locus-tag	class	description
Ahae2126ch_00010	COG0592	DNA-directed DNA polymerase activity
Ahae2126ch_00020	COG0187	DNA topoisomerase II activity
Ahae2126ch_00025	COG0586	Pfam SNARE associated Golgi protein
Ahae2126ch_00030	COG0488	(ABC) transporter
Ahae2126ch_00055	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
Ahae2126ch_00060	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Ahae2126ch_00100	COG0471	metal ion transport
Ahae2126ch_00100	COG3273	potassium ion transport
Ahae2126ch_00110	COG1012	belongs to the aldehyde dehydrogenase family
Ahae2126ch_00115	COG3738	Protein conserved in bacteria
Ahae2126ch_00120	COG0733	neurotransmitter:sodium symporter activity
Ahae2126ch_00160	COG2233	PERMEase
Ahae2126ch_00175	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae2126ch_00190	COG0484	heat shock protein binding
Ahae2126ch_00205	COG2814	Major facilitator Superfamily
Ahae2126ch_00210	COG0656	L-ascorbic acid biosynthetic process
Ahae2126ch_00215	COG0583	DNA-binding transcription factor activity
Ahae2126ch_00225	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Ahae2126ch_00230	COG1064	alcohol dehydrogenase
Ahae2126ch_00235	COG2818	Glycosylase
Ahae2126ch_00250	COG1194	a g-specific adenine glycosylase
Ahae2126ch_00260	COG5487	UPF0391 membrane protein
Ahae2126ch_00265	COG2983	Belongs to the UPF0260 family
Ahae2126ch_00270	COG2133	pyrroloquinoline quinone binding
Ahae2126ch_00280	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Ahae2126ch_00290	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
Ahae2126ch_00300	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Ahae2126ch_00305	COG1335	isochorismatase
Ahae2126ch_00310	COG1522	sequence-specific DNA binding
Ahae2126ch_00345	COG2826	transposase and inactivated derivatives, IS30 family
Ahae2126ch_00385	COG2826	transposase and inactivated derivatives, IS30 family
Ahae2126ch_00400	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Ahae2126ch_00410	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
Ahae2126ch_00415	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Ahae2126ch_00420	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Ahae2126ch_00440	COG0560	Phosphoserine phosphatase
Ahae2126ch_00440	COG3830	Belongs to the UPF0237 family
Ahae2126ch_00480	COG2826	transposase and inactivated derivatives, IS30 family
Ahae2126ch_00495	COG1278	Cold shock
Ahae2126ch_00500	COG0583	DNA-binding transcription factor activity
Ahae2126ch_00530	COG0534	Mate efflux family protein
Ahae2126ch_00535	COG0436	Aminotransferase
Ahae2126ch_00545	COG2733	membrane
Ahae2126ch_00560	COG2918	glutathione biosynthetic process
Ahae2126ch_00575	COG3150	esterase
Ahae2126ch_00585	COG0534	Mate efflux family protein
Ahae2126ch_00640	COG1247	-acetyltransferase
Ahae2126ch_00670	COG0625	glutathione transferase activity
Ahae2126ch_00690	COG1393	Belongs to the ArsC family
Ahae2126ch_00695	COG0708	Exodeoxyribonuclease III
Ahae2126ch_00710	COG0300	oxidoreductase activity
Ahae2126ch_00735	COG0386	Belongs to the glutathione peroxidase family
Ahae2126ch_00740	COG0189	ligase activity
Ahae2126ch_00760	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Ahae2126ch_00815	COG2119	membrane
Ahae2126ch_00820	COG4774	siderophore transport
Ahae2126ch_00825	COG0426	domain, Protein
Ahae2126ch_00825	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Ahae2126ch_00850	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Ahae2126ch_00890	COG1902	pentaerythritol trinitrate reductase activity
Ahae2126ch_00895	COG1519	Transferase
Ahae2126ch_00905	COG0668	transmembrane transport
Ahae2126ch_00910	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Ahae2126ch_00940	COG3706	GGDEF domain
Ahae2126ch_00965	COG0351	phosphomethylpyrimidine kinase
Ahae2126ch_00965	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
Ahae2126ch_00965	COG0352	thiamine-phosphate diphosphorylase activity
Ahae2126ch_00975	COG2814	Major facilitator Superfamily
Ahae2126ch_01105	COG2390	Transcriptional regulator
Ahae2126ch_01105	COG4584	PFAM Integrase catalytic
Ahae2126ch_01110	COG1484	DNA-dependent DNA replication
Ahae2126ch_01135	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Ahae2126ch_01140	COG1012	belongs to the aldehyde dehydrogenase family
Ahae2126ch_01150	COG1335	isochorismatase
Ahae2126ch_01160	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
Ahae2126ch_01215	COG0582	viral genome integration into host DNA
Ahae2126ch_01225	COG3158	transport of potassium into the cell
Ahae2126ch_01240	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
Ahae2126ch_01260	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
Ahae2126ch_01280	COG0659	secondary active sulfate transmembrane transporter activity
Ahae2126ch_01295	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Ahae2126ch_01330	COG0427	acetyl-CoA hydrolase
Ahae2126ch_01335	COG2205	protein histidine kinase activity
Ahae2126ch_01340	COG0745	RESPONSE REGULATOR receiver
Ahae2126ch_01365	COG1028	Short-chain dehydrogenase reductase Sdr
Ahae2126ch_01370	COG0583	DNA-binding transcription factor activity
Ahae2126ch_01390	COG0789	Transcriptional regulator
Ahae2126ch_01395	COG3320	Male sterility
Ahae2126ch_01395	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Ahae2126ch_01400	COG4221	oxidoreductase activity
Ahae2126ch_01410	COG2873	o-acetylhomoserine
Ahae2126ch_01415	COG0488	(ABC) transporter
Ahae2126ch_01485	COG0833	amino acid
Ahae2126ch_01510	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Ahae2126ch_01530	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Ahae2126ch_01535	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Ahae2126ch_01540	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Ahae2126ch_01545	COG2226	methyltransferase
Ahae2126ch_01595	COG0069	glutamate synthase activity
Ahae2126ch_01595	COG0067	glutamate synthase
Ahae2126ch_01595	COG0070	glutamate synthase
Ahae2126ch_01600	COG0493	'glutamate synthase
Ahae2126ch_01610	COG1704	LemA family
Ahae2126ch_01615	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
Ahae2126ch_01630	COG1487	ribonuclease activity
Ahae2126ch_01655	COG3307	-O-antigen
Ahae2126ch_01675	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Ahae2126ch_01685	COG0194	GDP metabolic process
Ahae2126ch_01690	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Ahae2126ch_01695	COG4969	Belongs to the N-Me-Phe pilin family
Ahae2126ch_01765	COG0228	four-way junction DNA binding
Ahae2126ch_01770	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Ahae2126ch_01780	COG0335	large ribosomal subunit rRNA binding
Ahae2126ch_01790	COG5380	lipid catabolic process
Ahae2126ch_01795	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Ahae2126ch_01830	COG0741	lytic transglycosylase activity
Ahae2126ch_01830	COG0739	heme binding
Ahae2126ch_01830	COG1196	nuclear chromosome segregation
Ahae2126ch_01835	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Ahae2126ch_01840	COG0277	FAD linked oxidase domain protein
Ahae2126ch_01855	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
Ahae2126ch_01885	COG1289	transmembrane transporter activity
Ahae2126ch_01890	COG0628	permease
Ahae2126ch_01895	COG1192	Involved in chromosome partitioning
Ahae2126ch_01905	COG2226	methyltransferase
Ahae2126ch_01940	COG1404	Belongs to the peptidase S8 family
Ahae2126ch_01950	COG2072	flavoprotein involved in K transport
Ahae2126ch_02000	COG0471	metal ion transport
Ahae2126ch_02010	COG1983	PspC domain protein
Ahae2126ch_02020	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_02085	COG1127	ABC transporter
Ahae2126ch_02090	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Ahae2126ch_02095	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Ahae2126ch_02100	COG2854	intermembrane phospholipid transfer
Ahae2126ch_02115	COG0598	Magnesium transport protein CorA
Ahae2126ch_02130	COG1040	competence protein
Ahae2126ch_02135	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Ahae2126ch_02150	COG2937	Belongs to the GPAT DAPAT family
Ahae2126ch_02155	COG1946	Acyl-CoA thioesterase
Ahae2126ch_02160	COG1301	dicarboxylic acid transport
Ahae2126ch_02185	COG1959	2 iron, 2 sulfur cluster binding
Ahae2126ch_02195	COG0433	COG0433 Predicted ATPase
Ahae2126ch_02215	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Ahae2126ch_02235	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Ahae2126ch_02285	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Ahae2126ch_02370	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_02375	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
Ahae2126ch_02400	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
Ahae2126ch_02425	COG0339	signal peptide processing
Ahae2126ch_02430	COG0557	exoribonuclease II activity
Ahae2126ch_02510	COG0179	Fumarylacetoacetate (FAA) hydrolase
Ahae2126ch_02520	COG2207	Transcriptional regulator
Ahae2126ch_02530	COG1295	ribonuclease BN
Ahae2126ch_02570	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Ahae2126ch_02595	COG2813	Specifically methylates the guanine in position
Ahae2126ch_02595	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Ahae2126ch_02605	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Ahae2126ch_02610	COG4771	TonB-dependent receptor
Ahae2126ch_02620	COG0740	serine-type endopeptidase activity
Ahae2126ch_02640	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
Ahae2126ch_02640	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
Ahae2126ch_02645	COG2207	Transcriptional regulator
Ahae2126ch_02645	COG1917	Cupin 2, conserved barrel domain protein
Ahae2126ch_02650	COG0697	spore germination
Ahae2126ch_02665	COG0857	belongs to the CobB CobQ family
Ahae2126ch_02665	COG0280	phosphate acetyltransferase
Ahae2126ch_02670	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Ahae2126ch_02685	COG2267	carboxylic ester hydrolase activity
Ahae2126ch_02700	COG0793	Belongs to the peptidase S41A family
Ahae2126ch_02725	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Ahae2126ch_02735	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Ahae2126ch_02740	COG1408	metallophosphoesterase
Ahae2126ch_02750	COG2199	diguanylate cyclase activity
Ahae2126ch_02790	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_02805	COG1309	transcriptional regulator
Ahae2126ch_02905	COG2969	positive regulation of protein catabolic process
Ahae2126ch_02910	COG0625	glutathione transferase activity
Ahae2126ch_02915	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Ahae2126ch_02920	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Ahae2126ch_02930	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
Ahae2126ch_02935	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Ahae2126ch_02940	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Ahae2126ch_02955	COG2975	iron-sulfur cluster assembly
Ahae2126ch_02975	COG1426	Protein conserved in bacteria
Ahae2126ch_03010	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Ahae2126ch_03020	COG1862	Preprotein translocase
Ahae2126ch_03055	COG5002	protein histidine kinase activity
Ahae2126ch_03055	COG0784	Response regulator, receiver
Ahae2126ch_03055	COG2205	protein histidine kinase activity
Ahae2126ch_03060	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
Ahae2126ch_03070	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
Ahae2126ch_03095	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Ahae2126ch_03095	COG2755	lipolytic protein G-D-S-L family
Ahae2126ch_03130	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Ahae2126ch_03170	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_03175	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_03185	COG2205	protein histidine kinase activity
Ahae2126ch_03190	COG0745	RESPONSE REGULATOR receiver
Ahae2126ch_03210	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
Ahae2126ch_03230	COG2096	Adenosyltransferase
Ahae2126ch_03235	COG4206	TonB-dependent receptor
Ahae2126ch_03285	COG0285	dihydrofolate synthase activity
Ahae2126ch_03300	COG0450	alkyl hydroperoxide reductase
Ahae2126ch_03320	COG0477	Major facilitator Superfamily
Ahae2126ch_03325	COG1272	protein, Hemolysin III
Ahae2126ch_03355	COG1250	3-hydroxyacyl-CoA dehydrogenase
Ahae2126ch_03355	COG1024	Enoyl-CoA hydratase
Ahae2126ch_03360	COG0183	Belongs to the thiolase family
Ahae2126ch_03370	COG2207	Transcriptional regulator
Ahae2126ch_03375	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Ahae2126ch_03390	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Ahae2126ch_03405	COG0183	Belongs to the thiolase family
Ahae2126ch_03415	COG2885	chlorophyll binding
Ahae2126ch_03415	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Ahae2126ch_03420	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
Ahae2126ch_03420	COG2885	chlorophyll binding
Ahae2126ch_03425	COG1690	Belongs to the RtcB family
Ahae2126ch_03430	COG0833	amino acid
Ahae2126ch_03440	COG2233	PERMEase
Ahae2126ch_03475	COG4772	TonB-dependent receptor
Ahae2126ch_03485	COG0354	folic acid binding
Ahae2126ch_03495	COG2824	Alkylphosphonate utilization operon protein PhnA
Ahae2126ch_03500	COG3422	double-strand break repair
Ahae2126ch_03535	COG0840	transmembrane signaling receptor activity
Ahae2126ch_03540	COG2198	Histidine kinase
Ahae2126ch_03540	COG0643	Histidine kinase
Ahae2126ch_03540	COG0643	Histidine kinase
Ahae2126ch_03540	COG2198	Histidine kinase
Ahae2126ch_03555	COG5510	response to toxic substance
Ahae2126ch_03565	COG2832	Protein of unknown function (DUF454)
Ahae2126ch_03570	COG1376	ErfK ybiS ycfS ynhG family protein
Ahae2126ch_03615	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
Ahae2126ch_03630	COG1289	transmembrane transporter activity
Ahae2126ch_03635	COG2814	Major facilitator Superfamily
Ahae2126ch_03650	COG0786	glutamate:sodium symporter activity
Ahae2126ch_03655	COG1115	amino acid carrier protein
Ahae2126ch_03660	COG1752	Esterase of the alpha-beta hydrolase superfamily
Ahae2126ch_03665	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
Ahae2126ch_03705	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Ahae2126ch_03715	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Ahae2126ch_03720	COG1077	Cell shape determining protein MreB Mrl
Ahae2126ch_03725	COG1792	Involved in formation and maintenance of cell shape
Ahae2126ch_03735	COG0424	maF-like protein
Ahae2126ch_03740	COG1530	ribonuclease E activity
Ahae2126ch_03750	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Ahae2126ch_03760	COG0560	Phosphoserine phosphatase
Ahae2126ch_03800	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Ahae2126ch_03825	COG1113	amino acid transport
Ahae2126ch_03835	COG0142	geranyltranstransferase activity
Ahae2126ch_03850	COG1752	Esterase of the alpha-beta hydrolase superfamily
Ahae2126ch_03875	COG2194	sulfuric ester hydrolase activity
Ahae2126ch_03880	COG0745	RESPONSE REGULATOR receiver
Ahae2126ch_03885	COG0642	Histidine kinase
Ahae2126ch_03895	COG1126	abc transporter atp-binding protein
Ahae2126ch_03900	COG0765	amino acid transport
Ahae2126ch_03905	COG0765	amino acid transport
Ahae2126ch_03915	COG0004	ammonium transporteR
Ahae2126ch_03930	COG2852	Protein conserved in bacteria
Ahae2126ch_03950	COG0525	valine-tRNA ligase activity
Ahae2126ch_03965	COG1028	Short-chain dehydrogenase reductase Sdr
Ahae2126ch_03975	COG0393	Putative heavy-metal-binding
Ahae2126ch_03980	COG0393	Putative heavy-metal-binding
Ahae2126ch_03985	COG1538	Outer membrane efflux protein
Ahae2126ch_03995	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae2126ch_04000	COG0671	phosphoesterase, PA-phosphatase related
Ahae2126ch_04030	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
Ahae2126ch_04045	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Ahae2126ch_04045	COG1648	precorrin-2 dehydrogenase activity
Ahae2126ch_04050	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Ahae2126ch_04060	COG1733	regulation of RNA biosynthetic process
Ahae2126ch_04070	COG0531	amino acid
Ahae2126ch_04085	COG0321	lipoyl(octanoyl) transferase activity
Ahae2126ch_04115	COG1280	lysine exporter protein (LysE YggA)
Ahae2126ch_04125	COG0500	methyltransferase
Ahae2126ch_04130	COG0586	Pfam SNARE associated Golgi protein
Ahae2126ch_04150	COG2009	succinate dehydrogenase
Ahae2126ch_04155	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
Ahae2126ch_04160	COG1053	succinate dehydrogenase
Ahae2126ch_04165	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Ahae2126ch_04185	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Ahae2126ch_04210	COG2801	Transposase and inactivated derivatives
Ahae2126ch_04215	COG2268	Band 7 protein
Ahae2126ch_04220	COG1585	Membrane protein implicated in regulation of membrane protease activity
Ahae2126ch_04225	COG2826	transposase and inactivated derivatives, IS30 family
Ahae2126ch_04235	COG2354	Protein conserved in bacteria
Ahae2126ch_04240	COG2321	neutral zinc metallopeptidase
Ahae2126ch_04290	COG0110	maltose O-acetyltransferase activity
Ahae2126ch_04315	COG0505	Belongs to the CarA family
Ahae2126ch_04340	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Ahae2126ch_04360	COG2304	oxidoreductase activity
Ahae2126ch_04405	COG0584	glycerophosphoryl diester phosphodiesterase
Ahae2126ch_04410	COG2194	sulfuric ester hydrolase activity
Ahae2126ch_04415	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Ahae2126ch_04420	COG2239	Acts as a magnesium transporter
Ahae2126ch_04430	COG0501	Belongs to the peptidase M48B family
Ahae2126ch_04435	COG0741	lytic transglycosylase activity
Ahae2126ch_04435	COG0739	heme binding
Ahae2126ch_04435	COG1196	nuclear chromosome segregation
Ahae2126ch_04455	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
Ahae2126ch_04460	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Ahae2126ch_04470	COG0582	viral genome integration into host DNA
Ahae2126ch_04550	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Ahae2126ch_04555	COG0569	domain protein
Ahae2126ch_04560	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Ahae2126ch_04565	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
Ahae2126ch_04570	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
Ahae2126ch_04575	COG2205	protein histidine kinase activity
Ahae2126ch_04580	COG0745	RESPONSE REGULATOR receiver
Ahae2126ch_04585	COG0174	glutamine synthetase
Ahae2126ch_04680	COG2184	nucleotidyltransferase activity
Ahae2126ch_04690	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
Ahae2126ch_04740	COG2233	PERMEase
Ahae2126ch_04745	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Ahae2126ch_04750	COG0251	oxidation-reduction process
Ahae2126ch_04755	COG1335	isochorismatase
Ahae2126ch_04760	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Ahae2126ch_04765	COG0778	Nitroreductase
Ahae2126ch_04770	COG0596	Alpha beta hydrolase
Ahae2126ch_04785	COG0582	viral genome integration into host DNA
Ahae2126ch_04810	COG1301	dicarboxylic acid transport
Ahae2126ch_04845	COG0725	ABC transporter, periplasmic molybdate-binding protein
Ahae2126ch_04850	COG4149	molybdate abc transporter
Ahae2126ch_04865	COG4521	taurine ABC transporter
Ahae2126ch_04870	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
Ahae2126ch_04875	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ahae2126ch_04880	COG2175	clavaminate synthase activity
Ahae2126ch_04910	COG0589	response to stress
Ahae2126ch_04925	COG0242	peptide deformylase activity
Ahae2126ch_04930	COG2852	Protein conserved in bacteria
Ahae2126ch_04950	COG0306	phosphate transporter
Ahae2126ch_04965	COG1115	amino acid carrier protein
Ahae2126ch_04975	COG0019	diaminopimelate decarboxylase activity
Ahae2126ch_04980	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Ahae2126ch_04990	COG1280	lysine exporter protein (LysE YggA)
Ahae2126ch_04995	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Ahae2126ch_05010	COG2318	DinB family
Ahae2126ch_05020	COG0842	Transport permease protein
Ahae2126ch_05030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae2126ch_05055	COG1671	Belongs to the UPF0178 family
Ahae2126ch_05070	COG4591	ABC-type transport system involved in lipoprotein release permease component
Ahae2126ch_05075	COG1136	(ABC) transporter
Ahae2126ch_05080	COG0658	competence protein
Ahae2126ch_05080	COG2333	competence protein COMEC
Ahae2126ch_05090	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Ahae2126ch_05090	COG0616	signal peptide processing
Ahae2126ch_05100	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Ahae2126ch_05110	COG0628	permease
Ahae2126ch_05180	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Ahae2126ch_05200	COG0823	Involved in the tonB-independent uptake of proteins
Ahae2126ch_05220	COG0824	Thioesterase
Ahae2126ch_05245	COG2255	four-way junction helicase activity
Ahae2126ch_05265	COG0047	phosphoribosylformylglycinamidine synthase activity
Ahae2126ch_05265	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Ahae2126ch_05295	COG3323	Protein of unknown function (DUF1653)
Ahae2126ch_05295	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Ahae2126ch_05300	COG0778	Nitroreductase
Ahae2126ch_05310	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Ahae2126ch_05310	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Ahae2126ch_05310	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
Ahae2126ch_05315	COG1105	Belongs to the carbohydrate kinase PfkB family
Ahae2126ch_05320	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
Ahae2126ch_05320	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Ahae2126ch_05325	COG1024	Enoyl-CoA hydratase
Ahae2126ch_05330	COG1056	cytidyltransferase-related domain
Ahae2126ch_05330	COG1051	belongs to the nudix hydrolase family
Ahae2126ch_05335	COG0583	DNA-binding transcription factor activity
Ahae2126ch_05340	COG1942	4-Oxalocrotonate Tautomerase
Ahae2126ch_05365	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Ahae2126ch_05380	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Ahae2126ch_05385	COG0602	queuosine metabolic process
Ahae2126ch_05400	COG0583	DNA-binding transcription factor activity
Ahae2126ch_05405	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Ahae2126ch_05410	COG4208	sulfate ABC transporter
Ahae2126ch_05415	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
Ahae2126ch_05425	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Ahae2126ch_05435	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Ahae2126ch_05440	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Ahae2126ch_05485	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Ahae2126ch_05495	COG0481	GTPase activity
Ahae2126ch_05510	COG0571	ribonuclease III activity
Ahae2126ch_05515	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Ahae2126ch_05530	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
Ahae2126ch_05555	COG0436	Aminotransferase
Ahae2126ch_05585	COG0556	nucleotide-excision repair
Ahae2126ch_05590	COG3293	Transposase
Ahae2126ch_05640	COG1840	ABC-type Fe3 transport system, periplasmic component
Ahae2126ch_05645	COG3842	ATPase activity
Ahae2126ch_05665	COG0583	DNA-binding transcription factor activity
Ahae2126ch_05670	COG0596	Alpha beta hydrolase
Ahae2126ch_05675	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Ahae2126ch_05680	COG1773	rubredoxin
Ahae2126ch_05690	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
Ahae2126ch_05700	COG0175	sulfate reduction
Ahae2126ch_05715	COG0222	ribosome binding
Ahae2126ch_05720	COG1253	flavin adenine dinucleotide binding
Ahae2126ch_05740	COG3015	lipoprotein NlpE involved in copper resistance
Ahae2126ch_05760	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Ahae2126ch_05760	COG0517	IMP dehydrogenase activity
Ahae2126ch_05765	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Ahae2126ch_05775	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
Ahae2126ch_05780	COG1137	ATPase activity
Ahae2126ch_05805	COG1739	Uncharacterized protein family UPF0029
Ahae2126ch_05820	COG4122	O-methyltransferase activity
Ahae2126ch_05830	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Ahae2126ch_05910	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Ahae2126ch_05940	COG0204	Acyl-transferase
Ahae2126ch_05945	COG4783	chaperone-mediated protein folding
Ahae2126ch_05965	COG1610	YqeY-like protein
Ahae2126ch_06035	COG1414	Transcriptional regulator
Ahae2126ch_06055	COG1028	Short-chain dehydrogenase reductase Sdr
Ahae2126ch_06065	COG0446	pyridine nucleotide-disulphide oxidoreductase
Ahae2126ch_06070	COG2271	Major facilitator Superfamily
Ahae2126ch_06085	COG1028	Short-chain dehydrogenase reductase Sdr
Ahae2126ch_06100	COG0028	Belongs to the TPP enzyme family
Ahae2126ch_06120	COG0482	sulfurtransferase activity
Ahae2126ch_06135	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Ahae2126ch_06140	COG1686	Belongs to the peptidase S11 family
Ahae2126ch_06160	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
Ahae2126ch_06170	COG0583	DNA-binding transcription factor activity
Ahae2126ch_06175	COG1067	ATP-dependent peptidase activity
Ahae2126ch_06195	COG0254	rRNA binding
Ahae2126ch_06215	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Ahae2126ch_06220	COG1966	Carbon starvation protein
Ahae2126ch_06225	COG2879	small protein
Ahae2126ch_06230	COG0714	Associated with various cellular activities
Ahae2126ch_06330	COG1785	Belongs to the alkaline phosphatase family
Ahae2126ch_06370	COG3604	Transcriptional regulator
Ahae2126ch_06395	COG2144	transferase activity, transferring acyl groups
Ahae2126ch_06405	COG2072	flavoprotein involved in K transport
Ahae2126ch_06465	COG0732	type I restriction modification DNA specificity domain
Ahae2126ch_06495	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
Ahae2126ch_06500	COG2116	formate transmembrane transporter activity
Ahae2126ch_06505	COG0515	serine threonine protein kinase
Ahae2126ch_06535	COG1741	Belongs to the pirin family
Ahae2126ch_06550	COG0446	pyridine nucleotide-disulphide oxidoreductase
Ahae2126ch_06550	COG1902	pentaerythritol trinitrate reductase activity
Ahae2126ch_06585	COG2995	paraquat-inducible protein a
Ahae2126ch_06590	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Ahae2126ch_06590	COG3008	intermembrane lipid transfer
Ahae2126ch_06630	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ahae2126ch_06645	COG0583	DNA-binding transcription factor activity
Ahae2126ch_06655	COG2188	Transcriptional regulator
Ahae2126ch_06675	COG0010	Belongs to the arginase family
Ahae2126ch_06680	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Ahae2126ch_06685	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Ahae2126ch_06720	COG0243	molybdopterin cofactor binding
Ahae2126ch_06725	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Ahae2126ch_06730	COG2837	iron assimilation
Ahae2126ch_06740	COG1538	Outer membrane efflux protein
Ahae2126ch_06745	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Ahae2126ch_06750	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae2126ch_06755	COG0745	RESPONSE REGULATOR receiver
Ahae2126ch_06760	COG5002	protein histidine kinase activity
Ahae2126ch_06765	COG3040	lipid binding
Ahae2126ch_06805	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Ahae2126ch_06815	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Ahae2126ch_06825	COG2801	Transposase and inactivated derivatives
Ahae2126ch_06855	COG1309	transcriptional regulator
Ahae2126ch_06875	COG2072	flavoprotein involved in K transport
Ahae2126ch_06880	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
Ahae2126ch_06885	COG1560	Kdo2-lipid A biosynthetic process
Ahae2126ch_06890	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
Ahae2126ch_06895	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
Ahae2126ch_06900	COG4770	biotin carboxylase activity
Ahae2126ch_06905	COG0501	Belongs to the peptidase M48B family
Ahae2126ch_06915	COG1765	OsmC-like protein
Ahae2126ch_06965	COG4133	protoheme IX ABC transporter activity
Ahae2126ch_07000	COG0308	aminopeptidase N
Ahae2126ch_07005	COG1760	l-serine dehydratase
Ahae2126ch_07025	COG1714	RDD family
Ahae2126ch_07035	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Ahae2126ch_07035	COG0475	glutathione-regulated potassium exporter activity
Ahae2126ch_07040	COG3135	benzoate transporter
Ahae2126ch_07050	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Ahae2126ch_07055	COG0583	DNA-binding transcription factor activity
Ahae2126ch_07075	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Ahae2126ch_07105	COG0316	Belongs to the HesB IscA family
Ahae2126ch_07110	COG0822	iron-sulfur transferase activity
Ahae2126ch_07135	COG0776	regulation of translation
Ahae2126ch_07140	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Ahae2126ch_07155	COG2137	regulation of response to DNA damage stimulus
Ahae2126ch_07165	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Ahae2126ch_07170	COG1011	Hydrolase
Ahae2126ch_07175	COG1218	3'(2'),5'-bisphosphate nucleotidase
Ahae2126ch_07195	COG0268	Binds directly to 16S ribosomal RNA
Ahae2126ch_07200	COG0702	epimerase
Ahae2126ch_07205	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
Ahae2126ch_07230	COG0183	Belongs to the thiolase family
Ahae2126ch_07275	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Ahae2126ch_07280	COG0583	DNA-binding transcription factor activity
Ahae2126ch_07285	COG0424	maF-like protein
Ahae2126ch_07345	COG1286	toxin biosynthetic process
Ahae2126ch_07390	COG3634	alkyl hydroperoxide reductase activity
Ahae2126ch_07425	COG0436	Aminotransferase
Ahae2126ch_07430	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Ahae2126ch_07435	COG0386	Belongs to the glutathione peroxidase family
Ahae2126ch_07445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae2126ch_07460	COG1522	sequence-specific DNA binding
Ahae2126ch_07470	COG0436	Aminotransferase
Ahae2126ch_07495	COG1253	flavin adenine dinucleotide binding
Ahae2126ch_07500	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Ahae2126ch_07510	COG0012	GTP binding
Ahae2126ch_07515	COG2011	ABC-type metal ion transport system permease component
Ahae2126ch_07520	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Ahae2126ch_07525	COG1464	Belongs to the NlpA lipoprotein family
Ahae2126ch_07555	COG2195	Cleaves the N-terminal amino acid of tripeptides
Ahae2126ch_07565	COG3550	peptidyl-serine autophosphorylation
Ahae2126ch_07610	COG2363	Small membrane protein
Ahae2126ch_07630	COG0513	Belongs to the DEAD box helicase family
Ahae2126ch_07640	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Ahae2126ch_07655	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Ahae2126ch_07665	COG1192	Involved in chromosome partitioning
Ahae2126ch_07670	COG1475	DNA binding
Ahae2126ch_07675	COG0811	peptide transport
Ahae2126ch_07685	COG1132	(ABC) transporter
Ahae2126ch_07690	COG1663	tetraacyldisaccharide 4'-kinase activity
Ahae2126ch_07715	COG0084	hydrolase, TatD family'
Ahae2126ch_07780	COG0776	regulation of translation
Ahae2126ch_07795	COG2431	L-lysine efflux transmembrane transporter activity
Ahae2126ch_07810	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Ahae2126ch_07815	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
Ahae2126ch_07855	COG0024	Methionine aminopeptidase
Ahae2126ch_07860	COG0583	DNA-binding transcription factor activity
Ahae2126ch_07870	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Ahae2126ch_07875	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Ahae2126ch_07880	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Ahae2126ch_07880	COG0517	IMP dehydrogenase activity
Ahae2126ch_07905	COG0552	protein localization to endoplasmic reticulum
Ahae2126ch_07935	COG4890	Cyd operon protein YbgT
Ahae2126ch_07940	COG1294	oxidase, subunit
Ahae2126ch_07965	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Ahae2126ch_07985	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Ahae2126ch_07990	COG0569	domain protein
Ahae2126ch_07995	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Ahae2126ch_08000	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Ahae2126ch_08035	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Ahae2126ch_08040	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
Ahae2126ch_08045	COG0542	response to heat
Ahae2126ch_08055	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Ahae2126ch_08060	COG2267	carboxylic ester hydrolase activity
Ahae2126ch_08070	COG1902	pentaerythritol trinitrate reductase activity
Ahae2126ch_08070	COG0446	pyridine nucleotide-disulphide oxidoreductase
Ahae2126ch_08120	COG0148	phosphopyruvate hydratase activity
Ahae2126ch_08125	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
Ahae2126ch_08200	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Ahae2126ch_08210	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
Ahae2126ch_08225	COG1802	Transcriptional regulator
Ahae2126ch_08260	COG2207	Transcriptional regulator
Ahae2126ch_08265	COG1063	alcohol dehydrogenase
Ahae2126ch_08275	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
Ahae2126ch_08300	COG2826	transposase and inactivated derivatives, IS30 family
Ahae2126ch_08345	COG1944	ATP diphosphatase activity
Ahae2126ch_08365	COG1522	sequence-specific DNA binding
Ahae2126ch_08380	COG0439	Biotin carboxylase
Ahae2126ch_08385	COG2801	Transposase and inactivated derivatives
Ahae2126ch_08430	COG0864	Transcriptional regulator
Ahae2126ch_08435	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ahae2126ch_08445	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ahae2126ch_08450	COG1595	DNA-templated transcription, initiation
Ahae2126ch_08520	COG4770	biotin carboxylase activity
Ahae2126ch_08525	COG1024	Enoyl-CoA hydratase
Ahae2126ch_08530	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Ahae2126ch_08535	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_08540	COG1309	transcriptional regulator
Ahae2126ch_08545	COG0318	PFAM AMP-dependent synthetase and ligase
Ahae2126ch_08560	COG2814	Major facilitator Superfamily
Ahae2126ch_08580	COG0583	DNA-binding transcription factor activity
Ahae2126ch_08590	COG4774	siderophore transport
Ahae2126ch_08695	COG2249	NAD(P)H dehydrogenase (quinone) activity
Ahae2126ch_08705	COG3706	GGDEF domain
Ahae2126ch_08725	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Ahae2126ch_08745	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Ahae2126ch_08790	COG0537	adenosine 5'-monophosphoramidase activity
Ahae2126ch_08820	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Ahae2126ch_08840	COG0730	response to heat
Ahae2126ch_08845	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Ahae2126ch_08855	COG4771	TonB-dependent receptor
Ahae2126ch_08875	COG0406	alpha-ribazole phosphatase activity
Ahae2126ch_08880	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
Ahae2126ch_08895	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Ahae2126ch_08910	COG2814	Major facilitator Superfamily
Ahae2126ch_08955	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_08960	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_08965	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Ahae2126ch_08985	COG2207	Transcriptional regulator
Ahae2126ch_08990	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Ahae2126ch_09025	COG0575	Belongs to the CDS family
Ahae2126ch_09030	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Ahae2126ch_09040	COG0528	UMP kinase activity
Ahae2126ch_09050	COG3852	Histidine kinase
Ahae2126ch_09055	COG2204	response regulator
Ahae2126ch_09060	COG1309	transcriptional regulator
Ahae2126ch_09110	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
Ahae2126ch_09130	COG0697	spore germination
Ahae2126ch_09135	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Ahae2126ch_09145	COG0303	'Molybdopterin
Ahae2126ch_09150	COG0315	cyclic pyranopterin monophosphate synthase activity
Ahae2126ch_09150	COG0521	Mo-molybdopterin cofactor biosynthetic process
Ahae2126ch_09165	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Ahae2126ch_09170	COG0243	molybdopterin cofactor binding
Ahae2126ch_09185	COG0243	molybdopterin cofactor binding
Ahae2126ch_09190	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Ahae2126ch_09195	COG2146	nitrite reductase [NAD(P)H] activity
Ahae2126ch_09195	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Ahae2126ch_09200	COG2223	nitrite transmembrane transporter activity
Ahae2126ch_09210	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ahae2126ch_09210	COG1116	anion transmembrane transporter activity
Ahae2126ch_09225	COG0439	Biotin carboxylase
Ahae2126ch_09240	COG2814	Major facilitator Superfamily
Ahae2126ch_09250	COG0069	glutamate synthase activity
Ahae2126ch_09270	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Ahae2126ch_09275	COG4372	Transposase
Ahae2126ch_09290	COG3038	cytochrome b561
Ahae2126ch_09295	COG1454	alcohol dehydrogenase
Ahae2126ch_09300	COG0824	Thioesterase
Ahae2126ch_09310	COG2850	peptidyl-arginine hydroxylation
Ahae2126ch_09340	COG0640	Transcriptional regulator
Ahae2126ch_09365	COG0668	transmembrane transport
Ahae2126ch_09380	COG1132	(ABC) transporter
Ahae2126ch_09400	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Ahae2126ch_09410	COG0506	proline dehydrogenase activity
Ahae2126ch_09410	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Ahae2126ch_09410	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
Ahae2126ch_09420	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Ahae2126ch_09430	COG3698	Phosphodiester glycosidase
Ahae2126ch_09445	COG3153	acetyltransferase
Ahae2126ch_09450	COG2353	YceI-like domain
Ahae2126ch_09470	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Ahae2126ch_09475	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
Ahae2126ch_09500	COG1278	Cold shock
Ahae2126ch_09505	COG1278	Cold shock
Ahae2126ch_09525	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Ahae2126ch_09525	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Ahae2126ch_09550	COG3539	Fimbrial protein
Ahae2126ch_09605	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Ahae2126ch_09620	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_09625	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Ahae2126ch_09655	COG3139	Protein of unknown function (DUF1315)
Ahae2126ch_09660	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Ahae2126ch_09665	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Ahae2126ch_09675	COG0494	nUDIX hydrolase
Ahae2126ch_09685	COG0642	Histidine kinase
Ahae2126ch_09690	COG0745	RESPONSE REGULATOR receiver
Ahae2126ch_09700	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Ahae2126ch_09705	COG1720	tRNA m6t6A37 methyltransferase activity
Ahae2126ch_09745	COG0583	DNA-binding transcription factor activity
Ahae2126ch_09750	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Ahae2126ch_09760	COG2814	Major facilitator Superfamily
Ahae2126ch_09765	COG4607	ABC-type enterochelin transport system periplasmic component
Ahae2126ch_09770	COG4604	ABC transporter, ATP-binding protein
Ahae2126ch_09775	COG4605	iron ion homeostasis
Ahae2126ch_09780	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Ahae2126ch_09790	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Ahae2126ch_09795	COG0471	metal ion transport
Ahae2126ch_09820	COG0729	surface antigen
Ahae2126ch_09845	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
Ahae2126ch_09870	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
Ahae2126ch_09880	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Ahae2126ch_09975	COG3659	wide pore channel activity
Ahae2126ch_09985	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
Ahae2126ch_09995	COG0583	DNA-binding transcription factor activity
Ahae2126ch_10000	COG1131	(ABC) transporter
Ahae2126ch_10005	COG0842	Transport permease protein
Ahae2126ch_10020	COG0772	Belongs to the SEDS family
Ahae2126ch_10025	COG2951	lytic endotransglycosylase activity
Ahae2126ch_10050	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Ahae2126ch_10065	COG1643	Atp-dependent helicase
Ahae2126ch_10070	COG0450	alkyl hydroperoxide reductase
Ahae2126ch_10090	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Ahae2126ch_10110	COG3634	alkyl hydroperoxide reductase activity
Ahae2126ch_10130	COG0220	tRNA (guanine-N7-)-methyltransferase activity
Ahae2126ch_10145	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Ahae2126ch_10165	COG0531	amino acid
Ahae2126ch_10170	COG4303	Ethanolamine ammonia lyase large subunit
Ahae2126ch_10175	COG4302	ethanolamine ammonia-lyase activity
Ahae2126ch_10180	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Ahae2126ch_10180	COG0519	Catalyzes the synthesis of GMP from XMP
Ahae2126ch_10185	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Ahae2126ch_10195	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Ahae2126ch_10205	COG2249	NAD(P)H dehydrogenase (quinone) activity
Ahae2126ch_10215	COG0697	spore germination
Ahae2126ch_10220	COG1923	regulation of RNA biosynthetic process
Ahae2126ch_10230	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Ahae2126ch_10235	COG0802	atpase or kinase
Ahae2126ch_10265	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Ahae2126ch_10270	COG3300	MHYT domain
Ahae2126ch_10270	COG5001	Diguanylate cyclase
Ahae2126ch_10290	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Ahae2126ch_10295	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Ahae2126ch_10300	COG1845	cytochrome c oxidase, subunit III
Ahae2126ch_10305	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
Ahae2126ch_10330	COG2249	NAD(P)H dehydrogenase (quinone) activity
Ahae2126ch_10335	COG1733	regulation of RNA biosynthetic process
Ahae2126ch_10340	COG0305	Participates in initiation and elongation during chromosome replication
Ahae2126ch_10345	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Ahae2126ch_10360	COG1305	Transglutaminase-like
Ahae2126ch_10370	COG2308	Evidence 4 Homologs of previously reported genes of
Ahae2126ch_10385	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Ahae2126ch_10405	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Ahae2126ch_10415	COG0527	aspartate kinase activity
Ahae2126ch_10425	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Ahae2126ch_10435	COG3038	cytochrome b561
Ahae2126ch_10440	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
Ahae2126ch_10445	COG2252	PERMEase
Ahae2126ch_10525	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
Ahae2126ch_10530	COG0138	bifunctional purine biosynthesis protein purh
Ahae2126ch_10535	COG0151	Belongs to the GarS family
Ahae2126ch_10540	COG1464	Belongs to the NlpA lipoprotein family
Ahae2126ch_10545	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
Ahae2126ch_10550	COG2011	ABC-type metal ion transport system permease component
Ahae2126ch_10575	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Ahae2126ch_10580	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Ahae2126ch_10585	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Ahae2126ch_10620	COG0052	Belongs to the universal ribosomal protein uS2 family
Ahae2126ch_10625	COG0024	Methionine aminopeptidase
Ahae2126ch_10635	COG2223	nitrite transmembrane transporter activity
Ahae2126ch_10650	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Ahae2126ch_10655	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
Ahae2126ch_10660	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Ahae2126ch_10665	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Ahae2126ch_10700	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Ahae2126ch_10705	COG3161	chorismate lyase activity
Ahae2126ch_10710	COG0174	glutamine synthetase
Ahae2126ch_10715	COG0512	Glutamine amidotransferase of anthranilate synthase
Ahae2126ch_10740	COG3217	Mosc domain protein beta barrel domain protein
Ahae2126ch_10740	COG0633	Ferredoxin
Ahae2126ch_10755	COG2963	transposase activity
Ahae2126ch_10765	COG4372	Transposase
Ahae2126ch_10805	COG0302	gtp cyclohydrolase
Ahae2126ch_10840	COG3739	integral membrane protein
Ahae2126ch_10875	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Ahae2126ch_10890	COG4172	Belongs to the ABC transporter superfamily
Ahae2126ch_10895	COG4239	(ABC) transporter, permease
Ahae2126ch_10900	COG4174	ABC transporter (Permease)
Ahae2126ch_10905	COG4166	transmembrane transport
Ahae2126ch_10910	COG1388	LysM domain
Ahae2126ch_10910	COG0741	lytic transglycosylase activity
Ahae2126ch_10910	COG1388	LysM domain
Ahae2126ch_10910	COG0741	lytic transglycosylase activity
Ahae2126ch_10915	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Ahae2126ch_10925	COG2816	NAD+ diphosphatase activity
Ahae2126ch_10955	COG0583	DNA-binding transcription factor activity
Ahae2126ch_10960	COG1279	arginine transmembrane transporter activity
Ahae2126ch_10970	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Ahae2126ch_10975	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Ahae2126ch_10980	COG0006	proline dipeptidase activity
Ahae2126ch_11010	COG2217	Heavy metal translocating P-type atpase
Ahae2126ch_11025	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Ahae2126ch_11040	COG3384	dioxygenase
Ahae2126ch_11065	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Ahae2126ch_11110	COG3501	Rhs element vgr protein
Ahae2126ch_11115	COG2878	Part of a membrane complex involved in electron transport
Ahae2126ch_11120	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Ahae2126ch_11145	COG0768	penicillin binding
Ahae2126ch_11150	COG0742	ribosomal rna small subunit methyltransferase
Ahae2126ch_11180	COG0616	signal peptide processing
Ahae2126ch_11185	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Ahae2126ch_11195	COG0573	inorganic phosphate transmembrane transporter activity
Ahae2126ch_11225	COG0076	glutamate decarboxylase activity
Ahae2126ch_11230	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Ahae2126ch_11240	COG1309	transcriptional regulator
Ahae2126ch_11270	COG0783	Belongs to the Dps family
Ahae2126ch_11280	COG0564	pseudouridine synthase activity
Ahae2126ch_11295	COG0352	thiamine-phosphate diphosphorylase activity
Ahae2126ch_11325	COG0612	Peptidase, M16
Ahae2126ch_11330	COG0384	phenazine biosynthesis protein PhzF
Ahae2126ch_11385	COG1686	Belongs to the peptidase S11 family
Ahae2126ch_11390	COG1252	NADH dehydrogenase
Ahae2126ch_11400	COG0415	Belongs to the DNA photolyase family
Ahae2126ch_11415	COG1215	transferase activity, transferring glycosyl groups
Ahae2126ch_11440	COG1271	oxidase subunit
Ahae2126ch_11445	COG1294	oxidase, subunit
Ahae2126ch_11465	COG0705	Rhomboid family
Ahae2126ch_11465	COG0457	Tetratricopeptide repeat
Ahae2126ch_11475	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
Ahae2126ch_11480	COG4181	ATPase activity
Ahae2126ch_11490	COG0456	acetyltransferase
Ahae2126ch_11510	COG4771	TonB-dependent receptor
Ahae2126ch_11530	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
Ahae2126ch_11600	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Ahae2126ch_11605	COG1597	lipid kinase activity
Ahae2126ch_11610	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
Ahae2126ch_11640	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Ahae2126ch_11650	COG2388	GCN5-related N-acetyl-transferase
Ahae2126ch_11695	COG4681	YaeQ
Ahae2126ch_11700	COG0523	cobalamin synthesis protein
Ahae2126ch_11715	COG1607	acyl-coa hydrolase
Ahae2126ch_11735	COG2814	Major facilitator Superfamily
Ahae2126ch_11740	COG1024	Enoyl-CoA hydratase
Ahae2126ch_11745	COG1012	belongs to the aldehyde dehydrogenase family
Ahae2126ch_11755	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_11795	COG1414	Transcriptional regulator
Ahae2126ch_11800	COG0281	malic enzyme
Ahae2126ch_11805	COG0833	amino acid
Ahae2126ch_11820	COG1012	belongs to the aldehyde dehydrogenase family
Ahae2126ch_11830	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Ahae2126ch_11835	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Ahae2126ch_11845	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_11850	COG1454	alcohol dehydrogenase
Ahae2126ch_11855	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
Ahae2126ch_11860	COG2826	transposase and inactivated derivatives, IS30 family
Ahae2126ch_11885	COG0625	glutathione transferase activity
Ahae2126ch_11915	COG0446	pyridine nucleotide-disulphide oxidoreductase
Ahae2126ch_11915	COG1902	pentaerythritol trinitrate reductase activity
Ahae2126ch_11925	COG4689	acetoacetate decarboxylase
Ahae2126ch_11930	COG4221	oxidoreductase activity
Ahae2126ch_11945	COG2814	Major facilitator Superfamily
Ahae2126ch_11950	COG1566	PFAM secretion protein HlyD family protein
Ahae2126ch_11955	COG2050	protein possibly involved in aromatic compounds catabolism
Ahae2126ch_11965	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Ahae2126ch_11970	COG1090	epimerase
Ahae2126ch_11990	COG0420	3'-5' exonuclease activity
Ahae2126ch_12040	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Ahae2126ch_12045	COG2914	Belongs to the UPF0125 (RnfH) family
Ahae2126ch_12060	COG0121	glutamine amidotransferase
Ahae2126ch_12075	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Ahae2126ch_12080	COG0756	dUTP diphosphatase activity
Ahae2126ch_12085	COG0210	DNA helicase
Ahae2126ch_12090	COG2885	chlorophyll binding
Ahae2126ch_12095	COG0204	Acyl-transferase
Ahae2126ch_12105	COG0850	regulation of cytokinetic process
Ahae2126ch_12110	COG2894	cell division
Ahae2126ch_12115	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
Ahae2126ch_12125	COG1280	lysine exporter protein (LysE YggA)
Ahae2126ch_12130	COG0531	amino acid
Ahae2126ch_12130	COG1674	ftsk spoiiie
Ahae2126ch_12135	COG0492	ferredoxin-NADP+ reductase activity
Ahae2126ch_12140	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
Ahae2126ch_12150	COG0456	acetyltransferase
Ahae2126ch_12165	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Ahae2126ch_12175	COG0049	tRNA binding
Ahae2126ch_12210	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Ahae2126ch_12210	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Ahae2126ch_12235	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Ahae2126ch_12245	COG0582	viral genome integration into host DNA
Ahae2126ch_12260	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Ahae2126ch_12325	COG2132	Multicopper oxidase
Ahae2126ch_12340	COG2205	protein histidine kinase activity
Ahae2126ch_12345	COG2217	Heavy metal translocating P-type atpase
Ahae2126ch_12475	COG0564	pseudouridine synthase activity
Ahae2126ch_12485	COG0358	DNA primase activity
Ahae2126ch_12500	COG2826	transposase and inactivated derivatives, IS30 family
Ahae2126ch_12530	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
Ahae2126ch_12545	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Ahae2126ch_12580	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Ahae2126ch_12590	COG0351	phosphomethylpyrimidine kinase
Ahae2126ch_12590	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
Ahae2126ch_12590	COG0352	thiamine-phosphate diphosphorylase activity
Ahae2126ch_12600	COG1652	LysM domain
Ahae2126ch_12625	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Ahae2126ch_12630	COG1399	metal-binding, possibly nucleic acid-binding protein
Ahae2126ch_12635	COG3101	peptidyl-lysine hydroxylation
Ahae2126ch_12640	COG0009	L-threonylcarbamoyladenylate synthase
Ahae2126ch_12660	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
Ahae2126ch_12665	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Ahae2126ch_12695	COG0747	negative chemotaxis
Ahae2126ch_12745	COG4106	trans-aconitate 2-methyltransferase activity
Ahae2126ch_12765	COG0596	Alpha beta hydrolase
Ahae2126ch_12765	COG2226	methyltransferase
Ahae2126ch_12765	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Ahae2126ch_12775	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Ahae2126ch_12790	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Ahae2126ch_12800	COG1196	nuclear chromosome segregation
Ahae2126ch_12810	COG0730	response to heat
Ahae2126ch_12835	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Ahae2126ch_12885	COG2358	TRAP transporter, solute receptor (TAXI family
Ahae2126ch_12905	COG0489	protein tyrosine kinase activity
Ahae2126ch_12925	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Ahae2126ch_12925	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Ahae2126ch_12955	COG2515	1-aminocyclopropane-1-carboxylate deaminase
Ahae2126ch_12960	COG2081	HI0933 family
Ahae2126ch_12965	COG0668	transmembrane transport
Ahae2126ch_12980	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Ahae2126ch_12985	COG0583	DNA-binding transcription factor activity
Ahae2126ch_13020	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Ahae2126ch_13025	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Ahae2126ch_13040	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Ahae2126ch_13055	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
Ahae2126ch_13065	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Ahae2126ch_13065	COG0649	NAD binding
Ahae2126ch_13075	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Ahae2126ch_13105	COG2205	protein histidine kinase activity
Ahae2126ch_13110	COG0745	RESPONSE REGULATOR receiver
Ahae2126ch_13125	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Ahae2126ch_13170	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Ahae2126ch_13175	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Ahae2126ch_13180	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Ahae2126ch_13185	COG2076	Multidrug Resistance protein
Ahae2126ch_13215	COG2132	Multicopper oxidase
Ahae2126ch_13225	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Ahae2126ch_13250	COG1968	undecaprenyl-diphosphatase activity
Ahae2126ch_13255	COG1214	PFAM Peptidase M22, glycoprotease
Ahae2126ch_13265	COG0494	nUDIX hydrolase
Ahae2126ch_13305	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Ahae2126ch_13315	COG1595	DNA-templated transcription, initiation
Ahae2126ch_13320	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Ahae2126ch_13325	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Ahae2126ch_13390	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Ahae2126ch_13400	COG1764	response to oxidative stress
Ahae2126ch_13425	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Ahae2126ch_13425	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Ahae2126ch_13440	COG0037	tRNA processing
Ahae2126ch_13450	COG0248	Ppx GppA phosphatase
Ahae2126ch_13475	COG0072	phenylalanine-tRNA ligase activity
Ahae2126ch_13505	COG1238	metal cluster binding
Ahae2126ch_13520	COG0625	glutathione transferase activity
Ahae2126ch_13540	COG0318	PFAM AMP-dependent synthetase and ligase
Ahae2126ch_13545	COG3028	Belongs to the UPF0307 family
Ahae2126ch_13570	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Ahae2126ch_13575	COG0617	tRNA 3'-terminal CCA addition
Ahae2126ch_13580	COG1555	photosystem II stabilization
Ahae2126ch_13585	COG3956	TIGRFAM MazG family protein
Ahae2126ch_13600	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Ahae2126ch_13620	COG5002	protein histidine kinase activity
Ahae2126ch_13620	COG0784	Response regulator, receiver
Ahae2126ch_13620	COG2205	protein histidine kinase activity
Ahae2126ch_13630	COG2084	Dehydrogenase
Ahae2126ch_13635	COG3622	Belongs to the hyi family
Ahae2126ch_13680	COG2814	Major facilitator Superfamily
Ahae2126ch_13685	COG5285	phytanoyl-CoA dioxygenase
Ahae2126ch_13690	COG1917	Cupin 2, conserved barrel domain protein
Ahae2126ch_13700	COG0456	acetyltransferase
Ahae2126ch_13710	COG0431	NADPH-dependent FMN reductase
Ahae2126ch_13715	COG0798	PFAM Bile acid sodium symporter
Ahae2126ch_13725	COG0640	Transcriptional regulator
Ahae2126ch_13760	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
Ahae2126ch_13770	COG2826	transposase and inactivated derivatives, IS30 family
Ahae2126ch_13810	COG3152	Membrane
Ahae2126ch_13885	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Ahae2126ch_13895	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Ahae2126ch_13910	COG0084	hydrolase, TatD family'
Ahae2126ch_13925	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
Ahae2126ch_13930	COG3177	Filamentation induced by cAMP protein fic
Ahae2126ch_13935	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
Ahae2126ch_14060	COG4372	Transposase
Ahae2126ch_14125	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Ahae2126ch_14130	COG0440	acetolactate synthase activity
Ahae2126ch_14135	COG0028	Belongs to the TPP enzyme family
Ahae2126ch_14155	COG1466	dna polymerase III delta subunit
Ahae2126ch_14160	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae2126ch_14165	COG0577	efflux transmembrane transporter activity
Ahae2126ch_14165	COG1136	(ABC) transporter
Ahae2126ch_14170	COG1538	Outer membrane efflux protein
Ahae2126ch_14195	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
Ahae2126ch_14200	COG1162	GTPase activity
Ahae2126ch_14210	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
Ahae2126ch_14245	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Ahae2126ch_14255	COG3781	membrane
Ahae2126ch_14290	COG1666	GTP binding
Ahae2126ch_14305	COG1956	GAF domain-containing protein
Ahae2126ch_14310	COG1607	acyl-coa hydrolase
Ahae2126ch_14365	COG1183	phosphatidylcholine synthase activity
Ahae2126ch_14370	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
Ahae2126ch_14400	COG0741	lytic transglycosylase activity
Ahae2126ch_14400	COG0739	heme binding
Ahae2126ch_14400	COG1196	nuclear chromosome segregation
Ahae2126ch_14410	COG1702	phosphate starvation-inducible protein PhoH
Ahae2126ch_14425	COG4773	Receptor
Ahae2126ch_14490	COG0788	formyltetrahydrofolate deformylase activity
Ahae2126ch_14515	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Ahae2126ch_14515	COG4651	solute:proton antiporter activity
Ahae2126ch_14540	COG0210	DNA helicase
Ahae2126ch_14565	COG1733	regulation of RNA biosynthetic process
Ahae2126ch_14575	COG2900	Belongs to the SlyX family
Ahae2126ch_14590	COG1560	Kdo2-lipid A biosynthetic process
Ahae2126ch_14640	COG0473	3-isopropylmalate dehydrogenase activity
Ahae2126ch_14675	COG0494	nUDIX hydrolase
Ahae2126ch_14710	COG0625	glutathione transferase activity
Ahae2126ch_14725	COG0564	pseudouridine synthase activity
Ahae2126ch_14735	COG1530	ribonuclease E activity
Ahae2126ch_14740	COG0318	PFAM AMP-dependent synthetase and ligase
Ahae2126ch_14755	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Ahae2126ch_14765	COG0534	Mate efflux family protein
Ahae2126ch_14770	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
Ahae2126ch_14795	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Ahae2126ch_14820	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
Ahae2126ch_14860	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Ahae2126ch_14875	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Ahae2126ch_14885	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
Ahae2126ch_14885	COG0644	oxidoreductase
Ahae2126ch_14890	COG0425	Belongs to the sulfur carrier protein TusA family
Ahae2126ch_14895	COG4535	Mg2 and Co2 transporter CorC
Ahae2126ch_14900	COG0815	Transfers the fatty acyl group on membrane lipoproteins
Ahae2126ch_14920	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Ahae2126ch_14930	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
Ahae2126ch_14950	COG0789	Transcriptional regulator
Ahae2126ch_14955	COG0598	Magnesium transport protein CorA
Ahae2126ch_14960	COG1185	polyribonucleotide nucleotidyltransferase activity
Ahae2126ch_14965	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Ahae2126ch_14975	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Ahae2126ch_14980	COG1074	ATP-dependent DNA helicase activity
Ahae2126ch_14985	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
Ahae2126ch_15010	COG2226	methyltransferase
Ahae2126ch_15035	COG1116	anion transmembrane transporter activity
Ahae2126ch_15040	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Ahae2126ch_15050	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Ahae2126ch_15065	COG2111	Na H antiporter
Ahae2126ch_15065	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Ahae2126ch_15070	COG1006	Multisubunit Na H antiporter MnhC subunit
Ahae2126ch_15075	COG0651	ATP synthesis coupled electron transport
Ahae2126ch_15080	COG1863	multisubunit Na H antiporter MnhE subunit
Ahae2126ch_15085	COG2212	antiporter activity
Ahae2126ch_15120	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Ahae2126ch_15130	COG0195	Participates in both transcription termination and antitermination
Ahae2126ch_15180	COG0237	dephospho-CoA kinase activity
Ahae2126ch_15195	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Ahae2126ch_15205	COG0497	DNA recombination
Ahae2126ch_15215	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Ahae2126ch_15240	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Ahae2126ch_15290	COG1132	(ABC) transporter
Ahae2126ch_15300	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
Ahae2126ch_15315	COG0326	Molecular chaperone. Has ATPase activity
Ahae2126ch_15325	COG2056	Na+-H+ antiporter family
Ahae2126ch_15375	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Ahae2126ch_15385	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Ahae2126ch_15395	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Ahae2126ch_15425	COG0546	phosphoglycolate phosphatase activity
Ahae2126ch_15430	COG1716	ATPase activity
Ahae2126ch_15485	COG0181	hydroxymethylbilane synthase activity
Ahae2126ch_15495	COG3275	phosphorelay sensor kinase activity
Ahae2126ch_15525	COG0494	nUDIX hydrolase
Ahae2126ch_15535	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Ahae2126ch_15540	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Ahae2126ch_15545	COG0772	Belongs to the SEDS family
Ahae2126ch_15570	COG4974	Belongs to the 'phage' integrase family
Ahae2126ch_15575	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Ahae2126ch_15585	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Ahae2126ch_15590	COG1686	Belongs to the peptidase S11 family
Ahae2126ch_15595	COG2197	response regulator
Ahae2126ch_15610	COG0793	Belongs to the peptidase S41A family
Ahae2126ch_15615	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Ahae2126ch_15620	COG0795	lipopolysaccharide-transporting ATPase activity
Ahae2126ch_15625	COG0795	lipopolysaccharide-transporting ATPase activity
Ahae2126ch_15660	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Ahae2126ch_15660	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Ahae2126ch_15665	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Ahae2126ch_15670	COG0004	ammonium transporteR
Ahae2126ch_15675	COG0347	Belongs to the P(II) protein family
Ahae2126ch_15755	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae2126ch_15760	COG1230	cation diffusion facilitator family transporter
Ahae2126ch_15770	COG2963	transposase activity
Ahae2126ch_15780	COG4372	Transposase
Ahae2126ch_15785	COG0640	Transcriptional regulator
Ahae2126ch_15795	COG0789	Transcriptional regulator
Ahae2126ch_15825	COG2814	Major facilitator Superfamily
Ahae2126ch_15865	COG0633	Ferredoxin
Ahae2126ch_15910	COG0606	chelatase, subunit chli
Ahae2126ch_15945	COG0318	PFAM AMP-dependent synthetase and ligase
Ahae2126ch_15960	COG2860	membrane
Ahae2126ch_15970	COG1253	flavin adenine dinucleotide binding
Ahae2126ch_15990	COG2814	Major facilitator Superfamily
Ahae2126ch_16000	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Ahae2126ch_16025	COG2814	Major facilitator Superfamily
Ahae2126ch_16035	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Ahae2126ch_16040	COG1283	sodium-dependent phosphate transmembrane transporter activity
Ahae2126ch_16070	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Ahae2126ch_16085	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Ahae2126ch_16090	COG3162	membrane
Ahae2126ch_16095	COG2205	protein histidine kinase activity
Ahae2126ch_16120	COG1652	LysM domain
Ahae2126ch_16125	COG0758	DNA mediated transformation
Ahae2126ch_16140	COG1309	transcriptional regulator
Ahae2126ch_16150	COG2814	Major facilitator Superfamily
Ahae2126ch_16160	COG0386	Belongs to the glutathione peroxidase family
Ahae2126ch_16175	COG3328	transposase activity
Ahae2126ch_16190	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Ahae2126ch_16200	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Ahae2126ch_16240	COG1121	(ABC) transporter
Ahae2126ch_16245	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Ahae2126ch_16250	COG1280	lysine exporter protein (LysE YggA)
Ahae2126ch_16255	COG2837	iron assimilation
Ahae2126ch_16290	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Ahae2126ch_16310	COG0519	Catalyzes the synthesis of GMP from XMP
Ahae2126ch_16310	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Ahae2126ch_16315	COG4399	Belongs to the UPF0754 family
Ahae2126ch_16325	COG2259	Doxx family
Ahae2126ch_16330	COG0586	Pfam SNARE associated Golgi protein
Ahae2126ch_16345	COG1192	Involved in chromosome partitioning
Ahae2126ch_16355	COG0271	Belongs to the BolA IbaG family
Ahae2126ch_16390	COG3756	Protein conserved in bacteria
Ahae2126ch_16420	COG1283	sodium-dependent phosphate transmembrane transporter activity
Ahae2126ch_16425	COG0842	Transport permease protein
Ahae2126ch_16430	COG1129	ABC transporter
Ahae2126ch_16430	COG0842	Transport permease protein
Ahae2126ch_16435	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Ahae2126ch_16450	COG2826	transposase and inactivated derivatives, IS30 family
Ahae2126ch_16495	COG3550	peptidyl-serine autophosphorylation
Ahae2126ch_16500	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Ahae2126ch_16565	COG0735	belongs to the Fur family
Ahae2126ch_16580	COG2826	transposase and inactivated derivatives, IS30 family
Ahae2126ch_16635	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Ahae2126ch_16645	COG4115	mRNA cleavage
Ahae2126ch_16675	COG0477	Major facilitator Superfamily
Ahae2126ch_16680	COG1024	Enoyl-CoA hydratase
Ahae2126ch_16685	COG1024	Enoyl-CoA hydratase
Ahae2126ch_16690	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_16695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Ahae2126ch_16715	COG1113	amino acid transport
Ahae2126ch_16720	COG0251	oxidation-reduction process
Ahae2126ch_16750	COG0456	acetyltransferase
Ahae2126ch_16785	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
Ahae2126ch_16805	COG1802	Transcriptional regulator
Ahae2126ch_16820	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Ahae2126ch_16825	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Ahae2126ch_16840	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Ahae2126ch_16850	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Ahae2126ch_16860	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Ahae2126ch_16865	COG0438	transferase activity, transferring glycosyl groups
Ahae2126ch_16870	COG1215	transferase activity, transferring glycosyl groups
Ahae2126ch_16880	COG0438	transferase activity, transferring glycosyl groups
Ahae2126ch_16900	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
Ahae2126ch_16905	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
Ahae2126ch_16940	COG3023	N-Acetylmuramoyl-L-alanine amidase
Ahae2126ch_16990	COG0546	phosphoglycolate phosphatase activity
Ahae2126ch_16995	COG1028	Short-chain dehydrogenase reductase Sdr
Ahae2126ch_17005	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Ahae2126ch_17005	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
Ahae2126ch_17010	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ahae2126ch_17015	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Ahae2126ch_17020	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Ahae2126ch_17025	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Ahae2126ch_17030	COG1116	anion transmembrane transporter activity
Ahae2126ch_17035	COG1309	transcriptional regulator
Ahae2126ch_17045	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Ahae2126ch_17055	COG0196	riboflavin kinase activity
Ahae2126ch_17060	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Ahae2126ch_17070	COG1047	Peptidyl-prolyl cis-trans
Ahae2126ch_17110	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Ahae2126ch_17135	COG0583	DNA-binding transcription factor activity
Ahae2126ch_17145	COG0443	Heat shock 70 kDa protein
Ahae2126ch_17150	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
Ahae2126ch_17175	COG2951	lytic endotransglycosylase activity
Ahae2126ch_17185	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Ahae2126ch_17205	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Ahae2126ch_17225	COG1960	acyl-CoA dehydrogenase activity
Ahae2126ch_17235	COG0861	Integral membrane protein TerC family
Ahae2126ch_17240	COG0402	S-adenosylhomocysteine deaminase activity
Ahae2126ch_17255	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Ahae2126ch_17265	COG0706	membrane insertase activity
Ahae2126ch_17315	COG2184	nucleotidyltransferase activity
Ahae2126ch_17355	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Ahae2126ch_17405	COG2369	cell adhesion
Ahae2126ch_17410	COG0582	viral genome integration into host DNA
Ahae2126ch_17435	COG1373	ATPase (AAA superfamily
Ahae2126ch_17545	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
Ahae2126ch_17585	COG0583	DNA-binding transcription factor activity
Ahae2126ch_17590	COG1028	Short-chain dehydrogenase reductase Sdr
Ahae2126ch_17595	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Ahae2126ch_17610	COG1064	alcohol dehydrogenase
Ahae2126ch_17660	COG0583	DNA-binding transcription factor activity
Ahae2126ch_17685	COG0154	amidase activity
Ahae2126ch_17815	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
Ahae2126ch_17860	COG2015	COG2015, Alkyl sulfatase and related hydrolases