locus-tag class description AhaeAN54_000010 PF17760 UvrA interaction domain AhaeAN54_000010 PF17755 UvrA DNA-binding domain AhaeAN54_000030 PF13737 Transposase DDE domain AhaeAN54_000060 PF13657 HipA N-terminal domain AhaeAN54_000060 PF07804 HipA-like C-terminal domain AhaeAN54_000065 PF00176 SNF2 family N-terminal domain AhaeAN54_000065 PF12419 SNF2 Helicase protein AhaeAN54_000065 PF00271 Helicase conserved C-terminal domain AhaeAN54_000080 PF13737 Transposase DDE domain AhaeAN54_000135 PF13737 Transposase DDE domain AhaeAN54_000140 PF04411 PD-(D/E)XK nuclease superfamily AhaeAN54_000150 PF13737 Transposase DDE domain AhaeAN54_000175 PF02678 Pirin AhaeAN54_000175 PF05726 Pirin C-terminal cupin domain AhaeAN54_000185 PF01475 Ferric uptake regulator family AhaeAN54_000190 PF03551 Transcriptional regulator PadR-like family AhaeAN54_000245 PF00271 Helicase conserved C-terminal domain AhaeAN54_000245 PF00176 SNF2 family N-terminal domain AhaeAN54_000245 PF12419 SNF2 Helicase protein AhaeAN54_000255 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AhaeAN54_000275 PF00083 Sugar (and other) transporter AhaeAN54_000275 PF07690 Major Facilitator Superfamily AhaeAN54_000280 PF00378 Enoyl-CoA hydratase/isomerase AhaeAN54_000285 PF00378 Enoyl-CoA hydratase/isomerase AhaeAN54_000290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_000290 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_000290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_000295 PF13193 AMP-binding enzyme C-terminal domain AhaeAN54_000295 PF00501 AMP-binding enzyme AhaeAN54_000300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AhaeAN54_000300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AhaeAN54_000305 PF00171 Aldehyde dehydrogenase family AhaeAN54_000315 PF00324 Amino acid permease AhaeAN54_000320 PF01042 Endoribonuclease L-PSP AhaeAN54_000325 PF00842 Alanine racemase, C-terminal domain AhaeAN54_000325 PF01168 Alanine racemase, N-terminal domain AhaeAN54_000330 PF01266 FAD dependent oxidoreductase AhaeAN54_000335 PF01037 Lrp/AsnC ligand binding domain AhaeAN54_000340 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_000340 PF00593 TonB dependent receptor AhaeAN54_000350 PF00583 Acetyltransferase (GNAT) family AhaeAN54_000355 PF00849 RNA pseudouridylate synthase AhaeAN54_000360 PF01113 Dihydrodipicolinate reductase, N-terminus AhaeAN54_000360 PF05173 Dihydrodipicolinate reductase, C-terminus AhaeAN54_000385 PF13737 Transposase DDE domain AhaeAN54_000390 PF00330 Aconitase family (aconitate hydratase) AhaeAN54_000390 PF00694 Aconitase C-terminal domain AhaeAN54_000395 PF00285 Citrate synthase, C-terminal domain AhaeAN54_000410 PF00392 Bacterial regulatory proteins, gntR family AhaeAN54_000410 PF07729 FCD domain AhaeAN54_000415 PF00155 Aminotransferase class I and II AhaeAN54_000420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AhaeAN54_000420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AhaeAN54_000420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AhaeAN54_000420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AhaeAN54_000425 PF16363 GDP-mannose 4,6 dehydratase AhaeAN54_000430 PF00342 Phosphoglucose isomerase AhaeAN54_000435 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AhaeAN54_000435 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AhaeAN54_000435 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AhaeAN54_000440 PF00483 Nucleotidyl transferase AhaeAN54_000445 PF02719 Polysaccharide biosynthesis protein AhaeAN54_000450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AhaeAN54_000455 PF00132 Bacterial transferase hexapeptide (six repeats) AhaeAN54_000455 PF14602 Hexapeptide repeat of succinyl-transferase AhaeAN54_000455 PF17836 PglD N-terminal domain AhaeAN54_000460 PF02397 Bacterial sugar transferase AhaeAN54_000470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AhaeAN54_000470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AhaeAN54_000470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AhaeAN54_000485 PF00535 Glycosyl transferase family 2 AhaeAN54_000490 PF04230 Polysaccharide pyruvyl transferase AhaeAN54_000500 PF02350 UDP-N-acetylglucosamine 2-epimerase AhaeAN54_000505 PF02563 Polysaccharide biosynthesis/export protein AhaeAN54_000505 PF10531 SLBB domain AhaeAN54_000505 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AhaeAN54_000510 PF01451 Low molecular weight phosphotyrosine protein phosphatase AhaeAN54_000515 PF13614 AAA domain AhaeAN54_000515 PF13807 G-rich domain on putative tyrosine kinase AhaeAN54_000515 PF02706 Chain length determinant protein AhaeAN54_000520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhaeAN54_000520 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AhaeAN54_000525 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AhaeAN54_000525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhaeAN54_000530 PF03023 Lipid II flippase MurJ AhaeAN54_000535 PF01510 N-acetylmuramoyl-L-alanine amidase AhaeAN54_000540 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AhaeAN54_000540 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AhaeAN54_000550 PF01138 3' exoribonuclease family, domain 1 AhaeAN54_000550 PF03725 3' exoribonuclease family, domain 2 AhaeAN54_000555 PF00487 Fatty acid desaturase AhaeAN54_000560 PF00175 Oxidoreductase NAD-binding domain AhaeAN54_000565 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_000570 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_000570 PF08360 QacR-like protein, C-terminal region AhaeAN54_000575 PF01323 DSBA-like thioredoxin domain AhaeAN54_000585 PF13419 Haloacid dehalogenase-like hydrolase AhaeAN54_000590 PF00106 short chain dehydrogenase AhaeAN54_000600 PF00696 Amino acid kinase family AhaeAN54_000600 PF00583 Acetyltransferase (GNAT) family AhaeAN54_000605 PF09084 NMT1/THI5 like AhaeAN54_000610 PF09084 NMT1/THI5 like AhaeAN54_000615 PF00296 Luciferase-like monooxygenase AhaeAN54_000620 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_000625 PF00005 ABC transporter AhaeAN54_000630 PF08362 YcdC-like protein, C-terminal region AhaeAN54_000630 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_000640 PF01048 Phosphorylase superfamily AhaeAN54_000650 PF01687 Riboflavin kinase AhaeAN54_000650 PF06574 FAD synthetase AhaeAN54_000655 PF08264 Anticodon-binding domain of tRNA AhaeAN54_000655 PF00133 tRNA synthetases class I (I, L, M and V) AhaeAN54_000655 PF06827 Zinc finger found in FPG and IleRS AhaeAN54_000660 PF01252 Signal peptidase (SPase) II AhaeAN54_000665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhaeAN54_000705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AhaeAN54_000710 PF07859 alpha/beta hydrolase fold AhaeAN54_000730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_000730 PF03466 LysR substrate binding domain AhaeAN54_000735 PF01025 GrpE AhaeAN54_000740 PF00012 Hsp70 protein AhaeAN54_000745 PF12706 Beta-lactamase superfamily domain AhaeAN54_000770 PF13406 Transglycosylase SLT domain AhaeAN54_000775 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AhaeAN54_000775 PF02222 ATP-grasp domain AhaeAN54_000780 PF00731 AIR carboxylase AhaeAN54_000795 PF08245 Mur ligase middle domain AhaeAN54_000795 PF01225 Mur ligase family, catalytic domain AhaeAN54_000795 PF02875 Mur ligase family, glutamate ligase domain AhaeAN54_000800 PF00106 short chain dehydrogenase AhaeAN54_000815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_000815 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_000815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_000820 PF03466 LysR substrate binding domain AhaeAN54_000820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_000825 PF03741 Integral membrane protein TerC family AhaeAN54_000850 PF01979 Amidohydrolase family AhaeAN54_000855 PF00156 Phosphoribosyl transferase domain AhaeAN54_000865 PF10411 Disulfide bond isomerase protein N-terminus AhaeAN54_000865 PF13098 Thioredoxin-like domain AhaeAN54_000870 PF01926 50S ribosome-binding GTPase AhaeAN54_000870 PF12631 MnmE helical domain AhaeAN54_000870 PF10396 GTP-binding protein TrmE N-terminus AhaeAN54_000875 PF14849 YidC periplasmic domain AhaeAN54_000875 PF02096 60Kd inner membrane protein AhaeAN54_000880 PF01809 Putative membrane protein insertion efficiency factor AhaeAN54_000885 PF00825 Ribonuclease P AhaeAN54_000890 PF00468 Ribosomal protein L34 AhaeAN54_000895 PF08299 Bacterial dnaA protein helix-turn-helix AhaeAN54_000895 PF11638 DnaA N-terminal domain AhaeAN54_000895 PF00308 Bacterial dnaA protein AhaeAN54_000900 PF00712 DNA polymerase III beta subunit, N-terminal domain AhaeAN54_000900 PF02767 DNA polymerase III beta subunit, central domain AhaeAN54_000900 PF02768 DNA polymerase III beta subunit, C-terminal domain AhaeAN54_000905 PF02463 RecF/RecN/SMC N terminal domain AhaeAN54_000910 PF18053 DNA gyrase B subunit insert domain AhaeAN54_000910 PF00204 DNA gyrase B AhaeAN54_000910 PF00986 DNA gyrase B subunit, carboxyl terminus AhaeAN54_000910 PF01751 Toprim domain AhaeAN54_000910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_000915 PF09335 SNARE associated Golgi protein AhaeAN54_000920 PF12848 ABC transporter AhaeAN54_000920 PF00005 ABC transporter AhaeAN54_000940 PF01521 Iron-sulphur cluster biosynthesis AhaeAN54_000945 PF03702 Anhydro-N-acetylmuramic acid kinase AhaeAN54_000950 PF00579 tRNA synthetases class I (W and Y) AhaeAN54_000990 PF03600 Citrate transporter AhaeAN54_000990 PF02080 TrkA-C domain AhaeAN54_001000 PF00171 Aldehyde dehydrogenase family AhaeAN54_001020 PF03050 Transposase IS66 family AhaeAN54_001020 PF13007 Transposase C of IS166 homeodomain AhaeAN54_001020 PF13005 zinc-finger binding domain of transposase IS66 AhaeAN54_001020 PF13817 IS66 C-terminal element AhaeAN54_001035 PF00209 Sodium:neurotransmitter symporter family AhaeAN54_001045 PF01029 NusB family AhaeAN54_001045 PF01189 16S rRNA methyltransferase RsmB/F AhaeAN54_001050 PF00551 Formyl transferase AhaeAN54_001050 PF02911 Formyl transferase, C-terminal domain AhaeAN54_001055 PF00920 Dehydratase family AhaeAN54_001070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_001070 PF03466 LysR substrate binding domain AhaeAN54_001075 PF00860 Permease family AhaeAN54_001080 PF00311 Phosphoenolpyruvate carboxylase AhaeAN54_001090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_001095 PF00873 AcrB/AcrD/AcrF family AhaeAN54_001105 PF00684 DnaJ central domain AhaeAN54_001105 PF01556 DnaJ C terminal domain AhaeAN54_001105 PF00226 DnaJ domain AhaeAN54_001110 PF05173 Dihydrodipicolinate reductase, C-terminus AhaeAN54_001110 PF01113 Dihydrodipicolinate reductase, N-terminus AhaeAN54_001120 PF07690 Major Facilitator Superfamily AhaeAN54_001125 PF00248 Aldo/keto reductase family AhaeAN54_001130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_001130 PF03466 LysR substrate binding domain AhaeAN54_001140 PF00392 Bacterial regulatory proteins, gntR family AhaeAN54_001140 PF00155 Aminotransferase class I and II AhaeAN54_001145 PF08240 Alcohol dehydrogenase GroES-like domain AhaeAN54_001145 PF00107 Zinc-binding dehydrogenase AhaeAN54_001150 PF03352 Methyladenine glycosylase AhaeAN54_001165 PF00633 Helix-hairpin-helix motif AhaeAN54_001165 PF00730 HhH-GPD superfamily base excision DNA repair protein AhaeAN54_001165 PF10576 Iron-sulfur binding domain of endonuclease III AhaeAN54_001165 PF14815 NUDIX domain AhaeAN54_001175 PF07043 Protein of unknown function (DUF1328) AhaeAN54_001180 PF03692 Putative zinc- or iron-chelating domain AhaeAN54_001185 PF07995 Glucose / Sorbosone dehydrogenase AhaeAN54_001190 PF00144 Beta-lactamase AhaeAN54_001195 PF00004 ATPase family associated with various cellular activities (AAA) AhaeAN54_001195 PF12002 MgsA AAA+ ATPase C terminal AhaeAN54_001195 PF16193 AAA C-terminal domain AhaeAN54_001200 PF00892 EamA-like transporter family AhaeAN54_001205 PF01979 Amidohydrolase family AhaeAN54_001210 PF01259 SAICAR synthetase AhaeAN54_001220 PF00701 Dihydrodipicolinate synthetase family AhaeAN54_001225 PF00857 Isochorismatase family AhaeAN54_001230 PF01037 Lrp/AsnC ligand binding domain AhaeAN54_001280 PF13359 DDE superfamily endonuclease AhaeAN54_001280 PF13613 Helix-turn-helix of DDE superfamily endonuclease AhaeAN54_001355 PF00111 2Fe-2S iron-sulfur cluster binding domain AhaeAN54_001380 PF00529 HlyD membrane-fusion protein of T1SS AhaeAN54_001380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_001385 PF00873 AcrB/AcrD/AcrF family AhaeAN54_001405 PF07690 Major Facilitator Superfamily AhaeAN54_001450 PF13737 Transposase DDE domain AhaeAN54_001460 PF09278 MerR, DNA binding AhaeAN54_001460 PF00376 MerR family regulatory protein AhaeAN54_001465 PF00403 Heavy-metal-associated domain AhaeAN54_001470 PF01022 Bacterial regulatory protein, arsR family AhaeAN54_001480 PF01545 Cation efflux family AhaeAN54_001485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_001485 PF00529 HlyD membrane-fusion protein of T1SS AhaeAN54_001490 PF00873 AcrB/AcrD/AcrF family AhaeAN54_001495 PF02321 Outer membrane efflux protein AhaeAN54_001510 PF16916 Dimerisation domain of Zinc Transporter AhaeAN54_001510 PF01545 Cation efflux family AhaeAN54_001585 PF15978 Tn7-like transposition protein D AhaeAN54_001585 PF06527 TniQ AhaeAN54_001590 PF11426 Tn7 transposition regulator TnsC AhaeAN54_001590 PF13401 AAA domain AhaeAN54_001595 PF00665 Integrase core domain AhaeAN54_001600 PF08721 TnsA endonuclease C terminal AhaeAN54_001600 PF08722 TnsA endonuclease N terminal AhaeAN54_001605 PF01380 SIS domain AhaeAN54_001610 PF00132 Bacterial transferase hexapeptide (six repeats) AhaeAN54_001610 PF14602 Hexapeptide repeat of succinyl-transferase AhaeAN54_001610 PF12804 MobA-like NTP transferase domain AhaeAN54_001615 PF04608 Phosphatidylglycerophosphatase A AhaeAN54_001620 PF02769 AIR synthase related protein, C-terminal domain AhaeAN54_001620 PF00586 AIR synthase related protein, N-terminal domain AhaeAN54_001625 PF01029 NusB family AhaeAN54_001630 PF00885 6,7-dimethyl-8-ribityllumazine synthase AhaeAN54_001635 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AhaeAN54_001635 PF00925 GTP cyclohydrolase II AhaeAN54_001660 PF02580 D-Tyr-tRNA(Tyr) deacylase AhaeAN54_001665 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AhaeAN54_001665 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AhaeAN54_001670 PF00581 Rhodanese-like domain AhaeAN54_001675 PF02666 Phosphatidylserine decarboxylase AhaeAN54_001690 PF03466 LysR substrate binding domain AhaeAN54_001690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_001700 PF00989 PAS fold AhaeAN54_001700 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_001700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_001700 PF11808 Phosphate regulon sensor protein PhoR AhaeAN54_001705 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_001705 PF00072 Response regulator receiver domain AhaeAN54_001715 PF00106 short chain dehydrogenase AhaeAN54_001720 PF01554 MatE AhaeAN54_001725 PF00155 Aminotransferase class I and II AhaeAN54_001735 PF04286 Protein of unknown function (DUF445) AhaeAN54_001750 PF04262 Glutamate-cysteine ligase AhaeAN54_001755 PF02600 Disulfide bond formation protein DsbB AhaeAN54_001765 PF05728 Uncharacterised protein family (UPF0227) AhaeAN54_001770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_001770 PF01751 Toprim domain AhaeAN54_001770 PF00204 DNA gyrase B AhaeAN54_001770 PF00986 DNA gyrase B subunit, carboxyl terminus AhaeAN54_001785 PF02653 Branched-chain amino acid transport system / permease component AhaeAN54_001795 PF12399 Branched-chain amino acid ATP-binding cassette transporter AhaeAN54_001795 PF00005 ABC transporter AhaeAN54_001800 PF00005 ABC transporter AhaeAN54_001810 PF00583 Acetyltransferase (GNAT) family AhaeAN54_001835 PF11412 Disulphide bond corrector protein DsbC AhaeAN54_001835 PF02683 Cytochrome C biogenesis protein transmembrane region AhaeAN54_001845 PF13936 Helix-turn-helix domain AhaeAN54_001845 PF00665 Integrase core domain AhaeAN54_001865 PF02253 Phospholipase A1 AhaeAN54_001885 PF00664 ABC transporter transmembrane region AhaeAN54_001885 PF00005 ABC transporter AhaeAN54_001890 PF00990 Diguanylate cyclase, GGDEF domain AhaeAN54_001890 PF17151 Periplasmic sensor domain AhaeAN54_001895 PF07859 alpha/beta hydrolase fold AhaeAN54_001905 PF03960 ArsC family AhaeAN54_001910 PF03372 Endonuclease/Exonuclease/phosphatase family AhaeAN54_001915 PF00156 Phosphoribosyl transferase domain AhaeAN54_001925 PF13737 Transposase DDE domain AhaeAN54_001930 PF00106 short chain dehydrogenase AhaeAN54_001955 PF01047 MarR family AhaeAN54_001960 PF00255 Glutathione peroxidase AhaeAN54_001965 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AhaeAN54_001965 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AhaeAN54_001970 PF03033 Glycosyltransferase family 28 N-terminal domain AhaeAN54_001970 PF04101 Glycosyltransferase family 28 C-terminal domain AhaeAN54_001975 PF02875 Mur ligase family, glutamate ligase domain AhaeAN54_001975 PF01225 Mur ligase family, catalytic domain AhaeAN54_001975 PF08245 Mur ligase middle domain AhaeAN54_001980 PF07478 D-ala D-ala ligase C-terminus AhaeAN54_001980 PF01820 D-ala D-ala ligase N-terminus AhaeAN54_001985 PF03799 Cell division protein FtsQ AhaeAN54_001985 PF08478 POTRA domain, FtsQ-type AhaeAN54_001990 PF02491 SHS2 domain inserted in FTSA AhaeAN54_001995 PF12327 FtsZ family, C-terminal domain AhaeAN54_001995 PF00091 Tubulin/FtsZ family, GTPase domain AhaeAN54_002000 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AhaeAN54_002015 PF00456 Transketolase, thiamine diphosphate binding domain AhaeAN54_002015 PF17831 Pyruvate dehydrogenase E1 component middle domain AhaeAN54_002020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AhaeAN54_002020 PF02817 e3 binding domain AhaeAN54_002020 PF00364 Biotin-requiring enzyme AhaeAN54_002035 PF01169 Uncharacterized protein family UPF0016 AhaeAN54_002040 PF00593 TonB dependent receptor AhaeAN54_002040 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_002045 PF01613 Flavin reductase like domain AhaeAN54_002045 PF00258 Flavodoxin AhaeAN54_002050 PF03692 Putative zinc- or iron-chelating domain AhaeAN54_002055 PF00478 IMP dehydrogenase / GMP reductase domain AhaeAN54_002055 PF00571 CBS domain AhaeAN54_002060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AhaeAN54_002060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AhaeAN54_002060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AhaeAN54_002060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AhaeAN54_002065 PF01243 Pyridoxamine 5'-phosphate oxidase AhaeAN54_002065 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AhaeAN54_002070 PF17768 RecJ OB domain AhaeAN54_002070 PF02272 DHHA1 domain AhaeAN54_002070 PF01368 DHH family AhaeAN54_002090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AhaeAN54_002100 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AhaeAN54_002110 PF05552 Conserved TM helix AhaeAN54_002110 PF00924 Mechanosensitive ion channel AhaeAN54_002115 PF00501 AMP-binding enzyme AhaeAN54_002115 PF13193 AMP-binding enzyme C-terminal domain AhaeAN54_002115 PF16177 Acetyl-coenzyme A synthetase N-terminus AhaeAN54_002120 PF00296 Luciferase-like monooxygenase AhaeAN54_002125 PF03358 NADPH-dependent FMN reductase AhaeAN54_002130 PF00072 Response regulator receiver domain AhaeAN54_002130 PF00196 Bacterial regulatory proteins, luxR family AhaeAN54_002140 PF00905 Penicillin binding protein transpeptidase domain AhaeAN54_002145 PF00990 Diguanylate cyclase, GGDEF domain AhaeAN54_002145 PF08448 PAS fold AhaeAN54_002155 PF17760 UvrA interaction domain AhaeAN54_002155 PF17755 UvrA DNA-binding domain AhaeAN54_002170 PF08543 Phosphomethylpyrimidine kinase AhaeAN54_002170 PF03070 TENA/THI-4/PQQC family AhaeAN54_002170 PF02581 Thiamine monophosphate synthase AhaeAN54_002180 PF07690 Major Facilitator Superfamily AhaeAN54_002185 PF00436 Single-strand binding protein family AhaeAN54_002195 PF00324 Amino acid permease AhaeAN54_002200 PF00155 Aminotransferase class I and II AhaeAN54_002200 PF00392 Bacterial regulatory proteins, gntR family AhaeAN54_002205 PF00202 Aminotransferase class-III AhaeAN54_002210 PF00171 Aldehyde dehydrogenase family AhaeAN54_002215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_002220 PF00857 Isochorismatase family AhaeAN54_002225 PF02678 Pirin AhaeAN54_002225 PF05726 Pirin C-terminal cupin domain AhaeAN54_002230 PF01593 Flavin containing amine oxidoreductase AhaeAN54_002285 PF13737 Transposase DDE domain AhaeAN54_002290 PF13356 Arm DNA-binding domain AhaeAN54_002290 PF00589 Phage integrase family AhaeAN54_002310 PF00436 Single-strand binding protein family AhaeAN54_002385 PF00772 DnaB-like helicase N terminal domain AhaeAN54_002385 PF03796 DnaB-like helicase C terminal domain AhaeAN54_002420 PF13356 Arm DNA-binding domain AhaeAN54_002420 PF00589 Phage integrase family AhaeAN54_002430 PF02705 K+ potassium transporter AhaeAN54_002445 PF00230 Major intrinsic protein AhaeAN54_002460 PF00977 Histidine biosynthesis protein AhaeAN54_002465 PF01636 Phosphotransferase enzyme family AhaeAN54_002485 PF01740 STAS domain AhaeAN54_002485 PF00916 Sulfate permease family AhaeAN54_002490 PF00977 Histidine biosynthesis protein AhaeAN54_002500 PF00665 Integrase core domain AhaeAN54_002500 PF13936 Helix-turn-helix domain AhaeAN54_002505 PF00117 Glutamine amidotransferase class-I AhaeAN54_002510 PF00475 Imidazoleglycerol-phosphate dehydratase AhaeAN54_002535 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AhaeAN54_002535 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AhaeAN54_002540 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_002540 PF00672 HAMP domain AhaeAN54_002540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_002545 PF00072 Response regulator receiver domain AhaeAN54_002545 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_002550 PF17674 HHH domain AhaeAN54_002550 PF09371 Tex-like protein N-terminal domain AhaeAN54_002550 PF16921 Tex protein YqgF-like domain AhaeAN54_002550 PF00575 S1 RNA binding domain AhaeAN54_002575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_002575 PF03466 LysR substrate binding domain AhaeAN54_002585 PF13411 MerR HTH family regulatory protein AhaeAN54_002590 PF07993 Male sterility protein AhaeAN54_002590 PF00550 Phosphopantetheine attachment site AhaeAN54_002595 PF00106 short chain dehydrogenase AhaeAN54_002600 PF01053 Cys/Met metabolism PLP-dependent enzyme AhaeAN54_002605 PF00005 ABC transporter AhaeAN54_002605 PF12848 ABC transporter AhaeAN54_002635 PF00529 HlyD membrane-fusion protein of T1SS AhaeAN54_002635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_002640 PF00873 AcrB/AcrD/AcrF family AhaeAN54_002645 PF01545 Cation efflux family AhaeAN54_002740 PF00324 Amino acid permease AhaeAN54_002755 PF00749 tRNA synthetases class I (E and Q), catalytic domain AhaeAN54_002770 PF01795 MraW methylase family AhaeAN54_002780 PF03717 Penicillin-binding Protein dimerisation domain AhaeAN54_002780 PF00905 Penicillin binding protein transpeptidase domain AhaeAN54_002785 PF01225 Mur ligase family, catalytic domain AhaeAN54_002785 PF02875 Mur ligase family, glutamate ligase domain AhaeAN54_002785 PF08245 Mur ligase middle domain AhaeAN54_002790 PF02875 Mur ligase family, glutamate ligase domain AhaeAN54_002790 PF01225 Mur ligase family, catalytic domain AhaeAN54_002790 PF08245 Mur ligase middle domain AhaeAN54_002795 PF00953 Glycosyl transferase family 4 AhaeAN54_002800 PF13847 Methyltransferase domain AhaeAN54_002805 PF17092 Penicillin-binding protein OB-like domain AhaeAN54_002805 PF00912 Transglycosylase AhaeAN54_002805 PF00905 Penicillin binding protein transpeptidase domain AhaeAN54_002830 PF00263 Bacterial type II and III secretion system protein AhaeAN54_002830 PF11741 AMIN domain AhaeAN54_002830 PF03958 Bacterial type II/III secretion system short domain AhaeAN54_002830 PF07660 Secretin and TonB N terminus short domain AhaeAN54_002835 PF01202 Shikimate kinase AhaeAN54_002840 PF01761 3-dehydroquinate synthase AhaeAN54_002850 PF01493 GXGXG motif AhaeAN54_002850 PF01645 Conserved region in glutamate synthase AhaeAN54_002850 PF04898 Glutamate synthase central domain AhaeAN54_002850 PF00310 Glutamine amidotransferases class-II AhaeAN54_002855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AhaeAN54_002855 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_002865 PF04011 LemA family AhaeAN54_002870 PF04536 TPM domain AhaeAN54_002880 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AhaeAN54_002885 PF01850 PIN domain AhaeAN54_002915 PF04932 O-Antigen ligase AhaeAN54_002915 PF15864 Protein glycosylation ligase AhaeAN54_002915 PF11846 Virulence factor membrane-bound polymerase, C-terminal AhaeAN54_002920 PF00210 Ferritin-like domain AhaeAN54_002925 PF04324 BFD-like [2Fe-2S] binding domain AhaeAN54_002930 PF01042 Endoribonuclease L-PSP AhaeAN54_002935 PF02824 TGS domain AhaeAN54_002935 PF04607 Region found in RelA / SpoT proteins AhaeAN54_002935 PF13291 ACT domain AhaeAN54_002940 PF01192 RNA polymerase Rpb6 AhaeAN54_002945 PF00625 Guanylate kinase AhaeAN54_002950 PF02401 LytB protein AhaeAN54_002955 PF07963 Prokaryotic N-terminal methylation motif AhaeAN54_002985 PF07963 Prokaryotic N-terminal methylation motif AhaeAN54_002985 PF00114 Pilin (bacterial filament) AhaeAN54_003015 PF00114 Pilin (bacterial filament) AhaeAN54_003015 PF07963 Prokaryotic N-terminal methylation motif AhaeAN54_003020 PF00886 Ribosomal protein S16 AhaeAN54_003025 PF01782 RimM N-terminal domain AhaeAN54_003025 PF05239 PRC-barrel domain AhaeAN54_003030 PF01746 tRNA (Guanine-1)-methyltransferase AhaeAN54_003035 PF01245 Ribosomal protein L19 AhaeAN54_003040 PF00561 alpha/beta hydrolase fold AhaeAN54_003045 PF03280 Proteobacterial lipase chaperone protein AhaeAN54_003050 PF16198 tRNA pseudouridylate synthase B C-terminal domain AhaeAN54_003050 PF01509 TruB family pseudouridylate synthase (N terminal domain) AhaeAN54_003050 PF09157 Pseudouridine synthase II TruB, C-terminal AhaeAN54_003055 PF01925 Sulfite exporter TauE/SafE AhaeAN54_003065 PF00892 EamA-like transporter family AhaeAN54_003070 PF00892 EamA-like transporter family AhaeAN54_003075 PF10145 Phage-related minor tail protein AhaeAN54_003075 PF01464 Transglycosylase SLT domain AhaeAN54_003075 PF01551 Peptidase family M23 AhaeAN54_003080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AhaeAN54_003080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AhaeAN54_003085 PF01565 FAD binding domain AhaeAN54_003085 PF02913 FAD linked oxidases, C-terminal domain AhaeAN54_003100 PF03992 Antibiotic biosynthesis monooxygenase AhaeAN54_003105 PF02525 Flavodoxin-like fold AhaeAN54_003115 PF07690 Major Facilitator Superfamily AhaeAN54_003120 PF12805 FUSC-like inner membrane protein yccS AhaeAN54_003125 PF01594 AI-2E family transporter AhaeAN54_003130 PF13614 AAA domain AhaeAN54_003140 PF01209 ubiE/COQ5 methyltransferase family AhaeAN54_003155 PF08241 Methyltransferase domain AhaeAN54_003175 PF00082 Subtilase family AhaeAN54_003185 PF00743 Flavin-binding monooxygenase-like AhaeAN54_003205 PF02092 Glycyl-tRNA synthetase beta subunit AhaeAN54_003205 PF05746 DALR anticodon binding domain AhaeAN54_003210 PF02091 Glycyl-tRNA synthetase alpha subunit AhaeAN54_003245 PF00939 Sodium:sulfate symporter transmembrane region AhaeAN54_003255 PF04024 PspC domain AhaeAN54_003265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_003265 PF12806 Acetyl-CoA dehydrogenase C-terminal like AhaeAN54_003265 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_003265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_003275 PF08501 Shikimate dehydrogenase substrate binding domain AhaeAN54_003275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AhaeAN54_003275 PF01488 Shikimate / quinate 5-dehydrogenase AhaeAN54_003280 PF01850 PIN domain AhaeAN54_003300 PF00925 GTP cyclohydrolase II AhaeAN54_003305 PF02779 Transketolase, pyrimidine binding domain AhaeAN54_003305 PF02780 Transketolase, C-terminal domain AhaeAN54_003305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AhaeAN54_003310 PF00459 Inositol monophosphatase family AhaeAN54_003320 PF00271 Helicase conserved C-terminal domain AhaeAN54_003320 PF03880 DbpA RNA binding domain AhaeAN54_003320 PF00270 DEAD/DEAH box helicase AhaeAN54_003320 PF12343 Cold shock protein DEAD box A AhaeAN54_003325 PF00005 ABC transporter AhaeAN54_003330 PF02405 Permease MlaE AhaeAN54_003335 PF02470 MlaD protein AhaeAN54_003340 PF05494 MlaC protein AhaeAN54_003350 PF01757 Acyltransferase family AhaeAN54_003355 PF01544 CorA-like Mg2+ transporter protein AhaeAN54_003360 PF03641 Possible lysine decarboxylase AhaeAN54_003370 PF00156 Phosphoribosyl transferase domain AhaeAN54_003375 PF17191 RecG wedge domain AhaeAN54_003375 PF00270 DEAD/DEAH box helicase AhaeAN54_003375 PF00271 Helicase conserved C-terminal domain AhaeAN54_003390 PF01553 Acyltransferase AhaeAN54_003400 PF00375 Sodium:dicarboxylate symporter family AhaeAN54_003420 PF01926 50S ribosome-binding GTPase AhaeAN54_003425 PF02082 Transcriptional regulator AhaeAN54_003430 PF00042 Globin AhaeAN54_003430 PF00175 Oxidoreductase NAD-binding domain AhaeAN54_003430 PF00970 Oxidoreductase FAD-binding domain AhaeAN54_003435 PF05872 Bacterial protein of unknown function (DUF853) AhaeAN54_003440 PF01053 Cys/Met metabolism PLP-dependent enzyme AhaeAN54_003445 PF00117 Glutamine amidotransferase class-I AhaeAN54_003450 PF00338 Ribosomal protein S10p/S20e AhaeAN54_003455 PF00297 Ribosomal protein L3 AhaeAN54_003460 PF00573 Ribosomal protein L4/L1 family AhaeAN54_003465 PF00276 Ribosomal protein L23 AhaeAN54_003470 PF00181 Ribosomal Proteins L2, RNA binding domain AhaeAN54_003470 PF03947 Ribosomal Proteins L2, C-terminal domain AhaeAN54_003475 PF00203 Ribosomal protein S19 AhaeAN54_003480 PF00237 Ribosomal protein L22p/L17e AhaeAN54_003485 PF07650 KH domain AhaeAN54_003485 PF00189 Ribosomal protein S3, C-terminal domain AhaeAN54_003490 PF00252 Ribosomal protein L16p/L10e AhaeAN54_003495 PF00831 Ribosomal L29 protein AhaeAN54_003500 PF00366 Ribosomal protein S17 AhaeAN54_003505 PF00238 Ribosomal protein L14p/L23e AhaeAN54_003510 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AhaeAN54_003510 PF00467 KOW motif AhaeAN54_003515 PF00673 ribosomal L5P family C-terminus AhaeAN54_003515 PF00281 Ribosomal protein L5 AhaeAN54_003520 PF00253 Ribosomal protein S14p/S29e AhaeAN54_003525 PF00410 Ribosomal protein S8 AhaeAN54_003530 PF00347 Ribosomal protein L6 AhaeAN54_003535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AhaeAN54_003540 PF03719 Ribosomal protein S5, C-terminal domain AhaeAN54_003540 PF00333 Ribosomal protein S5, N-terminal domain AhaeAN54_003545 PF00327 Ribosomal protein L30p/L7e AhaeAN54_003550 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AhaeAN54_003555 PF00344 SecY translocase AhaeAN54_003560 PF00444 Ribosomal protein L36 AhaeAN54_003565 PF00416 Ribosomal protein S13/S18 AhaeAN54_003570 PF00411 Ribosomal protein S11 AhaeAN54_003575 PF00163 Ribosomal protein S4/S9 N-terminal domain AhaeAN54_003575 PF01479 S4 domain AhaeAN54_003580 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AhaeAN54_003580 PF01000 RNA polymerase Rpb3/RpoA insert domain AhaeAN54_003580 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AhaeAN54_003585 PF01196 Ribosomal protein L17 AhaeAN54_003595 PF00743 Flavin-binding monooxygenase-like AhaeAN54_003605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_003605 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_003605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_003610 PF03937 Flavinator of succinate dehydrogenase AhaeAN54_003640 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AhaeAN54_003645 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) AhaeAN54_003665 PF01432 Peptidase family M3 AhaeAN54_003670 PF17876 Cold shock domain AhaeAN54_003670 PF08461 Ribonuclease R winged-helix domain AhaeAN54_003670 PF08206 Ribonuclease B OB domain AhaeAN54_003670 PF00773 RNB domain AhaeAN54_003670 PF00575 S1 RNA binding domain AhaeAN54_003695 PF01970 Tripartite tricarboxylate transporter TctA family AhaeAN54_003715 PF13737 Transposase DDE domain AhaeAN54_003750 PF00665 Integrase core domain AhaeAN54_003750 PF13936 Helix-turn-helix domain AhaeAN54_003770 PF01557 Fumarylacetoacetate (FAA) hydrolase family AhaeAN54_003780 PF12833 Helix-turn-helix domain AhaeAN54_003790 PF03631 Virulence factor BrkB AhaeAN54_003795 PF03358 NADPH-dependent FMN reductase AhaeAN54_003800 PF01790 Prolipoprotein diacylglyceryl transferase AhaeAN54_003815 PF00902 Sec-independent protein translocase protein (TatC) AhaeAN54_003820 PF02416 mttA/Hcf106 family AhaeAN54_003825 PF02416 mttA/Hcf106 family AhaeAN54_003830 PF01725 Ham1 family AhaeAN54_003845 PF07021 Methionine biosynthesis protein MetW AhaeAN54_003845 PF00561 alpha/beta hydrolase fold AhaeAN54_003850 PF00561 alpha/beta hydrolase fold AhaeAN54_003855 PF08502 LeuA allosteric (dimerisation) domain AhaeAN54_003855 PF00682 HMGL-like AhaeAN54_003865 PF00593 TonB dependent receptor AhaeAN54_003865 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_003870 PF05697 Bacterial trigger factor protein (TF) AhaeAN54_003870 PF05698 Bacterial trigger factor protein (TF) C-terminus AhaeAN54_003870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhaeAN54_003875 PF00574 Clp protease AhaeAN54_003880 PF07724 AAA domain (Cdc48 subfamily) AhaeAN54_003880 PF10431 C-terminal, D2-small domain, of ClpB protein AhaeAN54_003880 PF06689 ClpX C4-type zinc finger AhaeAN54_003895 PF05681 Fumarate hydratase (Fumerase) AhaeAN54_003895 PF05683 Fumarase C-terminus AhaeAN54_003900 PF12833 Helix-turn-helix domain AhaeAN54_003900 PF02311 AraC-like ligand binding domain AhaeAN54_003925 PF01515 Phosphate acetyl/butaryl transferase AhaeAN54_003925 PF07085 DRTGG domain AhaeAN54_003930 PF00871 Acetokinase family AhaeAN54_003940 PF00171 Aldehyde dehydrogenase family AhaeAN54_003955 PF00933 Glycosyl hydrolase family 3 N terminal domain AhaeAN54_003960 PF17804 Tail specific protease N-terminal domain AhaeAN54_003960 PF03572 Peptidase family S41 AhaeAN54_003960 PF00595 PDZ domain AhaeAN54_003960 PF11818 C-terminal domain of tail specific protease (DUF3340) AhaeAN54_003980 PF16360 GTP-binding GTPase Middle Region AhaeAN54_003980 PF01926 50S ribosome-binding GTPase AhaeAN54_003980 PF13167 GTP-binding GTPase N-terminal AhaeAN54_003990 PF13091 PLD-like domain AhaeAN54_003995 PF00149 Calcineurin-like phosphoesterase AhaeAN54_003995 PF10518 TAT (twin-arginine translocation) pathway signal sequence AhaeAN54_004000 PF00691 OmpA family AhaeAN54_004000 PF01389 OmpA-like transmembrane domain AhaeAN54_004010 PF17152 Periplasmic sensor domain AhaeAN54_004010 PF00990 Diguanylate cyclase, GGDEF domain AhaeAN54_004045 PF01594 AI-2E family transporter AhaeAN54_004050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_004050 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_004050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_004060 PF13302 Acetyltransferase (GNAT) domain AhaeAN54_004065 PF17932 Tetracyclin repressor-like, C-terminal domain AhaeAN54_004065 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_004080 PF01039 Carboxyl transferase domain AhaeAN54_004085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_004085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_004085 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_004095 PF00289 Biotin carboxylase, N-terminal domain AhaeAN54_004095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AhaeAN54_004095 PF02785 Biotin carboxylase C-terminal domain AhaeAN54_004095 PF00364 Biotin-requiring enzyme AhaeAN54_004110 PF03372 Endonuclease/Exonuclease/phosphatase family AhaeAN54_004130 PF13737 Transposase DDE domain AhaeAN54_004140 PF04386 Stringent starvation protein B AhaeAN54_004145 PF00043 Glutathione S-transferase, C-terminal domain AhaeAN54_004145 PF02798 Glutathione S-transferase, N-terminal domain AhaeAN54_004150 PF00380 Ribosomal protein S9/S16 AhaeAN54_004155 PF00572 Ribosomal protein L13 AhaeAN54_004165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AhaeAN54_004170 PF00398 Ribosomal RNA adenine dimethylase AhaeAN54_004175 PF00149 Calcineurin-like phosphoesterase AhaeAN54_004180 PF13439 Glycosyltransferase Family 4 AhaeAN54_004180 PF00534 Glycosyl transferases group 1 AhaeAN54_004185 PF01569 PAP2 superfamily AhaeAN54_004190 PF04384 Iron-sulphur cluster assembly AhaeAN54_004195 PF00334 Nucleoside diphosphate kinase AhaeAN54_004200 PF04055 Radical SAM superfamily AhaeAN54_004210 PF13464 Domain of unknown function (DUF4115) AhaeAN54_004215 PF04551 GcpE protein AhaeAN54_004220 PF13393 Histidyl-tRNA synthetase AhaeAN54_004220 PF03129 Anticodon binding domain AhaeAN54_004230 PF13360 PQQ-like domain AhaeAN54_004235 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AhaeAN54_004235 PF01926 50S ribosome-binding GTPase AhaeAN54_004245 PF02355 Protein export membrane protein AhaeAN54_004245 PF07549 SecD/SecF GG Motif AhaeAN54_004250 PF02355 Protein export membrane protein AhaeAN54_004250 PF13721 SecD export protein N-terminal TM region AhaeAN54_004250 PF07549 SecD/SecF GG Motif AhaeAN54_004255 PF02699 Preprotein translocase subunit AhaeAN54_004260 PF01702 Queuine tRNA-ribosyltransferase AhaeAN54_004275 PF02547 Queuosine biosynthesis protein AhaeAN54_004285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AhaeAN54_004285 PF00072 Response regulator receiver domain AhaeAN54_004285 PF01627 Hpt domain AhaeAN54_004285 PF00672 HAMP domain AhaeAN54_004285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_004285 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_004290 PF03710 Glutamate-ammonia ligase adenylyltransferase AhaeAN54_004290 PF08335 GlnD PII-uridylyltransferase AhaeAN54_004295 PF01063 Amino-transferase class IV AhaeAN54_004300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AhaeAN54_004300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AhaeAN54_004300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AhaeAN54_004310 PF17101 Stealth protein CR1, conserved region 1 AhaeAN54_004310 PF11380 Stealth protein CR2, conserved region 2 AhaeAN54_004325 PF01757 Acyltransferase family AhaeAN54_004345 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AhaeAN54_004360 PF02938 GAD domain AhaeAN54_004360 PF01336 OB-fold nucleic acid binding domain AhaeAN54_004360 PF00152 tRNA synthetases class II (D, K and N) AhaeAN54_004370 PF00593 TonB dependent receptor AhaeAN54_004370 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_004395 PF06146 Phosphate-starvation-inducible E AhaeAN54_004400 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_004400 PF12806 Acetyl-CoA dehydrogenase C-terminal like AhaeAN54_004400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_004400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_004405 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_004405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_004405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_004405 PF12806 Acetyl-CoA dehydrogenase C-terminal like AhaeAN54_004415 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_004415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_004415 PF00672 HAMP domain AhaeAN54_004420 PF00072 Response regulator receiver domain AhaeAN54_004420 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_004435 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AhaeAN54_004455 PF01923 Cobalamin adenosyltransferase AhaeAN54_004460 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_004460 PF00593 TonB dependent receptor AhaeAN54_004465 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AhaeAN54_004470 PF00291 Pyridoxal-phosphate dependent enzyme AhaeAN54_004475 PF00149 Calcineurin-like phosphoesterase AhaeAN54_004500 PF00290 Tryptophan synthase alpha chain AhaeAN54_004505 PF01039 Carboxyl transferase domain AhaeAN54_004510 PF08245 Mur ligase middle domain AhaeAN54_004510 PF02875 Mur ligase family, glutamate ligase domain AhaeAN54_004525 PF00578 AhpC/TSA family AhaeAN54_004525 PF10417 C-terminal domain of 1-Cys peroxiredoxin AhaeAN54_004530 PF01043 SecA preprotein cross-linking domain AhaeAN54_004530 PF07517 SecA DEAD-like domain AhaeAN54_004530 PF07516 SecA Wing and Scaffold domain AhaeAN54_004530 PF02810 SEC-C motif AhaeAN54_004545 PF07690 Major Facilitator Superfamily AhaeAN54_004545 PF00083 Sugar (and other) transporter AhaeAN54_004550 PF03006 Haemolysin-III related AhaeAN54_004560 PF13673 Acetyltransferase (GNAT) domain AhaeAN54_004580 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AhaeAN54_004580 PF00378 Enoyl-CoA hydratase/isomerase AhaeAN54_004580 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AhaeAN54_004585 PF00108 Thiolase, N-terminal domain AhaeAN54_004585 PF02803 Thiolase, C-terminal domain AhaeAN54_004595 PF12833 Helix-turn-helix domain AhaeAN54_004595 PF02311 AraC-like ligand binding domain AhaeAN54_004600 PF02515 CoA-transferase family III AhaeAN54_004605 PF04966 Carbohydrate-selective porin, OprB family AhaeAN54_004610 PF01011 PQQ enzyme repeat AhaeAN54_004620 PF13737 Transposase DDE domain AhaeAN54_004635 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AhaeAN54_004635 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AhaeAN54_004650 PF00108 Thiolase, N-terminal domain AhaeAN54_004650 PF02803 Thiolase, C-terminal domain AhaeAN54_004660 PF00691 OmpA family AhaeAN54_004660 PF13505 Outer membrane protein beta-barrel domain AhaeAN54_004665 PF13505 Outer membrane protein beta-barrel domain AhaeAN54_004665 PF00691 OmpA family AhaeAN54_004670 PF01139 tRNA-splicing ligase RtcB AhaeAN54_004675 PF00324 Amino acid permease AhaeAN54_004680 PF05175 Methyltransferase small domain AhaeAN54_004680 PF08468 Methyltransferase small domain N-terminal AhaeAN54_004685 PF00860 Permease family AhaeAN54_004695 PF01741 Large-conductance mechanosensitive channel, MscL AhaeAN54_004705 PF09312 SurA N-terminal domain AhaeAN54_004705 PF00639 PPIC-type PPIASE domain AhaeAN54_004710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AhaeAN54_004710 PF06827 Zinc finger found in FPG and IleRS AhaeAN54_004710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AhaeAN54_004715 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_004715 PF00593 TonB dependent receptor AhaeAN54_004725 PF01571 Aminomethyltransferase folate-binding domain AhaeAN54_004735 PF08274 PhnA Zinc-Ribbon AhaeAN54_004735 PF03831 PhnA domain AhaeAN54_004740 PF07411 Domain of unknown function (DUF1508) AhaeAN54_004745 PF03129 Anticodon binding domain AhaeAN54_004745 PF04073 Aminoacyl-tRNA editing domain AhaeAN54_004745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AhaeAN54_004755 PF00072 Response regulator receiver domain AhaeAN54_004760 PF00072 Response regulator receiver domain AhaeAN54_004765 PF01584 CheW-like domain AhaeAN54_004770 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AhaeAN54_004770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AhaeAN54_004775 PF01584 CheW-like domain AhaeAN54_004775 PF02895 Signal transducing histidine kinase, homodimeric domain AhaeAN54_004775 PF02895 Signal transducing histidine kinase, homodimeric domain AhaeAN54_004775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_004775 PF07194 P2 response regulator binding domain AhaeAN54_004775 PF01584 CheW-like domain AhaeAN54_004775 PF01627 Hpt domain AhaeAN54_004775 PF01627 Hpt domain AhaeAN54_004775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_004775 PF07194 P2 response regulator binding domain AhaeAN54_004785 PF07687 Peptidase dimerisation domain AhaeAN54_004785 PF01546 Peptidase family M20/M25/M40 AhaeAN54_004790 PF08085 Entericidin EcnA/B family AhaeAN54_004800 PF04304 Protein of unknown function (DUF454) AhaeAN54_004805 PF17969 L,D-transpeptidase C-terminal domain AhaeAN54_004805 PF03734 L,D-transpeptidase catalytic domain AhaeAN54_004850 PF00258 Flavodoxin AhaeAN54_004850 PF00667 FAD binding domain AhaeAN54_004850 PF00175 Oxidoreductase NAD-binding domain AhaeAN54_004860 PF12805 FUSC-like inner membrane protein yccS AhaeAN54_004865 PF07690 Major Facilitator Superfamily AhaeAN54_004870 PF00881 Nitroreductase family AhaeAN54_004880 PF03616 Sodium/glutamate symporter AhaeAN54_004885 PF01235 Sodium:alanine symporter family AhaeAN54_004890 PF01734 Patatin-like phospholipase AhaeAN54_004895 PF05992 SbmA/BacA-like family AhaeAN54_004910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_004910 PF03466 LysR substrate binding domain AhaeAN54_004940 PF00665 Integrase core domain AhaeAN54_004940 PF13936 Helix-turn-helix domain AhaeAN54_004955 PF02934 GatB/GatE catalytic domain AhaeAN54_004955 PF02637 GatB domain AhaeAN54_004960 PF01425 Amidase AhaeAN54_004965 PF02686 Glu-tRNAGln amidotransferase C subunit AhaeAN54_004975 PF04085 rod shape-determining protein MreC AhaeAN54_004985 PF02545 Maf-like protein AhaeAN54_004990 PF10150 Ribonuclease E/G family AhaeAN54_004990 PF00575 S1 RNA binding domain AhaeAN54_005000 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AhaeAN54_005000 PF06974 Protein of unknown function (DUF1298) AhaeAN54_005005 PF01507 Phosphoadenosine phosphosulfate reductase family AhaeAN54_005020 PF03814 Potassium-transporting ATPase A subunit AhaeAN54_005030 PF02669 K+-transporting ATPase, c chain AhaeAN54_005035 PF02702 Osmosensitive K+ channel His kinase sensor domain AhaeAN54_005035 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_005035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_005035 PF13493 Domain of unknown function (DUF4118) AhaeAN54_005040 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_005040 PF00072 Response regulator receiver domain AhaeAN54_005045 PF00171 Aldehyde dehydrogenase family AhaeAN54_005050 PF01569 PAP2 superfamily AhaeAN54_005060 PF00111 2Fe-2S iron-sulfur cluster binding domain AhaeAN54_005060 PF00175 Oxidoreductase NAD-binding domain AhaeAN54_005065 PF00355 Rieske [2Fe-2S] domain AhaeAN54_005075 PF03573 outer membrane porin, OprD family AhaeAN54_005085 PF00324 Amino acid permease AhaeAN54_005090 PF04303 PrpF protein AhaeAN54_005095 PF00348 Polyprenyl synthetase AhaeAN54_005100 PF01145 SPFH domain / Band 7 family AhaeAN54_005110 PF01734 Patatin-like phospholipase AhaeAN54_005130 PF00884 Sulfatase AhaeAN54_005130 PF08019 Phosphoethanolamine transferase EptA/EptB AhaeAN54_005135 PF00072 Response regulator receiver domain AhaeAN54_005135 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_005140 PF08521 Two-component sensor kinase N-terminal AhaeAN54_005140 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_005140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_005150 PF00005 ABC transporter AhaeAN54_005155 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_005160 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_005165 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhaeAN54_005170 PF00909 Ammonium Transporter Family AhaeAN54_005190 PF08264 Anticodon-binding domain of tRNA AhaeAN54_005190 PF10458 Valyl tRNA synthetase tRNA binding arm AhaeAN54_005190 PF00133 tRNA synthetases class I (I, L, M and V) AhaeAN54_005215 PF01906 Putative heavy-metal-binding AhaeAN54_005220 PF01906 Putative heavy-metal-binding AhaeAN54_005225 PF02321 Outer membrane efflux protein AhaeAN54_005230 PF00873 AcrB/AcrD/AcrF family AhaeAN54_005235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_005235 PF00529 HlyD membrane-fusion protein of T1SS AhaeAN54_005240 PF01569 PAP2 superfamily AhaeAN54_005250 PF00348 Polyprenyl synthetase AhaeAN54_005255 PF00829 Ribosomal prokaryotic L21 protein AhaeAN54_005260 PF01016 Ribosomal L27 protein AhaeAN54_005265 PF05726 Pirin C-terminal cupin domain AhaeAN54_005265 PF02678 Pirin AhaeAN54_005270 PF03548 Outer membrane lipoprotein carrier protein LolA AhaeAN54_005280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AhaeAN54_005280 PF02403 Seryl-tRNA synthetase N-terminal domain AhaeAN54_005285 PF14824 Sirohaem biosynthesis protein central AhaeAN54_005285 PF10414 Sirohaem synthase dimerisation region AhaeAN54_005285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AhaeAN54_005290 PF00588 SpoU rRNA Methylase family AhaeAN54_005300 PF01638 HxlR-like helix-turn-helix AhaeAN54_005305 PF03358 NADPH-dependent FMN reductase AhaeAN54_005310 PF13520 Amino acid permease AhaeAN54_005315 PF00465 Iron-containing alcohol dehydrogenase AhaeAN54_005325 PF03099 Biotin/lipoate A/B protein ligase family AhaeAN54_005330 PF04359 Protein of unknown function (DUF493) AhaeAN54_005335 PF04546 Sigma-70, non-essential region AhaeAN54_005335 PF03979 Sigma-70 factor, region 1.1 AhaeAN54_005335 PF00140 Sigma-70 factor, region 1.2 AhaeAN54_005335 PF04542 Sigma-70 region 2 AhaeAN54_005335 PF04539 Sigma-70 region 3 AhaeAN54_005335 PF04545 Sigma-70, region 4 AhaeAN54_005355 PF01810 LysE type translocator AhaeAN54_005360 PF03466 LysR substrate binding domain AhaeAN54_005360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_005365 PF05724 Thiopurine S-methyltransferase (TPMT) AhaeAN54_005370 PF09335 SNARE associated Golgi protein AhaeAN54_005385 PF00285 Citrate synthase, C-terminal domain AhaeAN54_005390 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AhaeAN54_005395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AhaeAN54_005400 PF00890 FAD binding domain AhaeAN54_005400 PF02910 Fumarate reductase flavoprotein C-term AhaeAN54_005405 PF13085 2Fe-2S iron-sulfur cluster binding domain AhaeAN54_005415 PF02779 Transketolase, pyrimidine binding domain AhaeAN54_005415 PF16078 2-oxoglutarate dehydrogenase N-terminus AhaeAN54_005415 PF00676 Dehydrogenase E1 component AhaeAN54_005415 PF16870 2-oxoglutarate dehydrogenase C-terminal AhaeAN54_005420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AhaeAN54_005420 PF00364 Biotin-requiring enzyme AhaeAN54_005420 PF02817 e3 binding domain AhaeAN54_005425 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_005425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AhaeAN54_005430 PF00549 CoA-ligase AhaeAN54_005430 PF08442 ATP-grasp domain AhaeAN54_005435 PF00549 CoA-ligase AhaeAN54_005435 PF02629 CoA binding domain AhaeAN54_005440 PF15975 Flotillin AhaeAN54_005440 PF01145 SPFH domain / Band 7 family AhaeAN54_005445 PF07290 Protein of unknown function (DUF1449) AhaeAN54_005450 PF00579 tRNA synthetases class I (W and Y) AhaeAN54_005455 PF05661 Protein of unknown function (DUF808) AhaeAN54_005460 PF04228 Putative neutral zinc metallopeptidase AhaeAN54_005470 PF13737 Transposase DDE domain AhaeAN54_005475 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AhaeAN54_005485 PF00132 Bacterial transferase hexapeptide (six repeats) AhaeAN54_005495 PF01272 Transcription elongation factor, GreA/GreB, C-term AhaeAN54_005495 PF03449 Transcription elongation factor, N-terminal AhaeAN54_005500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AhaeAN54_005500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AhaeAN54_005500 PF02142 MGS-like domain AhaeAN54_005505 PF00117 Glutamine amidotransferase class-I AhaeAN54_005505 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AhaeAN54_005520 PF01985 CRS1 / YhbY (CRM) domain AhaeAN54_005525 PF01728 FtsJ-like methyltransferase AhaeAN54_005530 PF00004 ATPase family associated with various cellular activities (AAA) AhaeAN54_005530 PF01434 Peptidase family M41 AhaeAN54_005530 PF06480 FtsH Extracellular AhaeAN54_005530 PF17862 AAA+ lid domain AhaeAN54_005535 PF00809 Pterin binding enzyme AhaeAN54_005545 PF12450 von Willebrand factor AhaeAN54_005545 PF12034 Domain of unknown function (DUF3520) AhaeAN54_005545 PF00092 von Willebrand factor type A domain AhaeAN54_005575 PF04973 Nicotinamide mononucleotide transporter AhaeAN54_005580 PF03009 Glycerophosphoryl diester phosphodiesterase family AhaeAN54_005585 PF00884 Sulfatase AhaeAN54_005590 PF00873 AcrB/AcrD/AcrF family AhaeAN54_005595 PF01769 Divalent cation transporter AhaeAN54_005595 PF00571 CBS domain AhaeAN54_005595 PF03448 MgtE intracellular N domain AhaeAN54_005605 PF01435 Peptidase family M48 AhaeAN54_005610 PF10145 Phage-related minor tail protein AhaeAN54_005610 PF01551 Peptidase family M23 AhaeAN54_005610 PF01464 Transglycosylase SLT domain AhaeAN54_005615 PF01171 PP-loop family AhaeAN54_005625 PF00497 Bacterial extracellular solute-binding proteins, family 3 AhaeAN54_005625 PF01464 Transglycosylase SLT domain AhaeAN54_005640 PF00375 Sodium:dicarboxylate symporter family AhaeAN54_005645 PF03466 LysR substrate binding domain AhaeAN54_005645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_005650 PF00206 Lyase AhaeAN54_005650 PF10415 Fumarase C C-terminus AhaeAN54_005670 PF13488 Glycine zipper AhaeAN54_005670 PF00691 OmpA family AhaeAN54_005685 PF13340 Putative transposase of IS4/5 family (DUF4096) AhaeAN54_005695 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AhaeAN54_005695 PF12833 Helix-turn-helix domain AhaeAN54_005700 PF00171 Aldehyde dehydrogenase family AhaeAN54_005705 PF05199 GMC oxidoreductase AhaeAN54_005710 PF13340 Putative transposase of IS4/5 family (DUF4096) AhaeAN54_005730 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_005735 PF00005 ABC transporter AhaeAN54_005735 PF03459 TOBE domain AhaeAN54_005745 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AhaeAN54_005750 PF00005 ABC transporter AhaeAN54_005755 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_005760 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AhaeAN54_005775 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal AhaeAN54_005775 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal AhaeAN54_005780 PF04030 D-arabinono-1,4-lactone oxidase AhaeAN54_005780 PF01565 FAD binding domain AhaeAN54_005790 PF00582 Universal stress protein family AhaeAN54_005805 PF01327 Polypeptide deformylase AhaeAN54_005845 PF01384 Phosphate transporter family AhaeAN54_005855 PF18073 Rubredoxin metal binding domain AhaeAN54_005860 PF01235 Sodium:alanine symporter family AhaeAN54_005870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AhaeAN54_005870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AhaeAN54_005875 PF01678 Diaminopimelate epimerase AhaeAN54_005880 PF00561 alpha/beta hydrolase fold AhaeAN54_005885 PF01810 LysE type translocator AhaeAN54_005890 PF02899 Phage integrase, N-terminal SAM-like domain AhaeAN54_005890 PF00589 Phage integrase family AhaeAN54_005895 PF01012 Electron transfer flavoprotein domain AhaeAN54_005900 PF01012 Electron transfer flavoprotein domain AhaeAN54_005900 PF00766 Electron transfer flavoprotein FAD-binding domain AhaeAN54_005915 PF03989 DNA gyrase C-terminal domain, beta-propeller AhaeAN54_005915 PF00521 DNA gyrase/topoisomerase IV, subunit A AhaeAN54_005930 PF13533 Biotin-lipoyl like AhaeAN54_005940 PF00266 Aminotransferase class-V AhaeAN54_005950 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AhaeAN54_005975 PF12704 MacB-like periplasmic core domain AhaeAN54_005975 PF02687 FtsX-like permease family AhaeAN54_005980 PF00005 ABC transporter AhaeAN54_005985 PF13567 Domain of unknown function (DUF4131) AhaeAN54_005985 PF03772 Competence protein AhaeAN54_005985 PF00753 Metallo-beta-lactamase superfamily AhaeAN54_005995 PF06965 Na+/H+ antiporter 1 AhaeAN54_005995 PF01343 Peptidase family S49 AhaeAN54_006005 PF00551 Formyl transferase AhaeAN54_006010 PF02769 AIR synthase related protein, C-terminal domain AhaeAN54_006010 PF00586 AIR synthase related protein, N-terminal domain AhaeAN54_006015 PF01594 AI-2E family transporter AhaeAN54_006020 PF08299 Bacterial dnaA protein helix-turn-helix AhaeAN54_006020 PF11638 DnaA N-terminal domain AhaeAN54_006020 PF00308 Bacterial dnaA protein AhaeAN54_006055 PF00588 SpoU rRNA Methylase family AhaeAN54_006055 PF08032 RNA 2'-O ribose methyltransferase substrate binding AhaeAN54_006060 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AhaeAN54_006070 PF00691 OmpA family AhaeAN54_006075 PF07676 WD40-like Beta Propeller Repeat AhaeAN54_006075 PF04052 TolB amino-terminal domain AhaeAN54_006085 PF02472 Biopolymer transport protein ExbD/TolR AhaeAN54_006090 PF01618 MotA/TolQ/ExbB proton channel family AhaeAN54_006095 PF03061 Thioesterase superfamily AhaeAN54_006105 PF17864 RuvB AAA lid domain AhaeAN54_006105 PF05491 RuvB C-terminal winged helix domain AhaeAN54_006105 PF05496 Holliday junction DNA helicase RuvB P-loop domain AhaeAN54_006110 PF01330 RuvA N terminal domain AhaeAN54_006110 PF07499 RuvA, C-terminal domain AhaeAN54_006120 PF01966 HD domain AhaeAN54_006125 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AhaeAN54_006125 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AhaeAN54_006125 PF02769 AIR synthase related protein, C-terminal domain AhaeAN54_006140 PF01784 NIF3 (NGG1p interacting factor 3) AhaeAN54_006145 PF00881 Nitroreductase family AhaeAN54_006155 PF02378 Phosphotransferase system, EIIC AhaeAN54_006155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AhaeAN54_006160 PF00294 pfkB family carbohydrate kinase AhaeAN54_006165 PF00391 PEP-utilising enzyme, mobile domain AhaeAN54_006165 PF02896 PEP-utilising enzyme, TIM barrel domain AhaeAN54_006165 PF05524 PEP-utilising enzyme, N-terminal AhaeAN54_006165 PF00381 PTS HPr component phosphorylation site AhaeAN54_006165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AhaeAN54_006170 PF00378 Enoyl-CoA hydratase/isomerase AhaeAN54_006175 PF00293 NUDIX domain AhaeAN54_006175 PF01467 Cytidylyltransferase-like AhaeAN54_006180 PF03466 LysR substrate binding domain AhaeAN54_006180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_006185 PF01361 Tautomerase enzyme AhaeAN54_006205 PF00578 AhpC/TSA family AhaeAN54_006220 PF06508 Queuosine biosynthesis protein QueC AhaeAN54_006225 PF04055 Radical SAM superfamily AhaeAN54_006230 PF14602 Hexapeptide repeat of succinyl-transferase AhaeAN54_006230 PF00132 Bacterial transferase hexapeptide (six repeats) AhaeAN54_006230 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AhaeAN54_006240 PF03466 LysR substrate binding domain AhaeAN54_006240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_006245 PF00005 ABC transporter AhaeAN54_006245 PF12857 TOBE-like domain AhaeAN54_006250 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_006255 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_006270 PF01063 Amino-transferase class IV AhaeAN54_006275 PF02618 YceG-like family AhaeAN54_006280 PF02223 Thymidylate kinase AhaeAN54_006295 PF13737 Transposase DDE domain AhaeAN54_006305 PF13936 Helix-turn-helix domain AhaeAN54_006305 PF00665 Integrase core domain AhaeAN54_006310 PF00665 Integrase core domain AhaeAN54_006310 PF13936 Helix-turn-helix domain AhaeAN54_006325 PF02910 Fumarate reductase flavoprotein C-term AhaeAN54_006325 PF00890 FAD binding domain AhaeAN54_006335 PF13180 PDZ domain AhaeAN54_006345 PF00679 Elongation factor G C-terminus AhaeAN54_006345 PF06421 GTP-binding protein LepA C-terminus AhaeAN54_006345 PF00009 Elongation factor Tu GTP binding domain AhaeAN54_006345 PF03144 Elongation factor Tu domain 2 AhaeAN54_006350 PF10502 Signal peptidase, peptidase S26 AhaeAN54_006360 PF00035 Double-stranded RNA binding motif AhaeAN54_006360 PF14622 Ribonuclease-III-like AhaeAN54_006365 PF07650 KH domain AhaeAN54_006365 PF01926 50S ribosome-binding GTPase AhaeAN54_006375 PF02565 Recombination protein O C terminal AhaeAN54_006375 PF11967 Recombination protein O N terminal AhaeAN54_006380 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AhaeAN54_006385 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AhaeAN54_006430 PF00082 Subtilase family AhaeAN54_006430 PF05922 Peptidase inhibitor I9 AhaeAN54_006435 PF17757 UvrB interaction domain AhaeAN54_006435 PF12344 Ultra-violet resistance protein B AhaeAN54_006435 PF00271 Helicase conserved C-terminal domain AhaeAN54_006435 PF02151 UvrB/uvrC motif AhaeAN54_006435 PF04851 Type III restriction enzyme, res subunit AhaeAN54_006450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AhaeAN54_006450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AhaeAN54_006465 PF01926 50S ribosome-binding GTPase AhaeAN54_006465 PF01018 GTP1/OBG AhaeAN54_006470 PF00696 Amino acid kinase family AhaeAN54_006470 PF01472 PUA domain AhaeAN54_006485 PF08402 TOBE domain AhaeAN54_006485 PF00005 ABC transporter AhaeAN54_006495 PF07759 Protein of unknown function (DUF1615) AhaeAN54_006500 PF01207 Dihydrouridine synthase (Dus) AhaeAN54_006505 PF03466 LysR substrate binding domain AhaeAN54_006505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_006510 PF12697 Alpha/beta hydrolase family AhaeAN54_006515 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_006515 PF18113 Rubredoxin binding C-terminal domain AhaeAN54_006520 PF00301 Rubredoxin AhaeAN54_006530 PF01336 OB-fold nucleic acid binding domain AhaeAN54_006530 PF00152 tRNA synthetases class II (D, K and N) AhaeAN54_006535 PF14052 Capsule assembly protein Wzi AhaeAN54_006540 PF01507 Phosphoadenosine phosphosulfate reductase family AhaeAN54_006545 PF00009 Elongation factor Tu GTP binding domain AhaeAN54_006555 PF00542 Ribosomal protein L7/L12 C-terminal domain AhaeAN54_006555 PF16320 Ribosomal protein L7/L12 dimerisation domain AhaeAN54_006560 PF03471 Transporter associated domain AhaeAN54_006560 PF00571 CBS domain AhaeAN54_006560 PF01595 Cyclin M transmembrane N-terminal domain AhaeAN54_006565 PF03466 LysR substrate binding domain AhaeAN54_006565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_006575 PF00463 Isocitrate lyase family AhaeAN54_006580 PF17185 NlpE C-terminal OB domain AhaeAN54_006580 PF04170 NlpE N-terminal domain AhaeAN54_006595 PF01406 tRNA synthetases class I (C) catalytic domain AhaeAN54_006595 PF09190 DALR domain AhaeAN54_006600 PF01380 SIS domain AhaeAN54_006600 PF00571 CBS domain AhaeAN54_006615 PF03968 OstA-like protein AhaeAN54_006620 PF12399 Branched-chain amino acid ATP-binding cassette transporter AhaeAN54_006620 PF00005 ABC transporter AhaeAN54_006640 PF01205 Uncharacterized protein family UPF0029 AhaeAN54_006645 PF00132 Bacterial transferase hexapeptide (six repeats) AhaeAN54_006655 PF01596 O-methyltransferase AhaeAN54_006660 PF00665 Integrase core domain AhaeAN54_006660 PF13936 Helix-turn-helix domain AhaeAN54_006670 PF00037 4Fe-4S binding domain AhaeAN54_006670 PF11953 Domain of unknown function (DUF3470) AhaeAN54_006680 PF00488 MutS domain V AhaeAN54_006680 PF05190 MutS family domain IV AhaeAN54_006680 PF05192 MutS domain III AhaeAN54_006680 PF05188 MutS domain II AhaeAN54_006680 PF01624 MutS domain I AhaeAN54_006690 PF13737 Transposase DDE domain AhaeAN54_006710 PF00717 Peptidase S24-like AhaeAN54_006715 PF13438 Domain of unknown function (DUF4113) AhaeAN54_006715 PF00817 impB/mucB/samB family AhaeAN54_006715 PF11799 impB/mucB/samB family C-terminal domain AhaeAN54_006720 PF12706 Beta-lactamase superfamily domain AhaeAN54_006730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AhaeAN54_006730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AhaeAN54_006735 PF01553 Acyltransferase AhaeAN54_006740 PF01435 Peptidase family M48 AhaeAN54_006760 PF09424 Yqey-like protein AhaeAN54_006765 PF01165 Ribosomal protein S21 AhaeAN54_006770 PF00814 Glycoprotease family AhaeAN54_006780 PF01527 Transposase AhaeAN54_006785 PF13333 Integrase core domain AhaeAN54_006785 PF00665 Integrase core domain AhaeAN54_006785 PF13276 HTH-like domain AhaeAN54_006815 PF00892 EamA-like transporter family AhaeAN54_006840 PF03793 PASTA domain AhaeAN54_006840 PF00069 Protein kinase domain AhaeAN54_006855 PF00171 Aldehyde dehydrogenase family AhaeAN54_006860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AhaeAN54_006860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AhaeAN54_006860 PF00205 Thiamine pyrophosphate enzyme, central domain AhaeAN54_006870 PF00206 Lyase AhaeAN54_006870 PF08328 Adenylosuccinate lyase C-terminal AhaeAN54_006875 PF04356 Protein of unknown function (DUF489) AhaeAN54_006885 PF00293 NUDIX domain AhaeAN54_006900 PF00132 Bacterial transferase hexapeptide (six repeats) AhaeAN54_006905 PF00768 D-alanyl-D-alanine carboxypeptidase AhaeAN54_006905 PF07943 Penicillin-binding protein 5, C-terminal domain AhaeAN54_006925 PF01975 Survival protein SurE AhaeAN54_006930 PF01476 LysM domain AhaeAN54_006930 PF01551 Peptidase family M23 AhaeAN54_006935 PF03466 LysR substrate binding domain AhaeAN54_006935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_006940 PF05362 Lon protease (S16) C-terminal proteolytic domain AhaeAN54_006940 PF13654 AAA domain AhaeAN54_006945 PF07690 Major Facilitator Superfamily AhaeAN54_006950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AhaeAN54_006955 PF13593 SBF-like CPA transporter family (DUF4137) AhaeAN54_006960 PF01197 Ribosomal protein L31 AhaeAN54_006975 PF04055 Radical SAM superfamily AhaeAN54_006980 PF01132 Elongation factor P (EF-P) OB domain AhaeAN54_006980 PF08207 Elongation factor P (EF-P) KOW-like domain AhaeAN54_006980 PF09285 Elongation factor P, C-terminal AhaeAN54_006985 PF13722 5TM C-terminal transporter carbon starvation CstA AhaeAN54_006985 PF02554 Carbon starvation protein CstA AhaeAN54_006990 PF04328 Selenoprotein, putative AhaeAN54_006995 PF07726 ATPase family associated with various cellular activities (AAA) AhaeAN54_006995 PF17863 AAA lid domain AhaeAN54_007005 PF11992 Domain of unknown function (DUF3488) AhaeAN54_007005 PF01841 Transglutaminase-like superfamily AhaeAN54_007005 PF13559 Domain of unknown function (DUF4129) AhaeAN54_007015 PF00589 Phage integrase family AhaeAN54_007255 PF13737 Transposase DDE domain AhaeAN54_007275 PF03466 LysR substrate binding domain AhaeAN54_007275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_007280 PF01590 GAF domain AhaeAN54_007280 PF00158 Sigma-54 interaction domain AhaeAN54_007290 PF00795 Carbon-nitrogen hydrolase AhaeAN54_007305 PF00586 AIR synthase related protein, N-terminal domain AhaeAN54_007305 PF02769 AIR synthase related protein, C-terminal domain AhaeAN54_007325 PF13356 Arm DNA-binding domain AhaeAN54_007325 PF00589 Phage integrase family AhaeAN54_007340 PF13438 Domain of unknown function (DUF4113) AhaeAN54_007340 PF00817 impB/mucB/samB family AhaeAN54_007340 PF11799 impB/mucB/samB family C-terminal domain AhaeAN54_007340 PF11798 IMS family HHH motif AhaeAN54_007345 PF00717 Peptidase S24-like AhaeAN54_007360 PF01381 Helix-turn-helix AhaeAN54_007365 PF02384 N-6 DNA Methylase AhaeAN54_007365 PF12161 HsdM N-terminal domain AhaeAN54_007370 PF01420 Type I restriction modification DNA specificity domain AhaeAN54_007385 PF04851 Type III restriction enzyme, res subunit AhaeAN54_007385 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AhaeAN54_007385 PF00271 Helicase conserved C-terminal domain AhaeAN54_007385 PF08463 EcoEI R protein C-terminal AhaeAN54_007395 PF00580 UvrD/REP helicase N-terminal domain AhaeAN54_007395 PF12705 PD-(D/E)XK nuclease superfamily AhaeAN54_007395 PF13361 UvrD-like helicase C-terminal domain AhaeAN54_007425 PF02560 Cyanate lyase C-terminal domain AhaeAN54_007430 PF01226 Formate/nitrite transporter AhaeAN54_007435 PF00069 Protein kinase domain AhaeAN54_007460 PF17954 Quercetinase C-terminal cupin domain AhaeAN54_007460 PF02678 Pirin AhaeAN54_007465 PF00764 Arginosuccinate synthase AhaeAN54_007475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_007475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AhaeAN54_007485 PF00589 Phage integrase family AhaeAN54_007485 PF13356 Arm DNA-binding domain AhaeAN54_007535 PF06865 Pyrimidine/purine nucleoside phosphorylase AhaeAN54_007625 PF01545 Cation efflux family AhaeAN54_007630 PF02583 Metal-sensitive transcriptional repressor AhaeAN54_007635 PF02417 Chromate transporter AhaeAN54_007640 PF09828 Chromate resistance exported protein AhaeAN54_007655 PF00529 HlyD membrane-fusion protein of T1SS AhaeAN54_007655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_007660 PF00873 AcrB/AcrD/AcrF family AhaeAN54_007685 PF07690 Major Facilitator Superfamily AhaeAN54_007690 PF09335 SNARE associated Golgi protein AhaeAN54_007715 PF17761 DUF1016 N-terminal domain AhaeAN54_007715 PF06250 YhcG PDDEXK nuclease domain AhaeAN54_007720 PF03466 LysR substrate binding domain AhaeAN54_007720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_007725 PF07883 Cupin domain AhaeAN54_007730 PF13417 Glutathione S-transferase, N-terminal domain AhaeAN54_007735 PF01557 Fumarylacetoacetate (FAA) hydrolase family AhaeAN54_007740 PF07690 Major Facilitator Superfamily AhaeAN54_007755 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_007755 PF08521 Two-component sensor kinase N-terminal AhaeAN54_007755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_007760 PF00072 Response regulator receiver domain AhaeAN54_007760 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_007780 PF08534 Redoxin AhaeAN54_007785 PF00158 Sigma-54 interaction domain AhaeAN54_007785 PF13185 GAF domain AhaeAN54_007785 PF02954 Bacterial regulatory protein, Fis family AhaeAN54_007790 PF00753 Metallo-beta-lactamase superfamily AhaeAN54_007800 PF01925 Sulfite exporter TauE/SafE AhaeAN54_007820 PF01979 Amidohydrolase family AhaeAN54_007830 PF01502 Phosphoribosyl-AMP cyclohydrolase AhaeAN54_007835 PF02649 Type I GTP cyclohydrolase folE2 AhaeAN54_007850 PF07683 Cobalamin synthesis protein cobW C-terminal domain AhaeAN54_007850 PF02492 CobW/HypB/UreG, nucleotide-binding domain AhaeAN54_007855 PF09339 IclR helix-turn-helix domain AhaeAN54_007855 PF01614 Bacterial transcriptional regulator AhaeAN54_007860 PF01144 Coenzyme A transferase AhaeAN54_007865 PF01144 Coenzyme A transferase AhaeAN54_007870 PF00108 Thiolase, N-terminal domain AhaeAN54_007870 PF02803 Thiolase, C-terminal domain AhaeAN54_007875 PF10397 Adenylosuccinate lyase C-terminus AhaeAN54_007875 PF00206 Lyase AhaeAN54_007880 PF00561 alpha/beta hydrolase fold AhaeAN54_007885 PF07690 Major Facilitator Superfamily AhaeAN54_007890 PF02627 Carboxymuconolactone decarboxylase family AhaeAN54_007895 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AhaeAN54_007895 PF00775 Dioxygenase AhaeAN54_007900 PF00775 Dioxygenase AhaeAN54_007905 PF01487 Type I 3-dehydroquinase AhaeAN54_007925 PF04966 Carbohydrate-selective porin, OprB family AhaeAN54_007950 PF00576 HIUase/Transthyretin family AhaeAN54_007955 PF00860 Permease family AhaeAN54_007975 PF01494 FAD binding domain AhaeAN54_007980 PF07729 FCD domain AhaeAN54_007980 PF00392 Bacterial regulatory proteins, gntR family AhaeAN54_007985 PF03561 Allantoicase repeat AhaeAN54_007990 PF04115 Ureidoglycolate lyase AhaeAN54_008005 PF13737 Transposase DDE domain AhaeAN54_008010 PF09084 NMT1/THI5 like AhaeAN54_008015 PF00005 ABC transporter AhaeAN54_008020 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_008025 PF01979 Amidohydrolase family AhaeAN54_008035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_008035 PF03466 LysR substrate binding domain AhaeAN54_008040 PF00355 Rieske [2Fe-2S] domain AhaeAN54_008045 PF07702 UTRA domain AhaeAN54_008045 PF00392 Bacterial regulatory proteins, gntR family AhaeAN54_008050 PF01175 Urocanase Rossmann-like domain AhaeAN54_008050 PF17392 Urocanase C-terminal domain AhaeAN54_008050 PF17391 Urocanase N-terminal domain AhaeAN54_008055 PF00221 Aromatic amino acid lyase AhaeAN54_008060 PF01979 Amidohydrolase family AhaeAN54_008065 PF00491 Arginase family AhaeAN54_008070 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AhaeAN54_008070 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AhaeAN54_008075 PF00392 Bacterial regulatory proteins, gntR family AhaeAN54_008075 PF00155 Aminotransferase class I and II AhaeAN54_008120 PF00384 Molybdopterin oxidoreductase AhaeAN54_008125 PF02634 FdhD/NarQ family AhaeAN54_008130 PF04261 Dyp-type peroxidase family AhaeAN54_008140 PF02321 Outer membrane efflux protein AhaeAN54_008145 PF00873 AcrB/AcrD/AcrF family AhaeAN54_008150 PF00529 HlyD membrane-fusion protein of T1SS AhaeAN54_008150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_008155 PF00072 Response regulator receiver domain AhaeAN54_008155 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_008160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_008160 PF00672 HAMP domain AhaeAN54_008160 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_008165 PF08212 Lipocalin-like domain AhaeAN54_008200 PF08521 Two-component sensor kinase N-terminal AhaeAN54_008200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_008200 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_008205 PF00072 Response regulator receiver domain AhaeAN54_008205 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_008220 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_008220 PF17932 Tetracyclin repressor-like, C-terminal domain AhaeAN54_008235 PF00106 short chain dehydrogenase AhaeAN54_008240 PF00743 Flavin-binding monooxygenase-like AhaeAN54_008245 PF04072 Leucine carboxyl methyltransferase AhaeAN54_008250 PF03279 Bacterial lipid A biosynthesis acyltransferase AhaeAN54_008255 PF03746 LamB/YcsF family AhaeAN54_008260 PF02682 Carboxyltransferase domain, subdomain C and D AhaeAN54_008265 PF02785 Biotin carboxylase C-terminal domain AhaeAN54_008265 PF00289 Biotin carboxylase, N-terminal domain AhaeAN54_008265 PF00364 Biotin-requiring enzyme AhaeAN54_008265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AhaeAN54_008270 PF01435 Peptidase family M48 AhaeAN54_008275 PF00027 Cyclic nucleotide-binding domain AhaeAN54_008275 PF13545 Crp-like helix-turn-helix domain AhaeAN54_008280 PF02566 OsmC-like protein AhaeAN54_008290 PF07724 AAA domain (Cdc48 subfamily) AhaeAN54_008290 PF17871 AAA lid domain AhaeAN54_008290 PF10431 C-terminal, D2-small domain, of ClpB protein AhaeAN54_008290 PF00004 ATPase family associated with various cellular activities (AAA) AhaeAN54_008290 PF02861 Clp amino terminal domain, pathogenicity island component AhaeAN54_008300 PF02926 THUMP domain AhaeAN54_008300 PF01170 Putative RNA methylase family UPF0020 AhaeAN54_008300 PF10672 S-adenosylmethionine-dependent methyltransferase AhaeAN54_008310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AhaeAN54_008310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AhaeAN54_008315 PF01979 Amidohydrolase family AhaeAN54_008330 PF00005 ABC transporter AhaeAN54_008335 PF02110 Hydroxyethylthiazole kinase family AhaeAN54_008360 PF01433 Peptidase family M1 domain AhaeAN54_008360 PF11940 Domain of unknown function (DUF3458) Ig-like fold AhaeAN54_008360 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AhaeAN54_008365 PF03313 Serine dehydratase alpha chain AhaeAN54_008365 PF03315 Serine dehydratase beta chain AhaeAN54_008385 PF06271 RDD family AhaeAN54_008390 PF02308 MgtC family AhaeAN54_008395 PF02254 TrkA-N domain AhaeAN54_008395 PF00999 Sodium/hydrogen exchanger family AhaeAN54_008400 PF03594 Benzoate membrane transport protein AhaeAN54_008405 PF01810 LysE type translocator AhaeAN54_008415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_008415 PF03466 LysR substrate binding domain AhaeAN54_008435 PF02559 CarD-like/TRCF domain AhaeAN54_008435 PF17757 UvrB interaction domain AhaeAN54_008435 PF03461 TRCF domain AhaeAN54_008435 PF00271 Helicase conserved C-terminal domain AhaeAN54_008435 PF00270 DEAD/DEAH box helicase AhaeAN54_008445 PF00211 Adenylate and Guanylate cyclase catalytic domain AhaeAN54_008450 PF00111 2Fe-2S iron-sulfur cluster binding domain AhaeAN54_008455 PF00012 Hsp70 protein AhaeAN54_008460 PF00226 DnaJ domain AhaeAN54_008460 PF07743 HSCB C-terminal oligomerisation domain AhaeAN54_008465 PF01521 Iron-sulphur cluster biosynthesis AhaeAN54_008470 PF01592 NifU-like N terminal domain AhaeAN54_008475 PF00266 Aminotransferase class-V AhaeAN54_008480 PF02082 Transcriptional regulator AhaeAN54_008495 PF00216 Bacterial DNA-binding protein AhaeAN54_008520 PF02631 RecX family AhaeAN54_008525 PF00154 recA bacterial DNA recombination protein AhaeAN54_008530 PF01479 S4 domain AhaeAN54_008535 PF13419 Haloacid dehalogenase-like hydrolase AhaeAN54_008540 PF00459 Inositol monophosphatase family AhaeAN54_008550 PF00041 Fibronectin type III domain AhaeAN54_008550 PF12561 ToxR activated gene A lipoprotein domain AhaeAN54_008560 PF01649 Ribosomal protein S20 AhaeAN54_008565 PF13460 NAD(P)H-binding AhaeAN54_008570 PF03737 Aldolase/RraA AhaeAN54_008590 PF02803 Thiolase, C-terminal domain AhaeAN54_008590 PF00108 Thiolase, N-terminal domain AhaeAN54_008640 PF07690 Major Facilitator Superfamily AhaeAN54_008645 PF02525 Flavodoxin-like fold AhaeAN54_008650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_008650 PF03466 LysR substrate binding domain AhaeAN54_008655 PF02545 Maf-like protein AhaeAN54_008665 PF00162 Phosphoglycerate kinase AhaeAN54_008685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AhaeAN54_008685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AhaeAN54_008705 PF01180 Dihydroorotate dehydrogenase AhaeAN54_008710 PF02674 Colicin V production protein AhaeAN54_008715 PF00156 Phosphoribosyl transferase domain AhaeAN54_008745 PF05816 Toxic anion resistance protein (TelA) AhaeAN54_008755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_008755 PF13192 Thioredoxin domain AhaeAN54_008760 PF13333 Integrase core domain AhaeAN54_008760 PF00665 Integrase core domain AhaeAN54_008760 PF13276 HTH-like domain AhaeAN54_008790 PF00132 Bacterial transferase hexapeptide (six repeats) AhaeAN54_008795 PF00588 SpoU rRNA Methylase family AhaeAN54_008800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AhaeAN54_008800 PF14579 Helix-hairpin-helix motif AhaeAN54_008800 PF07733 Bacterial DNA polymerase III alpha NTPase domain AhaeAN54_008800 PF01336 OB-fold nucleic acid binding domain AhaeAN54_008800 PF02811 PHP domain AhaeAN54_008810 PF00155 Aminotransferase class I and II AhaeAN54_008815 PF01641 SelR domain AhaeAN54_008820 PF00255 Glutathione peroxidase AhaeAN54_008825 PF00873 AcrB/AcrD/AcrF family AhaeAN54_008830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_008845 PF13737 Transposase DDE domain AhaeAN54_008855 PF01037 Lrp/AsnC ligand binding domain AhaeAN54_008865 PF00155 Aminotransferase class I and II AhaeAN54_008870 PF01966 HD domain AhaeAN54_008870 PF01909 Nucleotidyltransferase domain AhaeAN54_008870 PF08335 GlnD PII-uridylyltransferase AhaeAN54_008875 PF02222 ATP-grasp domain AhaeAN54_008890 PF01595 Cyclin M transmembrane N-terminal domain AhaeAN54_008890 PF00571 CBS domain AhaeAN54_008895 PF13545 Crp-like helix-turn-helix domain AhaeAN54_008895 PF00027 Cyclic nucleotide-binding domain AhaeAN54_008905 PF06071 Protein of unknown function (DUF933) AhaeAN54_008905 PF01926 50S ribosome-binding GTPase AhaeAN54_008910 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_008915 PF00005 ABC transporter AhaeAN54_008915 PF09383 NIL domain AhaeAN54_008920 PF03180 NLPA lipoprotein AhaeAN54_008925 PF00296 Luciferase-like monooxygenase AhaeAN54_008935 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_008935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_008950 PF07687 Peptidase dimerisation domain AhaeAN54_008950 PF01546 Peptidase family M20/M25/M40 AhaeAN54_008960 PF07804 HipA-like C-terminal domain AhaeAN54_008975 PF03883 Peroxide stress protein YaaA AhaeAN54_009000 PF05690 Thiazole biosynthesis protein ThiG AhaeAN54_009010 PF04241 Protein of unknown function (DUF423) AhaeAN54_009015 PF00140 Sigma-70 factor, region 1.2 AhaeAN54_009015 PF04542 Sigma-70 region 2 AhaeAN54_009015 PF04545 Sigma-70, region 4 AhaeAN54_009025 PF00313 'Cold-shock' DNA-binding domain AhaeAN54_009030 PF00271 Helicase conserved C-terminal domain AhaeAN54_009030 PF00270 DEAD/DEAH box helicase AhaeAN54_009035 PF01116 Fructose-bisphosphate aldolase class-II AhaeAN54_009040 PF09312 SurA N-terminal domain AhaeAN54_009040 PF00639 PPIC-type PPIASE domain AhaeAN54_009045 PF03968 OstA-like protein AhaeAN54_009045 PF04453 LPS transport system D AhaeAN54_009050 PF01636 Phosphotransferase enzyme family AhaeAN54_009055 PF00483 Nucleotidyl transferase AhaeAN54_009060 PF02527 rRNA small subunit methyltransferase G AhaeAN54_009065 PF13614 AAA domain AhaeAN54_009070 PF02195 ParB-like nuclease domain AhaeAN54_009070 PF17762 HTH domain found in ParB protein AhaeAN54_009075 PF01618 MotA/TolQ/ExbB proton channel family AhaeAN54_009085 PF00005 ABC transporter AhaeAN54_009085 PF00664 ABC transporter transmembrane region AhaeAN54_009090 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AhaeAN54_009095 PF02348 Cytidylyltransferase AhaeAN54_009100 PF09115 DNA polymerase III, delta subunit, C terminal AhaeAN54_009115 PF01026 TatD related DNase AhaeAN54_009130 PF02501 Type II secretion system (T2SS), protein I AhaeAN54_009130 PF07963 Prokaryotic N-terminal methylation motif AhaeAN54_009135 PF07963 Prokaryotic N-terminal methylation motif AhaeAN54_009135 PF11612 Type II secretion system (T2SS), protein J AhaeAN54_009140 PF03934 Type II secretion system (T2SS), protein K AhaeAN54_009150 PF03167 Uracil DNA glycosylase superfamily AhaeAN54_009160 PF14437 MafB19-like deaminase AhaeAN54_009170 PF02224 Cytidylate kinase AhaeAN54_009175 PF00575 S1 RNA binding domain AhaeAN54_009180 PF00216 Bacterial DNA-binding protein AhaeAN54_009190 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AhaeAN54_009195 PF03956 Lysine exporter LysO AhaeAN54_009200 PF00743 Flavin-binding monooxygenase-like AhaeAN54_009210 PF03969 AFG1-like ATPase AhaeAN54_009215 PF01274 Malate synthase AhaeAN54_009250 PF05525 Branched-chain amino acid transport protein AhaeAN54_009255 PF00557 Metallopeptidase family M24 AhaeAN54_009260 PF03466 LysR substrate binding domain AhaeAN54_009260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_009270 PF00462 Glutaredoxin AhaeAN54_009275 PF00202 Aminotransferase class-III AhaeAN54_009285 PF00571 CBS domain AhaeAN54_009285 PF01380 SIS domain AhaeAN54_009310 PF02881 SRP54-type protein, helical bundle domain AhaeAN54_009310 PF00448 SRP54-type protein, GTPase domain AhaeAN54_009340 PF08173 Membrane bound YbgT-like protein AhaeAN54_009345 PF02322 Cytochrome bd terminal oxidase subunit II AhaeAN54_009350 PF01654 Cytochrome bd terminal oxidase subunit I AhaeAN54_009370 PF00294 pfkB family carbohydrate kinase AhaeAN54_009375 PF08367 Peptidase M16C associated AhaeAN54_009375 PF05193 Peptidase M16 inactive domain AhaeAN54_009375 PF00675 Insulinase (Peptidase family M16) AhaeAN54_009380 PF02253 Phospholipase A1 AhaeAN54_009390 PF02386 Cation transport protein AhaeAN54_009395 PF02080 TrkA-C domain AhaeAN54_009395 PF02254 TrkA-N domain AhaeAN54_009400 PF00585 C-terminal regulatory domain of Threonine dehydratase AhaeAN54_009400 PF00291 Pyridoxal-phosphate dependent enzyme AhaeAN54_009405 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AhaeAN54_009420 PF00245 Alkaline phosphatase AhaeAN54_009430 PF01118 Semialdehyde dehydrogenase, NAD binding domain AhaeAN54_009430 PF02774 Semialdehyde dehydrogenase, dimerisation domain AhaeAN54_009440 PF02617 ATP-dependent Clp protease adaptor protein ClpS AhaeAN54_009450 PF02617 ATP-dependent Clp protease adaptor protein ClpS AhaeAN54_009455 PF00004 ATPase family associated with various cellular activities (AAA) AhaeAN54_009455 PF07724 AAA domain (Cdc48 subfamily) AhaeAN54_009455 PF17871 AAA lid domain AhaeAN54_009455 PF02861 Clp amino terminal domain, pathogenicity island component AhaeAN54_009455 PF10431 C-terminal, D2-small domain, of ClpB protein AhaeAN54_009460 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AhaeAN54_009465 PF00793 DAHP synthetase I family AhaeAN54_009470 PF12697 Alpha/beta hydrolase family AhaeAN54_009480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AhaeAN54_009480 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_009505 PF00117 Glutamine amidotransferase class-I AhaeAN54_009505 PF06418 CTP synthase N-terminus AhaeAN54_009510 PF00793 DAHP synthetase I family AhaeAN54_009515 PF00113 Enolase, C-terminal TIM barrel domain AhaeAN54_009515 PF03952 Enolase, N-terminal domain AhaeAN54_009520 PF04977 Septum formation initiator AhaeAN54_009525 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AhaeAN54_009545 PF04143 Sulphur transport AhaeAN54_009555 PF00753 Metallo-beta-lactamase superfamily AhaeAN54_009575 PF13091 PLD-like domain AhaeAN54_009580 PF02583 Metal-sensitive transcriptional repressor AhaeAN54_009585 PF08240 Alcohol dehydrogenase GroES-like domain AhaeAN54_009585 PF00107 Zinc-binding dehydrogenase AhaeAN54_009590 PF01425 Amidase AhaeAN54_009595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AhaeAN54_009595 PF00289 Biotin carboxylase, N-terminal domain AhaeAN54_009595 PF02785 Biotin carboxylase C-terminal domain AhaeAN54_009595 PF00364 Biotin-requiring enzyme AhaeAN54_009600 PF00392 Bacterial regulatory proteins, gntR family AhaeAN54_009600 PF07729 FCD domain AhaeAN54_009610 PF12833 Helix-turn-helix domain AhaeAN54_009610 PF06719 AraC-type transcriptional regulator N-terminus AhaeAN54_009615 PF00107 Zinc-binding dehydrogenase AhaeAN54_009615 PF08240 Alcohol dehydrogenase GroES-like domain AhaeAN54_009620 PF01965 DJ-1/PfpI family AhaeAN54_009625 PF08546 Ketopantoate reductase PanE/ApbA C terminal AhaeAN54_009625 PF02558 Ketopantoate reductase PanE/ApbA AhaeAN54_009635 PF13737 Transposase DDE domain AhaeAN54_009645 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AhaeAN54_009645 PF18381 YcaO cyclodehydratase C-terminal domain AhaeAN54_009655 PF00106 short chain dehydrogenase AhaeAN54_009665 PF01037 Lrp/AsnC ligand binding domain AhaeAN54_009680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AhaeAN54_009680 PF02785 Biotin carboxylase C-terminal domain AhaeAN54_009680 PF00289 Biotin carboxylase, N-terminal domain AhaeAN54_009690 PF01402 Ribbon-helix-helix protein, copG family AhaeAN54_009690 PF08753 NikR C terminal nickel binding domain AhaeAN54_009695 PF09084 NMT1/THI5 like AhaeAN54_009700 PF00005 ABC transporter AhaeAN54_009710 PF08281 Sigma-70, region 4 AhaeAN54_009710 PF04542 Sigma-70 region 2 AhaeAN54_009740 PF01126 Heme oxygenase AhaeAN54_009780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_009780 PF03466 LysR substrate binding domain AhaeAN54_009785 PF00682 HMGL-like AhaeAN54_009790 PF00289 Biotin carboxylase, N-terminal domain AhaeAN54_009790 PF00364 Biotin-requiring enzyme AhaeAN54_009790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AhaeAN54_009790 PF02785 Biotin carboxylase C-terminal domain AhaeAN54_009795 PF00378 Enoyl-CoA hydratase/isomerase AhaeAN54_009800 PF01039 Carboxyl transferase domain AhaeAN54_009805 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_009805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_009805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_009810 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_009815 PF13193 AMP-binding enzyme C-terminal domain AhaeAN54_009815 PF00501 AMP-binding enzyme AhaeAN54_009830 PF07690 Major Facilitator Superfamily AhaeAN54_009835 PF02803 Thiolase, C-terminal domain AhaeAN54_009835 PF00108 Thiolase, N-terminal domain AhaeAN54_009840 PF01144 Coenzyme A transferase AhaeAN54_009845 PF01144 Coenzyme A transferase AhaeAN54_009850 PF03466 LysR substrate binding domain AhaeAN54_009850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_009860 PF00593 TonB dependent receptor AhaeAN54_009860 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_009890 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AhaeAN54_009890 PF12833 Helix-turn-helix domain AhaeAN54_009895 PF02525 Flavodoxin-like fold AhaeAN54_009905 PF00990 Diguanylate cyclase, GGDEF domain AhaeAN54_009910 PF01264 Chorismate synthase AhaeAN54_009915 PF05175 Methyltransferase small domain AhaeAN54_009925 PF17862 AAA+ lid domain AhaeAN54_009925 PF01434 Peptidase family M41 AhaeAN54_009925 PF00004 ATPase family associated with various cellular activities (AAA) AhaeAN54_009935 PF05166 YcgL domain AhaeAN54_009940 PF01612 3'-5' exonuclease AhaeAN54_009940 PF00570 HRDC domain AhaeAN54_009945 PF13662 Toprim domain AhaeAN54_009945 PF02132 RecR protein AhaeAN54_009950 PF02575 YbaB/EbfC DNA-binding family AhaeAN54_009955 PF01053 Cys/Met metabolism PLP-dependent enzyme AhaeAN54_009965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AhaeAN54_009965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AhaeAN54_009990 PF01230 HIT domain AhaeAN54_010020 PF02684 Lipid-A-disaccharide synthetase AhaeAN54_010040 PF01925 Sulfite exporter TauE/SafE AhaeAN54_010045 PF00793 DAHP synthetase I family AhaeAN54_010055 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_010055 PF00593 TonB dependent receptor AhaeAN54_010065 PF02654 Cobalamin-5-phosphate synthase AhaeAN54_010075 PF00300 Histidine phosphatase superfamily (branch 1) AhaeAN54_010080 PF02277 Phosphoribosyltransferase AhaeAN54_010085 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AhaeAN54_010095 PF13419 Haloacid dehalogenase-like hydrolase AhaeAN54_010105 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_010105 PF00593 TonB dependent receptor AhaeAN54_010110 PF07690 Major Facilitator Superfamily AhaeAN54_010125 PF04183 IucA / IucC family AhaeAN54_010125 PF06276 Ferric iron reductase FhuF-like transporter AhaeAN54_010130 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AhaeAN54_010135 PF06276 Ferric iron reductase FhuF-like transporter AhaeAN54_010135 PF04183 IucA / IucC family AhaeAN54_010140 PF04073 Aminoacyl-tRNA editing domain AhaeAN54_010150 PF03109 ABC1 family AhaeAN54_010155 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_010155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_010155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_010160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_010160 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_010160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_010165 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_010165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AhaeAN54_010170 PF00487 Fatty acid desaturase AhaeAN54_010175 PF12852 Cupin AhaeAN54_010175 PF12833 Helix-turn-helix domain AhaeAN54_010180 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AhaeAN54_010180 PF00132 Bacterial transferase hexapeptide (six repeats) AhaeAN54_010185 PF07977 FabA-like domain AhaeAN54_010190 PF00132 Bacterial transferase hexapeptide (six repeats) AhaeAN54_010190 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AhaeAN54_010200 PF07244 Surface antigen variable number repeat AhaeAN54_010200 PF01103 Surface antigen AhaeAN54_010205 PF13180 PDZ domain AhaeAN54_010205 PF17820 PDZ domain AhaeAN54_010205 PF02163 Peptidase family M50 AhaeAN54_010210 PF13288 DXP reductoisomerase C-terminal domain AhaeAN54_010210 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AhaeAN54_010210 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AhaeAN54_010220 PF01255 Putative undecaprenyl diphosphate synthase AhaeAN54_010225 PF01765 Ribosome recycling factor AhaeAN54_010230 PF00696 Amino acid kinase family AhaeAN54_010235 PF04055 Radical SAM superfamily AhaeAN54_010235 PF18693 TRAM domain AhaeAN54_010235 PF00919 Uncharacterized protein family UPF0004 AhaeAN54_010240 PF00989 PAS fold AhaeAN54_010240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_010240 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_010245 PF02954 Bacterial regulatory protein, Fis family AhaeAN54_010245 PF00158 Sigma-54 interaction domain AhaeAN54_010245 PF00072 Response regulator receiver domain AhaeAN54_010250 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_010255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AhaeAN54_010255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AhaeAN54_010265 PF02542 YgbB family AhaeAN54_010280 PF01266 FAD dependent oxidoreductase AhaeAN54_010290 PF00206 Lyase AhaeAN54_010290 PF10415 Fumarase C C-terminus AhaeAN54_010295 PF16363 GDP-mannose 4,6 dehydratase AhaeAN54_010300 PF02635 DsrE/DsrF-like family AhaeAN54_010320 PF00892 EamA-like transporter family AhaeAN54_010325 PF00392 Bacterial regulatory proteins, gntR family AhaeAN54_010325 PF00155 Aminotransferase class I and II AhaeAN54_010330 PF01638 HxlR-like helix-turn-helix AhaeAN54_010335 PF00994 Probable molybdopterin binding domain AhaeAN54_010335 PF03453 MoeA N-terminal region (domain I and II) AhaeAN54_010335 PF03454 MoeA C-terminal region (domain IV) AhaeAN54_010340 PF01967 MoaC family AhaeAN54_010340 PF00994 Probable molybdopterin binding domain AhaeAN54_010345 PF02391 MoaE protein AhaeAN54_010355 PF04055 Radical SAM superfamily AhaeAN54_010355 PF06463 Molybdenum Cofactor Synthesis C AhaeAN54_010360 PF00384 Molybdopterin oxidoreductase AhaeAN54_010360 PF01568 Molydopterin dinucleotide binding domain AhaeAN54_010360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhaeAN54_010365 PF00291 Pyridoxal-phosphate dependent enzyme AhaeAN54_010370 PF12804 MobA-like NTP transferase domain AhaeAN54_010375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhaeAN54_010375 PF00384 Molybdopterin oxidoreductase AhaeAN54_010375 PF01568 Molydopterin dinucleotide binding domain AhaeAN54_010375 PF04324 BFD-like [2Fe-2S] binding domain AhaeAN54_010380 PF04324 BFD-like [2Fe-2S] binding domain AhaeAN54_010380 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AhaeAN54_010380 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AhaeAN54_010380 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_010380 PF18267 Rubredoxin NAD+ reductase C-terminal domain AhaeAN54_010385 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AhaeAN54_010385 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_010385 PF13806 Rieske-like [2Fe-2S] domain AhaeAN54_010385 PF18267 Rubredoxin NAD+ reductase C-terminal domain AhaeAN54_010385 PF04324 BFD-like [2Fe-2S] binding domain AhaeAN54_010385 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AhaeAN54_010390 PF07690 Major Facilitator Superfamily AhaeAN54_010400 PF00005 ABC transporter AhaeAN54_010405 PF01220 Dehydroquinase class II AhaeAN54_010410 PF00364 Biotin-requiring enzyme AhaeAN54_010415 PF00289 Biotin carboxylase, N-terminal domain AhaeAN54_010415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AhaeAN54_010415 PF02785 Biotin carboxylase C-terminal domain AhaeAN54_010425 PF01425 Amidase AhaeAN54_010430 PF00083 Sugar (and other) transporter AhaeAN54_010430 PF07690 Major Facilitator Superfamily AhaeAN54_010440 PF01645 Conserved region in glutamate synthase AhaeAN54_010455 PF01565 FAD binding domain AhaeAN54_010455 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AhaeAN54_010460 PF01451 Low molecular weight phosphotyrosine protein phosphatase AhaeAN54_010465 PF00465 Iron-containing alcohol dehydrogenase AhaeAN54_010475 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AhaeAN54_010475 PF12169 DNA polymerase III subunits gamma and tau domain III AhaeAN54_010475 PF12170 DNA polymerase III tau subunit V interacting with alpha AhaeAN54_010480 PF08007 Cupin superfamily protein AhaeAN54_010485 PF13613 Helix-turn-helix of DDE superfamily endonuclease AhaeAN54_010485 PF13359 DDE superfamily endonuclease AhaeAN54_010515 PF00916 Sulfate permease family AhaeAN54_010515 PF01740 STAS domain AhaeAN54_010520 PF00375 Sodium:dicarboxylate symporter family AhaeAN54_010535 PF00924 Mechanosensitive ion channel AhaeAN54_010545 PF00005 ABC transporter AhaeAN54_010545 PF00664 ABC transporter transmembrane region AhaeAN54_010555 PF12833 Helix-turn-helix domain AhaeAN54_010555 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AhaeAN54_010560 PF01597 Glycine cleavage H-protein AhaeAN54_010565 PF00474 Sodium:solute symporter family AhaeAN54_010570 PF01037 Lrp/AsnC ligand binding domain AhaeAN54_010575 PF00171 Aldehyde dehydrogenase family AhaeAN54_010575 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AhaeAN54_010575 PF14850 DNA-binding domain of Proline dehydrogenase AhaeAN54_010575 PF01619 Proline dehydrogenase AhaeAN54_010585 PF05958 tRNA (Uracil-5-)-methyltransferase AhaeAN54_010595 PF09992 Phosphodiester glycosidase AhaeAN54_010605 PF09857 Putative toxin of bacterial toxin-antitoxin pair AhaeAN54_010610 PF13508 Acetyltransferase (GNAT) domain AhaeAN54_010615 PF04264 YceI-like domain AhaeAN54_010635 PF00456 Transketolase, thiamine diphosphate binding domain AhaeAN54_010635 PF02779 Transketolase, pyrimidine binding domain AhaeAN54_010635 PF02780 Transketolase, C-terminal domain AhaeAN54_010640 PF02773 S-adenosylmethionine synthetase, C-terminal domain AhaeAN54_010640 PF02772 S-adenosylmethionine synthetase, central domain AhaeAN54_010640 PF00438 S-adenosylmethionine synthetase, N-terminal domain AhaeAN54_010655 PF03891 Domain of unknown function (DUF333) AhaeAN54_010675 PF00313 'Cold-shock' DNA-binding domain AhaeAN54_010680 PF00313 'Cold-shock' DNA-binding domain AhaeAN54_010695 PF02075 Crossover junction endodeoxyribonuclease RuvC AhaeAN54_010700 PF01256 Carbohydrate kinase AhaeAN54_010700 PF03853 YjeF-related protein N-terminus AhaeAN54_010705 PF08331 Domain of unknown function (DUF1730) AhaeAN54_010710 PF04055 Radical SAM superfamily AhaeAN54_010710 PF06968 Biotin and Thiamin Synthesis associated domain AhaeAN54_010725 PF16970 Type-1 fimbrial protein, A AhaeAN54_010730 PF02753 Pili assembly chaperone PapD, C-terminal domain AhaeAN54_010730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AhaeAN54_010735 PF00577 Outer membrane usher protein AhaeAN54_010735 PF13954 PapC N-terminal domain AhaeAN54_010735 PF13953 PapC C-terminal domain AhaeAN54_010740 PF00419 Fimbrial protein AhaeAN54_010750 PF00665 Integrase core domain AhaeAN54_010750 PF13936 Helix-turn-helix domain AhaeAN54_010780 PF01709 Transcriptional regulator AhaeAN54_010790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AhaeAN54_010795 PF00800 Prephenate dehydratase AhaeAN54_010795 PF01842 ACT domain AhaeAN54_010795 PF01817 Chorismate mutase type II AhaeAN54_010805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_010805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_010805 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_010810 PF02885 Glycosyl transferase family, helical bundle domain AhaeAN54_010810 PF00591 Glycosyl transferase family, a/b domain AhaeAN54_010830 PF04717 Type VI secretion system, phage-baseplate injector AhaeAN54_010835 PF07023 Protein of unknown function (DUF1315) AhaeAN54_010840 PF01513 ATP-NAD kinase AhaeAN54_010845 PF00912 Transglycosylase AhaeAN54_010845 PF00905 Penicillin binding protein transpeptidase domain AhaeAN54_010845 PF14814 Bifunctional transglycosylase second domain AhaeAN54_010855 PF00293 NUDIX domain AhaeAN54_010865 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_010865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_010865 PF08521 Two-component sensor kinase N-terminal AhaeAN54_010870 PF00072 Response regulator receiver domain AhaeAN54_010870 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_010880 PF00437 Type II/IV secretion system protein AhaeAN54_010885 PF01980 tRNA-methyltransferase O AhaeAN54_010885 PF18389 TrmO C-terminal domain AhaeAN54_010890 PF00970 Oxidoreductase FAD-binding domain AhaeAN54_010890 PF00175 Oxidoreductase NAD-binding domain AhaeAN54_010915 PF04284 Protein of unknown function (DUF441) AhaeAN54_010920 PF03466 LysR substrate binding domain AhaeAN54_010920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_010925 PF02677 Epoxyqueuosine reductase QueH AhaeAN54_010935 PF07690 Major Facilitator Superfamily AhaeAN54_010940 PF01497 Periplasmic binding protein AhaeAN54_010945 PF00005 ABC transporter AhaeAN54_010950 PF01032 FecCD transport family AhaeAN54_010955 PF01032 FecCD transport family AhaeAN54_010965 PF00520 Ion transport protein AhaeAN54_010965 PF00027 Cyclic nucleotide-binding domain AhaeAN54_010975 PF00939 Sodium:sulfate symporter transmembrane region AhaeAN54_010985 PF06434 Aconitate hydratase 2 N-terminus AhaeAN54_010985 PF11791 Aconitate B N-terminal domain AhaeAN54_010985 PF00330 Aconitase family (aconitate hydratase) AhaeAN54_011000 PF07244 Surface antigen variable number repeat AhaeAN54_011000 PF17243 POTRA domain TamA domain 1 AhaeAN54_011000 PF01103 Surface antigen AhaeAN54_011005 PF07690 Major Facilitator Superfamily AhaeAN54_011010 PF03232 Ubiquinone biosynthesis protein COQ7 AhaeAN54_011030 PF02152 Dihydroneopterin aldolase AhaeAN54_011035 PF03109 ABC1 family AhaeAN54_011040 PF00899 ThiF family AhaeAN54_011045 PF03280 Proteobacterial lipase chaperone protein AhaeAN54_011050 PF00561 alpha/beta hydrolase fold AhaeAN54_011060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AhaeAN54_011060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AhaeAN54_011070 PF13737 Transposase DDE domain AhaeAN54_011075 PF00106 short chain dehydrogenase AhaeAN54_011080 PF12833 Helix-turn-helix domain AhaeAN54_011080 PF02311 AraC-like ligand binding domain AhaeAN54_011090 PF13847 Methyltransferase domain AhaeAN54_011090 PF17827 PrmC N-terminal domain AhaeAN54_011095 PF00472 RF-1 domain AhaeAN54_011095 PF03462 PCRF domain AhaeAN54_011115 PF00464 Serine hydroxymethyltransferase AhaeAN54_011140 PF00005 ABC transporter AhaeAN54_011145 PF01061 ABC-2 type transporter AhaeAN54_011150 PF14489 QueF-like protein AhaeAN54_011150 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AhaeAN54_011160 PF01098 Cell cycle protein AhaeAN54_011165 PF13406 Transglycosylase SLT domain AhaeAN54_011170 PF05036 Sporulation related domain AhaeAN54_011170 PF03330 Lytic transglycolase AhaeAN54_011185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AhaeAN54_011185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_011190 PF04055 Radical SAM superfamily AhaeAN54_011215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AhaeAN54_011215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AhaeAN54_011220 PF00271 Helicase conserved C-terminal domain AhaeAN54_011220 PF00270 DEAD/DEAH box helicase AhaeAN54_011220 PF11898 Domain of unknown function (DUF3418) AhaeAN54_011220 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AhaeAN54_011220 PF04408 Helicase associated domain (HA2) AhaeAN54_011225 PF10417 C-terminal domain of 1-Cys peroxiredoxin AhaeAN54_011225 PF00578 AhpC/TSA family AhaeAN54_011235 PF00487 Fatty acid desaturase AhaeAN54_011245 PF01596 O-methyltransferase AhaeAN54_011255 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_011255 PF13192 Thioredoxin domain AhaeAN54_011265 PF02798 Glutathione S-transferase, N-terminal domain AhaeAN54_011265 PF00043 Glutathione S-transferase, C-terminal domain AhaeAN54_011275 PF02390 Putative methyltransferase AhaeAN54_011290 PF14493 Helix-turn-helix domain AhaeAN54_011290 PF05970 PIF1-like helicase AhaeAN54_011305 PF13520 Amino acid permease AhaeAN54_011310 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AhaeAN54_011315 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AhaeAN54_011320 PF13302 Acetyltransferase (GNAT) domain AhaeAN54_011325 PF00117 Glutamine amidotransferase class-I AhaeAN54_011325 PF00958 GMP synthase C terminal domain AhaeAN54_011325 PF02540 NAD synthase AhaeAN54_011340 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AhaeAN54_011340 PF00749 tRNA synthetases class I (E and Q), catalytic domain AhaeAN54_011345 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AhaeAN54_011350 PF00149 Calcineurin-like phosphoesterase AhaeAN54_011355 PF00881 Nitroreductase family AhaeAN54_011360 PF02525 Flavodoxin-like fold AhaeAN54_011375 PF17209 Hfq protein AhaeAN54_011385 PF01119 DNA mismatch repair protein, C-terminal domain AhaeAN54_011385 PF08676 MutL C terminal dimerisation domain AhaeAN54_011390 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AhaeAN54_011395 PF00849 RNA pseudouridylate synthase AhaeAN54_011395 PF01479 S4 domain AhaeAN54_011405 PF00583 Acetyltransferase (GNAT) family AhaeAN54_011410 PF00849 RNA pseudouridylate synthase AhaeAN54_011410 PF01479 S4 domain AhaeAN54_011420 PF00296 Luciferase-like monooxygenase AhaeAN54_011425 PF00563 EAL domain AhaeAN54_011425 PF00990 Diguanylate cyclase, GGDEF domain AhaeAN54_011425 PF03707 Bacterial signalling protein N terminal repeat AhaeAN54_011430 PF03618 Kinase/pyrophosphorylase AhaeAN54_011435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AhaeAN54_011435 PF00391 PEP-utilising enzyme, mobile domain AhaeAN54_011435 PF02896 PEP-utilising enzyme, TIM barrel domain AhaeAN54_011445 PF06481 COX Aromatic Rich Motif AhaeAN54_011445 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AhaeAN54_011450 PF00115 Cytochrome C and Quinol oxidase polypeptide I AhaeAN54_011455 PF00510 Cytochrome c oxidase subunit III AhaeAN54_011460 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AhaeAN54_011465 PF01040 UbiA prenyltransferase family AhaeAN54_011470 PF01250 Ribosomal protein S6 AhaeAN54_011475 PF01084 Ribosomal protein S18 AhaeAN54_011480 PF01281 Ribosomal protein L9, N-terminal domain AhaeAN54_011480 PF03948 Ribosomal protein L9, C-terminal domain AhaeAN54_011490 PF03796 DnaB-like helicase C terminal domain AhaeAN54_011490 PF00772 DnaB-like helicase N terminal domain AhaeAN54_011495 PF01168 Alanine racemase, N-terminal domain AhaeAN54_011495 PF00842 Alanine racemase, C-terminal domain AhaeAN54_011510 PF01841 Transglutaminase-like superfamily AhaeAN54_011510 PF08379 Bacterial transglutaminase-like N-terminal region AhaeAN54_011520 PF14403 Circularly permuted ATP-grasp type 2 AhaeAN54_011530 PF00709 Adenylosuccinate synthetase AhaeAN54_011535 PF13393 Histidyl-tRNA synthetase AhaeAN54_011545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AhaeAN54_011545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AhaeAN54_011550 PF02272 DHHA1 domain AhaeAN54_011550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AhaeAN54_011550 PF01411 tRNA synthetases class II (A) AhaeAN54_011555 PF00589 Phage integrase family AhaeAN54_011555 PF13356 Arm DNA-binding domain AhaeAN54_011570 PF01726 LexA DNA binding domain AhaeAN54_011570 PF00717 Peptidase S24-like AhaeAN54_011575 PF11799 impB/mucB/samB family C-terminal domain AhaeAN54_011575 PF00817 impB/mucB/samB family AhaeAN54_011575 PF13438 Domain of unknown function (DUF4113) AhaeAN54_011790 PF04607 Region found in RelA / SpoT proteins AhaeAN54_011830 PF01695 IstB-like ATP binding protein AhaeAN54_011950 PF01842 ACT domain AhaeAN54_011950 PF13840 ACT domain AhaeAN54_011950 PF00696 Amino acid kinase family AhaeAN54_011955 PF02599 Global regulator protein family AhaeAN54_011960 PF01351 Ribonuclease HII AhaeAN54_011970 PF01292 Prokaryotic cytochrome b561 AhaeAN54_011975 PF00962 Adenosine/AMP deaminase AhaeAN54_011980 PF00860 Permease family AhaeAN54_012010 PF12833 Helix-turn-helix domain AhaeAN54_012010 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AhaeAN54_012020 PF00893 Small Multidrug Resistance protein AhaeAN54_012025 PF01134 Glucose inhibited division protein A AhaeAN54_012025 PF13932 GidA associated domain AhaeAN54_012055 PF02954 Bacterial regulatory protein, Fis family AhaeAN54_012060 PF01808 AICARFT/IMPCHase bienzyme AhaeAN54_012060 PF02142 MGS-like domain AhaeAN54_012065 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AhaeAN54_012065 PF02843 Phosphoribosylglycinamide synthetase, C domain AhaeAN54_012065 PF02844 Phosphoribosylglycinamide synthetase, N domain AhaeAN54_012070 PF03180 NLPA lipoprotein AhaeAN54_012075 PF09383 NIL domain AhaeAN54_012075 PF00005 ABC transporter AhaeAN54_012080 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_012095 PF00753 Metallo-beta-lactamase superfamily AhaeAN54_012095 PF16123 Hydroxyacylglutathione hydrolase C-terminus AhaeAN54_012105 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AhaeAN54_012105 PF05221 S-adenosyl-L-homocysteine hydrolase AhaeAN54_012110 PF02219 Methylenetetrahydrofolate reductase AhaeAN54_012115 PF04452 RNA methyltransferase AhaeAN54_012120 PF00990 Diguanylate cyclase, GGDEF domain AhaeAN54_012120 PF03707 Bacterial signalling protein N terminal repeat AhaeAN54_012120 PF00563 EAL domain AhaeAN54_012125 PF00390 Malic enzyme, N-terminal domain AhaeAN54_012125 PF03949 Malic enzyme, NAD binding domain AhaeAN54_012125 PF01515 Phosphate acetyl/butaryl transferase AhaeAN54_012130 PF12627 Probable RNA and SrmB- binding site of polymerase A AhaeAN54_012130 PF01743 Poly A polymerase head domain AhaeAN54_012135 PF00889 Elongation factor TS AhaeAN54_012140 PF00318 Ribosomal protein S2 AhaeAN54_012145 PF00557 Metallopeptidase family M24 AhaeAN54_012155 PF07690 Major Facilitator Superfamily AhaeAN54_012165 PF13180 PDZ domain AhaeAN54_012170 PF01784 NIF3 (NGG1p interacting factor 3) AhaeAN54_012175 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AhaeAN54_012175 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AhaeAN54_012220 PF01040 UbiA prenyltransferase family AhaeAN54_012225 PF04345 Chorismate lyase AhaeAN54_012230 PF18766 SWI2/SNF2 ATPase AhaeAN54_012230 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AhaeAN54_012230 PF12008 Type I restriction and modification enzyme - subunit R C terminal AhaeAN54_012235 PF04480 Protein of unknown function (DUF559) AhaeAN54_012240 PF01420 Type I restriction modification DNA specificity domain AhaeAN54_012245 PF12161 HsdM N-terminal domain AhaeAN54_012245 PF02384 N-6 DNA Methylase AhaeAN54_012255 PF00117 Glutamine amidotransferase class-I AhaeAN54_012265 PF03476 MOSC N-terminal beta barrel domain AhaeAN54_012265 PF03473 MOSC domain AhaeAN54_012265 PF00111 2Fe-2S iron-sulfur cluster binding domain AhaeAN54_012270 PF02885 Glycosyl transferase family, helical bundle domain AhaeAN54_012270 PF00591 Glycosyl transferase family, a/b domain AhaeAN54_012275 PF00218 Indole-3-glycerol phosphate synthase AhaeAN54_012290 PF01227 GTP cyclohydrolase I AhaeAN54_012310 PF05675 Protein of unknown function (DUF817) AhaeAN54_012315 PF01208 Uroporphyrinogen decarboxylase (URO-D) AhaeAN54_012330 PF01979 Amidohydrolase family AhaeAN54_012335 PF00929 Exonuclease AhaeAN54_012345 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_012345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AhaeAN54_012350 PF00005 ABC transporter AhaeAN54_012350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhaeAN54_012355 PF12911 N-terminal TM domain of oligopeptide transport permease C AhaeAN54_012355 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_012360 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_012365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhaeAN54_012370 PF01476 LysM domain AhaeAN54_012370 PF01464 Transglycosylase SLT domain AhaeAN54_012370 PF01476 LysM domain AhaeAN54_012370 PF01464 Transglycosylase SLT domain AhaeAN54_012375 PF00929 Exonuclease AhaeAN54_012385 PF00293 NUDIX domain AhaeAN54_012385 PF09297 NADH pyrophosphatase zinc ribbon domain AhaeAN54_012390 PF07859 alpha/beta hydrolase fold AhaeAN54_012395 PF04972 BON domain AhaeAN54_012400 PF02021 Uncharacterised protein family UPF0102 AhaeAN54_012410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AhaeAN54_012415 PF03466 LysR substrate binding domain AhaeAN54_012415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_012420 PF01810 LysE type translocator AhaeAN54_012430 PF13411 MerR HTH family regulatory protein AhaeAN54_012440 PF01494 FAD binding domain AhaeAN54_012445 PF01494 FAD binding domain AhaeAN54_012450 PF00557 Metallopeptidase family M24 AhaeAN54_012450 PF05195 Aminopeptidase P, N-terminal domain AhaeAN54_012455 PF03695 Uncharacterised protein family (UPF0149) AhaeAN54_012485 PF13411 MerR HTH family regulatory protein AhaeAN54_012495 PF01812 5-formyltetrahydrofolate cyclo-ligase family AhaeAN54_012500 PF05362 Lon protease (S16) C-terminal proteolytic domain AhaeAN54_012500 PF02190 ATP-dependent protease La (LON) substrate-binding domain AhaeAN54_012500 PF00004 ATPase family associated with various cellular activities (AAA) AhaeAN54_012505 PF02590 Predicted SPOUT methyltransferase AhaeAN54_012510 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AhaeAN54_012520 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AhaeAN54_012520 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AhaeAN54_012555 PF04717 Type VI secretion system, phage-baseplate injector AhaeAN54_012560 PF04060 Putative Fe-S cluster AhaeAN54_012565 PF10576 Iron-sulfur binding domain of endonuclease III AhaeAN54_012565 PF00633 Helix-hairpin-helix motif AhaeAN54_012565 PF00730 HhH-GPD superfamily base excision DNA repair protein AhaeAN54_012575 PF05191 Adenylate kinase, active site lid AhaeAN54_012590 PF03717 Penicillin-binding Protein dimerisation domain AhaeAN54_012590 PF00905 Penicillin binding protein transpeptidase domain AhaeAN54_012620 PF08496 Peptidase family S49 N-terminal AhaeAN54_012620 PF01343 Peptidase family S49 AhaeAN54_012625 PF00005 ABC transporter AhaeAN54_012630 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_012635 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_012645 PF00355 Rieske [2Fe-2S] domain AhaeAN54_012650 PF00282 Pyridoxal-dependent decarboxylase conserved domain AhaeAN54_012655 PF00202 Aminotransferase class-III AhaeAN54_012665 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_012675 PF00487 Fatty acid desaturase AhaeAN54_012680 PF00970 Oxidoreductase FAD-binding domain AhaeAN54_012680 PF00175 Oxidoreductase NAD-binding domain AhaeAN54_012680 PF00111 2Fe-2S iron-sulfur cluster binding domain AhaeAN54_012685 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_012695 PF00210 Ferritin-like domain AhaeAN54_012700 PF12137 RNA polymerase recycling family C-terminal AhaeAN54_012700 PF00176 SNF2 family N-terminal domain AhaeAN54_012700 PF18339 RapA N-terminal Tudor like domain 1 AhaeAN54_012700 PF00271 Helicase conserved C-terminal domain AhaeAN54_012700 PF18337 RapA N-terminal Tudor like domain AhaeAN54_012705 PF00849 RNA pseudouridylate synthase AhaeAN54_012710 PF03928 Haem-degrading AhaeAN54_012715 PF00202 Aminotransferase class-III AhaeAN54_012720 PF02581 Thiamine monophosphate synthase AhaeAN54_012745 PF01699 Sodium/calcium exchanger protein AhaeAN54_012750 PF00675 Insulinase (Peptidase family M16) AhaeAN54_012750 PF05193 Peptidase M16 inactive domain AhaeAN54_012755 PF02567 Phenazine biosynthesis-like protein AhaeAN54_012765 PF00180 Isocitrate/isopropylmalate dehydrogenase AhaeAN54_012770 PF00849 RNA pseudouridylate synthase AhaeAN54_012775 PF03971 Monomeric isocitrate dehydrogenase AhaeAN54_012780 PF00576 HIUase/Transthyretin family AhaeAN54_012790 PF07943 Penicillin-binding protein 5, C-terminal domain AhaeAN54_012790 PF00768 D-alanyl-D-alanine carboxypeptidase AhaeAN54_012795 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_012800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhaeAN54_012805 PF00875 DNA photolyase AhaeAN54_012805 PF03441 FAD binding domain of DNA photolyase AhaeAN54_012825 PF01654 Cytochrome bd terminal oxidase subunit I AhaeAN54_012830 PF02322 Cytochrome bd terminal oxidase subunit II AhaeAN54_012835 PF03060 Nitronate monooxygenase AhaeAN54_012840 PF02503 Polyphosphate kinase middle domain AhaeAN54_012840 PF17941 Polyphosphate kinase C-terminal domain 1 AhaeAN54_012840 PF13090 Polyphosphate kinase C-terminal domain 2 AhaeAN54_012840 PF13089 Polyphosphate kinase N-terminal domain AhaeAN54_012845 PF00912 Transglycosylase AhaeAN54_012850 PF01694 Rhomboid family AhaeAN54_012865 PF00005 ABC transporter AhaeAN54_012870 PF13472 GDSL-like Lipase/Acylhydrolase family AhaeAN54_012875 PF00583 Acetyltransferase (GNAT) family AhaeAN54_012880 PF00484 Carbonic anhydrase AhaeAN54_012885 PF00561 alpha/beta hydrolase fold AhaeAN54_012895 PF00593 TonB dependent receptor AhaeAN54_012895 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_012900 PF01521 Iron-sulphur cluster biosynthesis AhaeAN54_012900 PF01106 NifU-like domain AhaeAN54_012915 PF00152 tRNA synthetases class II (D, K and N) AhaeAN54_012920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AhaeAN54_012920 PF11890 Domain of unknown function (DUF3410) AhaeAN54_012920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AhaeAN54_012925 PF01219 Prokaryotic diacylglycerol kinase AhaeAN54_012930 PF00118 TCP-1/cpn60 chaperonin family AhaeAN54_012935 PF00166 Chaperonin 10 Kd subunit AhaeAN54_012940 PF00149 Calcineurin-like phosphoesterase AhaeAN54_012945 PF00781 Diacylglycerol kinase catalytic domain AhaeAN54_012950 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AhaeAN54_012950 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AhaeAN54_012965 PF13737 Transposase DDE domain AhaeAN54_012975 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_012975 PF07660 Secretin and TonB N terminus short domain AhaeAN54_012975 PF00593 TonB dependent receptor AhaeAN54_012980 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AhaeAN54_012980 PF01266 FAD dependent oxidoreductase AhaeAN54_012985 PF00455 DeoR C terminal sensor domain AhaeAN54_012985 PF08220 DeoR-like helix-turn-helix domain AhaeAN54_012990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AhaeAN54_012990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AhaeAN54_013000 PF14542 GCN5-related N-acetyl-transferase AhaeAN54_013010 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AhaeAN54_013010 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AhaeAN54_013025 PF05656 Protein of unknown function (DUF805) AhaeAN54_013070 PF09423 PhoD-like phosphatase AhaeAN54_013070 PF16655 PhoD-like phosphatase, N-terminal domain AhaeAN54_013085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AhaeAN54_013090 PF07152 YaeQ protein AhaeAN54_013095 PF07683 Cobalamin synthesis protein cobW C-terminal domain AhaeAN54_013095 PF02492 CobW/HypB/UreG, nucleotide-binding domain AhaeAN54_013105 PF03061 Thioesterase superfamily AhaeAN54_013120 PF00665 Integrase core domain AhaeAN54_013120 PF13936 Helix-turn-helix domain AhaeAN54_013130 PF07690 Major Facilitator Superfamily AhaeAN54_013135 PF00378 Enoyl-CoA hydratase/isomerase AhaeAN54_013140 PF00171 Aldehyde dehydrogenase family AhaeAN54_013150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_013150 PF02770 Acyl-CoA dehydrogenase, middle domain AhaeAN54_013150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_013155 PF03573 outer membrane porin, OprD family AhaeAN54_013170 PF07519 Tannase and feruloyl esterase AhaeAN54_013175 PF01494 FAD binding domain AhaeAN54_013180 PF01614 Bacterial transcriptional regulator AhaeAN54_013180 PF09339 IclR helix-turn-helix domain AhaeAN54_013185 PF00390 Malic enzyme, N-terminal domain AhaeAN54_013185 PF03949 Malic enzyme, NAD binding domain AhaeAN54_013190 PF00324 Amino acid permease AhaeAN54_013195 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AhaeAN54_013200 PF04996 Succinylarginine dihydrolase AhaeAN54_013205 PF00171 Aldehyde dehydrogenase family AhaeAN54_013210 PF04958 Arginine N-succinyltransferase beta subunit AhaeAN54_013215 PF00202 Aminotransferase class-III AhaeAN54_013220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AhaeAN54_013220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AhaeAN54_013230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AhaeAN54_013230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AhaeAN54_013230 PF09317 Domain of unknown function (DUF1974) AhaeAN54_013235 PF00465 Iron-containing alcohol dehydrogenase AhaeAN54_013245 PF00171 Aldehyde dehydrogenase family AhaeAN54_013305 PF07690 Major Facilitator Superfamily AhaeAN54_013310 PF00529 HlyD membrane-fusion protein of T1SS AhaeAN54_013310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_013315 PF03061 Thioesterase superfamily AhaeAN54_013320 PF00490 Delta-aminolevulinic acid dehydratase AhaeAN54_013325 PF01266 FAD dependent oxidoreductase AhaeAN54_013330 PF08338 Domain of unknown function (DUF1731) AhaeAN54_013330 PF01370 NAD dependent epimerase/dehydratase family AhaeAN54_013345 PF00378 Enoyl-CoA hydratase/isomerase AhaeAN54_013350 PF02028 BCCT, betaine/carnitine/choline family transporter AhaeAN54_013355 PF00149 Calcineurin-like phosphoesterase AhaeAN54_013355 PF12320 Type 5 capsule protein repressor C-terminal domain AhaeAN54_013365 PF01168 Alanine racemase, N-terminal domain AhaeAN54_013370 PF00437 Type II/IV secretion system protein AhaeAN54_013375 PF00437 Type II/IV secretion system protein AhaeAN54_013380 PF01475 Ferric uptake regulator family AhaeAN54_013385 PF04355 SmpA / OmlA family AhaeAN54_013390 PF03658 RnfH family Ubiquitin AhaeAN54_013400 PF01814 Hemerythrin HHE cation binding domain AhaeAN54_013405 PF13230 Glutamine amidotransferases class-II AhaeAN54_013415 PF00696 Amino acid kinase family AhaeAN54_013420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AhaeAN54_013420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AhaeAN54_013420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AhaeAN54_013420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AhaeAN54_013425 PF00692 dUTPase AhaeAN54_013430 PF00580 UvrD/REP helicase N-terminal domain AhaeAN54_013430 PF13361 UvrD-like helicase C-terminal domain AhaeAN54_013435 PF00691 OmpA family AhaeAN54_013435 PF13488 Glycine zipper AhaeAN54_013440 PF01553 Acyltransferase AhaeAN54_013450 PF03775 Septum formation inhibitor MinC, C-terminal domain AhaeAN54_013455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AhaeAN54_013460 PF03776 Septum formation topological specificity factor MinE AhaeAN54_013470 PF01810 LysE type translocator AhaeAN54_013475 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AhaeAN54_013475 PF01580 FtsK/SpoIIIE family AhaeAN54_013475 PF17854 FtsK alpha domain AhaeAN54_013475 PF09397 Ftsk gamma domain AhaeAN54_013480 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_013485 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AhaeAN54_013490 PF04376 Arginine-tRNA-protein transferase, N terminus AhaeAN54_013490 PF04377 Arginine-tRNA-protein transferase, C terminus AhaeAN54_013495 PF00583 Acetyltransferase (GNAT) family AhaeAN54_013510 PF03144 Elongation factor Tu domain 2 AhaeAN54_013510 PF00009 Elongation factor Tu GTP binding domain AhaeAN54_013510 PF03143 Elongation factor Tu C-terminal domain AhaeAN54_013515 PF03144 Elongation factor Tu domain 2 AhaeAN54_013515 PF00679 Elongation factor G C-terminus AhaeAN54_013515 PF14492 Elongation Factor G, domain II AhaeAN54_013515 PF03764 Elongation factor G, domain IV AhaeAN54_013515 PF00009 Elongation factor Tu GTP binding domain AhaeAN54_013520 PF00177 Ribosomal protein S7p/S5e AhaeAN54_013525 PF00164 Ribosomal protein S12/S23 AhaeAN54_013535 PF00109 Beta-ketoacyl synthase, N-terminal domain AhaeAN54_013535 PF02801 Beta-ketoacyl synthase, C-terminal domain AhaeAN54_013550 PF13613 Helix-turn-helix of DDE superfamily endonuclease AhaeAN54_013550 PF13359 DDE superfamily endonuclease AhaeAN54_013570 PF02540 NAD synthase AhaeAN54_013570 PF00795 Carbon-nitrogen hydrolase AhaeAN54_013595 PF00037 4Fe-4S binding domain AhaeAN54_013600 PF01467 Cytidylyltransferase-like AhaeAN54_013605 PF13356 Arm DNA-binding domain AhaeAN54_013605 PF00589 Phage integrase family AhaeAN54_013605 PF14659 Phage integrase, N-terminal SAM-like domain AhaeAN54_013640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_013655 PF02421 Ferrous iron transport protein B AhaeAN54_013655 PF07664 Ferrous iron transport protein B C terminus AhaeAN54_013655 PF07670 Nucleoside recognition AhaeAN54_013665 PF01545 Cation efflux family AhaeAN54_013680 PF07732 Multicopper oxidase AhaeAN54_013680 PF07731 Multicopper oxidase AhaeAN54_013680 PF00394 Multicopper oxidase AhaeAN54_013690 PF00072 Response regulator receiver domain AhaeAN54_013690 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_013695 PF00672 HAMP domain AhaeAN54_013695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_013695 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_013805 PF01668 SmpB protein AhaeAN54_013810 PF03358 NADPH-dependent FMN reductase AhaeAN54_013820 PF01479 S4 domain AhaeAN54_013820 PF00849 RNA pseudouridylate synthase AhaeAN54_013825 PF13525 Outer membrane lipoprotein AhaeAN54_013830 PF10410 DnaB-helicase binding domain of primase AhaeAN54_013830 PF08278 DNA primase DnaG DnaB-binding AhaeAN54_013830 PF01807 CHC2 zinc finger AhaeAN54_013830 PF08275 DNA primase catalytic core, N-terminal domain AhaeAN54_013840 PF13359 DDE superfamily endonuclease AhaeAN54_013840 PF13613 Helix-turn-helix of DDE superfamily endonuclease AhaeAN54_013855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AhaeAN54_013855 PF01488 Shikimate / quinate 5-dehydrogenase AhaeAN54_013855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AhaeAN54_013865 PF03550 Outer membrane lipoprotein LolB AhaeAN54_013870 PF08544 GHMP kinases C terminal AhaeAN54_013870 PF00288 GHMP kinases N terminal domain AhaeAN54_013880 PF14572 Phosphoribosyl synthetase-associated domain AhaeAN54_013880 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AhaeAN54_013885 PF01386 Ribosomal L25p family AhaeAN54_013890 PF01195 Peptidyl-tRNA hydrolase AhaeAN54_013895 PF02261 Aspartate decarboxylase AhaeAN54_013900 PF00027 Cyclic nucleotide-binding domain AhaeAN54_013900 PF01734 Patatin-like phospholipase AhaeAN54_013915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AhaeAN54_013920 PF13419 Haloacid dehalogenase-like hydrolase AhaeAN54_013925 PF02581 Thiamine monophosphate synthase AhaeAN54_013925 PF03070 TENA/THI-4/PQQC family AhaeAN54_013925 PF08543 Phosphomethylpyrimidine kinase AhaeAN54_013935 PF13737 Transposase DDE domain AhaeAN54_013945 PF04972 BON domain AhaeAN54_013945 PF01476 LysM domain AhaeAN54_013950 PF00550 Phosphopantetheine attachment site AhaeAN54_013955 PF00550 Phosphopantetheine attachment site AhaeAN54_013965 PF00698 Acyl transferase domain AhaeAN54_013975 PF01783 Ribosomal L32p protein family AhaeAN54_013980 PF02620 Large ribosomal RNA subunit accumulation protein YceD AhaeAN54_013985 PF04315 Elongation factor P hydroxylase AhaeAN54_013990 PF01300 Telomere recombination AhaeAN54_014010 PF02616 Segregation and condensation protein ScpA AhaeAN54_014015 PF04079 Segregation and condensation complex subunit ScpB AhaeAN54_014020 PF01479 S4 domain AhaeAN54_014020 PF00849 RNA pseudouridylate synthase AhaeAN54_014025 PF00005 ABC transporter AhaeAN54_014025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AhaeAN54_014030 PF12911 N-terminal TM domain of oligopeptide transport permease C AhaeAN54_014030 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_014035 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_014050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AhaeAN54_014055 PF13737 Transposase DDE domain AhaeAN54_014060 PF00593 TonB dependent receptor AhaeAN54_014060 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_014070 PF01618 MotA/TolQ/ExbB proton channel family AhaeAN54_014075 PF02472 Biopolymer transport protein ExbD/TolR AhaeAN54_014080 PF02472 Biopolymer transport protein ExbD/TolR AhaeAN54_014100 PF00155 Aminotransferase class I and II AhaeAN54_014105 PF04055 Radical SAM superfamily AhaeAN54_014105 PF06968 Biotin and Thiamin Synthesis associated domain AhaeAN54_014105 PF00202 Aminotransferase class-III AhaeAN54_014115 PF00561 alpha/beta hydrolase fold AhaeAN54_014125 PF00578 AhpC/TSA family AhaeAN54_014130 PF00210 Ferritin-like domain AhaeAN54_014140 PF01653 NAD-dependent DNA ligase adenylation domain AhaeAN54_014140 PF12826 Helix-hairpin-helix motif AhaeAN54_014140 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AhaeAN54_014140 PF03120 NAD-dependent DNA ligase OB-fold domain AhaeAN54_014140 PF00533 BRCA1 C Terminus (BRCT) domain AhaeAN54_014150 PF06470 SMC proteins Flexible Hinge Domain AhaeAN54_014150 PF02463 RecF/RecN/SMC N terminal domain AhaeAN54_014160 PF01925 Sulfite exporter TauE/SafE AhaeAN54_014170 PF03309 Type III pantothenate kinase AhaeAN54_014185 PF02881 SRP54-type protein, helical bundle domain AhaeAN54_014185 PF00448 SRP54-type protein, GTPase domain AhaeAN54_014185 PF02978 Signal peptide binding domain AhaeAN54_014195 PF01207 Dihydrouridine synthase (Dus) AhaeAN54_014215 PF13737 Transposase DDE domain AhaeAN54_014220 PF00692 dUTPase AhaeAN54_014245 PF10609 NUBPL iron-transfer P-loop NTPase AhaeAN54_014255 PF13302 Acetyltransferase (GNAT) domain AhaeAN54_014265 PF09334 tRNA synthetases class I (M) AhaeAN54_014265 PF01588 Putative tRNA binding domain AhaeAN54_014280 PF13737 Transposase DDE domain AhaeAN54_014305 PF00291 Pyridoxal-phosphate dependent enzyme AhaeAN54_014315 PF05552 Conserved TM helix AhaeAN54_014330 PF00970 Oxidoreductase FAD-binding domain AhaeAN54_014330 PF00175 Oxidoreductase NAD-binding domain AhaeAN54_014335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_014335 PF03466 LysR substrate binding domain AhaeAN54_014365 PF00361 Proton-conducting membrane transporter AhaeAN54_014370 PF00361 Proton-conducting membrane transporter AhaeAN54_014375 PF00361 Proton-conducting membrane transporter AhaeAN54_014375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AhaeAN54_014380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AhaeAN54_014385 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AhaeAN54_014390 PF12838 4Fe-4S dicluster domain AhaeAN54_014395 PF00146 NADH dehydrogenase AhaeAN54_014400 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AhaeAN54_014400 PF00384 Molybdopterin oxidoreductase AhaeAN54_014400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AhaeAN54_014405 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AhaeAN54_014405 PF10531 SLBB domain AhaeAN54_014405 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AhaeAN54_014415 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AhaeAN54_014415 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AhaeAN54_014420 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AhaeAN54_014425 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AhaeAN54_014430 PF00990 Diguanylate cyclase, GGDEF domain AhaeAN54_014430 PF17151 Periplasmic sensor domain AhaeAN54_014450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_014450 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_014450 PF00672 HAMP domain AhaeAN54_014455 PF00486 Transcriptional regulatory protein, C terminal AhaeAN54_014455 PF00072 Response regulator receiver domain AhaeAN54_014460 PF00317 Ribonucleotide reductase, all-alpha domain AhaeAN54_014460 PF02867 Ribonucleotide reductase, barrel domain AhaeAN54_014460 PF03477 ATP cone domain AhaeAN54_014470 PF00268 Ribonucleotide reductase, small chain AhaeAN54_014500 PF02445 Quinolinate synthetase A protein AhaeAN54_014505 PF01960 ArgJ family AhaeAN54_014510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AhaeAN54_014510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AhaeAN54_014515 PF00893 Small Multidrug Resistance protein AhaeAN54_014530 PF05275 Copper resistance protein B precursor (CopB) AhaeAN54_014535 PF00394 Multicopper oxidase AhaeAN54_014535 PF07732 Multicopper oxidase AhaeAN54_014535 PF07731 Multicopper oxidase AhaeAN54_014545 PF00834 Ribulose-phosphate 3 epimerase family AhaeAN54_014555 PF00756 Putative esterase AhaeAN54_014565 PF04445 Putative SAM-dependent methyltransferase AhaeAN54_014570 PF02673 Bacitracin resistance protein BacA AhaeAN54_014575 PF00814 Glycoprotease family AhaeAN54_014580 PF00132 Bacterial transferase hexapeptide (six repeats) AhaeAN54_014585 PF00293 NUDIX domain AhaeAN54_014615 PF00425 chorismate binding enzyme AhaeAN54_014615 PF04715 Anthranilate synthase component I, N terminal region AhaeAN54_014620 PF00155 Aminotransferase class I and II AhaeAN54_014625 PF00815 Histidinol dehydrogenase AhaeAN54_014635 PF04542 Sigma-70 region 2 AhaeAN54_014635 PF08281 Sigma-70, region 4 AhaeAN54_014635 PF12680 SnoaL-like domain AhaeAN54_014640 PF01634 ATP phosphoribosyltransferase AhaeAN54_014645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AhaeAN54_014650 PF01722 BolA-like protein AhaeAN54_014655 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AhaeAN54_014660 PF04552 Sigma-54, DNA binding domain AhaeAN54_014660 PF04963 Sigma-54 factor, core binding domain AhaeAN54_014660 PF00309 Sigma-54 factor, Activator interacting domain (AID) AhaeAN54_014710 PF00795 Carbon-nitrogen hydrolase AhaeAN54_014720 PF02566 OsmC-like protein AhaeAN54_014725 PF00437 Type II/IV secretion system protein AhaeAN54_014745 PF01367 5'-3' exonuclease, C-terminal SAM fold AhaeAN54_014745 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AhaeAN54_014745 PF00476 DNA polymerase family A AhaeAN54_014745 PF01612 3'-5' exonuclease AhaeAN54_014750 PF02325 YGGT family AhaeAN54_014755 PF03807 NADP oxidoreductase coenzyme F420-dependent AhaeAN54_014755 PF14748 Pyrroline-5-carboxylate reductase dimerisation AhaeAN54_014760 PF01171 PP-loop family AhaeAN54_014760 PF09179 TilS substrate binding domain AhaeAN54_014760 PF11734 TilS substrate C-terminal domain AhaeAN54_014765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AhaeAN54_014770 PF02541 Ppx/GppA phosphatase family AhaeAN54_014775 PF00085 Thioredoxin AhaeAN54_014780 PF07498 Rho termination factor, N-terminal domain AhaeAN54_014780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AhaeAN54_014780 PF07497 Rho termination factor, RNA-binding domain AhaeAN54_014790 PF00216 Bacterial DNA-binding protein AhaeAN54_014795 PF03147 Ferredoxin-fold anticodon binding domain AhaeAN54_014795 PF03484 tRNA synthetase B5 domain AhaeAN54_014795 PF03483 B3/4 domain AhaeAN54_014795 PF01588 Putative tRNA binding domain AhaeAN54_014795 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AhaeAN54_014800 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AhaeAN54_014800 PF01409 tRNA synthetases class II core domain (F) AhaeAN54_014815 PF00453 Ribosomal protein L20 AhaeAN54_014820 PF01632 Ribosomal protein L35 AhaeAN54_014825 PF09335 SNARE associated Golgi protein AhaeAN54_014840 PF00043 Glutathione S-transferase, C-terminal domain AhaeAN54_014840 PF02798 Glutathione S-transferase, N-terminal domain AhaeAN54_014850 PF05198 Translation initiation factor IF-3, N-terminal domain AhaeAN54_014850 PF00707 Translation initiation factor IF-3, C-terminal domain AhaeAN54_014855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AhaeAN54_014855 PF03129 Anticodon binding domain AhaeAN54_014855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AhaeAN54_014855 PF02824 TGS domain AhaeAN54_014860 PF13193 AMP-binding enzyme C-terminal domain AhaeAN54_014860 PF00501 AMP-binding enzyme AhaeAN54_014865 PF04751 Protein of unknown function (DUF615) AhaeAN54_014870 PF00381 PTS HPr component phosphorylation site AhaeAN54_014875 PF03668 P-loop ATPase protein family AhaeAN54_014880 PF02569 Pantoate-beta-alanine ligase AhaeAN54_014885 PF02548 Ketopantoate hydroxymethyltransferase AhaeAN54_014890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AhaeAN54_014895 PF12626 Polymerase A arginine-rich C-terminus AhaeAN54_014895 PF01743 Poly A polymerase head domain AhaeAN54_014895 PF12627 Probable RNA and SrmB- binding site of polymerase A AhaeAN54_014905 PF03819 MazG nucleotide pyrophosphohydrolase domain AhaeAN54_014920 PF13737 Transposase DDE domain AhaeAN54_014945 PF04607 Region found in RelA / SpoT proteins AhaeAN54_014945 PF02824 TGS domain AhaeAN54_014945 PF13291 ACT domain AhaeAN54_014950 PF05958 tRNA (Uracil-5-)-methyltransferase AhaeAN54_014960 PF00291 Pyridoxal-phosphate dependent enzyme AhaeAN54_014965 PF01627 Hpt domain AhaeAN54_014965 PF00672 HAMP domain AhaeAN54_014965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_014965 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_014965 PF00072 Response regulator receiver domain AhaeAN54_014965 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AhaeAN54_014970 PF00378 Enoyl-CoA hydratase/isomerase AhaeAN54_014975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AhaeAN54_014975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AhaeAN54_014980 PF01261 Xylose isomerase-like TIM barrel AhaeAN54_014995 PF00106 short chain dehydrogenase AhaeAN54_015000 PF02233 NAD(P) transhydrogenase beta subunit AhaeAN54_015005 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AhaeAN54_015010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AhaeAN54_015010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AhaeAN54_015015 PF09278 MerR, DNA binding AhaeAN54_015015 PF00376 MerR family regulatory protein AhaeAN54_015025 PF07690 Major Facilitator Superfamily AhaeAN54_015030 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AhaeAN54_015040 PF00202 Aminotransferase class-III AhaeAN54_015045 PF00583 Acetyltransferase (GNAT) family AhaeAN54_015050 PF12802 MarR family AhaeAN54_015055 PF03358 NADPH-dependent FMN reductase AhaeAN54_015060 PF01758 Sodium Bile acid symporter family AhaeAN54_015070 PF01022 Bacterial regulatory protein, arsR family AhaeAN54_015075 PF03960 ArsC family AhaeAN54_015085 PF02661 Fic/DOC family AhaeAN54_015085 PF13784 Fic/DOC family N-terminal AhaeAN54_015090 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AhaeAN54_015090 PF11867 Domain of unknown function (DUF3387) AhaeAN54_015090 PF18766 SWI2/SNF2 ATPase AhaeAN54_015100 PF13737 Transposase DDE domain AhaeAN54_015110 PF01420 Type I restriction modification DNA specificity domain AhaeAN54_015115 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AhaeAN54_015115 PF00270 DEAD/DEAH box helicase AhaeAN54_015115 PF17191 RecG wedge domain AhaeAN54_015120 PF02384 N-6 DNA Methylase AhaeAN54_015175 PF13613 Helix-turn-helix of DDE superfamily endonuclease AhaeAN54_015175 PF13359 DDE superfamily endonuclease AhaeAN54_015185 PF13613 Helix-turn-helix of DDE superfamily endonuclease AhaeAN54_015185 PF13359 DDE superfamily endonuclease AhaeAN54_015215 PF00589 Phage integrase family AhaeAN54_015220 PF01207 Dihydrouridine synthase (Dus) AhaeAN54_015230 PF00899 ThiF family AhaeAN54_015240 PF00330 Aconitase family (aconitate hydratase) AhaeAN54_015240 PF00694 Aconitase C-terminal domain AhaeAN54_015245 PF01026 TatD related DNase AhaeAN54_015260 PF00009 Elongation factor Tu GTP binding domain AhaeAN54_015260 PF03144 Elongation factor Tu domain 2 AhaeAN54_015260 PF16658 Class II release factor RF3, C-terminal domain AhaeAN54_015290 PF13737 Transposase DDE domain AhaeAN54_015330 PF13737 Transposase DDE domain AhaeAN54_015340 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AhaeAN54_015340 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AhaeAN54_015345 PF10369 Small subunit of acetolactate synthase AhaeAN54_015350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AhaeAN54_015350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AhaeAN54_015350 PF00205 Thiamine pyrophosphate enzyme, central domain AhaeAN54_015360 PF09334 tRNA synthetases class I (M) AhaeAN54_015360 PF00133 tRNA synthetases class I (I, L, M and V) AhaeAN54_015360 PF13603 Leucyl-tRNA synthetase, Domain 2 AhaeAN54_015360 PF08264 Anticodon-binding domain of tRNA AhaeAN54_015370 PF06144 DNA polymerase III, delta subunit AhaeAN54_015375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AhaeAN54_015380 PF02687 FtsX-like permease family AhaeAN54_015380 PF12704 MacB-like periplasmic core domain AhaeAN54_015380 PF00005 ABC transporter AhaeAN54_015385 PF02321 Outer membrane efflux protein AhaeAN54_015400 PF00665 Integrase core domain AhaeAN54_015400 PF13936 Helix-turn-helix domain AhaeAN54_015425 PF00929 Exonuclease AhaeAN54_015430 PF03193 RsgA GTPase AhaeAN54_015440 PF00462 Glutaredoxin AhaeAN54_015445 PF02556 Preprotein translocase subunit SecB AhaeAN54_015460 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AhaeAN54_015465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AhaeAN54_015465 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AhaeAN54_015475 PF04127 DNA / pantothenate metabolism flavoprotein AhaeAN54_015475 PF02441 Flavoprotein AhaeAN54_015480 PF04002 RadC-like JAB domain AhaeAN54_015485 PF01062 Bestrophin, RFP-TM, chloride channel AhaeAN54_015490 PF02811 PHP domain AhaeAN54_015495 PF04279 Intracellular septation protein A AhaeAN54_015510 PF01266 FAD dependent oxidoreductase AhaeAN54_015510 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AhaeAN54_015520 PF04461 Protein of unknown function (DUF520) AhaeAN54_015535 PF13185 GAF domain AhaeAN54_015540 PF03061 Thioesterase superfamily AhaeAN54_015545 PF00085 Thioredoxin AhaeAN54_015550 PF00561 alpha/beta hydrolase fold AhaeAN54_015555 PF00753 Metallo-beta-lactamase superfamily AhaeAN54_015555 PF04273 Putative phosphatase (DUF442) AhaeAN54_015595 PF01066 CDP-alcohol phosphatidyltransferase AhaeAN54_015600 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AhaeAN54_015620 PF00056 lactate/malate dehydrogenase, NAD binding domain AhaeAN54_015620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AhaeAN54_015630 PF01551 Peptidase family M23 AhaeAN54_015630 PF01464 Transglycosylase SLT domain AhaeAN54_015630 PF10145 Phage-related minor tail protein AhaeAN54_015635 PF01938 TRAM domain AhaeAN54_015635 PF04055 Radical SAM superfamily AhaeAN54_015635 PF00919 Uncharacterized protein family UPF0004 AhaeAN54_015640 PF02562 PhoH-like protein AhaeAN54_015645 PF02130 Uncharacterized protein family UPF0054 AhaeAN54_015655 PF00593 TonB dependent receptor AhaeAN54_015655 PF07715 TonB-dependent Receptor Plug Domain AhaeAN54_015680 PF00303 Thymidylate synthase AhaeAN54_015685 PF00186 Dihydrofolate reductase AhaeAN54_015700 PF01625 Peptide methionine sulfoxide reductase AhaeAN54_015710 PF01618 MotA/TolQ/ExbB proton channel family AhaeAN54_015720 PF01842 ACT domain AhaeAN54_015720 PF00551 Formyl transferase AhaeAN54_015725 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_015725 PF08360 QacR-like protein, C-terminal region AhaeAN54_015730 PF00171 Aldehyde dehydrogenase family AhaeAN54_015735 PF00830 Ribosomal L28 family AhaeAN54_015740 PF00471 Ribosomal protein L33 AhaeAN54_015745 PF00999 Sodium/hydrogen exchanger family AhaeAN54_015745 PF02254 TrkA-N domain AhaeAN54_015765 PF13361 UvrD-like helicase C-terminal domain AhaeAN54_015765 PF00580 UvrD/REP helicase N-terminal domain AhaeAN54_015780 PF01396 Topoisomerase DNA binding C4 zinc finger AhaeAN54_015780 PF01751 Toprim domain AhaeAN54_015780 PF08272 Topoisomerase I zinc-ribbon-like AhaeAN54_015780 PF01131 DNA topoisomerase AhaeAN54_015790 PF01638 HxlR-like helix-turn-helix AhaeAN54_015795 PF00107 Zinc-binding dehydrogenase AhaeAN54_015795 PF08240 Alcohol dehydrogenase GroES-like domain AhaeAN54_015815 PF03279 Bacterial lipid A biosynthesis acyltransferase AhaeAN54_015825 PF02774 Semialdehyde dehydrogenase, dimerisation domain AhaeAN54_015825 PF01118 Semialdehyde dehydrogenase, NAD binding domain AhaeAN54_015845 PF01416 tRNA pseudouridine synthase AhaeAN54_015860 PF01176 Translation initiation factor 1A / IF-1 AhaeAN54_015870 PF00180 Isocitrate/isopropylmalate dehydrogenase AhaeAN54_015880 PF00694 Aconitase C-terminal domain AhaeAN54_015885 PF00330 Aconitase family (aconitate hydratase) AhaeAN54_015895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AhaeAN54_015895 PF03466 LysR substrate binding domain AhaeAN54_015905 PF00293 NUDIX domain AhaeAN54_015910 PF01590 GAF domain AhaeAN54_015910 PF05524 PEP-utilising enzyme, N-terminal AhaeAN54_015910 PF00391 PEP-utilising enzyme, mobile domain AhaeAN54_015910 PF02896 PEP-utilising enzyme, TIM barrel domain AhaeAN54_015920 PF00141 Peroxidase AhaeAN54_015935 PF12706 Beta-lactamase superfamily domain AhaeAN54_015940 PF02798 Glutathione S-transferase, N-terminal domain AhaeAN54_015955 PF01479 S4 domain AhaeAN54_015955 PF00849 RNA pseudouridylate synthase AhaeAN54_015965 PF10150 Ribonuclease E/G family AhaeAN54_015965 PF12111 Polyribonucleotide phosphorylase C terminal AhaeAN54_015965 PF00575 S1 RNA binding domain AhaeAN54_015970 PF00501 AMP-binding enzyme AhaeAN54_015970 PF13193 AMP-binding enzyme C-terminal domain AhaeAN54_015980 PF04055 Radical SAM superfamily AhaeAN54_015980 PF06969 HemN C-terminal domain AhaeAN54_015990 PF01554 MatE AhaeAN54_015995 PF03109 ABC1 family AhaeAN54_016000 PF01197 Ribosomal protein L31 AhaeAN54_016010 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AhaeAN54_016020 PF01613 Flavin reductase like domain AhaeAN54_016030 PF00375 Sodium:dicarboxylate symporter family AhaeAN54_016045 PF03884 DNA gyrase inhibitor YacG AhaeAN54_016050 PF01244 Membrane dipeptidase (Peptidase family M19) AhaeAN54_016055 PF04055 Radical SAM superfamily AhaeAN54_016055 PF13186 Iron-sulfur cluster-binding domain AhaeAN54_016060 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AhaeAN54_016065 PF03070 TENA/THI-4/PQQC family AhaeAN54_016070 PF12706 Beta-lactamase superfamily domain AhaeAN54_016075 PF08042 PqqA family AhaeAN54_016085 PF13737 Transposase DDE domain AhaeAN54_016095 PF00753 Metallo-beta-lactamase superfamily AhaeAN54_016100 PF00762 Ferrochelatase AhaeAN54_016110 PF01177 Asp/Glu/Hydantoin racemase AhaeAN54_016125 PF01206 Sulfurtransferase TusA AhaeAN54_016130 PF00571 CBS domain AhaeAN54_016130 PF03471 Transporter associated domain AhaeAN54_016135 PF00795 Carbon-nitrogen hydrolase AhaeAN54_016145 PF07963 Prokaryotic N-terminal methylation motif AhaeAN54_016145 PF08334 Type II secretion system (T2SS), protein G AhaeAN54_016150 PF00482 Type II secretion system (T2SS), protein F AhaeAN54_016165 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AhaeAN54_016165 PF18074 Primosomal protein N C-terminal domain AhaeAN54_016165 PF00271 Helicase conserved C-terminal domain AhaeAN54_016165 PF00270 DEAD/DEAH box helicase AhaeAN54_016165 PF17764 3′ DNA-binding domain (3′BD) AhaeAN54_016170 PF00999 Sodium/hydrogen exchanger family AhaeAN54_016170 PF02254 TrkA-N domain AhaeAN54_016175 PF01430 Hsp33 protein AhaeAN54_016185 PF01556 DnaJ C terminal domain AhaeAN54_016185 PF00226 DnaJ domain AhaeAN54_016195 PF01544 CorA-like Mg2+ transporter protein AhaeAN54_016200 PF00013 KH domain AhaeAN54_016200 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AhaeAN54_016200 PF01138 3' exoribonuclease family, domain 1 AhaeAN54_016200 PF03725 3' exoribonuclease family, domain 2 AhaeAN54_016200 PF00575 S1 RNA binding domain AhaeAN54_016205 PF00312 Ribosomal protein S15 AhaeAN54_016215 PF13538 UvrD-like helicase C-terminal domain AhaeAN54_016220 PF12705 PD-(D/E)XK nuclease superfamily AhaeAN54_016220 PF00580 UvrD/REP helicase N-terminal domain AhaeAN54_016220 PF13361 UvrD-like helicase C-terminal domain AhaeAN54_016225 PF17946 RecC C-terminal domain AhaeAN54_016235 PF07690 Major Facilitator Superfamily AhaeAN54_016240 PF03976 Polyphosphate kinase 2 (PPK2) AhaeAN54_016250 PF01209 ubiE/COQ5 methyltransferase family AhaeAN54_016260 PF03109 ABC1 family AhaeAN54_016280 PF00528 Binding-protein-dependent transport system inner membrane component AhaeAN54_016285 PF00005 ABC transporter AhaeAN54_016290 PF01494 FAD binding domain AhaeAN54_016295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AhaeAN54_016300 PF01502 Phosphoribosyl-AMP cyclohydrolase AhaeAN54_016315 PF13244 Domain of unknown function (DUF4040) AhaeAN54_016315 PF00361 Proton-conducting membrane transporter AhaeAN54_016315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AhaeAN54_016315 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AhaeAN54_016320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AhaeAN54_016325 PF00361 Proton-conducting membrane transporter AhaeAN54_016335 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AhaeAN54_016360 PF02033 Ribosome-binding factor A AhaeAN54_016365 PF08364 Bacterial translation initiation factor IF-2 associated region AhaeAN54_016365 PF04760 Translation initiation factor IF-2, N-terminal region AhaeAN54_016365 PF11987 Translation-initiation factor 2 AhaeAN54_016365 PF00009 Elongation factor Tu GTP binding domain AhaeAN54_016370 PF00575 S1 RNA binding domain AhaeAN54_016370 PF08529 NusA N-terminal domain AhaeAN54_016370 PF13184 NusA-like KH domain AhaeAN54_016375 PF02576 RimP N-terminal domain AhaeAN54_016375 PF17384 RimP C-terminal SH3 domain AhaeAN54_016390 PF03840 Preprotein translocase SecG subunit AhaeAN54_016395 PF00121 Triosephosphate isomerase AhaeAN54_016405 PF00482 Type II secretion system (T2SS), protein F AhaeAN54_016410 PF06750 Bacterial Peptidase A24 N-terminal domain AhaeAN54_016410 PF01478 Type IV leader peptidase family AhaeAN54_016415 PF01121 Dephospho-CoA kinase AhaeAN54_016430 PF00588 SpoU rRNA Methylase family AhaeAN54_016430 PF08032 RNA 2'-O ribose methyltransferase substrate binding AhaeAN54_016435 PF06865 Pyrimidine/purine nucleoside phosphorylase AhaeAN54_016440 PF02463 RecF/RecN/SMC N terminal domain AhaeAN54_016445 PF02622 Uncharacterized ACR, COG1678 AhaeAN54_016450 PF03652 Holliday junction resolvase AhaeAN54_016455 PF13533 Biotin-lipoyl like AhaeAN54_016475 PF01066 CDP-alcohol phosphatidyltransferase AhaeAN54_016485 PF02151 UvrB/uvrC motif AhaeAN54_016485 PF08459 UvrC Helix-hairpin-helix N-terminal AhaeAN54_016485 PF01541 GIY-YIG catalytic domain AhaeAN54_016500 PF00378 Enoyl-CoA hydratase/isomerase AhaeAN54_016500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AhaeAN54_016500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AhaeAN54_016505 PF02803 Thiolase, C-terminal domain AhaeAN54_016505 PF00108 Thiolase, N-terminal domain AhaeAN54_016530 PF00005 ABC transporter AhaeAN54_016530 PF00664 ABC transporter transmembrane region AhaeAN54_016540 PF01323 DSBA-like thioredoxin domain AhaeAN54_016555 PF00183 Hsp90 protein AhaeAN54_016555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_016565 PF03553 Na+/H+ antiporter family AhaeAN54_016565 PF13726 Na+-H+ antiporter family AhaeAN54_016590 PF00623 RNA polymerase Rpb1, domain 2 AhaeAN54_016590 PF04983 RNA polymerase Rpb1, domain 3 AhaeAN54_016590 PF05000 RNA polymerase Rpb1, domain 4 AhaeAN54_016590 PF04998 RNA polymerase Rpb1, domain 5 AhaeAN54_016590 PF04997 RNA polymerase Rpb1, domain 1 AhaeAN54_016595 PF04563 RNA polymerase beta subunit AhaeAN54_016595 PF04560 RNA polymerase Rpb2, domain 7 AhaeAN54_016595 PF00562 RNA polymerase Rpb2, domain 6 AhaeAN54_016595 PF10385 RNA polymerase beta subunit external 1 domain AhaeAN54_016595 PF04565 RNA polymerase Rpb2, domain 3 AhaeAN54_016595 PF04561 RNA polymerase Rpb2, domain 2 AhaeAN54_016600 PF16320 Ribosomal protein L7/L12 dimerisation domain AhaeAN54_016600 PF00542 Ribosomal protein L7/L12 C-terminal domain AhaeAN54_016605 PF00466 Ribosomal protein L10 AhaeAN54_016610 PF00687 Ribosomal protein L1p/L10e family AhaeAN54_016615 PF00298 Ribosomal protein L11, RNA binding domain AhaeAN54_016615 PF03946 Ribosomal protein L11, N-terminal domain AhaeAN54_016620 PF02357 Transcription termination factor nusG AhaeAN54_016620 PF00467 KOW motif AhaeAN54_016625 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AhaeAN54_016635 PF03143 Elongation factor Tu C-terminal domain AhaeAN54_016635 PF03144 Elongation factor Tu domain 2 AhaeAN54_016635 PF00009 Elongation factor Tu GTP binding domain AhaeAN54_016660 PF00425 chorismate binding enzyme AhaeAN54_016660 PF04715 Anthranilate synthase component I, N terminal region AhaeAN54_016665 PF13419 Haloacid dehalogenase-like hydrolase AhaeAN54_016670 PF16697 Inner membrane component of T3SS, cytoplasmic domain AhaeAN54_016675 PF03958 Bacterial type II/III secretion system short domain AhaeAN54_016675 PF00263 Bacterial type II and III secretion system protein AhaeAN54_016690 PF00816 H-NS histone family AhaeAN54_016715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AhaeAN54_016715 PF03900 Porphobilinogen deaminase, C-terminal domain AhaeAN54_016720 PF00072 Response regulator receiver domain AhaeAN54_016720 PF04397 LytTr DNA-binding domain AhaeAN54_016725 PF07694 5TMR of 5TMR-LYT AhaeAN54_016725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_016725 PF06580 Histidine kinase AhaeAN54_016730 PF00206 Lyase AhaeAN54_016730 PF14698 Argininosuccinate lyase C-terminal AhaeAN54_016735 PF04362 Bacterial Fe(2+) trafficking AhaeAN54_016740 PF01895 PhoU domain AhaeAN54_016745 PF01964 Radical SAM ThiC family AhaeAN54_016745 PF13667 ThiC-associated domain AhaeAN54_016750 PF00293 NUDIX domain AhaeAN54_016755 PF00149 Calcineurin-like phosphoesterase AhaeAN54_016760 PF01258 Prokaryotic dksA/traR C4-type zinc finger AhaeAN54_016765 PF00749 tRNA synthetases class I (E and Q), catalytic domain AhaeAN54_016770 PF01098 Cell cycle protein AhaeAN54_016775 PF02875 Mur ligase family, glutamate ligase domain AhaeAN54_016775 PF08245 Mur ligase middle domain AhaeAN54_016785 PF07670 Nucleoside recognition AhaeAN54_016785 PF07664 Ferrous iron transport protein B C terminus AhaeAN54_016785 PF02421 Ferrous iron transport protein B AhaeAN54_016795 PF00589 Phage integrase family AhaeAN54_016795 PF02899 Phage integrase, N-terminal SAM-like domain AhaeAN54_016800 PF13098 Thioredoxin-like domain AhaeAN54_016800 PF10411 Disulfide bond isomerase protein N-terminus AhaeAN54_016805 PF00742 Homoserine dehydrogenase AhaeAN54_016805 PF01842 ACT domain AhaeAN54_016805 PF03447 Homoserine dehydrogenase, NAD binding domain AhaeAN54_016810 PF00291 Pyridoxal-phosphate dependent enzyme AhaeAN54_016815 PF00768 D-alanyl-D-alanine carboxypeptidase AhaeAN54_016820 PF00072 Response regulator receiver domain AhaeAN54_016820 PF00196 Bacterial regulatory proteins, luxR family AhaeAN54_016825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_016825 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_016830 PF00158 Sigma-54 interaction domain AhaeAN54_016830 PF00072 Response regulator receiver domain AhaeAN54_016830 PF02954 Bacterial regulatory protein, Fis family AhaeAN54_016835 PF13180 PDZ domain AhaeAN54_016835 PF03572 Peptidase family S41 AhaeAN54_016840 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AhaeAN54_016840 PF01676 Metalloenzyme superfamily AhaeAN54_016845 PF03739 Lipopolysaccharide export system permease LptF/LptG AhaeAN54_016850 PF03739 Lipopolysaccharide export system permease LptF/LptG AhaeAN54_016855 PF00883 Cytosol aminopeptidase family, catalytic domain AhaeAN54_016855 PF02789 Cytosol aminopeptidase family, N-terminal domain AhaeAN54_016875 PF00677 Lumazine binding domain AhaeAN54_016880 PF00230 Major intrinsic protein AhaeAN54_016890 PF01872 RibD C-terminal domain AhaeAN54_016890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AhaeAN54_016895 PF03477 ATP cone domain AhaeAN54_016900 PF00909 Ammonium Transporter Family AhaeAN54_016905 PF00543 Nitrogen regulatory protein P-II AhaeAN54_016915 PF13335 Magnesium chelatase, subunit ChlI C-terminal AhaeAN54_016915 PF01078 Magnesium chelatase, subunit ChlI AhaeAN54_016935 PF00916 Sulfate permease family AhaeAN54_016935 PF01740 STAS domain AhaeAN54_016940 PF00582 Universal stress protein family AhaeAN54_016945 PF03960 ArsC family AhaeAN54_016950 PF01022 Bacterial regulatory protein, arsR family AhaeAN54_016960 PF01758 Sodium Bile acid symporter family AhaeAN54_016965 PF03358 NADPH-dependent FMN reductase AhaeAN54_016970 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_016995 PF00665 Integrase core domain AhaeAN54_017005 PF01078 Magnesium chelatase, subunit ChlI AhaeAN54_017005 PF13335 Magnesium chelatase, subunit ChlI C-terminal AhaeAN54_017025 PF00719 Inorganic pyrophosphatase AhaeAN54_017040 PF13193 AMP-binding enzyme C-terminal domain AhaeAN54_017040 PF00501 AMP-binding enzyme AhaeAN54_017045 PF03989 DNA gyrase C-terminal domain, beta-propeller AhaeAN54_017045 PF00521 DNA gyrase/topoisomerase IV, subunit A AhaeAN54_017055 PF03458 UPF0126 domain AhaeAN54_017060 PF02810 SEC-C motif AhaeAN54_017065 PF03741 Integral membrane protein TerC family AhaeAN54_017065 PF03471 Transporter associated domain AhaeAN54_017075 PF03641 Possible lysine decarboxylase AhaeAN54_017085 PF07690 Major Facilitator Superfamily AhaeAN54_017095 PF11798 IMS family HHH motif AhaeAN54_017095 PF11799 impB/mucB/samB family C-terminal domain AhaeAN54_017095 PF00817 impB/mucB/samB family AhaeAN54_017110 PF04055 Radical SAM superfamily AhaeAN54_017110 PF11842 Domain of unknown function (DUF3362) AhaeAN54_017110 PF08497 Radical SAM N-terminal AhaeAN54_017120 PF07690 Major Facilitator Superfamily AhaeAN54_017130 PF00291 Pyridoxal-phosphate dependent enzyme AhaeAN54_017135 PF02690 Na+/Pi-cotransporter AhaeAN54_017165 PF02028 BCCT, betaine/carnitine/choline family transporter AhaeAN54_017185 PF00474 Sodium:solute symporter family AhaeAN54_017190 PF04341 Protein of unknown function, DUF485 AhaeAN54_017195 PF00512 His Kinase A (phospho-acceptor) domain AhaeAN54_017195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AhaeAN54_017215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AhaeAN54_017230 PF00459 Inositol monophosphatase family AhaeAN54_017270 PF08281 Sigma-70, region 4 AhaeAN54_017270 PF00665 Integrase core domain AhaeAN54_017275 PF01695 IstB-like ATP binding protein AhaeAN54_017295 PF01327 Polypeptide deformylase AhaeAN54_017300 PF01476 LysM domain AhaeAN54_017305 PF17782 DprA winged helix domain AhaeAN54_017305 PF02481 DNA recombination-mediator protein A AhaeAN54_017310 PF01300 Telomere recombination AhaeAN54_017320 PF00440 Bacterial regulatory proteins, tetR family AhaeAN54_017325 PF07690 Major Facilitator Superfamily AhaeAN54_017335 PF00255 Glutathione peroxidase AhaeAN54_017365 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AhaeAN54_017370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AhaeAN54_017370 PF02874 ATP synthase alpha/beta family, beta-barrel domain AhaeAN54_017375 PF00231 ATP synthase AhaeAN54_017380 PF00306 ATP synthase alpha/beta chain, C terminal domain AhaeAN54_017380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AhaeAN54_017380 PF02874 ATP synthase alpha/beta family, beta-barrel domain AhaeAN54_017385 PF00213 ATP synthase delta (OSCP) subunit AhaeAN54_017390 PF00430 ATP synthase B/B' CF(0) AhaeAN54_017395 PF00137 ATP synthase subunit C AhaeAN54_017400 PF00119 ATP synthase A chain AhaeAN54_017420 PF00005 ABC transporter AhaeAN54_017425 PF00950 ABC 3 transport family AhaeAN54_017435 PF01810 LysE type translocator AhaeAN54_017440 PF04261 Dyp-type peroxidase family AhaeAN54_017445 PF05746 DALR anticodon binding domain AhaeAN54_017445 PF00750 tRNA synthetases class I (R) AhaeAN54_017445 PF03485 Arginyl tRNA synthetase N terminal domain AhaeAN54_017465 PF05726 Pirin C-terminal cupin domain AhaeAN54_017465 PF02678 Pirin AhaeAN54_017475 PF01613 Flavin reductase like domain AhaeAN54_017480 PF01717 Cobalamin-independent synthase, Catalytic domain AhaeAN54_017480 PF08267 Cobalamin-independent synthase, N-terminal domain AhaeAN54_017495 PF00117 Glutamine amidotransferase class-I AhaeAN54_017495 PF00958 GMP synthase C terminal domain AhaeAN54_017495 PF02540 NAD synthase AhaeAN54_017500 PF04286 Protein of unknown function (DUF445) AhaeAN54_017510 PF07681 DoxX AhaeAN54_017515 PF09335 SNARE associated Golgi protein AhaeAN54_017530 PF13614 AAA domain AhaeAN54_017540 PF01722 BolA-like protein AhaeAN54_017575 PF07120 Protein of unknown function (DUF1376) AhaeAN54_017585 PF00176 SNF2 family N-terminal domain AhaeAN54_017585 PF00271 Helicase conserved C-terminal domain AhaeAN54_017585 PF12419 SNF2 Helicase protein AhaeAN54_017680 PF01661 Macro domain AhaeAN54_017700 PF03389 MobA/MobL family AhaeAN54_017715 PF00239 Resolvase, N terminal domain AhaeAN54_017715 PF02796 Helix-turn-helix domain of resolvase AhaeAN54_017730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AhaeAN54_017765 PF03389 MobA/MobL family AhaeAN54_017795 PF07992 Pyridine nucleotide-disulphide oxidoreductase AhaeAN54_017800 PF00756 Putative esterase AhaeAN54_017815 PF08240 Alcohol dehydrogenase GroES-like domain AhaeAN54_017815 PF00107 Zinc-binding dehydrogenase AhaeAN54_017820 PF02583 Metal-sensitive transcriptional repressor AhaeAN54_017850 PF01425 Amidase AhaeAN54_017865 PF01051 Initiator Replication protein AhaeAN54_017880 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AhaeAN54_017885 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AhaeAN54_017890 PF03432 Relaxase/Mobilisation nuclease domain AhaeAN54_017915 PF01636 Phosphotransferase enzyme family AhaeAN54_017940 PF01443 Viral (Superfamily 1) RNA helicase AhaeAN54_017940 PF03389 MobA/MobL family AhaeAN54_017940 PF17841 BID domain of Bartonella effector protein (Bep) AhaeAN54_018005 PF13614 AAA domain AhaeAN54_018045 PF03743 Bacterial conjugation TrbI-like protein AhaeAN54_018050 PF00437 Type II/IV secretion system protein AhaeAN54_018065 PF10145 Phage-related minor tail protein AhaeAN54_018065 PF01551 Peptidase family M23 AhaeAN54_018065 PF01464 Transglycosylase SLT domain AhaeAN54_018080 PF01551 Peptidase family M23 AhaeAN54_018080 PF01464 Transglycosylase SLT domain AhaeAN54_018080 PF10145 Phage-related minor tail protein AhaeAN54_018105 PF00565 Staphylococcal nuclease homologue AhaeAN54_018120 PF00239 Resolvase, N terminal domain AhaeAN54_018120 PF02796 Helix-turn-helix domain of resolvase AhaeAN54_018140 PF00118 TCP-1/cpn60 chaperonin family AhaeAN54_018145 PF00166 Chaperonin 10 Kd subunit AhaeAN54_018150 PF03091 CutA1 divalent ion tolerance protein AhaeAN54_018155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AhaeAN54_018160 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AhaeAN54_018170 PF00753 Metallo-beta-lactamase superfamily