locus-tag class description AHTJR_00005 PF11638 DnaA N-terminal domain AHTJR_00005 PF08299 Bacterial dnaA protein helix-turn-helix AHTJR_00005 PF00308 Bacterial dnaA protein AHTJR_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AHTJR_00010 PF02767 DNA polymerase III beta subunit, central domain AHTJR_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AHTJR_00015 PF02463 RecF/RecN/SMC N terminal domain AHTJR_00020 PF00204 DNA gyrase B AHTJR_00020 PF00986 DNA gyrase B subunit, carboxyl terminus AHTJR_00020 PF18053 DNA gyrase B subunit insert domain AHTJR_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_00020 PF01751 Toprim domain AHTJR_00025 PF09335 SNARE associated Golgi protein AHTJR_00030 PF12848 ABC transporter AHTJR_00030 PF00005 ABC transporter AHTJR_00050 PF01521 Iron-sulphur cluster biosynthesis AHTJR_00055 PF03702 Anhydro-N-acetylmuramic acid kinase AHTJR_00060 PF00579 tRNA synthetases class I (W and Y) AHTJR_00100 PF02080 TrkA-C domain AHTJR_00100 PF03600 Citrate transporter AHTJR_00110 PF00171 Aldehyde dehydrogenase family AHTJR_00115 PF06940 Domain of unknown function (DUF1287) AHTJR_00125 PF00209 Sodium:neurotransmitter symporter family AHTJR_00135 PF01029 NusB family AHTJR_00135 PF01189 16S rRNA methyltransferase RsmB/F AHTJR_00140 PF00551 Formyl transferase AHTJR_00140 PF02911 Formyl transferase, C-terminal domain AHTJR_00145 PF00920 Dehydratase family AHTJR_00160 PF03466 LysR substrate binding domain AHTJR_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_00165 PF00860 Permease family AHTJR_00170 PF00311 Phosphoenolpyruvate carboxylase AHTJR_00180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHTJR_00185 PF00873 AcrB/AcrD/AcrF family AHTJR_00195 PF01556 DnaJ C terminal domain AHTJR_00195 PF00226 DnaJ domain AHTJR_00195 PF00684 DnaJ central domain AHTJR_00200 PF05173 Dihydrodipicolinate reductase, C-terminus AHTJR_00200 PF01113 Dihydrodipicolinate reductase, N-terminus AHTJR_00215 PF00248 Aldo/keto reductase family AHTJR_00220 PF03466 LysR substrate binding domain AHTJR_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_00235 PF08240 Alcohol dehydrogenase GroES-like domain AHTJR_00235 PF00107 Zinc-binding dehydrogenase AHTJR_00240 PF03352 Methyladenine glycosylase AHTJR_00255 PF00633 Helix-hairpin-helix motif AHTJR_00255 PF00730 HhH-GPD superfamily base excision DNA repair protein AHTJR_00255 PF10576 Iron-sulfur binding domain of endonuclease III AHTJR_00255 PF14815 NUDIX domain AHTJR_00265 PF07043 Protein of unknown function (DUF1328) AHTJR_00270 PF03692 Putative zinc- or iron-chelating domain AHTJR_00275 PF07995 Glucose / Sorbosone dehydrogenase AHTJR_00280 PF00144 Beta-lactamase AHTJR_00285 PF00004 ATPase family associated with various cellular activities (AAA) AHTJR_00285 PF16193 AAA C-terminal domain AHTJR_00285 PF12002 MgsA AAA+ ATPase C terminal AHTJR_00290 PF00892 EamA-like transporter family AHTJR_00295 PF01979 Amidohydrolase family AHTJR_00300 PF01259 SAICAR synthetase AHTJR_00310 PF00701 Dihydrodipicolinate synthetase family AHTJR_00315 PF00857 Isochorismatase family AHTJR_00320 PF01037 Lrp/AsnC ligand binding domain AHTJR_00330 PF01380 SIS domain AHTJR_00335 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_00335 PF12804 MobA-like NTP transferase domain AHTJR_00335 PF14602 Hexapeptide repeat of succinyl-transferase AHTJR_00340 PF04608 Phosphatidylglycerophosphatase A AHTJR_00345 PF00586 AIR synthase related protein, N-terminal domain AHTJR_00345 PF02769 AIR synthase related protein, C-terminal domain AHTJR_00350 PF01029 NusB family AHTJR_00355 PF00885 6,7-dimethyl-8-ribityllumazine synthase AHTJR_00360 PF00925 GTP cyclohydrolase II AHTJR_00360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AHTJR_00385 PF02580 D-Tyr-tRNA(Tyr) deacylase AHTJR_00390 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AHTJR_00390 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AHTJR_00395 PF00581 Rhodanese-like domain AHTJR_00400 PF02666 Phosphatidylserine decarboxylase AHTJR_00415 PF00313 'Cold-shock' DNA-binding domain AHTJR_00425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_00425 PF03466 LysR substrate binding domain AHTJR_00435 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_00435 PF00989 PAS fold AHTJR_00435 PF11808 Phosphate regulon sensor protein PhoR AHTJR_00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_00440 PF00072 Response regulator receiver domain AHTJR_00440 PF00486 Transcriptional regulatory protein, C terminal AHTJR_00450 PF00106 short chain dehydrogenase AHTJR_00455 PF01554 MatE AHTJR_00460 PF00155 Aminotransferase class I and II AHTJR_00470 PF04286 Protein of unknown function (DUF445) AHTJR_00485 PF04262 Glutamate-cysteine ligase AHTJR_00490 PF02600 Disulfide bond formation protein DsbB AHTJR_00500 PF05728 Uncharacterised protein family (UPF0227) AHTJR_00505 PF00986 DNA gyrase B subunit, carboxyl terminus AHTJR_00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_00505 PF01751 Toprim domain AHTJR_00505 PF00204 DNA gyrase B AHTJR_00510 PF01554 MatE AHTJR_00520 PF02653 Branched-chain amino acid transport system / permease component AHTJR_00530 PF00005 ABC transporter AHTJR_00530 PF12399 Branched-chain amino acid ATP-binding cassette transporter AHTJR_00535 PF00005 ABC transporter AHTJR_00545 PF00583 Acetyltransferase (GNAT) family AHTJR_00570 PF11412 Disulphide bond corrector protein DsbC AHTJR_00570 PF02683 Cytochrome C biogenesis protein transmembrane region AHTJR_00575 PF02798 Glutathione S-transferase, N-terminal domain AHTJR_00575 PF00043 Glutathione S-transferase, C-terminal domain AHTJR_00580 PF00664 ABC transporter transmembrane region AHTJR_00580 PF00005 ABC transporter AHTJR_00585 PF17151 Periplasmic sensor domain AHTJR_00585 PF00990 Diguanylate cyclase, GGDEF domain AHTJR_00590 PF07859 alpha/beta hydrolase fold AHTJR_00600 PF03960 ArsC family AHTJR_00605 PF03372 Endonuclease/Exonuclease/phosphatase family AHTJR_00610 PF00156 Phosphoribosyl transferase domain AHTJR_00615 PF06594 Haemolysin-type calcium binding protein related domain AHTJR_00615 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AHTJR_00625 PF01047 MarR family AHTJR_00635 PF00255 Glutathione peroxidase AHTJR_00640 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AHTJR_00640 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AHTJR_00650 PF08245 Mur ligase middle domain AHTJR_00650 PF02875 Mur ligase family, glutamate ligase domain AHTJR_00650 PF01225 Mur ligase family, catalytic domain AHTJR_00655 PF07478 D-ala D-ala ligase C-terminus AHTJR_00655 PF01820 D-ala D-ala ligase N-terminus AHTJR_00660 PF08478 POTRA domain, FtsQ-type AHTJR_00660 PF03799 Cell division protein FtsQ AHTJR_00665 PF02491 SHS2 domain inserted in FTSA AHTJR_00670 PF12327 FtsZ family, C-terminal domain AHTJR_00670 PF00091 Tubulin/FtsZ family, GTPase domain AHTJR_00675 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AHTJR_00690 PF00456 Transketolase, thiamine diphosphate binding domain AHTJR_00690 PF17831 Pyruvate dehydrogenase E1 component middle domain AHTJR_00695 PF02817 e3 binding domain AHTJR_00695 PF00364 Biotin-requiring enzyme AHTJR_00695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AHTJR_00710 PF01169 Uncharacterized protein family UPF0016 AHTJR_00715 PF07715 TonB-dependent Receptor Plug Domain AHTJR_00715 PF00593 TonB dependent receptor AHTJR_00720 PF00258 Flavodoxin AHTJR_00720 PF01613 Flavin reductase like domain AHTJR_00725 PF03692 Putative zinc- or iron-chelating domain AHTJR_00730 PF00571 CBS domain AHTJR_00730 PF00478 IMP dehydrogenase / GMP reductase domain AHTJR_00735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AHTJR_00735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AHTJR_00735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AHTJR_00735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AHTJR_00740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AHTJR_00740 PF01243 Pyridoxamine 5'-phosphate oxidase AHTJR_00745 PF17768 RecJ OB domain AHTJR_00745 PF02272 DHHA1 domain AHTJR_00745 PF01368 DHH family AHTJR_00775 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AHTJR_00780 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AHTJR_00790 PF00924 Mechanosensitive ion channel AHTJR_00790 PF05552 Conserved TM helix AHTJR_00795 PF13193 AMP-binding enzyme C-terminal domain AHTJR_00795 PF00501 AMP-binding enzyme AHTJR_00795 PF16177 Acetyl-coenzyme A synthetase N-terminus AHTJR_00800 PF00296 Luciferase-like monooxygenase AHTJR_00805 PF03358 NADPH-dependent FMN reductase AHTJR_00810 PF00072 Response regulator receiver domain AHTJR_00810 PF00196 Bacterial regulatory proteins, luxR family AHTJR_00820 PF00905 Penicillin binding protein transpeptidase domain AHTJR_00845 PF17760 UvrA interaction domain AHTJR_00845 PF17755 UvrA DNA-binding domain AHTJR_00860 PF02581 Thiamine monophosphate synthase AHTJR_00860 PF03070 TENA/THI-4/PQQC family AHTJR_00860 PF08543 Phosphomethylpyrimidine kinase AHTJR_00870 PF07690 Major Facilitator Superfamily AHTJR_00875 PF00436 Single-strand binding protein family AHTJR_00885 PF00324 Amino acid permease AHTJR_00890 PF00392 Bacterial regulatory proteins, gntR family AHTJR_00890 PF00155 Aminotransferase class I and II AHTJR_00895 PF00202 Aminotransferase class-III AHTJR_00900 PF00171 Aldehyde dehydrogenase family AHTJR_00905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_00910 PF00857 Isochorismatase family AHTJR_00915 PF05726 Pirin C-terminal cupin domain AHTJR_00915 PF02678 Pirin AHTJR_00920 PF01593 Flavin containing amine oxidoreductase AHTJR_00940 PF02661 Fic/DOC family AHTJR_00945 PF13784 Fic/DOC family N-terminal AHTJR_00945 PF02661 Fic/DOC family AHTJR_01045 PF18273 Type III R-M EcoP15I C-terminal domain AHTJR_01045 PF01555 DNA methylase AHTJR_01050 PF00665 Integrase core domain AHTJR_01050 PF13936 Helix-turn-helix domain AHTJR_01075 PF13356 Arm DNA-binding domain AHTJR_01075 PF00589 Phage integrase family AHTJR_01085 PF02705 K+ potassium transporter AHTJR_01100 PF00230 Major intrinsic protein AHTJR_01115 PF00977 Histidine biosynthesis protein AHTJR_01120 PF01636 Phosphotransferase enzyme family AHTJR_01140 PF00916 Sulfate permease family AHTJR_01140 PF01740 STAS domain AHTJR_01145 PF00977 Histidine biosynthesis protein AHTJR_01160 PF00117 Glutamine amidotransferase class-I AHTJR_01165 PF00475 Imidazoleglycerol-phosphate dehydratase AHTJR_01195 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AHTJR_01195 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AHTJR_01200 PF00672 HAMP domain AHTJR_01200 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_01200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_01205 PF00072 Response regulator receiver domain AHTJR_01205 PF00486 Transcriptional regulatory protein, C terminal AHTJR_01210 PF17674 HHH domain AHTJR_01210 PF09371 Tex-like protein N-terminal domain AHTJR_01210 PF00575 S1 RNA binding domain AHTJR_01210 PF16921 Tex protein YqgF-like domain AHTJR_01240 PF03466 LysR substrate binding domain AHTJR_01240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_01265 PF00106 short chain dehydrogenase AHTJR_01270 PF01053 Cys/Met metabolism PLP-dependent enzyme AHTJR_01275 PF00005 ABC transporter AHTJR_01275 PF12848 ABC transporter AHTJR_01305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHTJR_01305 PF00529 HlyD membrane-fusion protein of T1SS AHTJR_01310 PF00873 AcrB/AcrD/AcrF family AHTJR_01315 PF01545 Cation efflux family AHTJR_01345 PF00324 Amino acid permease AHTJR_01360 PF00749 tRNA synthetases class I (E and Q), catalytic domain AHTJR_01375 PF01795 MraW methylase family AHTJR_01385 PF03717 Penicillin-binding Protein dimerisation domain AHTJR_01385 PF00905 Penicillin binding protein transpeptidase domain AHTJR_01390 PF01225 Mur ligase family, catalytic domain AHTJR_01390 PF02875 Mur ligase family, glutamate ligase domain AHTJR_01390 PF08245 Mur ligase middle domain AHTJR_01395 PF01225 Mur ligase family, catalytic domain AHTJR_01395 PF02875 Mur ligase family, glutamate ligase domain AHTJR_01395 PF08245 Mur ligase middle domain AHTJR_01400 PF00953 Glycosyl transferase family 4 AHTJR_01405 PF13847 Methyltransferase domain AHTJR_01410 PF00912 Transglycosylase AHTJR_01410 PF00905 Penicillin binding protein transpeptidase domain AHTJR_01410 PF17092 Penicillin-binding protein OB-like domain AHTJR_01435 PF07660 Secretin and TonB N terminus short domain AHTJR_01435 PF03958 Bacterial type II/III secretion system short domain AHTJR_01435 PF00263 Bacterial type II and III secretion system protein AHTJR_01435 PF11741 AMIN domain AHTJR_01440 PF01202 Shikimate kinase AHTJR_01445 PF01761 3-dehydroquinate synthase AHTJR_01455 PF01493 GXGXG motif AHTJR_01455 PF00310 Glutamine amidotransferases class-II AHTJR_01455 PF04898 Glutamate synthase central domain AHTJR_01455 PF01645 Conserved region in glutamate synthase AHTJR_01460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_01460 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AHTJR_01470 PF04011 LemA family AHTJR_01475 PF04536 TPM domain AHTJR_01485 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AHTJR_01490 PF01850 PIN domain AHTJR_01495 PF00114 Pilin (bacterial filament) AHTJR_01495 PF07963 Prokaryotic N-terminal methylation motif AHTJR_01500 PF00144 Beta-lactamase AHTJR_01510 PF01757 Acyltransferase family AHTJR_01515 PF07963 Prokaryotic N-terminal methylation motif AHTJR_01515 PF00114 Pilin (bacterial filament) AHTJR_01525 PF11846 Virulence factor membrane-bound polymerase, C-terminal AHTJR_01525 PF15864 Protein glycosylation ligase AHTJR_01525 PF04932 O-Antigen ligase AHTJR_01530 PF00210 Ferritin-like domain AHTJR_01535 PF04324 BFD-like [2Fe-2S] binding domain AHTJR_01540 PF01042 Endoribonuclease L-PSP AHTJR_01545 PF04607 Region found in RelA / SpoT proteins AHTJR_01545 PF13291 ACT domain AHTJR_01545 PF02824 TGS domain AHTJR_01550 PF01192 RNA polymerase Rpb6 AHTJR_01555 PF00625 Guanylate kinase AHTJR_01560 PF02401 LytB protein AHTJR_01590 PF07963 Prokaryotic N-terminal methylation motif AHTJR_01625 PF07963 Prokaryotic N-terminal methylation motif AHTJR_01625 PF00114 Pilin (bacterial filament) AHTJR_01630 PF00886 Ribosomal protein S16 AHTJR_01635 PF01782 RimM N-terminal domain AHTJR_01635 PF05239 PRC-barrel domain AHTJR_01640 PF01746 tRNA (Guanine-1)-methyltransferase AHTJR_01645 PF01245 Ribosomal protein L19 AHTJR_01650 PF00561 alpha/beta hydrolase fold AHTJR_01655 PF03280 Proteobacterial lipase chaperone protein AHTJR_01660 PF09157 Pseudouridine synthase II TruB, C-terminal AHTJR_01660 PF16198 tRNA pseudouridylate synthase B C-terminal domain AHTJR_01660 PF01509 TruB family pseudouridylate synthase (N terminal domain) AHTJR_01665 PF01925 Sulfite exporter TauE/SafE AHTJR_01675 PF00892 EamA-like transporter family AHTJR_01680 PF00892 EamA-like transporter family AHTJR_01685 PF01551 Peptidase family M23 AHTJR_01685 PF01464 Transglycosylase SLT domain AHTJR_01685 PF10145 Phage-related minor tail protein AHTJR_01690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AHTJR_01690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AHTJR_01695 PF02913 FAD linked oxidases, C-terminal domain AHTJR_01695 PF01565 FAD binding domain AHTJR_01710 PF03992 Antibiotic biosynthesis monooxygenase AHTJR_01715 PF02525 Flavodoxin-like fold AHTJR_01725 PF07690 Major Facilitator Superfamily AHTJR_01730 PF12805 FUSC-like inner membrane protein yccS AHTJR_01735 PF01594 AI-2E family transporter AHTJR_01740 PF13614 AAA domain AHTJR_01750 PF01209 ubiE/COQ5 methyltransferase family AHTJR_01765 PF08241 Methyltransferase domain AHTJR_01790 PF00743 Flavin-binding monooxygenase-like AHTJR_01805 PF05746 DALR anticodon binding domain AHTJR_01805 PF02092 Glycyl-tRNA synthetase beta subunit AHTJR_01810 PF02091 Glycyl-tRNA synthetase alpha subunit AHTJR_01830 PF00939 Sodium:sulfate symporter transmembrane region AHTJR_01840 PF04024 PspC domain AHTJR_01850 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_01850 PF12806 Acetyl-CoA dehydrogenase C-terminal like AHTJR_01850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_01850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_01860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AHTJR_01860 PF01488 Shikimate / quinate 5-dehydrogenase AHTJR_01860 PF08501 Shikimate dehydrogenase substrate binding domain AHTJR_01865 PF00300 Histidine phosphatase superfamily (branch 1) AHTJR_01875 PF00925 GTP cyclohydrolase II AHTJR_01880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AHTJR_01880 PF02779 Transketolase, pyrimidine binding domain AHTJR_01880 PF02780 Transketolase, C-terminal domain AHTJR_01885 PF00459 Inositol monophosphatase family AHTJR_01890 PF01202 Shikimate kinase AHTJR_01895 PF00270 DEAD/DEAH box helicase AHTJR_01895 PF00271 Helicase conserved C-terminal domain AHTJR_01895 PF03880 DbpA RNA binding domain AHTJR_01895 PF12343 Cold shock protein DEAD box A AHTJR_01900 PF00005 ABC transporter AHTJR_01905 PF02405 Permease MlaE AHTJR_01910 PF02470 MlaD protein AHTJR_01915 PF05494 MlaC protein AHTJR_01930 PF01544 CorA-like Mg2+ transporter protein AHTJR_01935 PF03641 Possible lysine decarboxylase AHTJR_01945 PF00156 Phosphoribosyl transferase domain AHTJR_01950 PF17191 RecG wedge domain AHTJR_01950 PF00271 Helicase conserved C-terminal domain AHTJR_01950 PF00270 DEAD/DEAH box helicase AHTJR_01965 PF01553 Acyltransferase AHTJR_01990 PF01926 50S ribosome-binding GTPase AHTJR_01995 PF02082 Transcriptional regulator AHTJR_02000 PF00042 Globin AHTJR_02000 PF00175 Oxidoreductase NAD-binding domain AHTJR_02000 PF00970 Oxidoreductase FAD-binding domain AHTJR_02005 PF05872 Bacterial protein of unknown function (DUF853) AHTJR_02010 PF01053 Cys/Met metabolism PLP-dependent enzyme AHTJR_02015 PF00117 Glutamine amidotransferase class-I AHTJR_02020 PF00338 Ribosomal protein S10p/S20e AHTJR_02025 PF00297 Ribosomal protein L3 AHTJR_02030 PF00573 Ribosomal protein L4/L1 family AHTJR_02035 PF00276 Ribosomal protein L23 AHTJR_02040 PF00181 Ribosomal Proteins L2, RNA binding domain AHTJR_02040 PF03947 Ribosomal Proteins L2, C-terminal domain AHTJR_02045 PF00203 Ribosomal protein S19 AHTJR_02050 PF00237 Ribosomal protein L22p/L17e AHTJR_02055 PF00189 Ribosomal protein S3, C-terminal domain AHTJR_02055 PF07650 KH domain AHTJR_02060 PF00252 Ribosomal protein L16p/L10e AHTJR_02065 PF00831 Ribosomal L29 protein AHTJR_02070 PF00366 Ribosomal protein S17 AHTJR_02075 PF00238 Ribosomal protein L14p/L23e AHTJR_02080 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AHTJR_02080 PF00467 KOW motif AHTJR_02085 PF00673 ribosomal L5P family C-terminus AHTJR_02085 PF00281 Ribosomal protein L5 AHTJR_02090 PF00253 Ribosomal protein S14p/S29e AHTJR_02095 PF00410 Ribosomal protein S8 AHTJR_02100 PF00347 Ribosomal protein L6 AHTJR_02105 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AHTJR_02110 PF00333 Ribosomal protein S5, N-terminal domain AHTJR_02110 PF03719 Ribosomal protein S5, C-terminal domain AHTJR_02115 PF00327 Ribosomal protein L30p/L7e AHTJR_02120 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AHTJR_02125 PF00344 SecY translocase AHTJR_02130 PF00444 Ribosomal protein L36 AHTJR_02135 PF00416 Ribosomal protein S13/S18 AHTJR_02140 PF00411 Ribosomal protein S11 AHTJR_02145 PF00163 Ribosomal protein S4/S9 N-terminal domain AHTJR_02145 PF01479 S4 domain AHTJR_02150 PF01000 RNA polymerase Rpb3/RpoA insert domain AHTJR_02150 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AHTJR_02150 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AHTJR_02155 PF01196 Ribosomal protein L17 AHTJR_02165 PF00743 Flavin-binding monooxygenase-like AHTJR_02175 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_02175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_02175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_02180 PF03937 Flavinator of succinate dehydrogenase AHTJR_02205 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AHTJR_02210 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) AHTJR_02230 PF01432 Peptidase family M3 AHTJR_02235 PF00773 RNB domain AHTJR_02235 PF08206 Ribonuclease B OB domain AHTJR_02235 PF17876 Cold shock domain AHTJR_02235 PF00575 S1 RNA binding domain AHTJR_02235 PF08461 Ribonuclease R winged-helix domain AHTJR_02260 PF01970 Tripartite tricarboxylate transporter TctA family AHTJR_02285 PF00665 Integrase core domain AHTJR_02285 PF13936 Helix-turn-helix domain AHTJR_02325 PF01557 Fumarylacetoacetate (FAA) hydrolase family AHTJR_02335 PF12833 Helix-turn-helix domain AHTJR_02345 PF03631 Virulence factor BrkB AHTJR_02350 PF03358 NADPH-dependent FMN reductase AHTJR_02355 PF01790 Prolipoprotein diacylglyceryl transferase AHTJR_02370 PF00902 Sec-independent protein translocase protein (TatC) AHTJR_02375 PF02416 mttA/Hcf106 family AHTJR_02380 PF02416 mttA/Hcf106 family AHTJR_02385 PF01725 Ham1 family AHTJR_02400 PF00561 alpha/beta hydrolase fold AHTJR_02400 PF07021 Methionine biosynthesis protein MetW AHTJR_02405 PF00561 alpha/beta hydrolase fold AHTJR_02410 PF00682 HMGL-like AHTJR_02410 PF08502 LeuA allosteric (dimerisation) domain AHTJR_02415 PF07715 TonB-dependent Receptor Plug Domain AHTJR_02415 PF00593 TonB dependent receptor AHTJR_02420 PF05698 Bacterial trigger factor protein (TF) C-terminus AHTJR_02420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AHTJR_02420 PF05697 Bacterial trigger factor protein (TF) AHTJR_02425 PF00574 Clp protease AHTJR_02430 PF06689 ClpX C4-type zinc finger AHTJR_02430 PF10431 C-terminal, D2-small domain, of ClpB protein AHTJR_02430 PF07724 AAA domain (Cdc48 subfamily) AHTJR_02445 PF05683 Fumarase C-terminus AHTJR_02445 PF05681 Fumarate hydratase (Fumerase) AHTJR_02450 PF12833 Helix-turn-helix domain AHTJR_02450 PF02311 AraC-like ligand binding domain AHTJR_02455 PF00892 EamA-like transporter family AHTJR_02470 PF07085 DRTGG domain AHTJR_02470 PF01515 Phosphate acetyl/butaryl transferase AHTJR_02475 PF00871 Acetokinase family AHTJR_02480 PF00171 Aldehyde dehydrogenase family AHTJR_02495 PF00933 Glycosyl hydrolase family 3 N terminal domain AHTJR_02500 PF03572 Peptidase family S41 AHTJR_02500 PF00595 PDZ domain AHTJR_02500 PF11818 C-terminal domain of tail specific protease (DUF3340) AHTJR_02500 PF17804 Tail specific protease N-terminal domain AHTJR_02520 PF16360 GTP-binding GTPase Middle Region AHTJR_02520 PF13167 GTP-binding GTPase N-terminal AHTJR_02520 PF01926 50S ribosome-binding GTPase AHTJR_02530 PF13091 PLD-like domain AHTJR_02535 PF10518 TAT (twin-arginine translocation) pathway signal sequence AHTJR_02535 PF00149 Calcineurin-like phosphoesterase AHTJR_02540 PF01389 OmpA-like transmembrane domain AHTJR_02540 PF00691 OmpA family AHTJR_02545 PF17152 Periplasmic sensor domain AHTJR_02545 PF00990 Diguanylate cyclase, GGDEF domain AHTJR_02580 PF01594 AI-2E family transporter AHTJR_02585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_02585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_02585 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_02600 PF17932 Tetracyclin repressor-like, C-terminal domain AHTJR_02600 PF00440 Bacterial regulatory proteins, tetR family AHTJR_02615 PF01039 Carboxyl transferase domain AHTJR_02620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_02620 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_02620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_02630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AHTJR_02630 PF00289 Biotin carboxylase, N-terminal domain AHTJR_02630 PF02785 Biotin carboxylase C-terminal domain AHTJR_02630 PF00364 Biotin-requiring enzyme AHTJR_02645 PF00572 Ribosomal protein L13 AHTJR_02650 PF00380 Ribosomal protein S9/S16 AHTJR_02655 PF00043 Glutathione S-transferase, C-terminal domain AHTJR_02655 PF02798 Glutathione S-transferase, N-terminal domain AHTJR_02660 PF04386 Stringent starvation protein B AHTJR_02690 PF03372 Endonuclease/Exonuclease/phosphatase family AHTJR_02710 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AHTJR_02715 PF00398 Ribosomal RNA adenine dimethylase AHTJR_02720 PF00149 Calcineurin-like phosphoesterase AHTJR_02730 PF00534 Glycosyl transferases group 1 AHTJR_02730 PF13439 Glycosyltransferase Family 4 AHTJR_02735 PF01569 PAP2 superfamily AHTJR_02740 PF04384 Iron-sulphur cluster assembly AHTJR_02745 PF00334 Nucleoside diphosphate kinase AHTJR_02750 PF04055 Radical SAM superfamily AHTJR_02760 PF13464 Domain of unknown function (DUF4115) AHTJR_02765 PF04551 GcpE protein AHTJR_02770 PF03129 Anticodon binding domain AHTJR_02770 PF13393 Histidyl-tRNA synthetase AHTJR_02780 PF13360 PQQ-like domain AHTJR_02785 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AHTJR_02785 PF01926 50S ribosome-binding GTPase AHTJR_02795 PF02355 Protein export membrane protein AHTJR_02795 PF07549 SecD/SecF GG Motif AHTJR_02800 PF02355 Protein export membrane protein AHTJR_02800 PF13721 SecD export protein N-terminal TM region AHTJR_02800 PF07549 SecD/SecF GG Motif AHTJR_02805 PF02699 Preprotein translocase subunit AHTJR_02830 PF02547 Queuosine biosynthesis protein AHTJR_02840 PF00672 HAMP domain AHTJR_02840 PF18698 Histidine kinase sensor domain AHTJR_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_02840 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_02845 PF08335 GlnD PII-uridylyltransferase AHTJR_02845 PF03710 Glutamate-ammonia ligase adenylyltransferase AHTJR_02850 PF01063 Amino-transferase class IV AHTJR_02855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AHTJR_02855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AHTJR_02855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AHTJR_02890 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AHTJR_02900 PF00535 Glycosyl transferase family 2 AHTJR_02905 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AHTJR_02920 PF05523 WxcM-like, C-terminal AHTJR_02925 PF00483 Nucleotidyl transferase AHTJR_02930 PF16363 GDP-mannose 4,6 dehydratase AHTJR_02945 PF02938 GAD domain AHTJR_02945 PF01336 OB-fold nucleic acid binding domain AHTJR_02945 PF00152 tRNA synthetases class II (D, K and N) AHTJR_02955 PF07715 TonB-dependent Receptor Plug Domain AHTJR_02955 PF00593 TonB dependent receptor AHTJR_02980 PF06146 Phosphate-starvation-inducible E AHTJR_02985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_02985 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_02985 PF12806 Acetyl-CoA dehydrogenase C-terminal like AHTJR_02985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_02990 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_02990 PF12806 Acetyl-CoA dehydrogenase C-terminal like AHTJR_02990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_02990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_03000 PF00672 HAMP domain AHTJR_03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_03000 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_03005 PF00072 Response regulator receiver domain AHTJR_03005 PF00486 Transcriptional regulatory protein, C terminal AHTJR_03040 PF01923 Cobalamin adenosyltransferase AHTJR_03045 PF07715 TonB-dependent Receptor Plug Domain AHTJR_03045 PF00593 TonB dependent receptor AHTJR_03050 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AHTJR_03055 PF00291 Pyridoxal-phosphate dependent enzyme AHTJR_03060 PF00149 Calcineurin-like phosphoesterase AHTJR_03085 PF00290 Tryptophan synthase alpha chain AHTJR_03090 PF01039 Carboxyl transferase domain AHTJR_03095 PF08245 Mur ligase middle domain AHTJR_03095 PF02875 Mur ligase family, glutamate ligase domain AHTJR_03110 PF10417 C-terminal domain of 1-Cys peroxiredoxin AHTJR_03110 PF00578 AhpC/TSA family AHTJR_03115 PF01043 SecA preprotein cross-linking domain AHTJR_03115 PF07517 SecA DEAD-like domain AHTJR_03115 PF02810 SEC-C motif AHTJR_03115 PF07516 SecA Wing and Scaffold domain AHTJR_03130 PF00083 Sugar (and other) transporter AHTJR_03130 PF07690 Major Facilitator Superfamily AHTJR_03135 PF03006 Haemolysin-III related AHTJR_03145 PF13673 Acetyltransferase (GNAT) domain AHTJR_03165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AHTJR_03165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AHTJR_03165 PF00378 Enoyl-CoA hydratase/isomerase AHTJR_03170 PF00108 Thiolase, N-terminal domain AHTJR_03170 PF02803 Thiolase, C-terminal domain AHTJR_03180 PF02311 AraC-like ligand binding domain AHTJR_03180 PF12833 Helix-turn-helix domain AHTJR_03185 PF02515 CoA-transferase family III AHTJR_03190 PF13737 Transposase DDE domain AHTJR_03215 PF01551 Peptidase family M23 AHTJR_03215 PF04225 Opacity-associated protein A LysM-like domain AHTJR_03230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AHTJR_03230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AHTJR_03245 PF02803 Thiolase, C-terminal domain AHTJR_03245 PF00108 Thiolase, N-terminal domain AHTJR_03255 PF13505 Outer membrane protein beta-barrel domain AHTJR_03255 PF00691 OmpA family AHTJR_03265 PF00691 OmpA family AHTJR_03265 PF13505 Outer membrane protein beta-barrel domain AHTJR_03270 PF01139 tRNA-splicing ligase RtcB AHTJR_03275 PF00324 Amino acid permease AHTJR_03280 PF08468 Methyltransferase small domain N-terminal AHTJR_03280 PF05175 Methyltransferase small domain AHTJR_03285 PF00860 Permease family AHTJR_03300 PF01741 Large-conductance mechanosensitive channel, MscL AHTJR_03310 PF09312 SurA N-terminal domain AHTJR_03310 PF00639 PPIC-type PPIASE domain AHTJR_03315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AHTJR_03315 PF06827 Zinc finger found in FPG and IleRS AHTJR_03315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AHTJR_03320 PF07715 TonB-dependent Receptor Plug Domain AHTJR_03320 PF00593 TonB dependent receptor AHTJR_03330 PF01571 Aminomethyltransferase folate-binding domain AHTJR_03340 PF08274 PhnA Zinc-Ribbon AHTJR_03340 PF03831 PhnA domain AHTJR_03345 PF07411 Domain of unknown function (DUF1508) AHTJR_03350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AHTJR_03350 PF04073 Aminoacyl-tRNA editing domain AHTJR_03350 PF03129 Anticodon binding domain AHTJR_03360 PF00072 Response regulator receiver domain AHTJR_03365 PF00072 Response regulator receiver domain AHTJR_03370 PF01584 CheW-like domain AHTJR_03375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AHTJR_03375 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AHTJR_03380 PF01627 Hpt domain AHTJR_03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_03380 PF01584 CheW-like domain AHTJR_03380 PF07194 P2 response regulator binding domain AHTJR_03380 PF01627 Hpt domain AHTJR_03380 PF01584 CheW-like domain AHTJR_03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_03380 PF07194 P2 response regulator binding domain AHTJR_03380 PF02895 Signal transducing histidine kinase, homodimeric domain AHTJR_03380 PF02895 Signal transducing histidine kinase, homodimeric domain AHTJR_03390 PF07687 Peptidase dimerisation domain AHTJR_03390 PF01546 Peptidase family M20/M25/M40 AHTJR_03395 PF08085 Entericidin EcnA/B family AHTJR_03405 PF04304 Protein of unknown function (DUF454) AHTJR_03410 PF17969 L,D-transpeptidase C-terminal domain AHTJR_03410 PF03734 L,D-transpeptidase catalytic domain AHTJR_03455 PF00175 Oxidoreductase NAD-binding domain AHTJR_03455 PF00258 Flavodoxin AHTJR_03455 PF00667 FAD binding domain AHTJR_03465 PF12805 FUSC-like inner membrane protein yccS AHTJR_03475 PF00881 Nitroreductase family AHTJR_03485 PF03616 Sodium/glutamate symporter AHTJR_03490 PF01235 Sodium:alanine symporter family AHTJR_03495 PF01734 Patatin-like phospholipase AHTJR_03500 PF05992 SbmA/BacA-like family AHTJR_03515 PF03466 LysR substrate binding domain AHTJR_03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_03545 PF02637 GatB domain AHTJR_03545 PF02934 GatB/GatE catalytic domain AHTJR_03550 PF01425 Amidase AHTJR_03555 PF02686 Glu-tRNAGln amidotransferase C subunit AHTJR_03565 PF04085 rod shape-determining protein MreC AHTJR_03575 PF02545 Maf-like protein AHTJR_03580 PF10150 Ribonuclease E/G family AHTJR_03580 PF00575 S1 RNA binding domain AHTJR_03590 PF06974 Protein of unknown function (DUF1298) AHTJR_03590 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AHTJR_03595 PF01507 Phosphoadenosine phosphosulfate reductase family AHTJR_03625 PF02669 K+-transporting ATPase, c chain AHTJR_03630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_03630 PF02702 Osmosensitive K+ channel His kinase sensor domain AHTJR_03630 PF13493 Domain of unknown function (DUF4118) AHTJR_03630 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_03635 PF00072 Response regulator receiver domain AHTJR_03635 PF00486 Transcriptional regulatory protein, C terminal AHTJR_03640 PF00171 Aldehyde dehydrogenase family AHTJR_03645 PF01569 PAP2 superfamily AHTJR_03655 PF00111 2Fe-2S iron-sulfur cluster binding domain AHTJR_03655 PF00175 Oxidoreductase NAD-binding domain AHTJR_03660 PF00355 Rieske [2Fe-2S] domain AHTJR_03665 PF07690 Major Facilitator Superfamily AHTJR_03670 PF03573 outer membrane porin, OprD family AHTJR_03680 PF00324 Amino acid permease AHTJR_03690 PF00348 Polyprenyl synthetase AHTJR_03695 PF01145 SPFH domain / Band 7 family AHTJR_03705 PF01734 Patatin-like phospholipase AHTJR_03730 PF00884 Sulfatase AHTJR_03730 PF08019 Phosphoethanolamine transferase EptA/EptB AHTJR_03735 PF00072 Response regulator receiver domain AHTJR_03735 PF00486 Transcriptional regulatory protein, C terminal AHTJR_03740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_03740 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_03740 PF08521 Two-component sensor kinase N-terminal AHTJR_03750 PF00005 ABC transporter AHTJR_03755 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_03760 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_03765 PF00497 Bacterial extracellular solute-binding proteins, family 3 AHTJR_03785 PF04480 Protein of unknown function (DUF559) AHTJR_03795 PF13737 Transposase DDE domain AHTJR_03805 PF00133 tRNA synthetases class I (I, L, M and V) AHTJR_03805 PF10458 Valyl tRNA synthetase tRNA binding arm AHTJR_03805 PF08264 Anticodon-binding domain of tRNA AHTJR_03830 PF01906 Putative heavy-metal-binding AHTJR_03835 PF01906 Putative heavy-metal-binding AHTJR_03840 PF02321 Outer membrane efflux protein AHTJR_03845 PF00873 AcrB/AcrD/AcrF family AHTJR_03850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHTJR_03850 PF00529 HlyD membrane-fusion protein of T1SS AHTJR_03855 PF01569 PAP2 superfamily AHTJR_03870 PF00829 Ribosomal prokaryotic L21 protein AHTJR_03875 PF01016 Ribosomal L27 protein AHTJR_03880 PF02678 Pirin AHTJR_03880 PF05726 Pirin C-terminal cupin domain AHTJR_03885 PF03548 Outer membrane lipoprotein carrier protein LolA AHTJR_03895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AHTJR_03895 PF02403 Seryl-tRNA synthetase N-terminal domain AHTJR_03900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AHTJR_03900 PF14824 Sirohaem biosynthesis protein central AHTJR_03900 PF10414 Sirohaem synthase dimerisation region AHTJR_03905 PF00588 SpoU rRNA Methylase family AHTJR_03915 PF01638 HxlR-like helix-turn-helix AHTJR_03920 PF03358 NADPH-dependent FMN reductase AHTJR_03925 PF13520 Amino acid permease AHTJR_03930 PF00465 Iron-containing alcohol dehydrogenase AHTJR_03940 PF03099 Biotin/lipoate A/B protein ligase family AHTJR_03945 PF04359 Protein of unknown function (DUF493) AHTJR_03950 PF04542 Sigma-70 region 2 AHTJR_03950 PF03979 Sigma-70 factor, region 1.1 AHTJR_03950 PF04545 Sigma-70, region 4 AHTJR_03950 PF04546 Sigma-70, non-essential region AHTJR_03950 PF00140 Sigma-70 factor, region 1.2 AHTJR_03950 PF04539 Sigma-70 region 3 AHTJR_03975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_03975 PF03466 LysR substrate binding domain AHTJR_03980 PF05724 Thiopurine S-methyltransferase (TPMT) AHTJR_03985 PF09335 SNARE associated Golgi protein AHTJR_04000 PF00285 Citrate synthase, C-terminal domain AHTJR_04005 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AHTJR_04010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AHTJR_04015 PF00890 FAD binding domain AHTJR_04015 PF02910 Fumarate reductase flavoprotein C-term AHTJR_04020 PF13085 2Fe-2S iron-sulfur cluster binding domain AHTJR_04030 PF00676 Dehydrogenase E1 component AHTJR_04030 PF02779 Transketolase, pyrimidine binding domain AHTJR_04030 PF16870 2-oxoglutarate dehydrogenase C-terminal AHTJR_04030 PF16078 2-oxoglutarate dehydrogenase N-terminus AHTJR_04035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AHTJR_04035 PF00364 Biotin-requiring enzyme AHTJR_04035 PF02817 e3 binding domain AHTJR_04040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AHTJR_04040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_04045 PF08442 ATP-grasp domain AHTJR_04045 PF00549 CoA-ligase AHTJR_04050 PF00549 CoA-ligase AHTJR_04050 PF02629 CoA binding domain AHTJR_04055 PF01145 SPFH domain / Band 7 family AHTJR_04055 PF15975 Flotillin AHTJR_04060 PF07290 Protein of unknown function (DUF1449) AHTJR_04065 PF00579 tRNA synthetases class I (W and Y) AHTJR_04070 PF05661 Protein of unknown function (DUF808) AHTJR_04075 PF04228 Putative neutral zinc metallopeptidase AHTJR_04085 PF13737 Transposase DDE domain AHTJR_04110 PF01225 Mur ligase family, catalytic domain AHTJR_04110 PF02875 Mur ligase family, glutamate ligase domain AHTJR_04110 PF08245 Mur ligase middle domain AHTJR_04115 PF02875 Mur ligase family, glutamate ligase domain AHTJR_04115 PF08245 Mur ligase middle domain AHTJR_04115 PF01225 Mur ligase family, catalytic domain AHTJR_04125 PF02875 Mur ligase family, glutamate ligase domain AHTJR_04125 PF08245 Mur ligase middle domain AHTJR_04125 PF01225 Mur ligase family, catalytic domain AHTJR_04135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AHTJR_04145 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_04155 PF01272 Transcription elongation factor, GreA/GreB, C-term AHTJR_04155 PF03449 Transcription elongation factor, N-terminal AHTJR_04160 PF02142 MGS-like domain AHTJR_04160 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AHTJR_04160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AHTJR_04165 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AHTJR_04165 PF00117 Glutamine amidotransferase class-I AHTJR_04180 PF01985 CRS1 / YhbY (CRM) domain AHTJR_04185 PF01728 FtsJ-like methyltransferase AHTJR_04190 PF00004 ATPase family associated with various cellular activities (AAA) AHTJR_04190 PF01434 Peptidase family M41 AHTJR_04190 PF06480 FtsH Extracellular AHTJR_04190 PF17862 AAA+ lid domain AHTJR_04195 PF00809 Pterin binding enzyme AHTJR_04200 PF12450 von Willebrand factor AHTJR_04200 PF00092 von Willebrand factor type A domain AHTJR_04200 PF12034 Domain of unknown function (DUF3520) AHTJR_04210 PF00561 alpha/beta hydrolase fold AHTJR_04220 PF04973 Nicotinamide mononucleotide transporter AHTJR_04225 PF03009 Glycerophosphoryl diester phosphodiesterase family AHTJR_04230 PF00884 Sulfatase AHTJR_04250 PF03448 MgtE intracellular N domain AHTJR_04250 PF01769 Divalent cation transporter AHTJR_04250 PF00571 CBS domain AHTJR_04260 PF01435 Peptidase family M48 AHTJR_04265 PF01551 Peptidase family M23 AHTJR_04265 PF01464 Transglycosylase SLT domain AHTJR_04265 PF10145 Phage-related minor tail protein AHTJR_04270 PF01171 PP-loop family AHTJR_04280 PF01464 Transglycosylase SLT domain AHTJR_04280 PF00497 Bacterial extracellular solute-binding proteins, family 3 AHTJR_04285 PF01272 Transcription elongation factor, GreA/GreB, C-term AHTJR_04285 PF03449 Transcription elongation factor, N-terminal AHTJR_04305 PF00691 OmpA family AHTJR_04305 PF04972 BON domain AHTJR_04320 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_04325 PF00005 ABC transporter AHTJR_04325 PF03459 TOBE domain AHTJR_04335 PF09828 Chromate resistance exported protein AHTJR_04340 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AHTJR_04345 PF00005 ABC transporter AHTJR_04350 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_04355 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AHTJR_04370 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal AHTJR_04370 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal AHTJR_04375 PF01565 FAD binding domain AHTJR_04375 PF04030 D-arabinono-1,4-lactone oxidase AHTJR_04385 PF00582 Universal stress protein family AHTJR_04400 PF01327 Polypeptide deformylase AHTJR_04405 PF04480 Protein of unknown function (DUF559) AHTJR_04420 PF02574 Homocysteine S-methyltransferase AHTJR_04420 PF02965 Vitamin B12 dependent methionine synthase, activation domain AHTJR_04420 PF02310 B12 binding domain AHTJR_04420 PF00809 Pterin binding enzyme AHTJR_04420 PF02607 B12 binding domain AHTJR_04430 PF01384 Phosphate transporter family AHTJR_04455 PF18073 Rubredoxin metal binding domain AHTJR_04460 PF01235 Sodium:alanine symporter family AHTJR_04470 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AHTJR_04470 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AHTJR_04475 PF01678 Diaminopimelate epimerase AHTJR_04480 PF00561 alpha/beta hydrolase fold AHTJR_04485 PF01810 LysE type translocator AHTJR_04490 PF02899 Phage integrase, N-terminal SAM-like domain AHTJR_04490 PF00589 Phage integrase family AHTJR_04495 PF01012 Electron transfer flavoprotein domain AHTJR_04500 PF01012 Electron transfer flavoprotein domain AHTJR_04500 PF00766 Electron transfer flavoprotein FAD-binding domain AHTJR_04515 PF03989 DNA gyrase C-terminal domain, beta-propeller AHTJR_04515 PF00521 DNA gyrase/topoisomerase IV, subunit A AHTJR_04530 PF13533 Biotin-lipoyl like AHTJR_04540 PF00266 Aminotransferase class-V AHTJR_04560 PF02954 Bacterial regulatory protein, Fis family AHTJR_04570 PF12684 PDDEXK-like domain of unknown function (DUF3799) AHTJR_04570 PF06630 Enterobacterial exodeoxyribonuclease VIII AHTJR_04690 PF00583 Acetyltransferase (GNAT) family AHTJR_04760 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AHTJR_04775 PF12704 MacB-like periplasmic core domain AHTJR_04775 PF02687 FtsX-like permease family AHTJR_04780 PF00005 ABC transporter AHTJR_04785 PF13567 Domain of unknown function (DUF4131) AHTJR_04785 PF03772 Competence protein AHTJR_04785 PF00753 Metallo-beta-lactamase superfamily AHTJR_04795 PF01343 Peptidase family S49 AHTJR_04795 PF06965 Na+/H+ antiporter 1 AHTJR_04805 PF00551 Formyl transferase AHTJR_04810 PF02769 AIR synthase related protein, C-terminal domain AHTJR_04810 PF00586 AIR synthase related protein, N-terminal domain AHTJR_04815 PF01594 AI-2E family transporter AHTJR_04820 PF00308 Bacterial dnaA protein AHTJR_04820 PF08299 Bacterial dnaA protein helix-turn-helix AHTJR_04820 PF11638 DnaA N-terminal domain AHTJR_04855 PF00588 SpoU rRNA Methylase family AHTJR_04855 PF08032 RNA 2'-O ribose methyltransferase substrate binding AHTJR_04860 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AHTJR_04870 PF00691 OmpA family AHTJR_04875 PF07676 WD40-like Beta Propeller Repeat AHTJR_04875 PF04052 TolB amino-terminal domain AHTJR_04885 PF02472 Biopolymer transport protein ExbD/TolR AHTJR_04890 PF01618 MotA/TolQ/ExbB proton channel family AHTJR_04895 PF03061 Thioesterase superfamily AHTJR_04905 PF05496 Holliday junction DNA helicase RuvB P-loop domain AHTJR_04905 PF05491 RuvB C-terminal winged helix domain AHTJR_04905 PF17864 RuvB AAA lid domain AHTJR_04910 PF07499 RuvA, C-terminal domain AHTJR_04910 PF01330 RuvA N terminal domain AHTJR_04915 PF01966 HD domain AHTJR_04920 PF02769 AIR synthase related protein, C-terminal domain AHTJR_04920 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AHTJR_04920 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AHTJR_04930 PF01784 NIF3 (NGG1p interacting factor 3) AHTJR_04935 PF00881 Nitroreductase family AHTJR_04940 PF02378 Phosphotransferase system, EIIC AHTJR_04940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AHTJR_04945 PF00294 pfkB family carbohydrate kinase AHTJR_04950 PF00391 PEP-utilising enzyme, mobile domain AHTJR_04950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AHTJR_04950 PF00381 PTS HPr component phosphorylation site AHTJR_04950 PF05524 PEP-utilising enzyme, N-terminal AHTJR_04950 PF02896 PEP-utilising enzyme, TIM barrel domain AHTJR_04955 PF00378 Enoyl-CoA hydratase/isomerase AHTJR_04960 PF01467 Cytidylyltransferase-like AHTJR_04960 PF00293 NUDIX domain AHTJR_04965 PF03466 LysR substrate binding domain AHTJR_04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_04970 PF01361 Tautomerase enzyme AHTJR_04990 PF00578 AhpC/TSA family AHTJR_05005 PF06508 Queuosine biosynthesis protein QueC AHTJR_05010 PF04055 Radical SAM superfamily AHTJR_05015 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AHTJR_05015 PF14602 Hexapeptide repeat of succinyl-transferase AHTJR_05015 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_05025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_05025 PF03466 LysR substrate binding domain AHTJR_05030 PF12857 TOBE-like domain AHTJR_05030 PF00005 ABC transporter AHTJR_05035 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_05040 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_05055 PF01063 Amino-transferase class IV AHTJR_05060 PF02618 YceG-like family AHTJR_05065 PF02223 Thymidylate kinase AHTJR_05095 PF00890 FAD binding domain AHTJR_05095 PF02910 Fumarate reductase flavoprotein C-term AHTJR_05110 PF00679 Elongation factor G C-terminus AHTJR_05110 PF06421 GTP-binding protein LepA C-terminus AHTJR_05110 PF03144 Elongation factor Tu domain 2 AHTJR_05110 PF00009 Elongation factor Tu GTP binding domain AHTJR_05115 PF10502 Signal peptidase, peptidase S26 AHTJR_05125 PF00035 Double-stranded RNA binding motif AHTJR_05125 PF14622 Ribonuclease-III-like AHTJR_05130 PF01926 50S ribosome-binding GTPase AHTJR_05130 PF07650 KH domain AHTJR_05140 PF02565 Recombination protein O C terminal AHTJR_05140 PF11967 Recombination protein O N terminal AHTJR_05145 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AHTJR_05150 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AHTJR_05185 PF05922 Peptidase inhibitor I9 AHTJR_05185 PF00082 Subtilase family AHTJR_05190 PF04851 Type III restriction enzyme, res subunit AHTJR_05190 PF12344 Ultra-violet resistance protein B AHTJR_05190 PF00271 Helicase conserved C-terminal domain AHTJR_05190 PF17757 UvrB interaction domain AHTJR_05190 PF02151 UvrB/uvrC motif AHTJR_05205 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AHTJR_05205 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AHTJR_05220 PF01018 GTP1/OBG AHTJR_05220 PF01926 50S ribosome-binding GTPase AHTJR_05225 PF00696 Amino acid kinase family AHTJR_05225 PF01472 PUA domain AHTJR_05230 PF00589 Phage integrase family AHTJR_05305 PF00005 ABC transporter AHTJR_05305 PF08402 TOBE domain AHTJR_05315 PF07759 Protein of unknown function (DUF1615) AHTJR_05320 PF01207 Dihydrouridine synthase (Dus) AHTJR_05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_05325 PF03466 LysR substrate binding domain AHTJR_05330 PF12697 Alpha/beta hydrolase family AHTJR_05335 PF18113 Rubredoxin binding C-terminal domain AHTJR_05335 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_05340 PF00301 Rubredoxin AHTJR_05350 PF01336 OB-fold nucleic acid binding domain AHTJR_05350 PF00152 tRNA synthetases class II (D, K and N) AHTJR_05355 PF14052 Capsule assembly protein Wzi AHTJR_05360 PF01507 Phosphoadenosine phosphosulfate reductase family AHTJR_05365 PF00009 Elongation factor Tu GTP binding domain AHTJR_05375 PF16320 Ribosomal protein L7/L12 dimerisation domain AHTJR_05375 PF00542 Ribosomal protein L7/L12 C-terminal domain AHTJR_05380 PF00571 CBS domain AHTJR_05380 PF01595 Cyclin M transmembrane N-terminal domain AHTJR_05380 PF03471 Transporter associated domain AHTJR_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_05385 PF03466 LysR substrate binding domain AHTJR_05390 PF00463 Isocitrate lyase family AHTJR_05395 PF17185 NlpE C-terminal OB domain AHTJR_05395 PF04170 NlpE N-terminal domain AHTJR_05405 PF01406 tRNA synthetases class I (C) catalytic domain AHTJR_05405 PF09190 DALR domain AHTJR_05410 PF01380 SIS domain AHTJR_05410 PF00571 CBS domain AHTJR_05425 PF03968 OstA-like protein AHTJR_05430 PF12399 Branched-chain amino acid ATP-binding cassette transporter AHTJR_05430 PF00005 ABC transporter AHTJR_05440 PF00664 ABC transporter transmembrane region AHTJR_05440 PF00005 ABC transporter AHTJR_05440 PF03412 Peptidase C39 family AHTJR_05455 PF01205 Uncharacterized protein family UPF0029 AHTJR_05460 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_05470 PF01596 O-methyltransferase AHTJR_05480 PF00037 4Fe-4S binding domain AHTJR_05480 PF11953 Domain of unknown function (DUF3470) AHTJR_05490 PF00488 MutS domain V AHTJR_05490 PF05192 MutS domain III AHTJR_05490 PF05188 MutS domain II AHTJR_05490 PF01624 MutS domain I AHTJR_05490 PF05190 MutS family domain IV AHTJR_05550 PF13737 Transposase DDE domain AHTJR_05570 PF00717 Peptidase S24-like AHTJR_05580 PF12706 Beta-lactamase superfamily domain AHTJR_05590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AHTJR_05590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AHTJR_05595 PF01553 Acyltransferase AHTJR_05600 PF01435 Peptidase family M48 AHTJR_05620 PF09424 Yqey-like protein AHTJR_05625 PF01165 Ribosomal protein S21 AHTJR_05630 PF00814 Glycoprotease family AHTJR_05645 PF14864 Alkyl sulfatase C-terminal AHTJR_05645 PF00753 Metallo-beta-lactamase superfamily AHTJR_05645 PF14863 Alkyl sulfatase dimerisation AHTJR_05650 PF13737 Transposase DDE domain AHTJR_05660 PF00892 EamA-like transporter family AHTJR_05685 PF00069 Protein kinase domain AHTJR_05685 PF03793 PASTA domain AHTJR_05710 PF09339 IclR helix-turn-helix domain AHTJR_05710 PF01614 Bacterial transcriptional regulator AHTJR_05715 PF00355 Rieske [2Fe-2S] domain AHTJR_05725 PF00355 Rieske [2Fe-2S] domain AHTJR_05735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AHTJR_05740 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_05740 PF14759 Reductase C-terminal AHTJR_05745 PF07690 Major Facilitator Superfamily AHTJR_05755 PF12697 Alpha/beta hydrolase family AHTJR_05765 PF01958 Domain of unknown function DUF108 AHTJR_05765 PF03447 Homoserine dehydrogenase, NAD binding domain AHTJR_05770 PF00171 Aldehyde dehydrogenase family AHTJR_05775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AHTJR_05775 PF00205 Thiamine pyrophosphate enzyme, central domain AHTJR_05775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AHTJR_05785 PF00206 Lyase AHTJR_05785 PF08328 Adenylosuccinate lyase C-terminal AHTJR_05790 PF04356 Protein of unknown function (DUF489) AHTJR_05800 PF00293 NUDIX domain AHTJR_05805 PF10946 Protein of unknown function DUF2625 AHTJR_05810 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_05815 PF07943 Penicillin-binding protein 5, C-terminal domain AHTJR_05815 PF00768 D-alanyl-D-alanine carboxypeptidase AHTJR_05835 PF01975 Survival protein SurE AHTJR_05840 PF01551 Peptidase family M23 AHTJR_05840 PF01476 LysM domain AHTJR_05845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_05845 PF03466 LysR substrate binding domain AHTJR_05850 PF13654 AAA domain AHTJR_05850 PF05362 Lon protease (S16) C-terminal proteolytic domain AHTJR_05855 PF07690 Major Facilitator Superfamily AHTJR_05860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AHTJR_05865 PF13593 SBF-like CPA transporter family (DUF4137) AHTJR_05870 PF01197 Ribosomal protein L31 AHTJR_05885 PF04055 Radical SAM superfamily AHTJR_05890 PF09285 Elongation factor P, C-terminal AHTJR_05890 PF01132 Elongation factor P (EF-P) OB domain AHTJR_05890 PF08207 Elongation factor P (EF-P) KOW-like domain AHTJR_05895 PF02554 Carbon starvation protein CstA AHTJR_05895 PF13722 5TM C-terminal transporter carbon starvation CstA AHTJR_05900 PF04328 Selenoprotein, putative AHTJR_05905 PF17863 AAA lid domain AHTJR_05905 PF07726 ATPase family associated with various cellular activities (AAA) AHTJR_05915 PF11992 Domain of unknown function (DUF3488) AHTJR_05915 PF13559 Domain of unknown function (DUF4129) AHTJR_05915 PF01841 Transglutaminase-like superfamily AHTJR_05965 PF17954 Quercetinase C-terminal cupin domain AHTJR_05965 PF02678 Pirin AHTJR_05970 PF00764 Arginosuccinate synthase AHTJR_05980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AHTJR_05980 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_06000 PF13737 Transposase DDE domain AHTJR_06020 PF02601 Exonuclease VII, large subunit AHTJR_06020 PF13742 OB-fold nucleic acid binding domain AHTJR_06025 PF13737 Transposase DDE domain AHTJR_06030 PF01867 CRISPR associated protein Cas1 AHTJR_06040 PF09615 CRISPR-associated protein (Cas_Csy3) AHTJR_06060 PF18019 HD domain AHTJR_06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_06065 PF03466 LysR substrate binding domain AHTJR_06070 PF07883 Cupin domain AHTJR_06075 PF13417 Glutathione S-transferase, N-terminal domain AHTJR_06080 PF01557 Fumarylacetoacetate (FAA) hydrolase family AHTJR_06085 PF07690 Major Facilitator Superfamily AHTJR_06100 PF08521 Two-component sensor kinase N-terminal AHTJR_06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_06100 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_06105 PF00072 Response regulator receiver domain AHTJR_06105 PF00486 Transcriptional regulatory protein, C terminal AHTJR_06110 PF11412 Disulphide bond corrector protein DsbC AHTJR_06110 PF02683 Cytochrome C biogenesis protein transmembrane region AHTJR_06115 PF08534 Redoxin AHTJR_06120 PF13185 GAF domain AHTJR_06120 PF02954 Bacterial regulatory protein, Fis family AHTJR_06120 PF00158 Sigma-54 interaction domain AHTJR_06125 PF00753 Metallo-beta-lactamase superfamily AHTJR_06135 PF01925 Sulfite exporter TauE/SafE AHTJR_06145 PF07715 TonB-dependent Receptor Plug Domain AHTJR_06145 PF00593 TonB dependent receptor AHTJR_06150 PF04717 Type VI secretion system, phage-baseplate injector AHTJR_06155 PF03527 RHS protein AHTJR_06155 PF05593 RHS Repeat AHTJR_06190 PF13737 Transposase DDE domain AHTJR_06200 PF01979 Amidohydrolase family AHTJR_06210 PF01502 Phosphoribosyl-AMP cyclohydrolase AHTJR_06215 PF02649 Type I GTP cyclohydrolase folE2 AHTJR_06230 PF07683 Cobalamin synthesis protein cobW C-terminal domain AHTJR_06230 PF02492 CobW/HypB/UreG, nucleotide-binding domain AHTJR_06235 PF01614 Bacterial transcriptional regulator AHTJR_06235 PF09339 IclR helix-turn-helix domain AHTJR_06240 PF01144 Coenzyme A transferase AHTJR_06245 PF01144 Coenzyme A transferase AHTJR_06250 PF00108 Thiolase, N-terminal domain AHTJR_06250 PF02803 Thiolase, C-terminal domain AHTJR_06255 PF10397 Adenylosuccinate lyase C-terminus AHTJR_06255 PF00206 Lyase AHTJR_06260 PF00561 alpha/beta hydrolase fold AHTJR_06265 PF07690 Major Facilitator Superfamily AHTJR_06275 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AHTJR_06275 PF00775 Dioxygenase AHTJR_06280 PF00775 Dioxygenase AHTJR_06285 PF01487 Type I 3-dehydroquinase AHTJR_06290 PF05048 Periplasmic copper-binding protein (NosD) AHTJR_06295 PF04966 Carbohydrate-selective porin, OprB family AHTJR_06300 PF13360 PQQ-like domain AHTJR_06300 PF01011 PQQ enzyme repeat AHTJR_06310 PF00576 HIUase/Transthyretin family AHTJR_06315 PF00860 Permease family AHTJR_06325 PF01494 FAD binding domain AHTJR_06330 PF07729 FCD domain AHTJR_06330 PF00392 Bacterial regulatory proteins, gntR family AHTJR_06335 PF03561 Allantoicase repeat AHTJR_06340 PF04115 Ureidoglycolate lyase AHTJR_06345 PF13737 Transposase DDE domain AHTJR_06355 PF00005 ABC transporter AHTJR_06360 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_06365 PF01979 Amidohydrolase family AHTJR_06375 PF03466 LysR substrate binding domain AHTJR_06375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_06380 PF00355 Rieske [2Fe-2S] domain AHTJR_06385 PF07702 UTRA domain AHTJR_06385 PF00392 Bacterial regulatory proteins, gntR family AHTJR_06395 PF00221 Aromatic amino acid lyase AHTJR_06400 PF01979 Amidohydrolase family AHTJR_06405 PF00491 Arginase family AHTJR_06410 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AHTJR_06410 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AHTJR_06415 PF00155 Aminotransferase class I and II AHTJR_06415 PF00392 Bacterial regulatory proteins, gntR family AHTJR_06425 PF00384 Molybdopterin oxidoreductase AHTJR_06430 PF02634 FdhD/NarQ family AHTJR_06435 PF04261 Dyp-type peroxidase family AHTJR_06445 PF02321 Outer membrane efflux protein AHTJR_06450 PF00873 AcrB/AcrD/AcrF family AHTJR_06455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHTJR_06455 PF00529 HlyD membrane-fusion protein of T1SS AHTJR_06460 PF00486 Transcriptional regulatory protein, C terminal AHTJR_06460 PF00072 Response regulator receiver domain AHTJR_06465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_06465 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_06465 PF00672 HAMP domain AHTJR_06470 PF08212 Lipocalin-like domain AHTJR_06505 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_06505 PF08521 Two-component sensor kinase N-terminal AHTJR_06505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_06510 PF00486 Transcriptional regulatory protein, C terminal AHTJR_06510 PF00072 Response regulator receiver domain AHTJR_06525 PF00440 Bacterial regulatory proteins, tetR family AHTJR_06525 PF17932 Tetracyclin repressor-like, C-terminal domain AHTJR_06540 PF00106 short chain dehydrogenase AHTJR_06545 PF00743 Flavin-binding monooxygenase-like AHTJR_06550 PF04072 Leucine carboxyl methyltransferase AHTJR_06555 PF03279 Bacterial lipid A biosynthesis acyltransferase AHTJR_06560 PF03746 LamB/YcsF family AHTJR_06570 PF00289 Biotin carboxylase, N-terminal domain AHTJR_06570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AHTJR_06570 PF02785 Biotin carboxylase C-terminal domain AHTJR_06570 PF00364 Biotin-requiring enzyme AHTJR_06575 PF01435 Peptidase family M48 AHTJR_06580 PF00027 Cyclic nucleotide-binding domain AHTJR_06580 PF13545 Crp-like helix-turn-helix domain AHTJR_06585 PF02566 OsmC-like protein AHTJR_06595 PF10431 C-terminal, D2-small domain, of ClpB protein AHTJR_06595 PF07724 AAA domain (Cdc48 subfamily) AHTJR_06595 PF02861 Clp amino terminal domain, pathogenicity island component AHTJR_06595 PF00004 ATPase family associated with various cellular activities (AAA) AHTJR_06595 PF17871 AAA lid domain AHTJR_06605 PF02926 THUMP domain AHTJR_06605 PF01170 Putative RNA methylase family UPF0020 AHTJR_06605 PF10672 S-adenosylmethionine-dependent methyltransferase AHTJR_06615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AHTJR_06615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AHTJR_06620 PF01979 Amidohydrolase family AHTJR_06640 PF02110 Hydroxyethylthiazole kinase family AHTJR_06665 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AHTJR_06665 PF11940 Domain of unknown function (DUF3458) Ig-like fold AHTJR_06665 PF01433 Peptidase family M1 domain AHTJR_06670 PF03313 Serine dehydratase alpha chain AHTJR_06670 PF03315 Serine dehydratase beta chain AHTJR_06690 PF06271 RDD family AHTJR_06695 PF02308 MgtC family AHTJR_06700 PF00999 Sodium/hydrogen exchanger family AHTJR_06700 PF02254 TrkA-N domain AHTJR_06705 PF03594 Benzoate membrane transport protein AHTJR_06710 PF01810 LysE type translocator AHTJR_06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_06720 PF03466 LysR substrate binding domain AHTJR_06735 PF00270 DEAD/DEAH box helicase AHTJR_06735 PF02559 CarD-like/TRCF domain AHTJR_06735 PF03461 TRCF domain AHTJR_06735 PF17757 UvrB interaction domain AHTJR_06735 PF00271 Helicase conserved C-terminal domain AHTJR_06745 PF00211 Adenylate and Guanylate cyclase catalytic domain AHTJR_06750 PF00111 2Fe-2S iron-sulfur cluster binding domain AHTJR_06755 PF00012 Hsp70 protein AHTJR_06760 PF07743 HSCB C-terminal oligomerisation domain AHTJR_06760 PF00226 DnaJ domain AHTJR_06765 PF01521 Iron-sulphur cluster biosynthesis AHTJR_06770 PF01592 NifU-like N terminal domain AHTJR_06775 PF00266 Aminotransferase class-V AHTJR_06780 PF02082 Transcriptional regulator AHTJR_06795 PF00216 Bacterial DNA-binding protein AHTJR_06815 PF02631 RecX family AHTJR_06820 PF00154 recA bacterial DNA recombination protein AHTJR_06825 PF01479 S4 domain AHTJR_06830 PF13419 Haloacid dehalogenase-like hydrolase AHTJR_06835 PF00459 Inositol monophosphatase family AHTJR_06845 PF00041 Fibronectin type III domain AHTJR_06845 PF12561 ToxR activated gene A lipoprotein domain AHTJR_06855 PF01649 Ribosomal protein S20 AHTJR_06860 PF13460 NAD(P)H-binding AHTJR_06865 PF03737 Aldolase/RraA AHTJR_06875 PF13936 Helix-turn-helix domain AHTJR_06875 PF00665 Integrase core domain AHTJR_06890 PF00108 Thiolase, N-terminal domain AHTJR_06890 PF02803 Thiolase, C-terminal domain AHTJR_06930 PF07690 Major Facilitator Superfamily AHTJR_06935 PF02525 Flavodoxin-like fold AHTJR_06940 PF03466 LysR substrate binding domain AHTJR_06940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_06945 PF02545 Maf-like protein AHTJR_06955 PF00162 Phosphoglycerate kinase AHTJR_06975 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AHTJR_06975 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AHTJR_06995 PF01180 Dihydroorotate dehydrogenase AHTJR_07000 PF02674 Colicin V production protein AHTJR_07005 PF00156 Phosphoribosyl transferase domain AHTJR_07035 PF05816 Toxic anion resistance protein (TelA) AHTJR_07045 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_07045 PF13192 Thioredoxin domain AHTJR_07060 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_07065 PF00588 SpoU rRNA Methylase family AHTJR_07070 PF07733 Bacterial DNA polymerase III alpha NTPase domain AHTJR_07070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AHTJR_07070 PF14579 Helix-hairpin-helix motif AHTJR_07070 PF02811 PHP domain AHTJR_07070 PF01336 OB-fold nucleic acid binding domain AHTJR_07075 PF00710 Asparaginase, N-terminal AHTJR_07075 PF17763 Glutaminase/Asparaginase C-terminal domain AHTJR_07080 PF00155 Aminotransferase class I and II AHTJR_07085 PF01641 SelR domain AHTJR_07090 PF00255 Glutathione peroxidase AHTJR_07095 PF00873 AcrB/AcrD/AcrF family AHTJR_07100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHTJR_07115 PF01037 Lrp/AsnC ligand binding domain AHTJR_07125 PF00155 Aminotransferase class I and II AHTJR_07130 PF08335 GlnD PII-uridylyltransferase AHTJR_07130 PF01966 HD domain AHTJR_07130 PF01909 Nucleotidyltransferase domain AHTJR_07135 PF02222 ATP-grasp domain AHTJR_07140 PF14552 Tautomerase enzyme AHTJR_07150 PF00571 CBS domain AHTJR_07150 PF01595 Cyclin M transmembrane N-terminal domain AHTJR_07155 PF00027 Cyclic nucleotide-binding domain AHTJR_07155 PF13545 Crp-like helix-turn-helix domain AHTJR_07165 PF01926 50S ribosome-binding GTPase AHTJR_07165 PF06071 Protein of unknown function (DUF933) AHTJR_07170 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_07175 PF09383 NIL domain AHTJR_07175 PF00005 ABC transporter AHTJR_07180 PF03180 NLPA lipoprotein AHTJR_07185 PF00296 Luciferase-like monooxygenase AHTJR_07195 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_07195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_07210 PF01546 Peptidase family M20/M25/M40 AHTJR_07210 PF07687 Peptidase dimerisation domain AHTJR_07220 PF07804 HipA-like C-terminal domain AHTJR_07235 PF03883 Peroxide stress protein YaaA AHTJR_07255 PF05690 Thiazole biosynthesis protein ThiG AHTJR_07265 PF04241 Protein of unknown function (DUF423) AHTJR_07270 PF00140 Sigma-70 factor, region 1.2 AHTJR_07270 PF04542 Sigma-70 region 2 AHTJR_07270 PF04545 Sigma-70, region 4 AHTJR_07280 PF00313 'Cold-shock' DNA-binding domain AHTJR_07285 PF00271 Helicase conserved C-terminal domain AHTJR_07285 PF00270 DEAD/DEAH box helicase AHTJR_07290 PF01116 Fructose-bisphosphate aldolase class-II AHTJR_07295 PF00639 PPIC-type PPIASE domain AHTJR_07295 PF09312 SurA N-terminal domain AHTJR_07300 PF04453 LPS transport system D AHTJR_07300 PF03968 OstA-like protein AHTJR_07305 PF01636 Phosphotransferase enzyme family AHTJR_07310 PF00483 Nucleotidyl transferase AHTJR_07315 PF02527 rRNA small subunit methyltransferase G AHTJR_07320 PF13614 AAA domain AHTJR_07325 PF02195 ParB-like nuclease domain AHTJR_07325 PF17762 HTH domain found in ParB protein AHTJR_07330 PF01618 MotA/TolQ/ExbB proton channel family AHTJR_07340 PF00664 ABC transporter transmembrane region AHTJR_07340 PF00005 ABC transporter AHTJR_07345 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AHTJR_07350 PF02348 Cytidylyltransferase AHTJR_07355 PF09115 DNA polymerase III, delta subunit, C terminal AHTJR_07370 PF01026 TatD related DNase AHTJR_07385 PF02501 Type II secretion system (T2SS), protein I AHTJR_07385 PF07963 Prokaryotic N-terminal methylation motif AHTJR_07390 PF11612 Type II secretion system (T2SS), protein J AHTJR_07390 PF07963 Prokaryotic N-terminal methylation motif AHTJR_07395 PF03934 Type II secretion system (T2SS), protein K AHTJR_07405 PF03167 Uracil DNA glycosylase superfamily AHTJR_07415 PF14437 MafB19-like deaminase AHTJR_07425 PF02224 Cytidylate kinase AHTJR_07430 PF00575 S1 RNA binding domain AHTJR_07435 PF00216 Bacterial DNA-binding protein AHTJR_07445 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AHTJR_07450 PF03956 Lysine exporter LysO AHTJR_07455 PF00743 Flavin-binding monooxygenase-like AHTJR_07465 PF03969 AFG1-like ATPase AHTJR_07470 PF01274 Malate synthase AHTJR_07515 PF05525 Branched-chain amino acid transport protein AHTJR_07520 PF00557 Metallopeptidase family M24 AHTJR_07525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_07525 PF03466 LysR substrate binding domain AHTJR_07535 PF00462 Glutaredoxin AHTJR_07540 PF00202 Aminotransferase class-III AHTJR_07545 PF01380 SIS domain AHTJR_07545 PF00571 CBS domain AHTJR_07570 PF02881 SRP54-type protein, helical bundle domain AHTJR_07570 PF00448 SRP54-type protein, GTPase domain AHTJR_07595 PF08173 Membrane bound YbgT-like protein AHTJR_07600 PF02322 Cytochrome bd terminal oxidase subunit II AHTJR_07605 PF01654 Cytochrome bd terminal oxidase subunit I AHTJR_07625 PF00294 pfkB family carbohydrate kinase AHTJR_07630 PF08367 Peptidase M16C associated AHTJR_07630 PF00675 Insulinase (Peptidase family M16) AHTJR_07630 PF05193 Peptidase M16 inactive domain AHTJR_07635 PF02253 Phospholipase A1 AHTJR_07645 PF02386 Cation transport protein AHTJR_07650 PF02254 TrkA-N domain AHTJR_07650 PF02080 TrkA-C domain AHTJR_07655 PF00585 C-terminal regulatory domain of Threonine dehydratase AHTJR_07655 PF00291 Pyridoxal-phosphate dependent enzyme AHTJR_07660 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AHTJR_07675 PF00245 Alkaline phosphatase AHTJR_07685 PF01118 Semialdehyde dehydrogenase, NAD binding domain AHTJR_07685 PF02774 Semialdehyde dehydrogenase, dimerisation domain AHTJR_07695 PF02617 ATP-dependent Clp protease adaptor protein ClpS AHTJR_07700 PF02617 ATP-dependent Clp protease adaptor protein ClpS AHTJR_07705 PF07724 AAA domain (Cdc48 subfamily) AHTJR_07705 PF10431 C-terminal, D2-small domain, of ClpB protein AHTJR_07705 PF02861 Clp amino terminal domain, pathogenicity island component AHTJR_07705 PF17871 AAA lid domain AHTJR_07705 PF00004 ATPase family associated with various cellular activities (AAA) AHTJR_07710 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AHTJR_07715 PF00793 DAHP synthetase I family AHTJR_07720 PF12697 Alpha/beta hydrolase family AHTJR_07730 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_07730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AHTJR_07755 PF06418 CTP synthase N-terminus AHTJR_07755 PF00117 Glutamine amidotransferase class-I AHTJR_07760 PF00793 DAHP synthetase I family AHTJR_07765 PF00113 Enolase, C-terminal TIM barrel domain AHTJR_07765 PF03952 Enolase, N-terminal domain AHTJR_07770 PF04977 Septum formation initiator AHTJR_07775 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AHTJR_07795 PF04143 Sulphur transport AHTJR_07805 PF00753 Metallo-beta-lactamase superfamily AHTJR_07830 PF13091 PLD-like domain AHTJR_07835 PF02583 Metal-sensitive transcriptional repressor AHTJR_07840 PF08240 Alcohol dehydrogenase GroES-like domain AHTJR_07840 PF00107 Zinc-binding dehydrogenase AHTJR_07845 PF01425 Amidase AHTJR_07850 PF02785 Biotin carboxylase C-terminal domain AHTJR_07850 PF00289 Biotin carboxylase, N-terminal domain AHTJR_07850 PF00364 Biotin-requiring enzyme AHTJR_07850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AHTJR_07855 PF07729 FCD domain AHTJR_07855 PF00392 Bacterial regulatory proteins, gntR family AHTJR_07865 PF12833 Helix-turn-helix domain AHTJR_07865 PF06719 AraC-type transcriptional regulator N-terminus AHTJR_07870 PF00107 Zinc-binding dehydrogenase AHTJR_07870 PF08240 Alcohol dehydrogenase GroES-like domain AHTJR_07875 PF01965 DJ-1/PfpI family AHTJR_07880 PF08546 Ketopantoate reductase PanE/ApbA C terminal AHTJR_07880 PF02558 Ketopantoate reductase PanE/ApbA AHTJR_07890 PF13533 Biotin-lipoyl like AHTJR_07895 PF13737 Transposase DDE domain AHTJR_07925 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AHTJR_07925 PF18381 YcaO cyclodehydratase C-terminal domain AHTJR_07935 PF00106 short chain dehydrogenase AHTJR_07945 PF01037 Lrp/AsnC ligand binding domain AHTJR_07960 PF02785 Biotin carboxylase C-terminal domain AHTJR_07960 PF00289 Biotin carboxylase, N-terminal domain AHTJR_07960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AHTJR_07965 PF01402 Ribbon-helix-helix protein, copG family AHTJR_07965 PF08753 NikR C terminal nickel binding domain AHTJR_07970 PF09084 NMT1/THI5 like AHTJR_07975 PF00005 ABC transporter AHTJR_07980 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_07985 PF04542 Sigma-70 region 2 AHTJR_07985 PF08281 Sigma-70, region 4 AHTJR_08015 PF01126 Heme oxygenase AHTJR_08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_08045 PF03466 LysR substrate binding domain AHTJR_08050 PF00682 HMGL-like AHTJR_08055 PF00289 Biotin carboxylase, N-terminal domain AHTJR_08055 PF00364 Biotin-requiring enzyme AHTJR_08055 PF02785 Biotin carboxylase C-terminal domain AHTJR_08055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AHTJR_08060 PF00378 Enoyl-CoA hydratase/isomerase AHTJR_08065 PF01039 Carboxyl transferase domain AHTJR_08070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_08070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_08070 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_08075 PF00440 Bacterial regulatory proteins, tetR family AHTJR_08080 PF13193 AMP-binding enzyme C-terminal domain AHTJR_08080 PF00501 AMP-binding enzyme AHTJR_08095 PF07690 Major Facilitator Superfamily AHTJR_08100 PF00108 Thiolase, N-terminal domain AHTJR_08100 PF02803 Thiolase, C-terminal domain AHTJR_08105 PF01144 Coenzyme A transferase AHTJR_08110 PF01144 Coenzyme A transferase AHTJR_08115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_08115 PF03466 LysR substrate binding domain AHTJR_08125 PF00593 TonB dependent receptor AHTJR_08125 PF07715 TonB-dependent Receptor Plug Domain AHTJR_08160 PF01557 Fumarylacetoacetate (FAA) hydrolase family AHTJR_08175 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AHTJR_08180 PF00561 alpha/beta hydrolase fold AHTJR_08190 PF01494 FAD binding domain AHTJR_08195 PF01557 Fumarylacetoacetate (FAA) hydrolase family AHTJR_08205 PF07836 DmpG-like communication domain AHTJR_08205 PF00682 HMGL-like AHTJR_08210 PF00106 short chain dehydrogenase AHTJR_08280 PF13737 Transposase DDE domain AHTJR_08290 PF02525 Flavodoxin-like fold AHTJR_08300 PF00990 Diguanylate cyclase, GGDEF domain AHTJR_08305 PF01264 Chorismate synthase AHTJR_08310 PF05175 Methyltransferase small domain AHTJR_08320 PF17862 AAA+ lid domain AHTJR_08320 PF01434 Peptidase family M41 AHTJR_08320 PF00004 ATPase family associated with various cellular activities (AAA) AHTJR_08330 PF05166 YcgL domain AHTJR_08335 PF01612 3'-5' exonuclease AHTJR_08335 PF00570 HRDC domain AHTJR_08340 PF02132 RecR protein AHTJR_08340 PF13662 Toprim domain AHTJR_08345 PF02575 YbaB/EbfC DNA-binding family AHTJR_08350 PF01053 Cys/Met metabolism PLP-dependent enzyme AHTJR_08360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AHTJR_08360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AHTJR_08390 PF01230 HIT domain AHTJR_08420 PF02684 Lipid-A-disaccharide synthetase AHTJR_08440 PF01925 Sulfite exporter TauE/SafE AHTJR_08445 PF00793 DAHP synthetase I family AHTJR_08455 PF07715 TonB-dependent Receptor Plug Domain AHTJR_08455 PF00593 TonB dependent receptor AHTJR_08465 PF02654 Cobalamin-5-phosphate synthase AHTJR_08475 PF00300 Histidine phosphatase superfamily (branch 1) AHTJR_08480 PF02277 Phosphoribosyltransferase AHTJR_08485 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AHTJR_08495 PF13419 Haloacid dehalogenase-like hydrolase AHTJR_08505 PF00593 TonB dependent receptor AHTJR_08505 PF07715 TonB-dependent Receptor Plug Domain AHTJR_08510 PF07690 Major Facilitator Superfamily AHTJR_08525 PF04183 IucA / IucC family AHTJR_08525 PF06276 Ferric iron reductase FhuF-like transporter AHTJR_08530 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AHTJR_08535 PF06276 Ferric iron reductase FhuF-like transporter AHTJR_08535 PF04183 IucA / IucC family AHTJR_08540 PF04073 Aminoacyl-tRNA editing domain AHTJR_08550 PF03109 ABC1 family AHTJR_08555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_08555 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_08555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_08560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_08560 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_08560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_08565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_08565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AHTJR_08570 PF00487 Fatty acid desaturase AHTJR_08575 PF12852 Cupin AHTJR_08575 PF12833 Helix-turn-helix domain AHTJR_08580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AHTJR_08580 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_08585 PF07977 FabA-like domain AHTJR_08590 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AHTJR_08590 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_08600 PF01103 Surface antigen AHTJR_08600 PF07244 Surface antigen variable number repeat AHTJR_08605 PF17820 PDZ domain AHTJR_08605 PF02163 Peptidase family M50 AHTJR_08605 PF13180 PDZ domain AHTJR_08610 PF13288 DXP reductoisomerase C-terminal domain AHTJR_08610 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AHTJR_08610 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AHTJR_08620 PF01255 Putative undecaprenyl diphosphate synthase AHTJR_08625 PF01765 Ribosome recycling factor AHTJR_08630 PF00696 Amino acid kinase family AHTJR_08635 PF18693 TRAM domain AHTJR_08635 PF00919 Uncharacterized protein family UPF0004 AHTJR_08635 PF04055 Radical SAM superfamily AHTJR_08640 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_08640 PF00989 PAS fold AHTJR_08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_08645 PF02954 Bacterial regulatory protein, Fis family AHTJR_08645 PF00158 Sigma-54 interaction domain AHTJR_08645 PF00072 Response regulator receiver domain AHTJR_08650 PF00440 Bacterial regulatory proteins, tetR family AHTJR_08655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AHTJR_08655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AHTJR_08665 PF02542 YgbB family AHTJR_08675 PF01266 FAD dependent oxidoreductase AHTJR_08685 PF00206 Lyase AHTJR_08685 PF10415 Fumarase C C-terminus AHTJR_08690 PF16363 GDP-mannose 4,6 dehydratase AHTJR_08695 PF02635 DsrE/DsrF-like family AHTJR_08715 PF00892 EamA-like transporter family AHTJR_08720 PF00392 Bacterial regulatory proteins, gntR family AHTJR_08720 PF00155 Aminotransferase class I and II AHTJR_08725 PF01638 HxlR-like helix-turn-helix AHTJR_08730 PF03453 MoeA N-terminal region (domain I and II) AHTJR_08730 PF03454 MoeA C-terminal region (domain IV) AHTJR_08730 PF00994 Probable molybdopterin binding domain AHTJR_08735 PF00994 Probable molybdopterin binding domain AHTJR_08735 PF01967 MoaC family AHTJR_08740 PF02391 MoaE protein AHTJR_08750 PF04055 Radical SAM superfamily AHTJR_08750 PF06463 Molybdenum Cofactor Synthesis C AHTJR_08755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHTJR_08755 PF00384 Molybdopterin oxidoreductase AHTJR_08755 PF01568 Molydopterin dinucleotide binding domain AHTJR_08760 PF00291 Pyridoxal-phosphate dependent enzyme AHTJR_08765 PF12804 MobA-like NTP transferase domain AHTJR_08770 PF04324 BFD-like [2Fe-2S] binding domain AHTJR_08770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHTJR_08770 PF00384 Molybdopterin oxidoreductase AHTJR_08770 PF01568 Molydopterin dinucleotide binding domain AHTJR_08775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AHTJR_08775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AHTJR_08775 PF04324 BFD-like [2Fe-2S] binding domain AHTJR_08775 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_08775 PF18267 Rubredoxin NAD+ reductase C-terminal domain AHTJR_08780 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_08780 PF04324 BFD-like [2Fe-2S] binding domain AHTJR_08780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AHTJR_08780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AHTJR_08780 PF13806 Rieske-like [2Fe-2S] domain AHTJR_08780 PF18267 Rubredoxin NAD+ reductase C-terminal domain AHTJR_08785 PF07690 Major Facilitator Superfamily AHTJR_08795 PF00005 ABC transporter AHTJR_08800 PF01220 Dehydroquinase class II AHTJR_08805 PF00364 Biotin-requiring enzyme AHTJR_08810 PF02785 Biotin carboxylase C-terminal domain AHTJR_08810 PF00289 Biotin carboxylase, N-terminal domain AHTJR_08810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AHTJR_08820 PF01425 Amidase AHTJR_08825 PF07690 Major Facilitator Superfamily AHTJR_08825 PF00083 Sugar (and other) transporter AHTJR_08835 PF01645 Conserved region in glutamate synthase AHTJR_08850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AHTJR_08850 PF01565 FAD binding domain AHTJR_08855 PF01451 Low molecular weight phosphotyrosine protein phosphatase AHTJR_08870 PF13737 Transposase DDE domain AHTJR_08875 PF13737 Transposase DDE domain AHTJR_08880 PF01292 Prokaryotic cytochrome b561 AHTJR_08885 PF00465 Iron-containing alcohol dehydrogenase AHTJR_08890 PF03061 Thioesterase superfamily AHTJR_08895 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AHTJR_08895 PF12170 DNA polymerase III tau subunit V interacting with alpha AHTJR_08895 PF12169 DNA polymerase III subunits gamma and tau domain III AHTJR_08900 PF08007 Cupin superfamily protein AHTJR_08925 PF01740 STAS domain AHTJR_08925 PF00916 Sulfate permease family AHTJR_08930 PF00375 Sodium:dicarboxylate symporter family AHTJR_08945 PF00924 Mechanosensitive ion channel AHTJR_08955 PF00664 ABC transporter transmembrane region AHTJR_08955 PF00005 ABC transporter AHTJR_08965 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AHTJR_08965 PF12833 Helix-turn-helix domain AHTJR_08970 PF01597 Glycine cleavage H-protein AHTJR_08975 PF00474 Sodium:solute symporter family AHTJR_08980 PF01037 Lrp/AsnC ligand binding domain AHTJR_08985 PF14850 DNA-binding domain of Proline dehydrogenase AHTJR_08985 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AHTJR_08985 PF01619 Proline dehydrogenase AHTJR_08985 PF00171 Aldehyde dehydrogenase family AHTJR_08990 PF04229 GrpB protein AHTJR_08995 PF05958 tRNA (Uracil-5-)-methyltransferase AHTJR_09005 PF09992 Phosphodiester glycosidase AHTJR_09015 PF09857 Putative toxin of bacterial toxin-antitoxin pair AHTJR_09020 PF13508 Acetyltransferase (GNAT) domain AHTJR_09025 PF04264 YceI-like domain AHTJR_09040 PF02780 Transketolase, C-terminal domain AHTJR_09040 PF00456 Transketolase, thiamine diphosphate binding domain AHTJR_09040 PF02779 Transketolase, pyrimidine binding domain AHTJR_09045 PF02773 S-adenosylmethionine synthetase, C-terminal domain AHTJR_09045 PF02772 S-adenosylmethionine synthetase, central domain AHTJR_09045 PF00438 S-adenosylmethionine synthetase, N-terminal domain AHTJR_09060 PF03891 Domain of unknown function (DUF333) AHTJR_09070 PF00313 'Cold-shock' DNA-binding domain AHTJR_09075 PF00313 'Cold-shock' DNA-binding domain AHTJR_09090 PF02075 Crossover junction endodeoxyribonuclease RuvC AHTJR_09095 PF03853 YjeF-related protein N-terminus AHTJR_09095 PF01256 Carbohydrate kinase AHTJR_09100 PF08331 Domain of unknown function (DUF1730) AHTJR_09105 PF06968 Biotin and Thiamin Synthesis associated domain AHTJR_09105 PF04055 Radical SAM superfamily AHTJR_09120 PF16970 Type-1 fimbrial protein, A AHTJR_09125 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AHTJR_09125 PF02753 Pili assembly chaperone PapD, C-terminal domain AHTJR_09130 PF13954 PapC N-terminal domain AHTJR_09130 PF13953 PapC C-terminal domain AHTJR_09130 PF00577 Outer membrane usher protein AHTJR_09135 PF00419 Fimbrial protein AHTJR_09165 PF01709 Transcriptional regulator AHTJR_09175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AHTJR_09180 PF01842 ACT domain AHTJR_09180 PF00800 Prephenate dehydratase AHTJR_09180 PF01817 Chorismate mutase type II AHTJR_09195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_09195 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_09195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_09200 PF00591 Glycosyl transferase family, a/b domain AHTJR_09200 PF02885 Glycosyl transferase family, helical bundle domain AHTJR_09230 PF04717 Type VI secretion system, phage-baseplate injector AHTJR_09235 PF07023 Protein of unknown function (DUF1315) AHTJR_09240 PF01513 ATP-NAD kinase AHTJR_09255 PF00293 NUDIX domain AHTJR_09265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_09265 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_09265 PF08521 Two-component sensor kinase N-terminal AHTJR_09270 PF00486 Transcriptional regulatory protein, C terminal AHTJR_09270 PF00072 Response regulator receiver domain AHTJR_09280 PF00437 Type II/IV secretion system protein AHTJR_09285 PF18389 TrmO C-terminal domain AHTJR_09285 PF01980 tRNA-methyltransferase O AHTJR_09290 PF00175 Oxidoreductase NAD-binding domain AHTJR_09290 PF00970 Oxidoreductase FAD-binding domain AHTJR_09315 PF04284 Protein of unknown function (DUF441) AHTJR_09320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_09320 PF03466 LysR substrate binding domain AHTJR_09325 PF02677 Epoxyqueuosine reductase QueH AHTJR_09335 PF07690 Major Facilitator Superfamily AHTJR_09340 PF01497 Periplasmic binding protein AHTJR_09345 PF00005 ABC transporter AHTJR_09350 PF01032 FecCD transport family AHTJR_09355 PF01032 FecCD transport family AHTJR_09365 PF00027 Cyclic nucleotide-binding domain AHTJR_09365 PF00520 Ion transport protein AHTJR_09370 PF00939 Sodium:sulfate symporter transmembrane region AHTJR_09380 PF00330 Aconitase family (aconitate hydratase) AHTJR_09380 PF11791 Aconitate B N-terminal domain AHTJR_09380 PF06434 Aconitate hydratase 2 N-terminus AHTJR_09395 PF07244 Surface antigen variable number repeat AHTJR_09395 PF01103 Surface antigen AHTJR_09395 PF17243 POTRA domain TamA domain 1 AHTJR_09400 PF07690 Major Facilitator Superfamily AHTJR_09405 PF03232 Ubiquinone biosynthesis protein COQ7 AHTJR_09420 PF02152 Dihydroneopterin aldolase AHTJR_09425 PF03109 ABC1 family AHTJR_09430 PF00899 ThiF family AHTJR_09440 PF03280 Proteobacterial lipase chaperone protein AHTJR_09445 PF00561 alpha/beta hydrolase fold AHTJR_09450 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AHTJR_09450 PF12833 Helix-turn-helix domain AHTJR_09455 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AHTJR_09455 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AHTJR_09460 PF00106 short chain dehydrogenase AHTJR_09465 PF02311 AraC-like ligand binding domain AHTJR_09465 PF12833 Helix-turn-helix domain AHTJR_09475 PF17827 PrmC N-terminal domain AHTJR_09475 PF13847 Methyltransferase domain AHTJR_09480 PF00472 RF-1 domain AHTJR_09480 PF03462 PCRF domain AHTJR_09490 PF00464 Serine hydroxymethyltransferase AHTJR_09550 PF00005 ABC transporter AHTJR_09555 PF01061 ABC-2 type transporter AHTJR_09560 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AHTJR_09560 PF14489 QueF-like protein AHTJR_09570 PF01098 Cell cycle protein AHTJR_09575 PF13406 Transglycosylase SLT domain AHTJR_09580 PF03330 Lytic transglycolase AHTJR_09580 PF05036 Sporulation related domain AHTJR_09595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AHTJR_09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_09600 PF04055 Radical SAM superfamily AHTJR_09610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AHTJR_09610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AHTJR_09615 PF04408 Helicase associated domain (HA2) AHTJR_09615 PF11898 Domain of unknown function (DUF3418) AHTJR_09615 PF00270 DEAD/DEAH box helicase AHTJR_09615 PF00271 Helicase conserved C-terminal domain AHTJR_09615 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AHTJR_09620 PF10417 C-terminal domain of 1-Cys peroxiredoxin AHTJR_09620 PF00578 AhpC/TSA family AHTJR_09630 PF00487 Fatty acid desaturase AHTJR_09640 PF01596 O-methyltransferase AHTJR_09650 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_09650 PF13192 Thioredoxin domain AHTJR_09660 PF00043 Glutathione S-transferase, C-terminal domain AHTJR_09660 PF02798 Glutathione S-transferase, N-terminal domain AHTJR_09670 PF02390 Putative methyltransferase AHTJR_09685 PF14493 Helix-turn-helix domain AHTJR_09685 PF05970 PIF1-like helicase AHTJR_09695 PF02540 NAD synthase AHTJR_09695 PF00958 GMP synthase C terminal domain AHTJR_09695 PF00117 Glutamine amidotransferase class-I AHTJR_09700 PF00749 tRNA synthetases class I (E and Q), catalytic domain AHTJR_09700 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AHTJR_09705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AHTJR_09710 PF00149 Calcineurin-like phosphoesterase AHTJR_09715 PF00881 Nitroreductase family AHTJR_09720 PF02525 Flavodoxin-like fold AHTJR_09735 PF17209 Hfq protein AHTJR_09745 PF01119 DNA mismatch repair protein, C-terminal domain AHTJR_09745 PF08676 MutL C terminal dimerisation domain AHTJR_09750 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AHTJR_09755 PF01479 S4 domain AHTJR_09755 PF00849 RNA pseudouridylate synthase AHTJR_09765 PF00583 Acetyltransferase (GNAT) family AHTJR_09770 PF01479 S4 domain AHTJR_09770 PF00849 RNA pseudouridylate synthase AHTJR_09780 PF00296 Luciferase-like monooxygenase AHTJR_09785 PF00990 Diguanylate cyclase, GGDEF domain AHTJR_09785 PF03707 Bacterial signalling protein N terminal repeat AHTJR_09785 PF00563 EAL domain AHTJR_09790 PF03618 Kinase/pyrophosphorylase AHTJR_09795 PF02896 PEP-utilising enzyme, TIM barrel domain AHTJR_09795 PF00391 PEP-utilising enzyme, mobile domain AHTJR_09795 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AHTJR_09805 PF06481 COX Aromatic Rich Motif AHTJR_09805 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AHTJR_09810 PF00115 Cytochrome C and Quinol oxidase polypeptide I AHTJR_09815 PF00510 Cytochrome c oxidase subunit III AHTJR_09820 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AHTJR_09825 PF01040 UbiA prenyltransferase family AHTJR_09830 PF01250 Ribosomal protein S6 AHTJR_09835 PF01084 Ribosomal protein S18 AHTJR_09840 PF01281 Ribosomal protein L9, N-terminal domain AHTJR_09840 PF03948 Ribosomal protein L9, C-terminal domain AHTJR_09845 PF02525 Flavodoxin-like fold AHTJR_09850 PF01638 HxlR-like helix-turn-helix AHTJR_09855 PF00772 DnaB-like helicase N terminal domain AHTJR_09855 PF03796 DnaB-like helicase C terminal domain AHTJR_09860 PF00842 Alanine racemase, C-terminal domain AHTJR_09860 PF01168 Alanine racemase, N-terminal domain AHTJR_09875 PF08379 Bacterial transglutaminase-like N-terminal region AHTJR_09875 PF01841 Transglutaminase-like superfamily AHTJR_09885 PF14403 Circularly permuted ATP-grasp type 2 AHTJR_09895 PF00709 Adenylosuccinate synthetase AHTJR_09900 PF13393 Histidyl-tRNA synthetase AHTJR_09930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AHTJR_09930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AHTJR_09935 PF01411 tRNA synthetases class II (A) AHTJR_09935 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AHTJR_09935 PF02272 DHHA1 domain AHTJR_09940 PF00696 Amino acid kinase family AHTJR_09940 PF13840 ACT domain AHTJR_09940 PF01842 ACT domain AHTJR_09945 PF02599 Global regulator protein family AHTJR_09950 PF01351 Ribonuclease HII AHTJR_09960 PF01292 Prokaryotic cytochrome b561 AHTJR_09965 PF00962 Adenosine/AMP deaminase AHTJR_09970 PF00860 Permease family AHTJR_09980 PF00593 TonB dependent receptor AHTJR_09980 PF07715 TonB-dependent Receptor Plug Domain AHTJR_09990 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AHTJR_09990 PF12833 Helix-turn-helix domain AHTJR_10000 PF00893 Small Multidrug Resistance protein AHTJR_10005 PF01134 Glucose inhibited division protein A AHTJR_10005 PF13932 GidA associated domain AHTJR_10025 PF02954 Bacterial regulatory protein, Fis family AHTJR_10030 PF01808 AICARFT/IMPCHase bienzyme AHTJR_10030 PF02142 MGS-like domain AHTJR_10035 PF02843 Phosphoribosylglycinamide synthetase, C domain AHTJR_10035 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AHTJR_10035 PF02844 Phosphoribosylglycinamide synthetase, N domain AHTJR_10040 PF03180 NLPA lipoprotein AHTJR_10045 PF09383 NIL domain AHTJR_10045 PF00005 ABC transporter AHTJR_10050 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_10075 PF00753 Metallo-beta-lactamase superfamily AHTJR_10075 PF16123 Hydroxyacylglutathione hydrolase C-terminus AHTJR_10085 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AHTJR_10085 PF05221 S-adenosyl-L-homocysteine hydrolase AHTJR_10090 PF02219 Methylenetetrahydrofolate reductase AHTJR_10095 PF04452 RNA methyltransferase AHTJR_10100 PF00563 EAL domain AHTJR_10100 PF00990 Diguanylate cyclase, GGDEF domain AHTJR_10100 PF03707 Bacterial signalling protein N terminal repeat AHTJR_10105 PF00390 Malic enzyme, N-terminal domain AHTJR_10105 PF03949 Malic enzyme, NAD binding domain AHTJR_10105 PF01515 Phosphate acetyl/butaryl transferase AHTJR_10110 PF12627 Probable RNA and SrmB- binding site of polymerase A AHTJR_10110 PF01743 Poly A polymerase head domain AHTJR_10115 PF00889 Elongation factor TS AHTJR_10120 PF00318 Ribosomal protein S2 AHTJR_10125 PF00557 Metallopeptidase family M24 AHTJR_10135 PF07690 Major Facilitator Superfamily AHTJR_10145 PF13180 PDZ domain AHTJR_10150 PF01784 NIF3 (NGG1p interacting factor 3) AHTJR_10155 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AHTJR_10155 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AHTJR_10190 PF01040 UbiA prenyltransferase family AHTJR_10195 PF04345 Chorismate lyase AHTJR_10210 PF00117 Glutamine amidotransferase class-I AHTJR_10220 PF00111 2Fe-2S iron-sulfur cluster binding domain AHTJR_10220 PF03473 MOSC domain AHTJR_10220 PF03476 MOSC N-terminal beta barrel domain AHTJR_10225 PF00591 Glycosyl transferase family, a/b domain AHTJR_10225 PF02885 Glycosyl transferase family, helical bundle domain AHTJR_10230 PF00218 Indole-3-glycerol phosphate synthase AHTJR_10245 PF01227 GTP cyclohydrolase I AHTJR_10265 PF05675 Protein of unknown function (DUF817) AHTJR_10270 PF01208 Uroporphyrinogen decarboxylase (URO-D) AHTJR_10280 PF01590 GAF domain AHTJR_10280 PF00563 EAL domain AHTJR_10280 PF00360 Phytochrome region AHTJR_10280 PF00990 Diguanylate cyclase, GGDEF domain AHTJR_10285 PF01979 Amidohydrolase family AHTJR_10290 PF00929 Exonuclease AHTJR_10300 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_10300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AHTJR_10305 PF00005 ABC transporter AHTJR_10305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AHTJR_10310 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_10310 PF12911 N-terminal TM domain of oligopeptide transport permease C AHTJR_10315 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_10320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AHTJR_10325 PF01464 Transglycosylase SLT domain AHTJR_10325 PF01464 Transglycosylase SLT domain AHTJR_10325 PF01476 LysM domain AHTJR_10325 PF01476 LysM domain AHTJR_10330 PF00929 Exonuclease AHTJR_10340 PF09297 NADH pyrophosphatase zinc ribbon domain AHTJR_10340 PF00293 NUDIX domain AHTJR_10345 PF07859 alpha/beta hydrolase fold AHTJR_10350 PF04972 BON domain AHTJR_10355 PF02021 Uncharacterised protein family UPF0102 AHTJR_10365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AHTJR_10370 PF03466 LysR substrate binding domain AHTJR_10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_10375 PF01810 LysE type translocator AHTJR_10385 PF13411 MerR HTH family regulatory protein AHTJR_10395 PF01494 FAD binding domain AHTJR_10400 PF01494 FAD binding domain AHTJR_10405 PF05195 Aminopeptidase P, N-terminal domain AHTJR_10405 PF00557 Metallopeptidase family M24 AHTJR_10410 PF03695 Uncharacterised protein family (UPF0149) AHTJR_10440 PF13411 MerR HTH family regulatory protein AHTJR_10455 PF03895 YadA-like membrane anchor domain AHTJR_10455 PF05658 Head domain of trimeric autotransporter adhesin AHTJR_10455 PF13018 Extended Signal Peptide of Type V secretion system AHTJR_10455 PF05662 Coiled stalk of trimeric autotransporter adhesin AHTJR_10455 PF13018 Extended Signal Peptide of Type V secretion system AHTJR_10455 PF03895 YadA-like membrane anchor domain AHTJR_10455 PF05658 Head domain of trimeric autotransporter adhesin AHTJR_10455 PF05662 Coiled stalk of trimeric autotransporter adhesin AHTJR_10460 PF01812 5-formyltetrahydrofolate cyclo-ligase family AHTJR_10465 PF05362 Lon protease (S16) C-terminal proteolytic domain AHTJR_10465 PF00004 ATPase family associated with various cellular activities (AAA) AHTJR_10465 PF02190 ATP-dependent protease La (LON) substrate-binding domain AHTJR_10470 PF02590 Predicted SPOUT methyltransferase AHTJR_10475 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AHTJR_10485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AHTJR_10485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AHTJR_10515 PF04717 Type VI secretion system, phage-baseplate injector AHTJR_10520 PF04060 Putative Fe-S cluster AHTJR_10525 PF10576 Iron-sulfur binding domain of endonuclease III AHTJR_10525 PF00633 Helix-hairpin-helix motif AHTJR_10525 PF00730 HhH-GPD superfamily base excision DNA repair protein AHTJR_10535 PF05191 Adenylate kinase, active site lid AHTJR_10550 PF03717 Penicillin-binding Protein dimerisation domain AHTJR_10550 PF00905 Penicillin binding protein transpeptidase domain AHTJR_10580 PF01343 Peptidase family S49 AHTJR_10580 PF08496 Peptidase family S49 N-terminal AHTJR_10585 PF00005 ABC transporter AHTJR_10590 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_10595 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_10605 PF00355 Rieske [2Fe-2S] domain AHTJR_10610 PF00282 Pyridoxal-dependent decarboxylase conserved domain AHTJR_10615 PF00202 Aminotransferase class-III AHTJR_10625 PF00440 Bacterial regulatory proteins, tetR family AHTJR_10640 PF00111 2Fe-2S iron-sulfur cluster binding domain AHTJR_10640 PF00175 Oxidoreductase NAD-binding domain AHTJR_10640 PF00970 Oxidoreductase FAD-binding domain AHTJR_10645 PF00440 Bacterial regulatory proteins, tetR family AHTJR_10655 PF00210 Ferritin-like domain AHTJR_10660 PF00176 SNF2 family N-terminal domain AHTJR_10660 PF18339 RapA N-terminal Tudor like domain 1 AHTJR_10660 PF18337 RapA N-terminal Tudor like domain AHTJR_10660 PF12137 RNA polymerase recycling family C-terminal AHTJR_10660 PF00271 Helicase conserved C-terminal domain AHTJR_10665 PF00849 RNA pseudouridylate synthase AHTJR_10670 PF03928 Haem-degrading AHTJR_10675 PF00202 Aminotransferase class-III AHTJR_10680 PF02581 Thiamine monophosphate synthase AHTJR_10705 PF01699 Sodium/calcium exchanger protein AHTJR_10710 PF05193 Peptidase M16 inactive domain AHTJR_10710 PF00675 Insulinase (Peptidase family M16) AHTJR_10715 PF02567 Phenazine biosynthesis-like protein AHTJR_10725 PF00180 Isocitrate/isopropylmalate dehydrogenase AHTJR_10730 PF00849 RNA pseudouridylate synthase AHTJR_10735 PF03971 Monomeric isocitrate dehydrogenase AHTJR_10740 PF00576 HIUase/Transthyretin family AHTJR_10750 PF00768 D-alanyl-D-alanine carboxypeptidase AHTJR_10750 PF07943 Penicillin-binding protein 5, C-terminal domain AHTJR_10755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_10760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AHTJR_10765 PF00875 DNA photolyase AHTJR_10765 PF03441 FAD binding domain of DNA photolyase AHTJR_10785 PF01654 Cytochrome bd terminal oxidase subunit I AHTJR_10790 PF02322 Cytochrome bd terminal oxidase subunit II AHTJR_10795 PF03060 Nitronate monooxygenase AHTJR_10800 PF13089 Polyphosphate kinase N-terminal domain AHTJR_10800 PF17941 Polyphosphate kinase C-terminal domain 1 AHTJR_10800 PF13090 Polyphosphate kinase C-terminal domain 2 AHTJR_10800 PF02503 Polyphosphate kinase middle domain AHTJR_10805 PF00912 Transglycosylase AHTJR_10810 PF01694 Rhomboid family AHTJR_10825 PF00005 ABC transporter AHTJR_10830 PF13472 GDSL-like Lipase/Acylhydrolase family AHTJR_10835 PF00583 Acetyltransferase (GNAT) family AHTJR_10840 PF00484 Carbonic anhydrase AHTJR_10845 PF13936 Helix-turn-helix domain AHTJR_10845 PF00665 Integrase core domain AHTJR_10850 PF00561 alpha/beta hydrolase fold AHTJR_10860 PF00593 TonB dependent receptor AHTJR_10860 PF07715 TonB-dependent Receptor Plug Domain AHTJR_10865 PF01106 NifU-like domain AHTJR_10865 PF01521 Iron-sulphur cluster biosynthesis AHTJR_10880 PF00152 tRNA synthetases class II (D, K and N) AHTJR_10885 PF11890 Domain of unknown function (DUF3410) AHTJR_10885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AHTJR_10885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AHTJR_10890 PF01219 Prokaryotic diacylglycerol kinase AHTJR_10900 PF00118 TCP-1/cpn60 chaperonin family AHTJR_10905 PF00166 Chaperonin 10 Kd subunit AHTJR_10910 PF00149 Calcineurin-like phosphoesterase AHTJR_10915 PF00781 Diacylglycerol kinase catalytic domain AHTJR_10920 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AHTJR_10920 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AHTJR_10940 PF17287 POTRA domain AHTJR_10940 PF08479 POTRA domain, ShlB-type AHTJR_10940 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AHTJR_10945 PF07715 TonB-dependent Receptor Plug Domain AHTJR_10945 PF07660 Secretin and TonB N terminus short domain AHTJR_10945 PF00593 TonB dependent receptor AHTJR_10950 PF01266 FAD dependent oxidoreductase AHTJR_10950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AHTJR_10955 PF08220 DeoR-like helix-turn-helix domain AHTJR_10955 PF00455 DeoR C terminal sensor domain AHTJR_10960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AHTJR_10960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AHTJR_10970 PF14542 GCN5-related N-acetyl-transferase AHTJR_10980 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AHTJR_10980 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AHTJR_10995 PF09423 PhoD-like phosphatase AHTJR_10995 PF16655 PhoD-like phosphatase, N-terminal domain AHTJR_11010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AHTJR_11015 PF07152 YaeQ protein AHTJR_11020 PF07683 Cobalamin synthesis protein cobW C-terminal domain AHTJR_11020 PF02492 CobW/HypB/UreG, nucleotide-binding domain AHTJR_11030 PF03061 Thioesterase superfamily AHTJR_11050 PF07690 Major Facilitator Superfamily AHTJR_11055 PF00378 Enoyl-CoA hydratase/isomerase AHTJR_11060 PF00171 Aldehyde dehydrogenase family AHTJR_11070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_11070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_11070 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_11075 PF03573 outer membrane porin, OprD family AHTJR_11085 PF07519 Tannase and feruloyl esterase AHTJR_11090 PF01494 FAD binding domain AHTJR_11095 PF01614 Bacterial transcriptional regulator AHTJR_11095 PF09339 IclR helix-turn-helix domain AHTJR_11110 PF03949 Malic enzyme, NAD binding domain AHTJR_11110 PF00390 Malic enzyme, N-terminal domain AHTJR_11115 PF00324 Amino acid permease AHTJR_11120 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AHTJR_11125 PF04996 Succinylarginine dihydrolase AHTJR_11130 PF00171 Aldehyde dehydrogenase family AHTJR_11135 PF04958 Arginine N-succinyltransferase beta subunit AHTJR_11140 PF00202 Aminotransferase class-III AHTJR_11145 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AHTJR_11145 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AHTJR_11155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_11155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_11155 PF09317 Domain of unknown function (DUF1974) AHTJR_11160 PF00465 Iron-containing alcohol dehydrogenase AHTJR_11170 PF00171 Aldehyde dehydrogenase family AHTJR_11210 PF13356 Arm DNA-binding domain AHTJR_11210 PF00589 Phage integrase family AHTJR_11235 PF00665 Integrase core domain AHTJR_11235 PF13936 Helix-turn-helix domain AHTJR_11245 PF01381 Helix-turn-helix AHTJR_11260 PF07690 Major Facilitator Superfamily AHTJR_11265 PF00529 HlyD membrane-fusion protein of T1SS AHTJR_11265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHTJR_11270 PF03061 Thioesterase superfamily AHTJR_11275 PF00490 Delta-aminolevulinic acid dehydratase AHTJR_11280 PF01266 FAD dependent oxidoreductase AHTJR_11285 PF08338 Domain of unknown function (DUF1731) AHTJR_11285 PF01370 NAD dependent epimerase/dehydratase family AHTJR_11300 PF00378 Enoyl-CoA hydratase/isomerase AHTJR_11305 PF02028 BCCT, betaine/carnitine/choline family transporter AHTJR_11310 PF00149 Calcineurin-like phosphoesterase AHTJR_11310 PF12320 Type 5 capsule protein repressor C-terminal domain AHTJR_11320 PF01168 Alanine racemase, N-terminal domain AHTJR_11325 PF00437 Type II/IV secretion system protein AHTJR_11330 PF00437 Type II/IV secretion system protein AHTJR_11335 PF01475 Ferric uptake regulator family AHTJR_11340 PF04355 SmpA / OmlA family AHTJR_11345 PF03658 RnfH family Ubiquitin AHTJR_11355 PF01814 Hemerythrin HHE cation binding domain AHTJR_11360 PF13230 Glutamine amidotransferases class-II AHTJR_11375 PF00696 Amino acid kinase family AHTJR_11380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AHTJR_11380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AHTJR_11380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AHTJR_11380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AHTJR_11385 PF00692 dUTPase AHTJR_11390 PF00580 UvrD/REP helicase N-terminal domain AHTJR_11390 PF13361 UvrD-like helicase C-terminal domain AHTJR_11395 PF13488 Glycine zipper AHTJR_11395 PF00691 OmpA family AHTJR_11400 PF01553 Acyltransferase AHTJR_11410 PF03775 Septum formation inhibitor MinC, C-terminal domain AHTJR_11415 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AHTJR_11420 PF03776 Septum formation topological specificity factor MinE AHTJR_11430 PF01810 LysE type translocator AHTJR_11435 PF09397 Ftsk gamma domain AHTJR_11435 PF01580 FtsK/SpoIIIE family AHTJR_11435 PF17854 FtsK alpha domain AHTJR_11435 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AHTJR_11440 PF07992 Pyridine nucleotide-disulphide oxidoreductase AHTJR_11445 PF10119 Predicted methyltransferase regulatory domain AHTJR_11445 PF13847 Methyltransferase domain AHTJR_11455 PF04377 Arginine-tRNA-protein transferase, C terminus AHTJR_11455 PF04376 Arginine-tRNA-protein transferase, N terminus AHTJR_11460 PF00583 Acetyltransferase (GNAT) family AHTJR_11480 PF00009 Elongation factor Tu GTP binding domain AHTJR_11480 PF03144 Elongation factor Tu domain 2 AHTJR_11480 PF03143 Elongation factor Tu C-terminal domain AHTJR_11485 PF03764 Elongation factor G, domain IV AHTJR_11485 PF00009 Elongation factor Tu GTP binding domain AHTJR_11485 PF00679 Elongation factor G C-terminus AHTJR_11485 PF03144 Elongation factor Tu domain 2 AHTJR_11485 PF14492 Elongation Factor G, domain II AHTJR_11490 PF00177 Ribosomal protein S7p/S5e AHTJR_11495 PF00164 Ribosomal protein S12/S23 AHTJR_11505 PF02801 Beta-ketoacyl synthase, C-terminal domain AHTJR_11505 PF00109 Beta-ketoacyl synthase, N-terminal domain AHTJR_11525 PF00795 Carbon-nitrogen hydrolase AHTJR_11525 PF02540 NAD synthase AHTJR_11550 PF00037 4Fe-4S binding domain AHTJR_11555 PF01467 Cytidylyltransferase-like AHTJR_11560 PF01668 SmpB protein AHTJR_11570 PF03358 NADPH-dependent FMN reductase AHTJR_11580 PF00849 RNA pseudouridylate synthase AHTJR_11580 PF01479 S4 domain AHTJR_11585 PF13525 Outer membrane lipoprotein AHTJR_11590 PF10410 DnaB-helicase binding domain of primase AHTJR_11590 PF08275 DNA primase catalytic core, N-terminal domain AHTJR_11590 PF08278 DNA primase DnaG DnaB-binding AHTJR_11590 PF01807 CHC2 zinc finger AHTJR_11595 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AHTJR_11595 PF01488 Shikimate / quinate 5-dehydrogenase AHTJR_11595 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AHTJR_11605 PF03550 Outer membrane lipoprotein LolB AHTJR_11610 PF00288 GHMP kinases N terminal domain AHTJR_11610 PF08544 GHMP kinases C terminal AHTJR_11635 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AHTJR_11635 PF14572 Phosphoribosyl synthetase-associated domain AHTJR_11640 PF01386 Ribosomal L25p family AHTJR_11645 PF01195 Peptidyl-tRNA hydrolase AHTJR_11650 PF02261 Aspartate decarboxylase AHTJR_11655 PF00027 Cyclic nucleotide-binding domain AHTJR_11655 PF01734 Patatin-like phospholipase AHTJR_11670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AHTJR_11675 PF13419 Haloacid dehalogenase-like hydrolase AHTJR_11680 PF02581 Thiamine monophosphate synthase AHTJR_11680 PF03070 TENA/THI-4/PQQC family AHTJR_11680 PF08543 Phosphomethylpyrimidine kinase AHTJR_11690 PF00593 TonB dependent receptor AHTJR_11690 PF07715 TonB-dependent Receptor Plug Domain AHTJR_11695 PF01476 LysM domain AHTJR_11695 PF04972 BON domain AHTJR_11700 PF00550 Phosphopantetheine attachment site AHTJR_11705 PF00550 Phosphopantetheine attachment site AHTJR_11715 PF00698 Acyl transferase domain AHTJR_11720 PF01783 Ribosomal L32p protein family AHTJR_11725 PF02620 Large ribosomal RNA subunit accumulation protein YceD AHTJR_11730 PF04315 Elongation factor P hydroxylase AHTJR_11735 PF01300 Telomere recombination AHTJR_11750 PF02616 Segregation and condensation protein ScpA AHTJR_11755 PF04079 Segregation and condensation complex subunit ScpB AHTJR_11760 PF01479 S4 domain AHTJR_11760 PF00849 RNA pseudouridylate synthase AHTJR_11765 PF00005 ABC transporter AHTJR_11765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AHTJR_11770 PF12911 N-terminal TM domain of oligopeptide transport permease C AHTJR_11770 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_11775 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_11785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AHTJR_11795 PF00593 TonB dependent receptor AHTJR_11795 PF07715 TonB-dependent Receptor Plug Domain AHTJR_11805 PF01618 MotA/TolQ/ExbB proton channel family AHTJR_11810 PF02472 Biopolymer transport protein ExbD/TolR AHTJR_11815 PF02472 Biopolymer transport protein ExbD/TolR AHTJR_11835 PF00155 Aminotransferase class I and II AHTJR_11840 PF06968 Biotin and Thiamin Synthesis associated domain AHTJR_11840 PF04055 Radical SAM superfamily AHTJR_11840 PF00202 Aminotransferase class-III AHTJR_11845 PF12697 Alpha/beta hydrolase family AHTJR_11845 PF08241 Methyltransferase domain AHTJR_11855 PF00578 AhpC/TSA family AHTJR_11860 PF00210 Ferritin-like domain AHTJR_11870 PF01653 NAD-dependent DNA ligase adenylation domain AHTJR_11870 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AHTJR_11870 PF03120 NAD-dependent DNA ligase OB-fold domain AHTJR_11870 PF00533 BRCA1 C Terminus (BRCT) domain AHTJR_11870 PF12826 Helix-hairpin-helix motif AHTJR_11880 PF06470 SMC proteins Flexible Hinge Domain AHTJR_11880 PF02463 RecF/RecN/SMC N terminal domain AHTJR_11890 PF01925 Sulfite exporter TauE/SafE AHTJR_11900 PF03309 Type III pantothenate kinase AHTJR_11910 PF02881 SRP54-type protein, helical bundle domain AHTJR_11910 PF00448 SRP54-type protein, GTPase domain AHTJR_11910 PF02978 Signal peptide binding domain AHTJR_11925 PF01207 Dihydrouridine synthase (Dus) AHTJR_11955 PF00692 dUTPase AHTJR_11975 PF16868 NMT1-like family AHTJR_11990 PF01048 Phosphorylase superfamily AHTJR_11995 PF10609 NUBPL iron-transfer P-loop NTPase AHTJR_12005 PF13302 Acetyltransferase (GNAT) domain AHTJR_12015 PF09334 tRNA synthetases class I (M) AHTJR_12015 PF01588 Putative tRNA binding domain AHTJR_12030 PF10996 Beta-Casp domain AHTJR_12030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AHTJR_12030 PF00753 Metallo-beta-lactamase superfamily AHTJR_12045 PF13533 Biotin-lipoyl like AHTJR_12050 PF00291 Pyridoxal-phosphate dependent enzyme AHTJR_12060 PF05552 Conserved TM helix AHTJR_12075 PF00970 Oxidoreductase FAD-binding domain AHTJR_12075 PF00175 Oxidoreductase NAD-binding domain AHTJR_12080 PF03466 LysR substrate binding domain AHTJR_12080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_12095 PF00361 Proton-conducting membrane transporter AHTJR_12100 PF00361 Proton-conducting membrane transporter AHTJR_12105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AHTJR_12105 PF00361 Proton-conducting membrane transporter AHTJR_12110 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AHTJR_12115 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AHTJR_12120 PF12838 4Fe-4S dicluster domain AHTJR_12125 PF00146 NADH dehydrogenase AHTJR_12130 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AHTJR_12130 PF00384 Molybdopterin oxidoreductase AHTJR_12130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AHTJR_12135 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AHTJR_12135 PF10531 SLBB domain AHTJR_12135 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AHTJR_12145 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AHTJR_12145 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AHTJR_12150 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AHTJR_12155 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AHTJR_12165 PF13737 Transposase DDE domain AHTJR_12180 PF00672 HAMP domain AHTJR_12180 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_12185 PF00072 Response regulator receiver domain AHTJR_12185 PF00486 Transcriptional regulatory protein, C terminal AHTJR_12190 PF03477 ATP cone domain AHTJR_12190 PF02867 Ribonucleotide reductase, barrel domain AHTJR_12190 PF00317 Ribonucleotide reductase, all-alpha domain AHTJR_12200 PF00268 Ribonucleotide reductase, small chain AHTJR_12215 PF13732 Domain of unknown function (DUF4162) AHTJR_12215 PF00005 ABC transporter AHTJR_12220 PF00155 Aminotransferase class I and II AHTJR_12225 PF00324 Amino acid permease AHTJR_12235 PF02798 Glutathione S-transferase, N-terminal domain AHTJR_12235 PF14497 Glutathione S-transferase, C-terminal domain AHTJR_12250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AHTJR_12255 PF06039 Malate:quinone oxidoreductase (Mqo) AHTJR_12260 PF05977 Transmembrane secretion effector AHTJR_12270 PF02028 BCCT, betaine/carnitine/choline family transporter AHTJR_12275 PF02028 BCCT, betaine/carnitine/choline family transporter AHTJR_12280 PF13977 BetI-type transcriptional repressor, C-terminal AHTJR_12280 PF00440 Bacterial regulatory proteins, tetR family AHTJR_12285 PF00171 Aldehyde dehydrogenase family AHTJR_12290 PF05199 GMC oxidoreductase AHTJR_12290 PF00732 GMC oxidoreductase AHTJR_12300 PF00107 Zinc-binding dehydrogenase AHTJR_12300 PF08240 Alcohol dehydrogenase GroES-like domain AHTJR_12315 PF00732 GMC oxidoreductase AHTJR_12315 PF05199 GMC oxidoreductase AHTJR_12345 PF02445 Quinolinate synthetase A protein AHTJR_12350 PF01960 ArgJ family AHTJR_12355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AHTJR_12355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AHTJR_12360 PF00893 Small Multidrug Resistance protein AHTJR_12375 PF05275 Copper resistance protein B precursor (CopB) AHTJR_12380 PF07732 Multicopper oxidase AHTJR_12380 PF07731 Multicopper oxidase AHTJR_12380 PF00394 Multicopper oxidase AHTJR_12390 PF00834 Ribulose-phosphate 3 epimerase family AHTJR_12400 PF00756 Putative esterase AHTJR_12410 PF04445 Putative SAM-dependent methyltransferase AHTJR_12415 PF02673 Bacitracin resistance protein BacA AHTJR_12420 PF00814 Glycoprotease family AHTJR_12425 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_12430 PF00293 NUDIX domain AHTJR_12470 PF04715 Anthranilate synthase component I, N terminal region AHTJR_12470 PF00425 chorismate binding enzyme AHTJR_12475 PF00155 Aminotransferase class I and II AHTJR_12480 PF00815 Histidinol dehydrogenase AHTJR_12490 PF08281 Sigma-70, region 4 AHTJR_12490 PF04542 Sigma-70 region 2 AHTJR_12490 PF12680 SnoaL-like domain AHTJR_12495 PF01634 ATP phosphoribosyltransferase AHTJR_12500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AHTJR_12505 PF01722 BolA-like protein AHTJR_12510 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AHTJR_12515 PF04552 Sigma-54, DNA binding domain AHTJR_12515 PF00309 Sigma-54 factor, Activator interacting domain (AID) AHTJR_12515 PF04963 Sigma-54 factor, core binding domain AHTJR_12560 PF00795 Carbon-nitrogen hydrolase AHTJR_12570 PF02566 OsmC-like protein AHTJR_12575 PF00437 Type II/IV secretion system protein AHTJR_12595 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AHTJR_12595 PF01612 3'-5' exonuclease AHTJR_12595 PF01367 5'-3' exonuclease, C-terminal SAM fold AHTJR_12595 PF00476 DNA polymerase family A AHTJR_12600 PF02325 YGGT family AHTJR_12605 PF14748 Pyrroline-5-carboxylate reductase dimerisation AHTJR_12605 PF03807 NADP oxidoreductase coenzyme F420-dependent AHTJR_12610 PF09179 TilS substrate binding domain AHTJR_12610 PF11734 TilS substrate C-terminal domain AHTJR_12610 PF01171 PP-loop family AHTJR_12615 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AHTJR_12620 PF02541 Ppx/GppA phosphatase family AHTJR_12625 PF00085 Thioredoxin AHTJR_12630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AHTJR_12630 PF07498 Rho termination factor, N-terminal domain AHTJR_12630 PF07497 Rho termination factor, RNA-binding domain AHTJR_12640 PF00216 Bacterial DNA-binding protein AHTJR_12645 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AHTJR_12645 PF01588 Putative tRNA binding domain AHTJR_12645 PF03147 Ferredoxin-fold anticodon binding domain AHTJR_12645 PF03483 B3/4 domain AHTJR_12645 PF03484 tRNA synthetase B5 domain AHTJR_12650 PF01409 tRNA synthetases class II core domain (F) AHTJR_12650 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AHTJR_12670 PF00453 Ribosomal protein L20 AHTJR_12675 PF01632 Ribosomal protein L35 AHTJR_12680 PF09335 SNARE associated Golgi protein AHTJR_12695 PF02798 Glutathione S-transferase, N-terminal domain AHTJR_12695 PF00043 Glutathione S-transferase, C-terminal domain AHTJR_12705 PF00707 Translation initiation factor IF-3, C-terminal domain AHTJR_12705 PF05198 Translation initiation factor IF-3, N-terminal domain AHTJR_12710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AHTJR_12710 PF02824 TGS domain AHTJR_12710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AHTJR_12710 PF03129 Anticodon binding domain AHTJR_12715 PF13193 AMP-binding enzyme C-terminal domain AHTJR_12715 PF00501 AMP-binding enzyme AHTJR_12720 PF04751 Protein of unknown function (DUF615) AHTJR_12725 PF00381 PTS HPr component phosphorylation site AHTJR_12730 PF03668 P-loop ATPase protein family AHTJR_12735 PF02569 Pantoate-beta-alanine ligase AHTJR_12740 PF02548 Ketopantoate hydroxymethyltransferase AHTJR_12745 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AHTJR_12750 PF01743 Poly A polymerase head domain AHTJR_12750 PF12627 Probable RNA and SrmB- binding site of polymerase A AHTJR_12750 PF12626 Polymerase A arginine-rich C-terminus AHTJR_12760 PF03819 MazG nucleotide pyrophosphohydrolase domain AHTJR_12775 PF02824 TGS domain AHTJR_12775 PF04607 Region found in RelA / SpoT proteins AHTJR_12775 PF13291 ACT domain AHTJR_12780 PF05958 tRNA (Uracil-5-)-methyltransferase AHTJR_12790 PF00291 Pyridoxal-phosphate dependent enzyme AHTJR_12795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_12795 PF00672 HAMP domain AHTJR_12795 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_12795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AHTJR_12795 PF00072 Response regulator receiver domain AHTJR_12795 PF01627 Hpt domain AHTJR_12800 PF00378 Enoyl-CoA hydratase/isomerase AHTJR_12805 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AHTJR_12805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AHTJR_12810 PF01261 Xylose isomerase-like TIM barrel AHTJR_12820 PF00106 short chain dehydrogenase AHTJR_12825 PF02233 NAD(P) transhydrogenase beta subunit AHTJR_12830 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AHTJR_12835 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AHTJR_12835 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AHTJR_12840 PF09278 MerR, DNA binding AHTJR_12840 PF00376 MerR family regulatory protein AHTJR_12850 PF07690 Major Facilitator Superfamily AHTJR_12855 PF05721 Phytanoyl-CoA dioxygenase (PhyH) AHTJR_12865 PF00202 Aminotransferase class-III AHTJR_12870 PF00583 Acetyltransferase (GNAT) family AHTJR_12875 PF12802 MarR family AHTJR_12880 PF03358 NADPH-dependent FMN reductase AHTJR_12885 PF01758 Sodium Bile acid symporter family AHTJR_12895 PF01022 Bacterial regulatory protein, arsR family AHTJR_12900 PF03960 ArsC family AHTJR_12910 PF01207 Dihydrouridine synthase (Dus) AHTJR_12920 PF00899 ThiF family AHTJR_12930 PF00694 Aconitase C-terminal domain AHTJR_12930 PF00330 Aconitase family (aconitate hydratase) AHTJR_12935 PF01026 TatD related DNase AHTJR_12950 PF03144 Elongation factor Tu domain 2 AHTJR_12950 PF00009 Elongation factor Tu GTP binding domain AHTJR_12950 PF16658 Class II release factor RF3, C-terminal domain AHTJR_12975 PF04717 Type VI secretion system, phage-baseplate injector AHTJR_13035 PF00563 EAL domain AHTJR_13035 PF00990 Diguanylate cyclase, GGDEF domain AHTJR_13035 PF03707 Bacterial signalling protein N terminal repeat AHTJR_13040 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AHTJR_13040 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AHTJR_13045 PF10369 Small subunit of acetolactate synthase AHTJR_13050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AHTJR_13050 PF00205 Thiamine pyrophosphate enzyme, central domain AHTJR_13050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AHTJR_13060 PF00133 tRNA synthetases class I (I, L, M and V) AHTJR_13060 PF09334 tRNA synthetases class I (M) AHTJR_13060 PF13603 Leucyl-tRNA synthetase, Domain 2 AHTJR_13060 PF08264 Anticodon-binding domain of tRNA AHTJR_13070 PF06144 DNA polymerase III, delta subunit AHTJR_13075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHTJR_13080 PF00005 ABC transporter AHTJR_13080 PF12704 MacB-like periplasmic core domain AHTJR_13080 PF02687 FtsX-like permease family AHTJR_13085 PF02321 Outer membrane efflux protein AHTJR_13105 PF00929 Exonuclease AHTJR_13110 PF03193 RsgA GTPase AHTJR_13120 PF00462 Glutaredoxin AHTJR_13125 PF02556 Preprotein translocase subunit SecB AHTJR_13140 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AHTJR_13145 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AHTJR_13145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AHTJR_13155 PF04127 DNA / pantothenate metabolism flavoprotein AHTJR_13155 PF02441 Flavoprotein AHTJR_13160 PF04002 RadC-like JAB domain AHTJR_13165 PF01062 Bestrophin, RFP-TM, chloride channel AHTJR_13175 PF02811 PHP domain AHTJR_13180 PF04279 Intracellular septation protein A AHTJR_13195 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AHTJR_13195 PF01266 FAD dependent oxidoreductase AHTJR_13205 PF04461 Protein of unknown function (DUF520) AHTJR_13220 PF13185 GAF domain AHTJR_13225 PF03061 Thioesterase superfamily AHTJR_13230 PF00085 Thioredoxin AHTJR_13235 PF00561 alpha/beta hydrolase fold AHTJR_13240 PF00753 Metallo-beta-lactamase superfamily AHTJR_13240 PF04273 Putative phosphatase (DUF442) AHTJR_13280 PF01066 CDP-alcohol phosphatidyltransferase AHTJR_13285 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AHTJR_13305 PF00056 lactate/malate dehydrogenase, NAD binding domain AHTJR_13305 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AHTJR_13315 PF10145 Phage-related minor tail protein AHTJR_13315 PF01551 Peptidase family M23 AHTJR_13315 PF01464 Transglycosylase SLT domain AHTJR_13320 PF01938 TRAM domain AHTJR_13320 PF04055 Radical SAM superfamily AHTJR_13320 PF00919 Uncharacterized protein family UPF0004 AHTJR_13325 PF02562 PhoH-like protein AHTJR_13330 PF02130 Uncharacterized protein family UPF0054 AHTJR_13375 PF00303 Thymidylate synthase AHTJR_13380 PF00186 Dihydrofolate reductase AHTJR_13395 PF01625 Peptide methionine sulfoxide reductase AHTJR_13405 PF01618 MotA/TolQ/ExbB proton channel family AHTJR_13415 PF00551 Formyl transferase AHTJR_13415 PF01842 ACT domain AHTJR_13420 PF00440 Bacterial regulatory proteins, tetR family AHTJR_13420 PF08360 QacR-like protein, C-terminal region AHTJR_13425 PF00171 Aldehyde dehydrogenase family AHTJR_13430 PF00830 Ribosomal L28 family AHTJR_13435 PF00471 Ribosomal protein L33 AHTJR_13440 PF00999 Sodium/hydrogen exchanger family AHTJR_13440 PF02254 TrkA-N domain AHTJR_13460 PF13361 UvrD-like helicase C-terminal domain AHTJR_13460 PF00580 UvrD/REP helicase N-terminal domain AHTJR_13475 PF01396 Topoisomerase DNA binding C4 zinc finger AHTJR_13475 PF08272 Topoisomerase I zinc-ribbon-like AHTJR_13475 PF01751 Toprim domain AHTJR_13475 PF01131 DNA topoisomerase AHTJR_13505 PF03279 Bacterial lipid A biosynthesis acyltransferase AHTJR_13515 PF01118 Semialdehyde dehydrogenase, NAD binding domain AHTJR_13515 PF02774 Semialdehyde dehydrogenase, dimerisation domain AHTJR_13535 PF01416 tRNA pseudouridine synthase AHTJR_13545 PF01176 Translation initiation factor 1A / IF-1 AHTJR_13555 PF00180 Isocitrate/isopropylmalate dehydrogenase AHTJR_13565 PF00694 Aconitase C-terminal domain AHTJR_13570 PF00330 Aconitase family (aconitate hydratase) AHTJR_13580 PF03466 LysR substrate binding domain AHTJR_13580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_13590 PF00293 NUDIX domain AHTJR_13595 PF01590 GAF domain AHTJR_13595 PF00391 PEP-utilising enzyme, mobile domain AHTJR_13595 PF05524 PEP-utilising enzyme, N-terminal AHTJR_13595 PF02896 PEP-utilising enzyme, TIM barrel domain AHTJR_13605 PF00141 Peroxidase AHTJR_13610 PF04134 Protein of unknown function, DUF393 AHTJR_13620 PF12706 Beta-lactamase superfamily domain AHTJR_13625 PF02798 Glutathione S-transferase, N-terminal domain AHTJR_13640 PF01479 S4 domain AHTJR_13640 PF00849 RNA pseudouridylate synthase AHTJR_13650 PF00575 S1 RNA binding domain AHTJR_13650 PF12111 Polyribonucleotide phosphorylase C terminal AHTJR_13650 PF10150 Ribonuclease E/G family AHTJR_13655 PF00501 AMP-binding enzyme AHTJR_13655 PF13193 AMP-binding enzyme C-terminal domain AHTJR_13670 PF06969 HemN C-terminal domain AHTJR_13670 PF04055 Radical SAM superfamily AHTJR_13680 PF01554 MatE AHTJR_13685 PF03109 ABC1 family AHTJR_13690 PF01197 Ribosomal protein L31 AHTJR_13700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AHTJR_13710 PF01613 Flavin reductase like domain AHTJR_13720 PF00375 Sodium:dicarboxylate symporter family AHTJR_13735 PF03884 DNA gyrase inhibitor YacG AHTJR_13740 PF01244 Membrane dipeptidase (Peptidase family M19) AHTJR_13745 PF13186 Iron-sulfur cluster-binding domain AHTJR_13745 PF04055 Radical SAM superfamily AHTJR_13750 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AHTJR_13755 PF03070 TENA/THI-4/PQQC family AHTJR_13760 PF12706 Beta-lactamase superfamily domain AHTJR_13765 PF08042 PqqA family AHTJR_13775 PF00753 Metallo-beta-lactamase superfamily AHTJR_13780 PF00762 Ferrochelatase AHTJR_13790 PF01177 Asp/Glu/Hydantoin racemase AHTJR_13805 PF01206 Sulfurtransferase TusA AHTJR_13810 PF03471 Transporter associated domain AHTJR_13810 PF00571 CBS domain AHTJR_13815 PF00795 Carbon-nitrogen hydrolase AHTJR_13825 PF08334 Type II secretion system (T2SS), protein G AHTJR_13825 PF07963 Prokaryotic N-terminal methylation motif AHTJR_13830 PF00482 Type II secretion system (T2SS), protein F AHTJR_13835 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AHTJR_13835 PF18074 Primosomal protein N C-terminal domain AHTJR_13835 PF17764 3′ DNA-binding domain (3′BD) AHTJR_13835 PF00271 Helicase conserved C-terminal domain AHTJR_13835 PF00270 DEAD/DEAH box helicase AHTJR_13840 PF00999 Sodium/hydrogen exchanger family AHTJR_13840 PF02254 TrkA-N domain AHTJR_13845 PF01430 Hsp33 protein AHTJR_13855 PF00226 DnaJ domain AHTJR_13855 PF01556 DnaJ C terminal domain AHTJR_13865 PF01544 CorA-like Mg2+ transporter protein AHTJR_13870 PF01138 3' exoribonuclease family, domain 1 AHTJR_13870 PF00575 S1 RNA binding domain AHTJR_13870 PF03725 3' exoribonuclease family, domain 2 AHTJR_13870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AHTJR_13870 PF00013 KH domain AHTJR_13875 PF00312 Ribosomal protein S15 AHTJR_13885 PF13538 UvrD-like helicase C-terminal domain AHTJR_13890 PF00580 UvrD/REP helicase N-terminal domain AHTJR_13890 PF12705 PD-(D/E)XK nuclease superfamily AHTJR_13890 PF13361 UvrD-like helicase C-terminal domain AHTJR_13895 PF17946 RecC C-terminal domain AHTJR_13905 PF07690 Major Facilitator Superfamily AHTJR_13910 PF03976 Polyphosphate kinase 2 (PPK2) AHTJR_13920 PF01209 ubiE/COQ5 methyltransferase family AHTJR_13930 PF03109 ABC1 family AHTJR_13945 PF00005 ABC transporter AHTJR_13950 PF01494 FAD binding domain AHTJR_13955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AHTJR_13960 PF01502 Phosphoribosyl-AMP cyclohydrolase AHTJR_13975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AHTJR_13975 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AHTJR_13975 PF13244 Domain of unknown function (DUF4040) AHTJR_13975 PF00361 Proton-conducting membrane transporter AHTJR_13980 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AHTJR_13985 PF00361 Proton-conducting membrane transporter AHTJR_13995 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AHTJR_14005 PF02033 Ribosome-binding factor A AHTJR_14010 PF04760 Translation initiation factor IF-2, N-terminal region AHTJR_14010 PF08364 Bacterial translation initiation factor IF-2 associated region AHTJR_14010 PF11987 Translation-initiation factor 2 AHTJR_14010 PF00009 Elongation factor Tu GTP binding domain AHTJR_14015 PF00575 S1 RNA binding domain AHTJR_14015 PF13184 NusA-like KH domain AHTJR_14015 PF08529 NusA N-terminal domain AHTJR_14020 PF02576 RimP N-terminal domain AHTJR_14020 PF17384 RimP C-terminal SH3 domain AHTJR_14040 PF03840 Preprotein translocase SecG subunit AHTJR_14045 PF00121 Triosephosphate isomerase AHTJR_14050 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AHTJR_14050 PF00437 Type II/IV secretion system protein AHTJR_14055 PF00482 Type II secretion system (T2SS), protein F AHTJR_14060 PF01478 Type IV leader peptidase family AHTJR_14060 PF06750 Bacterial Peptidase A24 N-terminal domain AHTJR_14065 PF01121 Dephospho-CoA kinase AHTJR_14080 PF08032 RNA 2'-O ribose methyltransferase substrate binding AHTJR_14080 PF00588 SpoU rRNA Methylase family AHTJR_14085 PF06865 Pyrimidine/purine nucleoside phosphorylase AHTJR_14090 PF02463 RecF/RecN/SMC N terminal domain AHTJR_14095 PF02622 Uncharacterized ACR, COG1678 AHTJR_14100 PF03652 Holliday junction resolvase AHTJR_14105 PF13533 Biotin-lipoyl like AHTJR_14130 PF01066 CDP-alcohol phosphatidyltransferase AHTJR_14140 PF01541 GIY-YIG catalytic domain AHTJR_14140 PF08459 UvrC Helix-hairpin-helix N-terminal AHTJR_14140 PF02151 UvrB/uvrC motif AHTJR_14150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AHTJR_14150 PF00378 Enoyl-CoA hydratase/isomerase AHTJR_14150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AHTJR_14155 PF02803 Thiolase, C-terminal domain AHTJR_14155 PF00108 Thiolase, N-terminal domain AHTJR_14170 PF00664 ABC transporter transmembrane region AHTJR_14170 PF00005 ABC transporter AHTJR_14180 PF01323 DSBA-like thioredoxin domain AHTJR_14200 PF00183 Hsp90 protein AHTJR_14200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_14210 PF13726 Na+-H+ antiporter family AHTJR_14210 PF03553 Na+/H+ antiporter family AHTJR_14240 PF00623 RNA polymerase Rpb1, domain 2 AHTJR_14240 PF04983 RNA polymerase Rpb1, domain 3 AHTJR_14240 PF05000 RNA polymerase Rpb1, domain 4 AHTJR_14240 PF04998 RNA polymerase Rpb1, domain 5 AHTJR_14240 PF04997 RNA polymerase Rpb1, domain 1 AHTJR_14245 PF10385 RNA polymerase beta subunit external 1 domain AHTJR_14245 PF04563 RNA polymerase beta subunit AHTJR_14245 PF00562 RNA polymerase Rpb2, domain 6 AHTJR_14245 PF04560 RNA polymerase Rpb2, domain 7 AHTJR_14245 PF04565 RNA polymerase Rpb2, domain 3 AHTJR_14245 PF04561 RNA polymerase Rpb2, domain 2 AHTJR_14250 PF00542 Ribosomal protein L7/L12 C-terminal domain AHTJR_14250 PF16320 Ribosomal protein L7/L12 dimerisation domain AHTJR_14255 PF00466 Ribosomal protein L10 AHTJR_14260 PF00687 Ribosomal protein L1p/L10e family AHTJR_14265 PF00298 Ribosomal protein L11, RNA binding domain AHTJR_14265 PF03946 Ribosomal protein L11, N-terminal domain AHTJR_14270 PF00467 KOW motif AHTJR_14270 PF02357 Transcription termination factor nusG AHTJR_14275 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AHTJR_14285 PF03143 Elongation factor Tu C-terminal domain AHTJR_14285 PF00009 Elongation factor Tu GTP binding domain AHTJR_14285 PF03144 Elongation factor Tu domain 2 AHTJR_14310 PF04715 Anthranilate synthase component I, N terminal region AHTJR_14310 PF00425 chorismate binding enzyme AHTJR_14315 PF13419 Haloacid dehalogenase-like hydrolase AHTJR_14320 PF16697 Inner membrane component of T3SS, cytoplasmic domain AHTJR_14325 PF00263 Bacterial type II and III secretion system protein AHTJR_14325 PF03958 Bacterial type II/III secretion system short domain AHTJR_14340 PF00816 H-NS histone family AHTJR_14365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AHTJR_14365 PF03900 Porphobilinogen deaminase, C-terminal domain AHTJR_14370 PF00072 Response regulator receiver domain AHTJR_14370 PF04397 LytTr DNA-binding domain AHTJR_14375 PF06580 Histidine kinase AHTJR_14375 PF07694 5TMR of 5TMR-LYT AHTJR_14375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_14380 PF00206 Lyase AHTJR_14380 PF14698 Argininosuccinate lyase C-terminal AHTJR_14385 PF04362 Bacterial Fe(2+) trafficking AHTJR_14390 PF01895 PhoU domain AHTJR_14395 PF13667 ThiC-associated domain AHTJR_14395 PF01964 Radical SAM ThiC family AHTJR_14400 PF00293 NUDIX domain AHTJR_14405 PF00149 Calcineurin-like phosphoesterase AHTJR_14410 PF01258 Prokaryotic dksA/traR C4-type zinc finger AHTJR_14415 PF00749 tRNA synthetases class I (E and Q), catalytic domain AHTJR_14420 PF01098 Cell cycle protein AHTJR_14425 PF02875 Mur ligase family, glutamate ligase domain AHTJR_14425 PF08245 Mur ligase middle domain AHTJR_14435 PF07664 Ferrous iron transport protein B C terminus AHTJR_14435 PF02421 Ferrous iron transport protein B AHTJR_14435 PF07670 Nucleoside recognition AHTJR_14445 PF02899 Phage integrase, N-terminal SAM-like domain AHTJR_14445 PF00589 Phage integrase family AHTJR_14450 PF13098 Thioredoxin-like domain AHTJR_14450 PF10411 Disulfide bond isomerase protein N-terminus AHTJR_14455 PF03447 Homoserine dehydrogenase, NAD binding domain AHTJR_14455 PF00742 Homoserine dehydrogenase AHTJR_14455 PF01842 ACT domain AHTJR_14460 PF00291 Pyridoxal-phosphate dependent enzyme AHTJR_14465 PF00768 D-alanyl-D-alanine carboxypeptidase AHTJR_14470 PF00072 Response regulator receiver domain AHTJR_14470 PF00196 Bacterial regulatory proteins, luxR family AHTJR_14475 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_14480 PF02954 Bacterial regulatory protein, Fis family AHTJR_14480 PF00158 Sigma-54 interaction domain AHTJR_14480 PF00072 Response regulator receiver domain AHTJR_14485 PF13180 PDZ domain AHTJR_14485 PF03572 Peptidase family S41 AHTJR_14490 PF01676 Metalloenzyme superfamily AHTJR_14490 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AHTJR_14495 PF03739 Lipopolysaccharide export system permease LptF/LptG AHTJR_14500 PF03739 Lipopolysaccharide export system permease LptF/LptG AHTJR_14505 PF02789 Cytosol aminopeptidase family, N-terminal domain AHTJR_14505 PF00883 Cytosol aminopeptidase family, catalytic domain AHTJR_14520 PF00677 Lumazine binding domain AHTJR_14525 PF00230 Major intrinsic protein AHTJR_14535 PF01872 RibD C-terminal domain AHTJR_14535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AHTJR_14540 PF03477 ATP cone domain AHTJR_14545 PF00909 Ammonium Transporter Family AHTJR_14550 PF00543 Nitrogen regulatory protein P-II AHTJR_14560 PF01078 Magnesium chelatase, subunit ChlI AHTJR_14560 PF13335 Magnesium chelatase, subunit ChlI C-terminal AHTJR_14610 PF16916 Dimerisation domain of Zinc Transporter AHTJR_14610 PF01545 Cation efflux family AHTJR_14625 PF02321 Outer membrane efflux protein AHTJR_14630 PF00873 AcrB/AcrD/AcrF family AHTJR_14635 PF00529 HlyD membrane-fusion protein of T1SS AHTJR_14635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHTJR_14640 PF01545 Cation efflux family AHTJR_14650 PF01022 Bacterial regulatory protein, arsR family AHTJR_14655 PF00403 Heavy-metal-associated domain AHTJR_14660 PF00376 MerR family regulatory protein AHTJR_14660 PF09278 MerR, DNA binding AHTJR_14690 PF07690 Major Facilitator Superfamily AHTJR_14710 PF00873 AcrB/AcrD/AcrF family AHTJR_14715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHTJR_14715 PF00529 HlyD membrane-fusion protein of T1SS AHTJR_14730 PF00111 2Fe-2S iron-sulfur cluster binding domain AHTJR_14780 PF13335 Magnesium chelatase, subunit ChlI C-terminal AHTJR_14780 PF01078 Magnesium chelatase, subunit ChlI AHTJR_14800 PF00719 Inorganic pyrophosphatase AHTJR_14815 PF13193 AMP-binding enzyme C-terminal domain AHTJR_14815 PF00501 AMP-binding enzyme AHTJR_14820 PF03989 DNA gyrase C-terminal domain, beta-propeller AHTJR_14820 PF00521 DNA gyrase/topoisomerase IV, subunit A AHTJR_14825 PF03458 UPF0126 domain AHTJR_14830 PF02810 SEC-C motif AHTJR_14835 PF03741 Integral membrane protein TerC family AHTJR_14835 PF03471 Transporter associated domain AHTJR_14845 PF03641 Possible lysine decarboxylase AHTJR_14855 PF07690 Major Facilitator Superfamily AHTJR_14865 PF00817 impB/mucB/samB family AHTJR_14865 PF11798 IMS family HHH motif AHTJR_14865 PF11799 impB/mucB/samB family C-terminal domain AHTJR_14880 PF11842 Domain of unknown function (DUF3362) AHTJR_14880 PF08497 Radical SAM N-terminal AHTJR_14880 PF04055 Radical SAM superfamily AHTJR_14890 PF07690 Major Facilitator Superfamily AHTJR_14900 PF00291 Pyridoxal-phosphate dependent enzyme AHTJR_14910 PF00665 Integrase core domain AHTJR_14910 PF02796 Helix-turn-helix domain of resolvase AHTJR_14915 PF01695 IstB-like ATP binding protein AHTJR_14950 PF02028 BCCT, betaine/carnitine/choline family transporter AHTJR_14965 PF00474 Sodium:solute symporter family AHTJR_14970 PF04341 Protein of unknown function, DUF485 AHTJR_14975 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_14975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_14985 PF00593 TonB dependent receptor AHTJR_14985 PF07715 TonB-dependent Receptor Plug Domain AHTJR_14995 PF01327 Polypeptide deformylase AHTJR_15000 PF01476 LysM domain AHTJR_15005 PF17782 DprA winged helix domain AHTJR_15005 PF02481 DNA recombination-mediator protein A AHTJR_15010 PF01300 Telomere recombination AHTJR_15020 PF00440 Bacterial regulatory proteins, tetR family AHTJR_15025 PF07690 Major Facilitator Superfamily AHTJR_15035 PF00255 Glutathione peroxidase AHTJR_15055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AHTJR_15060 PF02874 ATP synthase alpha/beta family, beta-barrel domain AHTJR_15060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AHTJR_15065 PF00231 ATP synthase AHTJR_15070 PF02874 ATP synthase alpha/beta family, beta-barrel domain AHTJR_15070 PF00306 ATP synthase alpha/beta chain, C terminal domain AHTJR_15070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AHTJR_15075 PF00213 ATP synthase delta (OSCP) subunit AHTJR_15080 PF00430 ATP synthase B/B' CF(0) AHTJR_15085 PF00137 ATP synthase subunit C AHTJR_15090 PF00119 ATP synthase A chain AHTJR_15110 PF00005 ABC transporter AHTJR_15115 PF00950 ABC 3 transport family AHTJR_15120 PF01810 LysE type translocator AHTJR_15125 PF04261 Dyp-type peroxidase family AHTJR_15130 PF00750 tRNA synthetases class I (R) AHTJR_15130 PF05746 DALR anticodon binding domain AHTJR_15130 PF03485 Arginyl tRNA synthetase N terminal domain AHTJR_15150 PF02678 Pirin AHTJR_15150 PF05726 Pirin C-terminal cupin domain AHTJR_15160 PF01613 Flavin reductase like domain AHTJR_15165 PF01717 Cobalamin-independent synthase, Catalytic domain AHTJR_15165 PF08267 Cobalamin-independent synthase, N-terminal domain AHTJR_15175 PF12833 Helix-turn-helix domain AHTJR_15175 PF02311 AraC-like ligand binding domain AHTJR_15180 PF00682 HMGL-like AHTJR_15180 PF08502 LeuA allosteric (dimerisation) domain AHTJR_15185 PF00958 GMP synthase C terminal domain AHTJR_15185 PF02540 NAD synthase AHTJR_15185 PF00117 Glutamine amidotransferase class-I AHTJR_15190 PF04286 Protein of unknown function (DUF445) AHTJR_15200 PF07681 DoxX AHTJR_15205 PF09335 SNARE associated Golgi protein AHTJR_15220 PF13614 AAA domain AHTJR_15230 PF01722 BolA-like protein AHTJR_15265 PF07120 Protein of unknown function (DUF1376) AHTJR_15280 PF04851 Type III restriction enzyme, res subunit AHTJR_15280 PF08774 VRR-NUC domain AHTJR_15285 PF18273 Type III R-M EcoP15I C-terminal domain AHTJR_15285 PF01555 DNA methylase AHTJR_15300 PF00176 SNF2 family N-terminal domain AHTJR_15300 PF00271 Helicase conserved C-terminal domain AHTJR_15375 PF00083 Sugar (and other) transporter AHTJR_15375 PF07690 Major Facilitator Superfamily AHTJR_15380 PF00378 Enoyl-CoA hydratase/isomerase AHTJR_15385 PF00378 Enoyl-CoA hydratase/isomerase AHTJR_15390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_15390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_15390 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_15395 PF13193 AMP-binding enzyme C-terminal domain AHTJR_15395 PF00501 AMP-binding enzyme AHTJR_15400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AHTJR_15400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AHTJR_15405 PF00171 Aldehyde dehydrogenase family AHTJR_15415 PF00324 Amino acid permease AHTJR_15420 PF01042 Endoribonuclease L-PSP AHTJR_15425 PF00842 Alanine racemase, C-terminal domain AHTJR_15425 PF01168 Alanine racemase, N-terminal domain AHTJR_15430 PF01266 FAD dependent oxidoreductase AHTJR_15435 PF01037 Lrp/AsnC ligand binding domain AHTJR_15440 PF07715 TonB-dependent Receptor Plug Domain AHTJR_15440 PF00593 TonB dependent receptor AHTJR_15455 PF00849 RNA pseudouridylate synthase AHTJR_15460 PF01113 Dihydrodipicolinate reductase, N-terminus AHTJR_15460 PF05173 Dihydrodipicolinate reductase, C-terminus AHTJR_15495 PF00694 Aconitase C-terminal domain AHTJR_15495 PF00330 Aconitase family (aconitate hydratase) AHTJR_15500 PF00285 Citrate synthase, C-terminal domain AHTJR_15510 PF00392 Bacterial regulatory proteins, gntR family AHTJR_15510 PF07729 FCD domain AHTJR_15515 PF00155 Aminotransferase class I and II AHTJR_15520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AHTJR_15520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AHTJR_15520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AHTJR_15520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AHTJR_15525 PF16363 GDP-mannose 4,6 dehydratase AHTJR_15530 PF00342 Phosphoglucose isomerase AHTJR_15535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AHTJR_15535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AHTJR_15535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AHTJR_15540 PF00483 Nucleotidyl transferase AHTJR_15545 PF02719 Polysaccharide biosynthesis protein AHTJR_15550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AHTJR_15555 PF17836 PglD N-terminal domain AHTJR_15555 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_15555 PF14602 Hexapeptide repeat of succinyl-transferase AHTJR_15560 PF02397 Bacterial sugar transferase AHTJR_15565 PF00534 Glycosyl transferases group 1 AHTJR_15565 PF13477 Glycosyl transferase 4-like AHTJR_15580 PF02350 UDP-N-acetylglucosamine 2-epimerase AHTJR_15585 PF01943 Polysaccharide biosynthesis protein AHTJR_15590 PF08666 SAF domain AHTJR_15590 PF03102 NeuB family AHTJR_15605 PF02348 Cytidylyltransferase AHTJR_15610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AHTJR_15615 PF02719 Polysaccharide biosynthesis protein AHTJR_15625 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AHTJR_15630 PF00132 Bacterial transferase hexapeptide (six repeats) AHTJR_15635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AHTJR_15635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AHTJR_15640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AHTJR_15640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AHTJR_15640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AHTJR_15645 PF02350 UDP-N-acetylglucosamine 2-epimerase AHTJR_15650 PF10531 SLBB domain AHTJR_15650 PF02563 Polysaccharide biosynthesis/export protein AHTJR_15650 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AHTJR_15655 PF01451 Low molecular weight phosphotyrosine protein phosphatase AHTJR_15660 PF13807 G-rich domain on putative tyrosine kinase AHTJR_15660 PF13614 AAA domain AHTJR_15660 PF02706 Chain length determinant protein AHTJR_15665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AHTJR_15665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AHTJR_15670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AHTJR_15670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AHTJR_15675 PF03023 Lipid II flippase MurJ AHTJR_15680 PF01510 N-acetylmuramoyl-L-alanine amidase AHTJR_15685 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AHTJR_15685 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AHTJR_15695 PF01138 3' exoribonuclease family, domain 1 AHTJR_15695 PF03725 3' exoribonuclease family, domain 2 AHTJR_15700 PF00487 Fatty acid desaturase AHTJR_15705 PF00175 Oxidoreductase NAD-binding domain AHTJR_15710 PF00440 Bacterial regulatory proteins, tetR family AHTJR_15715 PF00665 Integrase core domain AHTJR_15715 PF13936 Helix-turn-helix domain AHTJR_15720 PF08360 QacR-like protein, C-terminal region AHTJR_15720 PF00440 Bacterial regulatory proteins, tetR family AHTJR_15725 PF01323 DSBA-like thioredoxin domain AHTJR_15735 PF13419 Haloacid dehalogenase-like hydrolase AHTJR_15740 PF00106 short chain dehydrogenase AHTJR_15750 PF00583 Acetyltransferase (GNAT) family AHTJR_15750 PF00696 Amino acid kinase family AHTJR_15755 PF09084 NMT1/THI5 like AHTJR_15760 PF09084 NMT1/THI5 like AHTJR_15765 PF00296 Luciferase-like monooxygenase AHTJR_15770 PF00528 Binding-protein-dependent transport system inner membrane component AHTJR_15775 PF00005 ABC transporter AHTJR_15780 PF08362 YcdC-like protein, C-terminal region AHTJR_15780 PF00440 Bacterial regulatory proteins, tetR family AHTJR_15790 PF01048 Phosphorylase superfamily AHTJR_15800 PF06574 FAD synthetase AHTJR_15800 PF01687 Riboflavin kinase AHTJR_15805 PF06827 Zinc finger found in FPG and IleRS AHTJR_15805 PF00133 tRNA synthetases class I (I, L, M and V) AHTJR_15805 PF08264 Anticodon-binding domain of tRNA AHTJR_15810 PF01252 Signal peptidase (SPase) II AHTJR_15815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AHTJR_15855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AHTJR_15860 PF07859 alpha/beta hydrolase fold AHTJR_15880 PF03466 LysR substrate binding domain AHTJR_15880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_15885 PF01025 GrpE AHTJR_15890 PF00012 Hsp70 protein AHTJR_15895 PF12706 Beta-lactamase superfamily domain AHTJR_15925 PF13406 Transglycosylase SLT domain AHTJR_15930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AHTJR_15930 PF02222 ATP-grasp domain AHTJR_15935 PF00731 AIR carboxylase AHTJR_15950 PF08245 Mur ligase middle domain AHTJR_15950 PF01225 Mur ligase family, catalytic domain AHTJR_15950 PF02875 Mur ligase family, glutamate ligase domain AHTJR_15960 PF00106 short chain dehydrogenase AHTJR_15975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AHTJR_15975 PF02770 Acyl-CoA dehydrogenase, middle domain AHTJR_15975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AHTJR_15980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_15980 PF03466 LysR substrate binding domain AHTJR_15985 PF03741 Integral membrane protein TerC family AHTJR_15990 PF01979 Amidohydrolase family AHTJR_15995 PF00156 Phosphoribosyl transferase domain AHTJR_16005 PF10411 Disulfide bond isomerase protein N-terminus AHTJR_16005 PF13098 Thioredoxin-like domain AHTJR_16010 PF10396 GTP-binding protein TrmE N-terminus AHTJR_16010 PF01926 50S ribosome-binding GTPase AHTJR_16010 PF12631 MnmE helical domain AHTJR_16015 PF02096 60Kd inner membrane protein AHTJR_16015 PF14849 YidC periplasmic domain AHTJR_16020 PF01809 Putative membrane protein insertion efficiency factor AHTJR_16025 PF00825 Ribonuclease P AHTJR_16030 PF00468 Ribosomal protein L34 AHTJR_16055 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AHTJR_16070 PF00440 Bacterial regulatory proteins, tetR family AHTJR_16070 PF02909 Tetracyclin repressor-like, C-terminal domain AHTJR_16085 PF13610 DDE domain AHTJR_16095 PF01636 Phosphotransferase enzyme family AHTJR_16100 PF13610 DDE domain AHTJR_16110 PF02796 Helix-turn-helix domain of resolvase AHTJR_16110 PF00239 Resolvase, N terminal domain AHTJR_16125 PF01435 Peptidase family M48 AHTJR_16320 PF13361 UvrD-like helicase C-terminal domain AHTJR_16320 PF00580 UvrD/REP helicase N-terminal domain AHTJR_16360 PF17762 HTH domain found in ParB protein AHTJR_16360 PF02195 ParB-like nuclease domain AHTJR_16380 PF00437 Type II/IV secretion system protein AHTJR_16520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AHTJR_16520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AHTJR_16520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AHTJR_16520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AHTJR_16525 PF00809 Pterin binding enzyme AHTJR_16585 PF00462 Glutaredoxin AHTJR_16620 PF08240 Alcohol dehydrogenase GroES-like domain AHTJR_16620 PF00107 Zinc-binding dehydrogenase AHTJR_16635 PF02798 Glutathione S-transferase, N-terminal domain AHTJR_16635 PF00043 Glutathione S-transferase, C-terminal domain AHTJR_16640 PF01625 Peptide methionine sulfoxide reductase AHTJR_16645 PF01641 SelR domain AHTJR_16650 PF01695 IstB-like ATP binding protein AHTJR_16695 PF00717 Peptidase S24-like AHTJR_16700 PF11798 IMS family HHH motif AHTJR_16700 PF13438 Domain of unknown function (DUF4113) AHTJR_16700 PF00817 impB/mucB/samB family AHTJR_16700 PF11799 impB/mucB/samB family C-terminal domain AHTJR_16735 PF00893 Small Multidrug Resistance protein AHTJR_16740 PF00809 Pterin binding enzyme AHTJR_16785 PF00809 Pterin binding enzyme AHTJR_16845 PF01636 Phosphotransferase enzyme family AHTJR_16850 PF00665 Integrase core domain AHTJR_16850 PF13936 Helix-turn-helix domain AHTJR_16925 PF17841 BID domain of Bartonella effector protein (Bep) AHTJR_16925 PF02661 Fic/DOC family AHTJR_17015 PF00176 SNF2 family N-terminal domain AHTJR_17015 PF12137 RNA polymerase recycling family C-terminal AHTJR_17015 PF18337 RapA N-terminal Tudor like domain AHTJR_17015 PF00271 Helicase conserved C-terminal domain AHTJR_17015 PF18339 RapA N-terminal Tudor like domain 1 AHTJR_17065 PF00565 Staphylococcal nuclease homologue AHTJR_17075 PF01555 DNA methylase AHTJR_17120 PF01751 Toprim domain AHTJR_17120 PF01131 DNA topoisomerase AHTJR_17120 PF01396 Topoisomerase DNA binding C4 zinc finger AHTJR_17205 PF02899 Phage integrase, N-terminal SAM-like domain AHTJR_17205 PF00589 Phage integrase family AHTJR_17230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AHTJR_17230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AHTJR_17230 PF00378 Enoyl-CoA hydratase/isomerase AHTJR_17235 PF02803 Thiolase, C-terminal domain AHTJR_17235 PF00108 Thiolase, N-terminal domain AHTJR_17265 PF01625 Peptide methionine sulfoxide reductase AHTJR_17270 PF00462 Glutaredoxin AHTJR_17290 PF00108 Thiolase, N-terminal domain AHTJR_17290 PF02803 Thiolase, C-terminal domain AHTJR_17295 PF01625 Peptide methionine sulfoxide reductase AHTJR_17300 PF08448 PAS fold AHTJR_17300 PF00990 Diguanylate cyclase, GGDEF domain AHTJR_17350 PF08239 Bacterial SH3 domain AHTJR_17350 PF01520 N-acetylmuramoyl-L-alanine amidase AHTJR_17375 PF00905 Penicillin binding protein transpeptidase domain AHTJR_17395 PF00072 Response regulator receiver domain AHTJR_17395 PF00486 Transcriptional regulatory protein, C terminal AHTJR_17400 PF00672 HAMP domain AHTJR_17400 PF18698 Histidine kinase sensor domain AHTJR_17400 PF00989 PAS fold AHTJR_17400 PF00512 His Kinase A (phospho-acceptor) domain AHTJR_17400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AHTJR_17410 PF00873 AcrB/AcrD/AcrF family AHTJR_17415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AHTJR_17415 PF00529 HlyD membrane-fusion protein of T1SS AHTJR_17455 PF05973 Phage derived protein Gp49-like (DUF891) AHTJR_17460 PF01381 Helix-turn-helix AHTJR_17490 PF13610 DDE domain AHTJR_17495 PF03466 LysR substrate binding domain AHTJR_17495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AHTJR_17500 PF07690 Major Facilitator Superfamily AHTJR_17510 PF13610 DDE domain AHTJR_17515 PF00239 Resolvase, N terminal domain AHTJR_17515 PF02796 Helix-turn-helix domain of resolvase AHTJR_17540 PF00962 Adenosine/AMP deaminase AHTJR_17550 PF02796 Helix-turn-helix domain of resolvase AHTJR_17550 PF00665 Integrase core domain AHTJR_17555 PF01695 IstB-like ATP binding protein AHTJR_17635 PF02463 RecF/RecN/SMC N terminal domain AHTJR_17685 PF02583 Metal-sensitive transcriptional repressor