 Phosphate acetyl/butaryl transferase AS4_30880 PF03949 Malic enzyme, NAD binding domain AS4_30880 PF00390 Malic enzyme, N-terminal domain AS4_30890 PF01743 Poly A polymerase head domain AS4_30890 PF12627 Probable RNA and SrmB- binding site of polymerase A AS4_30900 PF00152 tRNA synthetases class II (D, K and N) AS4_30910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AS4_30910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AS4_30910 PF11890 Domain of unknown function (DUF3410) AS4_30920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_30920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS4_30930 PF04055 Radical SAM superfamily AS4_30950 PF00576 HIUase/Transthyretin family AS4_30970 PF07943 Penicillin-binding protein 5, C-terminal domain AS4_30970 PF00768 D-alanyl-D-alanine carboxypeptidase AS4_30980 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_30990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS4_31000 PF03441 FAD binding domain of DNA photolyase AS4_31000 PF00875 DNA photolyase AS4_31020 PF03466 LysR substrate binding domain AS4_31020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_31050 PF00248 Aldo/keto reductase family AS4_31060 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AS4_31070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AS4_31080 PF02565 Recombination protein O C terminal AS4_31080 PF11967 Recombination protein O N terminal AS4_31100 PF07650 KH domain AS4_31100 PF01926 50S ribosome-binding GTPase AS4_31110 PF00035 Double-stranded RNA binding motif AS4_31110 PF14622 Ribonuclease-III-like AS4_31130 PF10502 Signal peptidase, peptidase S26 AS4_31140 PF06421 GTP-binding protein LepA C-terminus AS4_31140 PF03144 Elongation factor Tu domain 2 AS4_31140 PF00009 Elongation factor Tu GTP binding domain AS4_31140 PF00679 Elongation factor G C-terminus AS4_31160 PF04542 Sigma-70 region 2 AS4_31160 PF08281 Sigma-70, region 4 AS4_31180 PF00106 short chain dehydrogenase AS4_31190 PF00043 Glutathione S-transferase, C-terminal domain AS4_31190 PF02798 Glutathione S-transferase, N-terminal domain AS4_31210 PF01327 Polypeptide deformylase AS4_31250 PF01168 Alanine racemase, N-terminal domain AS4_31270 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AS4_31270 PF00117 Glutamine amidotransferase class-I AS4_31280 PF00392 Bacterial regulatory proteins, gntR family AS4_31280 PF00155 Aminotransferase class I and II AS4_31290 PF00561 alpha/beta hydrolase fold AS4_31300 PF03280 Proteobacterial lipase chaperone protein AS4_31320 PF12833 Helix-turn-helix domain AS4_31320 PF12852 Cupin AS4_31370 PF03797 Autotransporter beta-domain AS4_31370 PF12951 Passenger-associated-transport-repeat AS4_31370 PF00082 Subtilase family AS4_31380 PF03009 Glycerophosphoryl diester phosphodiesterase family AS4_31390 PF12833 Helix-turn-helix domain AS4_31420 PF13180 PDZ domain AS4_31430 PF02910 Fumarate reductase flavoprotein C-term AS4_31430 PF00890 FAD binding domain AS4_31440 PF12852 Cupin AS4_31440 PF12833 Helix-turn-helix domain AS4_31490 PF02223 Thymidylate kinase AS4_31500 PF02618 YceG-like family AS4_31540 PF00528 Binding-protein-dependent transport system inner membrane component AS4_31550 PF00528 Binding-protein-dependent transport system inner membrane component AS4_31560 PF12857 TOBE-like domain AS4_31560 PF00005 ABC transporter AS4_31570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_31570 PF03466 LysR substrate binding domain AS4_31600 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_31600 PF14602 Hexapeptide repeat of succinyl-transferase AS4_31600 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AS4_31610 PF04055 Radical SAM superfamily AS4_31620 PF06508 Queuosine biosynthesis protein QueC AS4_31650 PF00578 AhpC/TSA family AS4_31670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_31670 PF03466 LysR substrate binding domain AS4_31680 PF02798 Glutathione S-transferase, N-terminal domain AS4_31680 PF00043 Glutathione S-transferase, C-terminal domain AS4_31690 PF03466 LysR substrate binding domain AS4_31690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_31710 PF04264 YceI-like domain AS4_31720 PF00293 NUDIX domain AS4_31720 PF01467 Cytidylyltransferase-like AS4_31730 PF00378 Enoyl-CoA hydratase/isomerase AS4_31740 PF00881 Nitroreductase family AS4_31750 PF01784 NIF3 (NGG1p interacting factor 3) AS4_31760 PF00521 DNA gyrase/topoisomerase IV, subunit A AS4_31760 PF03989 DNA gyrase C-terminal domain, beta-propeller AS4_31790 PF01012 Electron transfer flavoprotein domain AS4_31790 PF00766 Electron transfer flavoprotein FAD-binding domain AS4_31800 PF01012 Electron transfer flavoprotein domain AS4_31810 PF01810 LysE type translocator AS4_31820 PF01037 Lrp/AsnC ligand binding domain AS4_31840 PF13302 Acetyltransferase (GNAT) domain AS4_31860 PF02899 Phage integrase, N-terminal SAM-like domain AS4_31860 PF00589 Phage integrase family AS4_31870 PF04389 Peptidase family M28 AS4_31880 PF02590 Predicted SPOUT methyltransferase AS4_31890 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AS4_31920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS4_31920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AS4_31940 PF04060 Putative Fe-S cluster AS4_31950 PF10576 Iron-sulfur binding domain of endonuclease III AS4_31950 PF00730 HhH-GPD superfamily base excision DNA repair protein AS4_31950 PF00633 Helix-hairpin-helix motif AS4_31980 PF05191 Adenylate kinase, active site lid AS4_32010 PF00905 Penicillin binding protein transpeptidase domain AS4_32010 PF03717 Penicillin-binding Protein dimerisation domain AS4_32070 PF00549 CoA-ligase AS4_32070 PF02629 CoA binding domain AS4_32080 PF08442 ATP-grasp domain AS4_32080 PF00549 CoA-ligase AS4_32090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_32090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS4_32100 PF02817 e3 binding domain AS4_32100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS4_32100 PF00364 Biotin-requiring enzyme AS4_32110 PF00676 Dehydrogenase E1 component AS4_32110 PF16870 2-oxoglutarate dehydrogenase C-terminal AS4_32110 PF02779 Transketolase, pyrimidine binding domain AS4_32110 PF16078 2-oxoglutarate dehydrogenase N-terminus AS4_32120 PF13085 2Fe-2S iron-sulfur cluster binding domain AS4_32130 PF02910 Fumarate reductase flavoprotein C-term AS4_32130 PF00890 FAD binding domain AS4_32140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AS4_32150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AS4_32160 PF00285 Citrate synthase, C-terminal domain AS4_32170 PF00854 POT family AS4_32180 PF01321 Creatinase/Prolidase N-terminal domain AS4_32180 PF00557 Metallopeptidase family M24 AS4_32210 PF00743 Flavin-binding monooxygenase-like AS4_32220 PF00106 short chain dehydrogenase AS4_32270 PF00795 Carbon-nitrogen hydrolase AS4_32270 PF02540 NAD synthase AS4_32300 PF00809 Pterin binding enzyme AS4_32310 PF01434 Peptidase family M41 AS4_32310 PF17862 AAA+ lid domain AS4_32310 PF00004 ATPase family associated with various cellular activities (AAA) AS4_32310 PF06480 FtsH Extracellular AS4_32330 PF01728 FtsJ-like methyltransferase AS4_32340 PF01985 CRS1 / YhbY (CRM) domain AS4_32370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AS4_32370 PF00117 Glutamine amidotransferase class-I AS4_32380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS4_32380 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS4_32380 PF02142 MGS-like domain AS4_32390 PF03449 Transcription elongation factor, N-terminal AS4_32390 PF01272 Transcription elongation factor, GreA/GreB, C-term AS4_32410 PF04072 Leucine carboxyl methyltransferase AS4_32420 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_32430 PF00324 Amino acid permease AS4_32450 PF02798 Glutathione S-transferase, N-terminal domain AS4_32450 PF14497 Glutathione S-transferase, C-terminal domain AS4_32480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS4_32490 PF00378 Enoyl-CoA hydratase/isomerase AS4_32520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS4_32530 PF00561 alpha/beta hydrolase fold AS4_32540 PF00999 Sodium/hydrogen exchanger family AS4_32550 PF04228 Putative neutral zinc metallopeptidase AS4_32560 PF05661 Protein of unknown function (DUF808) AS4_32570 PF00579 tRNA synthetases class I (W and Y) AS4_32580 PF00152 tRNA synthetases class II (D, K and N) AS4_32580 PF01336 OB-fold nucleic acid binding domain AS4_32620 PF00156 Phosphoribosyl transferase domain AS4_32630 PF00301 Rubredoxin AS4_32640 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_32640 PF18113 Rubredoxin binding C-terminal domain AS4_32650 PF12697 Alpha/beta hydrolase family AS4_32660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_32660 PF03466 LysR substrate binding domain AS4_32670 PF07690 Major Facilitator Superfamily AS4_32680 PF17941 Polyphosphate kinase C-terminal domain 1 AS4_32680 PF13090 Polyphosphate kinase C-terminal domain 2 AS4_32680 PF02503 Polyphosphate kinase middle domain AS4_32680 PF13089 Polyphosphate kinase N-terminal domain AS4_32690 PF00912 Transglycosylase AS4_32700 PF01694 Rhomboid family AS4_32720 PF00005 ABC transporter AS4_32730 PF13472 GDSL-like Lipase/Acylhydrolase family AS4_32770 PF01507 Phosphoadenosine phosphosulfate reductase family AS4_32780 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AS4_32780 PF06974 Protein of unknown function (DUF1298) AS4_32800 PF10150 Ribonuclease E/G family AS4_32800 PF00575 S1 RNA binding domain AS4_32810 PF02545 Maf-like protein AS4_32820 PF04093 rod shape-determining protein MreD AS4_32830 PF04085 rod shape-determining protein MreC AS4_32850 PF02686 Glu-tRNAGln amidotransferase C subunit AS4_32860 PF01425 Amidase AS4_32870 PF02637 GatB domain AS4_32870 PF02934 GatB/GatE catalytic domain AS4_32900 PF05163 DinB family AS4_32950 PF01431 Peptidase family M13 AS4_32950 PF05649 Peptidase family M13 AS4_32960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_32960 PF03466 LysR substrate binding domain AS4_33020 PF00593 TonB dependent receptor AS4_33020 PF07660 Secretin and TonB N terminus short domain AS4_33020 PF07715 TonB-dependent Receptor Plug Domain AS4_33030 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS4_33030 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS4_33050 PF02649 Type I GTP cyclohydrolase folE2 AS4_33070 PF01979 Amidohydrolase family AS4_33080 PF13411 MerR HTH family regulatory protein AS4_33090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_33090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS4_33110 PF00296 Luciferase-like monooxygenase AS4_33120 PF00593 TonB dependent receptor AS4_33120 PF07715 TonB-dependent Receptor Plug Domain AS4_33140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS4_33150 PF02472 Biopolymer transport protein ExbD/TolR AS4_33160 PF01618 MotA/TolQ/ExbB proton channel family AS4_33170 PF03544 Gram-negative bacterial TonB protein C-terminal AS4_33180 PF00296 Luciferase-like monooxygenase AS4_33200 PF09084 NMT1/THI5 like AS4_33210 PF00528 Binding-protein-dependent transport system inner membrane component AS4_33220 PF00528 Binding-protein-dependent transport system inner membrane component AS4_33230 PF00005 ABC transporter AS4_33240 PF02416 mttA/Hcf106 family AS4_33250 PF02416 mttA/Hcf106 family AS4_33260 PF00902 Sec-independent protein translocase protein (TatC) AS4_33270 PF00158 Sigma-54 interaction domain AS4_33280 PF00296 Luciferase-like monooxygenase AS4_33310 PF00593 TonB dependent receptor AS4_33310 PF07715 TonB-dependent Receptor Plug Domain AS4_33320 PF00664 ABC transporter transmembrane region AS4_33320 PF00005 ABC transporter AS4_33330 PF00005 ABC transporter AS4_33330 PF00664 ABC transporter transmembrane region AS4_33350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_33350 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AS4_33350 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_33360 PF00005 ABC transporter AS4_33360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AS4_33370 PF12911 N-terminal TM domain of oligopeptide transport permease C AS4_33370 PF00528 Binding-protein-dependent transport system inner membrane component AS4_33380 PF00528 Binding-protein-dependent transport system inner membrane component AS4_33390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AS4_33400 PF00296 Luciferase-like monooxygenase AS4_33430 PF00593 TonB dependent receptor AS4_33430 PF07715 TonB-dependent Receptor Plug Domain AS4_33440 PF01497 Periplasmic binding protein AS4_33450 PF00005 ABC transporter AS4_33460 PF01032 FecCD transport family AS4_33470 PF01032 FecCD transport family AS4_33480 PF00005 ABC transporter AS4_33490 PF04954 Siderophore-interacting protein AS4_33490 PF00005 ABC transporter AS4_33490 PF00664 ABC transporter transmembrane region AS4_33490 PF08021 Siderophore-interacting FAD-binding domain AS4_33520 PF00107 Zinc-binding dehydrogenase AS4_33520 PF08240 Alcohol dehydrogenase GroES-like domain AS4_33530 PF00106 short chain dehydrogenase AS4_33540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AS4_33540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_33550 PF02817 e3 binding domain AS4_33550 PF00364 Biotin-requiring enzyme AS4_33550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AS4_33560 PF02779 Transketolase, pyrimidine binding domain AS4_33560 PF02780 Transketolase, C-terminal domain AS4_33570 PF00676 Dehydrogenase E1 component AS4_33580 PF04055 Radical SAM superfamily AS4_33610 PF02028 BCCT, betaine/carnitine/choline family transporter AS4_33620 PF00440 Bacterial regulatory proteins, tetR family AS4_33620 PF13977 BetI-type transcriptional repressor, C-terminal AS4_33630 PF00171 Aldehyde dehydrogenase family AS4_33640 PF00732 GMC oxidoreductase AS4_33640 PF05199 GMC oxidoreductase AS4_33660 PF00440 Bacterial regulatory proteins, tetR family AS4_33670 PF07690 Major Facilitator Superfamily AS4_33710 PF00155 Aminotransferase class I and II AS4_33710 PF00392 Bacterial regulatory proteins, gntR family AS4_33730 PF00392 Bacterial regulatory proteins, gntR family AS4_33730 PF00155 Aminotransferase class I and II AS4_33740 PF00596 Class II Aldolase and Adducin N-terminal domain AS4_33750 PF00701 Dihydrodipicolinate synthetase family AS4_33770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS4_33770 PF00205 Thiamine pyrophosphate enzyme, central domain AS4_33770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS4_33780 PF00171 Aldehyde dehydrogenase family AS4_33790 PF03447 Homoserine dehydrogenase, NAD binding domain AS4_33790 PF01958 Domain of unknown function DUF108 AS4_33810 PF12697 Alpha/beta hydrolase family AS4_33830 PF07690 Major Facilitator Superfamily AS4_33840 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_33840 PF14759 Reductase C-terminal AS4_33850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AS4_33870 PF00355 Rieske [2Fe-2S] domain AS4_33890 PF00355 Rieske [2Fe-2S] domain AS4_33920 PF00196 Bacterial regulatory proteins, luxR family AS4_33920 PF03472 Autoinducer binding domain AS4_33930 PF01965 DJ-1/PfpI family AS4_33960 PF01638 HxlR-like helix-turn-helix AS4_33990 PF05593 RHS Repeat AS4_33990 PF03527 RHS protein AS4_34000 PF04717 Type VI secretion system, phage-baseplate injector AS4_34010 PF09278 MerR, DNA binding AS4_34010 PF00376 MerR family regulatory protein AS4_34030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS4_34040 PF00873 AcrB/AcrD/AcrF family AS4_34070 PF01126 Heme oxygenase AS4_34090 PF04542 Sigma-70 region 2 AS4_34090 PF08281 Sigma-70, region 4 AS4_34120 PF03466 LysR substrate binding domain AS4_34120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_34130 PF02447 GntP family permease AS4_34140 PF00291 Pyridoxal-phosphate dependent enzyme AS4_34160 PF03466 LysR substrate binding domain AS4_34160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_34240 PF05506 Domain of unknown function (DUF756) AS4_34240 PF04185 Phosphoesterase family AS4_34260 PF02470 MlaD protein AS4_34270 PF04403 Paraquat-inducible protein A AS4_34290 PF03466 LysR substrate binding domain AS4_34290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_34300 PF07690 Major Facilitator Superfamily AS4_34330 PF03412 Peptidase C39 family AS4_34330 PF00005 ABC transporter AS4_34330 PF00664 ABC transporter transmembrane region AS4_34370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_34370 PF03466 LysR substrate binding domain AS4_34380 PF02627 Carboxymuconolactone decarboxylase family AS4_34390 PF00171 Aldehyde dehydrogenase family AS4_34410 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AS4_34420 PF00171 Aldehyde dehydrogenase family AS4_34430 PF00296 Luciferase-like monooxygenase AS4_34440 PF01613 Flavin reductase like domain AS4_34450 PF12697 Alpha/beta hydrolase family AS4_34500 PF07690 Major Facilitator Superfamily AS4_34520 PF00355 Rieske [2Fe-2S] domain AS4_34530 PF00111 2Fe-2S iron-sulfur cluster binding domain AS4_34530 PF00175 Oxidoreductase NAD-binding domain AS4_34550 PF01494 FAD binding domain AS4_34560 PF01614 Bacterial transcriptional regulator AS4_34560 PF09339 IclR helix-turn-helix domain AS4_34580 PF00756 Putative esterase AS4_34590 PF04355 SmpA / OmlA family AS4_34600 PF03895 YadA-like membrane anchor domain AS4_34600 PF13018 Extended Signal Peptide of Type V secretion system AS4_34600 PF13018 Extended Signal Peptide of Type V secretion system AS4_34600 PF05662 Coiled stalk of trimeric autotransporter adhesin AS4_34600 PF05662 Coiled stalk of trimeric autotransporter adhesin AS4_34600 PF05662 Coiled stalk of trimeric autotransporter adhesin AS4_34600 PF05658 Head domain of trimeric autotransporter adhesin AS4_34600 PF05658 Head domain of trimeric autotransporter adhesin AS4_34600 PF03895 YadA-like membrane anchor domain AS4_34600 PF05658 Head domain of trimeric autotransporter adhesin AS4_34600 PF13018 Extended Signal Peptide of Type V secretion system AS4_34600 PF03895 YadA-like membrane anchor domain AS4_34610 PF02080 TrkA-C domain AS4_34610 PF06826 Predicted Permease Membrane Region AS4_34620 PF00155 Aminotransferase class I and II AS4_34640 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_34650 PF07848 PaaX-like protein AS4_34650 PF08223 PaaX-like protein C-terminal domain AS4_34660 PF00501 AMP-binding enzyme AS4_34660 PF14535 AMP-binding enzyme C-terminal domain AS4_34670 PF00108 Thiolase, N-terminal domain AS4_34670 PF02803 Thiolase, C-terminal domain AS4_34680 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AS4_34680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS4_34680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS4_34690 PF00378 Enoyl-CoA hydratase/isomerase AS4_34700 PF00378 Enoyl-CoA hydratase/isomerase AS4_34710 PF00970 Oxidoreductase FAD-binding domain AS4_34710 PF00111 2Fe-2S iron-sulfur cluster binding domain AS4_34710 PF00175 Oxidoreductase NAD-binding domain AS4_34720 PF01883 Iron-sulfur cluster assembly protein AS4_34730 PF05138 Phenylacetic acid catabolic protein AS4_34740 PF06243 Phenylacetic acid degradation B AS4_34750 PF05138 Phenylacetic acid catabolic protein AS4_34760 PF01575 MaoC like domain AS4_34760 PF00171 Aldehyde dehydrogenase family AS4_34770 PF07690 Major Facilitator Superfamily AS4_34770 PF00083 Sugar (and other) transporter AS4_34870 PF13784 Fic/DOC family N-terminal AS4_34870 PF02661 Fic/DOC family AS4_34890 PF03573 outer membrane porin, OprD family AS4_34900 PF07690 Major Facilitator Superfamily AS4_34910 PF07690 Major Facilitator Superfamily AS4_34930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AS4_34930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AS4_34940 PF01327 Polypeptide deformylase AS4_34960 PF08946 Osmosensory transporter coiled coil AS4_34960 PF00083 Sugar (and other) transporter AS4_34970 PF17151 Periplasmic sensor domain AS4_34970 PF00990 Diguanylate cyclase, GGDEF domain AS4_35020 PF07290 Protein of unknown function (DUF1449) AS4_35030 PF01145 SPFH domain / Band 7 family AS4_35030 PF15975 Flotillin AS4_35060 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AS4_35070 PF02492 CobW/HypB/UreG, nucleotide-binding domain AS4_35070 PF07683 Cobalamin synthesis protein cobW C-terminal domain AS4_35080 PF07969 Amidohydrolase family AS4_35090 PF01553 Acyltransferase AS4_35120 PF01810 LysE type translocator AS4_35140 PF01580 FtsK/SpoIIIE family AS4_35140 PF09397 Ftsk gamma domain AS4_35140 PF17854 FtsK alpha domain AS4_35140 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AS4_35150 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_35160 PF13847 Methyltransferase domain AS4_35160 PF10119 Predicted methyltransferase regulatory domain AS4_35170 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AS4_35180 PF04377 Arginine-tRNA-protein transferase, C terminus AS4_35180 PF04376 Arginine-tRNA-protein transferase, N terminus AS4_35190 PF00583 Acetyltransferase (GNAT) family AS4_35210 PF00009 Elongation factor Tu GTP binding domain AS4_35210 PF03143 Elongation factor Tu C-terminal domain AS4_35210 PF03144 Elongation factor Tu domain 2 AS4_35220 PF03144 Elongation factor Tu domain 2 AS4_35220 PF00009 Elongation factor Tu GTP binding domain AS4_35220 PF00679 Elongation factor G C-terminus AS4_35220 PF14492 Elongation Factor G, domain II AS4_35220 PF03764 Elongation factor G, domain IV AS4_35230 PF00177 Ribosomal protein S7p/S5e AS4_35240 PF00164 Ribosomal protein S12/S23 AS4_35260 PF07728 AAA domain (dynein-related subfamily) AS4_35280 PF05762 VWA domain containing CoxE-like protein AS4_35300 PF13569 Domain of unknown function (DUF4132) AS4_35310 PF13569 Domain of unknown function (DUF4132) AS4_35330 PF02801 Beta-ketoacyl synthase, C-terminal domain AS4_35330 PF00109 Beta-ketoacyl synthase, N-terminal domain AS4_35350 PF01757 Acyltransferase family AS4_35360 PF00324 Amino acid permease AS4_35380 PF01168 Alanine racemase, N-terminal domain AS4_35380 PF00842 Alanine racemase, C-terminal domain AS4_35390 PF01266 FAD dependent oxidoreductase AS4_35400 PF01037 Lrp/AsnC ligand binding domain AS4_35410 PF13419 Haloacid dehalogenase-like hydrolase AS4_35420 PF08543 Phosphomethylpyrimidine kinase AS4_35420 PF03070 TENA/THI-4/PQQC family AS4_35420 PF02581 Thiamine monophosphate synthase AS4_35440 PF02311 AraC-like ligand binding domain AS4_35440 PF12833 Helix-turn-helix domain AS4_35460 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS4_35460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS4_35470 PF00893 Small Multidrug Resistance protein AS4_35480 PF00893 Small Multidrug Resistance protein AS4_35510 PF00394 Multicopper oxidase AS4_35510 PF07731 Multicopper oxidase AS4_35510 PF07732 Multicopper oxidase AS4_35530 PF00834 Ribulose-phosphate 3 epimerase family AS4_35550 PF05987 Bacterial protein of unknown function (DUF898) AS4_35560 PF00756 Putative esterase AS4_35580 PF04445 Putative SAM-dependent methyltransferase AS4_35590 PF02673 Bacitracin resistance protein BacA AS4_35600 PF00814 Glycoprotease family AS4_35610 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_35620 PF00293 NUDIX domain AS4_35700 PF04715 Anthranilate synthase component I, N terminal region AS4_35700 PF00425 chorismate binding enzyme AS4_35710 PF00155 Aminotransferase class I and II AS4_35720 PF00815 Histidinol dehydrogenase AS4_35740 PF01634 ATP phosphoribosyltransferase AS4_35750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AS4_35760 PF01722 BolA-like protein AS4_35770 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AS4_35780 PF00309 Sigma-54 factor, Activator interacting domain (AID) AS4_35780 PF04963 Sigma-54 factor, core binding domain AS4_35780 PF04552 Sigma-54, DNA binding domain AS4_35800 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS4_35810 PF00528 Binding-protein-dependent transport system inner membrane component AS4_35820 PF00528 Binding-protein-dependent transport system inner membrane component AS4_35830 PF00005 ABC transporter AS4_35840 PF05643 Putative bacterial lipoprotein (DUF799) AS4_35860 PF03783 Curli production assembly/transport component CsgG AS4_35880 PF06100 MCRA family AS4_35910 PF08241 Methyltransferase domain AS4_35960 PF13533 Biotin-lipoyl like AS4_35970 PF00291 Pyridoxal-phosphate dependent enzyme AS4_36010 PF05552 Conserved TM helix AS4_36040 PF07690 Major Facilitator Superfamily AS4_36050 PF12805 FUSC-like inner membrane protein yccS AS4_36070 PF00667 FAD binding domain AS4_36070 PF00258 Flavodoxin AS4_36070 PF00175 Oxidoreductase NAD-binding domain AS4_36110 PF04304 Protein of unknown function (DUF454) AS4_36150 PF07687 Peptidase dimerisation domain AS4_36150 PF01546 Peptidase family M20/M25/M40 AS4_36170 PF00072 Response regulator receiver domain AS4_36170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_36170 PF01627 Hpt domain AS4_36170 PF01584 CheW-like domain AS4_36180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AS4_36180 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AS4_36190 PF01584 CheW-like domain AS4_36200 PF00072 Response regulator receiver domain AS4_36210 PF00072 Response regulator receiver domain AS4_36230 PF03129 Anticodon binding domain AS4_36230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AS4_36230 PF04073 Aminoacyl-tRNA editing domain AS4_36310 PF00692 dUTPase AS4_36340 PF01048 Phosphorylase superfamily AS4_36360 PF10609 NUBPL iron-transfer P-loop NTPase AS4_36430 PF01588 Putative tRNA binding domain AS4_36430 PF09334 tRNA synthetases class I (M) AS4_36460 PF13689 YfiR/HmsC-like AS4_36470 PF17152 Periplasmic sensor domain AS4_36470 PF00990 Diguanylate cyclase, GGDEF domain AS4_36490 PF02445 Quinolinate synthetase A protein AS4_36500 PF01960 ArgJ family AS4_36520 PF07517 SecA DEAD-like domain AS4_36520 PF02810 SEC-C motif AS4_36520 PF01043 SecA preprotein cross-linking domain AS4_36520 PF07516 SecA Wing and Scaffold domain AS4_36530 PF10417 C-terminal domain of 1-Cys peroxiredoxin AS4_36530 PF00578 AhpC/TSA family AS4_36540 PF04972 BON domain AS4_36540 PF01476 LysM domain AS4_36550 PF00550 Phosphopantetheine attachment site AS4_36570 PF00698 Acyl transferase domain AS4_36580 PF01783 Ribosomal L32p protein family AS4_36590 PF02620 Large ribosomal RNA subunit accumulation protein YceD AS4_36600 PF04315 Elongation factor P hydroxylase AS4_36610 PF01300 Telomere recombination AS4_36620 PF00753 Metallo-beta-lactamase superfamily AS4_36650 PF08245 Mur ligase middle domain AS4_36650 PF02875 Mur ligase family, glutamate ligase domain AS4_36660 PF01039 Carboxyl transferase domain AS4_36670 PF00290 Tryptophan synthase alpha chain AS4_36690 PF12833 Helix-turn-helix domain AS4_36690 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AS4_36730 PF05656 Protein of unknown function (DUF805) AS4_36740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AS4_36740 PF00378 Enoyl-CoA hydratase/isomerase AS4_36740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AS4_36750 PF00108 Thiolase, N-terminal domain AS4_36750 PF02803 Thiolase, C-terminal domain AS4_36770 PF00583 Acetyltransferase (GNAT) family AS4_36780 PF02311 AraC-like ligand binding domain AS4_36780 PF12833 Helix-turn-helix domain AS4_36790 PF02515 CoA-transferase family III AS4_36800 PF04966 Carbohydrate-selective porin, OprB family AS4_36810 PF01011 PQQ enzyme repeat AS4_36820 PF00293 NUDIX domain AS4_36850 PF07411 Domain of unknown function (DUF1508) AS4_36890 PF00155 Aminotransferase class I and II AS4_36900 PF06968 Biotin and Thiamin Synthesis associated domain AS4_36900 PF04055 Radical SAM superfamily AS4_36900 PF00202 Aminotransferase class-III AS4_36910 PF12697 Alpha/beta hydrolase family AS4_36930 PF00578 AhpC/TSA family AS4_36940 PF00210 Ferritin-like domain AS4_36950 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family AS4_36960 PF00593 TonB dependent receptor AS4_36960 PF07715 TonB-dependent Receptor Plug Domain AS4_36970 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AS4_36970 PF03120 NAD-dependent DNA ligase OB-fold domain AS4_36970 PF01653 NAD-dependent DNA ligase adenylation domain AS4_36970 PF12826 Helix-hairpin-helix motif AS4_36970 PF00533 BRCA1 C Terminus (BRCT) domain AS4_36990 PF02463 RecF/RecN/SMC N terminal domain AS4_36990 PF06470 SMC proteins Flexible Hinge Domain AS4_37010 PF01925 Sulfite exporter TauE/SafE AS4_37040 PF03309 Type III pantothenate kinase AS4_37070 PF02881 SRP54-type protein, helical bundle domain AS4_37070 PF02978 Signal peptide binding domain AS4_37070 PF00448 SRP54-type protein, GTPase domain AS4_37100 PF01207 Dihydrouridine synthase (Dus) AS4_37200 PF04717 Type VI secretion system, phage-baseplate injector AS4_37260 PF00291 Pyridoxal-phosphate dependent enzyme AS4_37270 PF13673 Acetyltransferase (GNAT) domain AS4_37300 PF03006 Haemolysin-III related AS4_37310 PF00083 Sugar (and other) transporter AS4_37310 PF07690 Major Facilitator Superfamily AS4_37330 PF00849 RNA pseudouridylate synthase AS4_37340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AS4_37340 PF00364 Biotin-requiring enzyme AS4_37340 PF00289 Biotin carboxylase, N-terminal domain AS4_37340 PF02785 Biotin carboxylase C-terminal domain AS4_37350 PF00378 Enoyl-CoA hydratase/isomerase AS4_37360 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_37360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_37360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_37370 PF01039 Carboxyl transferase domain AS4_37410 PF17932 Tetracyclin repressor-like, C-terminal domain AS4_37410 PF00440 Bacterial regulatory proteins, tetR family AS4_37420 PF13302 Acetyltransferase (GNAT) domain AS4_37450 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_37450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_37450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_37460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_37460 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_37460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_37470 PF00176 SNF2 family N-terminal domain AS4_37470 PF12419 SNF2 Helicase protein AS4_37470 PF00271 Helicase conserved C-terminal domain AS4_37520 PF00795 Carbon-nitrogen hydrolase AS4_37530 PF01047 MarR family AS4_37540 PF02566 OsmC-like protein AS4_37550 PF00437 Type II/IV secretion system protein AS4_37600 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AS4_37620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AS4_37620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AS4_37670 PF00291 Pyridoxal-phosphate dependent enzyme AS4_37680 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AS4_37690 PF00593 TonB dependent receptor AS4_37690 PF07715 TonB-dependent Receptor Plug Domain AS4_37700 PF01923 Cobalamin adenosyltransferase AS4_37740 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AS4_37760 PF04237 YjbR AS4_37770 PF00486 Transcriptional regulatory protein, C terminal AS4_37770 PF00072 Response regulator receiver domain AS4_37780 PF00672 HAMP domain AS4_37780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_37780 PF00512 His Kinase A (phospho-acceptor) domain AS4_37800 PF04751 Protein of unknown function (DUF615) AS4_37810 PF00381 PTS HPr component phosphorylation site AS4_37820 PF03668 P-loop ATPase protein family AS4_37830 PF02569 Pantoate-beta-alanine ligase AS4_37840 PF02548 Ketopantoate hydroxymethyltransferase AS4_37850 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AS4_37860 PF01743 Poly A polymerase head domain AS4_37860 PF12626 Polymerase A arginine-rich C-terminus AS4_37860 PF12627 Probable RNA and SrmB- binding site of polymerase A AS4_37880 PF03819 MazG nucleotide pyrophosphohydrolase domain AS4_37910 PF02824 TGS domain AS4_37910 PF13291 ACT domain AS4_37910 PF04607 Region found in RelA / SpoT proteins AS4_37920 PF05958 tRNA (Uracil-5-)-methyltransferase AS4_37940 PF00291 Pyridoxal-phosphate dependent enzyme AS4_37950 PF00672 HAMP domain AS4_37950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_37950 PF00512 His Kinase A (phospho-acceptor) domain AS4_37950 PF01627 Hpt domain AS4_37950 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AS4_37950 PF00072 Response regulator receiver domain AS4_37960 PF00378 Enoyl-CoA hydratase/isomerase AS4_37970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AS4_37970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AS4_37980 PF01261 Xylose isomerase-like TIM barrel AS4_38000 PF00909 Ammonium Transporter Family AS4_38000 PF00672 HAMP domain AS4_38020 PF01926 50S ribosome-binding GTPase AS4_38020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AS4_38030 PF13360 PQQ-like domain AS4_38050 PF03129 Anticodon binding domain AS4_38050 PF13393 Histidyl-tRNA synthetase AS4_38060 PF04551 GcpE protein AS4_38070 PF13464 Domain of unknown function (DUF4115) AS4_38090 PF04055 Radical SAM superfamily AS4_38100 PF00334 Nucleoside diphosphate kinase AS4_38110 PF04384 Iron-sulphur cluster assembly AS4_38120 PF01569 PAP2 superfamily AS4_38130 PF13439 Glycosyltransferase Family 4 AS4_38130 PF00534 Glycosyl transferases group 1 AS4_38160 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AS4_38160 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AS4_38170 PF10369 Small subunit of acetolactate synthase AS4_38180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AS4_38180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AS4_38180 PF00205 Thiamine pyrophosphate enzyme, central domain AS4_38200 PF13603 Leucyl-tRNA synthetase, Domain 2 AS4_38200 PF09334 tRNA synthetases class I (M) AS4_38200 PF08264 Anticodon-binding domain of tRNA AS4_38200 PF00133 tRNA synthetases class I (I, L, M and V) AS4_38230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS4_38240 PF12704 MacB-like periplasmic core domain AS4_38240 PF02687 FtsX-like permease family AS4_38240 PF00005 ABC transporter AS4_38250 PF02321 Outer membrane efflux protein AS4_38320 PF04717 Type VI secretion system, phage-baseplate injector AS4_38350 PF00929 Exonuclease AS4_38360 PF03193 RsgA GTPase AS4_38380 PF00462 Glutaredoxin AS4_38390 PF02556 Preprotein translocase subunit SecB AS4_38430 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AS4_38440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AS4_38440 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AS4_38450 PF07361 Cytochrome b562 AS4_38460 PF02441 Flavoprotein AS4_38460 PF04127 DNA / pantothenate metabolism flavoprotein AS4_38470 PF04002 RadC-like JAB domain AS4_38480 PF01062 Bestrophin, RFP-TM, chloride channel AS4_38570 PF03358 NADPH-dependent FMN reductase AS4_38580 PF03631 Virulence factor BrkB AS4_38600 PF01557 Fumarylacetoacetate (FAA) hydrolase family AS4_38650 PF07690 Major Facilitator Superfamily AS4_38660 PF01638 HxlR-like helix-turn-helix AS4_38670 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS4_38680 PF00497 Bacterial extracellular solute-binding proteins, family 3 AS4_38690 PF00005 ABC transporter AS4_38700 PF00528 Binding-protein-dependent transport system inner membrane component AS4_38710 PF00528 Binding-protein-dependent transport system inner membrane component AS4_38740 PF08206 Ribonuclease B OB domain AS4_38740 PF00773 RNB domain AS4_38740 PF08461 Ribonuclease R winged-helix domain AS4_38740 PF17876 Cold shock domain AS4_38740 PF00575 S1 RNA binding domain AS4_38760 PF01432 Peptidase family M3 AS4_38770 PF09526 Probable metal-binding protein (DUF2387) AS4_38860 PF03937 Flavinator of succinate dehydrogenase AS4_38880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_38880 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_38880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_38890 PF00743 Flavin-binding monooxygenase-like AS4_38900 PF01196 Ribosomal protein L17 AS4_38910 PF01000 RNA polymerase Rpb3/RpoA insert domain AS4_38910 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AS4_38910 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AS4_38920 PF01479 S4 domain AS4_38920 PF00163 Ribosomal protein S4/S9 N-terminal domain AS4_38930 PF00411 Ribosomal protein S11 AS4_38940 PF00416 Ribosomal protein S13/S18 AS4_38950 PF00444 Ribosomal protein L36 AS4_38960 PF00344 SecY translocase AS4_38970 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AS4_38980 PF00327 Ribosomal protein L30p/L7e AS4_38990 PF03719 Ribosomal protein S5, C-terminal domain AS4_38990 PF00333 Ribosomal protein S5, N-terminal domain AS4_39000 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AS4_39010 PF00347 Ribosomal protein L6 AS4_39020 PF00410 Ribosomal protein S8 AS4_39030 PF00253 Ribosomal protein S14p/S29e AS4_39040 PF00281 Ribosomal protein L5 AS4_39040 PF00673 ribosomal L5P family C-terminus AS4_39050 PF00467 KOW motif AS4_39050 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AS4_39060 PF00238 Ribosomal protein L14p/L23e AS4_39070 PF00366 Ribosomal protein S17 AS4_39080 PF00831 Ribosomal L29 protein AS4_39090 PF00252 Ribosomal protein L16p/L10e AS4_39100 PF00189 Ribosomal protein S3, C-terminal domain AS4_39100 PF07650 KH domain AS4_39110 PF00237 Ribosomal protein L22p/L17e AS4_39120 PF00203 Ribosomal protein S19 AS4_39130 PF03947 Ribosomal Proteins L2, C-terminal domain AS4_39130 PF00181 Ribosomal Proteins L2, RNA binding domain AS4_39140 PF00276 Ribosomal protein L23 AS4_39150 PF00573 Ribosomal protein L4/L1 family AS4_39160 PF00297 Ribosomal protein L3 AS4_39170 PF00338 Ribosomal protein S10p/S20e AS4_39180 PF00117 Glutamine amidotransferase class-I AS4_39190 PF01053 Cys/Met metabolism PLP-dependent enzyme AS4_39200 PF05872 Bacterial protein of unknown function (DUF853) AS4_39210 PF00175 Oxidoreductase NAD-binding domain AS4_39210 PF00042 Globin AS4_39210 PF00970 Oxidoreductase FAD-binding domain AS4_39220 PF02082 Transcriptional regulator AS4_39230 PF01926 50S ribosome-binding GTPase AS4_39250 PF00375 Sodium:dicarboxylate symporter family AS4_39270 PF01553 Acyltransferase AS4_39300 PF17191 RecG wedge domain AS4_39300 PF00271 Helicase conserved C-terminal domain AS4_39300 PF00270 DEAD/DEAH box helicase AS4_39320 PF00156 Phosphoribosyl transferase domain AS4_39330 PF00293 NUDIX domain AS4_39340 PF03641 Possible lysine decarboxylase AS4_39350 PF01544 CorA-like Mg2+ transporter protein AS4_39380 PF02470 MlaD protein AS4_39390 PF02405 Permease MlaE AS4_39400 PF00005 ABC transporter AS4_39410 PF12343 Cold shock protein DEAD box A AS4_39410 PF00271 Helicase conserved C-terminal domain AS4_39410 PF03880 DbpA RNA binding domain AS4_39410 PF00270 DEAD/DEAH box helicase AS4_39430 PF00459 Inositol monophosphatase family AS4_39440 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AS4_39440 PF02779 Transketolase, pyrimidine binding domain AS4_39440 PF02780 Transketolase, C-terminal domain AS4_39450 PF00925 GTP cyclohydrolase II AS4_39460 PF04055 Radical SAM superfamily AS4_39460 PF06969 HemN C-terminal domain AS4_39490 PF01488 Shikimate / quinate 5-dehydrogenase AS4_39490 PF08501 Shikimate dehydrogenase substrate binding domain AS4_39490 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AS4_39510 PF02770 Acyl-CoA dehydrogenase, middle domain AS4_39510 PF12806 Acetyl-CoA dehydrogenase C-terminal like AS4_39510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_39510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AS4_39530 PF04055 Radical SAM superfamily AS4_39530 PF06969 HemN C-terminal domain AS4_39550 PF01554 MatE AS4_39570 PF03109 ABC1 family AS4_39580 PF01197 Ribosomal protein L31 AS4_39590 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AS4_39650 PF03884 DNA gyrase inhibitor YacG AS4_39670 PF00753 Metallo-beta-lactamase superfamily AS4_39680 PF00762 Ferrochelatase AS4_39700 PF01177 Asp/Glu/Hydantoin racemase AS4_39760 PF01206 Sulfurtransferase TusA AS4_39770 PF00571 CBS domain AS4_39770 PF03471 Transporter associated domain AS4_39780 PF00795 Carbon-nitrogen hydrolase AS4_39790 PF01588 Putative tRNA binding domain AS4_39790 PF09334 tRNA synthetases class I (M) AS4_39820 PF08334 Type II secretion system (T2SS), protein G AS4_39820 PF07963 Prokaryotic N-terminal methylation motif AS4_39830 PF00482 Type II secretion system (T2SS), protein F AS4_39840 PF00271 Helicase conserved C-terminal domain AS4_39840 PF17764 3′ DNA-binding domain (3′BD) AS4_39840 PF18074 Primosomal protein N C-terminal domain AS4_39840 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AS4_39840 PF00270 DEAD/DEAH box helicase AS4_39880 PF00999 Sodium/hydrogen exchanger family AS4_39880 PF02254 TrkA-N domain AS4_39890 PF01430 Hsp33 protein AS4_39900 PF00226 DnaJ domain AS4_39900 PF01556 DnaJ C terminal domain AS4_39920 PF04325 Protein of unknown function (DUF465) AS4_39930 PF01544 CorA-like Mg2+ transporter protein AS4_39940 PF03725 3' exoribonuclease family, domain 2 AS4_39940 PF01138 3' exoribonuclease family, domain 1 AS4_39940 PF00013 KH domain AS4_39940 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AS4_39940 PF00575 S1 RNA binding domain AS4_39950 PF00312 Ribosomal protein S15 AS4_39970 PF13538 UvrD-like helicase C-terminal domain AS4_39980 PF13361 UvrD-like helicase C-terminal domain AS4_39980 PF00580 UvrD/REP helicase N-terminal domain AS4_39980 PF12705 PD-(D/E)XK nuclease superfamily AS4_39990 PF17946 RecC C-terminal domain AS4_40010 PF00881 Nitroreductase family AS4_40030 PF07690 Major Facilitator Superfamily AS4_40040 PF00857 Isochorismatase family AS4_40050 PF17645 Arylmalonate decarboxylase AS4_40060 PF00561 alpha/beta hydrolase fold AS4_40070 PF01494 FAD binding domain AS4_40090 PF12802 MarR family AS4_40100 PF03976 Polyphosphate kinase 2 (PPK2) AS4_40120 PF01209 ubiE/COQ5 methyltransferase family AS4_40140 PF03109 ABC1 family AS4_40160 PF01494 FAD binding domain AS4_40170 PF01502 Phosphoribosyl-AMP cyclohydrolase AS4_40220 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AS4_40220 PF00361 Proton-conducting membrane transporter AS4_40220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AS4_40220 PF13244 Domain of unknown function (DUF4040) AS4_40230 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AS4_40240 PF00361 Proton-conducting membrane transporter AS4_40260 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AS4_40280 PF00677 Lumazine binding domain AS4_40300 PF01638 HxlR-like helix-turn-helix AS4_40310 PF02525 Flavodoxin-like fold AS4_40320 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AS4_40320 PF07992 Pyridine nucleotide-disulphide oxidoreductase AS4_40330 PF00310 Glutamine amidotransferases class-II AS4_40330 PF04898 Glutamate synthase central domain AS4_40330 PF01645 Conserved region in glutamate synthase AS4_40330 PF01493 GXGXG motif AS4_40360 PF01761 3-dehydroquinate synthase AS4_40370 PF01202 Shikimate kinase AS4_40380 PF07660 Secretin and TonB N terminus short domain AS4_40380 PF03958 Bacterial type II/III secretion system short domain AS4_40380 PF00263 Bacterial type II and III secretion system protein AS4_40380 PF11741 AMIN domain AS4_40430 PF00905 Penicillin binding protein transpeptidase domain AS4_40430 PF17092 Penicillin-binding protein OB-like domain AS4_40430 PF00912 Transglycosylase AS4_40440 PF13847 Methyltransferase domain AS4_40450 PF00953 Glycosyl transferase family 4 AS4_40460 PF08245 Mur ligase middle domain AS4_40460 PF01225 Mur ligase family, catalytic domain AS4_40460 PF02875 Mur ligase family, glutamate ligase domain AS4_40470 PF02875 Mur ligase family, glutamate ligase domain AS4_40470 PF08245 Mur ligase middle domain AS4_40470 PF01225 Mur ligase family, catalytic domain AS4_40480 PF03717 Penicillin-binding Protein dimerisation domain AS4_40480 PF00905 Penicillin binding protein transpeptidase domain AS4_40490 PF04999 Cell division protein FtsL AS4_40500 PF01795 MraW methylase family AS4_40560 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS4_40580 PF01545 Cation efflux family AS4_40600 PF00873 AcrB/AcrD/AcrF family AS4_40610 PF00529 HlyD membrane-fusion protein of T1SS AS4_40610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AS4_40620 PF02321 Outer membrane efflux protein AS4_40650 PF00106 short chain dehydrogenase AS4_40680 PF03466 LysR substrate binding domain AS4_40680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AS4_40700 PF00550 Phosphopantetheine attachment site AS4_40700 PF00501 AMP-binding enzyme AS4_40700 PF13193 AMP-binding enzyme C-terminal domain AS4_40700 PF07993 Male sterility protein AS4_40700 PF00668 Condensation domain AS4_40710 PF13411 MerR HTH family regulatory protein AS4_40720 PF16921 Tex protein YqgF-like domain AS4_40720 PF09371 Tex-like protein N-terminal domain AS4_40720 PF00575 S1 RNA binding domain AS4_40720 PF17674 HHH domain AS4_40740 PF00486 Transcriptional regulatory protein, C terminal AS4_40740 PF00072 Response regulator receiver domain AS4_40750 PF00672 HAMP domain AS4_40750 PF00512 His Kinase A (phospho-acceptor) domain AS4_40750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_40760 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AS4_40760 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AS4_40770 PF00732 GMC oxidoreductase AS4_40770 PF05199 GMC oxidoreductase AS4_40780 PF00583 Acetyltransferase (GNAT) family AS4_40820 PF00475 Imidazoleglycerol-phosphate dehydratase AS4_40830 PF00117 Glutamine amidotransferase class-I AS4_40870 PF00977 Histidine biosynthesis protein AS4_40890 PF00892 EamA-like transporter family AS4_40920 PF01636 Phosphotransferase enzyme family AS4_40930 PF00977 Histidine biosynthesis protein AS4_40950 PF12848 ABC transporter AS4_40950 PF00005 ABC transporter AS4_40980 PF01053 Cys/Met metabolism PLP-dependent enzyme AS4_40990 PF01895 PhoU domain AS4_41020 PF01964 Radical SAM ThiC family AS4_41020 PF13667 ThiC-associated domain AS4_41030 PF00293 NUDIX domain AS4_41040 PF00149 Calcineurin-like phosphoesterase AS4_41050 PF01258 Prokaryotic dksA/traR C4-type zinc finger AS4_41060 PF00749 tRNA synthetases class I (E and Q), catalytic domain AS4_41080 PF01098 Cell cycle protein AS4_41090 PF02875 Mur ligase family, glutamate ligase domain AS4_41090 PF08245 Mur ligase middle domain AS4_41100 PF09335 SNARE associated Golgi protein AS4_41110 PF00677 Lumazine binding domain AS4_41120 PF02086 D12 class N6 adenine-specific DNA methyltransferase AS4_41130 PF01872 RibD C-terminal domain AS4_41130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AS4_41140 PF03477 ATP cone domain AS4_41150 PF00909 Ammonium Transporter Family AS4_41160 PF00543 Nitrogen regulatory protein P-II AS4_41180 PF13335 Magnesium chelatase, subunit ChlI C-terminal AS4_41180 PF01078 Magnesium chelatase, subunit ChlI AS4_41200 PF13508 Acetyltransferase (GNAT) domain AS4_41240 PF03573 outer membrane porin, OprD family AS4_41250 PF00719 Inorganic pyrophosphatase AS4_41280 PF13193 AMP-binding enzyme C-terminal domain AS4_41280 PF00501 AMP-binding enzyme AS4_41290 PF00521 DNA gyrase/topoisomerase IV, subunit A AS4_41290 PF03989 DNA gyrase C-terminal domain, beta-propeller AS4_41310 PF07690 Major Facilitator Superfamily AS4_41330 PF03458 UPF0126 domain AS4_41340 PF02810 SEC-C motif AS4_41350 PF00571 CBS domain AS4_41350 PF03471 Transporter associated domain AS4_41350 PF03741 Integral membrane protein TerC family AS4_41360 PF03641 Possible lysine decarboxylase AS4_41370 PF06942 GlpM protein AS4_41390 PF17755 UvrA DNA-binding domain AS4_41390 PF17760 UvrA interaction domain AS4_41410 PF00990 Diguanylate cyclase, GGDEF domain AS4_41410 PF08448 PAS fold AS4_41420 PF00905 Penicillin binding protein transpeptidase domain AS4_41440 PF02028 BCCT, betaine/carnitine/choline family transporter AS4_41460 PF00474 Sodium:solute symporter family AS4_41470 PF04341 Protein of unknown function, DUF485 AS4_41480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_41480 PF00072 Response regulator receiver domain AS4_41480 PF09456 RcsC Alpha-Beta-Loop (ABL) AS4_41480 PF00512 His Kinase A (phospho-acceptor) domain AS4_41520 PF07995 Glucose / Sorbosone dehydrogenase AS4_41540 PF00440 Bacterial regulatory proteins, tetR family AS4_41600 PF01327 Polypeptide deformylase AS4_41610 PF01476 LysM domain AS4_41620 PF17782 DprA winged helix domain AS4_41620 PF02481 DNA recombination-mediator protein A AS4_41630 PF01300 Telomere recombination AS4_41640 PF00892 EamA-like transporter family AS4_41650 PF00440 Bacterial regulatory proteins, tetR family AS4_41660 PF07690 Major Facilitator Superfamily AS4_41700 PF00255 Glutathione peroxidase AS4_41760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AS4_41770 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS4_41770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS4_41780 PF00231 ATP synthase AS4_41790 PF02874 ATP synthase alpha/beta family, beta-barrel domain AS4_41790 PF00306 ATP synthase alpha/beta chain, C terminal domain AS4_41790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AS4_41800 PF00213 ATP synthase delta (OSCP) subunit AS4_41810 PF00430 ATP synthase B/B' CF(0) AS4_41820 PF00137 ATP synthase subunit C AS4_41830 PF00119 ATP synthase A chain AS4_41850 PF01297 Zinc-uptake complex component A periplasmic AS4_41870 PF00005 ABC transporter AS4_41880 PF00950 ABC 3 transport family AS4_41890 PF01810 LysE type translocator AS4_41900 PF01810 LysE type translocator AS4_41910 PF04261 Dyp-type peroxidase family AS4_41950 PF04717 Type VI secretion system, phage-baseplate injector AS4_41950 PF16671 Actin cross-linking domain AS4_41960 PF03949 Malic enzyme, NAD binding domain AS4_41960 PF00390 Malic enzyme, N-terminal domain AS4_42000 PF03485 Arginyl tRNA synthetase N terminal domain AS4_42000 PF05746 DALR anticodon binding domain AS4_42000 PF00750 tRNA synthetases class I (R) AS4_42020 PF00072 Response regulator receiver domain AS4_42020 PF00486 Transcriptional regulatory protein, C terminal AS4_42030 PF00672 HAMP domain AS4_42030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AS4_42030 PF00512 His Kinase A (phospho-acceptor) domain AS4_42040 PF06123 Inner membrane protein CreD AS4_42080 PF11842 Domain of unknown function (DUF3362) AS4_42080 PF04055 Radical SAM superfamily AS4_42080 PF08497 Radical SAM N-terminal AS4_42090 PF07690 Major Facilitator Superfamily AS4_42100 PF00072 Response regulator receiver domain AS4_42100 PF00196 Bacterial regulatory proteins, luxR family AS4_42110 PF03358 NADPH-dependent FMN reductase AS4_42120 PF00296 Luciferase-like monooxygenase AS4_42130 PF00144 Beta-lactamase AS4_42140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AS4_42140 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AS4_42150 PF13193 AMP-binding enzyme C-terminal domain AS4_42150 PF16177 Acetyl-coenzyme A synthetase N-terminus AS4_42150 PF00501 AMP-binding enzyme AS4_42170 PF00924 Mechanosensitive ion channel AS4_42170 PF05552 Conserved TM helix AS4_42180 PF04452 RNA methyltransferase AS4_42190 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AS4_42200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AS4_42220 PF00472 RF-1 domain AS4_42220 PF03462 PCRF domain AS4_42260 PF02540 NAD synthase AS4_42260 PF00958 GMP synthase C terminal domain AS4_42260 PF00117 Glutamine amidotransferase class-I AS4_42270 PF07681 DoxX AS4_42280 PF09335 SNARE associated Golgi protein AS4_42300 PF13614 AAA domain AS4_42320 PF01722 BolA-like protein AS4_42350 PF00005 ABC transporter AS4_42350 PF00664 ABC transporter transmembrane region AS4_42370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AS4_42370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AS4_42370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AS4_42370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AS4_42400 PF16363 GDP-mannose 4,6 dehydratase AS4_42410 PF00342 Phosphoglucose isomerase AS4_42420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AS4_42420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AS4_42420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AS4_42430 PF00483 Nucleotidyl transferase AS4_42440 PF02397 Bacterial sugar transferase AS4_42460 PF01370 NAD dependent epimerase/dehydratase family AS4_42470 PF00132 Bacterial transferase hexapeptide (six repeats) AS4_42480 PF00535 Glycosyl transferase family 2 AS4_42540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS4_42550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AS4_42560 PF08485 Polysaccharide biosynthesis protein C-terminal AS4_42560 PF02719 Polysaccharide biosynthesis protein AS4_42570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AS4_42580 PF00483 Nucleotidyl transferase AS4_42590 PF04321 RmlD substrate binding domain AS4_42600 PF16363 GDP-mannose 4,6 dehydratase AS4_42620 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AS4_42620 PF10531 SLBB domain AS4_42620 PF02563 Polysaccharide biosynthesis/export protein AS4_42630 PF01451 Low molecular weight phosphotyrosine protein phosphatase AS4_42640 PF13807 G-rich domain on putative tyrosine kinase AS4_42640 PF13614 AAA domain AS4_42640 PF02706 Chain length determinant protein AS4_42650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS4_42650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AS4_42660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AS4_42660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AS4_42670 PF03023 Lipid II flippase MurJ AS4_42680 PF01510 N-acetylmuramoyl-L-alanine amidase AS4_42690 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AS4_42690 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AS4_42730 PF05506 Domain of unknown function (DUF756) AS4_42730 PF04185 Phosphoesterase family AS4_42740 PF03725 3' exoribonuclease family, domain 2 AS4_42740 PF01138 3' exoribonuclease family, domain 1 AS4_42760 PF12833 Helix-turn-helix domain AS4_42770 PF00487 Fatty acid desaturase AS4_42790 PF00440 Bacterial regulatory proteins, tetR family AS4_42800 PF01323 DSBA-like thioredoxin domain AS4_42820 PF13419 Haloacid dehalogenase-like hydrolase AS4_42840 PF00106 short chain dehydrogenase AS4_42890 PF00696 Amino acid kinase family AS4_42890 PF00583 Acetyltransferase (GNAT) family AS4_42900 PF09084 NMT1/THI5 like AS4_42910 PF09084 NMT1/THI5 like AS4_42920 PF00296 Luciferase-like monooxygenase AS4_42930 PF00528 Binding-protein-dependent transport system inner membrane component AS4_42940 PF00005 ABC transporter AS4_42950 PF00440 Bacterial regulatory proteins, tetR family AS4_42950 PF17938 Tetracyclin repressor-like, C-terminal domain AS4_42990 PF00691 OmpA family AS4_42990 PF05736 OprF membrane domain AS4_43100 PF10431 C-terminal, D2-small domain, of ClpB protein AS4_43100 PF00004 ATPase family associated with various cellular activities (AAA) AS4_43100 PF07724 AAA domain (Cdc48 subfamily) AS4_43100 PF17871 AAA lid domain AS4_43200 PF02872 5'-nucleotidase, C-terminal domain AS4_43200 PF00149 Calcineurin-like phosphoesterase AS4_43210 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AS4_43220 PF00528 Binding-protein-dependent transport system inner membrane component AS4_43230 PF00005 ABC transporter AS4_43240 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AS4_43300 PF01025 GrpE AS4_43310 PF00012 Hsp70 protein AS4_43320 PF09278 MerR, DNA binding AS4_43320 PF00376 MerR family regulatory protein AS4_43380 PF13406 Transglycosylase SLT domain AS4_43400 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AS4_43400 PF02222 ATP-grasp domain AS4_43410 PF00731 AIR carboxylase AS4_43450 PF01225 Mur ligase family, catalytic domain AS4_43450 PF02875 Mur ligase family, glutamate ligase domain AS4_43450 PF08245 Mur ligase middle domain AS4_43480 PF14542 GCN5-related N-acetyl-transferase AS4_43490 PF07690 Major Facilitator Superfamily AS4_43530 PF03741 Integral membrane protein TerC family AS4_43550 PF01979 Amidohydrolase family AS4_43560 PF00156 Phosphoribosyl transferase domain AS4_43570 PF04226 Transglycosylase associated protein AS4_43580 PF10411 Disulfide bond isomerase protein N-terminus AS4_43580 PF13098 Thioredoxin-like domain AS4_43590 PF01545 Cation efflux family AS4_43600 PF02583 Metal-sensitive transcriptional repressor AS4_43630 PF01926 50S ribosome-binding GTPase AS4_43630 PF12631 MnmE helical domain AS4_43630 PF10396 GTP-binding protein TrmE N-terminus AS4_43640 PF14849 YidC periplasmic domain AS4_43640 PF02096 60Kd inner membrane protein AS4_43650 PF01809 Putative membrane protein insertion efficiency factor AS4_43660 PF00825 Ribonuclease P AS4_43670 PF00468 Ribosomal protein L34