AHTJS_00005 SM00382 ATPases associated with a variety of cellular activities AHTJS_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AHTJS_00010 SM00480 DNA polymerase III beta subunit AHTJS_00020 SM00387 Histidine kinase-like ATPases AHTJS_00020 SM00433 TopoisomeraseII AHTJS_00030 SM00382 ATPases associated with a variety of cellular activities AHTJS_00205 SM00271 DnaJ molecular chaperone homology domain AHTJS_00240 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHTJS_00245 SM00829 Enoylreductase AHTJS_00265 SM00478 endonuclease III AHTJS_00265 SM00525 AHTJS_00265 AHTJS_00295 SM00382 ATPases associated with a variety of cellular activities AHTJS_00315 SM01130 AHTJS_00315 AHTJS_00325 SM00344 helix_turn_helix ASNC type AHTJS_00340 SM00382 ATPases associated with a variety of cellular activities AHTJS_00370 SM00382 ATPases associated with a variety of cellular activities AHTJS_00450 SM00450 Rhodanese Homology Domain AHTJS_00475 SM00357 Cold shock protein domain AHTJS_00490 SM00387 Histidine kinase-like ATPases AHTJS_00490 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_00495 SM00448 cheY-homologous receiver domain AHTJS_00495 SM00862 Transcriptional regulatory protein, C terminal AHTJS_00585 SM00382 ATPases associated with a variety of cellular activities AHTJS_00630 SM00267 diguanylate cyclase AHTJS_00670 SM00966 SpoVT / AbrB like domain AHTJS_00695 SM00347 helix_turn_helix multiple antibiotic resistance protein AHTJS_00730 SM00842 Cell division protein FtsA AHTJS_00735 SM00864 Tubulin/FtsZ family, GTPase domain AHTJS_00735 SM00865 Tubulin/FtsZ family, C-terminal domain AHTJS_00780 SM00849 Metallo-beta-lactamase superfamily AHTJS_00790 SM00116 Domain in cystathionine beta-synthase and other proteins. AHTJS_00790 SM01240 AHTJS_00790 AHTJS_00820 SM00937 AHTJS_00820 AHTJS_00825 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AHTJS_00865 SM00421 helix_turn_helix, Lux Regulon AHTJS_00865 SM00448 cheY-homologous receiver domain AHTJS_00880 SM00267 diguanylate cyclase AHTJS_00935 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHTJS_01000 SM00487 DEAD-like helicases superfamily AHTJS_01025 SM00477 DNA/RNA non-specific endonuclease AHTJS_01025 SM00892 DNA/RNA non-specific endonuclease AHTJS_01040 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_01135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHTJS_01135 SM00387 Histidine kinase-like ATPases AHTJS_01135 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_01140 SM00448 cheY-homologous receiver domain AHTJS_01140 SM00862 Transcriptional regulatory protein, C terminal AHTJS_01145 SM00316 Ribosomal protein S1-like RNA-binding domain AHTJS_01145 SM00732 Likely ribonuclease with RNase H fold. AHTJS_01150 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_01180 SM00422 helix_turn_helix, mercury resistance AHTJS_01190 SM00822 AHTJS_01190 AHTJS_01200 SM00382 ATPases associated with a variety of cellular activities AHTJS_01365 SM00965 Secretin and TonB N terminus short domain AHTJS_01465 SM00382 ATPases associated with a variety of cellular activities AHTJS_01490 SM00530 Helix-turn-helix XRE-family like proteins AHTJS_01575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHTJS_01575 SM00954 Region found in RelA / SpoT proteins AHTJS_01580 SM01409 AHTJS_01580 AHTJS_01585 SM00072 Guanylate kinase homologues. AHTJS_01695 SM00382 ATPases associated with a variety of cellular activities AHTJS_01865 SM00116 Domain in cystathionine beta-synthase and other proteins. AHTJS_01920 SM00861 Transketolase, pyrimidine binding domain AHTJS_01930 SM00487 DEAD-like helicases superfamily AHTJS_01930 SM00490 helicase superfamily c-terminal domain AHTJS_01935 SM00382 ATPases associated with a variety of cellular activities AHTJS_01985 SM00487 DEAD-like helicases superfamily AHTJS_01985 SM00490 helicase superfamily c-terminal domain AHTJS_02000 SM00563 Phosphate acyltransferases AHTJS_02040 SM00382 ATPases associated with a variety of cellular activities AHTJS_02055 SM01403 AHTJS_02055 AHTJS_02075 SM01382 AHTJS_02075 AHTJS_02075 SM01383 AHTJS_02075 AHTJS_02090 SM00322 K homology RNA-binding domain AHTJS_02110 SM01374 AHTJS_02110 AHTJS_02115 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AHTJS_02180 SM00363 S4 RNA-binding domain AHTJS_02180 SM01390 AHTJS_02180 AHTJS_02185 SM00662 RNA polymerases D AHTJS_02265 SM00382 ATPases associated with a variety of cellular activities AHTJS_02305 SM00316 Ribosomal protein S1-like RNA-binding domain AHTJS_02305 SM00955 AHTJS_02305 AHTJS_02365 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_02435 SM00671 Sel1-like repeats. AHTJS_02450 SM00917 LeuA allosteric (dimerisation) domain AHTJS_02460 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AHTJS_02485 SM00382 ATPases associated with a variety of cellular activities AHTJS_02485 SM00994 ClpX C4-type zinc finger AHTJS_02485 SM01086 C-terminal, D2-small domain, of ClpB protein AHTJS_02505 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_02550 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AHTJS_02550 SM00245 tail specific protease AHTJS_02575 SM00563 Phosphate acyltransferases AHTJS_02580 SM00155 Phospholipase D. Active site motifs. AHTJS_02595 SM00267 diguanylate cyclase AHTJS_02685 SM00878 Biotin carboxylase C-terminal domain AHTJS_02705 SM00960 Roadblock/LC7 domain AHTJS_02765 SM00650 Ribosomal RNA adenine dimethylases AHTJS_02780 SM00014 Acid phosphatase homologues AHTJS_02790 SM00562 AHTJS_02790 AHTJS_02800 SM00028 Tetratricopeptide repeats AHTJS_02825 SM00564 beta-propeller repeat AHTJS_02850 SM01323 AHTJS_02850 AHTJS_02885 SM00387 Histidine kinase-like ATPases AHTJS_02885 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_02900 SM00984 UDP binding domain AHTJS_02945 SM00382 ATPases associated with a variety of cellular activities AHTJS_03025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHTJS_03025 SM00387 Histidine kinase-like ATPases AHTJS_03025 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_03030 SM00448 cheY-homologous receiver domain AHTJS_03030 SM00862 Transcriptional regulatory protein, C terminal AHTJS_03100 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_03130 SM00195 Dual specificity phosphatase, catalytic domain AHTJS_03140 SM00957 SecA DEAD-like domain AHTJS_03140 SM00958 SecA preprotein cross-linking domain AHTJS_03205 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_03220 SM00564 beta-propeller repeat AHTJS_03305 SM00838 Elongation factor G C-terminus AHTJS_03325 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AHTJS_03325 SM01232 AHTJS_03325 AHTJS_03335 SM00671 Sel1-like repeats. AHTJS_03380 SM00448 cheY-homologous receiver domain AHTJS_03385 SM00448 cheY-homologous receiver domain AHTJS_03390 SM00260 Two component signalling adaptor domain AHTJS_03395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AHTJS_03400 SM00073 Histidine Phosphotransfer domain AHTJS_03400 SM00260 Two component signalling adaptor domain AHTJS_03400 SM00387 Histidine kinase-like ATPases AHTJS_03400 SM00448 cheY-homologous receiver domain AHTJS_03400 SM01231 AHTJS_03400 AHTJS_03570 SM00845 GatB domain AHTJS_03605 SM00316 Ribosomal protein S1-like RNA-binding domain AHTJS_03650 SM00387 Histidine kinase-like ATPases AHTJS_03650 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_03655 SM00448 cheY-homologous receiver domain AHTJS_03655 SM00862 Transcriptional regulatory protein, C terminal AHTJS_03665 SM00014 Acid phosphatase homologues AHTJS_03670 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHTJS_03670 SM00895 AHTJS_03670 AHTJS_03715 SM00244 prohibitin homologues AHTJS_03730 SM00563 Phosphate acyltransferases AHTJS_03750 SM00448 cheY-homologous receiver domain AHTJS_03750 SM00862 Transcriptional regulatory protein, C terminal AHTJS_03755 SM00387 Histidine kinase-like ATPases AHTJS_03755 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_03780 SM00267 diguanylate cyclase AHTJS_03780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHTJS_03790 SM00507 HNH nucleases AHTJS_03815 SM00822 AHTJS_03815 AHTJS_03850 SM00014 Acid phosphatase homologues AHTJS_03990 SM00450 Rhodanese Homology Domain AHTJS_04030 SM00861 Transketolase, pyrimidine binding domain AHTJS_04050 SM00881 CoA binding domain AHTJS_04055 SM00244 prohibitin homologues AHTJS_04110 SM00851 MGS-like domain AHTJS_04110 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AHTJS_04115 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AHTJS_04130 SM01103 AHTJS_04130 AHTJS_04140 SM00382 ATPases associated with a variety of cellular activities AHTJS_04150 SM00327 von Willebrand factor (vWF) type A domain AHTJS_04170 SM00382 ATPases associated with a variety of cellular activities AHTJS_04205 SM00116 Domain in cystathionine beta-synthase and other proteins. AHTJS_04205 SM00924 MgtE intracellular N domain AHTJS_04280 SM00382 ATPases associated with a variety of cellular activities AHTJS_04295 SM00062 Bacterial periplasmic substrate-binding proteins AHTJS_04300 SM00382 ATPases associated with a variety of cellular activities AHTJS_04320 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_04370 SM01018 B12 binding domain AHTJS_04395 SM00978 AHTJS_04395 AHTJS_04400 SM00382 ATPases associated with a variety of cellular activities AHTJS_04440 SM00893 Electron transfer flavoprotein domain AHTJS_04445 SM00893 Electron transfer flavoprotein domain AHTJS_04470 SM00382 ATPases associated with a variety of cellular activities AHTJS_04490 SM00434 DNA Topoisomerase IV AHTJS_04545 SM00382 ATPases associated with a variety of cellular activities AHTJS_04550 SM00849 Metallo-beta-lactamase superfamily AHTJS_04670 SM00382 ATPases associated with a variety of cellular activities AHTJS_04675 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AHTJS_04680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHTJS_04685 SM01211 AHTJS_04685 AHTJS_04700 SM00382 ATPases associated with a variety of cellular activities AHTJS_04820 SM00382 ATPases associated with a variety of cellular activities AHTJS_04875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AHTJS_04885 SM00838 Elongation factor G C-terminus AHTJS_04900 SM00358 Double-stranded RNA binding motif AHTJS_04900 SM00535 Ribonuclease III family AHTJS_04965 SM00487 DEAD-like helicases superfamily AHTJS_04965 SM00490 helicase superfamily c-terminal domain AHTJS_04995 SM00382 ATPases associated with a variety of cellular activities AHTJS_05025 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AHTJS_05040 SM00382 ATPases associated with a variety of cellular activities AHTJS_05115 SM01091 Transporter associated domain AHTJS_05140 SM00840 AHTJS_05140 AHTJS_05145 SM00116 Domain in cystathionine beta-synthase and other proteins. AHTJS_05165 SM00382 ATPases associated with a variety of cellular activities AHTJS_05175 SM00382 ATPases associated with a variety of cellular activities AHTJS_05195 SM00382 ATPases associated with a variety of cellular activities AHTJS_05245 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AHTJS_05245 SM00534 ATPase domain of DNA mismatch repair MUTS family AHTJS_05285 SM00421 helix_turn_helix, Lux Regulon AHTJS_05295 SM00671 Sel1-like repeats. AHTJS_05355 SM00563 Phosphate acyltransferases AHTJS_05430 SM00220 Serine/Threonine protein kinases, catalytic domain AHTJS_05455 SM00346 helix_turn_helix isocitrate lyase regulation AHTJS_05475 SM00822 AHTJS_05475 AHTJS_05560 SM00936 Penicillin-binding protein 5, C-terminal domain AHTJS_05585 SM00257 Lysin motif AHTJS_05620 SM00052 Putative diguanylate phosphodiesterase AHTJS_05635 SM00841 Elongation factor P, C-terminal AHTJS_05635 SM01185 AHTJS_05635 AHTJS_05660 SM00460 Transglutaminase/protease-like homologues AHTJS_05695 SM00857 Resolvase, N terminal domain AHTJS_05715 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_05785 SM00857 Resolvase, N terminal domain AHTJS_05835 SM00382 ATPases associated with a variety of cellular activities AHTJS_05870 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHTJS_05870 SM00091 PAS domain AHTJS_05870 SM00382 ATPases associated with a variety of cellular activities AHTJS_05885 SM00729 Elongator protein 3, MiaB family, Radical SAM AHTJS_05950 SM01116 AHTJS_05950 AHTJS_05960 SM00331 Sigma factor PP2C-like phosphatases AHTJS_05960 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AHTJS_06050 SM00382 ATPases associated with a variety of cellular activities AHTJS_06125 SM00671 Sel1-like repeats. AHTJS_06160 SM00833 Cobalamin synthesis protein cobW C-terminal domain AHTJS_06165 SM00346 helix_turn_helix isocitrate lyase regulation AHTJS_06170 SM00882 Coenzyme A transferase AHTJS_06175 SM00882 Coenzyme A transferase AHTJS_06185 SM00998 Adenylosuccinate lyase C-terminus AHTJS_06220 SM00710 Parallel beta-helix repeats AHTJS_06230 SM00564 beta-propeller repeat AHTJS_06255 SM00530 Helix-turn-helix XRE-family like proteins AHTJS_06270 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHTJS_06270 SM00895 AHTJS_06270 AHTJS_06310 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHTJS_06310 SM00866 AHTJS_06310 AHTJS_06340 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AHTJS_06355 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_06360 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHTJS_06425 SM00387 Histidine kinase-like ATPases AHTJS_06425 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_06430 SM00448 cheY-homologous receiver domain AHTJS_06430 SM00862 Transcriptional regulatory protein, C terminal AHTJS_06485 SM00796 Allophanate hydrolase subunit 1 AHTJS_06485 SM00797 Allophanate hydrolase subunit 2 AHTJS_06490 SM00878 Biotin carboxylase C-terminal domain AHTJS_06500 SM00100 Cyclic nucleotide-monophosphate binding domain AHTJS_06500 SM00419 helix_turn_helix, cAMP Regulatory protein AHTJS_06515 SM00382 ATPases associated with a variety of cellular activities AHTJS_06515 SM01086 C-terminal, D2-small domain, of ClpB protein AHTJS_06525 SM00981 AHTJS_06525 AHTJS_06555 SM00382 ATPases associated with a variety of cellular activities AHTJS_06650 SM00487 DEAD-like helicases superfamily AHTJS_06650 SM00490 helicase superfamily c-terminal domain AHTJS_06650 SM00982 AHTJS_06650 AHTJS_06650 SM01058 CarD-like/TRCF domain AHTJS_06660 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AHTJS_06675 SM00271 DnaJ molecular chaperone homology domain AHTJS_06710 SM00411 bacterial (prokaryotic) histone like domain AHTJS_06735 SM00382 ATPases associated with a variety of cellular activities AHTJS_06740 SM00363 S4 RNA-binding domain AHTJS_06760 SM00458 Ricin-type beta-trefoil AHTJS_06800 SM00822 AHTJS_06800 AHTJS_06830 SM00382 ATPases associated with a variety of cellular activities AHTJS_06905 SM00855 Phosphoglycerate mutase family AHTJS_06995 SM00861 Transketolase, pyrimidine binding domain AHTJS_07010 SM00867 YceI-like domain AHTJS_07055 SM00344 helix_turn_helix ASNC type AHTJS_07070 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_07080 SM00382 ATPases associated with a variety of cellular activities AHTJS_07115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AHTJS_07135 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AHTJS_07140 SM00382 ATPases associated with a variety of cellular activities AHTJS_07155 SM00226 Low molecular weight phosphatase family AHTJS_07200 SM00878 Biotin carboxylase C-terminal domain AHTJS_07220 SM00448 cheY-homologous receiver domain AHTJS_07220 SM01012 AHTJS_07220 AHTJS_07240 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AHTJS_07265 SM00382 ATPases associated with a variety of cellular activities AHTJS_07280 SM00729 Elongator protein 3, MiaB family, Radical SAM AHTJS_07295 SM00852 Probable molybdopterin binding domain AHTJS_07300 SM00852 Probable molybdopterin binding domain AHTJS_07310 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHTJS_07385 SM00382 ATPases associated with a variety of cellular activities AHTJS_07385 SM00448 cheY-homologous receiver domain AHTJS_07390 SM00091 PAS domain AHTJS_07390 SM00387 Histidine kinase-like ATPases AHTJS_07390 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_07395 SM00729 Elongator protein 3, MiaB family, Radical SAM AHTJS_07425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AHTJS_07435 SM00935 Outer membrane protein (OmpH-like) AHTJS_07455 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_07510 SM01006 Siderophore biosynthesis protein domain AHTJS_07555 SM00855 Phosphoglycerate mutase family AHTJS_07645 SM01324 AHTJS_07645 AHTJS_07695 SM00493 AHTJS_07695 AHTJS_07700 SM00341 Helicase and RNase D C-terminal AHTJS_07700 SM00474 3'-5' exonuclease AHTJS_07715 SM00382 ATPases associated with a variety of cellular activities AHTJS_07735 SM00267 diguanylate cyclase AHTJS_07750 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_07785 SM00382 ATPases associated with a variety of cellular activities AHTJS_07890 SM00530 Helix-turn-helix XRE-family like proteins AHTJS_07920 SM00882 Coenzyme A transferase AHTJS_07925 SM00882 Coenzyme A transferase AHTJS_07975 SM00878 Biotin carboxylase C-terminal domain AHTJS_08035 SM00965 Secretin and TonB N terminus short domain AHTJS_08055 SM00382 ATPases associated with a variety of cellular activities AHTJS_08070 SM00796 Allophanate hydrolase subunit 1 AHTJS_08070 SM00797 Allophanate hydrolase subunit 2 AHTJS_08070 SM00878 Biotin carboxylase C-terminal domain AHTJS_08085 SM00344 helix_turn_helix ASNC type AHTJS_08095 SM00822 AHTJS_08095 AHTJS_08165 SM00829 Enoylreductase AHTJS_08180 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHTJS_08180 SM00895 AHTJS_08180 AHTJS_08185 SM00796 Allophanate hydrolase subunit 1 AHTJS_08185 SM00797 Allophanate hydrolase subunit 2 AHTJS_08185 SM00878 Biotin carboxylase C-terminal domain AHTJS_08205 SM00155 Phospholipase D. Active site motifs. AHTJS_08220 SM00855 Phosphoglycerate mutase family AHTJS_08225 SM00849 Metallo-beta-lactamase superfamily AHTJS_08250 SM00382 ATPases associated with a variety of cellular activities AHTJS_08255 SM00953 AHTJS_08255 AHTJS_08275 SM01192 AHTJS_08275 AHTJS_08275 SM01193 AHTJS_08275 AHTJS_08335 SM00382 ATPases associated with a variety of cellular activities AHTJS_08335 SM01086 C-terminal, D2-small domain, of ClpB protein AHTJS_08365 SM00098 Alkaline phosphatase homologues AHTJS_08410 SM01264 AHTJS_08410 AHTJS_08470 SM00382 ATPases associated with a variety of cellular activities AHTJS_08470 SM00962 SRP54-type protein, GTPase domain AHTJS_08470 SM00963 SRP54-type protein, helical bundle domain AHTJS_08495 SM00116 Domain in cystathionine beta-synthase and other proteins. AHTJS_08545 SM00347 helix_turn_helix multiple antibiotic resistance protein AHTJS_08570 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_08600 SM00382 ATPases associated with a variety of cellular activities AHTJS_08615 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AHTJS_08625 SM00411 bacterial (prokaryotic) histone like domain AHTJS_08630 SM00316 Ribosomal protein S1-like RNA-binding domain AHTJS_08655 SM00986 Uracil DNA glycosylase superfamily AHTJS_08655 SM00987 UreE urease accessory protein, C-terminal domain AHTJS_08735 SM00470 ParB-like nuclease domain AHTJS_08775 SM00487 DEAD-like helicases superfamily AHTJS_08775 SM00490 helicase superfamily c-terminal domain AHTJS_08780 SM00357 Cold shock protein domain AHTJS_08840 SM00530 Helix-turn-helix XRE-family like proteins AHTJS_08880 SM00382 ATPases associated with a variety of cellular activities AHTJS_08905 SM00100 Cyclic nucleotide-monophosphate binding domain AHTJS_08905 SM00419 helix_turn_helix, cAMP Regulatory protein AHTJS_08930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AHTJS_08945 SM00344 helix_turn_helix ASNC type AHTJS_08975 SM00870 AHTJS_08975 AHTJS_08980 SM00481 DNA polymerase alpha chain like domain AHTJS_09015 SM00382 ATPases associated with a variety of cellular activities AHTJS_09045 SM00357 Cold shock protein domain AHTJS_09050 SM00357 Cold shock protein domain AHTJS_09080 SM00729 Elongator protein 3, MiaB family, Radical SAM AHTJS_09080 SM00876 Biotin and Thiamin Synthesis associated domain AHTJS_09150 SM00563 Phosphate acyltransferases AHTJS_09160 SM00344 helix_turn_helix ASNC type AHTJS_09170 SM00830 Chorismate mutase type II AHTJS_09270 SM00387 Histidine kinase-like ATPases AHTJS_09270 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_09275 SM00448 cheY-homologous receiver domain AHTJS_09275 SM00862 Transcriptional regulatory protein, C terminal AHTJS_09285 SM00382 ATPases associated with a variety of cellular activities AHTJS_09305 SM01236 AHTJS_09305 AHTJS_09350 SM00382 ATPases associated with a variety of cellular activities AHTJS_09380 SM00382 ATPases associated with a variety of cellular activities AHTJS_09445 SM00905 Dihydroneopterin aldolase AHTJS_09470 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_09480 SM00822 AHTJS_09480 AHTJS_09485 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_09500 SM00937 AHTJS_09500 AHTJS_09515 SM00479 AHTJS_09515 AHTJS_09530 SM00382 ATPases associated with a variety of cellular activities AHTJS_09580 SM00729 Elongator protein 3, MiaB family, Radical SAM AHTJS_09595 SM00382 ATPases associated with a variety of cellular activities AHTJS_09595 SM00487 DEAD-like helicases superfamily AHTJS_09595 SM00490 helicase superfamily c-terminal domain AHTJS_09595 SM00847 Helicase associated domain (HA2) Add an annotation AHTJS_09620 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_09670 SM00382 ATPases associated with a variety of cellular activities AHTJS_09730 SM00853 MutL C terminal dimerisation domain AHTJS_09730 SM01340 AHTJS_09730 AHTJS_09755 SM00363 S4 RNA-binding domain AHTJS_09770 SM00052 Putative diguanylate phosphodiesterase AHTJS_09770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHTJS_09770 SM00091 PAS domain AHTJS_09770 SM00267 diguanylate cyclase AHTJS_09855 SM01005 Alanine racemase, C-terminal domain AHTJS_09860 SM01034 Sensors of blue-light using FAD AHTJS_09870 SM00460 Transglutaminase/protease-like homologues AHTJS_09890 SM00788 Adenylosuccinate synthetase AHTJS_09905 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AHTJS_09910 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AHTJS_09965 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_09975 SM00382 ATPases associated with a variety of cellular activities AHTJS_10015 SM01228 AHTJS_10015 AHTJS_10040 SM00798 AICARFT/IMPCHase bienzyme AHTJS_10040 SM00851 MGS-like domain AHTJS_10045 SM01209 AHTJS_10045 AHTJS_10045 SM01210 AHTJS_10045 AHTJS_10055 SM00382 ATPases associated with a variety of cellular activities AHTJS_10055 SM00930 AHTJS_10055 AHTJS_10075 SM00849 Metallo-beta-lactamase superfamily AHTJS_10085 SM00996 S-adenosyl-L-homocysteine hydrolase AHTJS_10085 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AHTJS_10100 SM00052 Putative diguanylate phosphodiesterase AHTJS_10100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AHTJS_10100 SM00091 PAS domain AHTJS_10100 SM00267 diguanylate cyclase AHTJS_10105 SM00919 Malic enzyme, NAD binding domain AHTJS_10105 SM01274 AHTJS_10105 AHTJS_10200 SM01230 AHTJS_10200 AHTJS_10405 SM00382 ATPases associated with a variety of cellular activities AHTJS_10435 SM00990 AHTJS_10435 AHTJS_10505 SM00530 Helix-turn-helix XRE-family like proteins AHTJS_10525 SM00479 AHTJS_10525 AHTJS_10575 SM00463 Small MutS-related domain AHTJS_10615 SM00267 diguanylate cyclase AHTJS_10625 SM00479 AHTJS_10625 AHTJS_10645 SM00382 ATPases associated with a variety of cellular activities AHTJS_10715 SM00382 ATPases associated with a variety of cellular activities AHTJS_10735 SM00257 Lysin motif AHTJS_10740 SM00479 AHTJS_10740 AHTJS_10805 SM01011 Aminopeptidase P, N-terminal domain AHTJS_10835 SM00746 metallochaperone-like domain AHTJS_10840 SM00422 helix_turn_helix, mercury resistance AHTJS_10855 SM00382 ATPases associated with a variety of cellular activities AHTJS_10855 SM00464 Found in ATP-dependent protease La (LON) AHTJS_10875 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AHTJS_10915 SM00478 endonuclease III AHTJS_10975 SM00382 ATPases associated with a variety of cellular activities AHTJS_11050 SM00487 DEAD-like helicases superfamily AHTJS_11050 SM00490 helicase superfamily c-terminal domain AHTJS_11080 SM00880 AHTJS_11080 AHTJS_11080 SM01118 AHTJS_11080 AHTJS_11120 SM00382 ATPases associated with a variety of cellular activities AHTJS_11130 SM01329 AHTJS_11130 AHTJS_11145 SM00095 Transthyretin AHTJS_11150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AHTJS_11255 SM00382 ATPases associated with a variety of cellular activities AHTJS_11270 SM00947 Carbonic anhydrase AHTJS_11345 SM00487 DEAD-like helicases superfamily AHTJS_11390 SM00849 Metallo-beta-lactamase superfamily AHTJS_11455 SM00883 Chaperonin 10 Kd subunit AHTJS_11465 SM00046 Diacylglycerol kinase catalytic domain (presumed) AHTJS_11490 SM00382 ATPases associated with a variety of cellular activities AHTJS_11500 SM00912 haemagglutination activity domain AHTJS_11520 SM00420 helix_turn_helix, Deoxyribose operon repressor AHTJS_11520 SM01134 AHTJS_11520 AHTJS_11580 SM01322 AHTJS_11580 AHTJS_11610 SM00347 helix_turn_helix multiple antibiotic resistance protein AHTJS_11660 SM00346 helix_turn_helix isocitrate lyase regulation AHTJS_11675 SM00919 Malic enzyme, NAD binding domain AHTJS_11675 SM01274 AHTJS_11675 AHTJS_11710 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AHTJS_11715 SM00344 helix_turn_helix ASNC type AHTJS_11790 SM01004 Delta-aminolevulinic acid dehydratase AHTJS_11840 SM00382 ATPases associated with a variety of cellular activities AHTJS_11845 SM00382 ATPases associated with a variety of cellular activities AHTJS_11910 SM00563 Phosphate acyltransferases AHTJS_11945 SM00843 AHTJS_11945 AHTJS_11985 SM00838 Elongation factor G C-terminus AHTJS_11985 SM00889 Elongation factor G, domain IV AHTJS_12005 SM00825 Beta-ketoacyl synthase AHTJS_12080 SM00363 S4 RNA-binding domain AHTJS_12090 SM00400 zinc finger AHTJS_12090 SM00493 AHTJS_12090 AHTJS_12105 SM00028 Tetratricopeptide repeats AHTJS_12140 SM01400 AHTJS_12140 AHTJS_12160 SM00100 Cyclic nucleotide-monophosphate binding domain AHTJS_12195 SM00257 Lysin motif AHTJS_12210 SM00822 AHTJS_12210 AHTJS_12215 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AHTJS_12260 SM00363 S4 RNA-binding domain AHTJS_12315 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AHTJS_12315 SM00292 breast cancer carboxy-terminal domain AHTJS_12315 SM00532 Ligase N family AHTJS_12320 SM00771 ZipA, C-terminal domain (FtsZ-binding) AHTJS_12330 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHTJS_12355 SM00382 ATPases associated with a variety of cellular activities AHTJS_12355 SM00962 SRP54-type protein, GTPase domain AHTJS_12355 SM00963 SRP54-type protein, helical bundle domain AHTJS_12445 SM00849 Metallo-beta-lactamase superfamily AHTJS_12490 SM00382 ATPases associated with a variety of cellular activities AHTJS_12520 SM00357 Cold shock protein domain AHTJS_12565 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AHTJS_12565 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AHTJS_12570 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AHTJS_12595 SM00267 diguanylate cyclase AHTJS_12605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHTJS_12605 SM00387 Histidine kinase-like ATPases AHTJS_12605 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_12610 SM00448 cheY-homologous receiver domain AHTJS_12610 SM00862 Transcriptional regulatory protein, C terminal AHTJS_12670 SM00346 helix_turn_helix isocitrate lyase regulation AHTJS_12725 SM00382 ATPases associated with a variety of cellular activities AHTJS_12980 SM00331 Sigma factor PP2C-like phosphatases AHTJS_13005 SM00382 ATPases associated with a variety of cellular activities AHTJS_13025 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AHTJS_13025 SM00474 3'-5' exonuclease AHTJS_13025 SM00475 5'-3' exonuclease AHTJS_13025 SM00482 DNA polymerase A domain AHTJS_13040 SM00977 TilS substrate C-terminal domain AHTJS_13060 SM00357 Cold shock protein domain AHTJS_13060 SM00382 ATPases associated with a variety of cellular activities AHTJS_13060 SM00959 Rho termination factor, N-terminal domain AHTJS_13070 SM00411 bacterial (prokaryotic) histone like domain AHTJS_13075 SM00873 B3/4 domain AHTJS_13075 SM00874 tRNA synthetase B5 domain AHTJS_13075 SM00896 Ferredoxin-fold anticodon binding domain AHTJS_13150 SM00382 ATPases associated with a variety of cellular activities AHTJS_13170 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AHTJS_13215 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AHTJS_13235 SM00954 Region found in RelA / SpoT proteins AHTJS_13255 SM00073 Histidine Phosphotransfer domain AHTJS_13255 SM00387 Histidine kinase-like ATPases AHTJS_13255 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_13255 SM00448 cheY-homologous receiver domain AHTJS_13300 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AHTJS_13300 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AHTJS_13310 SM00422 helix_turn_helix, mercury resistance AHTJS_13345 SM00347 helix_turn_helix multiple antibiotic resistance protein AHTJS_13360 SM00226 Low molecular weight phosphatase family AHTJS_13365 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AHTJS_13430 SM00226 Low molecular weight phosphatase family AHTJS_13435 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AHTJS_13455 SM00899 AHTJS_13455 AHTJS_13465 SM00422 helix_turn_helix, mercury resistance AHTJS_13485 SM00448 cheY-homologous receiver domain AHTJS_13485 SM00862 Transcriptional regulatory protein, C terminal AHTJS_13490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AHTJS_13490 SM00387 Histidine kinase-like ATPases AHTJS_13490 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_13495 SM00746 metallochaperone-like domain AHTJS_13575 SM00382 ATPases associated with a variety of cellular activities AHTJS_13725 SM00829 Enoylreductase AHTJS_13735 SM00829 Enoylreductase AHTJS_13740 SM00829 Enoylreductase AHTJS_13750 SM00822 AHTJS_13750 AHTJS_13755 SM00829 Enoylreductase AHTJS_13805 SM00052 Putative diguanylate phosphodiesterase AHTJS_13805 SM00267 diguanylate cyclase AHTJS_13850 SM00382 ATPases associated with a variety of cellular activities AHTJS_13880 SM00479 AHTJS_13880 AHTJS_13890 SM00450 Rhodanese Homology Domain AHTJS_13920 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_13945 SM00481 DNA polymerase alpha chain like domain AHTJS_13970 SM00450 Rhodanese Homology Domain AHTJS_13985 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHTJS_14010 SM00634 Bacterial Ig-like domain (group 1) AHTJS_14055 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AHTJS_14085 SM00729 Elongator protein 3, MiaB family, Radical SAM AHTJS_14220 SM00360 RNA recognition motif AHTJS_14240 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AHTJS_14240 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AHTJS_14240 SM00493 AHTJS_14240 AHTJS_14260 SM00382 ATPases associated with a variety of cellular activities AHTJS_14280 SM00859 Semialdehyde dehydrogenase, NAD binding domain AHTJS_14295 SM00870 AHTJS_14295 AHTJS_14305 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_14310 SM00316 Ribosomal protein S1-like RNA-binding domain AHTJS_14320 SM01329 AHTJS_14320 AHTJS_14360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AHTJS_14405 SM00363 S4 RNA-binding domain AHTJS_14415 SM00316 Ribosomal protein S1-like RNA-binding domain AHTJS_14435 SM00729 Elongator protein 3, MiaB family, Radical SAM AHTJS_14485 SM00903 Flavin reductase like domain AHTJS_14520 SM00729 Elongator protein 3, MiaB family, Radical SAM AHTJS_14550 SM00382 ATPases associated with a variety of cellular activities AHTJS_14565 SM00849 Metallo-beta-lactamase superfamily AHTJS_14605 SM00116 Domain in cystathionine beta-synthase and other proteins. AHTJS_14605 SM01091 Transporter associated domain AHTJS_14630 SM00487 DEAD-like helicases superfamily AHTJS_14630 SM00490 helicase superfamily c-terminal domain AHTJS_14650 SM00271 DnaJ molecular chaperone homology domain AHTJS_14665 SM00316 Ribosomal protein S1-like RNA-binding domain AHTJS_14665 SM00322 K homology RNA-binding domain AHTJS_14670 SM01387 AHTJS_14670 AHTJS_14815 SM00316 Ribosomal protein S1-like RNA-binding domain AHTJS_14880 SM00967 RNA 2'-O ribose methyltransferase substrate binding AHTJS_14900 SM00732 Likely ribonuclease with RNase H fold. AHTJS_14920 SM00346 helix_turn_helix isocitrate lyase regulation AHTJS_14935 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AHTJS_14935 SM00465 GIY-YIG type nucleases (URI domain) AHTJS_14980 SM00382 ATPases associated with a variety of cellular activities AHTJS_15015 SM00387 Histidine kinase-like ATPases AHTJS_15055 SM00663 RNA polymerase I subunit A N-terminus AHTJS_15080 SM00649 Ribosomal protein L11/L12 AHTJS_15085 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AHTJS_15085 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AHTJS_15135 SM00240 Forkhead associated domain AHTJS_15155 SM00528 Domain in histone-like proteins of HNS family AHTJS_15185 SM00448 cheY-homologous receiver domain AHTJS_15185 SM00850 LytTr DNA-binding domain AHTJS_15270 SM00899 AHTJS_15270 AHTJS_15300 SM00421 helix_turn_helix, Lux Regulon AHTJS_15300 SM00448 cheY-homologous receiver domain AHTJS_15305 SM00387 Histidine kinase-like ATPases AHTJS_15305 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_15310 SM00382 ATPases associated with a variety of cellular activities AHTJS_15310 SM00448 cheY-homologous receiver domain AHTJS_15325 SM00245 tail specific protease AHTJS_15395 SM00938 Nitrogen regulatory protein P-II AHTJS_15425 SM00448 cheY-homologous receiver domain AHTJS_15425 SM00862 Transcriptional regulatory protein, C terminal AHTJS_15430 SM00387 Histidine kinase-like ATPases AHTJS_15430 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_15440 SM00822 AHTJS_15440 AHTJS_15460 SM00829 Enoylreductase AHTJS_15495 SM00382 ATPases associated with a variety of cellular activities AHTJS_15510 SM00382 ATPases associated with a variety of cellular activities AHTJS_15550 SM00530 Helix-turn-helix XRE-family like proteins AHTJS_15590 SM00382 ATPases associated with a variety of cellular activities AHTJS_15645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AHTJS_15655 SM00422 helix_turn_helix, mercury resistance AHTJS_15750 SM00434 DNA Topoisomerase IV AHTJS_15770 SM01091 Transporter associated domain AHTJS_15790 SM00641 Glycosyl hydrolases family 25 AHTJS_15810 SM00729 Elongator protein 3, MiaB family, Radical SAM AHTJS_15885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AHTJS_15915 SM00387 Histidine kinase-like ATPases AHTJS_15915 SM00388 His Kinase A (phosphoacceptor) domain AHTJS_15915 SM00448 cheY-homologous receiver domain AHTJS_15970 SM00342 helix_turn_helix, arabinose operon control protein AHTJS_16000 SM00382 ATPases associated with a variety of cellular activities AHTJS_16050 SM00382 ATPases associated with a variety of cellular activities AHTJS_16070 SM00836 DALR anticodon binding domain AHTJS_16070 SM01016 Arginyl tRNA synthetase N terminal dom AHTJS_16090 SM00382 ATPases associated with a variety of cellular activities AHTJS_16125 SM00903 Flavin reductase like domain AHTJS_16270 SM01005 Alanine racemase, C-terminal domain AHTJS_16280 SM00344 helix_turn_helix ASNC type AHTJS_16335 SM00345 helix_turn_helix gluconate operon transcriptional repressor AHTJS_16335 SM00895 AHTJS_16335 AHTJS_16365 SM00984 UDP binding domain AHTJS_16435 SM00984 UDP binding domain AHTJS_16460 SM00226 Low molecular weight phosphatase family AHTJS_16485 SM00644 AHTJS_16485 AHTJS_16555 SM00062 Bacterial periplasmic substrate-binding proteins AHTJS_16560 SM00062 Bacterial periplasmic substrate-binding proteins AHTJS_16575 SM00382 ATPases associated with a variety of cellular activities AHTJS_16625 SM00904 Riboflavin kinase AHTJS_16710 SM00849 Metallo-beta-lactamase superfamily AHTJS_16730 SM00849 Metallo-beta-lactamase superfamily AHTJS_16740 SM00235 Zinc-dependent metalloprotease AHTJS_16745 SM00235 Zinc-dependent metalloprotease AHTJS_16765 SM01001 AIR carboxylase AHTJS_16790 SM00855 Phosphoglycerate mutase family AHTJS_16855 SM01040 BRO family, N-terminal domain AHTJS_16890 SM01234 AHTJS_16890 AHTJS_16940 SM00530 Helix-turn-helix XRE-family like proteins AHTJS_16995 SM00382 ATPases associated with a variety of cellular activities AHTJS_17030 SM00382 ATPases associated with a variety of cellular activities AHTJS_17150 SM00382 ATPases associated with a variety of cellular activities AHTJS_17315 SM00972 Spore Coat Protein U domain AHTJS_17330 SM00972 Spore Coat Protein U domain AHTJS_17340 SM00972 Spore Coat Protein U domain AHTJS_17415 SM00857 Resolvase, N terminal domain