locus-tag	class	description
AhaeAN59_00005	PF11638	DnaA N-terminal domain
AhaeAN59_00005	PF00308	Bacterial dnaA  protein
AhaeAN59_00005	PF08299	Bacterial dnaA protein helix-turn-helix
AhaeAN59_00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
AhaeAN59_00010	PF02767	DNA polymerase III beta subunit, central domain
AhaeAN59_00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
AhaeAN59_00015	PF02463	RecF/RecN/SMC N terminal domain
AhaeAN59_00020	PF01751	Toprim domain
AhaeAN59_00020	PF00204	DNA gyrase B
AhaeAN59_00020	PF00986	DNA gyrase B subunit, carboxyl terminus
AhaeAN59_00020	PF18053	DNA gyrase B subunit insert domain
AhaeAN59_00020	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_00025	PF09335	SNARE associated Golgi protein
AhaeAN59_00030	PF12848	ABC transporter
AhaeAN59_00030	PF00005	ABC transporter
AhaeAN59_00050	PF01521	Iron-sulphur cluster biosynthesis
AhaeAN59_00055	PF03702	Anhydro-N-acetylmuramic acid kinase
AhaeAN59_00060	PF00579	tRNA synthetases class I (W and Y)
AhaeAN59_00100	PF02080	TrkA-C domain
AhaeAN59_00100	PF03600	Citrate transporter
AhaeAN59_00110	PF00171	Aldehyde dehydrogenase family
AhaeAN59_00115	PF06940	Domain of unknown function (DUF1287)
AhaeAN59_00125	PF00209	Sodium:neurotransmitter symporter family
AhaeAN59_00135	PF01189	16S rRNA methyltransferase RsmB/F
AhaeAN59_00135	PF01029	NusB family
AhaeAN59_00140	PF02911	Formyl transferase, C-terminal domain
AhaeAN59_00140	PF00551	Formyl transferase
AhaeAN59_00145	PF00920	Dehydratase family
AhaeAN59_00160	PF03466	LysR substrate binding domain
AhaeAN59_00160	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_00165	PF00860	Permease family
AhaeAN59_00170	PF00311	Phosphoenolpyruvate carboxylase
AhaeAN59_00180	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_00185	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_00195	PF00226	DnaJ domain
AhaeAN59_00195	PF01556	DnaJ C terminal domain
AhaeAN59_00195	PF00684	DnaJ central domain
AhaeAN59_00200	PF01113	Dihydrodipicolinate reductase, N-terminus
AhaeAN59_00200	PF05173	Dihydrodipicolinate reductase, C-terminus
AhaeAN59_00210	PF07690	Major Facilitator Superfamily
AhaeAN59_00215	PF00248	Aldo/keto reductase family
AhaeAN59_00220	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_00220	PF03466	LysR substrate binding domain
AhaeAN59_00235	PF08240	Alcohol dehydrogenase GroES-like domain
AhaeAN59_00235	PF00107	Zinc-binding dehydrogenase
AhaeAN59_00240	PF03352	Methyladenine glycosylase
AhaeAN59_00255	PF00633	Helix-hairpin-helix motif
AhaeAN59_00255	PF14815	NUDIX domain
AhaeAN59_00255	PF10576	Iron-sulfur binding domain of endonuclease III
AhaeAN59_00255	PF00730	HhH-GPD superfamily base excision DNA repair protein
AhaeAN59_00265	PF07043	Protein of unknown function (DUF1328)
AhaeAN59_00270	PF03692	Putative zinc- or iron-chelating domain
AhaeAN59_00275	PF07995	Glucose / Sorbosone dehydrogenase
AhaeAN59_00280	PF00144	Beta-lactamase
AhaeAN59_00285	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_00285	PF12002	MgsA AAA+ ATPase C terminal
AhaeAN59_00285	PF16193	AAA C-terminal domain
AhaeAN59_00290	PF00892	EamA-like transporter family
AhaeAN59_00295	PF01979	Amidohydrolase family
AhaeAN59_00300	PF01259	SAICAR synthetase
AhaeAN59_00310	PF00701	Dihydrodipicolinate synthetase family
AhaeAN59_00315	PF00857	Isochorismatase family
AhaeAN59_00320	PF01037	Lrp/AsnC ligand binding domain
AhaeAN59_00345	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_00355	PF04851	Type III restriction enzyme, res subunit
AhaeAN59_00360	PF01555	DNA methylase
AhaeAN59_00380	PF13737	Transposase DDE domain
AhaeAN59_00385	PF18623	TnsE C-terminal domain
AhaeAN59_00390	PF15978	Tn7-like transposition protein D
AhaeAN59_00390	PF06527	TniQ
AhaeAN59_00395	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_00395	PF00155	Aminotransferase class I and II
AhaeAN59_00400	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AhaeAN59_00400	PF00117	Glutamine amidotransferase class-I
AhaeAN59_00405	PF00202	Aminotransferase class-III
AhaeAN59_00415	PF01168	Alanine racemase, N-terminal domain
AhaeAN59_00425	PF00701	Dihydrodipicolinate synthetase family
AhaeAN59_00430	PF00596	Class II Aldolase and Adducin N-terminal domain
AhaeAN59_00435	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_00435	PF00155	Aminotransferase class I and II
AhaeAN59_00455	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_00455	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_00455	PF13817	IS66 C-terminal element
AhaeAN59_00455	PF03050	Transposase IS66 family 
AhaeAN59_00480	PF03594	Benzoate membrane transport protein
AhaeAN59_00485	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_00485	PF00155	Aminotransferase class I and II
AhaeAN59_00490	PF13401	AAA domain
AhaeAN59_00490	PF11426	Tn7 transposition regulator TnsC
AhaeAN59_00495	PF00665	Integrase core domain
AhaeAN59_00500	PF08721	TnsA endonuclease C terminal
AhaeAN59_00500	PF08722	TnsA endonuclease N terminal
AhaeAN59_00540	PF02384	N-6 DNA Methylase
AhaeAN59_00540	PF12161	HsdM N-terminal domain
AhaeAN59_00575	PF06527	TniQ
AhaeAN59_00575	PF15978	Tn7-like transposition protein D
AhaeAN59_00580	PF11426	Tn7 transposition regulator TnsC
AhaeAN59_00580	PF13401	AAA domain
AhaeAN59_00585	PF00665	Integrase core domain
AhaeAN59_00590	PF08721	TnsA endonuclease C terminal
AhaeAN59_00590	PF08722	TnsA endonuclease N terminal
AhaeAN59_00595	PF01380	SIS domain
AhaeAN59_00600	PF12804	MobA-like NTP transferase domain
AhaeAN59_00600	PF14602	Hexapeptide repeat of succinyl-transferase
AhaeAN59_00600	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_00605	PF04608	Phosphatidylglycerophosphatase A
AhaeAN59_00610	PF02769	AIR synthase related protein, C-terminal domain
AhaeAN59_00610	PF00586	AIR synthase related protein, N-terminal domain
AhaeAN59_00615	PF01029	NusB family
AhaeAN59_00620	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AhaeAN59_00625	PF00925	GTP cyclohydrolase II
AhaeAN59_00625	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AhaeAN59_00650	PF02580	D-Tyr-tRNA(Tyr) deacylase
AhaeAN59_00655	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AhaeAN59_00655	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
AhaeAN59_00660	PF00581	Rhodanese-like domain
AhaeAN59_00665	PF02666	Phosphatidylserine decarboxylase
AhaeAN59_00680	PF00313	'Cold-shock' DNA-binding domain
AhaeAN59_00685	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_00685	PF03466	LysR substrate binding domain
AhaeAN59_00695	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_00695	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_00695	PF00989	PAS fold
AhaeAN59_00695	PF11808	Phosphate regulon sensor protein PhoR
AhaeAN59_00700	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_00700	PF00072	Response regulator receiver domain
AhaeAN59_00710	PF00106	short chain dehydrogenase
AhaeAN59_00715	PF01554	MatE
AhaeAN59_00720	PF00155	Aminotransferase class I and II
AhaeAN59_00730	PF04286	Protein of unknown function (DUF445)
AhaeAN59_00745	PF04262	Glutamate-cysteine ligase 
AhaeAN59_00750	PF02600	Disulfide bond formation protein DsbB
AhaeAN59_00760	PF05728	Uncharacterised protein family (UPF0227)
AhaeAN59_00765	PF00204	DNA gyrase B
AhaeAN59_00765	PF00986	DNA gyrase B subunit, carboxyl terminus
AhaeAN59_00765	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_00765	PF01751	Toprim domain
AhaeAN59_00780	PF02653	Branched-chain amino acid transport system / permease component
AhaeAN59_00790	PF00005	ABC transporter
AhaeAN59_00790	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AhaeAN59_00795	PF00005	ABC transporter
AhaeAN59_00805	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_00830	PF02683	Cytochrome C biogenesis protein transmembrane region
AhaeAN59_00830	PF11412	Disulphide bond corrector protein DsbC
AhaeAN59_00835	PF00043	Glutathione S-transferase, C-terminal domain
AhaeAN59_00835	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_00850	PF13737	Transposase DDE domain
AhaeAN59_00855	PF00005	ABC transporter
AhaeAN59_00855	PF00664	ABC transporter transmembrane region
AhaeAN59_00860	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_00860	PF17151	Periplasmic sensor domain
AhaeAN59_00865	PF07859	alpha/beta hydrolase fold
AhaeAN59_00875	PF03960	ArsC family
AhaeAN59_00880	PF03372	Endonuclease/Exonuclease/phosphatase family
AhaeAN59_00885	PF00156	Phosphoribosyl transferase domain
AhaeAN59_00895	PF00106	short chain dehydrogenase
AhaeAN59_00910	PF13737	Transposase DDE domain
AhaeAN59_00920	PF01047	MarR family
AhaeAN59_00925	PF00255	Glutathione peroxidase
AhaeAN59_00930	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AhaeAN59_00930	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AhaeAN59_00935	PF04101	Glycosyltransferase family 28 C-terminal domain
AhaeAN59_00935	PF03033	Glycosyltransferase family 28 N-terminal domain
AhaeAN59_00940	PF01225	Mur ligase family, catalytic domain
AhaeAN59_00940	PF08245	Mur ligase middle domain
AhaeAN59_00940	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_00945	PF07478	D-ala D-ala ligase C-terminus
AhaeAN59_00945	PF01820	D-ala D-ala ligase N-terminus
AhaeAN59_00950	PF08478	POTRA domain, FtsQ-type
AhaeAN59_00950	PF03799	Cell division protein FtsQ
AhaeAN59_00955	PF02491	SHS2 domain inserted in FTSA
AhaeAN59_00960	PF00091	Tubulin/FtsZ family, GTPase domain
AhaeAN59_00960	PF12327	FtsZ family, C-terminal domain
AhaeAN59_00965	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AhaeAN59_00980	PF17831	Pyruvate dehydrogenase E1 component middle domain
AhaeAN59_00980	PF00456	Transketolase, thiamine diphosphate binding domain
AhaeAN59_00985	PF00364	Biotin-requiring enzyme
AhaeAN59_00985	PF02817	e3 binding domain
AhaeAN59_00985	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AhaeAN59_01000	PF01169	Uncharacterized protein family UPF0016
AhaeAN59_01005	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_01005	PF00593	TonB dependent receptor
AhaeAN59_01010	PF01613	Flavin reductase like domain
AhaeAN59_01010	PF00258	Flavodoxin
AhaeAN59_01015	PF03692	Putative zinc- or iron-chelating domain
AhaeAN59_01020	PF00478	IMP dehydrogenase / GMP reductase domain
AhaeAN59_01020	PF00571	CBS domain
AhaeAN59_01025	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AhaeAN59_01025	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AhaeAN59_01025	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AhaeAN59_01025	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AhaeAN59_01030	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AhaeAN59_01030	PF01243	Pyridoxamine 5'-phosphate oxidase
AhaeAN59_01035	PF01368	DHH family
AhaeAN59_01035	PF02272	DHHA1 domain
AhaeAN59_01035	PF17768	RecJ OB domain
AhaeAN59_01055	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AhaeAN59_01060	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AhaeAN59_01070	PF00924	Mechanosensitive ion channel
AhaeAN59_01070	PF05552	Conserved TM helix
AhaeAN59_01080	PF00501	AMP-binding enzyme
AhaeAN59_01080	PF16177	Acetyl-coenzyme A synthetase N-terminus
AhaeAN59_01080	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_01085	PF00296	Luciferase-like monooxygenase
AhaeAN59_01090	PF03358	NADPH-dependent FMN reductase
AhaeAN59_01095	PF00072	Response regulator receiver domain
AhaeAN59_01095	PF00196	Bacterial regulatory proteins, luxR family
AhaeAN59_01110	PF00563	EAL domain
AhaeAN59_01110	PF03707	Bacterial signalling protein N terminal repeat
AhaeAN59_01110	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_01120	PF17755	UvrA DNA-binding domain
AhaeAN59_01120	PF17760	UvrA interaction domain
AhaeAN59_01135	PF03070	TENA/THI-4/PQQC family
AhaeAN59_01145	PF07690	Major Facilitator Superfamily
AhaeAN59_01150	PF00436	Single-strand binding protein family
AhaeAN59_01160	PF00324	Amino acid permease
AhaeAN59_01165	PF00155	Aminotransferase class I and II
AhaeAN59_01165	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_01170	PF00202	Aminotransferase class-III
AhaeAN59_01175	PF00171	Aldehyde dehydrogenase family
AhaeAN59_01180	PF00857	Isochorismatase family
AhaeAN59_01185	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_01185	PF03466	LysR substrate binding domain
AhaeAN59_01190	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_01195	PF00857	Isochorismatase family
AhaeAN59_01200	PF02678	Pirin
AhaeAN59_01200	PF05726	Pirin C-terminal cupin domain
AhaeAN59_01205	PF01593	Flavin containing amine oxidoreductase
AhaeAN59_01260	PF13817	IS66 C-terminal element
AhaeAN59_01260	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_01260	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_01260	PF03050	Transposase IS66 family 
AhaeAN59_01285	PF13356	Arm DNA-binding domain
AhaeAN59_01285	PF00589	Phage integrase family
AhaeAN59_01295	PF02705	K+ potassium transporter
AhaeAN59_01330	PF00977	Histidine biosynthesis protein
AhaeAN59_01335	PF01636	Phosphotransferase enzyme family
AhaeAN59_01365	PF01740	STAS domain
AhaeAN59_01365	PF00916	Sulfate permease family
AhaeAN59_01370	PF00977	Histidine biosynthesis protein
AhaeAN59_01380	PF00117	Glutamine amidotransferase class-I
AhaeAN59_01385	PF00475	Imidazoleglycerol-phosphate dehydratase
AhaeAN59_01415	PF13336	Acetyl-CoA hydrolase/transferase C-terminal domain
AhaeAN59_01415	PF02550	Acetyl-CoA hydrolase/transferase N-terminal domain
AhaeAN59_01420	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_01420	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_01420	PF00672	HAMP domain
AhaeAN59_01425	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_01425	PF00072	Response regulator receiver domain
AhaeAN59_01430	PF09371	Tex-like protein N-terminal domain
AhaeAN59_01430	PF00575	S1 RNA binding domain
AhaeAN59_01430	PF16921	Tex protein YqgF-like domain
AhaeAN59_01430	PF17674	HHH domain
AhaeAN59_01455	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_01455	PF03466	LysR substrate binding domain
AhaeAN59_01465	PF13411	MerR HTH family regulatory protein
AhaeAN59_01470	PF00550	Phosphopantetheine attachment site
AhaeAN59_01470	PF07993	Male sterility protein
AhaeAN59_01475	PF00106	short chain dehydrogenase
AhaeAN59_01480	PF01053	Cys/Met metabolism PLP-dependent enzyme
AhaeAN59_01485	PF00005	ABC transporter
AhaeAN59_01485	PF12848	ABC transporter
AhaeAN59_01505	PF04191	Phospholipid methyltransferase 
AhaeAN59_01520	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_01520	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_01525	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_01530	PF01545	Cation efflux family
AhaeAN59_01615	PF00684	DnaJ central domain
AhaeAN59_01615	PF01556	DnaJ C terminal domain
AhaeAN59_01615	PF00226	DnaJ domain
AhaeAN59_01630	PF13737	Transposase DDE domain
AhaeAN59_01665	PF00324	Amino acid permease
AhaeAN59_01680	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AhaeAN59_01705	PF01795	MraW methylase family
AhaeAN59_01715	PF00905	Penicillin binding protein transpeptidase domain
AhaeAN59_01715	PF03717	Penicillin-binding Protein dimerisation domain
AhaeAN59_01720	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_01720	PF08245	Mur ligase middle domain
AhaeAN59_01720	PF01225	Mur ligase family, catalytic domain
AhaeAN59_01725	PF01225	Mur ligase family, catalytic domain
AhaeAN59_01725	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_01725	PF08245	Mur ligase middle domain
AhaeAN59_01730	PF00953	Glycosyl transferase family 4
AhaeAN59_01735	PF13847	Methyltransferase domain
AhaeAN59_01740	PF00912	Transglycosylase
AhaeAN59_01740	PF00905	Penicillin binding protein transpeptidase domain
AhaeAN59_01740	PF17092	Penicillin-binding protein OB-like domain
AhaeAN59_01765	PF11741	AMIN domain
AhaeAN59_01765	PF00263	Bacterial type II and III secretion system protein
AhaeAN59_01765	PF03958	Bacterial type II/III secretion system short domain
AhaeAN59_01765	PF07660	Secretin and TonB N terminus short domain
AhaeAN59_01770	PF01202	Shikimate kinase
AhaeAN59_01775	PF01761	3-dehydroquinate synthase
AhaeAN59_01785	PF01493	GXGXG motif
AhaeAN59_01785	PF01645	Conserved region in glutamate synthase
AhaeAN59_01785	PF04898	Glutamate synthase central domain
AhaeAN59_01785	PF00310	Glutamine amidotransferases class-II
AhaeAN59_01790	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AhaeAN59_01790	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_01810	PF04011	LemA family
AhaeAN59_01815	PF04536	TPM domain
AhaeAN59_01825	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
AhaeAN59_01830	PF01850	PIN domain
AhaeAN59_01835	PF02661	Fic/DOC family
AhaeAN59_01835	PF13784	Fic/DOC family N-terminal
AhaeAN59_01840	PF00114	Pilin (bacterial filament)
AhaeAN59_01840	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_01860	PF05685	Putative restriction endonuclease
AhaeAN59_01865	PF11846	Virulence factor membrane-bound polymerase, C-terminal
AhaeAN59_01865	PF15864	Protein glycosylation ligase
AhaeAN59_01865	PF04932	O-Antigen ligase
AhaeAN59_01870	PF00210	Ferritin-like domain
AhaeAN59_01875	PF04324	BFD-like [2Fe-2S] binding domain
AhaeAN59_01880	PF01042	Endoribonuclease L-PSP
AhaeAN59_01885	PF13291	ACT domain
AhaeAN59_01885	PF02824	TGS domain
AhaeAN59_01885	PF04607	Region found in RelA / SpoT proteins
AhaeAN59_01890	PF01192	RNA polymerase Rpb6 
AhaeAN59_01895	PF00625	Guanylate kinase
AhaeAN59_01900	PF02401	LytB protein
AhaeAN59_01905	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_01965	PF00114	Pilin (bacterial filament)
AhaeAN59_01965	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_01970	PF00886	Ribosomal protein S16
AhaeAN59_01975	PF01782	RimM N-terminal domain
AhaeAN59_01975	PF05239	PRC-barrel domain
AhaeAN59_01980	PF01746	tRNA (Guanine-1)-methyltransferase
AhaeAN59_01985	PF01245	Ribosomal protein L19
AhaeAN59_01990	PF00561	alpha/beta hydrolase fold
AhaeAN59_01995	PF03280	Proteobacterial lipase chaperone protein
AhaeAN59_02000	PF16198	tRNA pseudouridylate synthase B C-terminal domain
AhaeAN59_02000	PF09157	Pseudouridine synthase II TruB, C-terminal
AhaeAN59_02000	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AhaeAN59_02005	PF01925	Sulfite exporter TauE/SafE
AhaeAN59_02015	PF00892	EamA-like transporter family
AhaeAN59_02020	PF00892	EamA-like transporter family
AhaeAN59_02025	PF01551	Peptidase family M23
AhaeAN59_02025	PF10145	Phage-related minor tail protein
AhaeAN59_02025	PF01464	Transglycosylase SLT domain
AhaeAN59_02030	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AhaeAN59_02030	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AhaeAN59_02035	PF01565	FAD binding domain 
AhaeAN59_02035	PF02913	FAD linked oxidases, C-terminal domain
AhaeAN59_02050	PF03992	Antibiotic biosynthesis monooxygenase
AhaeAN59_02055	PF02525	Flavodoxin-like fold
AhaeAN59_02070	PF07690	Major Facilitator Superfamily
AhaeAN59_02075	PF12805	FUSC-like inner membrane protein yccS
AhaeAN59_02080	PF01594	AI-2E family transporter
AhaeAN59_02085	PF13614	AAA domain
AhaeAN59_02095	PF01209	ubiE/COQ5 methyltransferase family
AhaeAN59_02110	PF08241	Methyltransferase domain
AhaeAN59_02135	PF00743	Flavin-binding monooxygenase-like
AhaeAN59_02145	PF06470	SMC proteins Flexible Hinge Domain
AhaeAN59_02145	PF02463	RecF/RecN/SMC N terminal domain
AhaeAN59_02155	PF02092	Glycyl-tRNA synthetase beta subunit
AhaeAN59_02155	PF05746	DALR anticodon binding domain
AhaeAN59_02160	PF02091	Glycyl-tRNA synthetase alpha subunit
AhaeAN59_02180	PF00939	Sodium:sulfate symporter transmembrane region
AhaeAN59_02195	PF04024	PspC domain
AhaeAN59_02205	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_02205	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_02205	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_02205	PF12806	Acetyl-CoA dehydrogenase C-terminal like
AhaeAN59_02215	PF08501	Shikimate dehydrogenase substrate binding domain
AhaeAN59_02215	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
AhaeAN59_02215	PF01488	Shikimate / quinate 5-dehydrogenase
AhaeAN59_02220	PF01850	PIN domain
AhaeAN59_02235	PF00925	GTP cyclohydrolase II
AhaeAN59_02240	PF02779	Transketolase, pyrimidine binding domain
AhaeAN59_02240	PF02780	Transketolase, C-terminal domain
AhaeAN59_02240	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AhaeAN59_02245	PF00459	Inositol monophosphatase family
AhaeAN59_02255	PF00270	DEAD/DEAH box helicase
AhaeAN59_02255	PF03880	DbpA RNA binding domain   
AhaeAN59_02255	PF00271	Helicase conserved C-terminal domain
AhaeAN59_02255	PF12343	Cold shock protein DEAD box A
AhaeAN59_02260	PF00005	ABC transporter
AhaeAN59_02265	PF02405	Permease MlaE
AhaeAN59_02270	PF02470	MlaD protein
AhaeAN59_02275	PF05494	MlaC protein
AhaeAN59_02290	PF01544	CorA-like Mg2+ transporter protein
AhaeAN59_02295	PF03641	Possible lysine decarboxylase
AhaeAN59_02305	PF00156	Phosphoribosyl transferase domain
AhaeAN59_02310	PF00270	DEAD/DEAH box helicase
AhaeAN59_02310	PF17191	RecG wedge domain
AhaeAN59_02310	PF00271	Helicase conserved C-terminal domain
AhaeAN59_02330	PF01553	Acyltransferase
AhaeAN59_02340	PF00375	Sodium:dicarboxylate symporter family
AhaeAN59_02355	PF01926	50S ribosome-binding GTPase
AhaeAN59_02360	PF02082	Transcriptional regulator
AhaeAN59_02365	PF00970	Oxidoreductase FAD-binding domain
AhaeAN59_02365	PF00042	Globin
AhaeAN59_02365	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_02370	PF05872	Bacterial protein of unknown function (DUF853)
AhaeAN59_02375	PF01053	Cys/Met metabolism PLP-dependent enzyme
AhaeAN59_02380	PF00117	Glutamine amidotransferase class-I
AhaeAN59_02385	PF00338	Ribosomal protein S10p/S20e
AhaeAN59_02390	PF00297	Ribosomal protein L3
AhaeAN59_02395	PF00573	Ribosomal protein L4/L1 family
AhaeAN59_02400	PF00276	Ribosomal protein L23
AhaeAN59_02405	PF00181	Ribosomal Proteins L2, RNA binding domain
AhaeAN59_02405	PF03947	Ribosomal Proteins L2, C-terminal domain
AhaeAN59_02410	PF00203	Ribosomal protein S19
AhaeAN59_02415	PF00237	Ribosomal protein L22p/L17e
AhaeAN59_02420	PF00189	Ribosomal protein S3, C-terminal domain
AhaeAN59_02420	PF07650	KH domain
AhaeAN59_02425	PF00252	Ribosomal protein L16p/L10e
AhaeAN59_02430	PF00831	Ribosomal L29 protein
AhaeAN59_02435	PF00366	Ribosomal protein S17
AhaeAN59_02440	PF00238	Ribosomal protein L14p/L23e
AhaeAN59_02445	PF00467	KOW motif
AhaeAN59_02445	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
AhaeAN59_02450	PF00673	ribosomal L5P family C-terminus
AhaeAN59_02450	PF00281	Ribosomal protein L5
AhaeAN59_02455	PF00253	Ribosomal protein S14p/S29e
AhaeAN59_02460	PF00410	Ribosomal protein S8
AhaeAN59_02465	PF00347	Ribosomal protein L6
AhaeAN59_02470	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
AhaeAN59_02475	PF00333	Ribosomal protein S5, N-terminal domain
AhaeAN59_02475	PF03719	Ribosomal protein S5, C-terminal domain
AhaeAN59_02480	PF00327	Ribosomal protein L30p/L7e
AhaeAN59_02485	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
AhaeAN59_02490	PF00344	SecY translocase
AhaeAN59_02495	PF00444	Ribosomal protein L36
AhaeAN59_02500	PF00416	Ribosomal protein S13/S18
AhaeAN59_02505	PF00411	Ribosomal protein S11
AhaeAN59_02510	PF01479	S4 domain
AhaeAN59_02510	PF00163	Ribosomal protein S4/S9 N-terminal domain
AhaeAN59_02515	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AhaeAN59_02515	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AhaeAN59_02515	PF01000	RNA polymerase Rpb3/RpoA insert domain
AhaeAN59_02520	PF01196	Ribosomal protein L17
AhaeAN59_02530	PF00743	Flavin-binding monooxygenase-like
AhaeAN59_02540	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_02540	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_02540	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_02545	PF03937	Flavinator of succinate dehydrogenase
AhaeAN59_02570	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AhaeAN59_02575	PF10077	Uncharacterized protein conserved in bacteria (DUF2314)
AhaeAN59_02595	PF01432	Peptidase family M3
AhaeAN59_02605	PF08206	Ribonuclease B OB domain
AhaeAN59_02605	PF17876	Cold shock domain
AhaeAN59_02605	PF00575	S1 RNA binding domain
AhaeAN59_02605	PF00773	RNB domain
AhaeAN59_02605	PF08461	Ribonuclease R winged-helix domain
AhaeAN59_02635	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AhaeAN59_02640	PF03631	Virulence factor BrkB
AhaeAN59_02645	PF03358	NADPH-dependent FMN reductase
AhaeAN59_02655	PF01790	Prolipoprotein diacylglyceryl transferase
AhaeAN59_02665	PF00245	Alkaline phosphatase
AhaeAN59_02685	PF00902	Sec-independent protein translocase protein (TatC)
AhaeAN59_02690	PF02416	mttA/Hcf106 family
AhaeAN59_02695	PF02416	mttA/Hcf106 family
AhaeAN59_02705	PF01725	Ham1 family
AhaeAN59_02725	PF00561	alpha/beta hydrolase fold
AhaeAN59_02725	PF07021	Methionine biosynthesis protein MetW
AhaeAN59_02730	PF00561	alpha/beta hydrolase fold
AhaeAN59_02735	PF00682	HMGL-like
AhaeAN59_02735	PF08502	LeuA allosteric (dimerisation) domain
AhaeAN59_02740	PF00593	TonB dependent receptor
AhaeAN59_02740	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_02745	PF05697	Bacterial trigger factor protein (TF)
AhaeAN59_02745	PF05698	Bacterial trigger factor protein (TF) C-terminus
AhaeAN59_02745	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_02750	PF00574	Clp protease
AhaeAN59_02755	PF06689	ClpX C4-type zinc finger
AhaeAN59_02755	PF10431	C-terminal, D2-small domain, of ClpB protein 
AhaeAN59_02755	PF07724	AAA domain (Cdc48 subfamily)
AhaeAN59_02770	PF05683	Fumarase C-terminus
AhaeAN59_02770	PF05681	Fumarate hydratase (Fumerase)
AhaeAN59_02775	PF02311	AraC-like ligand binding domain
AhaeAN59_02775	PF12833	Helix-turn-helix domain
AhaeAN59_02795	PF07085	DRTGG domain
AhaeAN59_02795	PF01515	Phosphate acetyl/butaryl transferase
AhaeAN59_02800	PF00871	Acetokinase family
AhaeAN59_02805	PF00171	Aldehyde dehydrogenase family
AhaeAN59_02810	PF12697	Alpha/beta hydrolase family
AhaeAN59_02820	PF00933	Glycosyl hydrolase family 3 N terminal domain
AhaeAN59_02825	PF03572	Peptidase family S41
AhaeAN59_02825	PF00595	PDZ domain
AhaeAN59_02825	PF17804	Tail specific protease N-terminal domain
AhaeAN59_02825	PF11818	C-terminal domain of tail specific protease (DUF3340)
AhaeAN59_02845	PF01926	50S ribosome-binding GTPase
AhaeAN59_02845	PF13167	GTP-binding GTPase N-terminal
AhaeAN59_02845	PF16360	GTP-binding GTPase Middle Region
AhaeAN59_02860	PF13091	PLD-like domain
AhaeAN59_02865	PF10518	TAT (twin-arginine translocation) pathway signal sequence
AhaeAN59_02865	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_02870	PF01389	OmpA-like transmembrane domain
AhaeAN59_02870	PF00691	OmpA family
AhaeAN59_02875	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_02875	PF17152	Periplasmic sensor domain
AhaeAN59_02910	PF01594	AI-2E family transporter
AhaeAN59_02915	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_02915	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_02915	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_02925	PF13302	Acetyltransferase (GNAT) domain
AhaeAN59_02930	PF17932	Tetracyclin repressor-like, C-terminal domain
AhaeAN59_02930	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_02945	PF01039	Carboxyl transferase domain
AhaeAN59_02950	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_02950	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_02950	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_02960	PF00364	Biotin-requiring enzyme
AhaeAN59_02960	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_02960	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_02960	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_02975	PF03372	Endonuclease/Exonuclease/phosphatase family
AhaeAN59_03035	PF04386	Stringent starvation protein B
AhaeAN59_03040	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_03040	PF00043	Glutathione S-transferase, C-terminal domain
AhaeAN59_03045	PF00380	Ribosomal protein S9/S16
AhaeAN59_03050	PF00572	Ribosomal protein L13
AhaeAN59_03060	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AhaeAN59_03065	PF00398	Ribosomal RNA adenine dimethylase
AhaeAN59_03070	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_03075	PF13439	Glycosyltransferase Family 4
AhaeAN59_03075	PF00534	Glycosyl transferases group 1
AhaeAN59_03080	PF01569	PAP2 superfamily
AhaeAN59_03085	PF04384	Iron-sulphur cluster assembly
AhaeAN59_03090	PF00334	Nucleoside diphosphate kinase
AhaeAN59_03095	PF04055	Radical SAM superfamily
AhaeAN59_03105	PF13464	Domain of unknown function (DUF4115)
AhaeAN59_03110	PF04551	GcpE protein
AhaeAN59_03115	PF03129	Anticodon binding domain
AhaeAN59_03115	PF13393	Histidyl-tRNA synthetase
AhaeAN59_03125	PF13360	PQQ-like domain
AhaeAN59_03130	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AhaeAN59_03130	PF01926	50S ribosome-binding GTPase
AhaeAN59_03140	PF07549	SecD/SecF GG Motif
AhaeAN59_03140	PF02355	Protein export membrane protein
AhaeAN59_03145	PF13721	SecD export protein N-terminal TM region
AhaeAN59_03145	PF02355	Protein export membrane protein
AhaeAN59_03145	PF07549	SecD/SecF GG Motif
AhaeAN59_03150	PF02699	Preprotein translocase subunit
AhaeAN59_03155	PF01702	Queuine tRNA-ribosyltransferase
AhaeAN59_03175	PF02547	Queuosine biosynthesis protein
AhaeAN59_03185	PF18698	Histidine kinase sensor domain
AhaeAN59_03185	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_03185	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_03185	PF00672	HAMP domain
AhaeAN59_03190	PF08335	GlnD PII-uridylyltransferase
AhaeAN59_03190	PF03710	Glutamate-ammonia ligase adenylyltransferase
AhaeAN59_03195	PF01063	Amino-transferase class IV
AhaeAN59_03200	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AhaeAN59_03200	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AhaeAN59_03200	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AhaeAN59_03210	PF11380	Stealth protein CR2, conserved region 2
AhaeAN59_03210	PF17103	Stealth protein CR4, conserved region 4
AhaeAN59_03210	PF17101	Stealth protein CR1, conserved region 1
AhaeAN59_03210	PF00534	Glycosyl transferases group 1
AhaeAN59_03210	PF17102	Stealth protein CR3, conserved region 3
AhaeAN59_03240	PF13737	Transposase DDE domain
AhaeAN59_03260	PF01755	Glycosyltransferase family 25 (LPS biosynthesis protein)
AhaeAN59_03280	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_03280	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_03280	PF13817	IS66 C-terminal element
AhaeAN59_03280	PF03050	Transposase IS66 family 
AhaeAN59_03295	PF01336	OB-fold nucleic acid binding domain
AhaeAN59_03295	PF02938	GAD domain
AhaeAN59_03295	PF00152	tRNA synthetases class II (D, K and N) 
AhaeAN59_03305	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_03305	PF00593	TonB dependent receptor
AhaeAN59_03330	PF06146	Phosphate-starvation-inducible E
AhaeAN59_03335	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_03335	PF12806	Acetyl-CoA dehydrogenase C-terminal like
AhaeAN59_03335	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_03335	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_03340	PF12806	Acetyl-CoA dehydrogenase C-terminal like
AhaeAN59_03340	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_03340	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_03340	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_03350	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_03350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_03350	PF00672	HAMP domain
AhaeAN59_03355	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_03355	PF00072	Response regulator receiver domain
AhaeAN59_03390	PF01923	Cobalamin adenosyltransferase
AhaeAN59_03395	PF00593	TonB dependent receptor
AhaeAN59_03395	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_03400	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AhaeAN59_03405	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_03410	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_03435	PF00290	Tryptophan synthase alpha chain
AhaeAN59_03440	PF01039	Carboxyl transferase domain
AhaeAN59_03445	PF08245	Mur ligase middle domain
AhaeAN59_03445	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_03460	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AhaeAN59_03460	PF00578	AhpC/TSA family
AhaeAN59_03465	PF02810	SEC-C motif
AhaeAN59_03465	PF01043	SecA preprotein cross-linking domain
AhaeAN59_03465	PF07517	SecA DEAD-like domain
AhaeAN59_03465	PF07516	SecA Wing and Scaffold domain
AhaeAN59_03480	PF07690	Major Facilitator Superfamily
AhaeAN59_03480	PF00083	Sugar (and other) transporter
AhaeAN59_03485	PF03006	Haemolysin-III related
AhaeAN59_03495	PF13673	Acetyltransferase (GNAT) domain
AhaeAN59_03515	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_03515	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AhaeAN59_03515	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_03520	PF00108	Thiolase, N-terminal domain
AhaeAN59_03520	PF02803	Thiolase, C-terminal domain
AhaeAN59_03535	PF12833	Helix-turn-helix domain
AhaeAN59_03535	PF02311	AraC-like ligand binding domain
AhaeAN59_03540	PF02515	CoA-transferase family III
AhaeAN59_03545	PF04966	Carbohydrate-selective porin, OprB family
AhaeAN59_03550	PF01011	PQQ enzyme repeat
AhaeAN59_03555	PF04717	Type VI secretion system, phage-baseplate injector
AhaeAN59_03555	PF16671	Actin cross-linking domain
AhaeAN59_03565	PF13737	Transposase DDE domain
AhaeAN59_03580	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AhaeAN59_03580	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AhaeAN59_03595	PF02803	Thiolase, C-terminal domain
AhaeAN59_03595	PF00108	Thiolase, N-terminal domain
AhaeAN59_03605	PF13505	Outer membrane protein beta-barrel domain
AhaeAN59_03605	PF00691	OmpA family
AhaeAN59_03610	PF00691	OmpA family
AhaeAN59_03610	PF13505	Outer membrane protein beta-barrel domain
AhaeAN59_03615	PF01139	tRNA-splicing ligase RtcB
AhaeAN59_03620	PF00324	Amino acid permease
AhaeAN59_03625	PF05175	Methyltransferase small domain
AhaeAN59_03625	PF08468	Methyltransferase small domain N-terminal
AhaeAN59_03630	PF00860	Permease family
AhaeAN59_03640	PF01741	Large-conductance mechanosensitive channel, MscL
AhaeAN59_03650	PF03050	Transposase IS66 family 
AhaeAN59_03650	PF13817	IS66 C-terminal element
AhaeAN59_03650	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_03650	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_03665	PF00639	PPIC-type PPIASE domain
AhaeAN59_03665	PF09312	SurA N-terminal domain
AhaeAN59_03670	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AhaeAN59_03670	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AhaeAN59_03670	PF06827	Zinc finger found in FPG and IleRS
AhaeAN59_03675	PF00593	TonB dependent receptor
AhaeAN59_03675	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_03685	PF01571	Aminomethyltransferase folate-binding domain
AhaeAN59_03695	PF08274	PhnA Zinc-Ribbon 
AhaeAN59_03695	PF03831	PhnA domain
AhaeAN59_03700	PF07411	Domain of unknown function (DUF1508)
AhaeAN59_03705	PF04073	Aminoacyl-tRNA editing domain
AhaeAN59_03705	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AhaeAN59_03705	PF03129	Anticodon binding domain
AhaeAN59_03715	PF00072	Response regulator receiver domain
AhaeAN59_03720	PF00072	Response regulator receiver domain
AhaeAN59_03725	PF01584	CheW-like domain
AhaeAN59_03730	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AhaeAN59_03730	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AhaeAN59_03735	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_03735	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_03735	PF07194	P2 response regulator binding domain
AhaeAN59_03735	PF01627	Hpt domain
AhaeAN59_03735	PF02895	Signal transducing histidine kinase, homodimeric domain
AhaeAN59_03735	PF01584	CheW-like domain
AhaeAN59_03735	PF07194	P2 response regulator binding domain
AhaeAN59_03735	PF01627	Hpt domain
AhaeAN59_03735	PF02895	Signal transducing histidine kinase, homodimeric domain
AhaeAN59_03735	PF01584	CheW-like domain
AhaeAN59_03745	PF07687	Peptidase dimerisation domain
AhaeAN59_03745	PF01546	Peptidase family M20/M25/M40
AhaeAN59_03750	PF08085	Entericidin EcnA/B family
AhaeAN59_03760	PF04304	Protein of unknown function (DUF454)
AhaeAN59_03765	PF17969	L,D-transpeptidase C-terminal domain
AhaeAN59_03765	PF03734	L,D-transpeptidase catalytic domain
AhaeAN59_03810	PF00667	FAD binding domain
AhaeAN59_03810	PF00258	Flavodoxin
AhaeAN59_03810	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_03815	PF00155	Aminotransferase class I and II
AhaeAN59_03820	PF02080	TrkA-C domain
AhaeAN59_03820	PF06826	Predicted Permease Membrane Region
AhaeAN59_03830	PF12805	FUSC-like inner membrane protein yccS
AhaeAN59_03835	PF07690	Major Facilitator Superfamily
AhaeAN59_03840	PF00881	Nitroreductase family
AhaeAN59_03850	PF03616	Sodium/glutamate symporter
AhaeAN59_03855	PF01235	Sodium:alanine symporter family
AhaeAN59_03860	PF01734	Patatin-like phospholipase
AhaeAN59_03865	PF05992	SbmA/BacA-like family
AhaeAN59_03880	PF03466	LysR substrate binding domain
AhaeAN59_03880	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_03920	PF02934	GatB/GatE catalytic domain
AhaeAN59_03920	PF02637	GatB domain
AhaeAN59_03935	PF02637	GatB domain
AhaeAN59_03935	PF02934	GatB/GatE catalytic domain
AhaeAN59_03940	PF01425	Amidase
AhaeAN59_03945	PF02686	Glu-tRNAGln amidotransferase C subunit
AhaeAN59_03955	PF04085	rod shape-determining protein MreC
AhaeAN59_03965	PF02545	Maf-like protein
AhaeAN59_03970	PF00575	S1 RNA binding domain
AhaeAN59_03970	PF10150	Ribonuclease E/G family
AhaeAN59_03980	PF03007	Wax ester synthase-like Acyl-CoA acyltransferase domain
AhaeAN59_03980	PF06974	Protein of unknown function (DUF1298)
AhaeAN59_03985	PF01507	Phosphoadenosine phosphosulfate reductase family
AhaeAN59_04005	PF00171	Aldehyde dehydrogenase family
AhaeAN59_04010	PF01569	PAP2 superfamily
AhaeAN59_04020	PF00111	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_04020	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_04025	PF00355	Rieske [2Fe-2S] domain
AhaeAN59_04030	PF07690	Major Facilitator Superfamily
AhaeAN59_04035	PF03573	outer membrane porin, OprD family
AhaeAN59_04045	PF00324	Amino acid permease
AhaeAN59_04050	PF04303	PrpF protein
AhaeAN59_04055	PF00348	Polyprenyl synthetase
AhaeAN59_04060	PF01145	SPFH domain / Band 7 family
AhaeAN59_04070	PF01734	Patatin-like phospholipase
AhaeAN59_04150	PF08019	Phosphoethanolamine transferase EptA/EptB
AhaeAN59_04150	PF00884	Sulfatase
AhaeAN59_04155	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_04155	PF00072	Response regulator receiver domain
AhaeAN59_04160	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_04160	PF08521	Two-component sensor kinase N-terminal
AhaeAN59_04160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_04170	PF00005	ABC transporter
AhaeAN59_04175	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_04180	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_04185	PF00497	Bacterial extracellular solute-binding proteins, family 3
AhaeAN59_04190	PF00909	Ammonium Transporter Family
AhaeAN59_04210	PF08264	Anticodon-binding domain of tRNA
AhaeAN59_04210	PF00133	tRNA synthetases class I (I, L, M and V)
AhaeAN59_04210	PF10458	Valyl tRNA synthetase tRNA binding arm
AhaeAN59_04235	PF01906	Putative heavy-metal-binding
AhaeAN59_04240	PF01906	Putative heavy-metal-binding
AhaeAN59_04245	PF02321	Outer membrane efflux protein
AhaeAN59_04250	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_04255	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_04255	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_04260	PF01569	PAP2 superfamily
AhaeAN59_04270	PF00348	Polyprenyl synthetase
AhaeAN59_04275	PF00829	Ribosomal prokaryotic L21 protein
AhaeAN59_04280	PF01016	Ribosomal L27 protein
AhaeAN59_04285	PF02678	Pirin
AhaeAN59_04285	PF05726	Pirin C-terminal cupin domain
AhaeAN59_04290	PF03548	Outer membrane lipoprotein carrier protein LolA
AhaeAN59_04300	PF02403	Seryl-tRNA synthetase N-terminal domain
AhaeAN59_04300	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AhaeAN59_04305	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AhaeAN59_04305	PF14824	Sirohaem biosynthesis protein central
AhaeAN59_04305	PF10414	Sirohaem synthase dimerisation region
AhaeAN59_04310	PF00588	SpoU rRNA Methylase family
AhaeAN59_04320	PF01638	HxlR-like helix-turn-helix
AhaeAN59_04325	PF03358	NADPH-dependent FMN reductase
AhaeAN59_04330	PF13520	Amino acid permease
AhaeAN59_04335	PF00465	Iron-containing alcohol dehydrogenase 
AhaeAN59_04345	PF03099	Biotin/lipoate A/B protein ligase family
AhaeAN59_04350	PF04359	Protein of unknown function (DUF493)
AhaeAN59_04355	PF04539	Sigma-70 region 3
AhaeAN59_04355	PF04546	Sigma-70, non-essential region
AhaeAN59_04355	PF04542	Sigma-70 region 2 
AhaeAN59_04355	PF03979	Sigma-70 factor, region 1.1
AhaeAN59_04355	PF00140	Sigma-70 factor, region 1.2
AhaeAN59_04355	PF04545	Sigma-70, region 4
AhaeAN59_04375	PF01810	LysE type translocator
AhaeAN59_04380	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_04380	PF03466	LysR substrate binding domain
AhaeAN59_04385	PF05724	Thiopurine S-methyltransferase (TPMT)
AhaeAN59_04390	PF09335	SNARE associated Golgi protein
AhaeAN59_04405	PF00285	Citrate synthase, C-terminal domain
AhaeAN59_04410	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AhaeAN59_04415	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AhaeAN59_04420	PF02910	Fumarate reductase flavoprotein C-term
AhaeAN59_04420	PF00890	FAD binding domain
AhaeAN59_04425	PF13085	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_04435	PF16078	2-oxoglutarate dehydrogenase N-terminus
AhaeAN59_04435	PF16870	2-oxoglutarate dehydrogenase C-terminal
AhaeAN59_04435	PF00676	Dehydrogenase E1 component
AhaeAN59_04435	PF02779	Transketolase, pyrimidine binding domain
AhaeAN59_04440	PF02817	e3 binding domain
AhaeAN59_04440	PF00364	Biotin-requiring enzyme
AhaeAN59_04440	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AhaeAN59_04445	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AhaeAN59_04445	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_04450	PF08442	ATP-grasp domain
AhaeAN59_04450	PF00549	CoA-ligase
AhaeAN59_04455	PF00549	CoA-ligase
AhaeAN59_04455	PF02629	CoA binding domain
AhaeAN59_04460	PF01145	SPFH domain / Band 7 family
AhaeAN59_04460	PF15975	Flotillin
AhaeAN59_04465	PF07290	Protein of unknown function (DUF1449)
AhaeAN59_04470	PF00579	tRNA synthetases class I (W and Y)
AhaeAN59_04475	PF05661	Protein of unknown function (DUF808)
AhaeAN59_04480	PF04228	Putative neutral zinc metallopeptidase
AhaeAN59_04490	PF13737	Transposase DDE domain
AhaeAN59_04515	PF13737	Transposase DDE domain
AhaeAN59_04520	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_04520	PF08245	Mur ligase middle domain
AhaeAN59_04520	PF01225	Mur ligase family, catalytic domain
AhaeAN59_04530	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AhaeAN59_04540	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_04550	PF01272	Transcription elongation factor, GreA/GreB, C-term
AhaeAN59_04550	PF03449	Transcription elongation factor, N-terminal
AhaeAN59_04555	PF02142	MGS-like domain
AhaeAN59_04555	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AhaeAN59_04555	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_04560	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AhaeAN59_04560	PF00117	Glutamine amidotransferase class-I
AhaeAN59_04575	PF01985	CRS1 / YhbY (CRM) domain
AhaeAN59_04580	PF01728	FtsJ-like methyltransferase
AhaeAN59_04585	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_04585	PF17862	AAA+ lid domain
AhaeAN59_04585	PF06480	FtsH Extracellular
AhaeAN59_04585	PF01434	Peptidase family M41
AhaeAN59_04590	PF00809	Pterin binding enzyme
AhaeAN59_04600	PF12034	Domain of unknown function (DUF3520)
AhaeAN59_04600	PF12450	von Willebrand factor 
AhaeAN59_04600	PF00092	von Willebrand factor type A domain
AhaeAN59_04610	PF00561	alpha/beta hydrolase fold
AhaeAN59_04620	PF04973	Nicotinamide mononucleotide transporter
AhaeAN59_04625	PF03009	Glycerophosphoryl diester phosphodiesterase family
AhaeAN59_04635	PF00884	Sulfatase
AhaeAN59_04640	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_04645	PF00571	CBS domain
AhaeAN59_04645	PF01769	Divalent cation transporter
AhaeAN59_04645	PF03448	MgtE intracellular N domain
AhaeAN59_04655	PF01435	Peptidase family M48
AhaeAN59_04660	PF01551	Peptidase family M23
AhaeAN59_04660	PF01464	Transglycosylase SLT domain
AhaeAN59_04660	PF10145	Phage-related minor tail protein
AhaeAN59_04665	PF01171	PP-loop family
AhaeAN59_04675	PF01464	Transglycosylase SLT domain
AhaeAN59_04675	PF00497	Bacterial extracellular solute-binding proteins, family 3
AhaeAN59_04680	PF01272	Transcription elongation factor, GreA/GreB, C-term
AhaeAN59_04680	PF03449	Transcription elongation factor, N-terminal
AhaeAN59_04690	PF00375	Sodium:dicarboxylate symporter family
AhaeAN59_04695	PF03466	LysR substrate binding domain
AhaeAN59_04695	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_04700	PF10415	Fumarase C C-terminus
AhaeAN59_04700	PF00206	Lyase
AhaeAN59_04810	PF00691	OmpA family
AhaeAN59_04810	PF04972	BON domain
AhaeAN59_04825	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_04830	PF03459	TOBE domain
AhaeAN59_04830	PF00005	ABC transporter
AhaeAN59_04840	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AhaeAN59_04845	PF00005	ABC transporter
AhaeAN59_04850	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_04855	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
AhaeAN59_04865	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
AhaeAN59_04865	PF12833	Helix-turn-helix domain
AhaeAN59_04870	PF17048	Neutral/alkaline non-lysosomal ceramidase, C-terminal
AhaeAN59_04870	PF04734	Neutral/alkaline non-lysosomal ceramidase, N-terminal
AhaeAN59_04875	PF04030	D-arabinono-1,4-lactone oxidase 
AhaeAN59_04875	PF01565	FAD binding domain 
AhaeAN59_04885	PF00582	Universal stress protein family
AhaeAN59_04900	PF01327	Polypeptide deformylase
AhaeAN59_04905	PF13737	Transposase DDE domain
AhaeAN59_04915	PF02965	Vitamin B12 dependent methionine synthase, activation domain
AhaeAN59_04915	PF02574	Homocysteine S-methyltransferase
AhaeAN59_04915	PF02607	B12 binding domain
AhaeAN59_04915	PF02310	B12 binding domain
AhaeAN59_04915	PF00809	Pterin binding enzyme
AhaeAN59_04925	PF01384	Phosphate transporter family
AhaeAN59_04935	PF18073	Rubredoxin metal binding domain
AhaeAN59_04940	PF01235	Sodium:alanine symporter family
AhaeAN59_04950	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AhaeAN59_04950	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AhaeAN59_04955	PF01678	Diaminopimelate epimerase
AhaeAN59_04960	PF00561	alpha/beta hydrolase fold
AhaeAN59_04965	PF01810	LysE type translocator
AhaeAN59_04970	PF02899	Phage integrase, N-terminal SAM-like domain
AhaeAN59_04970	PF00589	Phage integrase family
AhaeAN59_04975	PF01012	Electron transfer flavoprotein domain
AhaeAN59_04980	PF01012	Electron transfer flavoprotein domain
AhaeAN59_04980	PF00766	Electron transfer flavoprotein FAD-binding domain
AhaeAN59_04995	PF00521	DNA gyrase/topoisomerase IV, subunit A
AhaeAN59_04995	PF03989	DNA gyrase C-terminal domain, beta-propeller
AhaeAN59_05010	PF13533	Biotin-lipoyl like
AhaeAN59_05020	PF00266	Aminotransferase class-V
AhaeAN59_05030	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
AhaeAN59_05045	PF12704	MacB-like periplasmic core domain
AhaeAN59_05045	PF02687	FtsX-like permease family
AhaeAN59_05050	PF00005	ABC transporter
AhaeAN59_05055	PF13567	Domain of unknown function (DUF4131)
AhaeAN59_05055	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_05055	PF03772	Competence protein
AhaeAN59_05065	PF01343	Peptidase family S49
AhaeAN59_05065	PF06965	Na+/H+ antiporter 1
AhaeAN59_05075	PF00551	Formyl transferase
AhaeAN59_05080	PF00586	AIR synthase related protein, N-terminal domain
AhaeAN59_05080	PF02769	AIR synthase related protein, C-terminal domain
AhaeAN59_05085	PF01594	AI-2E family transporter
AhaeAN59_05090	PF11638	DnaA N-terminal domain
AhaeAN59_05090	PF08299	Bacterial dnaA protein helix-turn-helix
AhaeAN59_05090	PF00308	Bacterial dnaA  protein
AhaeAN59_05125	PF00588	SpoU rRNA Methylase family
AhaeAN59_05125	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AhaeAN59_05130	PF00316	Fructose-1-6-bisphosphatase, N-terminal domain
AhaeAN59_05140	PF00691	OmpA family
AhaeAN59_05145	PF04052	TolB amino-terminal domain
AhaeAN59_05145	PF07676	WD40-like Beta Propeller Repeat
AhaeAN59_05155	PF02472	Biopolymer transport protein ExbD/TolR
AhaeAN59_05160	PF01618	MotA/TolQ/ExbB proton channel family
AhaeAN59_05165	PF03061	Thioesterase superfamily
AhaeAN59_05175	PF17864	RuvB AAA lid domain
AhaeAN59_05175	PF05491	RuvB C-terminal winged helix domain
AhaeAN59_05175	PF05496	Holliday junction DNA helicase RuvB P-loop domain
AhaeAN59_05180	PF07499	RuvA, C-terminal domain
AhaeAN59_05180	PF01330	RuvA N terminal domain
AhaeAN59_05185	PF01966	HD domain
AhaeAN59_05195	PF18076	Formylglycinamide ribonucleotide amidotransferase N-terminal
AhaeAN59_05195	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
AhaeAN59_05195	PF02769	AIR synthase related protein, C-terminal domain
AhaeAN59_05215	PF01784	NIF3 (NGG1p interacting factor 3)
AhaeAN59_05220	PF00881	Nitroreductase family
AhaeAN59_05225	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AhaeAN59_05225	PF02378	Phosphotransferase system, EIIC 
AhaeAN59_05230	PF00294	pfkB family carbohydrate kinase
AhaeAN59_05235	PF02896	PEP-utilising enzyme, TIM barrel domain
AhaeAN59_05235	PF05524	PEP-utilising enzyme, N-terminal
AhaeAN59_05235	PF00381	PTS HPr component phosphorylation site
AhaeAN59_05235	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AhaeAN59_05235	PF00391	PEP-utilising enzyme, mobile domain
AhaeAN59_05240	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_05245	PF00293	NUDIX domain
AhaeAN59_05245	PF01467	Cytidylyltransferase-like
AhaeAN59_05250	PF03466	LysR substrate binding domain
AhaeAN59_05250	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_05255	PF01361	Tautomerase enzyme
AhaeAN59_05275	PF00578	AhpC/TSA family
AhaeAN59_05290	PF06508	Queuosine biosynthesis protein QueC
AhaeAN59_05295	PF04055	Radical SAM superfamily
AhaeAN59_05300	PF14602	Hexapeptide repeat of succinyl-transferase
AhaeAN59_05300	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_05300	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
AhaeAN59_05310	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_05310	PF03466	LysR substrate binding domain
AhaeAN59_05315	PF00005	ABC transporter
AhaeAN59_05315	PF12857	TOBE-like domain
AhaeAN59_05320	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_05325	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_05340	PF01063	Amino-transferase class IV
AhaeAN59_05345	PF02618	YceG-like family
AhaeAN59_05350	PF02223	Thymidylate kinase
AhaeAN59_05360	PF02910	Fumarate reductase flavoprotein C-term
AhaeAN59_05360	PF00890	FAD binding domain
AhaeAN59_05365	PF13180	PDZ domain
AhaeAN59_05375	PF03144	Elongation factor Tu domain 2
AhaeAN59_05375	PF06421	GTP-binding protein LepA C-terminus
AhaeAN59_05375	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_05375	PF00679	Elongation factor G C-terminus
AhaeAN59_05380	PF10502	Signal peptidase, peptidase S26 
AhaeAN59_05390	PF14622	Ribonuclease-III-like
AhaeAN59_05390	PF00035	Double-stranded RNA binding motif
AhaeAN59_05395	PF01926	50S ribosome-binding GTPase
AhaeAN59_05395	PF07650	KH domain
AhaeAN59_05405	PF11967	Recombination protein O N terminal
AhaeAN59_05405	PF02565	Recombination protein O C terminal
AhaeAN59_05410	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AhaeAN59_05415	PF06175	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
AhaeAN59_05435	PF00155	Aminotransferase class I and II
AhaeAN59_05445	PF05922	Peptidase inhibitor I9
AhaeAN59_05445	PF00082	Subtilase family
AhaeAN59_05455	PF05922	Peptidase inhibitor I9
AhaeAN59_05455	PF00082	Subtilase family
AhaeAN59_05460	PF00271	Helicase conserved C-terminal domain
AhaeAN59_05460	PF02151	UvrB/uvrC motif
AhaeAN59_05460	PF12344	Ultra-violet resistance protein B
AhaeAN59_05460	PF17757	UvrB interaction domain
AhaeAN59_05460	PF04851	Type III restriction enzyme, res subunit
AhaeAN59_05475	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AhaeAN59_05475	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AhaeAN59_05495	PF01926	50S ribosome-binding GTPase
AhaeAN59_05495	PF01018	GTP1/OBG
AhaeAN59_05500	PF00696	Amino acid kinase family
AhaeAN59_05500	PF01472	PUA domain
AhaeAN59_05515	PF00005	ABC transporter
AhaeAN59_05515	PF08402	TOBE domain
AhaeAN59_05525	PF07759	Protein of unknown function (DUF1615)
AhaeAN59_05530	PF01207	Dihydrouridine synthase (Dus)
AhaeAN59_05535	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_05535	PF03466	LysR substrate binding domain
AhaeAN59_05540	PF12697	Alpha/beta hydrolase family
AhaeAN59_05545	PF18113	Rubredoxin binding C-terminal domain
AhaeAN59_05545	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_05555	PF00301	Rubredoxin
AhaeAN59_05565	PF00152	tRNA synthetases class II (D, K and N) 
AhaeAN59_05565	PF01336	OB-fold nucleic acid binding domain
AhaeAN59_05570	PF13737	Transposase DDE domain
AhaeAN59_05575	PF14052	Capsule assembly protein Wzi
AhaeAN59_05580	PF01507	Phosphoadenosine phosphosulfate reductase family
AhaeAN59_05585	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_05600	PF00542	Ribosomal protein L7/L12 C-terminal domain
AhaeAN59_05600	PF16320	Ribosomal protein L7/L12 dimerisation domain
AhaeAN59_05605	PF00571	CBS domain
AhaeAN59_05605	PF01595	Cyclin M transmembrane N-terminal domain
AhaeAN59_05605	PF03471	Transporter associated domain
AhaeAN59_05610	PF03466	LysR substrate binding domain
AhaeAN59_05610	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_05615	PF00463	Isocitrate lyase family
AhaeAN59_05620	PF17185	NlpE C-terminal OB domain
AhaeAN59_05620	PF04170	NlpE N-terminal domain
AhaeAN59_05630	PF09190	DALR domain
AhaeAN59_05630	PF01406	tRNA synthetases class I (C) catalytic domain
AhaeAN59_05635	PF01380	SIS domain
AhaeAN59_05635	PF00571	CBS domain
AhaeAN59_05650	PF03968	OstA-like protein
AhaeAN59_05655	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AhaeAN59_05655	PF00005	ABC transporter
AhaeAN59_05660	PF02321	Outer membrane efflux protein
AhaeAN59_05665	PF00005	ABC transporter
AhaeAN59_05665	PF03412	Peptidase C39 family
AhaeAN59_05665	PF00664	ABC transporter transmembrane region
AhaeAN59_05675	PF01205	Uncharacterized protein family UPF0029
AhaeAN59_05680	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_05690	PF01596	O-methyltransferase
AhaeAN59_05700	PF11953	Domain of unknown function (DUF3470)
AhaeAN59_05700	PF00037	4Fe-4S binding domain
AhaeAN59_05710	PF00488	MutS domain V
AhaeAN59_05710	PF05190	MutS family domain IV
AhaeAN59_05710	PF05188	MutS domain II
AhaeAN59_05710	PF01624	MutS domain I
AhaeAN59_05710	PF05192	MutS domain III
AhaeAN59_05725	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_05725	PF03466	LysR substrate binding domain
AhaeAN59_05750	PF01970	Tripartite tricarboxylate transporter TctA family
AhaeAN59_05755	PF13737	Transposase DDE domain
AhaeAN59_05760	PF01970	Tripartite tricarboxylate transporter TctA family
AhaeAN59_05775	PF00717	Peptidase S24-like
AhaeAN59_05780	PF00817	impB/mucB/samB family
AhaeAN59_05780	PF11799	impB/mucB/samB family C-terminal domain
AhaeAN59_05780	PF13438	Domain of unknown function (DUF4113)
AhaeAN59_05790	PF01925	Sulfite exporter TauE/SafE
AhaeAN59_05795	PF03466	LysR substrate binding domain
AhaeAN59_05795	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_05825	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AhaeAN59_05825	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AhaeAN59_05830	PF01553	Acyltransferase
AhaeAN59_05835	PF01435	Peptidase family M48
AhaeAN59_05850	PF09424	Yqey-like protein
AhaeAN59_05855	PF01165	Ribosomal protein S21
AhaeAN59_05860	PF00814	Glycoprotease family
AhaeAN59_05870	PF00892	EamA-like transporter family
AhaeAN59_05905	PF00069	Protein kinase domain
AhaeAN59_05905	PF03793	PASTA domain
AhaeAN59_05935	PF00501	AMP-binding enzyme
AhaeAN59_05935	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_05935	PF00668	Condensation domain
AhaeAN59_05935	PF00550	Phosphopantetheine attachment site
AhaeAN59_05935	PF00975	Thioesterase domain
AhaeAN59_05940	PF00975	Thioesterase domain
AhaeAN59_05940	PF00550	Phosphopantetheine attachment site
AhaeAN59_05940	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_05940	PF00501	AMP-binding enzyme
AhaeAN59_05940	PF00668	Condensation domain
AhaeAN59_05945	PF01032	FecCD transport family
AhaeAN59_05950	PF01032	FecCD transport family
AhaeAN59_05955	PF00005	ABC transporter
AhaeAN59_05970	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_05970	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_05970	PF13817	IS66 C-terminal element
AhaeAN59_05970	PF03050	Transposase IS66 family 
AhaeAN59_05990	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
AhaeAN59_05995	PF00550	Phosphopantetheine attachment site
AhaeAN59_05995	PF00501	AMP-binding enzyme
AhaeAN59_05995	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_05995	PF00975	Thioesterase domain
AhaeAN59_05995	PF00668	Condensation domain
AhaeAN59_06000	PF00501	AMP-binding enzyme
AhaeAN59_06000	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_06005	PF00550	Phosphopantetheine attachment site
AhaeAN59_06005	PF00857	Isochorismatase family
AhaeAN59_06010	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AhaeAN59_06015	PF00664	ABC transporter transmembrane region
AhaeAN59_06015	PF00005	ABC transporter
AhaeAN59_06020	PF00664	ABC transporter transmembrane region
AhaeAN59_06020	PF00005	ABC transporter
AhaeAN59_06025	PF00975	Thioesterase domain
AhaeAN59_06030	PF01648	4'-phosphopantetheinyl transferase superfamily
AhaeAN59_06030	PF17837	4'-phosphopantetheinyl transferase N-terminal domain
AhaeAN59_06035	PF00425	chorismate binding enzyme
AhaeAN59_06040	PF00106	short chain dehydrogenase
AhaeAN59_06045	PF01614	Bacterial transcriptional regulator
AhaeAN59_06045	PF09339	IclR helix-turn-helix domain
AhaeAN59_06050	PF00355	Rieske [2Fe-2S] domain
AhaeAN59_06060	PF00355	Rieske [2Fe-2S] domain
AhaeAN59_06070	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AhaeAN59_06090	PF00206	Lyase
AhaeAN59_06090	PF08328	Adenylosuccinate lyase C-terminal
AhaeAN59_06095	PF04356	Protein of unknown function (DUF489)
AhaeAN59_06105	PF00293	NUDIX domain
AhaeAN59_06115	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_06120	PF00768	D-alanyl-D-alanine carboxypeptidase
AhaeAN59_06120	PF07943	Penicillin-binding protein 5, C-terminal domain
AhaeAN59_06140	PF01975	Survival protein SurE
AhaeAN59_06145	PF01476	LysM domain
AhaeAN59_06145	PF01551	Peptidase family M23
AhaeAN59_06150	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_06150	PF03466	LysR substrate binding domain
AhaeAN59_06155	PF05362	Lon protease (S16) C-terminal proteolytic domain
AhaeAN59_06155	PF13654	AAA domain
AhaeAN59_06160	PF07690	Major Facilitator Superfamily
AhaeAN59_06165	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AhaeAN59_06170	PF13593	SBF-like CPA transporter family (DUF4137)
AhaeAN59_06175	PF01197	Ribosomal protein L31
AhaeAN59_06190	PF04055	Radical SAM superfamily
AhaeAN59_06195	PF01132	Elongation factor P (EF-P) OB domain
AhaeAN59_06195	PF08207	Elongation factor P (EF-P) KOW-like domain
AhaeAN59_06195	PF09285	Elongation factor P, C-terminal
AhaeAN59_06215	PF04328	Selenoprotein, putative 
AhaeAN59_06220	PF07726	ATPase family associated with various cellular activities (AAA)
AhaeAN59_06220	PF17863	AAA lid domain
AhaeAN59_06230	PF13559	Domain of unknown function (DUF4129)
AhaeAN59_06230	PF01841	Transglutaminase-like superfamily
AhaeAN59_06230	PF11992	Domain of unknown function (DUF3488)
AhaeAN59_06250	PF02678	Pirin
AhaeAN59_06250	PF17954	Quercetinase C-terminal cupin domain
AhaeAN59_06255	PF00764	Arginosuccinate synthase
AhaeAN59_06265	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_06265	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AhaeAN59_06275	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_06275	PF03466	LysR substrate binding domain
AhaeAN59_06280	PF07883	Cupin domain
AhaeAN59_06285	PF13417	Glutathione S-transferase, N-terminal domain
AhaeAN59_06290	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AhaeAN59_06295	PF07690	Major Facilitator Superfamily
AhaeAN59_06340	PF00072	Response regulator receiver domain
AhaeAN59_06340	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_06345	PF11412	Disulphide bond corrector protein DsbC
AhaeAN59_06345	PF02683	Cytochrome C biogenesis protein transmembrane region
AhaeAN59_06350	PF08534	Redoxin
AhaeAN59_06365	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_06375	PF01925	Sulfite exporter TauE/SafE
AhaeAN59_06385	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_06385	PF00593	TonB dependent receptor
AhaeAN59_06390	PF04717	Type VI secretion system, phage-baseplate injector
AhaeAN59_06450	PF01979	Amidohydrolase family
AhaeAN59_06460	PF01502	Phosphoribosyl-AMP cyclohydrolase
AhaeAN59_06465	PF02649	Type I GTP cyclohydrolase folE2
AhaeAN59_06480	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AhaeAN59_06480	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AhaeAN59_06485	PF01614	Bacterial transcriptional regulator
AhaeAN59_06485	PF09339	IclR helix-turn-helix domain
AhaeAN59_06490	PF01144	Coenzyme A transferase
AhaeAN59_06495	PF01144	Coenzyme A transferase
AhaeAN59_06500	PF00108	Thiolase, N-terminal domain
AhaeAN59_06500	PF02803	Thiolase, C-terminal domain
AhaeAN59_06505	PF10397	Adenylosuccinate lyase C-terminus
AhaeAN59_06505	PF00206	Lyase
AhaeAN59_06510	PF00561	alpha/beta hydrolase fold
AhaeAN59_06515	PF07690	Major Facilitator Superfamily
AhaeAN59_06520	PF02627	Carboxymuconolactone decarboxylase family
AhaeAN59_06525	PF12391	Protocatechuate 3,4-dioxygenase beta subunit N terminal
AhaeAN59_06525	PF00775	Dioxygenase
AhaeAN59_06530	PF00775	Dioxygenase
AhaeAN59_06535	PF01487	Type I 3-dehydroquinase
AhaeAN59_06540	PF05048	Periplasmic copper-binding protein (NosD)
AhaeAN59_06545	PF04966	Carbohydrate-selective porin, OprB family
AhaeAN59_06550	PF13360	PQQ-like domain
AhaeAN59_06550	PF01011	PQQ enzyme repeat
AhaeAN59_06560	PF00576	HIUase/Transthyretin family
AhaeAN59_06565	PF00860	Permease family
AhaeAN59_06585	PF01494	FAD binding domain
AhaeAN59_06590	PF07729	FCD domain
AhaeAN59_06590	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_06595	PF03561	Allantoicase repeat
AhaeAN59_06600	PF04115	Ureidoglycolate lyase
AhaeAN59_06605	PF14226	non-haem dioxygenase in morphine synthesis N-terminal
AhaeAN59_06605	PF03171	2OG-Fe(II) oxygenase superfamily
AhaeAN59_06615	PF13737	Transposase DDE domain
AhaeAN59_06620	PF09084	NMT1/THI5 like
AhaeAN59_06625	PF00005	ABC transporter
AhaeAN59_06630	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_06635	PF01979	Amidohydrolase family
AhaeAN59_06645	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_06645	PF03466	LysR substrate binding domain
AhaeAN59_06650	PF00355	Rieske [2Fe-2S] domain
AhaeAN59_06655	PF07702	UTRA domain
AhaeAN59_06655	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_06660	PF05962	HutD
AhaeAN59_06665	PF01175	Urocanase Rossmann-like domain
AhaeAN59_06665	PF17392	Urocanase C-terminal domain
AhaeAN59_06665	PF17391	Urocanase N-terminal domain
AhaeAN59_06670	PF00221	Aromatic amino acid lyase
AhaeAN59_06675	PF01979	Amidohydrolase family
AhaeAN59_06680	PF00491	Arginase family
AhaeAN59_06685	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AhaeAN59_06685	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AhaeAN59_06690	PF00155	Aminotransferase class I and II
AhaeAN59_06690	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_06715	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
AhaeAN59_06715	PF12833	Helix-turn-helix domain
AhaeAN59_06735	PF00384	Molybdopterin oxidoreductase
AhaeAN59_06740	PF02634	FdhD/NarQ family
AhaeAN59_06745	PF04261	Dyp-type peroxidase family 
AhaeAN59_06755	PF02321	Outer membrane efflux protein
AhaeAN59_06760	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_06765	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_06765	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_06770	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_06770	PF00072	Response regulator receiver domain
AhaeAN59_06775	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_06775	PF00672	HAMP domain
AhaeAN59_06775	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_06780	PF08212	Lipocalin-like domain
AhaeAN59_06815	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_06815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_06815	PF08521	Two-component sensor kinase N-terminal
AhaeAN59_06820	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_06820	PF00072	Response regulator receiver domain
AhaeAN59_06835	PF17932	Tetracyclin repressor-like, C-terminal domain
AhaeAN59_06835	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_06850	PF00106	short chain dehydrogenase
AhaeAN59_06855	PF00743	Flavin-binding monooxygenase-like
AhaeAN59_06860	PF04072	Leucine carboxyl methyltransferase
AhaeAN59_06865	PF03279	Bacterial lipid A biosynthesis acyltransferase
AhaeAN59_06870	PF03746	LamB/YcsF family
AhaeAN59_06875	PF02682	Carboxyltransferase domain, subdomain C and D
AhaeAN59_06880	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_06880	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_06880	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_06880	PF00364	Biotin-requiring enzyme
AhaeAN59_06885	PF01435	Peptidase family M48
AhaeAN59_06890	PF00027	Cyclic nucleotide-binding domain
AhaeAN59_06890	PF13545	Crp-like helix-turn-helix domain
AhaeAN59_06895	PF02566	OsmC-like protein
AhaeAN59_06905	PF07724	AAA domain (Cdc48 subfamily)
AhaeAN59_06905	PF17871	AAA lid domain
AhaeAN59_06905	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_06905	PF10431	C-terminal, D2-small domain, of ClpB protein 
AhaeAN59_06905	PF02861	Clp amino terminal domain, pathogenicity island component
AhaeAN59_06915	PF02926	THUMP domain
AhaeAN59_06915	PF01170	Putative RNA methylase family UPF0020
AhaeAN59_06915	PF10672	S-adenosylmethionine-dependent methyltransferase
AhaeAN59_06925	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AhaeAN59_06925	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AhaeAN59_06930	PF01979	Amidohydrolase family
AhaeAN59_06945	PF04717	Type VI secretion system, phage-baseplate injector
AhaeAN59_06995	PF00005	ABC transporter
AhaeAN59_07000	PF02110	Hydroxyethylthiazole kinase family
AhaeAN59_07030	PF17432	Domain of unknown function (DUF3458_C) ARM repeats
AhaeAN59_07030	PF01433	Peptidase family M1 domain
AhaeAN59_07030	PF11940	Domain of unknown function (DUF3458) Ig-like fold
AhaeAN59_07035	PF03313	Serine dehydratase alpha chain
AhaeAN59_07035	PF03315	Serine dehydratase beta chain
AhaeAN59_07055	PF06271	RDD family
AhaeAN59_07060	PF02308	MgtC family
AhaeAN59_07070	PF02254	TrkA-N domain
AhaeAN59_07070	PF00999	Sodium/hydrogen exchanger family
AhaeAN59_07075	PF03594	Benzoate membrane transport protein
AhaeAN59_07080	PF01810	LysE type translocator
AhaeAN59_07085	PF00923	Transaldolase/Fructose-6-phosphate aldolase
AhaeAN59_07090	PF03466	LysR substrate binding domain
AhaeAN59_07090	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_07110	PF03461	TRCF domain
AhaeAN59_07110	PF17757	UvrB interaction domain
AhaeAN59_07110	PF00270	DEAD/DEAH box helicase
AhaeAN59_07110	PF00271	Helicase conserved C-terminal domain
AhaeAN59_07110	PF02559	CarD-like/TRCF domain
AhaeAN59_07120	PF00211	Adenylate and Guanylate cyclase catalytic domain
AhaeAN59_07125	PF00111	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_07130	PF00012	Hsp70 protein
AhaeAN59_07135	PF00226	DnaJ domain
AhaeAN59_07135	PF07743	HSCB C-terminal oligomerisation domain
AhaeAN59_07140	PF01521	Iron-sulphur cluster biosynthesis
AhaeAN59_07145	PF01592	NifU-like N terminal domain
AhaeAN59_07150	PF00266	Aminotransferase class-V
AhaeAN59_07155	PF02082	Transcriptional regulator
AhaeAN59_07170	PF00216	Bacterial DNA-binding protein
AhaeAN59_07190	PF02631	RecX family
AhaeAN59_07195	PF00154	recA bacterial DNA recombination protein
AhaeAN59_07200	PF01479	S4 domain
AhaeAN59_07205	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_07210	PF00459	Inositol monophosphatase family
AhaeAN59_07220	PF12561	ToxR activated gene A lipoprotein domain
AhaeAN59_07220	PF00041	Fibronectin type III domain
AhaeAN59_07230	PF01649	Ribosomal protein S20
AhaeAN59_07235	PF13460	NAD(P)H-binding 
AhaeAN59_07240	PF03737	Aldolase/RraA
AhaeAN59_07280	PF00108	Thiolase, N-terminal domain
AhaeAN59_07280	PF02803	Thiolase, C-terminal domain
AhaeAN59_07320	PF07690	Major Facilitator Superfamily
AhaeAN59_07325	PF02525	Flavodoxin-like fold
AhaeAN59_07330	PF03466	LysR substrate binding domain
AhaeAN59_07330	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_07335	PF02545	Maf-like protein
AhaeAN59_07345	PF00162	Phosphoglycerate kinase
AhaeAN59_07360	PF13737	Transposase DDE domain
AhaeAN59_07380	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AhaeAN59_07380	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AhaeAN59_07400	PF01180	Dihydroorotate dehydrogenase
AhaeAN59_07405	PF02674	Colicin V production protein
AhaeAN59_07410	PF00156	Phosphoribosyl transferase domain
AhaeAN59_07450	PF05816	Toxic anion resistance protein (TelA)
AhaeAN59_07460	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_07460	PF13192	Thioredoxin domain
AhaeAN59_07475	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_07480	PF00588	SpoU rRNA Methylase family
AhaeAN59_07485	PF14579	Helix-hairpin-helix motif
AhaeAN59_07485	PF02811	PHP domain
AhaeAN59_07485	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
AhaeAN59_07485	PF07733	Bacterial DNA polymerase III alpha NTPase domain
AhaeAN59_07485	PF01336	OB-fold nucleic acid binding domain
AhaeAN59_07490	PF00710	Asparaginase, N-terminal
AhaeAN59_07490	PF17763	Glutaminase/Asparaginase C-terminal domain
AhaeAN59_07505	PF00155	Aminotransferase class I and II
AhaeAN59_07510	PF01641	SelR domain
AhaeAN59_07515	PF00255	Glutathione peroxidase
AhaeAN59_07520	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_07525	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_07530	PF01037	Lrp/AsnC ligand binding domain
AhaeAN59_07540	PF00155	Aminotransferase class I and II
AhaeAN59_07545	PF08335	GlnD PII-uridylyltransferase
AhaeAN59_07545	PF01909	Nucleotidyltransferase domain
AhaeAN59_07545	PF01966	HD domain
AhaeAN59_07550	PF02222	ATP-grasp domain
AhaeAN59_07565	PF00571	CBS domain
AhaeAN59_07565	PF01595	Cyclin M transmembrane N-terminal domain
AhaeAN59_07570	PF13545	Crp-like helix-turn-helix domain
AhaeAN59_07570	PF00027	Cyclic nucleotide-binding domain
AhaeAN59_07580	PF01926	50S ribosome-binding GTPase
AhaeAN59_07580	PF06071	Protein of unknown function (DUF933)
AhaeAN59_07585	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_07590	PF09383	NIL domain
AhaeAN59_07590	PF00005	ABC transporter
AhaeAN59_07595	PF03180	NLPA lipoprotein
AhaeAN59_07600	PF00296	Luciferase-like monooxygenase
AhaeAN59_07610	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_07610	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_07625	PF01546	Peptidase family M20/M25/M40
AhaeAN59_07625	PF07687	Peptidase dimerisation domain
AhaeAN59_07635	PF07804	HipA-like C-terminal domain
AhaeAN59_07650	PF03883	Peroxide stress protein YaaA
AhaeAN59_07670	PF05690	Thiazole biosynthesis protein ThiG
AhaeAN59_07680	PF04241	Protein of unknown function (DUF423)
AhaeAN59_07685	PF00140	Sigma-70 factor, region 1.2
AhaeAN59_07685	PF04542	Sigma-70 region 2 
AhaeAN59_07685	PF04545	Sigma-70, region 4
AhaeAN59_07695	PF00313	'Cold-shock' DNA-binding domain
AhaeAN59_07700	PF00270	DEAD/DEAH box helicase
AhaeAN59_07700	PF00271	Helicase conserved C-terminal domain
AhaeAN59_07705	PF01116	Fructose-bisphosphate aldolase class-II
AhaeAN59_07710	PF00639	PPIC-type PPIASE domain
AhaeAN59_07710	PF09312	SurA N-terminal domain
AhaeAN59_07715	PF03968	OstA-like protein
AhaeAN59_07715	PF04453	LPS transport system D
AhaeAN59_07720	PF01636	Phosphotransferase enzyme family
AhaeAN59_07725	PF00483	Nucleotidyl transferase
AhaeAN59_07730	PF02527	rRNA small subunit methyltransferase G
AhaeAN59_07735	PF13614	AAA domain
AhaeAN59_07740	PF02195	ParB-like nuclease domain
AhaeAN59_07740	PF17762	HTH domain found in ParB protein
AhaeAN59_07745	PF01618	MotA/TolQ/ExbB proton channel family
AhaeAN59_07755	PF00005	ABC transporter
AhaeAN59_07755	PF00664	ABC transporter transmembrane region
AhaeAN59_07760	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AhaeAN59_07765	PF02348	Cytidylyltransferase
AhaeAN59_07770	PF09115	DNA polymerase III, delta subunit, C terminal
AhaeAN59_07785	PF01026	TatD related DNase
AhaeAN59_07800	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_07800	PF02501	Type II secretion system (T2SS), protein I
AhaeAN59_07805	PF11612	Type II secretion system (T2SS), protein J
AhaeAN59_07805	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_07810	PF03934	Type II secretion system (T2SS), protein K
AhaeAN59_07820	PF03167	Uracil DNA glycosylase superfamily
AhaeAN59_07830	PF14437	MafB19-like deaminase
AhaeAN59_07840	PF02224	Cytidylate kinase
AhaeAN59_07845	PF00575	S1 RNA binding domain
AhaeAN59_07850	PF00216	Bacterial DNA-binding protein
AhaeAN59_07860	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AhaeAN59_07865	PF03956	Lysine exporter LysO
AhaeAN59_07895	PF03969	AFG1-like ATPase
AhaeAN59_07900	PF01274	Malate synthase
AhaeAN59_07945	PF05525	Branched-chain amino acid transport protein
AhaeAN59_07950	PF00557	Metallopeptidase family M24
AhaeAN59_07955	PF03466	LysR substrate binding domain
AhaeAN59_07955	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_07965	PF00462	Glutaredoxin
AhaeAN59_07970	PF00202	Aminotransferase class-III
AhaeAN59_07975	PF01380	SIS domain
AhaeAN59_07975	PF00571	CBS domain
AhaeAN59_08000	PF00448	SRP54-type protein, GTPase domain
AhaeAN59_08000	PF02881	SRP54-type protein, helical bundle domain
AhaeAN59_08030	PF08173	Membrane bound YbgT-like protein
AhaeAN59_08035	PF02322	Cytochrome bd terminal oxidase subunit II
AhaeAN59_08040	PF01654	Cytochrome bd terminal oxidase subunit I
AhaeAN59_08060	PF00294	pfkB family carbohydrate kinase
AhaeAN59_08080	PF05193	Peptidase M16 inactive domain
AhaeAN59_08080	PF00675	Insulinase (Peptidase family M16)
AhaeAN59_08080	PF08367	Peptidase M16C associated
AhaeAN59_08085	PF02253	Phospholipase A1
AhaeAN59_08095	PF02386	Cation transport protein
AhaeAN59_08100	PF02080	TrkA-C domain
AhaeAN59_08100	PF02254	TrkA-N domain
AhaeAN59_08105	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_08105	PF00585	C-terminal regulatory domain of Threonine dehydratase
AhaeAN59_08110	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AhaeAN59_08125	PF00245	Alkaline phosphatase
AhaeAN59_08135	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AhaeAN59_08135	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AhaeAN59_08145	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AhaeAN59_08150	PF17871	AAA lid domain
AhaeAN59_08150	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_08150	PF07724	AAA domain (Cdc48 subfamily)
AhaeAN59_08150	PF10431	C-terminal, D2-small domain, of ClpB protein 
AhaeAN59_08150	PF02861	Clp amino terminal domain, pathogenicity island component
AhaeAN59_08155	PF02694	Uncharacterised BCR, YnfA/UPF0060 family
AhaeAN59_08160	PF00793	DAHP synthetase I family
AhaeAN59_08165	PF12697	Alpha/beta hydrolase family
AhaeAN59_08175	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AhaeAN59_08175	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_08200	PF00117	Glutamine amidotransferase class-I
AhaeAN59_08200	PF06418	CTP synthase N-terminus
AhaeAN59_08205	PF00793	DAHP synthetase I family
AhaeAN59_08210	PF03952	Enolase, N-terminal domain
AhaeAN59_08210	PF00113	Enolase, C-terminal TIM barrel domain
AhaeAN59_08215	PF04977	Septum formation initiator
AhaeAN59_08220	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AhaeAN59_08240	PF04143	Sulphur transport
AhaeAN59_08250	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_08270	PF13091	PLD-like domain
AhaeAN59_08280	PF02583	Metal-sensitive transcriptional repressor
AhaeAN59_08285	PF00107	Zinc-binding dehydrogenase
AhaeAN59_08285	PF08240	Alcohol dehydrogenase GroES-like domain
AhaeAN59_08290	PF01425	Amidase
AhaeAN59_08295	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_08295	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_08295	PF00364	Biotin-requiring enzyme
AhaeAN59_08295	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_08300	PF07729	FCD domain
AhaeAN59_08300	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_08315	PF13737	Transposase DDE domain
AhaeAN59_08325	PF08240	Alcohol dehydrogenase GroES-like domain
AhaeAN59_08325	PF00107	Zinc-binding dehydrogenase
AhaeAN59_08330	PF01965	DJ-1/PfpI family
AhaeAN59_08335	PF02558	Ketopantoate reductase PanE/ApbA
AhaeAN59_08335	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AhaeAN59_08360	PF07690	Major Facilitator Superfamily
AhaeAN59_08385	PF02624	YcaO cyclodehydratase, ATP-ad Mg2+-binding
AhaeAN59_08385	PF18381	YcaO cyclodehydratase C-terminal domain
AhaeAN59_08395	PF00106	short chain dehydrogenase
AhaeAN59_08405	PF01037	Lrp/AsnC ligand binding domain
AhaeAN59_08420	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_08420	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_08420	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_08425	PF01402	Ribbon-helix-helix protein, copG family
AhaeAN59_08425	PF08753	NikR C terminal nickel binding domain
AhaeAN59_08430	PF09084	NMT1/THI5 like
AhaeAN59_08435	PF00005	ABC transporter
AhaeAN59_08440	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_08445	PF08281	Sigma-70, region 4
AhaeAN59_08445	PF04542	Sigma-70 region 2 
AhaeAN59_08475	PF01126	Heme oxygenase
AhaeAN59_08505	PF03466	LysR substrate binding domain
AhaeAN59_08505	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_08510	PF00682	HMGL-like
AhaeAN59_08515	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_08515	PF18140	Propionyl-coenzyme A carboxylase BT domain
AhaeAN59_08515	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_08515	PF00364	Biotin-requiring enzyme
AhaeAN59_08515	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_08520	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_08525	PF01039	Carboxyl transferase domain
AhaeAN59_08530	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_08530	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_08530	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_08535	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_08540	PF00501	AMP-binding enzyme
AhaeAN59_08540	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_08555	PF07690	Major Facilitator Superfamily
AhaeAN59_08560	PF02803	Thiolase, C-terminal domain
AhaeAN59_08560	PF00108	Thiolase, N-terminal domain
AhaeAN59_08565	PF01144	Coenzyme A transferase
AhaeAN59_08570	PF01144	Coenzyme A transferase
AhaeAN59_08575	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_08575	PF03466	LysR substrate binding domain
AhaeAN59_08585	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_08585	PF00593	TonB dependent receptor
AhaeAN59_08630	PF02525	Flavodoxin-like fold
AhaeAN59_08640	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_08645	PF01264	Chorismate synthase
AhaeAN59_08650	PF05175	Methyltransferase small domain
AhaeAN59_08660	PF17862	AAA+ lid domain
AhaeAN59_08660	PF01434	Peptidase family M41
AhaeAN59_08660	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_08670	PF05166	YcgL domain
AhaeAN59_08675	PF00570	HRDC domain
AhaeAN59_08675	PF01612	3'-5' exonuclease
AhaeAN59_08680	PF02132	RecR protein
AhaeAN59_08680	PF13662	Toprim domain
AhaeAN59_08685	PF02575	YbaB/EbfC DNA-binding family
AhaeAN59_08690	PF01053	Cys/Met metabolism PLP-dependent enzyme
AhaeAN59_08700	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AhaeAN59_08700	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AhaeAN59_08725	PF01230	HIT domain
AhaeAN59_08755	PF02684	Lipid-A-disaccharide synthetase
AhaeAN59_08775	PF01925	Sulfite exporter TauE/SafE
AhaeAN59_08780	PF00793	DAHP synthetase I family
AhaeAN59_08790	PF00593	TonB dependent receptor
AhaeAN59_08790	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_08800	PF02654	Cobalamin-5-phosphate synthase
AhaeAN59_08810	PF00300	Histidine phosphatase superfamily (branch 1)
AhaeAN59_08815	PF02277	Phosphoribosyltransferase
AhaeAN59_08820	PF02283	Cobinamide kinase / cobinamide phosphate guanyltransferase
AhaeAN59_08830	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_08840	PF00593	TonB dependent receptor
AhaeAN59_08840	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_08845	PF07690	Major Facilitator Superfamily
AhaeAN59_08860	PF06276	Ferric iron reductase FhuF-like transporter
AhaeAN59_08860	PF04183	IucA / IucC family
AhaeAN59_08865	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
AhaeAN59_08870	PF04183	IucA / IucC family
AhaeAN59_08870	PF06276	Ferric iron reductase FhuF-like transporter
AhaeAN59_08875	PF04073	Aminoacyl-tRNA editing domain
AhaeAN59_08885	PF03109	ABC1 family
AhaeAN59_08890	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_08890	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_08890	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_08895	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_08895	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_08895	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_08900	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_08900	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AhaeAN59_08905	PF00487	Fatty acid desaturase
AhaeAN59_08925	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_08925	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AhaeAN59_08930	PF07977	FabA-like domain
AhaeAN59_08935	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_08935	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
AhaeAN59_08945	PF01103	Surface antigen
AhaeAN59_08945	PF07244	Surface antigen variable number repeat
AhaeAN59_08950	PF02163	Peptidase family M50
AhaeAN59_08950	PF17820	PDZ domain
AhaeAN59_08950	PF13180	PDZ domain
AhaeAN59_08955	PF13288	DXP reductoisomerase C-terminal domain
AhaeAN59_08955	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
AhaeAN59_08955	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AhaeAN59_08965	PF01255	Putative undecaprenyl diphosphate synthase
AhaeAN59_08970	PF01765	Ribosome recycling factor
AhaeAN59_08975	PF00696	Amino acid kinase family
AhaeAN59_08980	PF04055	Radical SAM superfamily
AhaeAN59_08980	PF00919	Uncharacterized protein family UPF0004
AhaeAN59_08980	PF18693	TRAM domain
AhaeAN59_08985	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_08985	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_08985	PF00989	PAS fold
AhaeAN59_08990	PF00158	Sigma-54 interaction domain
AhaeAN59_08990	PF02954	Bacterial regulatory protein, Fis family
AhaeAN59_08990	PF00072	Response regulator receiver domain
AhaeAN59_08995	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_09000	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AhaeAN59_09000	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AhaeAN59_09010	PF02542	YgbB family
AhaeAN59_09025	PF01266	FAD dependent oxidoreductase
AhaeAN59_09035	PF00206	Lyase
AhaeAN59_09035	PF10415	Fumarase C C-terminus
AhaeAN59_09040	PF16363	GDP-mannose 4,6 dehydratase
AhaeAN59_09045	PF02635	DsrE/DsrF-like family
AhaeAN59_09065	PF00892	EamA-like transporter family
AhaeAN59_09070	PF00155	Aminotransferase class I and II
AhaeAN59_09070	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_09075	PF01638	HxlR-like helix-turn-helix
AhaeAN59_09080	PF03454	MoeA C-terminal region (domain IV)
AhaeAN59_09080	PF03453	MoeA N-terminal region (domain I and II)
AhaeAN59_09080	PF00994	Probable molybdopterin binding domain
AhaeAN59_09085	PF00994	Probable molybdopterin binding domain
AhaeAN59_09085	PF01967	MoaC family
AhaeAN59_09090	PF02391	MoaE protein
AhaeAN59_09100	PF06463	Molybdenum Cofactor Synthesis C
AhaeAN59_09100	PF04055	Radical SAM superfamily
AhaeAN59_09105	PF01568	Molydopterin dinucleotide binding domain
AhaeAN59_09105	PF00384	Molybdopterin oxidoreductase
AhaeAN59_09105	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AhaeAN59_09110	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_09115	PF12804	MobA-like NTP transferase domain
AhaeAN59_09120	PF01568	Molydopterin dinucleotide binding domain
AhaeAN59_09120	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AhaeAN59_09120	PF04324	BFD-like [2Fe-2S] binding domain
AhaeAN59_09120	PF00384	Molybdopterin oxidoreductase
AhaeAN59_09125	PF04324	BFD-like [2Fe-2S] binding domain
AhaeAN59_09125	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AhaeAN59_09125	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AhaeAN59_09125	PF18267	Rubredoxin NAD+ reductase C-terminal domain
AhaeAN59_09125	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_09130	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_09130	PF04324	BFD-like [2Fe-2S] binding domain
AhaeAN59_09130	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AhaeAN59_09130	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AhaeAN59_09130	PF13806	Rieske-like [2Fe-2S] domain
AhaeAN59_09130	PF18267	Rubredoxin NAD+ reductase C-terminal domain
AhaeAN59_09135	PF07690	Major Facilitator Superfamily
AhaeAN59_09145	PF00005	ABC transporter
AhaeAN59_09150	PF01220	Dehydroquinase class II
AhaeAN59_09155	PF00364	Biotin-requiring enzyme
AhaeAN59_09160	PF02785	Biotin carboxylase C-terminal domain
AhaeAN59_09160	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AhaeAN59_09160	PF00289	Biotin carboxylase, N-terminal domain
AhaeAN59_09170	PF01425	Amidase
AhaeAN59_09175	PF07690	Major Facilitator Superfamily
AhaeAN59_09175	PF00083	Sugar (and other) transporter
AhaeAN59_09180	PF13737	Transposase DDE domain
AhaeAN59_09185	PF01645	Conserved region in glutamate synthase
AhaeAN59_09200	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AhaeAN59_09200	PF01565	FAD binding domain 
AhaeAN59_09205	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AhaeAN59_09215	PF00465	Iron-containing alcohol dehydrogenase 
AhaeAN59_09220	PF03061	Thioesterase superfamily
AhaeAN59_09225	PF12170	DNA polymerase III tau subunit V interacting with alpha
AhaeAN59_09225	PF12169	DNA polymerase III subunits gamma and tau domain III
AhaeAN59_09225	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
AhaeAN59_09230	PF08007	Cupin superfamily protein
AhaeAN59_09255	PF00916	Sulfate permease family
AhaeAN59_09255	PF01740	STAS domain
AhaeAN59_09260	PF00375	Sodium:dicarboxylate symporter family
AhaeAN59_09275	PF00924	Mechanosensitive ion channel
AhaeAN59_09285	PF00664	ABC transporter transmembrane region
AhaeAN59_09285	PF00005	ABC transporter
AhaeAN59_09295	PF12833	Helix-turn-helix domain
AhaeAN59_09295	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
AhaeAN59_09300	PF01597	Glycine cleavage H-protein
AhaeAN59_09305	PF13737	Transposase DDE domain
AhaeAN59_09315	PF00474	Sodium:solute symporter family
AhaeAN59_09320	PF01037	Lrp/AsnC ligand binding domain
AhaeAN59_09325	PF01619	Proline dehydrogenase
AhaeAN59_09325	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
AhaeAN59_09325	PF14850	DNA-binding domain of Proline dehydrogenase
AhaeAN59_09325	PF00171	Aldehyde dehydrogenase family
AhaeAN59_09330	PF04229	GrpB protein
AhaeAN59_09335	PF05958	tRNA (Uracil-5-)-methyltransferase
AhaeAN59_09345	PF09992	Phosphodiester glycosidase
AhaeAN59_09355	PF09857	Putative toxin of bacterial toxin-antitoxin pair
AhaeAN59_09360	PF13508	Acetyltransferase (GNAT) domain
AhaeAN59_09365	PF04264	YceI-like domain
AhaeAN59_09380	PF02780	Transketolase, C-terminal domain
AhaeAN59_09380	PF00456	Transketolase, thiamine diphosphate binding domain
AhaeAN59_09380	PF02779	Transketolase, pyrimidine binding domain
AhaeAN59_09385	PF02772	S-adenosylmethionine synthetase, central domain
AhaeAN59_09385	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AhaeAN59_09385	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AhaeAN59_09400	PF03891	Domain of unknown function (DUF333)
AhaeAN59_09410	PF00313	'Cold-shock' DNA-binding domain
AhaeAN59_09420	PF00313	'Cold-shock' DNA-binding domain
AhaeAN59_09435	PF02075	Crossover junction endodeoxyribonuclease RuvC
AhaeAN59_09440	PF01256	Carbohydrate kinase
AhaeAN59_09440	PF03853	YjeF-related protein N-terminus
AhaeAN59_09445	PF08331	Domain of unknown function (DUF1730)
AhaeAN59_09450	PF06968	Biotin and Thiamin Synthesis associated domain
AhaeAN59_09450	PF04055	Radical SAM superfamily
AhaeAN59_09465	PF16970	Type-1 fimbrial protein, A
AhaeAN59_09470	PF02753	Pili assembly chaperone PapD, C-terminal domain
AhaeAN59_09470	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AhaeAN59_09475	PF13954	PapC N-terminal domain
AhaeAN59_09475	PF00577	Outer membrane usher protein
AhaeAN59_09475	PF13953	PapC C-terminal domain
AhaeAN59_09480	PF00419	Fimbrial protein
AhaeAN59_09505	PF01553	Acyltransferase
AhaeAN59_09510	PF01709	Transcriptional regulator
AhaeAN59_09525	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AhaeAN59_09530	PF00800	Prephenate dehydratase
AhaeAN59_09530	PF01817	Chorismate mutase type II
AhaeAN59_09530	PF01842	ACT domain
AhaeAN59_09540	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_09540	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_09540	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_09545	PF02885	Glycosyl transferase family, helical bundle domain
AhaeAN59_09545	PF00591	Glycosyl transferase family, a/b domain
AhaeAN59_09565	PF04717	Type VI secretion system, phage-baseplate injector
AhaeAN59_09570	PF07023	Protein of unknown function (DUF1315)
AhaeAN59_09575	PF01513	ATP-NAD kinase
AhaeAN59_09580	PF00912	Transglycosylase
AhaeAN59_09580	PF00905	Penicillin binding protein transpeptidase domain
AhaeAN59_09580	PF14814	Bifunctional transglycosylase second domain
AhaeAN59_09590	PF00293	NUDIX domain
AhaeAN59_09600	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_09600	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_09600	PF08521	Two-component sensor kinase N-terminal
AhaeAN59_09605	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_09605	PF00072	Response regulator receiver domain
AhaeAN59_09615	PF00437	Type II/IV secretion system protein
AhaeAN59_09620	PF01980	tRNA-methyltransferase O
AhaeAN59_09620	PF18389	TrmO C-terminal domain
AhaeAN59_09625	PF00970	Oxidoreductase FAD-binding domain
AhaeAN59_09625	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_09650	PF04284	Protein of unknown function (DUF441)
AhaeAN59_09655	PF03466	LysR substrate binding domain
AhaeAN59_09655	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_09660	PF02677	Epoxyqueuosine reductase QueH
AhaeAN59_09670	PF07690	Major Facilitator Superfamily
AhaeAN59_09675	PF01497	Periplasmic binding protein
AhaeAN59_09680	PF00005	ABC transporter
AhaeAN59_09685	PF01032	FecCD transport family
AhaeAN59_09690	PF01032	FecCD transport family
AhaeAN59_09700	PF00027	Cyclic nucleotide-binding domain
AhaeAN59_09700	PF00520	Ion transport protein
AhaeAN59_09705	PF00939	Sodium:sulfate symporter transmembrane region
AhaeAN59_09715	PF00330	Aconitase family (aconitate hydratase)
AhaeAN59_09715	PF06434	Aconitate hydratase 2 N-terminus
AhaeAN59_09715	PF11791	Aconitate B N-terminal domain
AhaeAN59_09730	PF01103	Surface antigen
AhaeAN59_09730	PF07244	Surface antigen variable number repeat
AhaeAN59_09730	PF17243	POTRA domain TamA domain 1
AhaeAN59_09735	PF07690	Major Facilitator Superfamily
AhaeAN59_09740	PF03232	Ubiquinone biosynthesis protein COQ7
AhaeAN59_09755	PF02152	Dihydroneopterin aldolase
AhaeAN59_09760	PF03109	ABC1 family
AhaeAN59_09765	PF00899	ThiF family
AhaeAN59_09775	PF03280	Proteobacterial lipase chaperone protein
AhaeAN59_09780	PF00561	alpha/beta hydrolase fold
AhaeAN59_09785	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
AhaeAN59_09785	PF12833	Helix-turn-helix domain
AhaeAN59_09790	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AhaeAN59_09790	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AhaeAN59_09795	PF00106	short chain dehydrogenase
AhaeAN59_09800	PF02311	AraC-like ligand binding domain
AhaeAN59_09800	PF12833	Helix-turn-helix domain
AhaeAN59_09810	PF13847	Methyltransferase domain
AhaeAN59_09810	PF17827	PrmC N-terminal domain
AhaeAN59_09815	PF03462	PCRF domain
AhaeAN59_09815	PF00472	RF-1 domain
AhaeAN59_09830	PF00464	Serine hydroxymethyltransferase
AhaeAN59_09870	PF06736	Protein of unknown function (DUF1211)
AhaeAN59_09905	PF01979	Amidohydrolase family
AhaeAN59_09905	PF13382	Adenine deaminase C-terminal domain
AhaeAN59_09915	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_09915	PF03466	LysR substrate binding domain
AhaeAN59_09920	PF00005	ABC transporter
AhaeAN59_09925	PF01061	ABC-2 type transporter
AhaeAN59_09930	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
AhaeAN59_09930	PF14489	QueF-like protein
AhaeAN59_09940	PF01098	Cell cycle protein
AhaeAN59_09945	PF13406	Transglycosylase SLT domain
AhaeAN59_09950	PF03330	Lytic transglycolase
AhaeAN59_09950	PF05036	Sporulation related domain
AhaeAN59_09965	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AhaeAN59_09965	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_09970	PF04055	Radical SAM superfamily
AhaeAN59_09980	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AhaeAN59_09980	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
AhaeAN59_09985	PF00271	Helicase conserved C-terminal domain
AhaeAN59_09985	PF04408	Helicase associated domain (HA2)
AhaeAN59_09985	PF00270	DEAD/DEAH box helicase
AhaeAN59_09985	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
AhaeAN59_09985	PF11898	Domain of unknown function (DUF3418)
AhaeAN59_09990	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AhaeAN59_09990	PF00578	AhpC/TSA family
AhaeAN59_10000	PF00487	Fatty acid desaturase
AhaeAN59_10010	PF01596	O-methyltransferase
AhaeAN59_10020	PF13192	Thioredoxin domain
AhaeAN59_10020	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_10030	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_10030	PF00043	Glutathione S-transferase, C-terminal domain
AhaeAN59_10040	PF02390	Putative methyltransferase 
AhaeAN59_10055	PF14493	Helix-turn-helix domain
AhaeAN59_10055	PF05970	PIF1-like helicase
AhaeAN59_10065	PF13520	Amino acid permease
AhaeAN59_10070	PF06751	Ethanolamine ammonia lyase large subunit (EutB)
AhaeAN59_10075	PF05985	Ethanolamine ammonia-lyase light chain (EutC)
AhaeAN59_10080	PF00117	Glutamine amidotransferase class-I
AhaeAN59_10080	PF00958	GMP synthase C terminal domain
AhaeAN59_10080	PF02540	NAD synthase
AhaeAN59_10085	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
AhaeAN59_10085	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AhaeAN59_10090	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AhaeAN59_10095	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_10100	PF00881	Nitroreductase family
AhaeAN59_10105	PF02525	Flavodoxin-like fold
AhaeAN59_10120	PF17209	Hfq protein
AhaeAN59_10130	PF01119	DNA mismatch repair protein, C-terminal domain
AhaeAN59_10130	PF08676	MutL C terminal dimerisation domain
AhaeAN59_10135	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
AhaeAN59_10140	PF00849	RNA pseudouridylate synthase
AhaeAN59_10140	PF01479	S4 domain
AhaeAN59_10150	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_10155	PF01479	S4 domain
AhaeAN59_10155	PF00849	RNA pseudouridylate synthase
AhaeAN59_10165	PF00296	Luciferase-like monooxygenase
AhaeAN59_10170	PF00563	EAL domain
AhaeAN59_10170	PF03707	Bacterial signalling protein N terminal repeat
AhaeAN59_10170	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_10175	PF03618	Kinase/pyrophosphorylase
AhaeAN59_10180	PF02896	PEP-utilising enzyme, TIM barrel domain
AhaeAN59_10180	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AhaeAN59_10180	PF00391	PEP-utilising enzyme, mobile domain
AhaeAN59_10190	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AhaeAN59_10190	PF06481	COX Aromatic Rich Motif
AhaeAN59_10195	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AhaeAN59_10200	PF00510	Cytochrome c oxidase subunit III
AhaeAN59_10205	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
AhaeAN59_10210	PF01040	UbiA prenyltransferase family
AhaeAN59_10215	PF01250	Ribosomal protein S6
AhaeAN59_10220	PF01084	Ribosomal protein S18
AhaeAN59_10225	PF01281	Ribosomal protein L9, N-terminal domain
AhaeAN59_10225	PF03948	Ribosomal protein L9, C-terminal domain
AhaeAN59_10230	PF02525	Flavodoxin-like fold
AhaeAN59_10235	PF01638	HxlR-like helix-turn-helix
AhaeAN59_10240	PF00772	DnaB-like helicase N terminal domain
AhaeAN59_10240	PF03796	DnaB-like helicase C terminal domain
AhaeAN59_10245	PF00842	Alanine racemase, C-terminal domain
AhaeAN59_10245	PF01168	Alanine racemase, N-terminal domain
AhaeAN59_10260	PF08379	Bacterial transglutaminase-like N-terminal region
AhaeAN59_10260	PF01841	Transglutaminase-like superfamily
AhaeAN59_10290	PF00709	Adenylosuccinate synthetase
AhaeAN59_10295	PF13393	Histidyl-tRNA synthetase
AhaeAN59_10305	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AhaeAN59_10305	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AhaeAN59_10310	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AhaeAN59_10310	PF01411	tRNA synthetases class II (A)
AhaeAN59_10310	PF02272	DHHA1 domain
AhaeAN59_10315	PF13840	ACT domain 
AhaeAN59_10315	PF00696	Amino acid kinase family
AhaeAN59_10315	PF01842	ACT domain
AhaeAN59_10320	PF02599	Global regulator protein family
AhaeAN59_10325	PF01351	Ribonuclease HII
AhaeAN59_10335	PF01292	Prokaryotic cytochrome b561
AhaeAN59_10340	PF00962	Adenosine/AMP deaminase
AhaeAN59_10345	PF00860	Permease family
AhaeAN59_10380	PF12833	Helix-turn-helix domain
AhaeAN59_10380	PF02311	AraC-like ligand binding domain
AhaeAN59_10395	PF00893	Small Multidrug Resistance protein
AhaeAN59_10400	PF01134	Glucose inhibited division protein A
AhaeAN59_10400	PF13932	GidA associated domain
AhaeAN59_10425	PF02954	Bacterial regulatory protein, Fis family
AhaeAN59_10430	PF01808	AICARFT/IMPCHase bienzyme
AhaeAN59_10430	PF02142	MGS-like domain
AhaeAN59_10435	PF02844	Phosphoribosylglycinamide synthetase, N domain
AhaeAN59_10435	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AhaeAN59_10435	PF02843	Phosphoribosylglycinamide synthetase, C domain
AhaeAN59_10440	PF03180	NLPA lipoprotein
AhaeAN59_10445	PF09383	NIL domain
AhaeAN59_10445	PF00005	ABC transporter
AhaeAN59_10450	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_10465	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_10465	PF16123	Hydroxyacylglutathione hydrolase C-terminus
AhaeAN59_10475	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AhaeAN59_10475	PF05221	S-adenosyl-L-homocysteine hydrolase
AhaeAN59_10480	PF02219	Methylenetetrahydrofolate reductase
AhaeAN59_10485	PF04452	RNA methyltransferase
AhaeAN59_10490	PF03707	Bacterial signalling protein N terminal repeat
AhaeAN59_10490	PF00563	EAL domain
AhaeAN59_10490	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_10495	PF03949	Malic enzyme, NAD binding domain
AhaeAN59_10495	PF00390	Malic enzyme, N-terminal domain
AhaeAN59_10495	PF01515	Phosphate acetyl/butaryl transferase
AhaeAN59_10500	PF01743	Poly A polymerase head domain
AhaeAN59_10500	PF12627	Probable RNA and SrmB- binding site of polymerase A
AhaeAN59_10510	PF00889	Elongation factor TS
AhaeAN59_10515	PF00318	Ribosomal protein S2
AhaeAN59_10520	PF00557	Metallopeptidase family M24
AhaeAN59_10530	PF07690	Major Facilitator Superfamily
AhaeAN59_10540	PF13180	PDZ domain
AhaeAN59_10545	PF01784	NIF3 (NGG1p interacting factor 3)
AhaeAN59_10550	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AhaeAN59_10550	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AhaeAN59_10555	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AhaeAN59_10555	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AhaeAN59_10590	PF01040	UbiA prenyltransferase family
AhaeAN59_10595	PF04345	Chorismate lyase
AhaeAN59_10600	PF03951	Glutamine synthetase, beta-Grasp domain
AhaeAN59_10600	PF00120	Glutamine synthetase, catalytic domain
AhaeAN59_10605	PF00117	Glutamine amidotransferase class-I
AhaeAN59_10615	PF00111	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_10615	PF03476	MOSC N-terminal beta barrel domain
AhaeAN59_10615	PF03473	MOSC domain
AhaeAN59_10620	PF00591	Glycosyl transferase family, a/b domain
AhaeAN59_10620	PF02885	Glycosyl transferase family, helical bundle domain
AhaeAN59_10625	PF00218	Indole-3-glycerol phosphate synthase
AhaeAN59_10640	PF01227	GTP cyclohydrolase I
AhaeAN59_10660	PF05675	Protein of unknown function (DUF817)
AhaeAN59_10665	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AhaeAN59_10675	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_10675	PF00360	Phytochrome region
AhaeAN59_10675	PF01590	GAF domain
AhaeAN59_10675	PF00563	EAL domain
AhaeAN59_10680	PF01979	Amidohydrolase family
AhaeAN59_10685	PF00929	Exonuclease
AhaeAN59_10695	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AhaeAN59_10695	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_10700	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AhaeAN59_10700	PF00005	ABC transporter
AhaeAN59_10705	PF12911	N-terminal TM domain of oligopeptide transport permease C
AhaeAN59_10705	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_10710	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_10715	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AhaeAN59_10720	PF01464	Transglycosylase SLT domain
AhaeAN59_10720	PF01476	LysM domain
AhaeAN59_10720	PF01464	Transglycosylase SLT domain
AhaeAN59_10720	PF01476	LysM domain
AhaeAN59_10725	PF00929	Exonuclease
AhaeAN59_10735	PF00293	NUDIX domain
AhaeAN59_10735	PF09297	NADH pyrophosphatase zinc ribbon domain
AhaeAN59_10740	PF07859	alpha/beta hydrolase fold
AhaeAN59_10745	PF04972	BON domain
AhaeAN59_10750	PF02021	Uncharacterised protein family UPF0102
AhaeAN59_10760	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AhaeAN59_10765	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_10765	PF03466	LysR substrate binding domain
AhaeAN59_10770	PF01810	LysE type translocator
AhaeAN59_10780	PF01494	FAD binding domain
AhaeAN59_10785	PF01494	FAD binding domain
AhaeAN59_10790	PF00557	Metallopeptidase family M24
AhaeAN59_10790	PF05195	Aminopeptidase P, N-terminal domain
AhaeAN59_10795	PF03695	Uncharacterised protein family (UPF0149)
AhaeAN59_10830	PF13411	MerR HTH family regulatory protein
AhaeAN59_10840	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AhaeAN59_10845	PF00004	ATPase family associated with various cellular activities (AAA)
AhaeAN59_10845	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
AhaeAN59_10845	PF05362	Lon protease (S16) C-terminal proteolytic domain
AhaeAN59_10850	PF02590	Predicted SPOUT methyltransferase
AhaeAN59_10855	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
AhaeAN59_10865	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AhaeAN59_10865	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AhaeAN59_10885	PF13737	Transposase DDE domain
AhaeAN59_10895	PF04060	Putative Fe-S cluster
AhaeAN59_10900	PF10576	Iron-sulfur binding domain of endonuclease III
AhaeAN59_10900	PF00633	Helix-hairpin-helix motif
AhaeAN59_10900	PF00730	HhH-GPD superfamily base excision DNA repair protein
AhaeAN59_10910	PF05191	Adenylate kinase, active site lid
AhaeAN59_10925	PF03717	Penicillin-binding Protein dimerisation domain
AhaeAN59_10925	PF00905	Penicillin binding protein transpeptidase domain
AhaeAN59_10955	PF08496	Peptidase family S49 N-terminal
AhaeAN59_10955	PF01343	Peptidase family S49
AhaeAN59_10960	PF00005	ABC transporter
AhaeAN59_10965	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_10970	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_10980	PF00355	Rieske [2Fe-2S] domain
AhaeAN59_10985	PF00282	Pyridoxal-dependent decarboxylase conserved domain
AhaeAN59_10990	PF00202	Aminotransferase class-III
AhaeAN59_11000	PF00593	TonB dependent receptor
AhaeAN59_11000	PF07660	Secretin and TonB N terminus short domain
AhaeAN59_11000	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_11010	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_11020	PF00487	Fatty acid desaturase
AhaeAN59_11025	PF00970	Oxidoreductase FAD-binding domain
AhaeAN59_11025	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_11025	PF00111	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_11030	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_11040	PF00210	Ferritin-like domain
AhaeAN59_11045	PF18339	RapA N-terminal Tudor like domain 1
AhaeAN59_11045	PF18337	RapA N-terminal Tudor like domain
AhaeAN59_11045	PF00271	Helicase conserved C-terminal domain
AhaeAN59_11045	PF12137	RNA polymerase recycling family C-terminal
AhaeAN59_11045	PF00176	SNF2 family N-terminal domain
AhaeAN59_11050	PF00849	RNA pseudouridylate synthase
AhaeAN59_11060	PF00202	Aminotransferase class-III
AhaeAN59_11065	PF02581	Thiamine monophosphate synthase
AhaeAN59_11090	PF01699	Sodium/calcium exchanger protein
AhaeAN59_11095	PF00675	Insulinase (Peptidase family M16)
AhaeAN59_11095	PF05193	Peptidase M16 inactive domain
AhaeAN59_11100	PF02567	Phenazine biosynthesis-like protein
AhaeAN59_11110	PF00180	Isocitrate/isopropylmalate dehydrogenase
AhaeAN59_11115	PF00849	RNA pseudouridylate synthase
AhaeAN59_11125	PF03971	Monomeric isocitrate dehydrogenase
AhaeAN59_11130	PF00576	HIUase/Transthyretin family
AhaeAN59_11140	PF07943	Penicillin-binding protein 5, C-terminal domain
AhaeAN59_11140	PF00768	D-alanyl-D-alanine carboxypeptidase
AhaeAN59_11145	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_11150	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_11155	PF03441	FAD binding domain of DNA photolyase
AhaeAN59_11155	PF00875	DNA photolyase
AhaeAN59_11175	PF01654	Cytochrome bd terminal oxidase subunit I
AhaeAN59_11180	PF02322	Cytochrome bd terminal oxidase subunit II
AhaeAN59_11185	PF03060	Nitronate monooxygenase
AhaeAN59_11190	PF17941	Polyphosphate kinase C-terminal domain 1
AhaeAN59_11190	PF13090	Polyphosphate kinase C-terminal domain 2
AhaeAN59_11190	PF13089	Polyphosphate kinase N-terminal domain
AhaeAN59_11190	PF02503	Polyphosphate kinase middle domain
AhaeAN59_11195	PF00912	Transglycosylase
AhaeAN59_11200	PF01694	Rhomboid family
AhaeAN59_11215	PF00005	ABC transporter
AhaeAN59_11220	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_11220	PF03050	Transposase IS66 family 
AhaeAN59_11220	PF13817	IS66 C-terminal element
AhaeAN59_11220	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_11235	PF13472	GDSL-like Lipase/Acylhydrolase family
AhaeAN59_11240	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_11245	PF00484	Carbonic anhydrase
AhaeAN59_11250	PF00561	alpha/beta hydrolase fold
AhaeAN59_11275	PF01106	NifU-like domain
AhaeAN59_11275	PF01521	Iron-sulphur cluster biosynthesis
AhaeAN59_11290	PF00152	tRNA synthetases class II (D, K and N) 
AhaeAN59_11295	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AhaeAN59_11295	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AhaeAN59_11295	PF11890	Domain of unknown function (DUF3410)
AhaeAN59_11300	PF01219	Prokaryotic diacylglycerol kinase
AhaeAN59_11310	PF13356	Arm DNA-binding domain
AhaeAN59_11310	PF00589	Phage integrase family
AhaeAN59_11320	PF02384	N-6 DNA Methylase
AhaeAN59_11320	PF12161	HsdM N-terminal domain
AhaeAN59_11325	PF01420	Type I restriction modification DNA specificity domain
AhaeAN59_11330	PF08463	EcoEI R protein C-terminal
AhaeAN59_11330	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AhaeAN59_11330	PF00271	Helicase conserved C-terminal domain
AhaeAN59_11330	PF04851	Type III restriction enzyme, res subunit
AhaeAN59_11400	PF00120	Glutamine synthetase, catalytic domain
AhaeAN59_11405	PF00072	Response regulator receiver domain
AhaeAN59_11405	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_11410	PF02702	Osmosensitive K+ channel His kinase sensor domain
AhaeAN59_11410	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_11410	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_11410	PF13493	Domain of unknown function (DUF4118)
AhaeAN59_11415	PF02669	K+-transporting ATPase, c chain
AhaeAN59_11425	PF03814	Potassium-transporting ATPase A subunit
AhaeAN59_11430	PF02080	TrkA-C domain
AhaeAN59_11430	PF02254	TrkA-N domain
AhaeAN59_11435	PF02386	Cation transport protein
AhaeAN59_11450	PF00872	Transposase, Mutator family
AhaeAN59_11505	PF03389	MobA/MobL family
AhaeAN59_11515	PF01695	IstB-like ATP binding protein
AhaeAN59_11520	PF00665	Integrase core domain
AhaeAN59_11520	PF08281	Sigma-70, region 4
AhaeAN59_11540	PF00459	Inositol monophosphatase family
AhaeAN59_11545	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AhaeAN59_11570	PF00118	TCP-1/cpn60 chaperonin family
AhaeAN59_11575	PF00166	Chaperonin 10 Kd subunit
AhaeAN59_11580	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_11585	PF00781	Diacylglycerol kinase catalytic domain
AhaeAN59_11590	PF00821	Phosphoenolpyruvate carboxykinase C-terminal P-loop domain
AhaeAN59_11590	PF17297	Phosphoenolpyruvate carboxykinase N-terminal domain
AhaeAN59_11605	PF13737	Transposase DDE domain
AhaeAN59_11615	PF13737	Transposase DDE domain
AhaeAN59_11625	PF07660	Secretin and TonB N terminus short domain
AhaeAN59_11625	PF00593	TonB dependent receptor
AhaeAN59_11625	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_11630	PF01266	FAD dependent oxidoreductase
AhaeAN59_11630	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
AhaeAN59_11635	PF00455	DeoR C terminal sensor domain
AhaeAN59_11635	PF08220	DeoR-like helix-turn-helix domain
AhaeAN59_11640	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AhaeAN59_11640	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AhaeAN59_11650	PF14542	GCN5-related N-acetyl-transferase
AhaeAN59_11660	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AhaeAN59_11660	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AhaeAN59_11675	PF05656	Protein of unknown function (DUF805)
AhaeAN59_11685	PF13737	Transposase DDE domain
AhaeAN59_11705	PF09423	PhoD-like phosphatase
AhaeAN59_11705	PF16655	PhoD-like phosphatase, N-terminal domain
AhaeAN59_11720	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_11725	PF07152	YaeQ protein
AhaeAN59_11730	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AhaeAN59_11730	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AhaeAN59_11740	PF03061	Thioesterase superfamily
AhaeAN59_11760	PF07690	Major Facilitator Superfamily
AhaeAN59_11765	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_11770	PF00171	Aldehyde dehydrogenase family
AhaeAN59_11780	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_11780	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_11780	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_11785	PF03573	outer membrane porin, OprD family
AhaeAN59_11795	PF07519	Tannase and feruloyl esterase
AhaeAN59_11800	PF01494	FAD binding domain
AhaeAN59_11820	PF00390	Malic enzyme, N-terminal domain
AhaeAN59_11820	PF03949	Malic enzyme, NAD binding domain
AhaeAN59_11825	PF00324	Amino acid permease
AhaeAN59_11830	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AhaeAN59_11835	PF04996	Succinylarginine dihydrolase
AhaeAN59_11840	PF00171	Aldehyde dehydrogenase family
AhaeAN59_11845	PF04958	Arginine N-succinyltransferase beta subunit
AhaeAN59_11850	PF00202	Aminotransferase class-III
AhaeAN59_11855	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AhaeAN59_11855	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
AhaeAN59_11865	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_11865	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_11865	PF09317	Domain of unknown function (DUF1974)
AhaeAN59_11870	PF00465	Iron-containing alcohol dehydrogenase 
AhaeAN59_11875	PF01979	Amidohydrolase family
AhaeAN59_11875	PF13382	Adenine deaminase C-terminal domain
AhaeAN59_11885	PF00171	Aldehyde dehydrogenase family
AhaeAN59_11900	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_11925	PF07690	Major Facilitator Superfamily
AhaeAN59_11930	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_11930	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_11935	PF03061	Thioesterase superfamily
AhaeAN59_11940	PF00490	Delta-aminolevulinic acid dehydratase
AhaeAN59_11945	PF01266	FAD dependent oxidoreductase
AhaeAN59_11950	PF01370	NAD dependent epimerase/dehydratase family
AhaeAN59_11950	PF08338	Domain of unknown function (DUF1731)
AhaeAN59_11965	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_12000	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_12000	PF12320	Type 5 capsule protein repressor C-terminal domain
AhaeAN59_12015	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_12020	PF01168	Alanine racemase, N-terminal domain
AhaeAN59_12025	PF00437	Type II/IV secretion system protein
AhaeAN59_12030	PF00437	Type II/IV secretion system protein
AhaeAN59_12035	PF01475	Ferric uptake regulator family
AhaeAN59_12040	PF04355	SmpA / OmlA family
AhaeAN59_12045	PF03658	RnfH family Ubiquitin
AhaeAN59_12055	PF01814	Hemerythrin HHE cation binding domain
AhaeAN59_12060	PF13230	Glutamine amidotransferases class-II
AhaeAN59_12070	PF00696	Amino acid kinase family
AhaeAN59_12075	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AhaeAN59_12075	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AhaeAN59_12075	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AhaeAN59_12075	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AhaeAN59_12080	PF00692	dUTPase
AhaeAN59_12085	PF00580	UvrD/REP helicase N-terminal domain
AhaeAN59_12085	PF13361	UvrD-like helicase C-terminal domain
AhaeAN59_12090	PF00691	OmpA family
AhaeAN59_12090	PF13488	Glycine zipper
AhaeAN59_12095	PF01553	Acyltransferase
AhaeAN59_12105	PF03775	Septum formation inhibitor MinC, C-terminal domain
AhaeAN59_12110	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AhaeAN59_12115	PF03776	Septum formation topological specificity factor MinE
AhaeAN59_12125	PF01810	LysE type translocator
AhaeAN59_12130	PF01580	FtsK/SpoIIIE family
AhaeAN59_12130	PF17854	FtsK alpha domain
AhaeAN59_12130	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
AhaeAN59_12130	PF09397	Ftsk gamma domain
AhaeAN59_12135	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_12140	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
AhaeAN59_12145	PF04376	Arginine-tRNA-protein transferase, N terminus
AhaeAN59_12145	PF04377	Arginine-tRNA-protein transferase, C terminus
AhaeAN59_12150	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_12165	PF03144	Elongation factor Tu domain 2
AhaeAN59_12165	PF03143	Elongation factor Tu C-terminal domain
AhaeAN59_12165	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_12170	PF03764	Elongation factor G, domain IV
AhaeAN59_12170	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_12170	PF14492	Elongation Factor G, domain II
AhaeAN59_12170	PF03144	Elongation factor Tu domain 2
AhaeAN59_12170	PF00679	Elongation factor G C-terminus
AhaeAN59_12175	PF00177	Ribosomal protein S7p/S5e
AhaeAN59_12180	PF00164	Ribosomal protein S12/S23
AhaeAN59_12190	PF00109	Beta-ketoacyl synthase, N-terminal domain
AhaeAN59_12190	PF02801	Beta-ketoacyl synthase, C-terminal domain
AhaeAN59_12210	PF02540	NAD synthase
AhaeAN59_12210	PF00795	Carbon-nitrogen hydrolase
AhaeAN59_12235	PF00037	4Fe-4S binding domain
AhaeAN59_12240	PF01467	Cytidylyltransferase-like
AhaeAN59_12245	PF00589	Phage integrase family
AhaeAN59_12245	PF14659	Phage integrase, N-terminal SAM-like domain
AhaeAN59_12245	PF13356	Arm DNA-binding domain
AhaeAN59_12265	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_12265	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_12265	PF13817	IS66 C-terminal element
AhaeAN59_12265	PF03050	Transposase IS66 family 
AhaeAN59_12280	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_12285	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_12300	PF02421	Ferrous iron transport protein B
AhaeAN59_12300	PF07670	Nucleoside recognition
AhaeAN59_12300	PF07664	Ferrous iron transport protein B C terminus
AhaeAN59_12310	PF01545	Cation efflux family
AhaeAN59_12335	PF07731	Multicopper oxidase
AhaeAN59_12335	PF07732	Multicopper oxidase
AhaeAN59_12335	PF00394	Multicopper oxidase
AhaeAN59_12345	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_12345	PF00072	Response regulator receiver domain
AhaeAN59_12350	PF00672	HAMP domain
AhaeAN59_12350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_12350	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_12375	PF03050	Transposase IS66 family 
AhaeAN59_12375	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_12375	PF13817	IS66 C-terminal element
AhaeAN59_12375	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_12465	PF01668	SmpB protein
AhaeAN59_12470	PF03358	NADPH-dependent FMN reductase
AhaeAN59_12480	PF00849	RNA pseudouridylate synthase
AhaeAN59_12480	PF01479	S4 domain
AhaeAN59_12485	PF13525	Outer membrane lipoprotein
AhaeAN59_12490	PF10410	DnaB-helicase binding domain of primase
AhaeAN59_12490	PF08278	DNA primase DnaG DnaB-binding 
AhaeAN59_12490	PF01807	CHC2 zinc finger
AhaeAN59_12490	PF08275	DNA primase catalytic core, N-terminal domain
AhaeAN59_12500	PF01488	Shikimate / quinate 5-dehydrogenase
AhaeAN59_12500	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AhaeAN59_12500	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AhaeAN59_12510	PF03550	Outer membrane lipoprotein LolB
AhaeAN59_12515	PF00288	GHMP kinases N terminal domain
AhaeAN59_12515	PF08544	GHMP kinases C terminal 
AhaeAN59_12525	PF14572	Phosphoribosyl synthetase-associated domain
AhaeAN59_12525	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AhaeAN59_12530	PF01386	Ribosomal L25p family
AhaeAN59_12535	PF01195	Peptidyl-tRNA hydrolase
AhaeAN59_12540	PF02261	Aspartate decarboxylase
AhaeAN59_12545	PF01734	Patatin-like phospholipase
AhaeAN59_12545	PF00027	Cyclic nucleotide-binding domain
AhaeAN59_12560	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AhaeAN59_12565	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_12570	PF02581	Thiamine monophosphate synthase
AhaeAN59_12570	PF03070	TENA/THI-4/PQQC family
AhaeAN59_12570	PF08543	Phosphomethylpyrimidine kinase
AhaeAN59_12575	PF00593	TonB dependent receptor
AhaeAN59_12575	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_12580	PF04972	BON domain
AhaeAN59_12580	PF01476	LysM domain
AhaeAN59_12585	PF00550	Phosphopantetheine attachment site
AhaeAN59_12590	PF00550	Phosphopantetheine attachment site
AhaeAN59_12600	PF00698	Acyl transferase domain
AhaeAN59_12605	PF01783	Ribosomal L32p protein family
AhaeAN59_12610	PF02620	Large ribosomal RNA subunit accumulation protein YceD
AhaeAN59_12615	PF04315	Elongation factor P hydroxylase
AhaeAN59_12620	PF01300	Telomere recombination
AhaeAN59_12640	PF02616	Segregation and condensation protein ScpA
AhaeAN59_12645	PF04079	Segregation and condensation complex subunit ScpB
AhaeAN59_12650	PF01479	S4 domain
AhaeAN59_12650	PF00849	RNA pseudouridylate synthase
AhaeAN59_12655	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AhaeAN59_12655	PF00005	ABC transporter
AhaeAN59_12660	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_12660	PF12911	N-terminal TM domain of oligopeptide transport permease C
AhaeAN59_12665	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_12675	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AhaeAN59_12685	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_12685	PF00593	TonB dependent receptor
AhaeAN59_12695	PF01618	MotA/TolQ/ExbB proton channel family
AhaeAN59_12700	PF02472	Biopolymer transport protein ExbD/TolR
AhaeAN59_12705	PF02472	Biopolymer transport protein ExbD/TolR
AhaeAN59_12725	PF00155	Aminotransferase class I and II
AhaeAN59_12730	PF04055	Radical SAM superfamily
AhaeAN59_12730	PF06968	Biotin and Thiamin Synthesis associated domain
AhaeAN59_12730	PF00202	Aminotransferase class-III
AhaeAN59_12740	PF00561	alpha/beta hydrolase fold
AhaeAN59_12750	PF00578	AhpC/TSA family
AhaeAN59_12755	PF00210	Ferritin-like domain
AhaeAN59_12765	PF12826	Helix-hairpin-helix motif
AhaeAN59_12765	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AhaeAN59_12765	PF01653	NAD-dependent DNA ligase adenylation domain
AhaeAN59_12765	PF00533	BRCA1 C Terminus (BRCT) domain
AhaeAN59_12765	PF03120	NAD-dependent DNA ligase OB-fold domain
AhaeAN59_12775	PF02463	RecF/RecN/SMC N terminal domain
AhaeAN59_12775	PF06470	SMC proteins Flexible Hinge Domain
AhaeAN59_12785	PF01925	Sulfite exporter TauE/SafE
AhaeAN59_12795	PF03309	Type III pantothenate kinase
AhaeAN59_12805	PF02978	Signal peptide binding domain
AhaeAN59_12805	PF02881	SRP54-type protein, helical bundle domain
AhaeAN59_12805	PF00448	SRP54-type protein, GTPase domain
AhaeAN59_12815	PF01207	Dihydrouridine synthase (Dus)
AhaeAN59_12840	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_12840	PF03050	Transposase IS66 family 
AhaeAN59_12840	PF13817	IS66 C-terminal element
AhaeAN59_12840	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_12875	PF00692	dUTPase
AhaeAN59_12895	PF16868	NMT1-like family
AhaeAN59_12910	PF01048	Phosphorylase superfamily
AhaeAN59_12915	PF10609	NUBPL iron-transfer P-loop NTPase
AhaeAN59_12925	PF13302	Acetyltransferase (GNAT) domain
AhaeAN59_12935	PF01588	Putative tRNA binding domain
AhaeAN59_12935	PF09334	tRNA synthetases class I (M)
AhaeAN59_12945	PF10996	Beta-Casp domain
AhaeAN59_12945	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_12945	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
AhaeAN59_12960	PF13533	Biotin-lipoyl like
AhaeAN59_12965	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_12975	PF05552	Conserved TM helix
AhaeAN59_12990	PF00970	Oxidoreductase FAD-binding domain
AhaeAN59_12990	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_12995	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_12995	PF03466	LysR substrate binding domain
AhaeAN59_13000	PF00313	'Cold-shock' DNA-binding domain
AhaeAN59_13015	PF00361	Proton-conducting membrane transporter
AhaeAN59_13020	PF00361	Proton-conducting membrane transporter
AhaeAN59_13025	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AhaeAN59_13025	PF00361	Proton-conducting membrane transporter
AhaeAN59_13030	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AhaeAN59_13035	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
AhaeAN59_13040	PF12838	4Fe-4S dicluster domain
AhaeAN59_13045	PF00146	NADH dehydrogenase
AhaeAN59_13050	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AhaeAN59_13050	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AhaeAN59_13050	PF00384	Molybdopterin oxidoreductase
AhaeAN59_13055	PF10531	SLBB domain
AhaeAN59_13055	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AhaeAN59_13055	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AhaeAN59_13065	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AhaeAN59_13065	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AhaeAN59_13070	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AhaeAN59_13075	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
AhaeAN59_13090	PF00672	HAMP domain
AhaeAN59_13090	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_13090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_13095	PF00486	Transcriptional regulatory protein, C terminal
AhaeAN59_13095	PF00072	Response regulator receiver domain
AhaeAN59_13100	PF00317	Ribonucleotide reductase, all-alpha domain
AhaeAN59_13100	PF03477	ATP cone domain
AhaeAN59_13100	PF02867	Ribonucleotide reductase, barrel domain
AhaeAN59_13110	PF00268	Ribonucleotide reductase, small chain
AhaeAN59_13140	PF02445	Quinolinate synthetase A protein
AhaeAN59_13145	PF01960	ArgJ family
AhaeAN59_13150	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AhaeAN59_13150	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AhaeAN59_13155	PF00893	Small Multidrug Resistance protein
AhaeAN59_13170	PF05275	Copper resistance protein B precursor (CopB)
AhaeAN59_13175	PF07732	Multicopper oxidase
AhaeAN59_13175	PF00394	Multicopper oxidase
AhaeAN59_13175	PF07731	Multicopper oxidase
AhaeAN59_13185	PF00834	Ribulose-phosphate 3 epimerase family
AhaeAN59_13195	PF00756	Putative esterase
AhaeAN59_13205	PF04445	Putative SAM-dependent methyltransferase
AhaeAN59_13210	PF02673	Bacitracin resistance protein BacA
AhaeAN59_13215	PF00814	Glycoprotease family
AhaeAN59_13220	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_13225	PF00293	NUDIX domain
AhaeAN59_13255	PF00425	chorismate binding enzyme
AhaeAN59_13255	PF04715	Anthranilate synthase component I, N terminal region
AhaeAN59_13260	PF00155	Aminotransferase class I and II
AhaeAN59_13265	PF00815	Histidinol dehydrogenase
AhaeAN59_13275	PF04542	Sigma-70 region 2 
AhaeAN59_13275	PF08281	Sigma-70, region 4
AhaeAN59_13275	PF12680	SnoaL-like domain
AhaeAN59_13280	PF01634	ATP phosphoribosyltransferase
AhaeAN59_13285	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AhaeAN59_13290	PF01722	BolA-like protein
AhaeAN59_13295	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AhaeAN59_13300	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
AhaeAN59_13300	PF04963	Sigma-54 factor, core binding domain
AhaeAN59_13300	PF04552	Sigma-54, DNA binding domain
AhaeAN59_13350	PF00795	Carbon-nitrogen hydrolase
AhaeAN59_13360	PF02566	OsmC-like protein
AhaeAN59_13365	PF00437	Type II/IV secretion system protein
AhaeAN59_13385	PF00476	DNA polymerase family A
AhaeAN59_13385	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AhaeAN59_13385	PF01367	5'-3' exonuclease, C-terminal SAM fold
AhaeAN59_13385	PF01612	3'-5' exonuclease
AhaeAN59_13390	PF02325	YGGT family
AhaeAN59_13395	PF03807	NADP oxidoreductase coenzyme F420-dependent
AhaeAN59_13395	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AhaeAN59_13400	PF11734	TilS substrate C-terminal domain
AhaeAN59_13400	PF01171	PP-loop family
AhaeAN59_13400	PF09179	TilS substrate binding domain
AhaeAN59_13405	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AhaeAN59_13410	PF02541	Ppx/GppA phosphatase family
AhaeAN59_13415	PF00085	Thioredoxin
AhaeAN59_13420	PF07497	Rho termination factor, RNA-binding domain
AhaeAN59_13420	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AhaeAN59_13420	PF07498	Rho termination factor, N-terminal domain
AhaeAN59_13430	PF00216	Bacterial DNA-binding protein
AhaeAN59_13435	PF03147	Ferredoxin-fold anticodon binding domain
AhaeAN59_13435	PF03484	tRNA synthetase B5 domain
AhaeAN59_13435	PF03483	B3/4 domain
AhaeAN59_13435	PF01588	Putative tRNA binding domain
AhaeAN59_13435	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
AhaeAN59_13440	PF01409	tRNA synthetases class II core domain (F)
AhaeAN59_13440	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AhaeAN59_13455	PF00453	Ribosomal protein L20
AhaeAN59_13460	PF01632	Ribosomal protein L35
AhaeAN59_13465	PF09335	SNARE associated Golgi protein
AhaeAN59_13480	PF00043	Glutathione S-transferase, C-terminal domain
AhaeAN59_13480	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_13490	PF00707	Translation initiation factor IF-3, C-terminal domain
AhaeAN59_13490	PF05198	Translation initiation factor IF-3, N-terminal domain
AhaeAN59_13495	PF03129	Anticodon binding domain
AhaeAN59_13495	PF02824	TGS domain
AhaeAN59_13495	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AhaeAN59_13495	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AhaeAN59_13500	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_13500	PF00501	AMP-binding enzyme
AhaeAN59_13505	PF04751	Protein of unknown function (DUF615)
AhaeAN59_13510	PF00381	PTS HPr component phosphorylation site
AhaeAN59_13515	PF03668	P-loop ATPase protein family
AhaeAN59_13520	PF02569	Pantoate-beta-alanine ligase
AhaeAN59_13525	PF02548	Ketopantoate hydroxymethyltransferase
AhaeAN59_13530	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AhaeAN59_13535	PF01743	Poly A polymerase head domain
AhaeAN59_13535	PF12626	Polymerase A arginine-rich C-terminus
AhaeAN59_13535	PF12627	Probable RNA and SrmB- binding site of polymerase A
AhaeAN59_13545	PF03819	MazG nucleotide pyrophosphohydrolase domain
AhaeAN59_13560	PF04607	Region found in RelA / SpoT proteins
AhaeAN59_13560	PF02824	TGS domain
AhaeAN59_13560	PF13291	ACT domain
AhaeAN59_13565	PF05958	tRNA (Uracil-5-)-methyltransferase
AhaeAN59_13575	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_13580	PF01627	Hpt domain
AhaeAN59_13580	PF00672	HAMP domain
AhaeAN59_13580	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_13580	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_13580	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
AhaeAN59_13580	PF00072	Response regulator receiver domain
AhaeAN59_13585	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_13590	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AhaeAN59_13590	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AhaeAN59_13595	PF01261	Xylose isomerase-like TIM barrel
AhaeAN59_13605	PF00106	short chain dehydrogenase
AhaeAN59_13610	PF02233	NAD(P) transhydrogenase beta subunit
AhaeAN59_13615	PF12769	4TM region of pyridine nucleotide transhydrogenase, mitoch
AhaeAN59_13620	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AhaeAN59_13620	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AhaeAN59_13630	PF00376	MerR family regulatory protein
AhaeAN59_13630	PF09278	MerR, DNA binding
AhaeAN59_13640	PF07690	Major Facilitator Superfamily
AhaeAN59_13645	PF05721	Phytanoyl-CoA dioxygenase (PhyH)
AhaeAN59_13650	PF06339	Ectoine synthase
AhaeAN59_13655	PF00202	Aminotransferase class-III
AhaeAN59_13660	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_13665	PF12802	MarR family
AhaeAN59_13670	PF03358	NADPH-dependent FMN reductase
AhaeAN59_13675	PF01758	Sodium Bile acid symporter family
AhaeAN59_13685	PF01022	Bacterial regulatory protein, arsR family
AhaeAN59_13690	PF03960	ArsC family
AhaeAN59_13700	PF01207	Dihydrouridine synthase (Dus)
AhaeAN59_13710	PF00899	ThiF family
AhaeAN59_13720	PF00330	Aconitase family (aconitate hydratase)
AhaeAN59_13720	PF00694	Aconitase C-terminal domain
AhaeAN59_13725	PF01026	TatD related DNase
AhaeAN59_13740	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_13740	PF03144	Elongation factor Tu domain 2
AhaeAN59_13740	PF16658	Class II release factor RF3, C-terminal domain
AhaeAN59_13745	PF02661	Fic/DOC family
AhaeAN59_13745	PF13784	Fic/DOC family N-terminal
AhaeAN59_13750	PF12008	Type I restriction and modification enzyme - subunit R C terminal
AhaeAN59_13750	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
AhaeAN59_13750	PF18766	SWI2/SNF2 ATPase
AhaeAN59_13760	PF12161	HsdM N-terminal domain
AhaeAN59_13760	PF02384	N-6 DNA Methylase
AhaeAN59_13930	PF13737	Transposase DDE domain
AhaeAN59_13955	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_13955	PF03707	Bacterial signalling protein N terminal repeat
AhaeAN59_13955	PF00563	EAL domain
AhaeAN59_13960	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
AhaeAN59_13960	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AhaeAN59_13965	PF10369	Small subunit of acetolactate synthase
AhaeAN59_13970	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AhaeAN59_13970	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AhaeAN59_13970	PF00205	Thiamine pyrophosphate enzyme, central domain
AhaeAN59_13980	PF08264	Anticodon-binding domain of tRNA
AhaeAN59_13980	PF00133	tRNA synthetases class I (I, L, M and V)
AhaeAN59_13980	PF13603	Leucyl-tRNA synthetase, Domain 2
AhaeAN59_13980	PF09334	tRNA synthetases class I (M)
AhaeAN59_13990	PF06144	DNA polymerase III, delta subunit
AhaeAN59_13995	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_14000	PF12704	MacB-like periplasmic core domain
AhaeAN59_14000	PF02687	FtsX-like permease family
AhaeAN59_14000	PF00005	ABC transporter
AhaeAN59_14005	PF02321	Outer membrane efflux protein
AhaeAN59_14030	PF00929	Exonuclease
AhaeAN59_14035	PF03193	RsgA GTPase
AhaeAN59_14045	PF00462	Glutaredoxin
AhaeAN59_14050	PF02556	Preprotein translocase subunit SecB
AhaeAN59_14065	PF09859	Oxygenase, catalysing oxidative methylation of damaged DNA
AhaeAN59_14070	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AhaeAN59_14070	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AhaeAN59_14080	PF04127	DNA / pantothenate metabolism flavoprotein
AhaeAN59_14080	PF02441	Flavoprotein
AhaeAN59_14085	PF04002	RadC-like JAB domain
AhaeAN59_14090	PF01062	Bestrophin, RFP-TM, chloride channel
AhaeAN59_14095	PF02811	PHP domain
AhaeAN59_14100	PF04279	Intracellular septation protein A 
AhaeAN59_14115	PF01266	FAD dependent oxidoreductase
AhaeAN59_14115	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
AhaeAN59_14125	PF04461	Protein of unknown function (DUF520)
AhaeAN59_14140	PF13185	GAF domain
AhaeAN59_14145	PF03061	Thioesterase superfamily
AhaeAN59_14150	PF00085	Thioredoxin
AhaeAN59_14155	PF00561	alpha/beta hydrolase fold
AhaeAN59_14160	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_14160	PF04273	Putative phosphatase (DUF442)
AhaeAN59_14210	PF01066	CDP-alcohol phosphatidyltransferase
AhaeAN59_14215	PF04378	Ribosomal RNA large subunit methyltransferase D, RlmJ
AhaeAN59_14235	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AhaeAN59_14235	PF00056	lactate/malate dehydrogenase, NAD binding domain
AhaeAN59_14245	PF10145	Phage-related minor tail protein
AhaeAN59_14245	PF01464	Transglycosylase SLT domain
AhaeAN59_14245	PF01551	Peptidase family M23
AhaeAN59_14250	PF04055	Radical SAM superfamily
AhaeAN59_14250	PF00919	Uncharacterized protein family UPF0004
AhaeAN59_14250	PF01938	TRAM domain
AhaeAN59_14255	PF02562	PhoH-like protein
AhaeAN59_14260	PF02130	Uncharacterized protein family UPF0054
AhaeAN59_14270	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_14270	PF00593	TonB dependent receptor
AhaeAN59_14295	PF00303	Thymidylate synthase
AhaeAN59_14300	PF00186	Dihydrofolate reductase
AhaeAN59_14315	PF01625	Peptide methionine sulfoxide reductase
AhaeAN59_14325	PF01618	MotA/TolQ/ExbB proton channel family
AhaeAN59_14335	PF01842	ACT domain
AhaeAN59_14335	PF00551	Formyl transferase
AhaeAN59_14340	PF08360	QacR-like protein, C-terminal region
AhaeAN59_14340	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_14345	PF00171	Aldehyde dehydrogenase family
AhaeAN59_14350	PF00830	Ribosomal L28 family
AhaeAN59_14355	PF00471	Ribosomal protein L33
AhaeAN59_14360	PF00999	Sodium/hydrogen exchanger family
AhaeAN59_14360	PF02254	TrkA-N domain
AhaeAN59_14385	PF00580	UvrD/REP helicase N-terminal domain
AhaeAN59_14385	PF13361	UvrD-like helicase C-terminal domain
AhaeAN59_14400	PF01131	DNA topoisomerase
AhaeAN59_14400	PF08272	Topoisomerase I zinc-ribbon-like 
AhaeAN59_14400	PF01751	Toprim domain
AhaeAN59_14400	PF01396	Topoisomerase DNA binding C4 zinc finger
AhaeAN59_14410	PF01638	HxlR-like helix-turn-helix
AhaeAN59_14415	PF08240	Alcohol dehydrogenase GroES-like domain
AhaeAN59_14415	PF00107	Zinc-binding dehydrogenase
AhaeAN59_14420	PF04102	SlyX
AhaeAN59_14435	PF03279	Bacterial lipid A biosynthesis acyltransferase
AhaeAN59_14445	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AhaeAN59_14445	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AhaeAN59_14465	PF01416	tRNA pseudouridine synthase
AhaeAN59_14475	PF01176	Translation initiation factor 1A / IF-1
AhaeAN59_14485	PF00180	Isocitrate/isopropylmalate dehydrogenase
AhaeAN59_14495	PF00694	Aconitase C-terminal domain
AhaeAN59_14500	PF00330	Aconitase family (aconitate hydratase)
AhaeAN59_14510	PF03466	LysR substrate binding domain
AhaeAN59_14510	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_14520	PF00293	NUDIX domain
AhaeAN59_14525	PF02896	PEP-utilising enzyme, TIM barrel domain
AhaeAN59_14525	PF00391	PEP-utilising enzyme, mobile domain
AhaeAN59_14525	PF05524	PEP-utilising enzyme, N-terminal
AhaeAN59_14525	PF01590	GAF domain
AhaeAN59_14535	PF00141	Peroxidase
AhaeAN59_14550	PF12706	Beta-lactamase superfamily domain
AhaeAN59_14555	PF02798	Glutathione S-transferase, N-terminal domain
AhaeAN59_14570	PF01479	S4 domain
AhaeAN59_14570	PF00849	RNA pseudouridylate synthase
AhaeAN59_14580	PF00575	S1 RNA binding domain
AhaeAN59_14580	PF10150	Ribonuclease E/G family
AhaeAN59_14580	PF12111	Polyribonucleotide phosphorylase C terminal
AhaeAN59_14585	PF00501	AMP-binding enzyme
AhaeAN59_14585	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_14600	PF04055	Radical SAM superfamily
AhaeAN59_14600	PF06969	HemN C-terminal domain
AhaeAN59_14610	PF01554	MatE
AhaeAN59_14615	PF03109	ABC1 family
AhaeAN59_14620	PF01197	Ribosomal protein L31
AhaeAN59_14630	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
AhaeAN59_14640	PF01613	Flavin reductase like domain
AhaeAN59_14650	PF00375	Sodium:dicarboxylate symporter family
AhaeAN59_14665	PF03884	DNA gyrase inhibitor YacG
AhaeAN59_14670	PF01244	Membrane dipeptidase (Peptidase family M19)
AhaeAN59_14675	PF04055	Radical SAM superfamily
AhaeAN59_14675	PF13186	Iron-sulfur cluster-binding domain
AhaeAN59_14680	PF05402	Coenzyme PQQ synthesis protein D (PqqD)
AhaeAN59_14685	PF03070	TENA/THI-4/PQQC family
AhaeAN59_14690	PF12706	Beta-lactamase superfamily domain
AhaeAN59_14695	PF08042	PqqA family
AhaeAN59_14705	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_14710	PF00762	Ferrochelatase
AhaeAN59_14720	PF01177	Asp/Glu/Hydantoin racemase
AhaeAN59_14735	PF01206	Sulfurtransferase TusA
AhaeAN59_14740	PF03471	Transporter associated domain
AhaeAN59_14740	PF00571	CBS domain
AhaeAN59_14745	PF00795	Carbon-nitrogen hydrolase
AhaeAN59_14755	PF07963	Prokaryotic N-terminal methylation motif
AhaeAN59_14755	PF08334	Type II secretion system (T2SS), protein G
AhaeAN59_14760	PF00482	Type II secretion system (T2SS), protein F
AhaeAN59_14765	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
AhaeAN59_14765	PF18074	Primosomal protein N C-terminal domain
AhaeAN59_14765	PF17764	3′ DNA-binding domain (3′BD)
AhaeAN59_14765	PF00271	Helicase conserved C-terminal domain
AhaeAN59_14765	PF00270	DEAD/DEAH box helicase
AhaeAN59_14770	PF02254	TrkA-N domain
AhaeAN59_14770	PF00999	Sodium/hydrogen exchanger family
AhaeAN59_14775	PF01430	Hsp33 protein
AhaeAN59_14785	PF00226	DnaJ domain
AhaeAN59_14785	PF01556	DnaJ C terminal domain
AhaeAN59_14795	PF01544	CorA-like Mg2+ transporter protein
AhaeAN59_14800	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AhaeAN59_14800	PF03725	3' exoribonuclease family, domain 2
AhaeAN59_14800	PF01138	3' exoribonuclease family, domain 1
AhaeAN59_14800	PF00575	S1 RNA binding domain
AhaeAN59_14800	PF00013	KH domain
AhaeAN59_14805	PF00312	Ribosomal protein S15
AhaeAN59_14815	PF13538	UvrD-like helicase C-terminal domain
AhaeAN59_14820	PF12705	PD-(D/E)XK nuclease superfamily
AhaeAN59_14820	PF00580	UvrD/REP helicase N-terminal domain
AhaeAN59_14820	PF13361	UvrD-like helicase C-terminal domain
AhaeAN59_14825	PF17946	RecC C-terminal domain
AhaeAN59_14835	PF07690	Major Facilitator Superfamily
AhaeAN59_14840	PF03976	Polyphosphate kinase 2 (PPK2)
AhaeAN59_14850	PF01209	ubiE/COQ5 methyltransferase family
AhaeAN59_14860	PF03109	ABC1 family
AhaeAN59_14870	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_14875	PF00005	ABC transporter
AhaeAN59_14880	PF01494	FAD binding domain
AhaeAN59_14885	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AhaeAN59_14890	PF01502	Phosphoribosyl-AMP cyclohydrolase
AhaeAN59_14905	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AhaeAN59_14905	PF00361	Proton-conducting membrane transporter
AhaeAN59_14905	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
AhaeAN59_14905	PF13244	Domain of unknown function (DUF4040)
AhaeAN59_14910	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AhaeAN59_14915	PF00361	Proton-conducting membrane transporter
AhaeAN59_14920	PF01899	Na+/H+ ion antiporter subunit
AhaeAN59_14925	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
AhaeAN59_14950	PF02033	Ribosome-binding factor A
AhaeAN59_14955	PF04760	Translation initiation factor IF-2, N-terminal region
AhaeAN59_14955	PF08364	Bacterial translation initiation factor IF-2 associated region
AhaeAN59_14955	PF11987	Translation-initiation factor 2
AhaeAN59_14955	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_14960	PF00575	S1 RNA binding domain
AhaeAN59_14960	PF08529	NusA N-terminal domain
AhaeAN59_14960	PF13184	NusA-like KH domain
AhaeAN59_14965	PF17384	RimP C-terminal SH3 domain
AhaeAN59_14965	PF02576	RimP N-terminal domain
AhaeAN59_14985	PF03840	Preprotein translocase SecG subunit
AhaeAN59_14990	PF00121	Triosephosphate isomerase
AhaeAN59_14995	PF00437	Type II/IV secretion system protein
AhaeAN59_14995	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AhaeAN59_15015	PF06750	Bacterial Peptidase A24 N-terminal domain
AhaeAN59_15015	PF01478	Type IV leader peptidase family
AhaeAN59_15020	PF01121	Dephospho-CoA kinase
AhaeAN59_15035	PF00588	SpoU rRNA Methylase family
AhaeAN59_15035	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AhaeAN59_15040	PF06865	Pyrimidine/purine nucleoside phosphorylase
AhaeAN59_15045	PF02463	RecF/RecN/SMC N terminal domain
AhaeAN59_15050	PF02622	Uncharacterized ACR, COG1678
AhaeAN59_15055	PF03652	Holliday junction resolvase
AhaeAN59_15060	PF13533	Biotin-lipoyl like
AhaeAN59_15080	PF01066	CDP-alcohol phosphatidyltransferase
AhaeAN59_15090	PF08459	UvrC Helix-hairpin-helix N-terminal
AhaeAN59_15090	PF01541	GIY-YIG catalytic domain
AhaeAN59_15090	PF02151	UvrB/uvrC motif
AhaeAN59_15105	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_15105	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AhaeAN59_15105	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_15110	PF00108	Thiolase, N-terminal domain
AhaeAN59_15110	PF02803	Thiolase, C-terminal domain
AhaeAN59_15135	PF00005	ABC transporter
AhaeAN59_15135	PF00664	ABC transporter transmembrane region
AhaeAN59_15145	PF01323	DSBA-like thioredoxin domain
AhaeAN59_15160	PF00183	Hsp90 protein
AhaeAN59_15160	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_15170	PF13726	Na+-H+ antiporter family
AhaeAN59_15170	PF03553	Na+/H+ antiporter family
AhaeAN59_15195	PF04983	RNA polymerase Rpb1, domain 3
AhaeAN59_15195	PF05000	RNA polymerase Rpb1, domain 4
AhaeAN59_15195	PF04998	RNA polymerase Rpb1, domain 5
AhaeAN59_15195	PF00623	RNA polymerase Rpb1, domain 2
AhaeAN59_15195	PF04997	RNA polymerase Rpb1, domain 1
AhaeAN59_15200	PF04563	RNA polymerase beta subunit
AhaeAN59_15200	PF00562	RNA polymerase Rpb2, domain 6
AhaeAN59_15200	PF04560	RNA polymerase Rpb2, domain 7
AhaeAN59_15200	PF10385	RNA polymerase beta subunit external 1 domain
AhaeAN59_15200	PF04561	RNA polymerase Rpb2, domain 2
AhaeAN59_15200	PF04565	RNA polymerase Rpb2, domain 3
AhaeAN59_15205	PF16320	Ribosomal protein L7/L12 dimerisation domain
AhaeAN59_15205	PF00542	Ribosomal protein L7/L12 C-terminal domain
AhaeAN59_15210	PF00466	Ribosomal protein L10
AhaeAN59_15215	PF00687	Ribosomal protein L1p/L10e family
AhaeAN59_15220	PF03946	Ribosomal protein L11, N-terminal domain
AhaeAN59_15220	PF00298	Ribosomal protein L11, RNA binding domain
AhaeAN59_15225	PF02357	Transcription termination factor nusG
AhaeAN59_15225	PF00467	KOW motif
AhaeAN59_15230	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AhaeAN59_15240	PF03144	Elongation factor Tu domain 2
AhaeAN59_15240	PF00009	Elongation factor Tu GTP binding domain
AhaeAN59_15240	PF03143	Elongation factor Tu C-terminal domain
AhaeAN59_15265	PF00425	chorismate binding enzyme
AhaeAN59_15265	PF04715	Anthranilate synthase component I, N terminal region
AhaeAN59_15270	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_15275	PF12401	Protein of unknown function (DUF2662) 
AhaeAN59_15275	PF00498	FHA domain
AhaeAN59_15280	PF00263	Bacterial type II and III secretion system protein
AhaeAN59_15280	PF03958	Bacterial type II/III secretion system short domain
AhaeAN59_15295	PF00816	H-NS histone family
AhaeAN59_15305	PF13737	Transposase DDE domain
AhaeAN59_15330	PF03900	Porphobilinogen deaminase, C-terminal domain
AhaeAN59_15330	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AhaeAN59_15335	PF04397	LytTr DNA-binding domain
AhaeAN59_15335	PF00072	Response regulator receiver domain
AhaeAN59_15340	PF06580	Histidine kinase
AhaeAN59_15340	PF07694	5TMR of 5TMR-LYT
AhaeAN59_15340	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_15345	PF00206	Lyase
AhaeAN59_15345	PF14698	Argininosuccinate lyase C-terminal
AhaeAN59_15350	PF04362	Bacterial Fe(2+) trafficking
AhaeAN59_15355	PF01895	PhoU domain
AhaeAN59_15365	PF13667	ThiC-associated domain 
AhaeAN59_15365	PF01964	Radical SAM ThiC family
AhaeAN59_15370	PF00293	NUDIX domain
AhaeAN59_15375	PF00149	Calcineurin-like phosphoesterase
AhaeAN59_15380	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AhaeAN59_15385	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AhaeAN59_15390	PF01098	Cell cycle protein
AhaeAN59_15395	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_15395	PF08245	Mur ligase middle domain
AhaeAN59_15405	PF07670	Nucleoside recognition
AhaeAN59_15405	PF02421	Ferrous iron transport protein B
AhaeAN59_15405	PF07664	Ferrous iron transport protein B C terminus
AhaeAN59_15415	PF00589	Phage integrase family
AhaeAN59_15415	PF02899	Phage integrase, N-terminal SAM-like domain
AhaeAN59_15420	PF10411	Disulfide bond isomerase protein N-terminus
AhaeAN59_15420	PF13098	Thioredoxin-like domain
AhaeAN59_15425	PF01842	ACT domain
AhaeAN59_15425	PF00742	Homoserine dehydrogenase
AhaeAN59_15425	PF03447	Homoserine dehydrogenase, NAD binding domain
AhaeAN59_15430	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_15435	PF00768	D-alanyl-D-alanine carboxypeptidase
AhaeAN59_15440	PF00196	Bacterial regulatory proteins, luxR family
AhaeAN59_15440	PF00072	Response regulator receiver domain
AhaeAN59_15445	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_15445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_15450	PF00158	Sigma-54 interaction domain
AhaeAN59_15450	PF00072	Response regulator receiver domain
AhaeAN59_15450	PF02954	Bacterial regulatory protein, Fis family
AhaeAN59_15455	PF03572	Peptidase family S41
AhaeAN59_15455	PF13180	PDZ domain
AhaeAN59_15460	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AhaeAN59_15460	PF01676	Metalloenzyme superfamily
AhaeAN59_15465	PF03739	Lipopolysaccharide export system permease LptF/LptG
AhaeAN59_15470	PF03739	Lipopolysaccharide export system permease LptF/LptG
AhaeAN59_15475	PF00883	Cytosol aminopeptidase family, catalytic domain
AhaeAN59_15475	PF02789	Cytosol aminopeptidase family, N-terminal domain
AhaeAN59_15490	PF00677	Lumazine binding domain
AhaeAN59_15495	PF00230	Major intrinsic protein
AhaeAN59_15505	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AhaeAN59_15505	PF01872	RibD C-terminal domain
AhaeAN59_15510	PF03477	ATP cone domain
AhaeAN59_15515	PF00909	Ammonium Transporter Family
AhaeAN59_15520	PF00543	Nitrogen regulatory protein P-II
AhaeAN59_15530	PF13335	Magnesium chelatase, subunit ChlI C-terminal
AhaeAN59_15530	PF01078	Magnesium chelatase, subunit ChlI
AhaeAN59_15615	PF01545	Cation efflux family
AhaeAN59_15615	PF16916	Dimerisation domain of Zinc Transporter
AhaeAN59_15630	PF02321	Outer membrane efflux protein
AhaeAN59_15635	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_15640	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_15640	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_15645	PF01545	Cation efflux family
AhaeAN59_15655	PF13737	Transposase DDE domain
AhaeAN59_15660	PF01022	Bacterial regulatory protein, arsR family
AhaeAN59_15665	PF00403	Heavy-metal-associated domain
AhaeAN59_15670	PF00376	MerR family regulatory protein
AhaeAN59_15670	PF09278	MerR, DNA binding
AhaeAN59_15680	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_15680	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_15680	PF03050	Transposase IS66 family 
AhaeAN59_15680	PF13817	IS66 C-terminal element
AhaeAN59_15700	PF13737	Transposase DDE domain
AhaeAN59_15705	PF13737	Transposase DDE domain
AhaeAN59_15740	PF07690	Major Facilitator Superfamily
AhaeAN59_15760	PF00873	AcrB/AcrD/AcrF family
AhaeAN59_15765	PF00529	HlyD membrane-fusion protein of T1SS
AhaeAN59_15765	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AhaeAN59_15780	PF00111	2Fe-2S iron-sulfur cluster binding domain
AhaeAN59_15830	PF13335	Magnesium chelatase, subunit ChlI C-terminal
AhaeAN59_15830	PF01078	Magnesium chelatase, subunit ChlI
AhaeAN59_15850	PF00719	Inorganic pyrophosphatase
AhaeAN59_15865	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_15865	PF00501	AMP-binding enzyme
AhaeAN59_15870	PF00521	DNA gyrase/topoisomerase IV, subunit A
AhaeAN59_15870	PF03989	DNA gyrase C-terminal domain, beta-propeller
AhaeAN59_15885	PF03458	UPF0126 domain
AhaeAN59_15890	PF02810	SEC-C motif
AhaeAN59_15895	PF03471	Transporter associated domain
AhaeAN59_15895	PF03741	Integral membrane protein TerC family
AhaeAN59_15905	PF03641	Possible lysine decarboxylase
AhaeAN59_15915	PF07690	Major Facilitator Superfamily
AhaeAN59_15925	PF00817	impB/mucB/samB family
AhaeAN59_15925	PF11798	IMS family HHH motif
AhaeAN59_15925	PF11799	impB/mucB/samB family C-terminal domain
AhaeAN59_15940	PF08497	Radical SAM N-terminal
AhaeAN59_15940	PF04055	Radical SAM superfamily
AhaeAN59_15940	PF11842	Domain of unknown function (DUF3362)
AhaeAN59_15955	PF13737	Transposase DDE domain
AhaeAN59_15965	PF07690	Major Facilitator Superfamily
AhaeAN59_15975	PF00291	Pyridoxal-phosphate dependent enzyme
AhaeAN59_15985	PF02690	Na+/Pi-cotransporter
AhaeAN59_16015	PF02028	BCCT, betaine/carnitine/choline family transporter
AhaeAN59_16030	PF00474	Sodium:solute symporter family
AhaeAN59_16035	PF04341	Protein of unknown function, DUF485
AhaeAN59_16040	PF00512	His Kinase A (phospho-acceptor) domain
AhaeAN59_16040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AhaeAN59_16060	PF01327	Polypeptide deformylase
AhaeAN59_16065	PF01476	LysM domain
AhaeAN59_16070	PF17782	DprA winged helix domain
AhaeAN59_16070	PF02481	DNA recombination-mediator protein A
AhaeAN59_16075	PF01300	Telomere recombination
AhaeAN59_16085	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_16090	PF07690	Major Facilitator Superfamily
AhaeAN59_16100	PF00255	Glutathione peroxidase
AhaeAN59_16120	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AhaeAN59_16125	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AhaeAN59_16125	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AhaeAN59_16130	PF00231	ATP synthase
AhaeAN59_16135	PF00306	ATP synthase alpha/beta chain, C terminal domain
AhaeAN59_16135	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AhaeAN59_16135	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AhaeAN59_16140	PF00213	ATP synthase delta (OSCP) subunit
AhaeAN59_16145	PF00430	ATP synthase B/B' CF(0)
AhaeAN59_16150	PF00137	ATP synthase subunit C
AhaeAN59_16155	PF00119	ATP synthase A chain
AhaeAN59_16175	PF00005	ABC transporter
AhaeAN59_16180	PF00950	ABC 3 transport family
AhaeAN59_16185	PF01810	LysE type translocator
AhaeAN59_16190	PF04261	Dyp-type peroxidase family 
AhaeAN59_16195	PF00750	tRNA synthetases class I (R)
AhaeAN59_16195	PF03485	Arginyl tRNA synthetase N terminal domain
AhaeAN59_16195	PF05746	DALR anticodon binding domain
AhaeAN59_16215	PF02678	Pirin
AhaeAN59_16215	PF05726	Pirin C-terminal cupin domain
AhaeAN59_16225	PF01613	Flavin reductase like domain
AhaeAN59_16230	PF08267	Cobalamin-independent synthase, N-terminal domain
AhaeAN59_16230	PF01717	Cobalamin-independent synthase, Catalytic domain
AhaeAN59_16250	PF00145	C-5 cytosine-specific DNA methylase
AhaeAN59_16255	PF00117	Glutamine amidotransferase class-I
AhaeAN59_16255	PF00958	GMP synthase C terminal domain
AhaeAN59_16255	PF02540	NAD synthase
AhaeAN59_16260	PF04286	Protein of unknown function (DUF445)
AhaeAN59_16270	PF07681	DoxX
AhaeAN59_16275	PF09335	SNARE associated Golgi protein
AhaeAN59_16290	PF13614	AAA domain
AhaeAN59_16300	PF01722	BolA-like protein
AhaeAN59_16330	PF07120	Protein of unknown function (DUF1376)
AhaeAN59_16335	PF01695	IstB-like ATP binding protein
AhaeAN59_16340	PF13737	Transposase DDE domain
AhaeAN59_16375	PF13737	Transposase DDE domain
AhaeAN59_16385	PF00145	C-5 cytosine-specific DNA methylase
AhaeAN59_16450	PF07804	HipA-like C-terminal domain
AhaeAN59_16450	PF13657	HipA N-terminal domain
AhaeAN59_16480	PF13737	Transposase DDE domain
AhaeAN59_16515	PF14864	Alkyl sulfatase C-terminal
AhaeAN59_16515	PF14863	Alkyl sulfatase dimerisation
AhaeAN59_16515	PF00753	Metallo-beta-lactamase superfamily
AhaeAN59_16545	PF04411	PD-(D/E)XK nuclease superfamily
AhaeAN59_16555	PF13737	Transposase DDE domain
AhaeAN59_16580	PF05726	Pirin C-terminal cupin domain
AhaeAN59_16580	PF02678	Pirin
AhaeAN59_16590	PF01475	Ferric uptake regulator family
AhaeAN59_16595	PF03551	Transcriptional regulator PadR-like family
AhaeAN59_16630	PF00083	Sugar (and other) transporter
AhaeAN59_16630	PF07690	Major Facilitator Superfamily
AhaeAN59_16635	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_16640	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_16645	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_16645	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_16645	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_16650	PF00501	AMP-binding enzyme
AhaeAN59_16650	PF13193	AMP-binding enzyme C-terminal domain
AhaeAN59_16655	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AhaeAN59_16655	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AhaeAN59_16660	PF00171	Aldehyde dehydrogenase family
AhaeAN59_16665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_16665	PF03466	LysR substrate binding domain
AhaeAN59_16670	PF00324	Amino acid permease
AhaeAN59_16675	PF01042	Endoribonuclease L-PSP
AhaeAN59_16680	PF00842	Alanine racemase, C-terminal domain
AhaeAN59_16680	PF01168	Alanine racemase, N-terminal domain
AhaeAN59_16685	PF01266	FAD dependent oxidoreductase
AhaeAN59_16690	PF01037	Lrp/AsnC ligand binding domain
AhaeAN59_16695	PF07715	TonB-dependent Receptor Plug Domain
AhaeAN59_16695	PF00593	TonB dependent receptor
AhaeAN59_16705	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_16710	PF00849	RNA pseudouridylate synthase
AhaeAN59_16715	PF01113	Dihydrodipicolinate reductase, N-terminus
AhaeAN59_16715	PF05173	Dihydrodipicolinate reductase, C-terminus
AhaeAN59_16730	PF13737	Transposase DDE domain
AhaeAN59_16750	PF00330	Aconitase family (aconitate hydratase)
AhaeAN59_16750	PF00694	Aconitase C-terminal domain
AhaeAN59_16755	PF00285	Citrate synthase, C-terminal domain
AhaeAN59_16770	PF07729	FCD domain
AhaeAN59_16770	PF00392	Bacterial regulatory proteins, gntR family
AhaeAN59_16775	PF00155	Aminotransferase class I and II
AhaeAN59_16780	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AhaeAN59_16780	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AhaeAN59_16780	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AhaeAN59_16780	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AhaeAN59_16785	PF16363	GDP-mannose 4,6 dehydratase
AhaeAN59_16790	PF00342	Phosphoglucose isomerase
AhaeAN59_16795	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AhaeAN59_16795	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AhaeAN59_16795	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AhaeAN59_16800	PF00483	Nucleotidyl transferase
AhaeAN59_16805	PF02719	Polysaccharide biosynthesis protein
AhaeAN59_16810	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AhaeAN59_16815	PF00132	Bacterial transferase hexapeptide (six repeats)
AhaeAN59_16815	PF14602	Hexapeptide repeat of succinyl-transferase
AhaeAN59_16815	PF17836	PglD N-terminal domain
AhaeAN59_16820	PF02397	Bacterial sugar transferase
AhaeAN59_16825	PF01975	Survival protein SurE
AhaeAN59_16865	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AhaeAN59_16865	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AhaeAN59_16865	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AhaeAN59_16870	PF02350	UDP-N-acetylglucosamine 2-epimerase
AhaeAN59_16875	PF02563	Polysaccharide biosynthesis/export protein
AhaeAN59_16875	PF10531	SLBB domain
AhaeAN59_16875	PF18412	Outer-membrane lipoprotein Wza C-terminal domain
AhaeAN59_16880	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AhaeAN59_16885	PF13614	AAA domain
AhaeAN59_16885	PF02706	Chain length determinant protein
AhaeAN59_16885	PF13807	G-rich domain on putative tyrosine kinase
AhaeAN59_16890	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_16890	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AhaeAN59_16895	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AhaeAN59_16895	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_16900	PF03023	Lipid II flippase MurJ
AhaeAN59_16905	PF01510	N-acetylmuramoyl-L-alanine amidase
AhaeAN59_16910	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AhaeAN59_16910	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AhaeAN59_16920	PF01138	3' exoribonuclease family, domain 1
AhaeAN59_16920	PF03725	3' exoribonuclease family, domain 2
AhaeAN59_16925	PF00487	Fatty acid desaturase
AhaeAN59_16930	PF00175	Oxidoreductase NAD-binding domain 
AhaeAN59_16935	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_16940	PF08360	QacR-like protein, C-terminal region
AhaeAN59_16940	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_16945	PF01323	DSBA-like thioredoxin domain
AhaeAN59_16955	PF13419	Haloacid dehalogenase-like hydrolase
AhaeAN59_16960	PF00106	short chain dehydrogenase
AhaeAN59_16970	PF00583	Acetyltransferase (GNAT) family
AhaeAN59_16970	PF00696	Amino acid kinase family
AhaeAN59_16975	PF09084	NMT1/THI5 like
AhaeAN59_16980	PF09084	NMT1/THI5 like
AhaeAN59_16985	PF00296	Luciferase-like monooxygenase
AhaeAN59_16990	PF00528	Binding-protein-dependent transport system inner membrane component
AhaeAN59_16995	PF00005	ABC transporter
AhaeAN59_17000	PF08362	YcdC-like protein, C-terminal region
AhaeAN59_17000	PF00440	Bacterial regulatory proteins, tetR family
AhaeAN59_17005	PF13817	IS66 C-terminal element
AhaeAN59_17005	PF13005	zinc-finger binding domain of transposase IS66 
AhaeAN59_17005	PF13007	Transposase C of IS166 homeodomain
AhaeAN59_17005	PF03050	Transposase IS66 family 
AhaeAN59_17045	PF06574	FAD synthetase
AhaeAN59_17045	PF01687	Riboflavin kinase
AhaeAN59_17050	PF00133	tRNA synthetases class I (I, L, M and V)
AhaeAN59_17050	PF06827	Zinc finger found in FPG and IleRS
AhaeAN59_17050	PF08264	Anticodon-binding domain of tRNA
AhaeAN59_17055	PF01252	Signal peptidase (SPase) II
AhaeAN59_17060	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AhaeAN59_17100	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AhaeAN59_17105	PF07859	alpha/beta hydrolase fold
AhaeAN59_17125	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_17125	PF03466	LysR substrate binding domain
AhaeAN59_17130	PF01025	GrpE
AhaeAN59_17135	PF00012	Hsp70 protein
AhaeAN59_17140	PF12706	Beta-lactamase superfamily domain
AhaeAN59_17165	PF13406	Transglycosylase SLT domain
AhaeAN59_17170	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
AhaeAN59_17170	PF02222	ATP-grasp domain
AhaeAN59_17175	PF00731	AIR carboxylase
AhaeAN59_17190	PF02875	Mur ligase family, glutamate ligase domain
AhaeAN59_17190	PF01225	Mur ligase family, catalytic domain
AhaeAN59_17190	PF08245	Mur ligase middle domain
AhaeAN59_17195	PF00106	short chain dehydrogenase
AhaeAN59_17210	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_17210	PF02770	Acyl-CoA dehydrogenase, middle domain
AhaeAN59_17210	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AhaeAN59_17215	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AhaeAN59_17215	PF03466	LysR substrate binding domain
AhaeAN59_17220	PF03741	Integral membrane protein TerC family
AhaeAN59_17230	PF01979	Amidohydrolase family
AhaeAN59_17235	PF00156	Phosphoribosyl transferase domain
AhaeAN59_17245	PF13098	Thioredoxin-like domain
AhaeAN59_17245	PF10411	Disulfide bond isomerase protein N-terminus
AhaeAN59_17250	PF12631	MnmE helical domain
AhaeAN59_17250	PF10396	GTP-binding protein TrmE N-terminus
AhaeAN59_17250	PF01926	50S ribosome-binding GTPase
AhaeAN59_17255	PF02096	60Kd inner membrane protein
AhaeAN59_17255	PF14849	YidC periplasmic domain
AhaeAN59_17260	PF01809	Putative membrane protein insertion efficiency factor
AhaeAN59_17265	PF00825	Ribonuclease P
AhaeAN59_17270	PF00468	Ribosomal protein L34
AhaeAN59_17300	PF02661	Fic/DOC family
AhaeAN59_17330	PF11798	IMS family HHH motif
AhaeAN59_17330	PF11799	impB/mucB/samB family C-terminal domain
AhaeAN59_17330	PF00817	impB/mucB/samB family
AhaeAN59_17330	PF13438	Domain of unknown function (DUF4113)
AhaeAN59_17335	PF01726	LexA DNA binding domain
AhaeAN59_17335	PF00717	Peptidase S24-like
AhaeAN59_17370	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AhaeAN59_17370	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AhaeAN59_17370	PF00378	Enoyl-CoA hydratase/isomerase
AhaeAN59_17375	PF02803	Thiolase, C-terminal domain
AhaeAN59_17375	PF00108	Thiolase, N-terminal domain
AhaeAN59_17400	PF12833	Helix-turn-helix domain
AhaeAN59_17400	PF02311	AraC-like ligand binding domain
AhaeAN59_17405	PF01625	Peptide methionine sulfoxide reductase
AhaeAN59_17410	PF00462	Glutaredoxin
AhaeAN59_17415	PF01641	SelR domain
AhaeAN59_17425	PF01625	Peptide methionine sulfoxide reductase
AhaeAN59_17430	PF00990	Diguanylate cyclase, GGDEF domain
AhaeAN59_17430	PF08448	PAS fold
AhaeAN59_17445	PF04233	Phage Mu protein F like protein
AhaeAN59_17450	PF13356	Arm DNA-binding domain
AhaeAN59_17450	PF00589	Phage integrase family
AhaeAN59_17475	PF13411	MerR HTH family regulatory protein
AhaeAN59_17485	PF01252	Signal peptidase (SPase) II
AhaeAN59_17490	PF13737	Transposase DDE domain
AhaeAN59_17510	PF13635	Domain of unknown function (DUF4143)
AhaeAN59_17510	PF13173	AAA domain
AhaeAN59_17590	PF11809	Domain of unknown function (DUF3330)
AhaeAN59_17590	PF00563	EAL domain
AhaeAN59_17600	PF05052	MerE protein
AhaeAN59_17605	PF13411	MerR HTH family regulatory protein
AhaeAN59_17610	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AhaeAN59_17610	PF00403	Heavy-metal-associated domain
AhaeAN59_17610	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AhaeAN59_17615	PF03203	MerC mercury resistance protein
AhaeAN59_17620	PF00403	Heavy-metal-associated domain
AhaeAN59_17625	PF02411	MerT mercuric transport protein
AhaeAN59_17630	PF09278	MerR, DNA binding
AhaeAN59_17630	PF00376	MerR family regulatory protein
AhaeAN59_17635	PF13610	DDE domain
AhaeAN59_17645	PF13610	DDE domain
AhaeAN59_17660	PF06100	MCRA family
AhaeAN59_17665	PF08240	Alcohol dehydrogenase GroES-like domain
AhaeAN59_17665	PF00107	Zinc-binding dehydrogenase
AhaeAN59_17685	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AhaeAN59_17690	PF01425	Amidase
AhaeAN59_17705	PF03389	MobA/MobL family
AhaeAN59_17720	PF01051	Initiator Replication protein
