locus-tag class description LIS44_00005 IPR003593 AAA+ ATPase domain LIS44_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_00005 IPR038454 DnaA, N-terminal domain superfamily LIS44_00005 IPR024633 DnaA N-terminal domain LIS44_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal LIS44_00005 IPR010921 Trp repressor/replication initiator LIS44_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site LIS44_00005 IPR020591 Chromosomal replication control, initiator DnaA-like LIS44_00005 IPR001957 Chromosomal replication control, initiator DnaA LIS44_00005 IPR013317 Chromosomal replication initiator protein DnaA LIS44_00015 IPR001238 DNA-binding, RecF LIS44_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_00015 IPR003395 RecF/RecN/SMC, N-terminal LIS44_00015 IPR042174 DNA-binding RecF, domain 2 LIS44_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LIS44_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain LIS44_00020 IPR018522 DNA topoisomerase, type IIA, conserved site LIS44_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 LIS44_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal LIS44_00020 IPR001241 DNA topoisomerase, type IIA LIS44_00020 IPR006171 TOPRIM domain LIS44_00020 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_00020 IPR002288 DNA gyrase B subunit, C-terminal LIS44_00020 IPR011557 DNA gyrase, subunit B LIS44_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_00020 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_00020 IPR041423 DNA gyrase subunit B insert domain LIS44_00035 IPR005904 Hypoxanthine phosphoribosyl transferase LIS44_00035 IPR029057 Phosphoribosyltransferase-like LIS44_00035 IPR000836 Phosphoribosyltransferase domain LIS44_00040 IPR006680 Amidohydrolase-related LIS44_00040 IPR014311 Guanine deaminase LIS44_00040 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIS44_00040 IPR032466 Metal-dependent hydrolase LIS44_00055 IPR020843 Polyketide synthase, enoylreductase domain LIS44_00055 IPR011032 GroES-like superfamily LIS44_00055 IPR036291 NAD(P)-binding domain superfamily LIS44_00055 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LIS44_00055 IPR013149 Alcohol dehydrogenase, C-terminal LIS44_00055 IPR013154 Alcohol dehydrogenase, N-terminal LIS44_00060 IPR005757 Murein peptide ligase LIS44_00060 IPR036565 Mur-like, catalytic domain superfamily LIS44_00060 IPR004101 Mur ligase, C-terminal LIS44_00060 IPR036615 Mur ligase, C-terminal domain superfamily LIS44_00060 IPR013221 Mur ligase, central LIS44_00060 IPR000713 Mur ligase, N-terminal catalytic domain LIS44_00070 IPR033747 Class I PurE LIS44_00070 IPR000031 PurE domain LIS44_00070 IPR024694 PurE, prokaryotic type LIS44_00070 IPR035893 PurE domain superfamily LIS44_00080 IPR011757 Lytic transglycosylase MltB LIS44_00080 IPR023346 Lysozyme-like domain superfamily LIS44_00080 IPR031304 Transglycosylase SLT domain 2 LIS44_00085 IPR005338 Anhydro-N-acetylmuramic acid kinase LIS44_00090 IPR002307 Tyrosine-tRNA ligase LIS44_00090 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIS44_00090 IPR002305 Aminoacyl-tRNA synthetase, class Ic LIS44_00090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_00090 IPR002942 RNA-binding S4 domain LIS44_00090 IPR036986 RNA-binding S4 domain superfamily LIS44_00090 IPR024088 Tyrosine-tRNA ligase, bacterial-type LIS44_00090 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 LIS44_00130 IPR005829 Sugar transporter, conserved site LIS44_00130 IPR036259 MFS transporter superfamily LIS44_00130 IPR020846 Major facilitator superfamily domain LIS44_00130 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family LIS44_00130 IPR011701 Major facilitator superfamily LIS44_00150 IPR002110 Ankyrin repeat LIS44_00150 IPR020683 Ankyrin repeat-containing domain LIS44_00150 IPR036770 Ankyrin repeat-containing domain superfamily LIS44_00155 IPR004291 Transposase, IS66 LIS44_00155 IPR024463 Transposase TnpC, homeodomain LIS44_00155 IPR039552 Transposase IS66, C-terminal LIS44_00155 IPR024474 Zinc-finger binding domain of transposase IS66 LIS44_00155 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_00165 IPR009057 Homeobox-like domain superfamily LIS44_00170 IPR011042 Six-bladed beta-propeller, TolB-like LIS44_00170 IPR012938 Glucose/Sorbosone dehydrogenase LIS44_00170 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase LIS44_00180 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LIS44_00185 IPR001872 Peptidase A8, signal peptidase II LIS44_00190 IPR023585 Isoleucine-tRNA ligase, type 1 LIS44_00190 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LIS44_00190 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain LIS44_00190 IPR002300 Aminoacyl-tRNA synthetase, class Ia LIS44_00190 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIS44_00190 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LIS44_00190 IPR010663 Zinc finger, FPG/IleRS-type LIS44_00190 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIS44_00190 IPR002301 Isoleucine-tRNA ligase LIS44_00190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_00195 IPR023468 Riboflavin kinase LIS44_00195 IPR002606 Riboflavin kinase, bacterial LIS44_00195 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic LIS44_00195 IPR023465 Riboflavin kinase domain superfamily LIS44_00195 IPR015864 FAD synthetase LIS44_00195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_00205 IPR001647 DNA-binding HTH domain, TetR-type LIS44_00205 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIS44_00205 IPR019915 Transcription regulator, pyrimidine utilisation, RutR LIS44_00205 IPR013573 Transcription regulator YcdC, C-terminal LIS44_00205 IPR009057 Homeobox-like domain superfamily LIS44_00215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_00215 IPR035906 MetI-like superfamily LIS44_00220 IPR011251 Luciferase-like domain LIS44_00220 IPR036661 Luciferase-like domain superfamily LIS44_00220 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent LIS44_00225 IPR010067 Aliphatic sulfonates-binding protein LIS44_00225 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LIS44_00225 IPR015168 SsuA/THI5-like LIS44_00235 IPR010167 Amino-acid N-acetyltransferase LIS44_00235 IPR036393 Acetylglutamate kinase-like superfamily LIS44_00235 IPR016181 Acyl-CoA N-acyltransferase LIS44_00235 IPR001048 Aspartate/glutamate/uridylate kinase LIS44_00235 IPR000182 GNAT domain LIS44_00235 IPR033719 N-acetylglutamate synthase, kinase-like domain LIS44_00255 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_00255 IPR036291 NAD(P)-binding domain superfamily LIS44_00255 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_00260 IPR036412 HAD-like superfamily LIS44_00260 IPR006439 HAD hydrolase, subfamily IA LIS44_00260 IPR041492 Haloacid dehalogenase-like hydrolase LIS44_00260 IPR023214 HAD superfamily LIS44_00260 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIS44_00260 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic LIS44_00265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_00265 IPR010233 Ubiquinone biosynthesis O-methyltransferase LIS44_00270 IPR036249 Thioredoxin-like superfamily LIS44_00270 IPR001853 DSBA-like thioredoxin domain LIS44_00270 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL LIS44_00270 IPR017937 Thioredoxin, conserved site LIS44_00270 IPR013766 Thioredoxin domain LIS44_00275 IPR009057 Homeobox-like domain superfamily LIS44_00275 IPR001647 DNA-binding HTH domain, TetR-type LIS44_00275 IPR023764 Transcriptional repressor HTH, FabR LIS44_00280 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIS44_00280 IPR036010 2Fe-2S ferredoxin-like superfamily LIS44_00280 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LIS44_00280 IPR012675 Beta-grasp domain superfamily LIS44_00280 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LIS44_00280 IPR017927 FAD-binding domain, ferredoxin reductase-type LIS44_00280 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIS44_00280 IPR017938 Riboflavin synthase-like beta-barrel LIS44_00280 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIS44_00285 IPR005804 Fatty acid desaturase domain LIS44_00290 IPR001247 Exoribonuclease, phosphorolytic domain 1 LIS44_00290 IPR036345 Exoribonuclease, PH domain 2 superfamily LIS44_00290 IPR027408 PNPase/RNase PH domain superfamily LIS44_00290 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_00290 IPR002381 Ribonuclease PH, bacterial-type LIS44_00290 IPR018336 Ribonuclease PH, conserved site LIS44_00290 IPR015847 Exoribonuclease, phosphorolytic domain 2 LIS44_00295 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal LIS44_00295 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal LIS44_00295 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal LIS44_00295 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD LIS44_00295 IPR004393 Nicotinate-nucleotide pyrophosphorylase LIS44_00295 IPR013785 Aldolase-type TIM barrel LIS44_00295 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily LIS44_00305 IPR004268 Peptidoglycan biosynthesis protein MurJ LIS44_00325 IPR009760 Protein of unknown function DUF1328 LIS44_00330 IPR005358 Putative zinc- or iron-chelating domain containing protein LIS44_00330 IPR008228 Uncharacterised conserved protein UCP006173 LIS44_00335 IPR003593 AAA+ ATPase domain LIS44_00335 IPR032423 AAA C-terminal domain LIS44_00335 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LIS44_00335 IPR021886 MgsA AAA+ ATPase C-terminal LIS44_00335 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_00335 IPR003959 ATPase, AAA-type, core LIS44_00340 IPR028923 SAICAR synthetase/ADE2, N-terminal LIS44_00340 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase LIS44_00340 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase LIS44_00340 IPR018236 SAICAR synthetase, conserved site LIS44_00350 IPR013785 Aldolase-type TIM barrel LIS44_00350 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA LIS44_00350 IPR002220 DapA-like LIS44_00350 IPR020625 Schiff base-forming aldolase, active site LIS44_00350 IPR020624 Schiff base-forming aldolase, conserved site LIS44_00355 IPR020846 Major facilitator superfamily domain LIS44_00355 IPR011701 Major facilitator superfamily LIS44_00355 IPR005829 Sugar transporter, conserved site LIS44_00355 IPR036259 MFS transporter superfamily LIS44_00360 IPR036380 Isochorismatase-like superfamily LIS44_00360 IPR000868 Isochorismatase-like LIS44_00365 IPR038770 Sodium/solute symporter superfamily LIS44_00365 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 LIS44_00365 IPR004710 Bile acid:sodium symporter LIS44_00375 IPR023190 Phosphoserine phosphatase, domain 2 LIS44_00375 IPR023214 HAD superfamily LIS44_00375 IPR036412 HAD-like superfamily LIS44_00375 IPR002912 ACT domain LIS44_00395 IPR003732 D-aminoacyl-tRNA deacylase DTD LIS44_00395 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily LIS44_00400 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase LIS44_00400 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain LIS44_00400 IPR006406 Nicotinate phosphoribosyltransferase LIS44_00400 IPR007229 Nicotinate phosphoribosyltransferase family LIS44_00400 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal LIS44_00405 IPR001763 Rhodanese-like domain LIS44_00405 IPR036873 Rhodanese-like domain superfamily LIS44_00405 IPR001307 Thiosulphate sulfurtransferase, conserved site LIS44_00410 IPR003817 Phosphatidylserine decarboxylase-related LIS44_00410 IPR033177 Phosphatidylserine decarboxylase LIS44_00410 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 LIS44_00420 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIS44_00420 IPR035684 Arginyl-tRNA synthetase, catalytic core domain LIS44_00420 IPR008909 DALR anticodon binding LIS44_00420 IPR005148 Arginyl tRNA synthetase N-terminal domain LIS44_00420 IPR001278 Arginine-tRNA ligase LIS44_00420 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily LIS44_00425 IPR007383 Protein of unknown function DUF445 LIS44_00440 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LIS44_00440 IPR007370 Glutamate--cysteine ligase LIS44_00440 IPR006334 Glutamate--cysteine ligase, monofunctional LIS44_00445 IPR003752 Disulphide bond formation protein DsbB/BdbC LIS44_00445 IPR022920 Disulphide bond formation protein DsbB LIS44_00445 IPR023380 DsbB-like superfamily LIS44_00455 IPR029058 Alpha/Beta hydrolase fold LIS44_00455 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA LIS44_00460 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LIS44_00460 IPR001241 DNA topoisomerase, type IIA LIS44_00460 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal LIS44_00460 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 LIS44_00460 IPR018522 DNA topoisomerase, type IIA, conserved site LIS44_00460 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative LIS44_00460 IPR006171 TOPRIM domain LIS44_00460 IPR002288 DNA gyrase B subunit, C-terminal LIS44_00460 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_00460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_00460 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_00460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_00465 IPR016181 Acyl-CoA N-acyltransferase LIS44_00465 IPR000182 GNAT domain LIS44_00470 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily LIS44_00470 IPR003055 Nucleoside-specific channel-forming protein Tsx LIS44_00470 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like LIS44_00490 IPR003834 Cytochrome C biogenesis protein, transmembrane domain LIS44_00490 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily LIS44_00490 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LIS44_00490 IPR022910 Thiol:disulphide interchange protein DsbD LIS44_00490 IPR036249 Thioredoxin-like superfamily LIS44_00490 IPR017937 Thioredoxin, conserved site LIS44_00490 IPR013766 Thioredoxin domain LIS44_00490 IPR035671 DsbD gamma LIS44_00495 IPR040079 Glutathione Transferase family LIS44_00495 IPR004045 Glutathione S-transferase, N-terminal LIS44_00495 IPR004046 Glutathione S-transferase, C-terminal LIS44_00495 IPR005955 Glutathione S-transferases, class Zeta LIS44_00495 IPR010987 Glutathione S-transferase, C-terminal-like LIS44_00495 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LIS44_00495 IPR034333 Glutathione S-transferases, class Zeta , N-terminal LIS44_00495 IPR036249 Thioredoxin-like superfamily LIS44_00495 IPR034330 Glutathione S-transferases, class Zeta , C-terminal LIS44_00500 IPR000160 GGDEF domain LIS44_00500 IPR029787 Nucleotide cyclase LIS44_00500 IPR000014 PAS domain LIS44_00500 IPR000700 PAS-associated, C-terminal LIS44_00500 IPR013656 PAS fold-4 LIS44_00500 IPR035965 PAS domain superfamily LIS44_00505 IPR003680 Flavodoxin-like fold LIS44_00505 IPR023048 NADH-azoreductase, FMN-dependent LIS44_00505 IPR029039 Flavoprotein-like superfamily LIS44_00510 IPR029058 Alpha/Beta hydrolase fold LIS44_00510 IPR013094 Alpha/beta hydrolase fold-3 LIS44_00510 IPR002168 Lipase, GDXG, putative histidine active site LIS44_00510 IPR033140 Lipase, GDXG, putative serine active site LIS44_00520 IPR006660 Arsenate reductase-like LIS44_00520 IPR036249 Thioredoxin-like superfamily LIS44_00520 IPR006504 Transcriptional regulator Spx/MgsR LIS44_00530 IPR020848 AP endonuclease 1, conserved site LIS44_00530 IPR005135 Endonuclease/exonuclease/phosphatase LIS44_00530 IPR036691 Endonuclease/exonuclease/phosphatase superfamily LIS44_00530 IPR020847 AP endonuclease 1, binding site LIS44_00530 IPR004808 AP endonuclease 1 LIS44_00535 IPR000836 Phosphoribosyltransferase domain LIS44_00535 IPR023031 Orotate phosphoribosyltransferase LIS44_00535 IPR004467 Orotate phosphoribosyl transferase domain LIS44_00535 IPR029057 Phosphoribosyltransferase-like LIS44_00555 IPR016185 Pre-ATP-grasp domain superfamily LIS44_00555 IPR004215 Prokaryotic glutathione synthetase, N-terminal LIS44_00555 IPR006284 Glutathione synthetase, prokaryotic LIS44_00555 IPR013815 ATP-grasp fold, subdomain 1 LIS44_00555 IPR011761 ATP-grasp fold LIS44_00555 IPR004218 Prokaryotic glutathione synthetase, ATP-binding LIS44_00560 IPR006009 N-acetylglucosaminyltransferase, MurG LIS44_00560 IPR004276 Glycosyltransferase family 28, N-terminal domain LIS44_00560 IPR007235 Glycosyl transferase, family 28, C-terminal LIS44_00565 IPR036565 Mur-like, catalytic domain superfamily LIS44_00565 IPR004101 Mur ligase, C-terminal LIS44_00565 IPR036615 Mur ligase, C-terminal domain superfamily LIS44_00565 IPR013221 Mur ligase, central LIS44_00565 IPR000713 Mur ligase, N-terminal catalytic domain LIS44_00565 IPR005758 UDP-N-acetylmuramate--L-alanine ligase LIS44_00570 IPR011761 ATP-grasp fold LIS44_00570 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site LIS44_00570 IPR005905 D-alanine--D-alanine ligase LIS44_00570 IPR011095 D-alanine--D-alanine ligase, C-terminal LIS44_00570 IPR011127 D-alanine--D-alanine ligase, N-terminal domain LIS44_00570 IPR013815 ATP-grasp fold, subdomain 1 LIS44_00570 IPR016185 Pre-ATP-grasp domain superfamily LIS44_00575 IPR026579 Cell division protein FtsQ LIS44_00575 IPR034746 POTRA domain LIS44_00575 IPR013685 POTRA domain, FtsQ-type LIS44_00575 IPR005548 Cell division protein FtsQ/DivIB LIS44_00580 IPR020823 Cell division protein FtsA LIS44_00580 IPR003494 SHS2 domain inserted in FtsA LIS44_00585 IPR000158 Cell division protein FtsZ LIS44_00585 IPR020805 Cell division protein FtsZ, conserved site LIS44_00585 IPR024757 Cell division protein FtsZ, C-terminal LIS44_00585 IPR008280 Tubulin/FtsZ, C-terminal LIS44_00585 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain LIS44_00585 IPR036525 Tubulin/FtsZ, GTPase domain superfamily LIS44_00585 IPR003008 Tubulin/FtsZ, GTPase domain LIS44_00590 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase LIS44_00590 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal LIS44_00590 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal LIS44_00590 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_00615 IPR001727 Gdt1 family LIS44_00620 IPR012349 FMN-binding split barrel LIS44_00620 IPR001226 Flavodoxin, conserved site LIS44_00620 IPR029039 Flavoprotein-like superfamily LIS44_00620 IPR001279 Metallo-beta-lactamase LIS44_00620 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIS44_00620 IPR002563 Flavin reductase like domain LIS44_00620 IPR008254 Flavodoxin/nitric oxide synthase LIS44_00625 IPR005358 Putative zinc- or iron-chelating domain containing protein LIS44_00630 IPR013785 Aldolase-type TIM barrel LIS44_00630 IPR005990 Inosine-5'-monophosphate dehydrogenase LIS44_00630 IPR015875 IMP dehydrogenase / GMP reductase, conserved site LIS44_00630 IPR001093 IMP dehydrogenase/GMP reductase LIS44_00630 IPR000644 CBS domain LIS44_00635 IPR006352 Phosphoglucosamine mutase, bacterial type LIS44_00635 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III LIS44_00635 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II LIS44_00635 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III LIS44_00635 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I LIS44_00635 IPR016066 Alpha-D-phosphohexomutase, conserved site LIS44_00635 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily LIS44_00635 IPR005841 Alpha-D-phosphohexomutase superfamily LIS44_00635 IPR005843 Alpha-D-phosphohexomutase, C-terminal LIS44_00640 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal LIS44_00640 IPR000659 Pyridoxamine 5'-phosphate oxidase LIS44_00640 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site LIS44_00640 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative LIS44_00640 IPR012349 FMN-binding split barrel LIS44_00645 IPR001667 DDH domain LIS44_00645 IPR038763 DHH phosphoesterase superfamily LIS44_00645 IPR003156 DHHA1 domain LIS44_00645 IPR004610 Bacterial RecJ exonuclease LIS44_00645 IPR041122 RecJ, OB domain LIS44_00670 IPR013785 Aldolase-type TIM barrel LIS44_00670 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LIS44_00675 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal LIS44_00675 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily LIS44_00675 IPR039901 3-deoxy-D-manno-octulosonic acid transferase LIS44_00680 IPR029028 Alpha/beta knot methyltransferases LIS44_00680 IPR006700 Ribosomal RNA small subunit methyltransferase E LIS44_00680 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIS44_00685 IPR010920 LSM domain superfamily LIS44_00685 IPR006685 Mechanosensitive ion channel MscS LIS44_00685 IPR011066 Mechanosensitive ion channel MscS, C-terminal LIS44_00685 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 LIS44_00685 IPR023408 Mechanosensitive ion channel MscS domain superfamily LIS44_00695 IPR011904 Acetate-CoA ligase LIS44_00695 IPR000873 AMP-dependent synthetase/ligase LIS44_00695 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain LIS44_00695 IPR042099 AMP-dependent synthetase-like superfamily LIS44_00695 IPR025110 AMP-binding enzyme, C-terminal domain LIS44_00695 IPR020845 AMP-binding, conserved site LIS44_00700 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_00700 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_00700 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain LIS44_00700 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_00700 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_00710 IPR011042 Six-bladed beta-propeller, TolB-like LIS44_00710 IPR012938 Glucose/Sorbosone dehydrogenase LIS44_00710 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase LIS44_00715 IPR011251 Luciferase-like domain LIS44_00715 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG LIS44_00715 IPR036661 Luciferase-like domain superfamily LIS44_00720 IPR029039 Flavoprotein-like superfamily LIS44_00720 IPR005025 NADPH-dependent FMN reductase-like LIS44_00720 IPR019912 FMN reductase, MsuE-like LIS44_00725 IPR011006 CheY-like superfamily LIS44_00725 IPR016032 Signal transduction response regulator, C-terminal effector LIS44_00725 IPR001789 Signal transduction response regulator, receiver domain LIS44_00725 IPR000792 Transcription regulator LuxR, C-terminal LIS44_00740 IPR007436 Protein of unknown function DUF485 LIS44_00745 IPR038377 Sodium/glucose symporter superfamily LIS44_00745 IPR001734 Sodium/solute symporter LIS44_00745 IPR014083 Cation/acetate symporter ActP LIS44_00745 IPR018212 Sodium/solute symporter, conserved site LIS44_00765 IPR000160 GGDEF domain LIS44_00765 IPR029787 Nucleotide cyclase LIS44_00765 IPR001789 Signal transduction response regulator, receiver domain LIS44_00765 IPR011006 CheY-like superfamily LIS44_00790 IPR013785 Aldolase-type TIM barrel LIS44_00790 IPR016084 Haem oxygenase-like, multi-helical LIS44_00790 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase LIS44_00790 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase LIS44_00790 IPR029056 Ribokinase-like LIS44_00790 IPR004305 Thiaminase-2/PQQC LIS44_00790 IPR036206 Thiamin phosphate synthase superfamily LIS44_00790 IPR034291 Thiamine phosphate synthase LIS44_00790 IPR022998 Thiamine phosphate synthase/TenI LIS44_00800 IPR011701 Major facilitator superfamily LIS44_00800 IPR020846 Major facilitator superfamily domain LIS44_00800 IPR036259 MFS transporter superfamily LIS44_00805 IPR012340 Nucleic acid-binding, OB-fold LIS44_00805 IPR000424 Primosome PriB/single-strand DNA-binding LIS44_00805 IPR011344 Single-stranded DNA-binding protein LIS44_00810 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIS44_00810 IPR017559 Alkyl hydroperoxide reductase subunit C LIS44_00810 IPR013766 Thioredoxin domain LIS44_00810 IPR024706 Peroxiredoxin, AhpC-type LIS44_00810 IPR019479 Peroxiredoxin, C-terminal LIS44_00810 IPR036249 Thioredoxin-like superfamily LIS44_00815 IPR008778 Pirin, C-terminal domain LIS44_00815 IPR003829 Pirin, N-terminal domain LIS44_00815 IPR011051 RmlC-like cupin domain superfamily LIS44_00815 IPR014710 RmlC-like jelly roll fold LIS44_00815 IPR012093 Pirin LIS44_00820 IPR014103 Zeta-carotene desaturase LIS44_00820 IPR002937 Amine oxidase LIS44_00820 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_00855 IPR000477 Reverse transcriptase domain LIS44_00855 IPR024937 Domain X LIS44_00865 IPR039552 Transposase IS66, C-terminal LIS44_00865 IPR004291 Transposase, IS66 LIS44_00865 IPR024474 Zinc-finger binding domain of transposase IS66 LIS44_00865 IPR024463 Transposase TnpC, homeodomain LIS44_00875 IPR009057 Homeobox-like domain superfamily LIS44_00895 IPR025758 Fic/DOC N-terminal LIS44_00895 IPR003812 Fido domain LIS44_00895 IPR036597 Fido-like domain superfamily LIS44_00895 IPR040198 Fido domain-containing protein LIS44_00895 IPR026287 Protein adenylyltransferase SoFic-like LIS44_00900 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIS44_00900 IPR013762 Integrase-like, catalytic domain superfamily LIS44_00900 IPR002104 Integrase, catalytic domain LIS44_00900 IPR038488 Integrase, DNA-binding domain superfamily LIS44_00900 IPR025166 Integrase, DNA-binding domain LIS44_00900 IPR010998 Integrase/recombinase, N-terminal LIS44_00995 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily LIS44_00995 IPR003593 AAA+ ATPase domain LIS44_00995 IPR007694 DNA helicase, DnaB-like, C-terminal LIS44_00995 IPR007693 DNA helicase, DnaB-like, N-terminal LIS44_00995 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LIS44_00995 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_00995 IPR007692 DNA helicase, DnaB type LIS44_01020 IPR014054 Bacteriophage regulatory protein, Rha family LIS44_01020 IPR018877 Bacteriophage P22, Orf201, C-terminal LIS44_01035 IPR025166 Integrase, DNA-binding domain LIS44_01035 IPR038488 Integrase, DNA-binding domain superfamily LIS44_01035 IPR002104 Integrase, catalytic domain LIS44_01035 IPR013762 Integrase-like, catalytic domain superfamily LIS44_01035 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIS44_01035 IPR010998 Integrase/recombinase, N-terminal LIS44_01035 IPR004107 Integrase, SAM-like, N-terminal LIS44_01045 IPR023051 Potassium uptake protein, low affinity, Kup LIS44_01045 IPR003855 Potassium transporter LIS44_01065 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal LIS44_01065 IPR018060 DNA binding HTH domain, AraC-type LIS44_01065 IPR009057 Homeobox-like domain superfamily LIS44_01065 IPR020449 Transcription regulator HTH, AraC- type LIS44_01080 IPR006062 Histidine biosynthesis LIS44_01080 IPR011060 Ribulose-phosphate binding barrel LIS44_01080 IPR004651 Histidine biosynthesis, HisF LIS44_01080 IPR013785 Aldolase-type TIM barrel LIS44_01085 IPR011009 Protein kinase-like domain superfamily LIS44_01085 IPR005280 Homoserine kinase, type II LIS44_01085 IPR002575 Aminoglycoside phosphotransferase LIS44_01090 IPR012340 Nucleic acid-binding, OB-fold LIS44_01090 IPR002059 Cold-shock protein, DNA-binding LIS44_01090 IPR019844 Cold-shock (CSD) domain LIS44_01090 IPR011129 Cold shock domain LIS44_01090 IPR012156 Cold shock, CspA LIS44_01105 IPR004841 Amino acid permease/ SLC12A domain LIS44_01110 IPR006076 FAD dependent oxidoreductase LIS44_01110 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal LIS44_01110 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC LIS44_01110 IPR008471 MnmC-like methyltransferase LIS44_01110 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_01120 IPR011060 Ribulose-phosphate binding barrel LIS44_01120 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA LIS44_01120 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase LIS44_01120 IPR006062 Histidine biosynthesis LIS44_01120 IPR013785 Aldolase-type TIM barrel LIS44_01130 IPR010139 Imidazole glycerol phosphate synthase, subunit H LIS44_01130 IPR017926 Glutamine amidotransferase LIS44_01130 IPR029062 Class I glutamine amidotransferase-like LIS44_01135 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_01135 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site LIS44_01135 IPR000807 Imidazoleglycerol-phosphate dehydratase LIS44_01135 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily LIS44_01180 IPR004537 Tellurite resistance methyltransferase, TehB LIS44_01180 IPR015985 Tellurite resistance methyltransferase TehB-like domain LIS44_01180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_01180 IPR014710 RmlC-like jelly roll fold LIS44_01180 IPR015392 Domain of unknown function DUF1971 LIS44_01180 IPR014431 Tellurite resistance methyltransferase, TehB type-2 LIS44_01190 IPR020616 Thiolase, N-terminal LIS44_01190 IPR020613 Thiolase, conserved site LIS44_01190 IPR020617 Thiolase, C-terminal LIS44_01190 IPR012805 Acetyl-CoA C-acyltransferase FadA LIS44_01190 IPR020615 Thiolase, acyl-enzyme intermediate active site LIS44_01190 IPR002155 Thiolase LIS44_01190 IPR020610 Thiolase, active site LIS44_01190 IPR016039 Thiolase-like LIS44_01195 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site LIS44_01195 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LIS44_01195 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LIS44_01195 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_01195 IPR012799 Fatty oxidation complex, alpha subunit FadB LIS44_01195 IPR029045 ClpP/crotonase-like domain superfamily LIS44_01195 IPR036291 NAD(P)-binding domain superfamily LIS44_01195 IPR001753 Enoyl-CoA hydratase/isomerase LIS44_01195 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LIS44_01200 IPR003959 ATPase, AAA-type, core LIS44_01200 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_01200 IPR001270 ClpA/B family LIS44_01200 IPR019489 Clp ATPase, C-terminal LIS44_01200 IPR003593 AAA+ ATPase domain LIS44_01205 IPR038476 UvrC homology region 2 superfamily LIS44_01205 IPR010994 RuvA domain 2-like LIS44_01205 IPR000305 GIY-YIG endonuclease LIS44_01205 IPR035901 GIY-YIG endonuclease superfamily LIS44_01205 IPR001162 UvrC family homology region LIS44_01205 IPR004791 UvrABC system, subunit C LIS44_01205 IPR036876 UVR domain superfamily LIS44_01205 IPR001943 UVR domain LIS44_01205 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LIS44_01215 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase LIS44_01215 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial LIS44_01215 IPR000462 CDP-alcohol phosphatidyltransferase LIS44_01220 IPR007457 Fe(II) trafficking protein YggX LIS44_01220 IPR036766 Fe(II) trafficking protein YggX superfamily LIS44_01225 IPR000362 Fumarate lyase family LIS44_01225 IPR020557 Fumarate lyase, conserved site LIS44_01225 IPR024083 Fumarase/histidase, N-terminal LIS44_01225 IPR009049 Argininosuccinate lyase LIS44_01225 IPR029419 Argininosuccinate lyase, C-terminal LIS44_01225 IPR008948 L-Aspartase-like LIS44_01225 IPR022761 Fumarate lyase, N-terminal LIS44_01230 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region LIS44_01230 IPR010559 Signal transduction histidine kinase, internal region LIS44_01230 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_01230 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_01230 IPR029016 GAF-like domain superfamily LIS44_01235 IPR011006 CheY-like superfamily LIS44_01235 IPR007492 LytTR DNA-binding domain LIS44_01235 IPR001789 Signal transduction response regulator, receiver domain LIS44_01240 IPR022417 Porphobilinogen deaminase, N-terminal LIS44_01240 IPR022418 Porphobilinogen deaminase, C-terminal LIS44_01240 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily LIS44_01240 IPR000860 Porphobilinogen deaminase LIS44_01240 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site LIS44_01245 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily LIS44_01245 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase LIS44_01245 IPR039793 Uroporphyrinogen-III synthase LIS44_01265 IPR027444 Histone-like protein H-NS, C-terminal domain LIS44_01265 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily LIS44_01265 IPR001801 Histone-like protein H-NS LIS44_01280 IPR004845 Type II secretion system GspD, conserved site LIS44_01280 IPR001775 GspD/PilQ family LIS44_01280 IPR004846 Type II/III secretion system LIS44_01280 IPR038591 NolW-like superfamily LIS44_01280 IPR005644 NolW-like LIS44_01280 IPR013356 Type II secretion system GspD LIS44_01285 IPR000253 Forkhead-associated (FHA) domain LIS44_01285 IPR042287 FhaA, N-terminal LIS44_01285 IPR008984 SMAD/FHA domain superfamily LIS44_01285 IPR022128 Domain of unknown function DUF3662 LIS44_01290 IPR036412 HAD-like superfamily LIS44_01290 IPR006439 HAD hydrolase, subfamily IA LIS44_01290 IPR041492 Haloacid dehalogenase-like hydrolase LIS44_01290 IPR023214 HAD superfamily LIS44_01290 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIS44_01290 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic LIS44_01290 IPR037512 Phosphoglycolate phosphatase, prokaryotic LIS44_01295 IPR015890 Chorismate-utilising enzyme, C-terminal LIS44_01295 IPR005256 Anthranilate synthase component I, PabB-like LIS44_01295 IPR019999 Anthranilate synthase component I-like LIS44_01295 IPR005801 ADC synthase LIS44_01295 IPR006805 Anthranilate synthase component I, N-terminal LIS44_01320 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain LIS44_01320 IPR004161 Translation elongation factor EFTu-like, domain 2 LIS44_01320 IPR033720 Elongation factor Tu, domain 2 LIS44_01320 IPR031157 Tr-type G domain, conserved site LIS44_01320 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_01320 IPR005225 Small GTP-binding protein domain LIS44_01320 IPR000795 Transcription factor, GTP-binding domain LIS44_01320 IPR009000 Translation protein, beta-barrel domain superfamily LIS44_01320 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LIS44_01320 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle LIS44_01320 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LIS44_01330 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit LIS44_01330 IPR038379 SecE superfamily LIS44_01330 IPR005807 SecE subunit of protein translocation complex, bacterial-like LIS44_01335 IPR005824 KOW LIS44_01335 IPR006645 NusG, N-terminal LIS44_01335 IPR036735 NusG, N-terminal domain superfamily LIS44_01335 IPR014722 Ribosomal protein L2, domain 2 LIS44_01335 IPR001062 Transcription antitermination protein, NusG LIS44_01335 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site LIS44_01335 IPR008991 Translation protein SH3-like domain superfamily LIS44_01340 IPR036769 Ribosomal protein L11, C-terminal domain superfamily LIS44_01340 IPR000911 Ribosomal protein L11/L12 LIS44_01340 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily LIS44_01340 IPR006519 Ribosomal protein L11, bacterial-type LIS44_01340 IPR020784 Ribosomal protein L11, N-terminal LIS44_01340 IPR020785 Ribosomal protein L11, conserved site LIS44_01340 IPR020783 Ribosomal protein L11, C-terminal LIS44_01345 IPR023673 Ribosomal protein L1, conserved site LIS44_01345 IPR002143 Ribosomal protein L1 LIS44_01345 IPR023674 Ribosomal protein L1-like LIS44_01345 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein LIS44_01345 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich LIS44_01345 IPR005878 Ribosomal protein L1, bacterial-type LIS44_01350 IPR022973 Ribosomal protein L10 LIS44_01350 IPR002363 Ribosomal protein L10, eubacterial, conserved site LIS44_01350 IPR001790 Ribosomal protein L10P LIS44_01355 IPR013823 Ribosomal protein L7/L12, C-terminal LIS44_01355 IPR000206 Ribosomal protein L7/L12 LIS44_01355 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily LIS44_01355 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LIS44_01355 IPR008932 Ribosomal protein L7/L12, oligomerisation LIS44_01360 IPR007644 RNA polymerase, beta subunit, protrusion LIS44_01360 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain LIS44_01360 IPR015712 DNA-directed RNA polymerase, subunit 2 LIS44_01360 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain LIS44_01360 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily LIS44_01360 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type LIS44_01360 IPR007121 RNA polymerase, beta subunit, conserved site LIS44_01360 IPR007642 RNA polymerase Rpb2, domain 2 LIS44_01360 IPR037034 RNA polymerase Rpb2, domain 2 superfamily LIS44_01360 IPR007645 RNA polymerase Rpb2, domain 3 LIS44_01360 IPR007641 RNA polymerase Rpb2, domain 7 LIS44_01360 IPR014724 RNA polymerase Rpb2, OB-fold LIS44_01365 IPR007080 RNA polymerase Rpb1, domain 1 LIS44_01365 IPR007066 RNA polymerase Rpb1, domain 3 LIS44_01365 IPR042102 RNA polymerase Rpb1, domain 3 superfamily LIS44_01365 IPR007083 RNA polymerase Rpb1, domain 4 LIS44_01365 IPR007081 RNA polymerase Rpb1, domain 5 LIS44_01365 IPR038120 RNA polymerase Rpb1, funnel domain superfamily LIS44_01365 IPR012754 DNA-directed RNA polymerase, subunit beta-prime LIS44_01365 IPR000722 RNA polymerase, alpha subunit LIS44_01365 IPR006592 RNA polymerase, N-terminal LIS44_01390 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal LIS44_01390 IPR032813 Putative Na+/H+ antiporter, N-terminal LIS44_01405 IPR020575 Heat shock protein Hsp90, N-terminal LIS44_01405 IPR037196 HSP90, C-terminal domain LIS44_01405 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_01405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_01405 IPR001404 Heat shock protein Hsp90 family LIS44_01405 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_01440 IPR036249 Thioredoxin-like superfamily LIS44_01440 IPR001853 DSBA-like thioredoxin domain LIS44_01455 IPR017821 Succinate CoA transferase LIS44_01455 IPR037171 NagB/RpiA transferase-like LIS44_01455 IPR003702 Acetyl-CoA hydrolase/transferase LIS44_01455 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily LIS44_01455 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain LIS44_01460 IPR003660 HAMP domain LIS44_01460 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_01460 IPR005467 Histidine kinase domain LIS44_01460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_01460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_01460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_01460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_01465 IPR039420 Transcriptional regulatory protein WalR-like LIS44_01465 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_01465 IPR001789 Signal transduction response regulator, receiver domain LIS44_01465 IPR016032 Signal transduction response regulator, C-terminal effector LIS44_01465 IPR001867 OmpR/PhoB-type DNA-binding domain LIS44_01465 IPR011006 CheY-like superfamily LIS44_01470 IPR012340 Nucleic acid-binding, OB-fold LIS44_01470 IPR037027 YqgF/RNase H-like domain superfamily LIS44_01470 IPR006641 YqgF/RNase H-like domain LIS44_01470 IPR032639 Tex protein, YqgF-like domain LIS44_01470 IPR018974 Tex-like protein, N-terminal LIS44_01470 IPR041692 HHH domain 9 LIS44_01470 IPR023323 Tex-like domain superfamily LIS44_01470 IPR003029 S1 domain LIS44_01470 IPR022967 RNA-binding domain, S1 LIS44_01470 IPR010994 RuvA domain 2-like LIS44_01470 IPR012337 Ribonuclease H-like superfamily LIS44_01470 IPR023319 Tex-like protein, HTH domain superfamily LIS44_01490 IPR025948 HTH-like domain LIS44_01490 IPR038965 Transposase InsF-like LIS44_01490 IPR001584 Integrase, catalytic core LIS44_01490 IPR012337 Ribonuclease H-like superfamily LIS44_01490 IPR036397 Ribonuclease H superfamily LIS44_01495 IPR009057 Homeobox-like domain superfamily LIS44_01500 IPR036291 NAD(P)-binding domain superfamily LIS44_01500 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_01500 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_01505 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_01505 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LIS44_01505 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_01505 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase LIS44_01505 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_01510 IPR003593 AAA+ ATPase domain LIS44_01510 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_01510 IPR032781 ABC-transporter extension domain LIS44_01510 IPR017871 ABC transporter, conserved site LIS44_01510 IPR003439 ABC transporter-like LIS44_01510 IPR022374 Energy-dependent translational throttle protein EttA LIS44_01520 IPR002524 Cation efflux protein LIS44_01520 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LIS44_01520 IPR027469 Cation efflux transmembrane domain superfamily LIS44_01540 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 LIS44_01540 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIS44_01540 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial LIS44_01540 IPR000924 Glutamyl/glutaminyl-tRNA synthetase LIS44_01540 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain LIS44_01540 IPR033910 Glutamyl-tRNA synthetase LIS44_01540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_01540 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding LIS44_01550 IPR021027 Transposase, putative, helix-turn-helix domain LIS44_01550 IPR001959 Probable transposase, IS891/IS1136/IS1341 LIS44_01550 IPR010095 Transposase IS605, OrfB, C-terminal LIS44_01575 IPR037532 Peptidoglycan D,D-transpeptidase FtsI LIS44_01575 IPR012338 Beta-lactamase/transpeptidase-like LIS44_01575 IPR001460 Penicillin-binding protein, transpeptidase LIS44_01575 IPR005311 Penicillin-binding protein, dimerisation domain LIS44_01575 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIS44_01580 IPR036565 Mur-like, catalytic domain superfamily LIS44_01580 IPR004101 Mur ligase, C-terminal LIS44_01580 IPR036615 Mur ligase, C-terminal domain superfamily LIS44_01580 IPR013221 Mur ligase, central LIS44_01580 IPR000713 Mur ligase, N-terminal catalytic domain LIS44_01580 IPR035911 MurE/MurF, N-terminal LIS44_01580 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase LIS44_01585 IPR036615 Mur ligase, C-terminal domain superfamily LIS44_01585 IPR036565 Mur-like, catalytic domain superfamily LIS44_01585 IPR004101 Mur ligase, C-terminal LIS44_01585 IPR000713 Mur ligase, N-terminal catalytic domain LIS44_01585 IPR035911 MurE/MurF, N-terminal LIS44_01585 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase LIS44_01585 IPR013221 Mur ligase, central LIS44_01590 IPR000715 Glycosyl transferase, family 4 LIS44_01590 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase LIS44_01590 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site LIS44_01595 IPR025714 Methyltransferase domain LIS44_01595 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted LIS44_01595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_01600 IPR001959 Probable transposase, IS891/IS1136/IS1341 LIS44_01600 IPR010095 Transposase IS605, OrfB, C-terminal LIS44_01600 IPR021027 Transposase, putative, helix-turn-helix domain LIS44_01605 IPR031376 Penicillin-binding protein, OB-like domain LIS44_01605 IPR036950 Penicillin binding protein transglycosylase domain LIS44_01605 IPR001460 Penicillin-binding protein, transpeptidase LIS44_01605 IPR001264 Glycosyl transferase, family 51 LIS44_01605 IPR023346 Lysozyme-like domain superfamily LIS44_01605 IPR012338 Beta-lactamase/transpeptidase-like LIS44_01610 IPR003494 SHS2 domain inserted in FtsA LIS44_01610 IPR005883 Type IV pilus assembly protein PilM LIS44_01615 IPR007813 Fimbrial assembly PilN LIS44_01620 IPR007445 Pilus assembly protein, PilO LIS44_01620 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LIS44_01630 IPR021731 AMIN domain LIS44_01630 IPR001775 GspD/PilQ family LIS44_01630 IPR005644 NolW-like LIS44_01630 IPR038591 NolW-like superfamily LIS44_01630 IPR013355 Type IV pilus secretin PilQ LIS44_01630 IPR004846 Type II/III secretion system LIS44_01630 IPR004845 Type II secretion system GspD, conserved site LIS44_01630 IPR011662 Secretin/TonB, short N-terminal domain LIS44_01635 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_01635 IPR031322 Shikimate kinase/gluconokinase LIS44_01635 IPR000623 Shikimate kinase/Threonine synthase-like 1 LIS44_01635 IPR023000 Shikimate kinase, conserved site LIS44_01640 IPR030960 3-dehydroquinate synthase domain LIS44_01640 IPR030963 3-dehydroquinate synthase family LIS44_01640 IPR016037 3-dehydroquinate synthase AroB LIS44_01655 IPR009051 Alpha-helical ferredoxin LIS44_01655 IPR028261 Dihydroprymidine dehydrogenase domain II LIS44_01655 IPR023753 FAD/NAD(P)-binding domain LIS44_01655 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_01655 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 LIS44_01665 IPR023353 LemA-like domain superfamily LIS44_01665 IPR007156 LemA LIS44_01670 IPR007621 TPM domain LIS44_01775 IPR001082 Fimbrial protein pilin LIS44_01775 IPR012902 Prokaryotic N-terminal methylation site LIS44_01780 IPR007016 O-antigen ligase-related LIS44_01780 IPR031726 Protein glycosylation ligase domain LIS44_01780 IPR021797 Virulence factor membrane-bound polymerase, C-terminal LIS44_01785 IPR012902 Prokaryotic N-terminal methylation site LIS44_01785 IPR001082 Fimbrial protein pilin LIS44_01795 IPR021797 Virulence factor membrane-bound polymerase, C-terminal LIS44_01795 IPR031726 Protein glycosylation ligase domain LIS44_01795 IPR007016 O-antigen ligase-related LIS44_01800 IPR002024 Bacterioferritin LIS44_01800 IPR012347 Ferritin-like LIS44_01800 IPR009040 Ferritin-like diiron domain LIS44_01800 IPR009078 Ferritin-like superfamily LIS44_01800 IPR008331 Ferritin/DPS protein domain LIS44_01805 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LIS44_01805 IPR007419 BFD-like [2Fe-2S]-binding domain LIS44_01810 IPR006056 RidA family LIS44_01810 IPR019897 RidA, conserved site LIS44_01810 IPR035959 RutC-like superfamily LIS44_01810 IPR006175 YjgF/YER057c/UK114 family LIS44_01815 IPR033655 RelA, TGS domain LIS44_01815 IPR012676 TGS-like LIS44_01815 IPR004095 TGS LIS44_01815 IPR007685 RelA/SpoT LIS44_01815 IPR003607 HD/PDEase domain LIS44_01815 IPR012675 Beta-grasp domain superfamily LIS44_01815 IPR004811 RelA/SpoT family LIS44_01815 IPR002912 ACT domain LIS44_01820 IPR003716 DNA-directed RNA polymerase, omega subunit LIS44_01820 IPR006110 RNA polymerase, subunit omega/K/RPB6 LIS44_01820 IPR012293 RNA polymerase subunit, RPB6/omega LIS44_01820 IPR036161 RPB6/omega subunit-like superfamily LIS44_01825 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_01825 IPR020590 Guanylate kinase, conserved site LIS44_01825 IPR017665 Guanylate kinase LIS44_01825 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LIS44_01825 IPR008144 Guanylate kinase-like domain LIS44_01830 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase LIS44_01835 IPR000983 Bacterial general secretion pathway protein G-type pilin LIS44_01835 IPR012902 Prokaryotic N-terminal methylation site LIS44_01835 IPR001082 Fimbrial protein pilin LIS44_01860 IPR001082 Fimbrial protein pilin LIS44_01860 IPR012902 Prokaryotic N-terminal methylation site LIS44_01865 IPR031982 Type IV minor pilin ComP LIS44_01865 IPR012902 Prokaryotic N-terminal methylation site LIS44_01870 IPR000307 Ribosomal protein S16 LIS44_01870 IPR020592 Ribosomal protein S16, conserved site LIS44_01870 IPR023803 Ribosomal protein S16 domain superfamily LIS44_01875 IPR036976 RimM, N-terminal domain superfamily LIS44_01875 IPR009000 Translation protein, beta-barrel domain superfamily LIS44_01875 IPR027275 PRC-barrel domain LIS44_01875 IPR011961 16S rRNA processing protein RimM LIS44_01875 IPR002676 RimM, N-terminal LIS44_01875 IPR011033 PRC-barrel-like superfamily LIS44_01880 IPR029028 Alpha/beta knot methyltransferases LIS44_01880 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria LIS44_01880 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal LIS44_01880 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIS44_01880 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain LIS44_01885 IPR038657 Ribosomal protein L19 superfamily LIS44_01885 IPR001857 Ribosomal protein L19 LIS44_01885 IPR008991 Translation protein SH3-like domain superfamily LIS44_01885 IPR018257 Ribosomal protein L19, conserved site LIS44_01890 IPR029058 Alpha/Beta hydrolase fold LIS44_01890 IPR000073 Alpha/beta hydrolase fold-1 LIS44_01895 IPR000073 Alpha/beta hydrolase fold-1 LIS44_01895 IPR029058 Alpha/Beta hydrolase fold LIS44_01900 IPR004961 Lipase chaperone LIS44_01905 IPR032819 tRNA pseudouridylate synthase B, C-terminal LIS44_01905 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal LIS44_01905 IPR014780 tRNA pseudouridine synthase II, TruB LIS44_01905 IPR015947 PUA-like superfamily LIS44_01905 IPR002501 Pseudouridine synthase II, N-terminal LIS44_01905 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIS44_01910 IPR002781 Transmembrane protein TauE-like LIS44_01920 IPR000620 EamA domain LIS44_01925 IPR002912 ACT domain LIS44_01925 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIS44_01925 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LIS44_01925 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LIS44_01925 IPR036291 NAD(P)-binding domain superfamily LIS44_01925 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LIS44_01930 IPR016166 FAD-binding domain, PCMH-type LIS44_01930 IPR036318 FAD-binding, type PCMH-like superfamily LIS44_01930 IPR016164 FAD-linked oxidase-like, C-terminal LIS44_01930 IPR004113 FAD-linked oxidase, C-terminal LIS44_01930 IPR004490 Glycolate oxidase subunit GlcD LIS44_01930 IPR006094 FAD linked oxidase, N-terminal LIS44_01930 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 LIS44_01950 IPR020846 Major facilitator superfamily domain LIS44_01950 IPR011701 Major facilitator superfamily LIS44_01950 IPR036259 MFS transporter superfamily LIS44_01950 IPR005829 Sugar transporter, conserved site LIS44_01955 IPR023845 Domain of unknown function DUF3817, transmembrane LIS44_01965 IPR002549 Transmembrane protein TqsA-like LIS44_01970 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_01970 IPR025669 AAA domain LIS44_01980 IPR023576 UbiE/COQ5 methyltransferase, conserved site LIS44_01980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_01980 IPR004033 UbiE/COQ5 methyltransferase LIS44_02005 IPR027493 Ribosomal protein L31 type B LIS44_02005 IPR002150 Ribosomal protein L31 LIS44_02005 IPR042105 Ribosomal protein L31 superfamily LIS44_02005 IPR034704 L28p-like LIS44_02010 IPR011009 Protein kinase-like domain superfamily LIS44_02010 IPR000719 Protein kinase domain LIS44_02010 IPR004147 UbiB domain LIS44_02015 IPR002528 Multi antimicrobial extrusion protein LIS44_02025 IPR007197 Radical SAM LIS44_02025 IPR023404 Radical SAM, alpha/beta horseshoe LIS44_02025 IPR004559 Heme chaperone HemW-like LIS44_02025 IPR034505 Anaerobic coproporphyrinogen-III oxidase LIS44_02025 IPR006638 Elp3/MiaB/NifB LIS44_02025 IPR010723 HemN, C-terminal LIS44_02040 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain LIS44_02040 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_02040 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_02040 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_02040 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_02040 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_02040 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_02045 IPR022893 Shikimate dehydrogenase family LIS44_02045 IPR036291 NAD(P)-binding domain superfamily LIS44_02045 IPR041121 SDH, C-terminal LIS44_02045 IPR011342 Shikimate dehydrogenase LIS44_02045 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal LIS44_02045 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LIS44_02055 IPR018375 Coproporphyrinogen III oxidase, conserved site LIS44_02055 IPR001260 Coproporphyrinogen III oxidase, aerobic LIS44_02055 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily LIS44_02060 IPR023404 Radical SAM, alpha/beta horseshoe LIS44_02060 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN LIS44_02060 IPR034505 Anaerobic coproporphyrinogen-III oxidase LIS44_02060 IPR006638 Elp3/MiaB/NifB LIS44_02060 IPR010723 HemN, C-terminal LIS44_02060 IPR007197 Radical SAM LIS44_02070 IPR005477 Deoxyxylulose-5-phosphate synthase LIS44_02070 IPR029061 Thiamin diphosphate-binding fold LIS44_02070 IPR005475 Transketolase-like, pyrimidine-binding domain LIS44_02070 IPR020826 Transketolase binding site LIS44_02070 IPR033248 Transketolase, C-terminal domain LIS44_02070 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II LIS44_02075 IPR022337 Inositol monophosphatase, SuhB LIS44_02075 IPR033942 Inositol monophosphatase LIS44_02075 IPR020583 Inositol monophosphatase, metal-binding site LIS44_02075 IPR000760 Inositol monophosphatase-like LIS44_02075 IPR020550 Inositol monophosphatase, conserved site LIS44_02080 IPR001650 Helicase, C-terminal LIS44_02080 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIS44_02080 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_02080 IPR011545 DEAD/DEAH box helicase domain LIS44_02080 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LIS44_02080 IPR028622 ATP-dependent RNA helicase RhlE LIS44_02080 IPR014014 RNA helicase, DEAD-box type, Q motif LIS44_02085 IPR017871 ABC transporter, conserved site LIS44_02085 IPR003439 ABC transporter-like LIS44_02085 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_02085 IPR003593 AAA+ ATPase domain LIS44_02085 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl LIS44_02090 IPR030802 ABC transporter permease MalE LIS44_02090 IPR003453 ABC transport permease subunit MlaE, Proteobacteria LIS44_02095 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD LIS44_02095 IPR003399 Mce/MlaD LIS44_02110 IPR004488 Magnesium/cobalt transport protein CorA LIS44_02110 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB LIS44_02115 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG LIS44_02115 IPR031100 LOG family LIS44_02125 IPR005222 Competence protein ComF LIS44_02125 IPR000836 Phosphoribosyltransferase domain LIS44_02125 IPR029057 Phosphoribosyltransferase-like LIS44_02140 IPR041728 GPAT/DHAPAT, acyltransferase domain LIS44_02140 IPR002123 Phospholipid/glycerol acyltransferase LIS44_02140 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB LIS44_02140 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase LIS44_02145 IPR003703 Acyl-CoA thioesterase LIS44_02145 IPR029069 HotDog domain superfamily LIS44_02160 IPR030393 EngB-type guanine nucleotide-binding (G) domain LIS44_02160 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC LIS44_02160 IPR006073 GTP binding domain LIS44_02160 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_02165 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_02165 IPR030489 Transcription regulator Rrf2-type, conserved site LIS44_02165 IPR000944 Transcription regulator Rrf2-type LIS44_02165 IPR036390 Winged helix DNA-binding domain superfamily LIS44_02170 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIS44_02170 IPR000971 Globin LIS44_02170 IPR009050 Globin-like superfamily LIS44_02170 IPR012292 Globin/Protoglobin LIS44_02170 IPR023950 Flavohemoprotein LIS44_02170 IPR017927 FAD-binding domain, ferredoxin reductase-type LIS44_02170 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIS44_02170 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LIS44_02170 IPR017938 Riboflavin synthase-like beta-barrel LIS44_02175 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LIS44_02175 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_02175 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_02175 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_02180 IPR029062 Class I glutamine amidotransferase-like LIS44_02180 IPR017926 Glutamine amidotransferase LIS44_02190 IPR009000 Translation protein, beta-barrel domain superfamily LIS44_02190 IPR019926 Ribosomal protein L3, conserved site LIS44_02190 IPR019927 Ribosomal protein L3, bacterial/organelle-type LIS44_02190 IPR000597 Ribosomal protein L3 LIS44_02195 IPR002136 Ribosomal protein L4/L1e LIS44_02195 IPR023574 Ribosomal protein L4 domain superfamily LIS44_02195 IPR013005 50S ribosomal protein uL4 LIS44_02200 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily LIS44_02200 IPR012678 Ribosomal protein L23/L15e core domain superfamily LIS44_02200 IPR013025 Ribosomal protein L25/L23 LIS44_02205 IPR014726 Ribosomal protein L2, domain 3 LIS44_02205 IPR008991 Translation protein SH3-like domain superfamily LIS44_02205 IPR005880 Ribosomal protein L2, bacterial/organellar-type LIS44_02205 IPR012340 Nucleic acid-binding, OB-fold LIS44_02205 IPR022669 Ribosomal protein L2, C-terminal LIS44_02205 IPR002171 Ribosomal protein L2 LIS44_02205 IPR014722 Ribosomal protein L2, domain 2 LIS44_02205 IPR022666 Ribosomal Proteins L2, RNA binding domain LIS44_02210 IPR005732 Ribosomal protein S19, bacterial-type LIS44_02210 IPR023575 Ribosomal protein S19, superfamily LIS44_02210 IPR002222 Ribosomal protein S19/S15 LIS44_02210 IPR020934 Ribosomal protein S19 conserved site LIS44_02215 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type LIS44_02215 IPR036394 Ribosomal protein L22/L17 superfamily LIS44_02215 IPR018260 Ribosomal protein L22/L17, conserved site LIS44_02215 IPR001063 Ribosomal protein L22/L17 LIS44_02225 IPR020798 Ribosomal protein L16, conserved site LIS44_02225 IPR000114 Ribosomal protein L16 LIS44_02225 IPR036920 Ribosomal protein L10e/L16 superfamily LIS44_02225 IPR016180 Ribosomal protein L10e/L16 LIS44_02230 IPR036049 Ribosomal protein L29/L35 superfamily LIS44_02230 IPR001854 Ribosomal protein L29/L35 LIS44_02235 IPR012340 Nucleic acid-binding, OB-fold LIS44_02235 IPR019984 30S ribosomal protein S17 LIS44_02235 IPR019979 Ribosomal protein S17, conserved site LIS44_02235 IPR000266 Ribosomal protein S17/S11 LIS44_02240 IPR000218 Ribosomal protein L14P LIS44_02240 IPR005745 Ribosomal protein L14P, bacterial-type LIS44_02240 IPR019972 Ribosomal protein L14P, conserved site LIS44_02240 IPR036853 Ribosomal protein L14 superfamily LIS44_02245 IPR005824 KOW LIS44_02245 IPR041988 Ribosomal Protein L26/L24, KOW domain LIS44_02245 IPR014722 Ribosomal protein L2, domain 2 LIS44_02245 IPR003256 Ribosomal protein L24 LIS44_02245 IPR005825 Ribosomal protein L24/L26, conserved site LIS44_02245 IPR008991 Translation protein SH3-like domain superfamily LIS44_02250 IPR002132 Ribosomal protein L5 LIS44_02250 IPR020930 Ribosomal protein L5, bacterial-type LIS44_02250 IPR031310 Ribosomal protein L5, N-terminal LIS44_02250 IPR031309 Ribosomal protein L5, C-terminal LIS44_02250 IPR020929 Ribosomal protein L5, conserved site LIS44_02250 IPR022803 Ribosomal protein L5 domain superfamily LIS44_02255 IPR001209 Ribosomal protein S14 LIS44_02255 IPR023036 Ribosomal protein S14, bacterial/plastid LIS44_02255 IPR018271 Ribosomal protein S14, conserved site LIS44_02260 IPR000630 Ribosomal protein S8 LIS44_02260 IPR035987 Ribosomal protein S8 superfamily LIS44_02265 IPR019906 Ribosomal protein L6, bacterial-type LIS44_02265 IPR000702 Ribosomal protein L6 LIS44_02265 IPR020040 Ribosomal protein L6, alpha-beta domain LIS44_02265 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily LIS44_02265 IPR002358 Ribosomal protein L6, conserved site LIS44_02270 IPR005484 Ribosomal protein L18 LIS44_02270 IPR004389 Ribosomal protein L18, bacterial-type LIS44_02275 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_02275 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_02275 IPR005324 Ribosomal protein S5, C-terminal LIS44_02275 IPR000851 Ribosomal protein S5 LIS44_02275 IPR013810 Ribosomal protein S5, N-terminal LIS44_02275 IPR005712 Ribosomal protein S5, bacterial-type LIS44_02275 IPR018192 Ribosomal protein S5, N-terminal, conserved site LIS44_02280 IPR005996 Ribosomal protein L30, bacterial-type LIS44_02280 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LIS44_02280 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily LIS44_02285 IPR021131 Ribosomal protein L18e/L15P LIS44_02285 IPR036227 Ribosomal L18e/L15P superfamily LIS44_02285 IPR030878 Ribosomal protein L15 LIS44_02285 IPR005749 Ribosomal protein L15, bacterial-type LIS44_02285 IPR001196 Ribosomal protein L15, conserved site LIS44_02290 IPR023201 SecY domain superfamily LIS44_02290 IPR002208 SecY/SEC61-alpha family LIS44_02290 IPR030659 SecY conserved site LIS44_02290 IPR026593 Protein translocase subunit SecY LIS44_02295 IPR000473 Ribosomal protein L36 LIS44_02295 IPR035977 Ribosomal protein L36 superfamily LIS44_02300 IPR018269 Ribosomal protein S13, conserved site LIS44_02300 IPR027437 30s ribosomal protein S13, C-terminal LIS44_02300 IPR001892 Ribosomal protein S13 LIS44_02300 IPR010979 Ribosomal protein S13-like, H2TH LIS44_02300 IPR019980 Ribosomal protein S13, bacterial-type LIS44_02310 IPR002942 RNA-binding S4 domain LIS44_02310 IPR018079 Ribosomal protein S4, conserved site LIS44_02310 IPR005709 Ribosomal protein S4, bacterial-type LIS44_02310 IPR036986 RNA-binding S4 domain superfamily LIS44_02310 IPR022801 Ribosomal protein S4/S9 LIS44_02310 IPR001912 Ribosomal protein S4/S9, N-terminal LIS44_02315 IPR011262 DNA-directed RNA polymerase, insert domain LIS44_02315 IPR036643 DNA-directed RNA polymerase, insert domain superfamily LIS44_02315 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type LIS44_02315 IPR011260 RNA polymerase, alpha subunit, C-terminal LIS44_02315 IPR036603 RNA polymerase, RBP11-like subunit LIS44_02315 IPR011773 DNA-directed RNA polymerase, alpha subunit LIS44_02320 IPR036373 Ribosomal protein L17 superfamily LIS44_02320 IPR000456 Ribosomal protein L17 LIS44_02325 IPR020946 Flavin monooxygenase-like LIS44_02325 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_02330 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_02330 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_02330 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_02330 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_02330 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_02330 IPR006089 Acyl-CoA dehydrogenase, conserved site LIS44_02330 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_02335 IPR005631 Flavinator of succinate dehydrogenase LIS44_02335 IPR036714 Flavinator of succinate dehydrogenase superfamily LIS44_02365 IPR004779 Carboxylate/Amino Acid/Amine Transporter LIS44_02365 IPR000620 EamA domain LIS44_02375 IPR012658 Conserved hypothetical protein CHP02443 LIS44_02380 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LIS44_02380 IPR001567 Peptidase M3A/M3B catalytic domain LIS44_02385 IPR024473 Transposase, IS4, N-terminal LIS44_02385 IPR012337 Ribonuclease H-like superfamily LIS44_02385 IPR002559 Transposase, IS4-like LIS44_02390 IPR012340 Nucleic acid-binding, OB-fold LIS44_02390 IPR040476 RNase II/RNase R, cold shock domain LIS44_02390 IPR011129 Cold shock domain LIS44_02390 IPR022966 Ribonuclease II/R, conserved site LIS44_02390 IPR003029 S1 domain LIS44_02390 IPR001900 Ribonuclease II/R LIS44_02390 IPR013668 Ribonuclease R winged-helix domain LIS44_02390 IPR013223 Ribonuclease B, N-terminal OB domain LIS44_02390 IPR011805 Ribonuclease R LIS44_02390 IPR004476 Ribonuclease II/ribonuclease R LIS44_02390 IPR022967 RNA-binding domain, S1 LIS44_02425 IPR011234 Fumarylacetoacetase-like, C-terminal LIS44_02425 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily LIS44_02430 IPR024473 Transposase, IS4, N-terminal LIS44_02430 IPR002559 Transposase, IS4-like LIS44_02430 IPR012337 Ribonuclease H-like superfamily LIS44_02435 IPR023679 Uncharacterised protein family UPF0761, bacterial LIS44_02435 IPR017039 Virulence factor BrkB LIS44_02440 IPR001226 Flavodoxin, conserved site LIS44_02440 IPR005025 NADPH-dependent FMN reductase-like LIS44_02440 IPR008254 Flavodoxin/nitric oxide synthase LIS44_02440 IPR029039 Flavoprotein-like superfamily LIS44_02440 IPR010089 Flavoprotein WrbA-like LIS44_02465 IPR000836 Phosphoribosyltransferase domain LIS44_02465 IPR029057 Phosphoribosyltransferase-like LIS44_02465 IPR010079 Xanthine phosphoribosyltransferase LIS44_02490 IPR023091 Metalloprotease catalytic domain superfamily, predicted LIS44_02490 IPR002036 Endoribonuclease YbeY LIS44_02490 IPR020549 Endoribonuclease YbeY, conserved site LIS44_02495 IPR003714 PhoH-like protein LIS44_02495 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_02500 IPR002792 TRAM domain LIS44_02500 IPR005839 Methylthiotransferase LIS44_02500 IPR023404 Radical SAM, alpha/beta horseshoe LIS44_02500 IPR006638 Elp3/MiaB/NifB LIS44_02500 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB LIS44_02500 IPR007197 Radical SAM LIS44_02500 IPR013848 Methylthiotransferase, N-terminal LIS44_02500 IPR020612 Methylthiotransferase, conserved site LIS44_02500 IPR038135 Methylthiotransferase, N-terminal domain superfamily LIS44_02505 IPR000189 Prokaryotic transglycosylase, active site LIS44_02505 IPR010090 Phage tail tape measure protein LIS44_02505 IPR016047 Peptidase M23 LIS44_02505 IPR023346 Lysozyme-like domain superfamily LIS44_02505 IPR011055 Duplicated hybrid motif LIS44_02505 IPR008258 Transglycosylase SLT domain 1 LIS44_02515 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal LIS44_02515 IPR001236 Lactate/malate dehydrogenase, N-terminal LIS44_02515 IPR022383 Lactate/malate dehydrogenase, C-terminal LIS44_02515 IPR001557 L-lactate/malate dehydrogenase LIS44_02515 IPR036291 NAD(P)-binding domain superfamily LIS44_02515 IPR010945 Malate dehydrogenase, type 2 LIS44_02540 IPR007473 Ribosomal RNA large subunit methyltransferase J LIS44_02540 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LIS44_02540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_02545 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase LIS44_02545 IPR000462 CDP-alcohol phosphatidyltransferase LIS44_02600 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LIS44_02600 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIS44_02600 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LIS44_02600 IPR006258 Dihydrolipoamide dehydrogenase LIS44_02600 IPR023753 FAD/NAD(P)-binding domain LIS44_02600 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIS44_02600 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_02610 IPR001279 Metallo-beta-lactamase LIS44_02610 IPR029021 Protein-tyrosine phosphatase-like LIS44_02610 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIS44_02610 IPR005939 Beta-lactamase hydrolase-like LIS44_02620 IPR005746 Thioredoxin LIS44_02620 IPR036249 Thioredoxin-like superfamily LIS44_02620 IPR017937 Thioredoxin, conserved site LIS44_02620 IPR013766 Thioredoxin domain LIS44_02635 IPR035570 UPF0234, N-terminal LIS44_02635 IPR035571 UPF0234-like, C-terminal LIS44_02635 IPR036183 YajQ-like superfamily LIS44_02635 IPR007551 Protein of unknown function DUF520 LIS44_02645 IPR008471 MnmC-like methyltransferase LIS44_02645 IPR006076 FAD dependent oxidoreductase LIS44_02645 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC LIS44_02645 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal LIS44_02645 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_02660 IPR006008 Intracellular septation protein A LIS44_02665 IPR004013 PHP domain LIS44_02665 IPR016195 Polymerase/histidinol phosphatase-like LIS44_02665 IPR003141 Polymerase/histidinol phosphatase, N-terminal LIS44_02670 IPR021134 Bestrophin/UPF0187 LIS44_02675 IPR001405 Uncharacterised protein family UPF0758 LIS44_02675 IPR010994 RuvA domain 2-like LIS44_02675 IPR025657 RadC-like JAB domain LIS44_02675 IPR037518 MPN domain LIS44_02680 IPR036551 Flavin prenyltransferase-like LIS44_02680 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal LIS44_02680 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC LIS44_02680 IPR035929 CoaB-like superfamily LIS44_02680 IPR003382 Flavoprotein LIS44_02690 IPR035587 DUS-like, FMN-binding domain LIS44_02690 IPR004653 tRNA-dihydrouridine(20/20a) synthase LIS44_02690 IPR001269 tRNA-dihydrouridine synthase LIS44_02690 IPR018517 tRNA-dihydrouridine synthase, conserved site LIS44_02690 IPR013785 Aldolase-type TIM barrel LIS44_02705 IPR024463 Transposase TnpC, homeodomain LIS44_02705 IPR004291 Transposase, IS66 LIS44_02705 IPR039552 Transposase IS66, C-terminal LIS44_02705 IPR024474 Zinc-finger binding domain of transposase IS66 LIS44_02710 IPR011701 Major facilitator superfamily LIS44_02710 IPR020846 Major facilitator superfamily domain LIS44_02710 IPR036259 MFS transporter superfamily LIS44_02720 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 LIS44_02720 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 LIS44_02720 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LIS44_02720 IPR036291 NAD(P)-binding domain superfamily LIS44_02720 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LIS44_02725 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal LIS44_02730 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIS44_02730 IPR012136 NADP transhydrogenase, beta subunit LIS44_02730 IPR034300 NADP transhydrogenase beta-like domain LIS44_02735 IPR024041 Ammonium transporter AmtB-like domain LIS44_02735 IPR003660 HAMP domain LIS44_02735 IPR018047 Ammonium transporter, conserved site LIS44_02735 IPR029020 Ammonium/urea transporter LIS44_02735 IPR001905 Ammonium transporter LIS44_02745 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LIS44_02750 IPR026040 Hydroxypyruvate isomerase-like LIS44_02750 IPR036237 Xylose isomerase-like superfamily LIS44_02750 IPR013022 Xylose isomerase-like, TIM barrel domain LIS44_02755 IPR015815 3-hydroxyisobutyrate dehydrogenase-related LIS44_02755 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site LIS44_02755 IPR036291 NAD(P)-binding domain superfamily LIS44_02755 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain LIS44_02755 IPR006398 2-hydroxy-3-oxopropionate reductase LIS44_02755 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIS44_02755 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding LIS44_02755 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_02760 IPR029045 ClpP/crotonase-like domain superfamily LIS44_02760 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LIS44_02760 IPR014748 Enoyl-CoA hydratase, C-terminal LIS44_02760 IPR001753 Enoyl-CoA hydratase/isomerase LIS44_02765 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_02765 IPR001789 Signal transduction response regulator, receiver domain LIS44_02765 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LIS44_02765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_02765 IPR036641 HPT domain superfamily LIS44_02765 IPR011006 CheY-like superfamily LIS44_02765 IPR003660 HAMP domain LIS44_02765 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_02765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_02765 IPR005467 Histidine kinase domain LIS44_02765 IPR019247 Histidine kinase BarA, N-terminal LIS44_02765 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_02770 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIS44_02770 IPR001926 Pyridoxal-phosphate dependent enzyme LIS44_02770 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site LIS44_02770 IPR005856 Cysteine synthase LIS44_02770 IPR005858 Cysteine synthase CysM LIS44_02780 IPR012340 Nucleic acid-binding, OB-fold LIS44_02780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_02780 IPR002792 TRAM domain LIS44_02780 IPR010280 (Uracil-5)-methyltransferase family LIS44_02780 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD LIS44_02780 IPR030390 RNA methyltransferase TrmA, active site LIS44_02785 IPR004095 TGS LIS44_02785 IPR012676 TGS-like LIS44_02785 IPR002912 ACT domain LIS44_02785 IPR012675 Beta-grasp domain superfamily LIS44_02785 IPR003607 HD/PDEase domain LIS44_02785 IPR033655 RelA, TGS domain LIS44_02785 IPR007685 RelA/SpoT LIS44_02785 IPR004811 RelA/SpoT family LIS44_02800 IPR003231 Acyl carrier protein (ACP) LIS44_02800 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LIS44_02800 IPR009081 Phosphopantetheine binding ACP domain LIS44_02800 IPR006162 Phosphopantetheine attachment site LIS44_02800 IPR036736 ACP-like superfamily LIS44_02805 IPR036736 ACP-like superfamily LIS44_02805 IPR003231 Acyl carrier protein (ACP) LIS44_02805 IPR009081 Phosphopantetheine binding ACP domain LIS44_02830 IPR024083 Fumarase/histidase, N-terminal LIS44_02830 IPR022313 Phenylalanine/histidine ammonia-lyases, active site LIS44_02830 IPR008948 L-Aspartase-like LIS44_02830 IPR001106 Aromatic amino acid lyase LIS44_02830 IPR005921 Histidine ammonia-lyase LIS44_02850 IPR006905 Flavin-dependent halogenase LIS44_02850 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_02860 IPR016039 Thiolase-like LIS44_02860 IPR018201 Beta-ketoacyl synthase, active site LIS44_02860 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 LIS44_02860 IPR014030 Beta-ketoacyl synthase, N-terminal LIS44_02860 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LIS44_02860 IPR014031 Beta-ketoacyl synthase, C-terminal LIS44_02860 IPR000794 Beta-ketoacyl synthase LIS44_02870 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_02870 IPR036291 NAD(P)-binding domain superfamily LIS44_02870 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative LIS44_02875 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LIS44_02875 IPR014030 Beta-ketoacyl synthase, N-terminal LIS44_02875 IPR014031 Beta-ketoacyl synthase, C-terminal LIS44_02875 IPR018201 Beta-ketoacyl synthase, active site LIS44_02875 IPR000794 Beta-ketoacyl synthase LIS44_02875 IPR016039 Thiolase-like LIS44_02885 IPR005665 Protein-export membrane protein SecF, bacterial LIS44_02885 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LIS44_02885 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LIS44_02885 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LIS44_02890 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LIS44_02890 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LIS44_02890 IPR005791 Protein translocase subunit SecD LIS44_02890 IPR027398 SecD export protein N-terminal TM domain LIS44_02890 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LIS44_02895 IPR003849 Preprotein translocase YajC LIS44_02900 IPR004803 tRNA-guanine transglycosylase LIS44_02900 IPR036511 Queuine tRNA-ribosyltransferase-like LIS44_02900 IPR002616 tRNA-guanine(15) transglycosylase-like LIS44_02910 IPR023353 LemA-like domain superfamily LIS44_02910 IPR007156 LemA LIS44_02920 IPR042118 QueA, domain 1 LIS44_02920 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA LIS44_02920 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily LIS44_02920 IPR042119 QueA, domain 2 LIS44_02945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_02945 IPR003660 HAMP domain LIS44_02945 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_02945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_02945 IPR005467 Histidine kinase domain LIS44_02945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_02945 IPR035965 PAS domain superfamily LIS44_02945 IPR000700 PAS-associated, C-terminal LIS44_02945 IPR000014 PAS domain LIS44_02945 IPR001610 PAC motif LIS44_02945 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_02950 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase LIS44_02950 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain LIS44_02950 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme LIS44_02955 IPR033939 Branched-chain aminotransferase LIS44_02955 IPR005785 Branched-chain amino acid aminotransferase I LIS44_02955 IPR036038 Aminotransferase-like, PLP-dependent enzymes LIS44_02955 IPR018300 Aminotransferase, class IV, conserved site LIS44_02955 IPR001544 Aminotransferase class IV LIS44_02975 IPR002509 NodB homology domain LIS44_02975 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIS44_02985 IPR001296 Glycosyl transferase, family 1 LIS44_02985 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LIS44_03015 IPR007345 Polysaccharide pyruvyl transferase LIS44_03025 IPR004960 Bacterial lipid A biosynthesis acyltransferase LIS44_03025 IPR011921 Lipid A biosynthesis myristoyltransferase LIS44_03035 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LIS44_03035 IPR006195 Aminoacyl-tRNA synthetase, class II LIS44_03035 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb LIS44_03035 IPR004115 GAD-like domain superfamily LIS44_03035 IPR004524 Aspartate-tRNA ligase, type 1 LIS44_03035 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LIS44_03035 IPR029351 GAD domain LIS44_03035 IPR012340 Nucleic acid-binding, OB-fold LIS44_03045 IPR039426 Vitamin B12 transporter BtuB-like LIS44_03045 IPR012910 TonB-dependent receptor, plug domain LIS44_03045 IPR037066 TonB-dependent receptor, plug domain superfamily LIS44_03045 IPR000531 TonB-dependent receptor-like, beta-barrel LIS44_03065 IPR009315 Phosphate-starvation-induced PsiE LIS44_03065 IPR020948 Phosphate-starvation-induced PsiE-like LIS44_03075 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_03075 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_03075 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_03075 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_03075 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_03075 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_03075 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain LIS44_03080 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_03080 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_03080 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_03080 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_03080 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_03080 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain LIS44_03080 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_03090 IPR003660 HAMP domain LIS44_03090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_03090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_03090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_03090 IPR005467 Histidine kinase domain LIS44_03090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_03090 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_03095 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_03095 IPR016032 Signal transduction response regulator, C-terminal effector LIS44_03095 IPR001867 OmpR/PhoB-type DNA-binding domain LIS44_03095 IPR011006 CheY-like superfamily LIS44_03095 IPR001789 Signal transduction response regulator, receiver domain LIS44_03095 IPR039420 Transcriptional regulatory protein WalR-like LIS44_03100 IPR007351 Uncharacterised protein YjbR LIS44_03100 IPR038056 YjbR-like superfamily LIS44_03105 IPR003846 Protein adenylyltransferase SelO LIS44_03125 IPR016030 Cobalamin adenosyltransferase-like LIS44_03125 IPR036451 Cobalamin adenosyltransferase-like superfamily LIS44_03125 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type LIS44_03130 IPR037066 TonB-dependent receptor, plug domain superfamily LIS44_03130 IPR010101 TonB-dependent vitamin B12 transporter BtuB LIS44_03130 IPR039426 Vitamin B12 transporter BtuB-like LIS44_03130 IPR012910 TonB-dependent receptor, plug domain LIS44_03130 IPR000531 TonB-dependent receptor-like, beta-barrel LIS44_03130 IPR010916 TonB box, conserved site LIS44_03130 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LIS44_03135 IPR011060 Ribulose-phosphate binding barrel LIS44_03135 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) LIS44_03135 IPR013785 Aldolase-type TIM barrel LIS44_03140 IPR023026 Tryptophan synthase beta chain/beta chain-like LIS44_03140 IPR001926 Pyridoxal-phosphate dependent enzyme LIS44_03140 IPR006653 Tryptophan synthase, beta chain, conserved site LIS44_03140 IPR006654 Tryptophan synthase, beta chain LIS44_03140 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIS44_03160 IPR009057 Homeobox-like domain superfamily LIS44_03160 IPR018060 DNA binding HTH domain, AraC-type LIS44_03160 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal LIS44_03165 IPR018204 Tryptophan synthase, alpha chain, active site LIS44_03165 IPR013785 Aldolase-type TIM barrel LIS44_03165 IPR011060 Ribulose-phosphate binding barrel LIS44_03165 IPR002028 Tryptophan synthase, alpha chain LIS44_03170 IPR029045 ClpP/crotonase-like domain superfamily LIS44_03170 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit LIS44_03170 IPR034733 Acetyl-CoA carboxylase LIS44_03170 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal LIS44_03190 IPR001279 Metallo-beta-lactamase LIS44_03190 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIS44_03195 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIS44_03195 IPR024706 Peroxiredoxin, AhpC-type LIS44_03195 IPR019479 Peroxiredoxin, C-terminal LIS44_03195 IPR022915 Peroxiredoxin, TDXH subfamily LIS44_03195 IPR036249 Thioredoxin-like superfamily LIS44_03195 IPR013766 Thioredoxin domain LIS44_03200 IPR011116 SecA Wing/Scaffold LIS44_03200 IPR011130 SecA, preprotein cross-linking domain LIS44_03200 IPR014018 SecA motor DEAD LIS44_03200 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_03200 IPR020937 SecA conserved site LIS44_03200 IPR000185 Protein translocase subunit SecA LIS44_03200 IPR004027 SEC-C motif LIS44_03200 IPR011115 SecA DEAD-like, N-terminal LIS44_03200 IPR036670 SecA, preprotein cross-linking domain superfamily LIS44_03200 IPR036266 SecA, Wing/Scaffold superfamily LIS44_03215 IPR036094 Quinolinate synthetase A superfamily LIS44_03215 IPR023513 Quinolinate synthase A, type 1 LIS44_03215 IPR003473 Quinolinate synthetase A LIS44_03265 IPR000394 RNA polymerase sigma factor 54 LIS44_03265 IPR007046 RNA polymerase sigma factor 54, core-binding domain LIS44_03265 IPR007634 RNA polymerase sigma factor 54, DNA-binding LIS44_03265 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily LIS44_03270 IPR036567 Ribosome hibernation promotion factor-like LIS44_03270 IPR003489 Ribosome hibernation promoting factor/RaiA LIS44_03275 IPR036065 BolA-like superfamily LIS44_03275 IPR002634 BolA protein LIS44_03285 IPR013820 ATP phosphoribosyltransferase, catalytic domain LIS44_03285 IPR018198 ATP phosphoribosyltransferase, conserved site LIS44_03285 IPR001348 ATP phosphoribosyltransferase HisG LIS44_03285 IPR024893 ATP phosphoribosyltransferase HisG, short form LIS44_03295 IPR004839 Aminotransferase, class I/classII LIS44_03295 IPR005861 Histidinol-phosphate aminotransferase family LIS44_03295 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_03295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_03295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_03300 IPR005801 ADC synthase LIS44_03300 IPR005802 Aminodeoxychorismate synthase, component I LIS44_03300 IPR006805 Anthranilate synthase component I, N-terminal LIS44_03300 IPR015890 Chorismate-utilising enzyme, C-terminal LIS44_03300 IPR019999 Anthranilate synthase component I-like LIS44_03340 IPR015797 NUDIX hydrolase-like domain superfamily LIS44_03340 IPR023735 Uncharacterised nudix hydrolase NudL LIS44_03340 IPR000059 NUDIX hydrolase, NudL, conserved site LIS44_03340 IPR000086 NUDIX hydrolase domain LIS44_03345 IPR011004 Trimeric LpxA-like superfamily LIS44_03345 IPR001451 Hexapeptide repeat LIS44_03355 IPR003824 Undecaprenyl-diphosphatase UppP LIS44_03360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_03360 IPR007536 Ribosomal RNA small subunit methyltransferase J LIS44_03370 IPR014186 S-formylglutathione hydrolase LIS44_03370 IPR000801 Putative esterase LIS44_03370 IPR029058 Alpha/Beta hydrolase fold LIS44_03375 IPR013785 Aldolase-type TIM barrel LIS44_03375 IPR000056 Ribulose-phosphate 3-epimerase-like LIS44_03375 IPR011060 Ribulose-phosphate binding barrel LIS44_03375 IPR026019 Ribulose-phosphate 3-epimerase LIS44_03400 IPR034279 Copper resistance protein, third cupredoxin domain LIS44_03400 IPR001117 Multicopper oxidase, type 1 LIS44_03400 IPR011706 Multicopper oxidase, type 2 LIS44_03400 IPR011707 Multicopper oxidase, type 3 LIS44_03400 IPR006376 Copper-resistance protein CopA LIS44_03400 IPR033138 Multicopper oxidases, conserved site LIS44_03400 IPR002355 Multicopper oxidase, copper-binding site LIS44_03400 IPR008972 Cupredoxin LIS44_03400 IPR034284 Copper resistance protein, first cupredoxin domain LIS44_03400 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LIS44_03400 IPR034282 Copper resistance protein CopA, second cupredoxin domain LIS44_03400 IPR006311 Twin-arginine translocation pathway, signal sequence LIS44_03410 IPR000390 Small multidrug resistance protein family LIS44_03415 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_03415 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily LIS44_03415 IPR023546 Methylated-DNA--protein-cysteine methyltransferase LIS44_03415 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site LIS44_03415 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain LIS44_03415 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding LIS44_03415 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain LIS44_03420 IPR011528 Nuclease-related domain, NERD LIS44_03425 IPR013785 Aldolase-type TIM barrel LIS44_03425 IPR035587 DUS-like, FMN-binding domain LIS44_03425 IPR032886 tRNA-dihydrouridine(16) synthase LIS44_03425 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal LIS44_03425 IPR001269 tRNA-dihydrouridine synthase LIS44_03425 IPR018517 tRNA-dihydrouridine synthase, conserved site LIS44_03430 IPR011701 Major facilitator superfamily LIS44_03430 IPR020846 Major facilitator superfamily domain LIS44_03430 IPR036259 MFS transporter superfamily LIS44_03435 IPR011966 Phenylacetic acid degradation protein PaaN LIS44_03435 IPR002539 MaoC-like dehydratase domain LIS44_03435 IPR029069 HotDog domain superfamily LIS44_03435 IPR016163 Aldehyde dehydrogenase, C-terminal LIS44_03435 IPR016162 Aldehyde dehydrogenase, N-terminal LIS44_03435 IPR016161 Aldehyde/histidinol dehydrogenase LIS44_03435 IPR015590 Aldehyde dehydrogenase domain LIS44_03440 IPR012347 Ferritin-like LIS44_03440 IPR009078 Ferritin-like superfamily LIS44_03440 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A LIS44_03440 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C LIS44_03445 IPR009359 Phenylacetic acid degradation B LIS44_03445 IPR038693 Phenylacetyl-CoA epoxidase, subunit B LIS44_03450 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C LIS44_03450 IPR009078 Ferritin-like superfamily LIS44_03450 IPR012347 Ferritin-like LIS44_03450 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C LIS44_03460 IPR036010 2Fe-2S ferredoxin-like superfamily LIS44_03460 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LIS44_03460 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LIS44_03460 IPR012675 Beta-grasp domain superfamily LIS44_03460 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LIS44_03460 IPR017927 FAD-binding domain, ferredoxin reductase-type LIS44_03460 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIS44_03460 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIS44_03460 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIS44_03460 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit LIS44_03460 IPR017938 Riboflavin synthase-like beta-barrel LIS44_03470 IPR014748 Enoyl-CoA hydratase, C-terminal LIS44_03470 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB LIS44_03470 IPR029045 ClpP/crotonase-like domain superfamily LIS44_03470 IPR001753 Enoyl-CoA hydratase/isomerase LIS44_03475 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site LIS44_03475 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LIS44_03475 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC LIS44_03475 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LIS44_03475 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LIS44_03475 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_03475 IPR036291 NAD(P)-binding domain superfamily LIS44_03480 IPR012793 Beta-ketoadipyl CoA thiolase LIS44_03480 IPR002155 Thiolase LIS44_03480 IPR016039 Thiolase-like LIS44_03480 IPR020610 Thiolase, active site LIS44_03480 IPR020617 Thiolase, C-terminal LIS44_03480 IPR020613 Thiolase, conserved site LIS44_03480 IPR020616 Thiolase, N-terminal LIS44_03480 IPR020615 Thiolase, acyl-enzyme intermediate active site LIS44_03485 IPR028154 AMP-dependent ligase, C-terminal LIS44_03485 IPR000873 AMP-dependent synthetase/ligase LIS44_03485 IPR042099 AMP-dependent synthetase-like superfamily LIS44_03485 IPR011880 Phenylacetate-CoA ligase LIS44_03490 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_03490 IPR012906 PaaX-like, N-terminal LIS44_03490 IPR013225 PaaX-like, C-terminal LIS44_03490 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX LIS44_03495 IPR001451 Hexapeptide repeat LIS44_03495 IPR023446 Carnitine operon protein CaiE LIS44_03495 IPR011004 Trimeric LpxA-like superfamily LIS44_03510 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily LIS44_03510 IPR013822 Signal recognition particle SRP54, helical bundle LIS44_03510 IPR004125 Signal recognition particle, SRP54 subunit, M-domain LIS44_03510 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_03510 IPR004780 Signal recognition particle protein LIS44_03510 IPR022941 Signal recognition particle, SRP54 subunit LIS44_03510 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LIS44_03510 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily LIS44_03510 IPR003593 AAA+ ATPase domain LIS44_03520 IPR004619 Type III pantothenate kinase LIS44_03530 IPR002781 Transmembrane protein TauE-like LIS44_03540 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_03540 IPR003395 RecF/RecN/SMC, N-terminal LIS44_03540 IPR024704 Structural maintenance of chromosomes protein LIS44_03540 IPR036277 SMCs flexible hinge superfamily LIS44_03540 IPR011890 Structural maintenance of chromosomes protein, prokaryotic LIS44_03540 IPR010935 SMCs flexible hinge LIS44_03550 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type LIS44_03550 IPR010994 RuvA domain 2-like LIS44_03550 IPR001357 BRCT domain LIS44_03550 IPR036420 BRCT domain superfamily LIS44_03550 IPR041663 DisA/LigA, helix-hairpin-helix motif LIS44_03550 IPR018239 NAD-dependent DNA ligase, active site LIS44_03550 IPR033136 NAD-dependent DNA ligase, conserved site LIS44_03550 IPR001679 NAD-dependent DNA ligase LIS44_03550 IPR013839 NAD-dependent DNA ligase, adenylation LIS44_03550 IPR013840 NAD-dependent DNA ligase, N-terminal LIS44_03550 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LIS44_03550 IPR012340 Nucleic acid-binding, OB-fold LIS44_03550 IPR004150 NAD-dependent DNA ligase, OB-fold LIS44_03555 IPR016909 Ribosomal RNA large subunit methyltransferase F LIS44_03555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_03555 IPR010286 METTL16/RlmF family LIS44_03560 IPR008331 Ferritin/DPS protein domain LIS44_03560 IPR012347 Ferritin-like LIS44_03560 IPR009040 Ferritin-like diiron domain LIS44_03560 IPR002024 Bacterioferritin LIS44_03560 IPR009078 Ferritin-like superfamily LIS44_03565 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIS44_03565 IPR024706 Peroxiredoxin, AhpC-type LIS44_03565 IPR036249 Thioredoxin-like superfamily LIS44_03565 IPR013766 Thioredoxin domain LIS44_03575 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_03575 IPR007197 Radical SAM LIS44_03575 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_03575 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_03575 IPR013785 Aldolase-type TIM barrel LIS44_03575 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB LIS44_03575 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA LIS44_03575 IPR010722 Biotin and thiamin synthesis-associated domain LIS44_03575 IPR006638 Elp3/MiaB/NifB LIS44_03575 IPR005814 Aminotransferase class-III LIS44_03580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_03580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_03580 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type LIS44_03580 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LIS44_03580 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_03580 IPR004839 Aminotransferase, class I/classII LIS44_03585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_03585 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LIS44_03590 IPR004472 Dethiobiotin synthase BioD LIS44_03590 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_03605 IPR005234 Chromosome segregation/condensation protein ScpB LIS44_03605 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_03605 IPR036390 Winged helix DNA-binding domain superfamily LIS44_03610 IPR003768 Segregation and condensation protein A LIS44_03625 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LIS44_03625 IPR006070 YrdC-like domain LIS44_03630 IPR007411 Elongation factor P hydroxylase LIS44_03635 IPR003772 Large ribosomal RNA subunit accumulation protein YceD LIS44_03635 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria LIS44_03640 IPR002677 Ribosomal protein L32p LIS44_03640 IPR011332 Zinc-binding ribosomal protein LIS44_03645 IPR014043 Acyl transferase LIS44_03645 IPR001227 Acyl transferase domain superfamily LIS44_03645 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding LIS44_03645 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LIS44_03645 IPR024925 Malonyl CoA-acyl carrier protein transacylase LIS44_03645 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type LIS44_03650 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LIS44_03650 IPR036291 NAD(P)-binding domain superfamily LIS44_03650 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_03650 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_03655 IPR036736 ACP-like superfamily LIS44_03655 IPR009081 Phosphopantetheine binding ACP domain LIS44_03655 IPR006162 Phosphopantetheine attachment site LIS44_03655 IPR003231 Acyl carrier protein (ACP) LIS44_03660 IPR007055 BON domain LIS44_03660 IPR018392 LysM domain LIS44_03660 IPR036779 LysM domain superfamily LIS44_03660 IPR014004 Transport-associated and nodulation domain, bacteria LIS44_03670 IPR029058 Alpha/Beta hydrolase fold LIS44_03670 IPR000073 Alpha/beta hydrolase fold-1 LIS44_03670 IPR019913 Pyrimidine utilisation protein RutD LIS44_03680 IPR007829 TM2 domain LIS44_03685 IPR008523 Protein of unknown function DUF805 LIS44_03695 IPR033909 Ribonucleotide reductase small subunit LIS44_03695 IPR009078 Ferritin-like superfamily LIS44_03695 IPR012348 Ribonucleotide reductase-like LIS44_03695 IPR000358 Ribonucleotide reductase small subunit family LIS44_03710 IPR005144 ATP-cone domain LIS44_03710 IPR013346 Ribonucleotide reductase, class I , alpha subunit LIS44_03710 IPR039718 Ribonucleoside-diphosphate reductase large subunit LIS44_03710 IPR000788 Ribonucleotide reductase large subunit, C-terminal LIS44_03710 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal LIS44_03710 IPR013509 Ribonucleotide reductase large subunit, N-terminal LIS44_03715 IPR039420 Transcriptional regulatory protein WalR-like LIS44_03715 IPR011006 CheY-like superfamily LIS44_03715 IPR016032 Signal transduction response regulator, C-terminal effector LIS44_03715 IPR001789 Signal transduction response regulator, receiver domain LIS44_03715 IPR001867 OmpR/PhoB-type DNA-binding domain LIS44_03715 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_03720 IPR003660 HAMP domain LIS44_03720 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_03720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_03720 IPR005467 Histidine kinase domain LIS44_03720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_03720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_03720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_03730 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid LIS44_03730 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 LIS44_03730 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily LIS44_03735 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit LIS44_03735 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit LIS44_03740 IPR023062 NADH dehydrogenase, subunit CD LIS44_03740 IPR029014 [NiFe]-hydrogenase, large subunit LIS44_03740 IPR010218 NADH dehydrogenase, subunit C LIS44_03740 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H LIS44_03740 IPR001135 NADH-quinone oxidoreductase, subunit D LIS44_03740 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily LIS44_03740 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily LIS44_03740 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit LIS44_03740 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site LIS44_03740 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site LIS44_03745 IPR002023 NADH-quinone oxidoreductase subunit E-like LIS44_03745 IPR042128 NuoE domain LIS44_03745 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal LIS44_03745 IPR036249 Thioredoxin-like superfamily LIS44_03750 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily LIS44_03750 IPR019554 Soluble ligand binding domain LIS44_03750 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain LIS44_03750 IPR011537 NADH ubiquinone oxidoreductase, F subunit LIS44_03750 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain LIS44_03750 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily LIS44_03750 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site LIS44_03755 IPR036010 2Fe-2S ferredoxin-like superfamily LIS44_03755 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LIS44_03755 IPR009010 Aspartate decarboxylase-like domain superfamily LIS44_03755 IPR006656 Molybdopterin oxidoreductase LIS44_03755 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site LIS44_03755 IPR010228 NADH:ubiquinone oxidoreductase, subunit G LIS44_03755 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding LIS44_03755 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LIS44_03765 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIS44_03765 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIS44_03765 IPR010226 NADH-quinone oxidoreductase, chain I LIS44_03770 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ LIS44_03770 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 LIS44_03775 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K LIS44_03775 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like LIS44_03780 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal LIS44_03780 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LIS44_03780 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup LIS44_03780 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 LIS44_03795 IPR034332 Uracil phosphoribosyltransferase, bacterial-type LIS44_03795 IPR005765 Uracil phosphoribosyl transferase LIS44_03795 IPR000836 Phosphoribosyltransferase domain LIS44_03795 IPR029057 Phosphoribosyltransferase-like LIS44_03810 IPR012156 Cold shock, CspA LIS44_03810 IPR019844 Cold-shock (CSD) domain LIS44_03810 IPR002059 Cold-shock protein, DNA-binding LIS44_03810 IPR012340 Nucleic acid-binding, OB-fold LIS44_03810 IPR011129 Cold shock domain LIS44_03815 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_03815 IPR000847 Transcription regulator HTH, LysR LIS44_03815 IPR036390 Winged helix DNA-binding domain superfamily LIS44_03815 IPR005119 LysR, substrate-binding LIS44_03820 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LIS44_03820 IPR017927 FAD-binding domain, ferredoxin reductase-type LIS44_03820 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIS44_03820 IPR033892 Ferredoxin--NADP reductase, bacteria LIS44_03820 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIS44_03820 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIS44_03820 IPR017938 Riboflavin synthase-like beta-barrel LIS44_03850 IPR023166 HI0933-like insert domain superfamily LIS44_03850 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like LIS44_03850 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_03855 IPR020601 1-aminocyclopropane-1-carboxylate deaminase, bacterial LIS44_03855 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIS44_03855 IPR005965 1-aminocyclopropane-1-carboxylate deaminase LIS44_03855 IPR001926 Pyridoxal-phosphate dependent enzyme LIS44_03855 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase LIS44_03880 IPR036291 NAD(P)-binding domain superfamily LIS44_03880 IPR013549 Domain of unknown function DUF1731 LIS44_03880 IPR001509 NAD-dependent epimerase/dehydratase LIS44_03880 IPR010099 Epimerase family protein SDR39U1 LIS44_03885 IPR012727 Glycine oxidase ThiO LIS44_03885 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_03885 IPR006076 FAD dependent oxidoreductase LIS44_03890 IPR013785 Aldolase-type TIM barrel LIS44_03890 IPR001731 Delta-aminolevulinic acid dehydratase LIS44_03890 IPR030656 Delta-aminolevulinic acid dehydratase, active site LIS44_03895 IPR029069 HotDog domain superfamily LIS44_03895 IPR003736 Phenylacetic acid degradation-related domain LIS44_03895 IPR006683 Thioesterase domain LIS44_03900 IPR005694 Efflux pump membrane protein LIS44_03900 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LIS44_03905 IPR036259 MFS transporter superfamily LIS44_03905 IPR020846 Major facilitator superfamily domain LIS44_03905 IPR011701 Major facilitator superfamily LIS44_03905 IPR004638 Drug resistance transporter EmrB-like LIS44_03910 IPR005999 Glycerol kinase LIS44_03910 IPR018484 Carbohydrate kinase, FGGY, N-terminal LIS44_03910 IPR018483 Carbohydrate kinase, FGGY, conserved site LIS44_03910 IPR018485 Carbohydrate kinase, FGGY, C-terminal LIS44_03910 IPR000577 Carbohydrate kinase, FGGY LIS44_03920 IPR010998 Integrase/recombinase, N-terminal LIS44_03920 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIS44_03920 IPR013762 Integrase-like, catalytic domain superfamily LIS44_03920 IPR002104 Integrase, catalytic domain LIS44_03920 IPR038488 Integrase, DNA-binding domain superfamily LIS44_03920 IPR025166 Integrase, DNA-binding domain LIS44_03995 IPR009057 Homeobox-like domain superfamily LIS44_04005 IPR024463 Transposase TnpC, homeodomain LIS44_04005 IPR004291 Transposase, IS66 LIS44_04005 IPR039552 Transposase IS66, C-terminal LIS44_04005 IPR024474 Zinc-finger binding domain of transposase IS66 LIS44_04095 IPR005543 PASTA domain LIS44_04095 IPR000719 Protein kinase domain LIS44_04095 IPR011009 Protein kinase-like domain superfamily LIS44_04095 IPR008271 Serine/threonine-protein kinase, active site LIS44_04095 IPR017441 Protein kinase, ATP binding site LIS44_04105 IPR036390 Winged helix DNA-binding domain superfamily LIS44_04105 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_04105 IPR018982 RQC domain LIS44_04105 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LIS44_04105 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_04105 IPR001650 Helicase, C-terminal LIS44_04105 IPR010997 HRDC-like superfamily LIS44_04105 IPR011545 DEAD/DEAH box helicase domain LIS44_04105 IPR004589 DNA helicase, ATP-dependent, RecQ type LIS44_04105 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial LIS44_04105 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIS44_04105 IPR002121 HRDC domain LIS44_04115 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_04115 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_04115 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_04115 IPR005814 Aminotransferase class-III LIS44_04115 IPR004632 4-aminobutyrate aminotransferase, bacterial LIS44_04120 IPR016162 Aldehyde dehydrogenase, N-terminal LIS44_04120 IPR016161 Aldehyde/histidinol dehydrogenase LIS44_04120 IPR016163 Aldehyde dehydrogenase, C-terminal LIS44_04120 IPR016160 Aldehyde dehydrogenase, cysteine active site LIS44_04120 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LIS44_04120 IPR015590 Aldehyde dehydrogenase domain LIS44_04120 IPR010102 Succinate semialdehyde dehydrogenase LIS44_04130 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase LIS44_04130 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B LIS44_04135 IPR032710 NTF2-like domain superfamily LIS44_04135 IPR000391 Ring-hydroxylating dioxygenase beta subunit LIS44_04135 IPR023712 3-phenylpropionate/cinnamic acid dioxygenase, beta subunit LIS44_04140 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain LIS44_04140 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit LIS44_04140 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site LIS44_04140 IPR017941 Rieske [2Fe-2S] iron-sulphur domain LIS44_04140 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit LIS44_04140 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LIS44_04160 IPR034904 Fe-S cluster assembly domain superfamily LIS44_04160 IPR019591 Mrp/NBP35 ATP-binding protein LIS44_04160 IPR000808 Mrp, conserved site LIS44_04160 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_04160 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 LIS44_04175 IPR036157 dUTPase-like superfamily LIS44_04175 IPR011962 dCTP deaminase LIS44_04175 IPR029054 dUTPase-like LIS44_04175 IPR033704 dUTPase, trimeric LIS44_04200 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain LIS44_04200 IPR006195 Aminoacyl-tRNA synthetase, class II LIS44_04200 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily LIS44_04200 IPR004154 Anticodon-binding LIS44_04200 IPR033730 Prokaryote proline-tRNA ligase core domain LIS44_04200 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LIS44_04200 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type LIS44_04200 IPR002316 Proline-tRNA ligase, class IIa LIS44_04200 IPR036621 Anticodon-binding domain superfamily LIS44_04200 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 LIS44_04205 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LIS44_04205 IPR001036 Acriflavin resistance protein LIS44_04210 IPR006143 RND efflux pump, membrane fusion protein LIS44_04210 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LIS44_04220 IPR011006 CheY-like superfamily LIS44_04220 IPR001789 Signal transduction response regulator, receiver domain LIS44_04225 IPR011006 CheY-like superfamily LIS44_04225 IPR001789 Signal transduction response regulator, receiver domain LIS44_04230 IPR039315 Chemotaxis protein CheW LIS44_04230 IPR036061 CheW-like domain superfamily LIS44_04230 IPR002545 CheW-like domain LIS44_04235 IPR004090 Chemotaxis methyl-accepting receptor LIS44_04235 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain LIS44_04235 IPR029095 NarX-like, N-terminal LIS44_04235 IPR003660 HAMP domain LIS44_04240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_04240 IPR001789 Signal transduction response regulator, receiver domain LIS44_04240 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain LIS44_04240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_04240 IPR036641 HPT domain superfamily LIS44_04240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_04240 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_04240 IPR005467 Histidine kinase domain LIS44_04240 IPR004105 Histidine kinase CheA-like, homodimeric domain LIS44_04240 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily LIS44_04240 IPR002545 CheW-like domain LIS44_04240 IPR011006 CheY-like superfamily LIS44_04240 IPR036061 CheW-like domain superfamily LIS44_04270 IPR005490 L,D-transpeptidase catalytic domain LIS44_04270 IPR018392 LysM domain LIS44_04270 IPR038063 L,D-transpeptidase catalytic domain-like LIS44_04270 IPR036779 LysM domain superfamily LIS44_04325 IPR008254 Flavodoxin/nitric oxide synthase LIS44_04325 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain LIS44_04325 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding LIS44_04325 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria LIS44_04325 IPR017927 FAD-binding domain, ferredoxin reductase-type LIS44_04325 IPR001094 Flavodoxin-like LIS44_04325 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIS44_04325 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIS44_04325 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily LIS44_04325 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIS44_04325 IPR017938 Riboflavin synthase-like beta-barrel LIS44_04325 IPR029039 Flavoprotein-like superfamily LIS44_04335 IPR010019 Integral membrane protein, YccS LIS44_04335 IPR010020 Integral membrane protein, YccS/YhfK LIS44_04335 IPR032692 Integral membrane protein YccS, N-terminal LIS44_04340 IPR004812 Drug resistance transporter Bcr/CmlA subfamily LIS44_04340 IPR011701 Major facilitator superfamily LIS44_04340 IPR020846 Major facilitator superfamily domain LIS44_04340 IPR036259 MFS transporter superfamily LIS44_04350 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LIS44_04350 IPR001423 Lysophospholipase patatin, conserved site LIS44_04350 IPR002641 Patatin-like phospholipase domain LIS44_04370 IPR006683 Thioesterase domain LIS44_04370 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase LIS44_04370 IPR029069 HotDog domain superfamily LIS44_04370 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain LIS44_04375 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIS44_04375 IPR009057 Homeobox-like domain superfamily LIS44_04375 IPR001647 DNA-binding HTH domain, TetR-type LIS44_04375 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIS44_04375 IPR011075 Tetracyclin repressor-like, C-terminal domain LIS44_04380 IPR020846 Major facilitator superfamily domain LIS44_04380 IPR036259 MFS transporter superfamily LIS44_04380 IPR011701 Major facilitator superfamily LIS44_04385 IPR005119 LysR, substrate-binding LIS44_04385 IPR000847 Transcription regulator HTH, LysR LIS44_04385 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_04385 IPR036390 Winged helix DNA-binding domain superfamily LIS44_04390 IPR036249 Thioredoxin-like superfamily LIS44_04390 IPR004046 Glutathione S-transferase, C-terminal LIS44_04390 IPR004045 Glutathione S-transferase, N-terminal LIS44_04390 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LIS44_04390 IPR010987 Glutathione S-transferase, C-terminal-like LIS44_04390 IPR040079 Glutathione Transferase family LIS44_04395 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase LIS44_04395 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_04395 IPR002938 FAD-binding domain LIS44_04405 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LIS44_04405 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LIS44_04405 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_04410 IPR011335 Restriction endonuclease type II-like LIS44_04410 IPR009822 YaeQ LIS44_04410 IPR038590 YaeQ superfamily LIS44_04415 IPR003416 MgtC/SapB/SrpB/YhiD family LIS44_04420 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LIS44_04425 IPR029787 Nucleotide cyclase LIS44_04425 IPR001633 EAL domain LIS44_04425 IPR016132 Phytochrome chromophore attachment domain LIS44_04425 IPR001294 Phytochrome LIS44_04425 IPR029016 GAF-like domain superfamily LIS44_04425 IPR000160 GGDEF domain LIS44_04425 IPR013515 Phytochrome, central region LIS44_04425 IPR035919 EAL domain superfamily LIS44_04425 IPR003018 GAF domain LIS44_04430 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB LIS44_04430 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal LIS44_04430 IPR002509 NodB homology domain LIS44_04430 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIS44_04465 IPR014748 Enoyl-CoA hydratase, C-terminal LIS44_04465 IPR001753 Enoyl-CoA hydratase/isomerase LIS44_04465 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site LIS44_04465 IPR022852 Carnitinyl-CoA dehydratase LIS44_04465 IPR029045 ClpP/crotonase-like domain superfamily LIS44_04490 IPR036821 Peptide deformylase superfamily LIS44_04490 IPR023635 Peptide deformylase LIS44_04500 IPR033416 Periplasmic sensor domain CHASE7 LIS44_04500 IPR000160 GGDEF domain LIS44_04500 IPR029787 Nucleotide cyclase LIS44_04505 IPR011005 Dihydropteroate synthase-like LIS44_04505 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily LIS44_04505 IPR004223 Vitamin B12-dependent methionine synthase, activation domain LIS44_04505 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LIS44_04505 IPR036594 Methionine synthase domain LIS44_04505 IPR006158 Cobalamin (vitamin B12)-binding domain LIS44_04505 IPR033706 Methionine synthase, B12-binding domain LIS44_04505 IPR036724 Cobalamin-binding domain superfamily LIS44_04505 IPR000489 Pterin-binding domain LIS44_04505 IPR011822 Cobalamin-dependent methionine synthase LIS44_04505 IPR036589 Homocysteine-binding domain superfamily LIS44_04505 IPR003726 Homocysteine-binding domain LIS44_04525 IPR000361 FeS cluster biogenesis LIS44_04525 IPR035903 HesB-like domain superfamily LIS44_04525 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal LIS44_04525 IPR017726 Fe/S biogenesis protein NfuA LIS44_04525 IPR034904 Fe-S cluster assembly domain superfamily LIS44_04555 IPR013830 SGNH hydrolase-type esterase domain LIS44_04555 IPR036514 SGNH hydrolase superfamily LIS44_04560 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_04560 IPR003593 AAA+ ATPase domain LIS44_04560 IPR003439 ABC transporter-like LIS44_04560 IPR017871 ABC transporter, conserved site LIS44_04565 IPR038766 Membrane component of ABC transporter, predicted LIS44_04570 IPR022764 Peptidase S54, rhomboid domain LIS44_04570 IPR035952 Rhomboid-like superfamily LIS44_04575 IPR023346 Lysozyme-like domain superfamily LIS44_04575 IPR036950 Penicillin binding protein transglycosylase domain LIS44_04575 IPR011812 Biosynthetic peptidoglycan transglycosylase LIS44_04575 IPR001264 Glycosyl transferase, family 51 LIS44_04580 IPR003414 Polyphosphate kinase LIS44_04580 IPR041108 Polyphosphate kinase, C-terminal domain 1 LIS44_04580 IPR024953 Polyphosphate kinase middle domain LIS44_04580 IPR036830 Polyphosphate kinase middle domain superfamily LIS44_04580 IPR025200 Polyphosphate kinase C-terminal domain 2 LIS44_04580 IPR025198 Polyphosphate kinase N-terminal domain LIS44_04580 IPR036832 Polyphosphate kinase N-terminal domain superfamily LIS44_04585 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_04585 IPR036390 Winged helix DNA-binding domain superfamily LIS44_04585 IPR005119 LysR, substrate-binding LIS44_04585 IPR000847 Transcription regulator HTH, LysR LIS44_04590 IPR011942 Poly(3-hydroxyalkanoate) depolymerase LIS44_04590 IPR029058 Alpha/Beta hydrolase fold LIS44_04590 IPR000073 Alpha/beta hydrolase fold-1 LIS44_04595 IPR023753 FAD/NAD(P)-binding domain LIS44_04595 IPR041364 Rubredoxin binding domain LIS44_04595 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_04600 IPR018527 Rubredoxin, iron-binding site LIS44_04600 IPR024935 Rubredoxin domain LIS44_04600 IPR024922 Rubredoxin LIS44_04600 IPR024934 Rubredoxin-like domain LIS44_04605 IPR005764 Adenine phosphoribosyl transferase LIS44_04605 IPR000836 Phosphoribosyltransferase domain LIS44_04605 IPR029057 Phosphoribosyltransferase-like LIS44_04630 IPR008526 Inner membrane protein YedI LIS44_04635 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative LIS44_04645 IPR018422 Cation/H+ exchanger, CPA1 family LIS44_04645 IPR006153 Cation/H+ exchanger LIS44_04645 IPR038770 Sodium/solute symporter superfamily LIS44_04650 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding LIS44_04650 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain LIS44_04650 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_04665 IPR018357 Hexapeptide transferase, conserved site LIS44_04665 IPR001451 Hexapeptide repeat LIS44_04665 IPR011004 Trimeric LpxA-like superfamily LIS44_04670 IPR038743 YjgH-like LIS44_04670 IPR035959 RutC-like superfamily LIS44_04670 IPR006175 YjgF/YER057c/UK114 family LIS44_04675 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIS44_04675 IPR001647 DNA-binding HTH domain, TetR-type LIS44_04675 IPR009057 Homeobox-like domain superfamily LIS44_04680 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily LIS44_04680 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal LIS44_04680 IPR006359 Transcription elongation factor GreA LIS44_04680 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily LIS44_04680 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal LIS44_04680 IPR028624 Transcription elongation factor GreA/GreB LIS44_04680 IPR023459 Transcription elongation factor GreA/GreB family LIS44_04680 IPR018151 Transcription elongation factor, GreA/GreB, conserved site LIS44_04685 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain LIS44_04685 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LIS44_04685 IPR006275 Carbamoyl-phosphate synthase, large subunit LIS44_04685 IPR011607 Methylglyoxal synthase-like domain LIS44_04685 IPR011761 ATP-grasp fold LIS44_04685 IPR036914 Methylglyoxal synthase-like domain superfamily LIS44_04685 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain LIS44_04685 IPR016185 Pre-ATP-grasp domain superfamily LIS44_04685 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily LIS44_04685 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain LIS44_04690 IPR006274 Carbamoyl-phosphate synthase, small subunit LIS44_04690 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain LIS44_04690 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain LIS44_04690 IPR017926 Glutamine amidotransferase LIS44_04690 IPR029062 Class I glutamine amidotransferase-like LIS44_04690 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily LIS44_04700 IPR001207 Transposase, mutator type LIS44_04710 IPR001890 RNA-binding, CRM domain LIS44_04710 IPR017924 RNA-binding protein YhbY LIS44_04710 IPR035920 YhbY-like superfamily LIS44_04715 IPR002877 Ribosomal RNA methyltransferase FtsJ domain LIS44_04715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_04715 IPR015507 Ribosomal RNA large subunit methyltransferase E LIS44_04720 IPR041569 AAA ATPase, AAA+ lid domain LIS44_04720 IPR037219 Peptidase M41-like LIS44_04720 IPR003959 ATPase, AAA-type, core LIS44_04720 IPR003960 ATPase, AAA-type, conserved site LIS44_04720 IPR005936 Peptidase, FtsH LIS44_04720 IPR003593 AAA+ ATPase domain LIS44_04720 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_04720 IPR011546 Peptidase M41, FtsH extracellular LIS44_04720 IPR000642 Peptidase M41 LIS44_04725 IPR000489 Pterin-binding domain LIS44_04725 IPR011005 Dihydropteroate synthase-like LIS44_04725 IPR006390 Dihydropteroate synthase LIS44_04770 IPR036390 Winged helix DNA-binding domain superfamily LIS44_04770 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_04770 IPR000847 Transcription regulator HTH, LysR LIS44_04770 IPR005119 LysR, substrate-binding LIS44_04775 IPR040442 Pyruvate kinase-like domain superfamily LIS44_04775 IPR039556 ICL/PEPM domain LIS44_04775 IPR006254 Isocitrate lyase LIS44_04775 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIS44_04780 IPR033718 Diacylglycerol kinase, prokaryotic LIS44_04780 IPR000829 DAGK family LIS44_04780 IPR036945 Diacylglycerol kinase (DAGK) superfamily LIS44_04785 IPR001036 Acriflavin resistance protein LIS44_04785 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 LIS44_04785 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LIS44_04795 IPR022919 Peptidase M48, protease HtpX, putative LIS44_04795 IPR001915 Peptidase M48 LIS44_04800 IPR011055 Duplicated hybrid motif LIS44_04800 IPR023346 Lysozyme-like domain superfamily LIS44_04800 IPR016047 Peptidase M23 LIS44_04800 IPR010090 Phage tail tape measure protein LIS44_04800 IPR000189 Prokaryotic transglycosylase, active site LIS44_04800 IPR008258 Transglycosylase SLT domain 1 LIS44_04815 IPR023346 Lysozyme-like domain superfamily LIS44_04815 IPR023703 Membrane-bound lytic murein transglycosylase F LIS44_04815 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LIS44_04815 IPR000189 Prokaryotic transglycosylase, active site LIS44_04815 IPR008258 Transglycosylase SLT domain 1 LIS44_04835 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LIS44_04835 IPR013785 Aldolase-type TIM barrel LIS44_04855 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LIS44_04855 IPR020921 Erythronate-4-phosphate dehydrogenase LIS44_04855 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain LIS44_04855 IPR036291 NAD(P)-binding domain superfamily LIS44_04855 IPR038251 PdxB, dimerisation domain superfamily LIS44_04855 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LIS44_04855 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain LIS44_04860 IPR006195 Aminoacyl-tRNA synthetase, class II LIS44_04860 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) LIS44_04860 IPR004525 Elongation factor P--(R)-beta-lysine ligase LIS44_04860 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal LIS44_04865 IPR012006 tRNA nucleotidyltransferase, proteobacteria LIS44_04865 IPR003607 HD/PDEase domain LIS44_04865 IPR002646 Poly A polymerase, head domain LIS44_04865 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LIS44_04875 IPR001633 EAL domain LIS44_04875 IPR029787 Nucleotide cyclase LIS44_04875 IPR035919 EAL domain superfamily LIS44_04875 IPR005330 MHYT domain LIS44_04875 IPR000160 GGDEF domain LIS44_04880 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIS44_04880 IPR006700 Ribosomal RNA small subunit methyltransferase E LIS44_04880 IPR015947 PUA-like superfamily LIS44_04880 IPR029028 Alpha/beta knot methyltransferases LIS44_04885 IPR029041 FAD-linked oxidoreductase-like LIS44_04885 IPR003171 Methylenetetrahydrofolate reductase LIS44_04885 IPR004620 5,10-methylenetetrahydrofolate reductase LIS44_04890 IPR000043 Adenosylhomocysteinase-like LIS44_04890 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LIS44_04890 IPR036291 NAD(P)-binding domain superfamily LIS44_04890 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site LIS44_04890 IPR042172 Adenosylhomocysteinase-like superfamily LIS44_04915 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_04915 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_04915 IPR041166 LapB, rubredoxin metal binding domain LIS44_04915 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain LIS44_04915 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_04915 IPR004504 DNA repair protein RadA LIS44_04915 IPR003593 AAA+ ATPase domain LIS44_04920 IPR004840 Amino acid permease, conserved site LIS44_04920 IPR004841 Amino acid permease/ SLC12A domain LIS44_04930 IPR000183 Ornithine/DAP/Arg decarboxylase LIS44_04930 IPR029066 PLP-binding barrel LIS44_04930 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site LIS44_04930 IPR002986 Diaminopimelate decarboxylase, LysA LIS44_04930 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal LIS44_04930 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site LIS44_04930 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LIS44_04930 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal LIS44_04935 IPR001653 Diaminopimelate epimerase, DapF LIS44_04935 IPR018510 Diaminopimelate epimerase, active site LIS44_04940 IPR029058 Alpha/Beta hydrolase fold LIS44_04940 IPR000073 Alpha/beta hydrolase fold-1 LIS44_04940 IPR011942 Poly(3-hydroxyalkanoate) depolymerase LIS44_04945 IPR013762 Integrase-like, catalytic domain superfamily LIS44_04945 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIS44_04945 IPR011931 Tyrosine recombinase XerC LIS44_04945 IPR023009 Tyrosine recombinase XerC/XerD LIS44_04945 IPR010998 Integrase/recombinase, N-terminal LIS44_04945 IPR004107 Integrase, SAM-like, N-terminal LIS44_04945 IPR002104 Integrase, catalytic domain LIS44_04955 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LIS44_04955 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LIS44_04955 IPR019888 Transcription regulator AsnC-type LIS44_04955 IPR011008 Dimeric alpha-beta barrel LIS44_04955 IPR000485 AsnC-type HTH domain LIS44_04955 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_04955 IPR036390 Winged helix DNA-binding domain superfamily LIS44_04960 IPR004778 Homoserine/Threonine efflux protein LIS44_04960 IPR001123 Amino acid exporter protein, LeuE-type LIS44_04965 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal LIS44_04965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_04965 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site LIS44_04965 IPR012255 Electron transfer flavoprotein, beta subunit LIS44_04965 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal LIS44_04975 IPR005743 DNA gyrase, subunit A LIS44_04975 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat LIS44_04975 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal LIS44_04975 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LIS44_04975 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal LIS44_04975 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta LIS44_04975 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily LIS44_04990 IPR034703 Proton/glutamate-aspartate symporter GltP LIS44_04990 IPR033380 Glutamate-aspartate symport protein GltP/GltT LIS44_04990 IPR001991 Sodium:dicarboxylate symporter LIS44_04990 IPR036458 Sodium:dicarboxylate symporter superfamily LIS44_04990 IPR018107 Sodium:dicarboxylate symporter, conserved site LIS44_05005 IPR039562 Membrane fusion protein, biotin-lipoyl like domain LIS44_05015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_05015 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_05015 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_05015 IPR022278 Phosphoserine aminotransferase LIS44_05015 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LIS44_05015 IPR000192 Aminotransferase class V domain LIS44_05030 IPR003791 Protein of unknown function UPF0178 LIS44_05035 IPR000620 EamA domain LIS44_05045 IPR025857 MacB-like periplasmic core domain LIS44_05045 IPR003838 ABC transporter permease protein domain LIS44_05045 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E LIS44_05050 IPR003593 AAA+ ATPase domain LIS44_05050 IPR003439 ABC transporter-like LIS44_05050 IPR017871 ABC transporter, conserved site LIS44_05050 IPR015854 ABC transporter, lipoprotein release, LolD LIS44_05050 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05065 IPR029045 ClpP/crotonase-like domain superfamily LIS44_05065 IPR023171 Na/H antiporter domain superfamily LIS44_05065 IPR004670 Na+/H+ antiporter NhaA LIS44_05065 IPR002142 Peptidase S49 LIS44_05075 IPR001555 Phosphoribosylglycinamide formyltransferase, active site LIS44_05075 IPR004607 Phosphoribosylglycinamide formyltransferase LIS44_05075 IPR036477 Formyl transferase, N-terminal domain superfamily LIS44_05075 IPR002376 Formyl transferase, N-terminal LIS44_05080 IPR010918 PurM-like, C-terminal domain LIS44_05080 IPR036676 PurM-like, C-terminal domain superfamily LIS44_05080 IPR016188 PurM-like, N-terminal domain LIS44_05080 IPR036921 PurM-like, N-terminal domain superfamily LIS44_05080 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase LIS44_05085 IPR002549 Transmembrane protein TqsA-like LIS44_05090 IPR010921 Trp repressor/replication initiator LIS44_05090 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05090 IPR038454 DnaA, N-terminal domain superfamily LIS44_05090 IPR024633 DnaA N-terminal domain LIS44_05090 IPR018312 Chromosomal replication control, initiator DnaA, conserved site LIS44_05090 IPR013317 Chromosomal replication initiator protein DnaA LIS44_05090 IPR003593 AAA+ ATPase domain LIS44_05090 IPR020591 Chromosomal replication control, initiator DnaA-like LIS44_05090 IPR001957 Chromosomal replication control, initiator DnaA LIS44_05090 IPR013159 Chromosomal replication initiator, DnaA C-terminal LIS44_05120 IPR029028 Alpha/beta knot methyltransferases LIS44_05120 IPR029064 50S ribosomal protein L30e-like LIS44_05120 IPR001537 tRNA/rRNA methyltransferase, SpoU type LIS44_05120 IPR013123 RNA 2-O ribose methyltransferase, substrate binding LIS44_05120 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIS44_05125 IPR028343 Fructose-1,6-bisphosphatase LIS44_05125 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal LIS44_05125 IPR000146 Fructose-1,6-bisphosphatase class 1 LIS44_05135 IPR006664 Outer membrane protein, bacterial LIS44_05135 IPR006665 OmpA-like domain LIS44_05135 IPR006690 Outer membrane protein, OmpA-like, conserved site LIS44_05135 IPR036737 OmpA-like domain superfamily LIS44_05135 IPR039001 Peptidoglycan-associated lipoprotein LIS44_05135 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal LIS44_05140 IPR036752 TolB, N-terminal domain superfamily LIS44_05140 IPR007195 TolB, N-terminal LIS44_05140 IPR011659 WD40-like Beta Propeller LIS44_05140 IPR014167 Tol-Pal system protein TolB LIS44_05140 IPR011042 Six-bladed beta-propeller, TolB-like LIS44_05150 IPR014168 Tol-Pal system protein TolR LIS44_05150 IPR003400 Biopolymer transport protein ExbD/TolR LIS44_05155 IPR002898 MotA/TolQ/ExbB proton channel LIS44_05155 IPR014163 Tol-Pal system, TolQ LIS44_05160 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site LIS44_05160 IPR029069 HotDog domain superfamily LIS44_05160 IPR006683 Thioesterase domain LIS44_05160 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase LIS44_05160 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family LIS44_05165 IPR011650 Peptidase M20, dimerisation domain LIS44_05165 IPR017439 Amidohydrolase LIS44_05165 IPR036264 Bacterial exopeptidase dimerisation domain LIS44_05165 IPR002933 Peptidase M20 LIS44_05180 IPR003593 AAA+ ATPase domain LIS44_05180 IPR041445 RuvB, AAA lid domain LIS44_05180 IPR004605 DNA helicase, Holliday junction RuvB-type LIS44_05180 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05180 IPR008824 RuvB-like P-loop domain LIS44_05180 IPR008823 RuvB C-terminal winged helix domain LIS44_05180 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_05180 IPR036390 Winged helix DNA-binding domain superfamily LIS44_05185 IPR011114 Holliday junction DNA helicase RuvA, C-terminal LIS44_05185 IPR036267 RuvA, C-terminal domain superfamily LIS44_05185 IPR010994 RuvA domain 2-like LIS44_05185 IPR012340 Nucleic acid-binding, OB-fold LIS44_05185 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 LIS44_05185 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial LIS44_05185 IPR000085 Bacterial DNA recombination protein RuvA LIS44_05190 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily LIS44_05190 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal LIS44_05190 IPR006261 dNTP triphosphohydrolase LIS44_05190 IPR023024 dNTP triphosphohydrolase, type 3 LIS44_05190 IPR003607 HD/PDEase domain LIS44_05190 IPR006674 HD domain LIS44_05205 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LIS44_05205 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily LIS44_05205 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria LIS44_05205 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LIS44_05210 IPR029479 Nitroreductase LIS44_05210 IPR000415 Nitroreductase-like LIS44_05215 IPR029045 ClpP/crotonase-like domain superfamily LIS44_05215 IPR001753 Enoyl-CoA hydratase/isomerase LIS44_05215 IPR014748 Enoyl-CoA hydratase, C-terminal LIS44_05220 IPR004821 Cytidyltransferase-like domain LIS44_05220 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain LIS44_05220 IPR015797 NUDIX hydrolase-like domain superfamily LIS44_05220 IPR020084 NUDIX hydrolase, conserved site LIS44_05220 IPR000086 NUDIX hydrolase domain LIS44_05220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_05225 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LIS44_05225 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily LIS44_05225 IPR023480 Uncharacterised protein family UPF0312/YceI LIS44_05230 IPR017685 HTH-type transcriptional regulator ArgP LIS44_05230 IPR036390 Winged helix DNA-binding domain superfamily LIS44_05230 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_05230 IPR000847 Transcription regulator HTH, LysR LIS44_05230 IPR005119 LysR, substrate-binding LIS44_05230 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria LIS44_05235 IPR004777 L-lysine exporter/arginine exporter LIS44_05235 IPR001123 Amino acid exporter protein, LeuE-type LIS44_05240 IPR013766 Thioredoxin domain LIS44_05240 IPR036249 Thioredoxin-like superfamily LIS44_05240 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIS44_05255 IPR007197 Radical SAM LIS44_05255 IPR013785 Aldolase-type TIM barrel LIS44_05255 IPR024924 7-carboxy-7-deazaguanine synthase-like LIS44_05260 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family LIS44_05260 IPR011004 Trimeric LpxA-like superfamily LIS44_05260 IPR001451 Hexapeptide repeat LIS44_05260 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 LIS44_05260 IPR018357 Hexapeptide transferase, conserved site LIS44_05260 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily LIS44_05275 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain LIS44_05275 IPR005119 LysR, substrate-binding LIS44_05275 IPR000847 Transcription regulator HTH, LysR LIS44_05275 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_05275 IPR036390 Winged helix DNA-binding domain superfamily LIS44_05280 IPR024765 TOBE-like domain LIS44_05280 IPR005666 Sulphate transport system permease protein 1 LIS44_05280 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05280 IPR008995 Molybdate/tungstate binding, C-terminal LIS44_05280 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal LIS44_05280 IPR003593 AAA+ ATPase domain LIS44_05280 IPR017871 ABC transporter, conserved site LIS44_05280 IPR003439 ABC transporter-like LIS44_05285 IPR011866 Sulphate ABC transporter, permease protein CysW LIS44_05285 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_05285 IPR035906 MetI-like superfamily LIS44_05285 IPR005667 Sulphate ABC transporter permease protein 2 LIS44_05290 IPR005667 Sulphate ABC transporter permease protein 2 LIS44_05290 IPR035906 MetI-like superfamily LIS44_05290 IPR011865 Sulphate ABC transporter, permease protein CysT LIS44_05290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_05300 IPR000957 Sulphate/thiosulphate-binding, conserved site LIS44_05300 IPR034408 Sulphate/thiosulphate-binding site LIS44_05300 IPR005669 Thiosulphate/Sulfate-binding protein LIS44_05315 IPR003770 Endolytic murein transglycosylase LIS44_05320 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05320 IPR039430 Thymidylate kinase-like domain LIS44_05320 IPR018094 Thymidylate kinase LIS44_05330 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily LIS44_05330 IPR005288 L-aspartate oxidase LIS44_05330 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily LIS44_05330 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_05330 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LIS44_05330 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal LIS44_05335 IPR001478 PDZ domain LIS44_05335 IPR036034 PDZ superfamily LIS44_05335 IPR011782 Peptidase S1C, Do LIS44_05335 IPR009003 Peptidase S1, PA clan LIS44_05335 IPR001940 Peptidase S1C LIS44_05345 IPR000795 Transcription factor, GTP-binding domain LIS44_05345 IPR005225 Small GTP-binding protein domain LIS44_05345 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05345 IPR035654 Elongation factor 4, domain IV LIS44_05345 IPR031157 Tr-type G domain, conserved site LIS44_05345 IPR038363 LepA, C-terminal domain superfamily LIS44_05345 IPR004161 Translation elongation factor EFTu-like, domain 2 LIS44_05345 IPR000640 Elongation factor EFG, domain V-like LIS44_05345 IPR035647 EF-G domain III/V-like LIS44_05345 IPR006297 Elongation factor 4 LIS44_05345 IPR013842 GTP-binding protein LepA, C-terminal LIS44_05350 IPR019533 Peptidase S26 LIS44_05350 IPR019756 Peptidase S26A, signal peptidase I, serine active site LIS44_05350 IPR036286 LexA/Signal peptidase-like superfamily LIS44_05350 IPR019758 Peptidase S26A, signal peptidase I, conserved site LIS44_05350 IPR000223 Peptidase S26A, signal peptidase I LIS44_05350 IPR019757 Peptidase S26A, signal peptidase I, lysine active site LIS44_05360 IPR014720 Double-stranded RNA-binding domain LIS44_05360 IPR011907 Ribonuclease III LIS44_05360 IPR000999 Ribonuclease III domain LIS44_05360 IPR036389 Ribonuclease III, endonuclease domain superfamily LIS44_05365 IPR005225 Small GTP-binding protein domain LIS44_05365 IPR009019 K homology domain superfamily, prokaryotic type LIS44_05365 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05365 IPR015946 K homology domain-like, alpha/beta LIS44_05365 IPR006073 GTP binding domain LIS44_05365 IPR005662 GTP-binding protein Era LIS44_05365 IPR030388 Era-type guanine nucleotide-binding (G) domain LIS44_05365 IPR004044 K Homology domain, type 2 LIS44_05375 IPR037278 ARFGAP/RecO-like zinc finger LIS44_05375 IPR022572 DNA replication/recombination mediator RecO, N-terminal LIS44_05375 IPR012340 Nucleic acid-binding, OB-fold LIS44_05375 IPR003717 Recombination protein O, RecO LIS44_05385 IPR012347 Ferritin-like LIS44_05385 IPR009078 Ferritin-like superfamily LIS44_05385 IPR010386 tRNA-hydroxylase MiaE LIS44_05390 IPR007197 Radical SAM LIS44_05390 IPR013785 Aldolase-type TIM barrel LIS44_05390 IPR006638 Elp3/MiaB/NifB LIS44_05390 IPR003698 Lipoyl synthase LIS44_05395 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_05395 IPR022962 Soluble pyridine nucleotide transhydrogenase LIS44_05395 IPR023753 FAD/NAD(P)-binding domain LIS44_05395 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LIS44_05395 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIS44_05395 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIS44_05405 IPR014047 Chromate transporter, long chain LIS44_05405 IPR003370 Chromate transporter LIS44_05410 IPR006189 CHASE domain LIS44_05410 IPR042098 Taurine dioxygenase TauD-like superfamily LIS44_05410 IPR003819 TauD/TfdA-like domain LIS44_05430 IPR013656 PAS fold-4 LIS44_05430 IPR035965 PAS domain superfamily LIS44_05430 IPR029787 Nucleotide cyclase LIS44_05430 IPR000160 GGDEF domain LIS44_05430 IPR000700 PAS-associated, C-terminal LIS44_05430 IPR000014 PAS domain LIS44_05440 IPR006935 Helicase/UvrB, N-terminal LIS44_05440 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIS44_05440 IPR001650 Helicase, C-terminal LIS44_05440 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05440 IPR001943 UVR domain LIS44_05440 IPR004807 UvrABC system, subunit B LIS44_05440 IPR041471 UvrB, interaction domain LIS44_05440 IPR024759 UvrB, YAD/RRR-motif-containing domain LIS44_05440 IPR036876 UVR domain superfamily LIS44_05450 IPR000620 EamA domain LIS44_05450 IPR004626 RarD protein LIS44_05455 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site LIS44_05455 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain LIS44_05455 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain LIS44_05455 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I LIS44_05455 IPR036291 NAD(P)-binding domain superfamily LIS44_05455 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family LIS44_05460 IPR002577 Helix-turn-helix, HxlR type LIS44_05460 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_05460 IPR036390 Winged helix DNA-binding domain superfamily LIS44_05465 IPR011701 Major facilitator superfamily LIS44_05465 IPR020846 Major facilitator superfamily domain LIS44_05465 IPR036259 MFS transporter superfamily LIS44_05470 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05470 IPR006073 GTP binding domain LIS44_05470 IPR036726 GTP1/OBG domain superfamily LIS44_05470 IPR031167 OBG-type guanine nucleotide-binding (G) domain LIS44_05470 IPR006074 GTP1/OBG, conserved site LIS44_05470 IPR014100 GTP-binding protein Obg/CgtA LIS44_05470 IPR035101 GTP-binding protein, Obg-type LIS44_05470 IPR006169 GTP1/OBG domain LIS44_05475 IPR019797 Glutamate 5-kinase, conserved site LIS44_05475 IPR036974 PUA domain superfamily LIS44_05475 IPR015947 PUA-like superfamily LIS44_05475 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase LIS44_05475 IPR002478 PUA domain LIS44_05475 IPR001057 Glutamate/acetylglutamate kinase LIS44_05475 IPR036393 Acetylglutamate kinase-like superfamily LIS44_05475 IPR041739 Glutamate-5-kinase domain LIS44_05475 IPR001048 Aspartate/glutamate/uridylate kinase LIS44_05475 IPR011529 Glutamate 5-kinase LIS44_05480 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LIS44_05480 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LIS44_05480 IPR033879 Undecaprenyl-diphosphatase LIS44_05490 IPR005814 Aminotransferase class-III LIS44_05490 IPR004637 2,4-diaminobutyrate 4-transaminase LIS44_05490 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_05490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_05490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_05495 IPR021115 Pyridoxal-phosphate binding site LIS44_05495 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_05495 IPR002129 Pyridoxal phosphate-dependent decarboxylase LIS44_05495 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_05500 IPR024370 PBP domain LIS44_05500 IPR011862 Phosphate binding protein LIS44_05505 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_05505 IPR035906 MetI-like superfamily LIS44_05505 IPR011864 Phosphate ABC transporter, permease protein PstC LIS44_05510 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_05510 IPR035906 MetI-like superfamily LIS44_05510 IPR005672 Phosphate transport system permease protein PstA LIS44_05535 IPR013539 Adenylosuccinate lyase PurB, C-terminal LIS44_05535 IPR004769 Adenylosuccinate lyase LIS44_05535 IPR008948 L-Aspartase-like LIS44_05535 IPR020557 Fumarate lyase, conserved site LIS44_05535 IPR000362 Fumarate lyase family LIS44_05535 IPR022761 Fumarate lyase, N-terminal LIS44_05535 IPR024083 Fumarase/histidase, N-terminal LIS44_05545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_05545 IPR004506 tRNA-specific 2-thiouridylase LIS44_05545 IPR023382 Adenine nucleotide alpha hydrolase-like domains LIS44_05550 IPR020476 NUDIX hydrolase LIS44_05550 IPR015797 NUDIX hydrolase-like domain superfamily LIS44_05550 IPR020084 NUDIX hydrolase, conserved site LIS44_05550 IPR000086 NUDIX hydrolase domain LIS44_05550 IPR033713 Phosphatase NudJ LIS44_05570 IPR001451 Hexapeptide repeat LIS44_05570 IPR011004 Trimeric LpxA-like superfamily LIS44_05575 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIS44_05575 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily LIS44_05575 IPR012338 Beta-lactamase/transpeptidase-like LIS44_05575 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIS44_05575 IPR015956 Penicillin-binding protein, C-terminal domain superfamily LIS44_05575 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIS44_05590 IPR030048 Survival protein SurE LIS44_05590 IPR002828 Survival protein SurE-like phosphatase/nucleotidase LIS44_05590 IPR036523 SurE-like phosphatase/nucleotidase superfamily LIS44_05595 IPR016047 Peptidase M23 LIS44_05595 IPR036779 LysM domain superfamily LIS44_05595 IPR018392 LysM domain LIS44_05595 IPR011055 Duplicated hybrid motif LIS44_05600 IPR036390 Winged helix DNA-binding domain superfamily LIS44_05600 IPR005119 LysR, substrate-binding LIS44_05600 IPR000847 Transcription regulator HTH, LysR LIS44_05600 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_05605 IPR004636 Acetylornithine/Succinylornithine transaminase family LIS44_05605 IPR005814 Aminotransferase class-III LIS44_05605 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_05605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_05605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_05610 IPR036249 Thioredoxin-like superfamily LIS44_05610 IPR004480 Monothiol glutaredoxin-related LIS44_05610 IPR002109 Glutaredoxin LIS44_05610 IPR014434 Monothiol glutaredoxin LIS44_05610 IPR033658 Glutaredoxin, PICOT-like LIS44_05615 IPR041699 Lon protease, AAA domain LIS44_05615 IPR008269 Peptidase S16, Lon proteolytic domain LIS44_05615 IPR027065 Lon protease LIS44_05615 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_05615 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_05620 IPR020846 Major facilitator superfamily domain LIS44_05620 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 LIS44_05620 IPR011701 Major facilitator superfamily LIS44_05620 IPR036259 MFS transporter superfamily LIS44_05625 IPR037523 Vicinal oxygen chelate (VOC) domain LIS44_05625 IPR018146 Glyoxalase I, conserved site LIS44_05625 IPR004361 Glyoxalase I LIS44_05625 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIS44_05625 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIS44_05635 IPR034704 L28p-like LIS44_05635 IPR027491 Ribosomal protein L31 type A LIS44_05635 IPR042105 Ribosomal protein L31 superfamily LIS44_05635 IPR002150 Ribosomal protein L31 LIS44_05650 IPR013785 Aldolase-type TIM barrel LIS44_05650 IPR022462 Lysine-2,3-aminomutase-like LIS44_05650 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase LIS44_05650 IPR007197 Radical SAM LIS44_05660 IPR025299 CstA, C-terminal domain LIS44_05660 IPR003706 CstA, N-terminal domain LIS44_05670 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05670 IPR041628 ChlI/MoxR, AAA lid domain LIS44_05670 IPR011703 ATPase, AAA-3 LIS44_05680 IPR025403 Domain of unknown function DUF4129 LIS44_05680 IPR038765 Papain-like cysteine peptidase superfamily LIS44_05680 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal LIS44_05680 IPR002931 Transglutaminase-like LIS44_05690 IPR002104 Integrase, catalytic domain LIS44_05690 IPR010998 Integrase/recombinase, N-terminal LIS44_05690 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIS44_05690 IPR013762 Integrase-like, catalytic domain superfamily LIS44_05700 IPR024473 Transposase, IS4, N-terminal LIS44_05700 IPR012337 Ribonuclease H-like superfamily LIS44_05700 IPR002559 Transposase, IS4-like LIS44_05705 IPR012337 Ribonuclease H-like superfamily LIS44_05705 IPR002559 Transposase, IS4-like LIS44_05705 IPR024473 Transposase, IS4, N-terminal LIS44_05760 IPR036249 Thioredoxin-like superfamily LIS44_05760 IPR012336 Thioredoxin-like fold LIS44_05760 IPR012081 Alkyl hydroperoxide reductase subunit F LIS44_05760 IPR002109 Glutaredoxin LIS44_05760 IPR023753 FAD/NAD(P)-binding domain LIS44_05760 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_05760 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site LIS44_05765 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIS44_05765 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIS44_05770 IPR032525 Peptidase family U32, C-terminal LIS44_05770 IPR001539 Peptidase U32 LIS44_05775 IPR000551 MerR-type HTH domain LIS44_05775 IPR009061 Putative DNA-binding domain superfamily LIS44_05775 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator LIS44_05790 IPR033892 Ferredoxin--NADP reductase, bacteria LIS44_05790 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIS44_05790 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIS44_05790 IPR017938 Riboflavin synthase-like beta-barrel LIS44_05790 IPR017927 FAD-binding domain, ferredoxin reductase-type LIS44_05790 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LIS44_05790 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIS44_05795 IPR023370 TrmO-like, N-terminal domain LIS44_05795 IPR041369 TrmO, C-terminal LIS44_05795 IPR023368 Uncharacterised protein family UPF0066, conserved site LIS44_05795 IPR040372 YaeB-like LIS44_05795 IPR036413 YaeB-like superfamily LIS44_05795 IPR036414 YaeB, N-terminal domain superfamily LIS44_05805 IPR042181 Type II secretion system, protein E, N-terminal LIS44_05805 IPR001482 Type II/IV secretion system protein LIS44_05805 IPR037257 General secretory system II, protein E, N-terminal superfamily LIS44_05805 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05805 IPR003593 AAA+ ATPase domain LIS44_05805 IPR013369 Type II secretion system GspE LIS44_05815 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_05815 IPR039420 Transcriptional regulatory protein WalR-like LIS44_05815 IPR001789 Signal transduction response regulator, receiver domain LIS44_05815 IPR001867 OmpR/PhoB-type DNA-binding domain LIS44_05815 IPR016032 Signal transduction response regulator, C-terminal effector LIS44_05815 IPR011006 CheY-like superfamily LIS44_05820 IPR013727 Two-component sensor kinase, N-terminal LIS44_05820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_05820 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_05820 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_05820 IPR005467 Histidine kinase domain LIS44_05820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_05820 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_05820 IPR003660 HAMP domain LIS44_05830 IPR020476 NUDIX hydrolase LIS44_05830 IPR015797 NUDIX hydrolase-like domain superfamily LIS44_05830 IPR020084 NUDIX hydrolase, conserved site LIS44_05830 IPR000086 NUDIX hydrolase domain LIS44_05830 IPR003561 Mutator MutT LIS44_05840 IPR011813 Penicillin-binding protein 1B LIS44_05840 IPR028166 Bifunctional transglycosylase second domain LIS44_05840 IPR023346 Lysozyme-like domain superfamily LIS44_05840 IPR001264 Glycosyl transferase, family 51 LIS44_05840 IPR012338 Beta-lactamase/transpeptidase-like LIS44_05840 IPR036950 Penicillin binding protein transglycosylase domain LIS44_05840 IPR001460 Penicillin-binding protein, transpeptidase LIS44_05845 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily LIS44_05845 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal LIS44_05845 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal LIS44_05845 IPR002504 NAD kinase LIS44_05850 IPR009749 Protein of unknown function DUF1315 LIS44_05855 IPR005940 Anthranilate phosphoribosyl transferase LIS44_05855 IPR017459 Glycosyl transferase family 3, N-terminal domain LIS44_05855 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LIS44_05855 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LIS44_05855 IPR000312 Glycosyl transferase, family 3 LIS44_05860 IPR023954 C4-dicarboxylate transport protein LIS44_05860 IPR001991 Sodium:dicarboxylate symporter LIS44_05860 IPR036458 Sodium:dicarboxylate symporter superfamily LIS44_05860 IPR018107 Sodium:dicarboxylate symporter, conserved site LIS44_05865 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_05865 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_05865 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_05865 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_05865 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_05865 IPR006089 Acyl-CoA dehydrogenase, conserved site LIS44_05865 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_05870 IPR006286 Deglycase PfpI LIS44_05870 IPR029062 Class I glutamine amidotransferase-like LIS44_05870 IPR002818 DJ-1/PfpI LIS44_05875 IPR036263 Chorismate mutase type II superfamily LIS44_05875 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase LIS44_05875 IPR002912 ACT domain LIS44_05875 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain LIS44_05875 IPR001086 Prephenate dehydratase LIS44_05875 IPR036979 Chorismate mutase domain superfamily LIS44_05875 IPR018528 Prephenate dehydratase, conserved site LIS44_05875 IPR002701 Chorismate mutase II, prokaryotic-type LIS44_05880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_05880 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site LIS44_05880 IPR004839 Aminotransferase, class I/classII LIS44_05880 IPR005861 Histidinol-phosphate aminotransferase family LIS44_05880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_05880 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_05885 IPR036968 Enolpyruvate transferase domain superfamily LIS44_05885 IPR001986 Enolpyruvate transferase domain LIS44_05885 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase LIS44_05885 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site LIS44_05885 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta LIS44_05900 IPR005583 Peroxide stress protein YaaA LIS44_05910 IPR026033 Azaguanine-like transporters LIS44_05910 IPR006043 Xanthine/uracil/vitamin C permease LIS44_05915 IPR001365 Adenosine/AMP deaminase domain LIS44_05915 IPR028892 Adenine deaminase type 2 LIS44_05915 IPR006330 Adenosine/adenine deaminase LIS44_05915 IPR032466 Metal-dependent hydrolase LIS44_05925 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase LIS44_05925 IPR016174 Di-haem cytochrome, transmembrane LIS44_05935 IPR001352 Ribonuclease HII/HIII LIS44_05935 IPR012337 Ribonuclease H-like superfamily LIS44_05935 IPR024567 Ribonuclease HII/HIII domain LIS44_05935 IPR022898 Ribonuclease HII LIS44_05935 IPR036397 Ribonuclease H superfamily LIS44_05940 IPR003751 Translational regulator CsrA LIS44_05940 IPR036107 Carbon storage regulator superfamily LIS44_05945 IPR018042 Aspartate kinase, conserved site LIS44_05945 IPR027795 CASTOR, ACT domain LIS44_05945 IPR005260 Aspartate kinase, monofunctional class LIS44_05945 IPR001048 Aspartate/glutamate/uridylate kinase LIS44_05945 IPR036393 Acetylglutamate kinase-like superfamily LIS44_05945 IPR001341 Aspartate kinase LIS44_05945 IPR002912 ACT domain LIS44_05945 IPR041740 Aspartokinase catalytic domain LIS44_05950 IPR002318 Alanine-tRNA ligase, class IIc LIS44_05950 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily LIS44_05950 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain LIS44_05950 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal LIS44_05950 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria LIS44_05950 IPR003156 DHHA1 domain LIS44_05950 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LIS44_05950 IPR009000 Translation protein, beta-barrel domain superfamily LIS44_05950 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LIS44_05955 IPR036291 NAD(P)-binding domain superfamily LIS44_05955 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site LIS44_05955 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain LIS44_05955 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain LIS44_05955 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family LIS44_05955 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I LIS44_05965 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain LIS44_05965 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit LIS44_05965 IPR004517 ATP phosphoribosyltransferase regulatory subunit LIS44_05970 IPR001114 Adenylosuccinate synthetase LIS44_05970 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_05970 IPR042110 Adenylosuccinate synthetase, domain 2 LIS44_05970 IPR033128 Adenylosuccinate synthase, active site LIS44_05970 IPR042109 Adenylosuccinate synthetase, domain 1 LIS44_05970 IPR042111 Adenylosuccinate synthetase, domain 3 LIS44_05970 IPR018220 Adenylosuccinate synthase, GTP-binding site LIS44_05985 IPR036812 NADP-dependent oxidoreductase domain superfamily LIS44_05985 IPR023210 NADP-dependent oxidoreductase domain LIS44_05985 IPR020471 Aldo/keto reductase LIS44_05990 IPR018488 Cyclic nucleotide-binding, conserved site LIS44_05990 IPR000595 Cyclic nucleotide-binding domain LIS44_05990 IPR012318 Crp-type HTH domain LIS44_05990 IPR014710 RmlC-like jelly roll fold LIS44_05990 IPR018335 Transcription regulator HTH, Crp-type, conserved site LIS44_05990 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_05990 IPR036390 Winged helix DNA-binding domain superfamily LIS44_05990 IPR018490 Cyclic nucleotide-binding-like LIS44_05995 IPR003718 OsmC/Ohr family LIS44_05995 IPR015946 K homology domain-like, alpha/beta LIS44_05995 IPR036102 OsmC/Ohr superfamily LIS44_06000 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06000 IPR041546 ClpA/ClpB, AAA lid domain LIS44_06000 IPR018368 ClpA/B, conserved site 1 LIS44_06000 IPR028299 ClpA/B, conserved site 2 LIS44_06000 IPR004176 Clp, N-terminal LIS44_06000 IPR003593 AAA+ ATPase domain LIS44_06000 IPR001270 ClpA/B family LIS44_06000 IPR003959 ATPase, AAA-type, core LIS44_06000 IPR036628 Clp, N-terminal domain superfamily LIS44_06000 IPR017730 Chaperonin ClpB LIS44_06000 IPR019489 Clp ATPase, C-terminal LIS44_06015 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LIS44_06015 IPR017244 Ribosomal RNA large subunit methyltransferase K/L LIS44_06015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_06015 IPR019614 S-adenosylmethionine-dependent methyltransferase LIS44_06015 IPR000241 Putative RNA methylase domain LIS44_06015 IPR004114 THUMP domain LIS44_06020 IPR027806 Harbinger transposase-derived nuclease domain LIS44_06020 IPR027805 Transposase, Helix-turn-helix domain LIS44_06035 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LIS44_06035 IPR006130 Aspartate/ornithine carbamoyltransferase LIS44_06035 IPR002082 Aspartate carbamoyltransferase LIS44_06035 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LIS44_06035 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LIS44_06040 IPR006680 Amidohydrolase-related LIS44_06040 IPR004722 Dihydroorotase LIS44_06040 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIS44_06040 IPR032466 Metal-dependent hydrolase LIS44_06045 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LIS44_06045 IPR006664 Outer membrane protein, bacterial LIS44_06045 IPR006690 Outer membrane protein, OmpA-like, conserved site LIS44_06045 IPR036737 OmpA-like domain superfamily LIS44_06045 IPR008722 Outer membrane porin F, N-terminal LIS44_06045 IPR006665 OmpA-like domain LIS44_06060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_06060 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type LIS44_06065 IPR018045 Sulphate anion transporter, conserved site LIS44_06065 IPR036513 STAS domain superfamily LIS44_06065 IPR011547 SLC26A/SulP transporter domain LIS44_06065 IPR001902 SLC26A/SulP transporter LIS44_06065 IPR002645 STAS domain LIS44_06070 IPR010987 Glutathione S-transferase, C-terminal-like LIS44_06070 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LIS44_06070 IPR040079 Glutathione Transferase family LIS44_06070 IPR004045 Glutathione S-transferase, N-terminal LIS44_06070 IPR004046 Glutathione S-transferase, C-terminal LIS44_06070 IPR036249 Thioredoxin-like superfamily LIS44_06080 IPR007138 Antibiotic biosynthesis monooxygenase domain LIS44_06080 IPR011008 Dimeric alpha-beta barrel LIS44_06085 IPR013785 Aldolase-type TIM barrel LIS44_06085 IPR033983 Thiazole synthase ThiG LIS44_06085 IPR008867 Thiazole synthase LIS44_06095 IPR006696 Protein of unknown function DUF423 LIS44_06100 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria LIS44_06100 IPR013325 RNA polymerase sigma factor, region 2 LIS44_06100 IPR013324 RNA polymerase sigma factor, region 3/4-like LIS44_06100 IPR007627 RNA polymerase sigma-70 region 2 LIS44_06100 IPR014284 RNA polymerase sigma-70 like domain LIS44_06100 IPR007630 RNA polymerase sigma-70 region 4 LIS44_06100 IPR009042 RNA polymerase sigma-70 region 1.2 LIS44_06100 IPR000943 RNA polymerase sigma-70 LIS44_06110 IPR012156 Cold shock, CspA LIS44_06110 IPR011129 Cold shock domain LIS44_06110 IPR019844 Cold-shock (CSD) domain LIS44_06110 IPR002059 Cold-shock protein, DNA-binding LIS44_06110 IPR012340 Nucleic acid-binding, OB-fold LIS44_06115 IPR014014 RNA helicase, DEAD-box type, Q motif LIS44_06115 IPR023554 ATP-dependent RNA helicase RhlB type LIS44_06115 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06115 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIS44_06115 IPR011545 DEAD/DEAH box helicase domain LIS44_06115 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LIS44_06115 IPR001650 Helicase, C-terminal LIS44_06125 IPR029479 Nitroreductase LIS44_06125 IPR000415 Nitroreductase-like LIS44_06125 IPR026021 Putative NAD(P)H nitroreductase YdjA-like LIS44_06130 IPR036291 NAD(P)-binding domain superfamily LIS44_06130 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal LIS44_06130 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent LIS44_06130 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIS44_06130 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_06130 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal LIS44_06150 IPR001295 Dihydroorotate dehydrogenase, conserved site LIS44_06150 IPR013785 Aldolase-type TIM barrel LIS44_06150 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 LIS44_06150 IPR005719 Dihydroorotate dehydrogenase, class 2 LIS44_06150 IPR005720 Dihydroorotate dehydrogenase domain LIS44_06160 IPR000836 Phosphoribosyltransferase domain LIS44_06160 IPR029057 Phosphoribosyltransferase-like LIS44_06160 IPR005854 Amidophosphoribosyltransferase LIS44_06160 IPR035584 Amidophosphoribosyltransferase, N-terminal LIS44_06160 IPR017932 Glutamine amidotransferase type 2 domain LIS44_06160 IPR029055 Nucleophile aminohydrolases, N-terminal LIS44_06180 IPR001915 Peptidase M48 LIS44_06180 IPR013026 Tetratricopeptide repeat-containing domain LIS44_06180 IPR011990 Tetratricopeptide-like helical domain superfamily LIS44_06180 IPR019734 Tetratricopeptide repeat LIS44_06180 IPR030873 Beta-barrel assembly-enhancing protease LIS44_06195 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like LIS44_06195 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 LIS44_06195 IPR019004 Uncharacterised protein YqeY/Aim41 LIS44_06195 IPR042184 YqeY/Aim41, N-terminal domain LIS44_06200 IPR038380 Ribosomal protein S21 superfamily LIS44_06200 IPR018278 Ribosomal protein S21, conserved site LIS44_06200 IPR001911 Ribosomal protein S21 LIS44_06205 IPR000905 Gcp-like domain LIS44_06205 IPR017860 Peptidase M22, conserved site LIS44_06205 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD LIS44_06205 IPR017861 Kae1/TsaD family LIS44_06220 IPR011009 Protein kinase-like domain superfamily LIS44_06220 IPR005543 PASTA domain LIS44_06220 IPR000719 Protein kinase domain LIS44_06220 IPR017441 Protein kinase, ATP binding site LIS44_06220 IPR008271 Serine/threonine-protein kinase, active site LIS44_06255 IPR001279 Metallo-beta-lactamase LIS44_06255 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIS44_06255 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain LIS44_06255 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain LIS44_06255 IPR017782 Hydroxyacylglutathione hydrolase LIS44_06265 IPR003719 Phenazine biosynthesis PhzF protein LIS44_06270 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LIS44_06270 IPR011765 Peptidase M16, N-terminal LIS44_06270 IPR001431 Peptidase M16, zinc-binding site LIS44_06270 IPR007863 Peptidase M16, C-terminal LIS44_06295 IPR033469 CYTH-like domain superfamily LIS44_06295 IPR023577 CYTH domain LIS44_06295 IPR039013 Inorganic triphosphatase YgiF LIS44_06305 IPR022998 Thiamine phosphate synthase/TenI LIS44_06305 IPR013785 Aldolase-type TIM barrel LIS44_06305 IPR036206 Thiamin phosphate synthase superfamily LIS44_06305 IPR034291 Thiamine phosphate synthase LIS44_06310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_06310 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase LIS44_06310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_06310 IPR005814 Aminotransferase class-III LIS44_06310 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_06315 IPR005624 Haem-degrading LIS44_06315 IPR038084 GlcG-like domain superfamily LIS44_06325 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIS44_06325 IPR006145 Pseudouridine synthase, RsuA/RluA LIS44_06325 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LIS44_06330 IPR040765 RapA, N-terminal Tudor like domain 1 LIS44_06330 IPR023949 RNA polymerase-associated protein RapA LIS44_06330 IPR001650 Helicase, C-terminal LIS44_06330 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIS44_06330 IPR040766 RapA, N-terminal Tudor-like domain 2 LIS44_06330 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06330 IPR000330 SNF2-related, N-terminal domain LIS44_06330 IPR038718 SNF2-like, N-terminal domain superfamily LIS44_06330 IPR022737 RNA polymerase recycling, bacterial, C-terminal LIS44_06345 IPR023764 Transcriptional repressor HTH, FabR LIS44_06345 IPR009057 Homeobox-like domain superfamily LIS44_06345 IPR001647 DNA-binding HTH domain, TetR-type LIS44_06350 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIS44_06350 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LIS44_06350 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIS44_06350 IPR017927 FAD-binding domain, ferredoxin reductase-type LIS44_06350 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIS44_06350 IPR012675 Beta-grasp domain superfamily LIS44_06350 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LIS44_06350 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LIS44_06350 IPR036010 2Fe-2S ferredoxin-like superfamily LIS44_06350 IPR017938 Riboflavin synthase-like beta-barrel LIS44_06355 IPR005804 Fatty acid desaturase domain LIS44_06365 IPR011673 Protein of unknown function DUF1615 LIS44_06370 IPR013785 Aldolase-type TIM barrel LIS44_06370 IPR032887 tRNA-dihydrouridine synthase B LIS44_06370 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal LIS44_06370 IPR018517 tRNA-dihydrouridine synthase, conserved site LIS44_06370 IPR035587 DUS-like, FMN-binding domain LIS44_06370 IPR001269 tRNA-dihydrouridine synthase LIS44_06370 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 LIS44_06380 IPR013785 Aldolase-type TIM barrel LIS44_06380 IPR004136 Nitronate monooxygenase LIS44_06415 IPR036249 Thioredoxin-like superfamily LIS44_06415 IPR012336 Thioredoxin-like fold LIS44_06415 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site LIS44_06415 IPR002109 Glutaredoxin LIS44_06415 IPR023753 FAD/NAD(P)-binding domain LIS44_06415 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_06415 IPR012081 Alkyl hydroperoxide reductase subunit F LIS44_06435 IPR013766 Thioredoxin domain LIS44_06435 IPR019479 Peroxiredoxin, C-terminal LIS44_06435 IPR017559 Alkyl hydroperoxide reductase subunit C LIS44_06435 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIS44_06435 IPR036249 Thioredoxin-like superfamily LIS44_06435 IPR024706 Peroxiredoxin, AhpC-type LIS44_06445 IPR016039 Thiolase-like LIS44_06445 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 LIS44_06445 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal LIS44_06445 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LIS44_06460 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06460 IPR029491 Helicase Helix-turn-helix domain LIS44_06460 IPR010285 DNA helicase Pif1-like LIS44_06460 IPR003593 AAA+ ATPase domain LIS44_06465 IPR005821 Ion transport domain LIS44_06465 IPR014710 RmlC-like jelly roll fold LIS44_06465 IPR028325 Voltage-gated potassium channel LIS44_06465 IPR018488 Cyclic nucleotide-binding, conserved site LIS44_06465 IPR018490 Cyclic nucleotide-binding-like LIS44_06465 IPR000595 Cyclic nucleotide-binding domain LIS44_06475 IPR006276 Cobalamin-independent methionine synthase LIS44_06475 IPR038071 UROD/MetE-like superfamily LIS44_06475 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal LIS44_06475 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal LIS44_06490 IPR036259 MFS transporter superfamily LIS44_06490 IPR020846 Major facilitator superfamily domain LIS44_06490 IPR011701 Major facilitator superfamily LIS44_06490 IPR004747 Cyanate transport system protein LIS44_06495 IPR007382 Uncharacterised protein family UPF0756, transmembrame LIS44_06500 IPR036986 RNA-binding S4 domain superfamily LIS44_06500 IPR006145 Pseudouridine synthase, RsuA/RluA LIS44_06500 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LIS44_06500 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIS44_06500 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LIS44_06500 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LIS44_06500 IPR002942 RNA-binding S4 domain LIS44_06520 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06520 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE LIS44_06525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_06525 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_06525 IPR037198 MutL, C-terminal domain superfamily LIS44_06525 IPR042120 MutL, C-terminal domain, dimerisation subdomain LIS44_06525 IPR014790 MutL, C-terminal, dimerisation LIS44_06525 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms LIS44_06525 IPR013507 DNA mismatch repair protein, S5 domain 2-like LIS44_06525 IPR002099 DNA mismatch repair protein family, N-terminal LIS44_06525 IPR020667 DNA mismatch repair protein, MutL LIS44_06525 IPR014762 DNA mismatch repair, conserved site LIS44_06525 IPR042121 MutL, C-terminal domain, regulatory subdomain LIS44_06525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_06530 IPR039657 Dimethylallyltransferase LIS44_06530 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06530 IPR018022 IPP transferase LIS44_06535 IPR010920 LSM domain superfamily LIS44_06535 IPR005001 RNA-binding protein Hfq LIS44_06540 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LIS44_06540 IPR023034 Peptidyl-prolyl isomerase SurA LIS44_06540 IPR027304 Trigger factor/SurA domain superfamily LIS44_06540 IPR015391 SurA N-terminal LIS44_06545 IPR007543 LptD, C-terminal LIS44_06545 IPR020889 LPS-assembly protein LptD LIS44_06545 IPR005653 Organic solvent tolerance-like, N-terminal LIS44_06550 IPR002575 Aminoglycoside phosphotransferase LIS44_06550 IPR011009 Protein kinase-like domain superfamily LIS44_06555 IPR005835 Nucleotidyl transferase domain LIS44_06555 IPR029044 Nucleotide-diphospho-sugar transferases LIS44_06560 IPR003682 rRNA small subunit methyltransferase G LIS44_06560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_06565 IPR025669 AAA domain LIS44_06565 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06570 IPR036086 ParB/Sulfiredoxin superfamily LIS44_06570 IPR004437 ParB/RepB/Spo0J partition protein LIS44_06570 IPR041468 ParB/Spo0J, HTH domain LIS44_06570 IPR003115 ParB/Sulfiredoxin LIS44_06575 IPR002898 MotA/TolQ/ExbB proton channel LIS44_06585 IPR003593 AAA+ ATPase domain LIS44_06585 IPR011527 ABC transporter type 1, transmembrane domain LIS44_06585 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIS44_06585 IPR003439 ABC transporter-like LIS44_06585 IPR017871 ABC transporter, conserved site LIS44_06585 IPR011917 ABC transporter, lipid A export, MsbA LIS44_06585 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06585 IPR039421 Type I protein exporter LIS44_06590 IPR003758 Tetraacyldisaccharide 4'-kinase LIS44_06590 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06595 IPR029044 Nucleotide-diphospho-sugar transferases LIS44_06595 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase LIS44_06595 IPR003329 Acylneuraminate cytidylyltransferase LIS44_06610 IPR001130 TatD family LIS44_06610 IPR015991 Uncharacterised hydrolase TatD-type LIS44_06610 IPR018228 Deoxyribonuclease, TatD-related, conserved site LIS44_06610 IPR032466 Metal-dependent hydrolase LIS44_06620 IPR002416 Type II secretion system protein H LIS44_06620 IPR022346 General secretion pathway, GspH LIS44_06620 IPR012902 Prokaryotic N-terminal methylation site LIS44_06625 IPR010052 Type II secretion system protein I LIS44_06625 IPR003413 Type II secretion system protein I domain LIS44_06625 IPR012902 Prokaryotic N-terminal methylation site LIS44_06630 IPR010055 Type II secretion system protein J LIS44_06630 IPR012902 Prokaryotic N-terminal methylation site LIS44_06635 IPR005628 General secretion pathway protein K LIS44_06635 IPR038072 GspK, central domain superfamily LIS44_06645 IPR018085 Uracil-DNA glycosylase, active site LIS44_06645 IPR002043 Uracil-DNA glycosylase family 1 LIS44_06645 IPR005122 Uracil-DNA glycosylase-like LIS44_06645 IPR036895 Uracil-DNA glycosylase-like domain superfamily LIS44_06655 IPR028883 tRNA-specific adenosine deaminase LIS44_06655 IPR016193 Cytidine deaminase-like LIS44_06655 IPR002125 Cytidine and deoxycytidylate deaminase domain LIS44_06655 IPR016192 APOBEC/CMP deaminase, zinc-binding LIS44_06665 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06665 IPR011994 Cytidylate kinase domain LIS44_06665 IPR003136 Cytidylate kinase LIS44_06670 IPR022967 RNA-binding domain, S1 LIS44_06670 IPR003029 S1 domain LIS44_06670 IPR000110 Ribosomal protein S1 LIS44_06670 IPR012340 Nucleic acid-binding, OB-fold LIS44_06675 IPR020816 Histone-like DNA-binding protein, conserved site LIS44_06675 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LIS44_06675 IPR005685 Integration host factor, beta subunit LIS44_06675 IPR000119 Histone-like DNA-binding protein LIS44_06685 IPR013785 Aldolase-type TIM barrel LIS44_06685 IPR014732 Orotidine 5'-phosphate decarboxylase LIS44_06685 IPR018089 Orotidine 5'-phosphate decarboxylase, active site LIS44_06685 IPR001754 Orotidine 5'-phosphate decarboxylase domain LIS44_06685 IPR011060 Ribulose-phosphate binding barrel LIS44_06690 IPR005642 Lysine exporter LysO LIS44_06700 IPR038717 Tc1-like transposase, DDE domain LIS44_06720 IPR005654 ATPase, AFG1-like LIS44_06720 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06720 IPR030870 Cell division protein ZapE LIS44_06730 IPR001207 Transposase, mutator type LIS44_06775 IPR029056 Ribokinase-like LIS44_06775 IPR000417 Hydroxyethylthiazole kinase LIS44_06790 IPR042097 Aminopeptidase N-like , N-terminal LIS44_06790 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily LIS44_06790 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase LIS44_06790 IPR014782 Peptidase M1, membrane alanine aminopeptidase LIS44_06790 IPR012779 Peptidase M1, alanyl aminopeptidase LIS44_06790 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal LIS44_06790 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold LIS44_06790 IPR027268 Peptidase M4/M1, CTD superfamily LIS44_06790 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily LIS44_06800 IPR006016 UspA LIS44_06805 IPR006015 Universal stress protein A family LIS44_06805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_06805 IPR006016 UspA LIS44_06810 IPR019819 Carboxylesterase type B, conserved site LIS44_06810 IPR019826 Carboxylesterase type B, active site LIS44_06810 IPR002018 Carboxylesterase, type B LIS44_06810 IPR029058 Alpha/Beta hydrolase fold LIS44_06815 IPR004711 Benzoate transporter LIS44_06820 IPR001123 Amino acid exporter protein, LeuE-type LIS44_06820 IPR004778 Homoserine/Threonine efflux protein LIS44_06830 IPR000847 Transcription regulator HTH, LysR LIS44_06830 IPR005119 LysR, substrate-binding LIS44_06830 IPR036390 Winged helix DNA-binding domain superfamily LIS44_06830 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_06840 IPR012806 Acetyl-CoA C-acyltransferase FadI LIS44_06840 IPR002155 Thiolase LIS44_06840 IPR020616 Thiolase, N-terminal LIS44_06840 IPR020613 Thiolase, conserved site LIS44_06840 IPR020617 Thiolase, C-terminal LIS44_06840 IPR020610 Thiolase, active site LIS44_06840 IPR016039 Thiolase-like LIS44_06845 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_06845 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_06845 IPR036291 NAD(P)-binding domain superfamily LIS44_06845 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LIS44_06860 IPR012338 Beta-lactamase/transpeptidase-like LIS44_06860 IPR001466 Beta-lactamase-related LIS44_06870 IPR001207 Transposase, mutator type LIS44_06890 IPR001270 ClpA/B family LIS44_06890 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal LIS44_06890 IPR022754 DNA polymerase III, gamma subunit, domain III LIS44_06890 IPR012763 DNA polymerase III, subunit gamma/ tau LIS44_06890 IPR021029 DNA polymerase III, tau subunit, domain V LIS44_06890 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_06890 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily LIS44_06890 IPR003593 AAA+ ATPase domain LIS44_06890 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV LIS44_06895 IPR029069 HotDog domain superfamily LIS44_06895 IPR006683 Thioesterase domain LIS44_06905 IPR023485 Phosphotyrosine protein phosphatase I LIS44_06905 IPR036196 Phosphotyrosine protein phosphatase I superfamily LIS44_06905 IPR017867 Protein-tyrosine phosphatase, low molecular weight LIS44_06910 IPR036318 FAD-binding, type PCMH-like superfamily LIS44_06910 IPR016167 FAD-binding, type PCMH, subdomain 1 LIS44_06910 IPR016169 FAD-binding, type PCMH, subdomain 2 LIS44_06910 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase LIS44_06910 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal LIS44_06910 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily LIS44_06910 IPR016166 FAD-binding domain, PCMH-type LIS44_06910 IPR006094 FAD linked oxidase, N-terminal LIS44_06925 IPR013785 Aldolase-type TIM barrel LIS44_06925 IPR027283 Glutamate synthase large subunit-like protein, bacteria LIS44_06925 IPR002932 Glutamate synthase domain LIS44_06925 IPR024188 Glutamate synthase large subunit-like protein LIS44_06935 IPR016450 Uncharacterised conserved protein UCP005522 LIS44_06935 IPR025841 Circularly permuted ATP-grasp type 2 LIS44_06945 IPR013589 Bacterial transglutaminase-like, N-terminal LIS44_06945 IPR038765 Papain-like cysteine peptidase superfamily LIS44_06945 IPR002931 Transglutaminase-like LIS44_06955 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LIS44_06955 IPR011079 Alanine racemase, C-terminal LIS44_06955 IPR001608 Alanine racemase, N-terminal LIS44_06955 IPR029066 PLP-binding barrel LIS44_06955 IPR000821 Alanine racemase LIS44_06965 IPR036935 Ribosomal protein L9, N-terminal domain superfamily LIS44_06965 IPR036791 Ribosomal protein L9, C-terminal domain superfamily LIS44_06965 IPR020069 Ribosomal protein L9, C-terminal LIS44_06965 IPR020594 Ribosomal protein L9, bacteria/chloroplast LIS44_06965 IPR009027 Ribosomal protein L9/RNase H1, N-terminal LIS44_06965 IPR020070 Ribosomal protein L9, N-terminal LIS44_06965 IPR000244 Ribosomal protein L9 LIS44_06970 IPR001648 Ribosomal protein S18 LIS44_06970 IPR018275 Ribosomal protein S18, conserved site LIS44_06970 IPR036870 Ribosomal protein S18 superfamily LIS44_06975 IPR020815 Ribosomal protein S6, conserved site LIS44_06975 IPR000529 Ribosomal protein S6 LIS44_06975 IPR020814 Ribosomal protein S6, plastid/chloroplast LIS44_06975 IPR035980 Ribosomal protein S6 superfamily LIS44_06975 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LIS44_06980 IPR030470 UbiA prenyltransferase conserved site LIS44_06980 IPR000537 UbiA prenyltransferase family LIS44_06980 IPR006369 Protohaem IX farnesyltransferase LIS44_06985 IPR014210 Cytochrome o ubiquinol oxidase subunit IV LIS44_06985 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes LIS44_06990 IPR000298 Cytochrome c oxidase subunit III-like LIS44_06990 IPR024791 Cytochrome c oxidase subunit III LIS44_06990 IPR014206 Cytochrome o ubiquinol oxidase, subunit III LIS44_06990 IPR035973 Cytochrome c oxidase subunit III-like superfamily LIS44_06990 IPR033946 Ubiquinol oxidase subunit III domain LIS44_06990 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle LIS44_06995 IPR000883 Cytochrome c oxidase subunit I LIS44_06995 IPR036927 Cytochrome c oxidase-like, subunit I superfamily LIS44_06995 IPR023616 Cytochrome c oxidase-like, subunit I domain LIS44_06995 IPR014207 Cytochrome o ubiquinol oxidase, subunit I LIS44_06995 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site LIS44_07010 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding LIS44_07010 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIS44_07010 IPR036637 Phosphohistidine domain superfamily LIS44_07010 IPR023151 PEP-utilising enzyme, conserved site LIS44_07010 IPR000121 PEP-utilising enzyme, C-terminal LIS44_07010 IPR018274 PEP-utilising enzyme, active site LIS44_07010 IPR040442 Pyruvate kinase-like domain superfamily LIS44_07010 IPR006319 Phosphoenolpyruvate synthase LIS44_07010 IPR013815 ATP-grasp fold, subdomain 1 LIS44_07010 IPR008279 PEP-utilising enzyme, mobile domain LIS44_07015 IPR026530 Phosphoenolpyruvate synthase regulatory protein LIS44_07015 IPR005177 Bifunctional kinase-pyrophosphorylase LIS44_07030 IPR011251 Luciferase-like domain LIS44_07030 IPR036661 Luciferase-like domain superfamily LIS44_07030 IPR019949 Luciferase family oxidoreductase, group 1 LIS44_07045 IPR005139 Peptide chain release factor LIS44_07045 IPR000352 Peptide chain release factor class I LIS44_07045 IPR004373 Peptide chain release factor 1 LIS44_07050 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific LIS44_07050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_07050 IPR040758 Release factor glutamine methyltransferase, N-terminal domain LIS44_07050 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LIS44_07050 IPR004556 Methyltransferase HemK-like LIS44_07050 IPR025714 Methyltransferase domain LIS44_07055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_07055 IPR035906 MetI-like superfamily LIS44_07060 IPR015168 SsuA/THI5-like LIS44_07060 IPR010067 Aliphatic sulfonates-binding protein LIS44_07060 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LIS44_07075 IPR036291 NAD(P)-binding domain superfamily LIS44_07075 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_07075 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_07080 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_07080 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_07080 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_07080 IPR006089 Acyl-CoA dehydrogenase, conserved site LIS44_07080 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_07080 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_07080 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_07085 IPR025110 AMP-binding enzyme, C-terminal domain LIS44_07085 IPR042099 AMP-dependent synthetase-like superfamily LIS44_07085 IPR020845 AMP-binding, conserved site LIS44_07085 IPR000873 AMP-dependent synthetase/ligase LIS44_07090 IPR035985 Ubiquitin-activating enzyme LIS44_07090 IPR000594 THIF-type NAD/FAD binding fold LIS44_07090 IPR012730 Molybdopterin synthase sulfurylase MoeB LIS44_07095 IPR000719 Protein kinase domain LIS44_07095 IPR011009 Protein kinase-like domain superfamily LIS44_07095 IPR004147 UbiB domain LIS44_07100 IPR006156 Dihydroneopterin aldolase LIS44_07100 IPR006157 Dihydroneopterin aldolase/epimerase domain LIS44_07110 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily LIS44_07110 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 LIS44_07110 IPR023828 Peptidase S8, subtilisin, Ser-active site LIS44_07110 IPR022398 Peptidase S8, subtilisin, His-active site LIS44_07110 IPR015500 Peptidase S8, subtilisin-related LIS44_07110 IPR036852 Peptidase S8/S53 domain superfamily LIS44_07110 IPR000209 Peptidase S8/S53 domain LIS44_07110 IPR034193 Proteinase K-like catalytic domain LIS44_07110 IPR023827 Peptidase S8, subtilisin, Asp-active site LIS44_07115 IPR009664 Pyrimidine/purine nucleoside phosphorylase LIS44_07115 IPR014710 RmlC-like jelly roll fold LIS44_07115 IPR011051 RmlC-like cupin domain superfamily LIS44_07120 IPR011566 Ubiquinone biosynthesis protein Coq7 LIS44_07120 IPR009078 Ferritin-like superfamily LIS44_07125 IPR036259 MFS transporter superfamily LIS44_07125 IPR011701 Major facilitator superfamily LIS44_07125 IPR023727 Lysophospholipid transporter LplT LIS44_07130 IPR000184 Bacterial surface antigen (D15) LIS44_07130 IPR010827 POTRA domain, BamA/TamA-like LIS44_07130 IPR039910 Surface antigen D15-like LIS44_07130 IPR034746 POTRA domain LIS44_07130 IPR035243 TamA, POTRA domain 1 LIS44_07145 IPR012340 Nucleic acid-binding, OB-fold LIS44_07145 IPR002059 Cold-shock protein, DNA-binding LIS44_07145 IPR019844 Cold-shock (CSD) domain LIS44_07145 IPR011129 Cold shock domain LIS44_07145 IPR012156 Cold shock, CspA LIS44_07160 IPR015929 Aconitase B, swivel LIS44_07160 IPR036288 Aconitase B, HEAT-like domain superfamily LIS44_07160 IPR015933 Aconitase B, HEAT-like domain LIS44_07160 IPR004406 Aconitase B LIS44_07160 IPR036008 Aconitase, iron-sulfur domain LIS44_07160 IPR018136 Aconitase family, 4Fe-4S cluster binding site LIS44_07160 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LIS44_07160 IPR015932 Aconitase, domain 2 LIS44_07160 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 LIS44_07160 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain LIS44_07165 IPR029016 GAF-like domain superfamily LIS44_07165 IPR000160 GGDEF domain LIS44_07165 IPR029787 Nucleotide cyclase LIS44_07190 IPR000994 Peptidase M24 LIS44_07190 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 LIS44_07190 IPR001714 Peptidase M24, methionine aminopeptidase LIS44_07190 IPR036005 Creatinase/aminopeptidase-like LIS44_07195 IPR005119 LysR, substrate-binding LIS44_07195 IPR000847 Transcription regulator HTH, LysR LIS44_07195 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_07195 IPR036390 Winged helix DNA-binding domain superfamily LIS44_07200 IPR003000 Sirtuin family LIS44_07200 IPR026590 Sirtuin family, catalytic core domain LIS44_07200 IPR026591 Sirtuin, catalytic core small domain superfamily LIS44_07200 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIS44_07200 IPR027546 Sirtuin, class III LIS44_07205 IPR029058 Alpha/Beta hydrolase fold LIS44_07205 IPR000073 Alpha/beta hydrolase fold-1 LIS44_07215 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LIS44_07215 IPR023753 FAD/NAD(P)-binding domain LIS44_07215 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_07215 IPR013785 Aldolase-type TIM barrel LIS44_07270 IPR026032 Probable 3-phenylpropionic acid transporter LIS44_07270 IPR036259 MFS transporter superfamily LIS44_07270 IPR024989 Major facilitator superfamily associated domain LIS44_07280 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase LIS44_07280 IPR011761 ATP-grasp fold LIS44_07280 IPR013815 ATP-grasp fold, subdomain 1 LIS44_07280 IPR005481 Biotin carboxylase-like, N-terminal domain LIS44_07280 IPR005482 Biotin carboxylase, C-terminal LIS44_07280 IPR011764 Biotin carboxylation domain LIS44_07280 IPR016185 Pre-ATP-grasp domain superfamily LIS44_07280 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain LIS44_07280 IPR011054 Rudiment single hybrid motif LIS44_07285 IPR001249 Acetyl-CoA biotin carboxyl carrier LIS44_07285 IPR001882 Biotin-binding site LIS44_07285 IPR000089 Biotin/lipoyl attachment LIS44_07285 IPR011053 Single hybrid motif LIS44_07290 IPR001874 Dehydroquinase, class II LIS44_07290 IPR018509 Dehydroquinase, class II, conserved site LIS44_07290 IPR036441 Dehydroquinase, class II superfamily LIS44_07305 IPR039418 LexA-like LIS44_07305 IPR036286 LexA/Signal peptidase-like superfamily LIS44_07305 IPR006197 Peptidase S24, LexA-like LIS44_07305 IPR015927 Peptidase S24/S26A/S26B/S26C LIS44_07325 IPR029058 Alpha/Beta hydrolase fold LIS44_07325 IPR000073 Alpha/beta hydrolase fold-1 LIS44_07380 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath LIS44_07395 IPR010272 Type VI secretion system, TssF-like LIS44_07410 IPR027806 Harbinger transposase-derived nuclease domain LIS44_07410 IPR027805 Transposase, Helix-turn-helix domain LIS44_07415 IPR010623 Type VI secretion system IcmF, C-terminal LIS44_07415 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_07415 IPR017731 Type VI secretion system, IcmF LIS44_07415 IPR025743 IcmF-related, N-terminal domain LIS44_07415 IPR009612 IcmF-related LIS44_07420 IPR039567 Glycine zipper domain LIS44_07420 IPR006664 Outer membrane protein, bacterial LIS44_07420 IPR006665 OmpA-like domain LIS44_07420 IPR006690 Outer membrane protein, OmpA-like, conserved site LIS44_07420 IPR036737 OmpA-like domain superfamily LIS44_07425 IPR000120 Amidase LIS44_07425 IPR020556 Amidase, conserved site LIS44_07425 IPR023631 Amidase signature domain LIS44_07425 IPR036928 Amidase signature (AS) superfamily LIS44_07430 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_07430 IPR004839 Aminotransferase, class I/classII LIS44_07430 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_07430 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_07430 IPR000524 Transcription regulator HTH, GntR LIS44_07430 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_07430 IPR036390 Winged helix DNA-binding domain superfamily LIS44_07445 IPR017871 ABC transporter, conserved site LIS44_07445 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_07445 IPR015854 ABC transporter, lipoprotein release, LolD LIS44_07445 IPR003439 ABC transporter-like LIS44_07445 IPR003593 AAA+ ATPase domain LIS44_07450 IPR025857 MacB-like periplasmic core domain LIS44_07450 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E LIS44_07450 IPR003838 ABC transporter permease protein domain LIS44_07465 IPR020846 Major facilitator superfamily domain LIS44_07465 IPR005829 Sugar transporter, conserved site LIS44_07465 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family LIS44_07465 IPR011701 Major facilitator superfamily LIS44_07465 IPR036259 MFS transporter superfamily LIS44_07470 IPR036390 Winged helix DNA-binding domain superfamily LIS44_07470 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_07470 IPR000847 Transcription regulator HTH, LysR LIS44_07470 IPR005119 LysR, substrate-binding LIS44_07480 IPR026029 Muconolactone isomerase domain LIS44_07480 IPR011008 Dimeric alpha-beta barrel LIS44_07480 IPR003464 Muconolactone delta-isomerase LIS44_07495 IPR000391 Ring-hydroxylating dioxygenase beta subunit LIS44_07495 IPR032710 NTF2-like domain superfamily LIS44_07495 IPR017641 Benzoate 1,2-dioxygenase, small subunit LIS44_07500 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site LIS44_07500 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LIS44_07500 IPR017938 Riboflavin synthase-like beta-barrel LIS44_07500 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase LIS44_07500 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain LIS44_07500 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain LIS44_07500 IPR001433 Oxidoreductase FAD/NAD(P)-binding LIS44_07500 IPR017927 FAD-binding domain, ferredoxin reductase-type LIS44_07500 IPR012675 Beta-grasp domain superfamily LIS44_07500 IPR036010 2Fe-2S ferredoxin-like superfamily LIS44_07505 IPR036291 NAD(P)-binding domain superfamily LIS44_07505 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_07505 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_07515 IPR012792 3-oxoacid CoA-transferase, subunit A LIS44_07515 IPR004165 Coenzyme A transferase family I LIS44_07515 IPR004163 Coenzyme A transferase binding site LIS44_07515 IPR037171 NagB/RpiA transferase-like LIS44_07520 IPR004164 Coenzyme A transferase active site LIS44_07520 IPR012791 3-oxoacid CoA-transferase, subunit B LIS44_07520 IPR004165 Coenzyme A transferase family I LIS44_07520 IPR037171 NagB/RpiA transferase-like LIS44_07525 IPR020613 Thiolase, conserved site LIS44_07525 IPR020617 Thiolase, C-terminal LIS44_07525 IPR020610 Thiolase, active site LIS44_07525 IPR016039 Thiolase-like LIS44_07525 IPR020615 Thiolase, acyl-enzyme intermediate active site LIS44_07525 IPR012793 Beta-ketoadipyl CoA thiolase LIS44_07525 IPR020616 Thiolase, N-terminal LIS44_07525 IPR002155 Thiolase LIS44_07530 IPR026968 3-oxoadipate enol-lactonase 1/2 LIS44_07530 IPR022742 Serine aminopeptidase, S33 LIS44_07530 IPR000073 Alpha/beta hydrolase fold-1 LIS44_07530 IPR029058 Alpha/Beta hydrolase fold LIS44_07540 IPR003776 YcaO-like domain LIS44_07540 IPR041080 YcaO cyclodehydratase, C-terminal LIS44_07565 IPR011701 Major facilitator superfamily LIS44_07565 IPR036259 MFS transporter superfamily LIS44_07565 IPR020846 Major facilitator superfamily domain LIS44_07585 IPR017821 Succinate CoA transferase LIS44_07585 IPR037171 NagB/RpiA transferase-like LIS44_07585 IPR003702 Acetyl-CoA hydrolase/transferase LIS44_07585 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily LIS44_07585 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain LIS44_07590 IPR020616 Thiolase, N-terminal LIS44_07590 IPR020613 Thiolase, conserved site LIS44_07590 IPR020617 Thiolase, C-terminal LIS44_07590 IPR020610 Thiolase, active site LIS44_07590 IPR020615 Thiolase, acyl-enzyme intermediate active site LIS44_07590 IPR016039 Thiolase-like LIS44_07590 IPR002155 Thiolase LIS44_07595 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_07595 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_07595 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_07595 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_07595 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_07595 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain LIS44_07595 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_07600 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIS44_07600 IPR009057 Homeobox-like domain superfamily LIS44_07600 IPR001647 DNA-binding HTH domain, TetR-type LIS44_07600 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIS44_07600 IPR013571 Transcription regulator QacR, C-terminal LIS44_07605 IPR036390 Winged helix DNA-binding domain superfamily LIS44_07605 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_07605 IPR005119 LysR, substrate-binding LIS44_07605 IPR000847 Transcription regulator HTH, LysR LIS44_07610 IPR005856 Cysteine synthase LIS44_07610 IPR005859 Cysteine synthase CysK LIS44_07610 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site LIS44_07610 IPR001926 Pyridoxal-phosphate dependent enzyme LIS44_07610 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIS44_07620 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_07620 IPR011991 ArsR-like helix-turn-helix domain LIS44_07620 IPR001845 HTH ArsR-type DNA-binding domain LIS44_07620 IPR036390 Winged helix DNA-binding domain superfamily LIS44_07625 IPR001902 SLC26A/SulP transporter LIS44_07625 IPR036513 STAS domain superfamily LIS44_07625 IPR002645 STAS domain LIS44_07625 IPR011547 SLC26A/SulP transporter domain LIS44_07630 IPR001991 Sodium:dicarboxylate symporter LIS44_07630 IPR023025 Serine/threonine transporter SstT LIS44_07630 IPR036458 Sodium:dicarboxylate symporter superfamily LIS44_07640 IPR018636 Protein of unknown function DUF2058 LIS44_07650 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily LIS44_07650 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily LIS44_07650 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain LIS44_07650 IPR002081 Cryptochrome/DNA photolyase class 1 LIS44_07650 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal LIS44_07650 IPR006050 DNA photolyase, N-terminal LIS44_07650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_07660 IPR003593 AAA+ ATPase domain LIS44_07660 IPR011527 ABC transporter type 1, transmembrane domain LIS44_07660 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIS44_07660 IPR003439 ABC transporter-like LIS44_07660 IPR017871 ABC transporter, conserved site LIS44_07660 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_07660 IPR039421 Type I protein exporter LIS44_07670 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal LIS44_07670 IPR020449 Transcription regulator HTH, AraC- type LIS44_07670 IPR009057 Homeobox-like domain superfamily LIS44_07670 IPR018060 DNA binding HTH domain, AraC-type LIS44_07675 IPR033753 Glycine cleavage system H-protein/Simiate LIS44_07675 IPR017453 Glycine cleavage system H-protein, subgroup LIS44_07675 IPR011053 Single hybrid motif LIS44_07675 IPR000089 Biotin/lipoyl attachment LIS44_07675 IPR002930 Glycine cleavage system H-protein LIS44_07675 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LIS44_07685 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_07685 IPR006321 Pilus retraction protein PilT LIS44_07685 IPR001482 Type II/IV secretion system protein LIS44_07690 IPR013785 Aldolase-type TIM barrel LIS44_07690 IPR006218 DAHP synthetase I/KDSA LIS44_07690 IPR006219 DHAP synthase, class 1 LIS44_07695 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_07695 IPR004839 Aminotransferase, class I/classII LIS44_07695 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_07695 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site LIS44_07695 IPR000796 Aspartate/other aminotransferase LIS44_07695 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_07700 IPR020843 Polyketide synthase, enoylreductase domain LIS44_07700 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LIS44_07700 IPR011032 GroES-like superfamily LIS44_07700 IPR014183 Alcohol dehydrogenase class III LIS44_07700 IPR013149 Alcohol dehydrogenase, C-terminal LIS44_07700 IPR013154 Alcohol dehydrogenase, N-terminal LIS44_07700 IPR036291 NAD(P)-binding domain superfamily LIS44_07725 IPR036291 NAD(P)-binding domain superfamily LIS44_07725 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_07725 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_07740 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_07740 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_07740 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_07740 IPR006089 Acyl-CoA dehydrogenase, conserved site LIS44_07740 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_07740 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_07740 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_07750 IPR035437 SNase-like, OB-fold superfamily LIS44_07750 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold LIS44_07750 IPR002071 Thermonuclease active site LIS44_07765 IPR005829 Sugar transporter, conserved site LIS44_07765 IPR036259 MFS transporter superfamily LIS44_07765 IPR020846 Major facilitator superfamily domain LIS44_07765 IPR011701 Major facilitator superfamily LIS44_07765 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG LIS44_07780 IPR005677 Fumarate hydratase, class II LIS44_07780 IPR024083 Fumarase/histidase, N-terminal LIS44_07780 IPR018951 Fumarase C, C-terminal LIS44_07780 IPR000362 Fumarate lyase family LIS44_07780 IPR022761 Fumarate lyase, N-terminal LIS44_07780 IPR008948 L-Aspartase-like LIS44_07780 IPR020557 Fumarate lyase, conserved site LIS44_07785 IPR016040 NAD(P)-binding domain LIS44_07785 IPR036291 NAD(P)-binding domain superfamily LIS44_07785 IPR005886 UDP-glucose 4-epimerase LIS44_07790 IPR036291 NAD(P)-binding domain superfamily LIS44_07790 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_07790 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_07800 IPR027396 DsrEFH-like LIS44_07800 IPR003787 Sulphur relay, DsrE/F-like protein LIS44_07800 IPR017463 Sulphur relay, TusD/DsrE LIS44_07820 IPR005119 LysR, substrate-binding LIS44_07820 IPR000847 Transcription regulator HTH, LysR LIS44_07820 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_07820 IPR036390 Winged helix DNA-binding domain superfamily LIS44_07825 IPR023760 Holin-like protein CidA LIS44_07825 IPR005538 LrgA/CidA family LIS44_07835 IPR003805 Adenosylcobinamide-GDP ribazoletransferase LIS44_07845 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily LIS44_07845 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic LIS44_07845 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like LIS44_07845 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal LIS44_07850 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase LIS44_07850 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_07895 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LIS44_07895 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily LIS44_07895 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain LIS44_07910 IPR033885 Alkane/xylene monooxygenase LIS44_07910 IPR005804 Fatty acid desaturase domain LIS44_07915 IPR011051 RmlC-like cupin domain superfamily LIS44_07915 IPR020449 Transcription regulator HTH, AraC- type LIS44_07915 IPR018062 HTH domain AraC-type, conserved site LIS44_07915 IPR014710 RmlC-like jelly roll fold LIS44_07915 IPR009057 Homeobox-like domain superfamily LIS44_07915 IPR032783 AraC-type transcription regulator, ligand-binding domain LIS44_07915 IPR018060 DNA binding HTH domain, AraC-type LIS44_07920 IPR003835 Glycosyl transferase, family 19 LIS44_07930 IPR006219 DHAP synthase, class 1 LIS44_07930 IPR006218 DAHP synthetase I/KDSA LIS44_07930 IPR013785 Aldolase-type TIM barrel LIS44_07955 IPR023080 D-amino acid dehydrogenase DadA LIS44_07955 IPR006076 FAD dependent oxidoreductase LIS44_07955 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_07965 IPR000453 Chorismate synthase LIS44_07965 IPR035904 Chorismate synthase AroC superfamily LIS44_07965 IPR020541 Chorismate synthase, conserved site LIS44_07970 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LIS44_07970 IPR004556 Methyltransferase HemK-like LIS44_07970 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase LIS44_07970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_07970 IPR007848 Methyltransferase small domain LIS44_07990 IPR011009 Protein kinase-like domain superfamily LIS44_07990 IPR004147 UbiB domain LIS44_07995 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_07995 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_07995 IPR006089 Acyl-CoA dehydrogenase, conserved site LIS44_07995 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_07995 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_07995 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_07995 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_08000 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_08000 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_08000 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_08000 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_08000 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_08000 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_08000 IPR006089 Acyl-CoA dehydrogenase, conserved site LIS44_08005 IPR000182 GNAT domain LIS44_08005 IPR016181 Acyl-CoA N-acyltransferase LIS44_08010 IPR002818 DJ-1/PfpI LIS44_08010 IPR029062 Class I glutamine amidotransferase-like LIS44_08010 IPR006286 Deglycase PfpI LIS44_08020 IPR016047 Peptidase M23 LIS44_08020 IPR010090 Phage tail tape measure protein LIS44_08020 IPR000189 Prokaryotic transglycosylase, active site LIS44_08020 IPR008258 Transglycosylase SLT domain 1 LIS44_08020 IPR023346 Lysozyme-like domain superfamily LIS44_08020 IPR011055 Duplicated hybrid motif LIS44_08065 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily LIS44_08065 IPR003593 AAA+ ATPase domain LIS44_08065 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_08065 IPR013822 Signal recognition particle SRP54, helical bundle LIS44_08065 IPR004390 Signal-recognition particle receptor FtsY LIS44_08065 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain LIS44_08065 IPR036225 SRP/SRP receptor, N-terminal LIS44_08105 IPR001926 Pyridoxal-phosphate dependent enzyme LIS44_08105 IPR006653 Tryptophan synthase, beta chain, conserved site LIS44_08105 IPR006654 Tryptophan synthase, beta chain LIS44_08105 IPR023026 Tryptophan synthase beta chain/beta chain-like LIS44_08105 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIS44_08115 IPR000642 Peptidase M41 LIS44_08115 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_08115 IPR005936 Peptidase, FtsH LIS44_08115 IPR037219 Peptidase M41-like LIS44_08115 IPR003959 ATPase, AAA-type, core LIS44_08115 IPR041569 AAA ATPase, AAA+ lid domain LIS44_08115 IPR003593 AAA+ ATPase domain LIS44_08125 IPR038068 YcgL-like superfamily LIS44_08125 IPR027354 YcgL domain LIS44_08130 IPR010997 HRDC-like superfamily LIS44_08130 IPR036397 Ribonuclease H superfamily LIS44_08130 IPR012337 Ribonuclease H-like superfamily LIS44_08130 IPR006292 Ribonuclease D LIS44_08130 IPR002121 HRDC domain LIS44_08130 IPR002562 3'-5' exonuclease domain LIS44_08135 IPR006171 TOPRIM domain LIS44_08135 IPR000093 DNA recombination protein RecR LIS44_08135 IPR015967 Recombination protein RecR, conserved site LIS44_08135 IPR034137 RecR, TOPRIM domain LIS44_08135 IPR023628 Recombination protein RecR, C4-type zinc finger LIS44_08135 IPR023627 Recombination protein RecR LIS44_08145 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme LIS44_08145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_08145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_08145 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_08145 IPR006234 O-succinylhomoserine sulfhydrylase LIS44_08155 IPR013328 6-phosphogluconate dehydrogenase, domain 2 LIS44_08155 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain LIS44_08155 IPR036291 NAD(P)-binding domain superfamily LIS44_08155 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_08155 IPR015815 3-hydroxyisobutyrate dehydrogenase-related LIS44_08155 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding LIS44_08155 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site LIS44_08165 IPR011146 HIT-like domain LIS44_08165 IPR039384 HINT family LIS44_08165 IPR019808 Histidine triad, conserved site LIS44_08165 IPR036265 HIT-like superfamily LIS44_08165 IPR001310 Histidine triad (HIT) protein LIS44_08180 IPR002585 Cytochrome ubiquinol oxidase subunit 1 LIS44_08190 IPR011724 Cyd operon protein YbgT LIS44_08190 IPR012994 Membrane bound YbgT-like LIS44_08205 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LIS44_08205 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB LIS44_08205 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LIS44_08210 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site LIS44_08210 IPR034683 Cytidylyltransferase IspD/TarI LIS44_08210 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LIS44_08210 IPR029044 Nucleotide-diphospho-sugar transferases LIS44_08215 IPR023081 Cell division protein FtsB LIS44_08215 IPR007060 Septum formation initiator FtsL/DivIC LIS44_08220 IPR036849 Enolase-like, C-terminal domain superfamily LIS44_08220 IPR029017 Enolase-like, N-terminal LIS44_08220 IPR020809 Enolase, conserved site LIS44_08220 IPR020810 Enolase, C-terminal TIM barrel domain LIS44_08220 IPR000941 Enolase LIS44_08220 IPR020811 Enolase, N-terminal LIS44_08225 IPR006218 DAHP synthetase I/KDSA LIS44_08225 IPR006269 3-deoxy-8-phosphooctulonate synthase LIS44_08225 IPR013785 Aldolase-type TIM barrel LIS44_08230 IPR004468 CTP synthase LIS44_08230 IPR017456 CTP synthase, N-terminal LIS44_08230 IPR017926 Glutamine amidotransferase LIS44_08230 IPR033828 CTP synthase GATase domain LIS44_08230 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_08230 IPR029062 Class I glutamine amidotransferase-like LIS44_08250 IPR016143 Citrate synthase-like, small alpha subdomain LIS44_08250 IPR016142 Citrate synthase-like, large alpha subdomain LIS44_08250 IPR036969 Citrate synthase superfamily LIS44_08250 IPR002020 Citrate synthase LIS44_08250 IPR024176 Citrate synthase, bacterial-type LIS44_08250 IPR011278 2-methylcitrate synthase/citrate synthase type I LIS44_08250 IPR019810 Citrate synthase active site LIS44_08255 IPR040442 Pyruvate kinase-like domain superfamily LIS44_08255 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIS44_08255 IPR012695 2-methylisocitrate lyase LIS44_08255 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site LIS44_08255 IPR039556 ICL/PEPM domain LIS44_08260 IPR001647 DNA-binding HTH domain, TetR-type LIS44_08260 IPR009057 Homeobox-like domain superfamily LIS44_08260 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIS44_08265 IPR024904 Ornithine carbamoyltransferase LIS44_08265 IPR006130 Aspartate/ornithine carbamoyltransferase LIS44_08265 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain LIS44_08265 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily LIS44_08265 IPR002292 Ornithine/putrescine carbamoyltransferase LIS44_08265 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding LIS44_08285 IPR024474 Zinc-finger binding domain of transposase IS66 LIS44_08285 IPR004291 Transposase, IS66 LIS44_08285 IPR024463 Transposase TnpC, homeodomain LIS44_08285 IPR039552 Transposase IS66, C-terminal LIS44_08300 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_08300 IPR018368 ClpA/B, conserved site 1 LIS44_08300 IPR028299 ClpA/B, conserved site 2 LIS44_08300 IPR003959 ATPase, AAA-type, core LIS44_08300 IPR003593 AAA+ ATPase domain LIS44_08300 IPR036628 Clp, N-terminal domain superfamily LIS44_08300 IPR004176 Clp, N-terminal LIS44_08300 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA LIS44_08300 IPR001270 ClpA/B family LIS44_08300 IPR019489 Clp ATPase, C-terminal LIS44_08300 IPR041546 ClpA/ClpB, AAA lid domain LIS44_08305 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LIS44_08305 IPR003769 Adaptor protein ClpS, core LIS44_08305 IPR022935 ATP-dependent Clp protease adaptor protein ClpS LIS44_08315 IPR000534 Semialdehyde dehydrogenase, NAD-binding LIS44_08315 IPR036291 NAD(P)-binding domain superfamily LIS44_08315 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 LIS44_08315 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site LIS44_08315 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LIS44_08330 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup LIS44_08330 IPR004788 Ribose 5-phosphate isomerase, type A LIS44_08330 IPR037171 NagB/RpiA transferase-like LIS44_08335 IPR001926 Pyridoxal-phosphate dependent enzyme LIS44_08335 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LIS44_08335 IPR005787 Threonine dehydratase, biosynthetic LIS44_08335 IPR001721 Threonine dehydratase, ACT-like domain LIS44_08335 IPR038110 Threonine dehydratase, ACT-like domain superfamily LIS44_08335 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIS44_08340 IPR036291 NAD(P)-binding domain superfamily LIS44_08340 IPR006037 Regulator of K+ conductance, C-terminal LIS44_08340 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily LIS44_08340 IPR003148 Regulator of K+ conductance, N-terminal LIS44_08350 IPR003187 Phospholipase A1 LIS44_08350 IPR036541 Phospholipase A1 superfamily LIS44_08355 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like LIS44_08355 IPR011765 Peptidase M16, N-terminal LIS44_08355 IPR007863 Peptidase M16, C-terminal LIS44_08355 IPR013578 Peptidase M16C associated LIS44_08365 IPR011611 Carbohydrate kinase PfkB LIS44_08365 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site LIS44_08365 IPR029056 Ribokinase-like LIS44_08390 IPR027304 Trigger factor/SurA domain superfamily LIS44_08390 IPR023034 Peptidyl-prolyl isomerase SurA LIS44_08390 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LIS44_08390 IPR015391 SurA N-terminal LIS44_08395 IPR000119 Histone-like DNA-binding protein LIS44_08395 IPR020816 Histone-like DNA-binding protein, conserved site LIS44_08395 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LIS44_08410 IPR000944 Transcription regulator Rrf2-type LIS44_08410 IPR010242 Transcription factor HTH, IscR LIS44_08410 IPR030489 Transcription regulator Rrf2-type, conserved site LIS44_08410 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_08410 IPR036390 Winged helix DNA-binding domain superfamily LIS44_08415 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LIS44_08415 IPR000192 Aminotransferase class V domain LIS44_08415 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_08415 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_08415 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_08415 IPR016454 Cysteine desulfurase LIS44_08415 IPR010240 Cysteine desulfurase IscS LIS44_08420 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal LIS44_08420 IPR011339 ISC system FeS cluster assembly, IscU scaffold LIS44_08425 IPR000361 FeS cluster biogenesis LIS44_08425 IPR017870 FeS cluster insertion, C-terminal, conserved site LIS44_08425 IPR035903 HesB-like domain superfamily LIS44_08425 IPR011302 Iron-binding protein IscA, proteobacteria LIS44_08425 IPR016092 FeS cluster insertion protein LIS44_08430 IPR001623 DnaJ domain LIS44_08430 IPR036386 HscB, C-terminal domain superfamily LIS44_08430 IPR036869 Chaperone J-domain superfamily LIS44_08430 IPR004640 Co-chaperone Hsc20 LIS44_08430 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain LIS44_08435 IPR018181 Heat shock protein 70, conserved site LIS44_08435 IPR042039 HscA chaperone, nucleotide-binding domain LIS44_08435 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily LIS44_08435 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily LIS44_08435 IPR013126 Heat shock protein 70 family LIS44_08435 IPR010236 ISC system FeS cluster assembly, HscA chaperone LIS44_08440 IPR012675 Beta-grasp domain superfamily LIS44_08440 IPR018298 Adrenodoxin, iron-sulphur binding site LIS44_08440 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria LIS44_08440 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LIS44_08440 IPR036010 2Fe-2S ferredoxin-like superfamily LIS44_08440 IPR001055 Adrenodoxin LIS44_08445 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase LIS44_08445 IPR029787 Nucleotide cyclase LIS44_08465 IPR004708 Aspartate ammonia-lyase LIS44_08465 IPR024083 Fumarase/histidase, N-terminal LIS44_08465 IPR018951 Fumarase C, C-terminal LIS44_08465 IPR020557 Fumarate lyase, conserved site LIS44_08465 IPR000362 Fumarate lyase family LIS44_08465 IPR022761 Fumarate lyase, N-terminal LIS44_08465 IPR008948 L-Aspartase-like LIS44_08475 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_08475 IPR036390 Winged helix DNA-binding domain superfamily LIS44_08475 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LIS44_08475 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LIS44_08475 IPR011008 Dimeric alpha-beta barrel LIS44_08475 IPR000485 AsnC-type HTH domain LIS44_08475 IPR011991 ArsR-like helix-turn-helix domain LIS44_08475 IPR019888 Transcription regulator AsnC-type LIS44_08480 IPR029041 FAD-linked oxidoreductase-like LIS44_08480 IPR024082 Proline dehydrogenase PutA, domain II LIS44_08480 IPR002872 Proline dehydrogenase domain LIS44_08480 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain LIS44_08480 IPR010985 Ribbon-helix-helix LIS44_08480 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 LIS44_08480 IPR013321 Arc-type ribbon-helix-helix LIS44_08480 IPR024090 Proline dehydrogenase PutA, domain I LIS44_08480 IPR015590 Aldehyde dehydrogenase domain LIS44_08480 IPR016162 Aldehyde dehydrogenase, N-terminal LIS44_08480 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LIS44_08480 IPR016160 Aldehyde dehydrogenase, cysteine active site LIS44_08480 IPR016163 Aldehyde dehydrogenase, C-terminal LIS44_08480 IPR016161 Aldehyde/histidinol dehydrogenase LIS44_08480 IPR025703 Bifunctional protein PutA LIS44_08480 IPR024089 Proline dehydrogenase PutA, domain I/II LIS44_08485 IPR010280 (Uracil-5)-methyltransferase family LIS44_08485 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA LIS44_08485 IPR030390 RNA methyltransferase TrmA, active site LIS44_08485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_08485 IPR030391 RNA methyltransferase TrmA, conserved site LIS44_08520 IPR001598 Transposase, IS30, conserved site LIS44_08520 IPR036397 Ribonuclease H superfamily LIS44_08520 IPR012337 Ribonuclease H-like superfamily LIS44_08520 IPR001584 Integrase, catalytic core LIS44_08520 IPR009057 Homeobox-like domain superfamily LIS44_08530 IPR021134 Bestrophin/UPF0187 LIS44_08535 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily LIS44_08535 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIS44_08535 IPR004514 Glutamine-tRNA synthetase LIS44_08535 IPR022861 Glutamine-tRNA ligase, bacterial LIS44_08535 IPR000924 Glutamyl/glutaminyl-tRNA synthetase LIS44_08535 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain LIS44_08535 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain LIS44_08535 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily LIS44_08535 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal LIS44_08535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_08540 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain LIS44_08540 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site LIS44_08540 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase LIS44_08540 IPR029000 Cyclophilin-like domain superfamily LIS44_08545 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIS44_08545 IPR010138 UDP-2,3-diacylglucosamine hydrolase LIS44_08550 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase LIS44_08550 IPR005000 HpcH/HpaI aldolase/citrate lyase domain LIS44_08550 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales LIS44_08550 IPR040442 Pyruvate kinase-like domain superfamily LIS44_08550 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIS44_08555 IPR033878 Nitroreductase NfsB-like LIS44_08555 IPR029479 Nitroreductase LIS44_08555 IPR000415 Nitroreductase-like LIS44_08565 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype LIS44_08565 IPR000771 Fructose-bisphosphate aldolase, class-II LIS44_08565 IPR013785 Aldolase-type TIM barrel LIS44_08585 IPR029001 Inosine triphosphate pyrophosphatase-like LIS44_08585 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein LIS44_08590 IPR003347 JmjC domain LIS44_08590 IPR039994 JmjC domain-containing LIS44_08595 IPR007895 MASE1 LIS44_08595 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_08595 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_08595 IPR005467 Histidine kinase domain LIS44_08595 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain LIS44_08600 IPR000792 Transcription regulator LuxR, C-terminal LIS44_08600 IPR001789 Signal transduction response regulator, receiver domain LIS44_08600 IPR016032 Signal transduction response regulator, C-terminal effector LIS44_08600 IPR011006 CheY-like superfamily LIS44_08610 IPR010203 Regulator of ribonuclease activity A LIS44_08610 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LIS44_08610 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily LIS44_08620 IPR002583 Ribosomal protein S20 LIS44_08620 IPR036510 Ribosomal protein S20 superfamily LIS44_08630 IPR020583 Inositol monophosphatase, metal-binding site LIS44_08630 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ LIS44_08630 IPR000760 Inositol monophosphatase-like LIS44_08630 IPR020550 Inositol monophosphatase, conserved site LIS44_08635 IPR006439 HAD hydrolase, subfamily IA LIS44_08635 IPR036412 HAD-like superfamily LIS44_08635 IPR023214 HAD superfamily LIS44_08635 IPR041492 Haloacid dehalogenase-like hydrolase LIS44_08640 IPR036986 RNA-binding S4 domain superfamily LIS44_08640 IPR025708 Heat shock protein 15 LIS44_08640 IPR002942 RNA-binding S4 domain LIS44_08645 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface LIS44_08645 IPR003593 AAA+ ATPase domain LIS44_08645 IPR013765 DNA recombination and repair protein RecA LIS44_08645 IPR020584 DNA recombination/repair protein RecA, conserved site LIS44_08645 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_08645 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain LIS44_08645 IPR023400 DNA recombination and repair protein RecA, C-terminal LIS44_08650 IPR003783 Regulatory protein RecX LIS44_08650 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_08665 IPR018357 Hexapeptide transferase, conserved site LIS44_08665 IPR001451 Hexapeptide repeat LIS44_08665 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily LIS44_08665 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal LIS44_08665 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LIS44_08665 IPR011004 Trimeric LpxA-like superfamily LIS44_08670 IPR029069 HotDog domain superfamily LIS44_08670 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ LIS44_08670 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ LIS44_08675 IPR001451 Hexapeptide repeat LIS44_08675 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD LIS44_08675 IPR011004 Trimeric LpxA-like superfamily LIS44_08675 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region LIS44_08685 IPR034746 POTRA domain LIS44_08685 IPR039910 Surface antigen D15-like LIS44_08685 IPR023707 Outer membrane protein assembly factor BamA LIS44_08685 IPR000184 Bacterial surface antigen (D15) LIS44_08685 IPR010827 POTRA domain, BamA/TamA-like LIS44_08690 IPR001478 PDZ domain LIS44_08690 IPR041489 PDZ domain 6 LIS44_08690 IPR036034 PDZ superfamily LIS44_08690 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase LIS44_08690 IPR008915 Peptidase M50 LIS44_08695 IPR036169 DXP reductoisomerase, C-terminal domain superfamily LIS44_08695 IPR026877 DXP reductoisomerase C-terminal domain LIS44_08695 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal LIS44_08695 IPR036291 NAD(P)-binding domain superfamily LIS44_08695 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase LIS44_08695 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal LIS44_08700 IPR000374 Phosphatidate cytidylyltransferase LIS44_08705 IPR001441 Decaprenyl diphosphate synthase-like LIS44_08705 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site LIS44_08705 IPR036424 Decaprenyl diphosphate synthase-like superfamily LIS44_08710 IPR036191 RRF superfamily LIS44_08710 IPR023584 Ribosome recycling factor domain LIS44_08710 IPR002661 Ribosome recycling factor LIS44_08715 IPR036393 Acetylglutamate kinase-like superfamily LIS44_08715 IPR001048 Aspartate/glutamate/uridylate kinase LIS44_08715 IPR011817 Uridylate kinase LIS44_08715 IPR015963 Uridylate kinase, bacteria LIS44_08720 IPR002792 TRAM domain LIS44_08720 IPR023404 Radical SAM, alpha/beta horseshoe LIS44_08720 IPR007197 Radical SAM LIS44_08720 IPR005840 Ribosomal protein S12 methylthiotransferase RimO LIS44_08720 IPR038135 Methylthiotransferase, N-terminal domain superfamily LIS44_08720 IPR041582 RimO, TRAM domain LIS44_08720 IPR020612 Methylthiotransferase, conserved site LIS44_08720 IPR005839 Methylthiotransferase LIS44_08720 IPR013848 Methylthiotransferase, N-terminal LIS44_08720 IPR006638 Elp3/MiaB/NifB LIS44_08725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_08725 IPR013767 PAS fold LIS44_08725 IPR035965 PAS domain superfamily LIS44_08725 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_08725 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_08725 IPR000014 PAS domain LIS44_08725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_08725 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_08725 IPR005467 Histidine kinase domain LIS44_08730 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LIS44_08730 IPR025944 Sigma-54 interaction domain, conserved site LIS44_08730 IPR010114 DNA-binding transcriptional regulator NtrC LIS44_08730 IPR003593 AAA+ ATPase domain LIS44_08730 IPR011006 CheY-like superfamily LIS44_08730 IPR009057 Homeobox-like domain superfamily LIS44_08730 IPR002197 DNA binding HTH domain, Fis-type LIS44_08730 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_08730 IPR001789 Signal transduction response regulator, receiver domain LIS44_08730 IPR002078 RNA polymerase sigma factor 54 interaction domain LIS44_08730 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LIS44_08740 IPR036259 MFS transporter superfamily LIS44_08740 IPR011701 Major facilitator superfamily LIS44_08740 IPR020846 Major facilitator superfamily domain LIS44_08740 IPR005829 Sugar transporter, conserved site LIS44_08745 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related LIS44_08745 IPR020595 MnmG-related, conserved site LIS44_08745 IPR026904 GidA associated domain 3 LIS44_08745 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_08745 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG LIS44_08760 IPR004498 Ribosomal protein L11 methyltransferase LIS44_08760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_08770 IPR005412 DNA-binding protein Fis LIS44_08770 IPR009057 Homeobox-like domain superfamily LIS44_08770 IPR002197 DNA binding HTH domain, Fis-type LIS44_08775 IPR002695 Bifunctional purine biosynthesis protein PurH-like LIS44_08775 IPR011607 Methylglyoxal synthase-like domain LIS44_08775 IPR016193 Cytidine deaminase-like LIS44_08775 IPR024051 AICAR transformylase, duplicated domain superfamily LIS44_08775 IPR036914 Methylglyoxal synthase-like domain superfamily LIS44_08780 IPR011054 Rudiment single hybrid motif LIS44_08780 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal LIS44_08780 IPR020559 Phosphoribosylglycinamide synthetase, conserved site LIS44_08780 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily LIS44_08780 IPR000115 Phosphoribosylglycinamide synthetase LIS44_08780 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LIS44_08780 IPR016185 Pre-ATP-grasp domain superfamily LIS44_08780 IPR011761 ATP-grasp fold LIS44_08780 IPR020560 Phosphoribosylglycinamide synthetase, C-domain LIS44_08780 IPR013815 ATP-grasp fold, subdomain 1 LIS44_08790 IPR004872 Lipoprotein NlpA family LIS44_08795 IPR003593 AAA+ ATPase domain LIS44_08795 IPR026253 Methionine import ATP-binding protein MetN LIS44_08795 IPR003439 ABC transporter-like LIS44_08795 IPR017871 ABC transporter, conserved site LIS44_08795 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain LIS44_08795 IPR018449 NIL domain LIS44_08795 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_08795 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal LIS44_08800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_08800 IPR035906 MetI-like superfamily LIS44_08805 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain LIS44_08805 IPR040982 DNA polymerase III alpha subunit finger domain LIS44_08805 IPR029460 DNA polymerase, helix-hairpin-helix motif LIS44_08805 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type LIS44_08805 IPR004013 PHP domain LIS44_08805 IPR003141 Polymerase/histidinol phosphatase, N-terminal LIS44_08805 IPR016195 Polymerase/histidinol phosphatase-like LIS44_08805 IPR004805 DNA polymerase III, alpha subunit LIS44_08805 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain LIS44_08810 IPR029028 Alpha/beta knot methyltransferases LIS44_08810 IPR004384 RNA methyltransferase TrmJ/LasT LIS44_08810 IPR001537 tRNA/rRNA methyltransferase, SpoU type LIS44_08810 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIS44_08815 IPR011004 Trimeric LpxA-like superfamily LIS44_08815 IPR005881 Serine O-acetyltransferase LIS44_08815 IPR042122 Serine acetyltransferase, N-terminal domain superfamily LIS44_08815 IPR001451 Hexapeptide repeat LIS44_08815 IPR018357 Hexapeptide transferase, conserved site LIS44_08830 IPR005748 DNA mismatch repair protein MutS LIS44_08830 IPR007695 DNA mismatch repair protein MutS-like, N-terminal LIS44_08830 IPR017261 DNA mismatch repair protein MutS/MSH LIS44_08830 IPR000432 DNA mismatch repair protein MutS, C-terminal LIS44_08830 IPR007861 DNA mismatch repair protein MutS, clamp LIS44_08830 IPR007696 DNA mismatch repair protein MutS, core LIS44_08830 IPR016151 DNA mismatch repair protein MutS, N-terminal LIS44_08830 IPR036187 DNA mismatch repair protein MutS, core domain superfamily LIS44_08830 IPR007860 DNA mismatch repair protein MutS, connector domain LIS44_08830 IPR036678 MutS, connector domain superfamily LIS44_08830 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_08835 IPR022569 Ferredoxin, C-terminal LIS44_08835 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIS44_08835 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIS44_08835 IPR000813 7Fe ferredoxin LIS44_08845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_08845 IPR002935 Class I-like SAM-dependent O-methyltransferase LIS44_08850 IPR006015 Universal stress protein A family LIS44_08850 IPR006016 UspA LIS44_08870 IPR014340 Lipopolysaccharide export system protein LptA LIS44_08870 IPR005653 Organic solvent tolerance-like, N-terminal LIS44_08880 IPR036412 HAD-like superfamily LIS44_08880 IPR023214 HAD superfamily LIS44_08880 IPR010023 KdsC family LIS44_08885 IPR035474 KpsF-like, SIS domain LIS44_08885 IPR000644 CBS domain LIS44_08885 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type LIS44_08885 IPR001347 Sugar isomerase (SIS) LIS44_08895 IPR015803 Cysteine-tRNA ligase LIS44_08895 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR LIS44_08895 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase LIS44_08895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_08895 IPR032678 tRNA synthetases class I, catalytic domain LIS44_08895 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIS44_08905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_08905 IPR006015 Universal stress protein A family LIS44_08905 IPR006016 UspA LIS44_08915 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_08915 IPR004606 Molybdenum-pterin binding LIS44_08915 IPR005116 Transport-associated OB, type 1 LIS44_08915 IPR011868 Molybdate ABC transporter, ATP-binding protein LIS44_08915 IPR003439 ABC transporter-like LIS44_08915 IPR015852 ABC transporter, molybdenum import, ModC LIS44_08915 IPR008995 Molybdate/tungstate binding, C-terminal LIS44_08915 IPR003593 AAA+ ATPase domain LIS44_08915 IPR017871 ABC transporter, conserved site LIS44_08920 IPR011867 Molybdate ABC transporter, permease protein LIS44_08920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_08920 IPR035906 MetI-like superfamily LIS44_08925 IPR005950 Molybdate ABC transporter, substrate-binding protein LIS44_08930 IPR005110 MoeA, N-terminal and linker domain LIS44_08930 IPR036688 MoeA, C-terminal, domain IV superfamily LIS44_08930 IPR036135 MoeA, N-terminal and linker domain superfamily LIS44_08930 IPR038987 Molybdopterin biosynthesis protein MoeA-like LIS44_08930 IPR001453 MoaB/Mog domain LIS44_08930 IPR036425 MoaB/Mog-like domain superfamily LIS44_08930 IPR005111 MoeA, C-terminal, domain IV LIS44_08935 IPR036425 MoaB/Mog-like domain superfamily LIS44_08935 IPR001453 MoaB/Mog domain LIS44_08935 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA LIS44_08935 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily LIS44_08935 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain LIS44_08935 IPR023045 Molybdenum cofactor biosynthesis C LIS44_08940 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily LIS44_08940 IPR003448 Molybdopterin biosynthesis MoaE LIS44_08950 IPR007197 Radical SAM LIS44_08950 IPR010505 Molybdenum cofactor synthesis C-terminal LIS44_08950 IPR006638 Elp3/MiaB/NifB LIS44_08950 IPR013483 Molybdenum cofactor biosynthesis protein A LIS44_08950 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site LIS44_08950 IPR013785 Aldolase-type TIM barrel LIS44_08955 IPR025877 MobA-like NTP transferase LIS44_08955 IPR013482 Molybdenum cofactor guanylyltransferase LIS44_08955 IPR029044 Nucleotide-diphospho-sugar transferases LIS44_08960 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site LIS44_08960 IPR006656 Molybdopterin oxidoreductase LIS44_08960 IPR006657 Molybdopterin dinucleotide-binding domain LIS44_08960 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain LIS44_08960 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LIS44_08960 IPR007419 BFD-like [2Fe-2S]-binding domain LIS44_08960 IPR009010 Aspartate decarboxylase-like domain superfamily LIS44_08960 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain LIS44_08965 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal LIS44_08965 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LIS44_08965 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_08965 IPR023753 FAD/NAD(P)-binding domain LIS44_08965 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIS44_08965 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain LIS44_08965 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily LIS44_08965 IPR017121 Nitrite reductase [NAD(P)H], large subunit LIS44_08965 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain LIS44_08965 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site LIS44_08965 IPR007419 BFD-like [2Fe-2S]-binding domain LIS44_08965 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB LIS44_08970 IPR017121 Nitrite reductase [NAD(P)H], large subunit LIS44_08970 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal LIS44_08970 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site LIS44_08970 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain LIS44_08970 IPR007419 BFD-like [2Fe-2S]-binding domain LIS44_08970 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB LIS44_08970 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily LIS44_08970 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain LIS44_08970 IPR023753 FAD/NAD(P)-binding domain LIS44_08970 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_08970 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily LIS44_08975 IPR036259 MFS transporter superfamily LIS44_08975 IPR020846 Major facilitator superfamily domain LIS44_08975 IPR004737 Nitrate transporter LIS44_08975 IPR011701 Major facilitator superfamily LIS44_08985 IPR003593 AAA+ ATPase domain LIS44_08985 IPR003439 ABC transporter-like LIS44_08985 IPR017871 ABC transporter, conserved site LIS44_08985 IPR005890 Nitrate transport ATP-binding subunit C/D LIS44_08985 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_08995 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LIS44_08995 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LIS44_08995 IPR039697 Iron-type alcohol dehydrogenase-like LIS44_09005 IPR029016 GAF-like domain superfamily LIS44_09010 IPR015590 Aldehyde dehydrogenase domain LIS44_09010 IPR016162 Aldehyde dehydrogenase, N-terminal LIS44_09010 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LIS44_09010 IPR016163 Aldehyde dehydrogenase, C-terminal LIS44_09010 IPR016161 Aldehyde/histidinol dehydrogenase LIS44_09010 IPR016160 Aldehyde dehydrogenase, cysteine active site LIS44_09015 IPR025777 GMP synthetase ATP pyrophosphatase domain LIS44_09015 IPR022310 NAD/GMP synthase LIS44_09015 IPR022955 GMP synthase LIS44_09015 IPR004739 GMP synthase, glutamine amidotransferase LIS44_09015 IPR001674 GMP synthase, C-terminal LIS44_09015 IPR017926 Glutamine amidotransferase LIS44_09015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_09015 IPR029062 Class I glutamine amidotransferase-like LIS44_09020 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily LIS44_09020 IPR023480 Uncharacterised protein family UPF0312/YceI LIS44_09020 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LIS44_09045 IPR011008 Dimeric alpha-beta barrel LIS44_09045 IPR014910 Putative monooxygenase YdhR LIS44_09060 IPR004778 Homoserine/Threonine efflux protein LIS44_09060 IPR001123 Amino acid exporter protein, LeuE-type LIS44_09070 IPR012337 Ribonuclease H-like superfamily LIS44_09070 IPR036397 Ribonuclease H superfamily LIS44_09070 IPR002176 Crossover junction endodeoxyribonuclease RuvC LIS44_09070 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site LIS44_09080 IPR017968 Acylphosphatase, conserved site LIS44_09080 IPR020456 Acylphosphatase LIS44_09080 IPR036046 Acylphosphatase-like domain superfamily LIS44_09080 IPR001792 Acylphosphatase-like domain LIS44_09085 IPR036652 YjeF N-terminal domain superfamily LIS44_09085 IPR004443 YjeF N-terminal domain LIS44_09085 IPR029056 Ribokinase-like LIS44_09085 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase LIS44_09085 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr LIS44_09090 IPR009051 Alpha-helical ferredoxin LIS44_09090 IPR004453 Epoxyqueuosine reductase QueG LIS44_09090 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIS44_09090 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIS44_09090 IPR013542 Domain of unknown function DUF1730 LIS44_09105 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIS44_09105 IPR029052 Metallo-dependent phosphatase-like LIS44_09120 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_09120 IPR021961 Protein of unknown function DUF3578 LIS44_09120 IPR011704 ATPase, dynein-related, AAA domain LIS44_09120 IPR003593 AAA+ ATPase domain LIS44_09165 IPR036291 NAD(P)-binding domain superfamily LIS44_09165 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_09165 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_09170 IPR036291 NAD(P)-binding domain superfamily LIS44_09170 IPR013149 Alcohol dehydrogenase, C-terminal LIS44_09170 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site LIS44_09170 IPR020843 Polyketide synthase, enoylreductase domain LIS44_09170 IPR013154 Alcohol dehydrogenase, N-terminal LIS44_09170 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 LIS44_09170 IPR011032 GroES-like superfamily LIS44_09190 IPR024937 Domain X LIS44_09190 IPR000477 Reverse transcriptase domain LIS44_09215 IPR038488 Integrase, DNA-binding domain superfamily LIS44_09215 IPR010998 Integrase/recombinase, N-terminal LIS44_09215 IPR025166 Integrase, DNA-binding domain LIS44_09215 IPR002104 Integrase, catalytic domain LIS44_09215 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIS44_09215 IPR013762 Integrase-like, catalytic domain superfamily LIS44_09245 IPR027368 tRNA modification GTPase MnmE domain 2 LIS44_09245 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_09245 IPR031168 TrmE-type guanine nucleotide-binding domain LIS44_09245 IPR005225 Small GTP-binding protein domain LIS44_09245 IPR004520 tRNA modification GTPase MnmE LIS44_09245 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 LIS44_09245 IPR006073 GTP binding domain LIS44_09245 IPR018948 GTP-binding protein TrmE, N-terminal LIS44_09245 IPR025867 MnmE, helical domain LIS44_09250 IPR022812 Dynamin superfamily LIS44_09250 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_09250 IPR027094 Mitofusin family LIS44_09250 IPR030381 Dynamin-type guanine nucleotide-binding (G) domain LIS44_09260 IPR022547 ATPase, RavA, C-terminal LIS44_09260 IPR023671 ATPase RavA LIS44_09260 IPR011704 ATPase, dynein-related, AAA domain LIS44_09260 IPR003593 AAA+ ATPase domain LIS44_09260 IPR041538 ATPase RavA-like, AAA lid domain LIS44_09260 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_09295 IPR024474 Zinc-finger binding domain of transposase IS66 LIS44_09295 IPR039552 Transposase IS66, C-terminal LIS44_09295 IPR004291 Transposase, IS66 LIS44_09295 IPR024463 Transposase TnpC, homeodomain LIS44_09310 IPR010998 Integrase/recombinase, N-terminal LIS44_09310 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIS44_09310 IPR013762 Integrase-like, catalytic domain superfamily LIS44_09310 IPR002104 Integrase, catalytic domain LIS44_09310 IPR038488 Integrase, DNA-binding domain superfamily LIS44_09310 IPR025166 Integrase, DNA-binding domain LIS44_09315 IPR009057 Homeobox-like domain superfamily LIS44_09325 IPR024463 Transposase TnpC, homeodomain LIS44_09325 IPR024474 Zinc-finger binding domain of transposase IS66 LIS44_09325 IPR039552 Transposase IS66, C-terminal LIS44_09325 IPR004291 Transposase, IS66 LIS44_09330 IPR002104 Integrase, catalytic domain LIS44_09330 IPR013762 Integrase-like, catalytic domain superfamily LIS44_09330 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIS44_09330 IPR010998 Integrase/recombinase, N-terminal LIS44_09330 IPR025166 Integrase, DNA-binding domain LIS44_09330 IPR038488 Integrase, DNA-binding domain superfamily LIS44_09340 IPR019489 Clp ATPase, C-terminal LIS44_09340 IPR036628 Clp, N-terminal domain superfamily LIS44_09340 IPR004176 Clp, N-terminal LIS44_09340 IPR001270 ClpA/B family LIS44_09340 IPR018368 ClpA/B, conserved site 1 LIS44_09340 IPR028299 ClpA/B, conserved site 2 LIS44_09340 IPR041546 ClpA/ClpB, AAA lid domain LIS44_09340 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_09340 IPR001943 UVR domain LIS44_09340 IPR003593 AAA+ ATPase domain LIS44_09340 IPR003959 ATPase, AAA-type, core LIS44_09405 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_09405 IPR021810 Protein of unknown function DUF3387 LIS44_09405 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIS44_09405 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal LIS44_09405 IPR004473 Restriction endonuclease, type I, HsdR LIS44_09405 IPR040980 SWI2/SNF2 ATPase LIS44_09415 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily LIS44_09415 IPR003356 DNA methylase, adenine-specific LIS44_09415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_09455 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC LIS44_09455 IPR013216 Methyltransferase type 11 LIS44_09455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_09485 IPR002104 Integrase, catalytic domain LIS44_09485 IPR004107 Integrase, SAM-like, N-terminal LIS44_09485 IPR010998 Integrase/recombinase, N-terminal LIS44_09485 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIS44_09485 IPR013762 Integrase-like, catalytic domain superfamily LIS44_09525 IPR017856 Integrase-like, N-terminal LIS44_09525 IPR002876 Transcriptional regulator TACO1-like LIS44_09525 IPR026564 Transcriptional regulator TACO1-like, domain 3 LIS44_09525 IPR029072 YebC-like LIS44_09540 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_09540 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_09540 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_09540 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain LIS44_09540 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_09550 IPR036661 Luciferase-like domain superfamily LIS44_09550 IPR011251 Luciferase-like domain LIS44_09550 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A LIS44_09555 IPR004872 Lipoprotein NlpA family LIS44_09565 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_09565 IPR035906 MetI-like superfamily LIS44_09570 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_09570 IPR004095 TGS LIS44_09570 IPR012676 TGS-like LIS44_09570 IPR023192 TGS-like domain superfamily LIS44_09570 IPR013029 YchF, C-terminal domain LIS44_09570 IPR041706 YchF, N-terminal LIS44_09570 IPR031167 OBG-type guanine nucleotide-binding (G) domain LIS44_09570 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 LIS44_09570 IPR006073 GTP binding domain LIS44_09570 IPR012675 Beta-grasp domain superfamily LIS44_09595 IPR011606 Branched-chain amino acid transport, permease LIS44_09600 IPR008407 Branched-chain amino acid transport, AzlD LIS44_09605 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase LIS44_09605 IPR011054 Rudiment single hybrid motif LIS44_09605 IPR016185 Pre-ATP-grasp domain superfamily LIS44_09605 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type LIS44_09605 IPR011761 ATP-grasp fold LIS44_09605 IPR013815 ATP-grasp fold, subdomain 1 LIS44_09610 IPR003607 HD/PDEase domain LIS44_09610 IPR006674 HD domain LIS44_09610 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase LIS44_09610 IPR002934 Polymerase, nucleotidyl transferase domain LIS44_09610 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme LIS44_09610 IPR002912 ACT domain LIS44_09615 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ LIS44_09615 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_09615 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_09615 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_09615 IPR004839 Aminotransferase, class I/classII LIS44_09620 IPR029760 Glutathione peroxidase conserved site LIS44_09620 IPR036249 Thioredoxin-like superfamily LIS44_09620 IPR000889 Glutathione peroxidase LIS44_09620 IPR029759 Glutathione peroxidase active site LIS44_09625 IPR028427 Peptide methionine sulfoxide reductase LIS44_09625 IPR002579 Peptide methionine sulphoxide reductase MrsB LIS44_09625 IPR011057 Mss4-like superfamily LIS44_09630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_09630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_09630 IPR004839 Aminotransferase, class I/classII LIS44_09630 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_09635 IPR002656 Acyltransferase 3 LIS44_09635 IPR036514 SGNH hydrolase superfamily LIS44_09655 IPR024084 Isopropylmalate dehydrogenase-like domain LIS44_09655 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site LIS44_09655 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic LIS44_09660 IPR006145 Pseudouridine synthase, RsuA/RluA LIS44_09660 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIS44_09660 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain LIS44_09660 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site LIS44_09660 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F LIS44_09670 IPR012338 Beta-lactamase/transpeptidase-like LIS44_09670 IPR015956 Penicillin-binding protein, C-terminal domain superfamily LIS44_09670 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIS44_09670 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal LIS44_09670 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily LIS44_09670 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIS44_09675 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LIS44_09680 IPR036390 Winged helix DNA-binding domain superfamily LIS44_09680 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_09680 IPR012318 Crp-type HTH domain LIS44_09680 IPR000595 Cyclic nucleotide-binding domain LIS44_09680 IPR018490 Cyclic nucleotide-binding-like LIS44_09680 IPR014710 RmlC-like jelly roll fold LIS44_09690 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily LIS44_09690 IPR028625 Regulator of nucleoside diphosphate kinase LIS44_09690 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain LIS44_09690 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal LIS44_09690 IPR023459 Transcription elongation factor GreA/GreB family LIS44_09695 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_09695 IPR001085 Serine hydroxymethyltransferase LIS44_09695 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_09695 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site LIS44_09695 IPR039429 Serine hydroxymethyltransferase-like domain LIS44_09695 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_09705 IPR036397 Ribonuclease H superfamily LIS44_09705 IPR009057 Homeobox-like domain superfamily LIS44_09705 IPR001584 Integrase, catalytic core LIS44_09705 IPR012337 Ribonuclease H-like superfamily LIS44_09705 IPR001598 Transposase, IS30, conserved site LIS44_09730 IPR002781 Transmembrane protein TauE-like LIS44_09735 IPR002563 Flavin reductase like domain LIS44_09735 IPR012349 FMN-binding split barrel LIS44_09735 IPR019917 FMN reductase (NADH) RutF LIS44_09740 IPR006276 Cobalamin-independent methionine synthase LIS44_09740 IPR038071 UROD/MetE-like superfamily LIS44_09740 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal LIS44_09740 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal LIS44_09755 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_09755 IPR010354 Oleate hydratase LIS44_09765 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_09765 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_09765 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_09765 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_09765 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_09765 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain LIS44_09770 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain LIS44_09770 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_09770 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily LIS44_09770 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_09770 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal LIS44_09775 IPR011251 Luciferase-like domain LIS44_09775 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A LIS44_09775 IPR036661 Luciferase-like domain superfamily LIS44_09790 IPR000101 Gamma-glutamyltranspeptidase LIS44_09790 IPR029055 Nucleophile aminohydrolases, N-terminal LIS44_09820 IPR025758 Fic/DOC N-terminal LIS44_09820 IPR003812 Fido domain LIS44_09820 IPR036597 Fido-like domain superfamily LIS44_09820 IPR040198 Fido domain-containing protein LIS44_09820 IPR026287 Protein adenylyltransferase SoFic-like LIS44_09905 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_09905 IPR017871 ABC transporter, conserved site LIS44_09905 IPR003439 ABC transporter-like LIS44_09905 IPR003593 AAA+ ATPase domain LIS44_09910 IPR013525 ABC-2 type transporter LIS44_09910 IPR000412 ABC-2 transporter LIS44_09915 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal LIS44_09915 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF LIS44_09915 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 LIS44_09925 IPR023346 Lysozyme-like domain superfamily LIS44_09925 IPR011757 Lytic transglycosylase MltB LIS44_09925 IPR031304 Transglycosylase SLT domain 2 LIS44_09930 IPR007730 Sporulation-like domain LIS44_09930 IPR012997 Rare lipoprotein A LIS44_09930 IPR036908 RlpA-like domain superfamily LIS44_09930 IPR009009 RlpA-like protein, double-psi beta-barrel domain LIS44_09930 IPR034718 Endolytic peptidoglycan transglycosylase RlpA LIS44_09945 IPR036402 Elongation factor Ts, dimerisation domain superfamily LIS44_09945 IPR001816 Translation elongation factor EFTs/EF1B LIS44_09945 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation LIS44_09945 IPR018101 Translation elongation factor Ts, conserved site LIS44_09945 IPR009060 UBA-like superfamily LIS44_09950 IPR018130 Ribosomal protein S2, conserved site LIS44_09950 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid LIS44_09950 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily LIS44_09950 IPR001865 Ribosomal protein S2 LIS44_09955 IPR000994 Peptidase M24 LIS44_09955 IPR036005 Creatinase/aminopeptidase-like LIS44_09955 IPR001714 Peptidase M24, methionine aminopeptidase LIS44_09955 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 LIS44_09965 IPR004839 Aminotransferase, class I/classII LIS44_09965 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site LIS44_09965 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_09965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_09965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_09970 IPR000620 EamA domain LIS44_09980 IPR024937 Domain X LIS44_09980 IPR000477 Reverse transcriptase domain LIS44_10005 IPR036034 PDZ superfamily LIS44_10005 IPR001478 PDZ domain LIS44_10005 IPR011782 Peptidase S1C, Do LIS44_10005 IPR009003 Peptidase S1, PA clan LIS44_10005 IPR001940 Peptidase S1C LIS44_10010 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LIS44_10010 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily LIS44_10015 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily LIS44_10015 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily LIS44_10015 IPR019831 Manganese/iron superoxide dismutase, N-terminal LIS44_10015 IPR019833 Manganese/iron superoxide dismutase, binding site LIS44_10015 IPR001189 Manganese/iron superoxide dismutase LIS44_10015 IPR019832 Manganese/iron superoxide dismutase, C-terminal LIS44_10080 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_10080 IPR000847 Transcription regulator HTH, LysR LIS44_10080 IPR005119 LysR, substrate-binding LIS44_10080 IPR036390 Winged helix DNA-binding domain superfamily LIS44_10085 IPR000537 UbiA prenyltransferase family LIS44_10085 IPR039653 Prenyltransferase LIS44_10085 IPR006370 4-hydroxybenzoate polyprenyltransferase-like LIS44_10090 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily LIS44_10090 IPR007440 Chorismate--pyruvate lyase LIS44_10100 IPR027302 Glutamine synthetase, N-terminal conserved site LIS44_10100 IPR001637 Glutamine synthetase class-I, adenylation site LIS44_10100 IPR027303 Glutamine synthetase, glycine-rich site LIS44_10100 IPR008146 Glutamine synthetase, catalytic domain LIS44_10100 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LIS44_10100 IPR004809 Glutamine synthetase type I LIS44_10100 IPR036651 Glutamine synthetase, N-terminal domain superfamily LIS44_10100 IPR008147 Glutamine synthetase, beta-Grasp domain LIS44_10105 IPR029062 Class I glutamine amidotransferase-like LIS44_10105 IPR017926 Glutamine amidotransferase LIS44_10105 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain LIS44_10110 IPR005940 Anthranilate phosphoribosyl transferase LIS44_10110 IPR000312 Glycosyl transferase, family 3 LIS44_10110 IPR017459 Glycosyl transferase family 3, N-terminal domain LIS44_10110 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily LIS44_10110 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily LIS44_10115 IPR011060 Ribulose-phosphate binding barrel LIS44_10115 IPR013785 Aldolase-type TIM barrel LIS44_10115 IPR013798 Indole-3-glycerol phosphate synthase LIS44_10115 IPR001468 Indole-3-glycerol phosphate synthase, conserved site LIS44_10125 IPR020602 GTP cyclohydrolase I domain LIS44_10125 IPR018234 GTP cyclohydrolase I, conserved site LIS44_10125 IPR001474 GTP cyclohydrolase I LIS44_10150 IPR008535 Protein of unknown function DUF817 LIS44_10155 IPR006361 Uroporphyrinogen decarboxylase HemE LIS44_10155 IPR038071 UROD/MetE-like superfamily LIS44_10155 IPR000257 Uroporphyrinogen decarboxylase (URO-D) LIS44_10165 IPR011051 RmlC-like cupin domain superfamily LIS44_10165 IPR014710 RmlC-like jelly roll fold LIS44_10165 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain LIS44_10165 IPR003829 Pirin, N-terminal domain LIS44_10165 IPR012093 Pirin LIS44_10180 IPR005119 LysR, substrate-binding LIS44_10180 IPR036390 Winged helix DNA-binding domain superfamily LIS44_10180 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_10180 IPR000847 Transcription regulator HTH, LysR LIS44_10210 IPR038717 Tc1-like transposase, DDE domain LIS44_10230 IPR003317 Cytochrome ubiquinol oxidase subunit 2 LIS44_10235 IPR002585 Cytochrome ubiquinol oxidase subunit 1 LIS44_10275 IPR023753 FAD/NAD(P)-binding domain LIS44_10275 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_10275 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LIS44_10275 IPR013785 Aldolase-type TIM barrel LIS44_10280 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal LIS44_10280 IPR006094 FAD linked oxidase, N-terminal LIS44_10280 IPR016164 FAD-linked oxidase-like, C-terminal LIS44_10280 IPR016169 FAD-binding, type PCMH, subdomain 2 LIS44_10280 IPR016167 FAD-binding, type PCMH, subdomain 1 LIS44_10280 IPR036318 FAD-binding, type PCMH-like superfamily LIS44_10280 IPR016166 FAD-binding domain, PCMH-type LIS44_10280 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 LIS44_10280 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 LIS44_10280 IPR012256 D-lactate dehydrogenase LIS44_10285 IPR013785 Aldolase-type TIM barrel LIS44_10285 IPR000262 FMN-dependent dehydrogenase LIS44_10285 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site LIS44_10285 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent LIS44_10285 IPR020920 L-lactate dehydrogenase, bacterial LIS44_10285 IPR037396 FMN hydroxy acid dehydrogenase domain LIS44_10290 IPR008920 Transcription regulator FadR/GntR, C-terminal LIS44_10290 IPR000524 Transcription regulator HTH, GntR LIS44_10290 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_10290 IPR036390 Winged helix DNA-binding domain superfamily LIS44_10290 IPR011711 GntR, C-terminal LIS44_10295 IPR003804 L-lactate permease LIS44_10300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_10300 IPR023437 Argininosuccinate synthase, type 2 subfamily LIS44_10300 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail LIS44_10300 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body LIS44_10300 IPR023434 Argininosuccinate synthase, type 1 subfamily LIS44_10300 IPR018223 Argininosuccinate synthase, conserved site LIS44_10300 IPR001518 Argininosuccinate synthase LIS44_10305 IPR001633 EAL domain LIS44_10305 IPR035919 EAL domain superfamily LIS44_10305 IPR003018 GAF domain LIS44_10305 IPR029016 GAF-like domain superfamily LIS44_10305 IPR000160 GGDEF domain LIS44_10305 IPR029787 Nucleotide cyclase LIS44_10305 IPR016132 Phytochrome chromophore attachment domain LIS44_10305 IPR001294 Phytochrome LIS44_10305 IPR013515 Phytochrome, central region LIS44_10315 IPR013520 Exonuclease, RNase T/DNA polymerase III LIS44_10315 IPR036397 Ribonuclease H superfamily LIS44_10315 IPR012337 Ribonuclease H-like superfamily LIS44_10315 IPR005987 Ribonuclease T LIS44_10330 IPR004840 Amino acid permease, conserved site LIS44_10330 IPR004841 Amino acid permease/ SLC12A domain LIS44_10350 IPR023753 FAD/NAD(P)-binding domain LIS44_10350 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_10350 IPR013785 Aldolase-type TIM barrel LIS44_10350 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LIS44_10355 IPR003439 ABC transporter-like LIS44_10355 IPR017871 ABC transporter, conserved site LIS44_10355 IPR003593 AAA+ ATPase domain LIS44_10355 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_10355 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal LIS44_10360 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LIS44_10360 IPR035906 MetI-like superfamily LIS44_10360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_10365 IPR035906 MetI-like superfamily LIS44_10365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_10370 IPR000914 Solute-binding protein family 5 domain LIS44_10370 IPR030678 Peptide/nickel binding protein, MppA-type LIS44_10370 IPR039424 Solute-binding protein family 5 LIS44_10375 IPR008258 Transglycosylase SLT domain 1 LIS44_10375 IPR000189 Prokaryotic transglycosylase, active site LIS44_10375 IPR023346 Lysozyme-like domain superfamily LIS44_10375 IPR036779 LysM domain superfamily LIS44_10375 IPR018392 LysM domain LIS44_10380 IPR006309 DNA polymerase 3, epsilon subunit LIS44_10380 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain LIS44_10380 IPR012337 Ribonuclease H-like superfamily LIS44_10380 IPR036397 Ribonuclease H superfamily LIS44_10380 IPR013520 Exonuclease, RNase T/DNA polymerase III LIS44_10390 IPR015376 Zinc ribbon, NADH pyrophosphatase LIS44_10390 IPR000086 NUDIX hydrolase domain LIS44_10390 IPR015797 NUDIX hydrolase-like domain superfamily LIS44_10390 IPR020084 NUDIX hydrolase, conserved site LIS44_10390 IPR022925 NADH pyrophosphatase NudC LIS44_10400 IPR007055 BON domain LIS44_10400 IPR014004 Transport-associated and nodulation domain, bacteria LIS44_10405 IPR003509 Uncharacterised protein family UPF0102 LIS44_10405 IPR011335 Restriction endonuclease type II-like LIS44_10405 IPR011856 tRNA endonuclease-like domain superfamily LIS44_10415 IPR008189 rRNA small subunit methyltransferase I LIS44_10415 IPR014776 Tetrapyrrole methylase, subdomain 2 LIS44_10415 IPR018063 SAM-dependent methyltransferase RsmI, conserved site LIS44_10415 IPR035996 Tetrapyrrole methylase superfamily LIS44_10415 IPR000878 Tetrapyrrole methylase LIS44_10415 IPR014777 Tetrapyrrole methylase, subdomain 1 LIS44_10425 IPR002938 FAD-binding domain LIS44_10425 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site LIS44_10425 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 LIS44_10425 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_10430 IPR002938 FAD-binding domain LIS44_10430 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_10430 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site LIS44_10430 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase LIS44_10430 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 LIS44_10435 IPR007211 Protein of unknown function DUF378 LIS44_10445 IPR011978 Uncharacterised protein family UPF0149 LIS44_10445 IPR036255 YgfB-like superfamily LIS44_10470 IPR009061 Putative DNA-binding domain superfamily LIS44_10470 IPR011794 Hg(II)-responsive transcriptional regulator LIS44_10470 IPR000551 MerR-type HTH domain LIS44_10475 IPR002698 5-formyltetrahydrofolate cyclo-ligase LIS44_10475 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily LIS44_10475 IPR037171 NagB/RpiA transferase-like LIS44_10480 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_10480 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_10480 IPR015947 PUA-like superfamily LIS44_10480 IPR008268 Peptidase S16, active site LIS44_10480 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_10480 IPR008269 Peptidase S16, Lon proteolytic domain LIS44_10480 IPR027065 Lon protease LIS44_10480 IPR004815 Lon protease, bacterial/eukaryotic-type LIS44_10480 IPR027543 Lon protease, bacterial LIS44_10480 IPR003959 ATPase, AAA-type, core LIS44_10480 IPR003593 AAA+ ATPase domain LIS44_10480 IPR003111 Lon, substrate-binding domain LIS44_10490 IPR029028 Alpha/beta knot methyltransferases LIS44_10490 IPR003742 RNA methyltransferase RlmH LIS44_10490 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIS44_10495 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type LIS44_10495 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B LIS44_10510 IPR007202 4Fe-4S domain LIS44_10510 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIS44_10510 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIS44_10510 IPR011005 Dihydropteroate synthase-like LIS44_10510 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB LIS44_10510 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria LIS44_10515 IPR005759 Endonuclease III LIS44_10515 IPR000445 Helix-hairpin-helix motif LIS44_10515 IPR003265 HhH-GPD domain LIS44_10515 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LIS44_10515 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif LIS44_10515 IPR004036 Endonuclease III-like, conserved site-2 LIS44_10515 IPR011257 DNA glycosylase LIS44_10515 IPR004035 Endonuclease III, iron-sulphur binding site LIS44_10525 IPR006259 Adenylate kinase subfamily LIS44_10525 IPR000850 Adenylate kinase/UMP-CMP kinase LIS44_10525 IPR033690 Adenylate kinase, conserved site LIS44_10525 IPR007862 Adenylate kinase, active site lid domain LIS44_10525 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_10540 IPR012338 Beta-lactamase/transpeptidase-like LIS44_10540 IPR005311 Penicillin-binding protein, dimerisation domain LIS44_10540 IPR036138 Penicillin-binding protein, dimerisation domain superfamily LIS44_10540 IPR001460 Penicillin-binding protein, transpeptidase LIS44_10540 IPR017790 Penicillin-binding protein 2 LIS44_10545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_10545 IPR004398 RNA methyltransferase, RsmD LIS44_10545 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LIS44_10620 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LIS44_10620 IPR006664 Outer membrane protein, bacterial LIS44_10620 IPR002368 Outer membrane protein, OmpA LIS44_10620 IPR006665 OmpA-like domain LIS44_10620 IPR006690 Outer membrane protein, OmpA-like, conserved site LIS44_10620 IPR036737 OmpA-like domain superfamily LIS44_10620 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LIS44_10635 IPR039562 Membrane fusion protein, biotin-lipoyl like domain LIS44_10635 IPR006144 Secretion protein HlyD, conserved site LIS44_10635 IPR010129 Type I secretion membrane fusion protein, HlyD family LIS44_10640 IPR039421 Type I protein exporter LIS44_10640 IPR039395 Peptidase C39-like A LIS44_10640 IPR005074 Peptidase C39, bacteriocin processing LIS44_10640 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_10640 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIS44_10640 IPR017871 ABC transporter, conserved site LIS44_10640 IPR003439 ABC transporter-like LIS44_10640 IPR011527 ABC transporter type 1, transmembrane domain LIS44_10640 IPR003593 AAA+ ATPase domain LIS44_10640 IPR010132 ATPase, type I secretion system, HlyB LIS44_10645 IPR003423 Outer membrane efflux protein LIS44_10645 IPR010130 Type I secretion outer membrane protein, TolC LIS44_10650 IPR005594 YadA-like, C-terminal LIS44_10650 IPR011049 Serralysin-like metalloprotease, C-terminal LIS44_10650 IPR008640 Head domain of trimeric autotransporter adhesin LIS44_10650 IPR008635 Coiled stalk of trimeric autotransporter adhesin LIS44_10650 IPR024973 ESPR domain LIS44_10665 IPR018370 Chaperonin Cpn60, conserved site LIS44_10665 IPR001844 Chaperonin Cpn60 LIS44_10665 IPR002423 Chaperonin Cpn60/TCP-1 family LIS44_10665 IPR027409 GroEL-like apical domain superfamily LIS44_10665 IPR027413 GroEL-like equatorial domain superfamily LIS44_10665 IPR027410 TCP-1-like chaperonin intermediate domain superfamily LIS44_10670 IPR011032 GroES-like superfamily LIS44_10670 IPR037124 GroES chaperonin superfamily LIS44_10670 IPR020818 GroES chaperonin family LIS44_10670 IPR018369 Chaperonin GroES, conserved site LIS44_10680 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal LIS44_10680 IPR001206 Diacylglycerol kinase, catalytic domain LIS44_10680 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily LIS44_10705 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_10705 IPR004498 Ribosomal protein L11 methyltransferase LIS44_10710 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LIS44_10710 IPR036291 NAD(P)-binding domain superfamily LIS44_10710 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LIS44_10710 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase LIS44_10710 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site LIS44_10735 IPR006162 Phosphopantetheine attachment site LIS44_10735 IPR042104 Polyketide synthase, dehydratase domain superfamily LIS44_10735 IPR009081 Phosphopantetheine binding ACP domain LIS44_10735 IPR020806 Polyketide synthase, phosphopantetheine-binding domain LIS44_10735 IPR013968 Polyketide synthase, ketoreductase domain LIS44_10735 IPR020843 Polyketide synthase, enoylreductase domain LIS44_10735 IPR020807 Polyketide synthase, dehydratase domain LIS44_10735 IPR036736 ACP-like superfamily LIS44_10735 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding LIS44_10735 IPR011032 GroES-like superfamily LIS44_10735 IPR013154 Alcohol dehydrogenase, N-terminal LIS44_10735 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LIS44_10735 IPR014043 Acyl transferase LIS44_10735 IPR001227 Acyl transferase domain superfamily LIS44_10735 IPR036291 NAD(P)-binding domain superfamily LIS44_10745 IPR005746 Thioredoxin LIS44_10745 IPR036249 Thioredoxin-like superfamily LIS44_10745 IPR017937 Thioredoxin, conserved site LIS44_10745 IPR013766 Thioredoxin domain LIS44_10765 IPR005149 Transcription regulator PadR, N-terminal LIS44_10765 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_10765 IPR036390 Winged helix DNA-binding domain superfamily LIS44_10775 IPR002589 Macro domain LIS44_10780 IPR031157 Tr-type G domain, conserved site LIS44_10780 IPR002891 Adenylyl-sulfate kinase LIS44_10780 IPR005225 Small GTP-binding protein domain LIS44_10780 IPR011779 Sulphate adenylyltransferase, large subunit LIS44_10780 IPR000795 Transcription factor, GTP-binding domain LIS44_10780 IPR009000 Translation protein, beta-barrel domain superfamily LIS44_10780 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LIS44_10780 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain LIS44_10780 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_10785 IPR002500 Phosphoadenosine phosphosulphate reductase LIS44_10785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_10785 IPR011784 Sulphate adenylyltransferase, small subunit LIS44_10800 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal LIS44_10800 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIS44_10800 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB LIS44_10800 IPR002509 NodB homology domain LIS44_10810 IPR001173 Glycosyltransferase 2-like LIS44_10810 IPR029044 Nucleotide-diphospho-sugar transferases LIS44_10810 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA LIS44_10815 IPR002509 NodB homology domain LIS44_10815 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel LIS44_10815 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal LIS44_10815 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB LIS44_10825 IPR021027 Transposase, putative, helix-turn-helix domain LIS44_10825 IPR010095 Transposase IS605, OrfB, C-terminal LIS44_10825 IPR001959 Probable transposase, IS891/IS1136/IS1341 LIS44_10830 IPR005811 ATP-citrate lyase/succinyl-CoA ligase LIS44_10830 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site LIS44_10830 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site LIS44_10830 IPR003781 CoA-binding LIS44_10830 IPR005810 Succinyl-CoA ligase, alpha subunit LIS44_10830 IPR036291 NAD(P)-binding domain superfamily LIS44_10830 IPR016102 Succinyl-CoA synthetase-like LIS44_10835 IPR013815 ATP-grasp fold, subdomain 1 LIS44_10835 IPR016102 Succinyl-CoA synthetase-like LIS44_10835 IPR005809 Succinate--CoA synthetase, beta subunit LIS44_10835 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type LIS44_10835 IPR011761 ATP-grasp fold LIS44_10835 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site LIS44_10835 IPR005811 ATP-citrate lyase/succinyl-CoA ligase LIS44_10840 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_10840 IPR023753 FAD/NAD(P)-binding domain LIS44_10840 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIS44_10840 IPR006258 Dihydrolipoamide dehydrogenase LIS44_10840 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I LIS44_10840 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LIS44_10840 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site LIS44_10845 IPR036625 E3-binding domain superfamily LIS44_10845 IPR006255 Dihydrolipoamide succinyltransferase LIS44_10845 IPR011053 Single hybrid motif LIS44_10845 IPR004167 Peripheral subunit-binding domain LIS44_10845 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LIS44_10845 IPR000089 Biotin/lipoyl attachment LIS44_10845 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain LIS44_10845 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily LIS44_10850 IPR005475 Transketolase-like, pyrimidine-binding domain LIS44_10850 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily LIS44_10850 IPR029061 Thiamin diphosphate-binding fold LIS44_10850 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal LIS44_10850 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain LIS44_10850 IPR011603 2-oxoglutarate dehydrogenase E1 component LIS44_10850 IPR001017 Dehydrogenase, E1 component LIS44_10855 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal LIS44_10855 IPR012675 Beta-grasp domain superfamily LIS44_10855 IPR009051 Alpha-helical ferredoxin LIS44_10855 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIS44_10855 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein LIS44_10855 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain LIS44_10855 IPR036010 2Fe-2S ferredoxin-like superfamily LIS44_10855 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIS44_10860 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit LIS44_10860 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal LIS44_10860 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily LIS44_10860 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily LIS44_10860 IPR011281 Succinate dehydrogenase, flavoprotein subunit LIS44_10860 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_10860 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LIS44_10860 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site LIS44_10865 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LIS44_10865 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor LIS44_10865 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit LIS44_10870 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit LIS44_10870 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site LIS44_10870 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit LIS44_10870 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit LIS44_10875 IPR010953 Citrate synthase, type I LIS44_10875 IPR036969 Citrate synthase superfamily LIS44_10875 IPR024176 Citrate synthase, bacterial-type LIS44_10875 IPR019810 Citrate synthase active site LIS44_10875 IPR016143 Citrate synthase-like, small alpha subdomain LIS44_10875 IPR016142 Citrate synthase-like, large alpha subdomain LIS44_10875 IPR002020 Citrate synthase LIS44_10885 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal LIS44_10885 IPR006531 Gp5 N-terminal LIS44_10885 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain LIS44_10885 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset LIS44_10885 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein LIS44_10885 IPR037026 Vgr protein, OB-fold domain superfamily LIS44_10890 IPR003694 NAD(+) synthetase LIS44_10890 IPR000132 Nitrilase/cyanide hydratase, conserved site LIS44_10890 IPR014445 Glutamine-dependent NAD(+) synthetase LIS44_10890 IPR022310 NAD/GMP synthase LIS44_10890 IPR003010 Carbon-nitrogen hydrolase LIS44_10890 IPR036526 Carbon-nitrogen hydrolase superfamily LIS44_10890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_10920 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIS44_10920 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LIS44_10925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_10925 IPR001980 Phosphopantetheine adenylyltransferase LIS44_10925 IPR004821 Cytidyltransferase-like domain LIS44_10930 IPR020081 SsrA-binding protein, conserved site LIS44_10930 IPR000037 SsrA-binding protein LIS44_10930 IPR023620 Small protein B LIS44_10935 IPR005025 NADPH-dependent FMN reductase-like LIS44_10935 IPR029039 Flavoprotein-like superfamily LIS44_10935 IPR008254 Flavodoxin/nitric oxide synthase LIS44_10940 IPR003730 Multi-copper polyphenol oxidoreductase LIS44_10940 IPR038371 Multi-copper polyphenol oxidoreductase superfamily LIS44_10940 IPR011324 Cytotoxic necrotizing factor-like, catalytic LIS44_10945 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LIS44_10945 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIS44_10945 IPR006225 Pseudouridine synthase, RluC/RluD LIS44_10945 IPR036986 RNA-binding S4 domain superfamily LIS44_10945 IPR002942 RNA-binding S4 domain LIS44_10945 IPR006145 Pseudouridine synthase, RsuA/RluA LIS44_10950 IPR011990 Tetratricopeptide-like helical domain superfamily LIS44_10950 IPR039565 Outer membrane lipoprotein BamD-like LIS44_10950 IPR017689 Outer membrane protein assembly factor BamD LIS44_10955 IPR006171 TOPRIM domain LIS44_10955 IPR006295 DNA primase, DnaG LIS44_10955 IPR036977 DNA Primase, CHC2-type zinc finger LIS44_10955 IPR030846 DNA primase DnaG, bacteria LIS44_10955 IPR002694 Zinc finger, CHC2-type LIS44_10955 IPR013173 DNA primase DnaG, DnaB-binding domain LIS44_10955 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily LIS44_10955 IPR019475 DNA primase, DnaB-helicase binding domain LIS44_10955 IPR034151 Bacterial DnaG primase, TOPRIM domain LIS44_10955 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LIS44_10955 IPR013264 DNA primase, catalytic core, N-terminal LIS44_10960 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase LIS44_10960 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain LIS44_10960 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal LIS44_10960 IPR018214 Glutamyl-tRNA reductase, conserved site LIS44_10960 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily LIS44_10960 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily LIS44_10960 IPR036291 NAD(P)-binding domain superfamily LIS44_10960 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LIS44_10970 IPR029046 Lipoprotein localisation LolA/LolB/LppX LIS44_10970 IPR004565 Outer membrane lipoprotein LolB LIS44_10975 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_10975 IPR013750 GHMP kinase, C-terminal domain LIS44_10975 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase LIS44_10975 IPR006204 GHMP kinase N-terminal domain LIS44_10975 IPR036554 GHMP kinase, C-terminal domain superfamily LIS44_10975 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_11000 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain LIS44_11000 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site LIS44_11000 IPR029057 Phosphoribosyltransferase-like LIS44_11000 IPR005946 Ribose-phosphate pyrophosphokinase LIS44_11000 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type LIS44_11000 IPR000836 Phosphoribosyltransferase domain LIS44_11005 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal LIS44_11005 IPR029751 Ribosomal protein L25 LIS44_11005 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily LIS44_11005 IPR020055 Ribosomal protein L25, short-form LIS44_11010 IPR018171 Peptidyl-tRNA hydrolase, conserved site LIS44_11010 IPR001328 Peptidyl-tRNA hydrolase LIS44_11010 IPR036416 Peptidyl-tRNA hydrolase superfamily LIS44_11015 IPR003190 Aspartate decarboxylase LIS44_11015 IPR009010 Aspartate decarboxylase-like domain superfamily LIS44_11020 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LIS44_11020 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB LIS44_11030 IPR001763 Rhodanese-like domain LIS44_11030 IPR036873 Rhodanese-like domain superfamily LIS44_11030 IPR020936 Uncharacterised protein family UPF0176 LIS44_11030 IPR040503 UPF0176, acylphosphatase-like domain LIS44_11040 IPR032816 SNARE associated Golgi protein LIS44_11060 IPR013324 RNA polymerase sigma factor, region 3/4-like LIS44_11060 IPR014284 RNA polymerase sigma-70 like domain LIS44_11060 IPR007627 RNA polymerase sigma-70 region 2 LIS44_11060 IPR009042 RNA polymerase sigma-70 region 1.2 LIS44_11060 IPR000943 RNA polymerase sigma-70 LIS44_11060 IPR007631 RNA polymerase sigma factor 70, non-essential domain LIS44_11060 IPR007127 RNA polymerase sigma factor 70, region 1.1 LIS44_11060 IPR042189 Sigma-70 factor, region 1.1 superfamily LIS44_11060 IPR013325 RNA polymerase sigma factor, region 2 LIS44_11060 IPR007630 RNA polymerase sigma-70 region 4 LIS44_11060 IPR007624 RNA polymerase sigma-70 region 3 LIS44_11060 IPR028630 RNA polymerase sigma factor RpoD LIS44_11060 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_11060 IPR012760 RNA polymerase sigma factor RpoD, C-terminal LIS44_11070 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain LIS44_11070 IPR000544 Octanoyltransferase LIS44_11070 IPR020605 Octanoyltransferase, conserved site LIS44_11080 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA LIS44_11080 IPR018211 Alcohol dehydrogenase, iron-type, conserved site LIS44_11080 IPR039697 Iron-type alcohol dehydrogenase-like LIS44_11085 IPR002293 Amino acid/polyamine transporter I LIS44_11090 IPR029028 Alpha/beta knot methyltransferases LIS44_11090 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase LIS44_11090 IPR001537 tRNA/rRNA methyltransferase, SpoU type LIS44_11090 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIS44_11095 IPR014777 Tetrapyrrole methylase, subdomain 1 LIS44_11095 IPR035996 Tetrapyrrole methylase superfamily LIS44_11095 IPR006367 Sirohaem synthase, N-terminal LIS44_11095 IPR019478 Sirohaem synthase, dimerisation domain LIS44_11095 IPR028281 Siroheme synthase, central domain LIS44_11095 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site LIS44_11095 IPR037115 Sirohaem synthase, dimerisation domain superfamily LIS44_11095 IPR036291 NAD(P)-binding domain superfamily LIS44_11095 IPR006366 Uroporphyrin-III C-methyltransferase LIS44_11095 IPR014776 Tetrapyrrole methylase, subdomain 2 LIS44_11095 IPR012409 Sirohaem synthase LIS44_11095 IPR000878 Tetrapyrrole methylase LIS44_11100 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LIS44_11100 IPR006195 Aminoacyl-tRNA synthetase, class II LIS44_11100 IPR002317 Serine-tRNA ligase, type1 LIS44_11100 IPR015866 Serine-tRNA synthetase, type1, N-terminal LIS44_11100 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily LIS44_11100 IPR033729 Serine-tRNA ligase catalytic core domain LIS44_11100 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LIS44_11110 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria LIS44_11110 IPR029046 Lipoprotein localisation LolA/LolB/LppX LIS44_11110 IPR004564 Outer membrane lipoprotein carrier protein LolA-like LIS44_11115 IPR018261 Ribosomal protein L27, conserved site LIS44_11115 IPR001684 Ribosomal protein L27 LIS44_11120 IPR036164 L21-like superfamily LIS44_11120 IPR028909 Ribosomal protein L21-like LIS44_11120 IPR001787 Ribosomal protein L21 LIS44_11120 IPR018258 Ribosomal protein L21, conserved site LIS44_11125 IPR008949 Isoprenoid synthase domain superfamily LIS44_11125 IPR033749 Polyprenyl synthetase, conserved site LIS44_11125 IPR000092 Polyprenyl synthetase LIS44_11150 IPR003423 Outer membrane efflux protein LIS44_11150 IPR010131 RND efflux system, outer membrane lipoprotein, NodT LIS44_11155 IPR002765 Uncharacterised protein family UPF0145 LIS44_11155 IPR035439 UPF0145 domain superfamily LIS44_11160 IPR002765 Uncharacterised protein family UPF0145 LIS44_11160 IPR035439 UPF0145 domain superfamily LIS44_11165 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase LIS44_11165 IPR036291 NAD(P)-binding domain superfamily LIS44_11165 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_11165 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_11175 IPR002303 Valine-tRNA ligase LIS44_11175 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LIS44_11175 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm LIS44_11175 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LIS44_11175 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LIS44_11175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_11175 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIS44_11175 IPR033705 Valyl tRNA synthetase, anticodon-binding domain LIS44_11175 IPR002300 Aminoacyl-tRNA synthetase, class Ia LIS44_11175 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIS44_11175 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LIS44_11185 IPR007569 Protein of unknown function DUF559 LIS44_11185 IPR011335 Restriction endonuclease type II-like LIS44_11190 IPR001207 Transposase, mutator type LIS44_11200 IPR007353 Protein of unknown function DUF421 LIS44_11200 IPR023090 UPF0702, alpha/beta domain superfamily LIS44_11210 IPR035906 MetI-like superfamily LIS44_11210 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_11210 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ LIS44_11210 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LIS44_11215 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain LIS44_11215 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM LIS44_11215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_11215 IPR035906 MetI-like superfamily LIS44_11220 IPR003593 AAA+ ATPase domain LIS44_11220 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type LIS44_11220 IPR003439 ABC transporter-like LIS44_11220 IPR017871 ABC transporter, conserved site LIS44_11220 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_11225 IPR018047 Ammonium transporter, conserved site LIS44_11225 IPR001905 Ammonium transporter LIS44_11225 IPR024041 Ammonium transporter AmtB-like domain LIS44_11225 IPR029020 Ammonium/urea transporter LIS44_11230 IPR036412 HAD-like superfamily LIS44_11230 IPR006439 HAD hydrolase, subfamily IA LIS44_11230 IPR041492 Haloacid dehalogenase-like hydrolase LIS44_11230 IPR023214 HAD superfamily LIS44_11230 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIS44_11230 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic LIS44_11230 IPR037512 Phosphoglycolate phosphatase, prokaryotic LIS44_11240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_11240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_11240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_11240 IPR005467 Histidine kinase domain LIS44_11240 IPR013727 Two-component sensor kinase, N-terminal LIS44_11240 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_11240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_11245 IPR016032 Signal transduction response regulator, C-terminal effector LIS44_11245 IPR011006 CheY-like superfamily LIS44_11245 IPR001867 OmpR/PhoB-type DNA-binding domain LIS44_11245 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_11245 IPR039420 Transcriptional regulatory protein WalR-like LIS44_11245 IPR001789 Signal transduction response regulator, receiver domain LIS44_11250 IPR040423 Phosphoethanolamine transferase LIS44_11250 IPR012549 Phosphoethanolamine transferase, N-terminal LIS44_11250 IPR017850 Alkaline-phosphatase-like, core domain superfamily LIS44_11250 IPR000917 Sulfatase, N-terminal LIS44_11270 IPR001423 Lysophospholipase patatin, conserved site LIS44_11270 IPR002641 Patatin-like phospholipase domain LIS44_11270 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase LIS44_11280 IPR001107 Band 7 domain LIS44_11280 IPR036013 Band 7/SPFH domain superfamily LIS44_11280 IPR018080 Band 7/stomatin-like, conserved site LIS44_11280 IPR001972 Stomatin family LIS44_11285 IPR001734 Sodium/solute symporter LIS44_11285 IPR038377 Sodium/glucose symporter superfamily LIS44_11285 IPR011851 Sodium/proline symporter LIS44_11285 IPR018212 Sodium/solute symporter, conserved site LIS44_11290 IPR008949 Isoprenoid synthase domain superfamily LIS44_11290 IPR000092 Polyprenyl synthetase LIS44_11290 IPR033749 Polyprenyl synthetase, conserved site LIS44_11295 IPR012709 2-methyl-aconitate isomerase PrpF LIS44_11295 IPR007400 PrpF protein LIS44_11300 IPR004841 Amino acid permease/ SLC12A domain LIS44_11300 IPR004840 Amino acid permease, conserved site LIS44_11320 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein LIS44_11320 IPR036412 HAD-like superfamily LIS44_11320 IPR023214 HAD superfamily LIS44_11325 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase LIS44_11325 IPR011798 Adenosine 5'-phosphosulphate reductase LIS44_11325 IPR002500 Phosphoadenosine phosphosulphate reductase LIS44_11325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_11330 IPR004255 O-acyltransferase, WSD1, N-terminal LIS44_11330 IPR009721 O-acyltransferase WSD1, C-terminal LIS44_11330 IPR014292 Acyltransferase, WS/DGAT/MGAT LIS44_11340 IPR004659 Ribonuclease E/G LIS44_11340 IPR022967 RNA-binding domain, S1 LIS44_11340 IPR012340 Nucleic acid-binding, OB-fold LIS44_11340 IPR003029 S1 domain LIS44_11340 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G LIS44_11345 IPR029001 Inosine triphosphate pyrophosphatase-like LIS44_11345 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein LIS44_11360 IPR004753 Cell shape determining protein MreB LIS44_11365 IPR003837 Glu-tRNAGln amidotransferase C subunit LIS44_11365 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C LIS44_11370 IPR036928 Amidase signature (AS) superfamily LIS44_11370 IPR000120 Amidase LIS44_11370 IPR020556 Amidase, conserved site LIS44_11370 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit LIS44_11370 IPR023631 Amidase signature domain LIS44_11375 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit LIS44_11375 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain LIS44_11375 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 LIS44_11375 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 LIS44_11375 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like LIS44_11375 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic LIS44_11375 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E LIS44_11375 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site LIS44_11375 IPR018027 Asn/Gln amidotransferase LIS44_11415 IPR036640 ABC transporter type 1, transmembrane domain superfamily LIS44_11415 IPR009248 SbmA/BacA-like LIS44_11450 IPR013515 Phytochrome, central region LIS44_11450 IPR016132 Phytochrome chromophore attachment domain LIS44_11450 IPR029787 Nucleotide cyclase LIS44_11450 IPR003018 GAF domain LIS44_11450 IPR000160 GGDEF domain LIS44_11450 IPR001633 EAL domain LIS44_11450 IPR035919 EAL domain superfamily LIS44_11450 IPR001294 Phytochrome LIS44_11450 IPR029016 GAF-like domain superfamily LIS44_11460 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain LIS44_11460 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIS44_11460 IPR029052 Metallo-dependent phosphatase-like LIS44_11460 IPR004593 Nuclease SbcCD subunit D LIS44_11460 IPR026843 Nuclease SbcCD subunit D, C-terminal domain LIS44_11465 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_11475 IPR011078 Pyridoxal phosphate homeostasis protein LIS44_11475 IPR029066 PLP-binding barrel LIS44_11475 IPR001608 Alanine racemase, N-terminal LIS44_11480 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_11480 IPR003593 AAA+ ATPase domain LIS44_11480 IPR001482 Type II/IV secretion system protein LIS44_11480 IPR006321 Pilus retraction protein PilT LIS44_11485 IPR006321 Pilus retraction protein PilT LIS44_11485 IPR001482 Type II/IV secretion system protein LIS44_11485 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_11490 IPR036390 Winged helix DNA-binding domain superfamily LIS44_11490 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_11490 IPR002481 Ferric-uptake regulator LIS44_11495 IPR037873 BamE-like LIS44_11495 IPR007450 Lipoprotein SmpA/OmlA LIS44_11495 IPR026592 Outer membrane protein assembly factor BamE LIS44_11500 IPR005346 RnfH protein LIS44_11500 IPR037021 RnfH superfamily LIS44_11500 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LIS44_11510 IPR023504 Bacteriohemerythrin-like protein LIS44_11510 IPR012312 Haemerythrin-like LIS44_11510 IPR035938 Hemerythrin-like superfamily LIS44_11510 IPR012827 Haemerythrin, metal-binding domain LIS44_11510 IPR016131 Haemerythrin, iron-binding site LIS44_11515 IPR017932 Glutamine amidotransferase type 2 domain LIS44_11515 IPR029055 Nucleophile aminohydrolases, N-terminal LIS44_11515 IPR026869 Putative glutamine amidotransferase type 2 LIS44_11520 IPR041727 N-Acetyl-L-glutamate kinase, cyclic LIS44_11520 IPR036393 Acetylglutamate kinase-like superfamily LIS44_11520 IPR004662 Acetylglutamate kinase family LIS44_11520 IPR037528 Acetylglutamate kinase ArgB LIS44_11520 IPR001048 Aspartate/glutamate/uridylate kinase LIS44_11525 IPR016066 Alpha-D-phosphohexomutase, conserved site LIS44_11525 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily LIS44_11525 IPR005843 Alpha-D-phosphohexomutase, C-terminal LIS44_11525 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III LIS44_11525 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III LIS44_11525 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I LIS44_11525 IPR005841 Alpha-D-phosphohexomutase superfamily LIS44_11525 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II LIS44_11530 IPR033704 dUTPase, trimeric LIS44_11530 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase LIS44_11530 IPR029054 dUTPase-like LIS44_11530 IPR036157 dUTPase-like superfamily LIS44_11540 IPR039567 Glycine zipper domain LIS44_11540 IPR006690 Outer membrane protein, OmpA-like, conserved site LIS44_11540 IPR006664 Outer membrane protein, bacterial LIS44_11540 IPR006665 OmpA-like domain LIS44_11540 IPR036737 OmpA-like domain superfamily LIS44_11545 IPR002123 Phospholipid/glycerol acyltransferase LIS44_11555 IPR013033 Septum formation inhibitor MinC LIS44_11555 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal LIS44_11555 IPR005526 Septum formation inhibitor MinC, C-terminal LIS44_11555 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily LIS44_11560 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_11560 IPR010223 ATP binding protein MinD, bacterial-type LIS44_11560 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LIS44_11560 IPR025501 ATP binding protein MinD LIS44_11580 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_11580 IPR036390 Winged helix DNA-binding domain superfamily LIS44_11580 IPR002543 FtsK domain LIS44_11580 IPR018541 FtsK gamma domain LIS44_11580 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_11580 IPR025199 DNA translocase FtsK, 4TM region LIS44_11580 IPR041027 FtsK alpha domain LIS44_11585 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_11585 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site LIS44_11585 IPR023753 FAD/NAD(P)-binding domain LIS44_11585 IPR005982 Thioredoxin reductase LIS44_11590 IPR016181 Acyl-CoA N-acyltransferase LIS44_11590 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase LIS44_11590 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal LIS44_11595 IPR016181 Acyl-CoA N-acyltransferase LIS44_11595 IPR030700 N-end rule aminoacyl transferase LIS44_11595 IPR017138 Aspartate/glutamate leucyltransferase LIS44_11595 IPR007472 N-end rule aminoacyl transferase, C-terminal LIS44_11595 IPR007471 N-end aminoacyl transferase, N-terminal LIS44_11600 IPR000182 GNAT domain LIS44_11600 IPR016181 Acyl-CoA N-acyltransferase LIS44_11600 IPR006464 N-acetyltransferase RimI/Ard1 LIS44_11615 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle LIS44_11615 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LIS44_11615 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain LIS44_11615 IPR009000 Translation protein, beta-barrel domain superfamily LIS44_11615 IPR000795 Transcription factor, GTP-binding domain LIS44_11615 IPR005225 Small GTP-binding protein domain LIS44_11615 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_11615 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LIS44_11615 IPR031157 Tr-type G domain, conserved site LIS44_11615 IPR004161 Translation elongation factor EFTu-like, domain 2 LIS44_11615 IPR033720 Elongation factor Tu, domain 2 LIS44_11625 IPR000235 Ribosomal protein S5/S7 LIS44_11625 IPR036823 Ribosomal protein S7 domain superfamily LIS44_11625 IPR020606 Ribosomal protein S7, conserved site LIS44_11625 IPR023798 Ribosomal protein S7 domain LIS44_11625 IPR005717 Ribosomal protein S7, bacterial/organellar-type LIS44_11630 IPR006032 Ribosomal protein S12/S23 LIS44_11630 IPR012340 Nucleic acid-binding, OB-fold LIS44_11630 IPR005679 Ribosomal protein S12, bacterial-type LIS44_11640 IPR000794 Beta-ketoacyl synthase LIS44_11640 IPR018201 Beta-ketoacyl synthase, active site LIS44_11640 IPR014031 Beta-ketoacyl synthase, C-terminal LIS44_11640 IPR014030 Beta-ketoacyl synthase, N-terminal LIS44_11640 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LIS44_11640 IPR016039 Thiolase-like LIS44_11645 IPR005265 Protoporphyrinogen oxidase HemJ-like LIS44_11650 IPR004841 Amino acid permease/ SLC12A domain LIS44_11650 IPR004840 Amino acid permease, conserved site LIS44_11655 IPR019897 RidA, conserved site LIS44_11655 IPR035959 RutC-like superfamily LIS44_11655 IPR006175 YjgF/YER057c/UK114 family LIS44_11655 IPR035709 RutC family, YoaB-like LIS44_11660 IPR029066 PLP-binding barrel LIS44_11660 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site LIS44_11660 IPR011079 Alanine racemase, C-terminal LIS44_11660 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal LIS44_11660 IPR000821 Alanine racemase LIS44_11660 IPR001608 Alanine racemase, N-terminal LIS44_11665 IPR023080 D-amino acid dehydrogenase DadA LIS44_11665 IPR006076 FAD dependent oxidoreductase LIS44_11665 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_11670 IPR036390 Winged helix DNA-binding domain superfamily LIS44_11670 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_11670 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LIS44_11670 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LIS44_11670 IPR011008 Dimeric alpha-beta barrel LIS44_11670 IPR000485 AsnC-type HTH domain LIS44_11670 IPR019888 Transcription regulator AsnC-type LIS44_11670 IPR011991 ArsR-like helix-turn-helix domain LIS44_11675 IPR036412 HAD-like superfamily LIS44_11675 IPR041492 Haloacid dehalogenase-like hydrolase LIS44_11675 IPR023214 HAD superfamily LIS44_11675 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIS44_11680 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase LIS44_11680 IPR022998 Thiamine phosphate synthase/TenI LIS44_11680 IPR036206 Thiamin phosphate synthase superfamily LIS44_11680 IPR004305 Thiaminase-2/PQQC LIS44_11680 IPR029056 Ribokinase-like LIS44_11680 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase LIS44_11680 IPR016084 Haem oxygenase-like, multi-helical LIS44_11680 IPR013785 Aldolase-type TIM barrel LIS44_11680 IPR034291 Thiamine phosphate synthase LIS44_11685 IPR036913 YegP-like superfamily LIS44_11685 IPR010879 Domain of unknown function DUF1508 LIS44_11695 IPR004624 PhnA protein LIS44_11695 IPR013988 PhnA protein, C-terminal LIS44_11695 IPR013987 PhnA protein, N-terminal LIS44_11700 IPR007438 Protein of unknown function DUF488 LIS44_11710 IPR011614 Catalase core domain LIS44_11710 IPR020835 Catalase superfamily LIS44_11725 IPR006145 Pseudouridine synthase, RsuA/RluA LIS44_11725 IPR006225 Pseudouridine synthase, RluC/RluD LIS44_11725 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LIS44_11725 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIS44_11780 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent LIS44_11780 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain LIS44_11780 IPR036008 Aconitase, iron-sulfur domain LIS44_11780 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LIS44_11780 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain LIS44_11780 IPR006249 Aconitase/Iron-responsive element-binding protein 2 LIS44_11780 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 LIS44_11785 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal LIS44_11785 IPR023758 tRNA-modifying protein YgfZ LIS44_11785 IPR017703 YgfZ/GcvT conserved site LIS44_11805 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal LIS44_11805 IPR013785 Aldolase-type TIM barrel LIS44_11805 IPR023663 NADPH dehydrogenase LIS44_11815 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding LIS44_11815 IPR020629 Formamidopyrimidine-DNA glycosylase LIS44_11815 IPR035937 MutM-like, N-terminal LIS44_11815 IPR010979 Ribosomal protein S13-like, H2TH LIS44_11815 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type LIS44_11815 IPR010663 Zinc finger, FPG/IleRS-type LIS44_11815 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain LIS44_11820 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type LIS44_11820 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LIS44_11825 IPR036019 Gated mechanosensitive channel LIS44_11825 IPR019823 Large-conductance mechanosensitive channel, conserved site LIS44_11825 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L LIS44_11825 IPR001185 Large-conductance mechanosensitive channel LIS44_11830 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_11830 IPR006298 GTP-binding protein TypA LIS44_11830 IPR042116 GTP-binding protein TypA/BipA, C-terminal LIS44_11830 IPR035647 EF-G domain III/V-like LIS44_11830 IPR035651 BipA, domain V LIS44_11830 IPR009000 Translation protein, beta-barrel domain superfamily LIS44_11830 IPR000795 Transcription factor, GTP-binding domain LIS44_11830 IPR005225 Small GTP-binding protein domain LIS44_11830 IPR031157 Tr-type G domain, conserved site LIS44_11830 IPR004161 Translation elongation factor EFTu-like, domain 2 LIS44_11830 IPR000640 Elongation factor EFG, domain V-like LIS44_11835 IPR006043 Xanthine/uracil/vitamin C permease LIS44_11835 IPR006042 Xanthine/uracil permease LIS44_11840 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LIS44_11840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_11840 IPR023543 rRNA small subunit methyltransferase C LIS44_11840 IPR007848 Methyltransferase small domain LIS44_11840 IPR013675 Methyltransferase small, N-terminal LIS44_11845 IPR004841 Amino acid permease/ SLC12A domain LIS44_11845 IPR004840 Amino acid permease, conserved site LIS44_11850 IPR000639 Epoxide hydrolase-like LIS44_11850 IPR000073 Alpha/beta hydrolase fold-1 LIS44_11850 IPR029058 Alpha/Beta hydrolase fold LIS44_11860 IPR001082 Fimbrial protein pilin LIS44_11860 IPR012902 Prokaryotic N-terminal methylation site LIS44_11865 IPR016039 Thiolase-like LIS44_11865 IPR020615 Thiolase, acyl-enzyme intermediate active site LIS44_11865 IPR020610 Thiolase, active site LIS44_11865 IPR020617 Thiolase, C-terminal LIS44_11865 IPR020613 Thiolase, conserved site LIS44_11865 IPR020616 Thiolase, N-terminal LIS44_11865 IPR002155 Thiolase LIS44_11880 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain LIS44_11880 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site LIS44_11880 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain LIS44_11880 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily LIS44_11885 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LIS44_11885 IPR002372 Pyrrolo-quinoline quinone repeat LIS44_11885 IPR017511 PQQ-dependent membrane bound dehydrogenase LIS44_11885 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LIS44_11885 IPR001479 Quinoprotein dehydrogenase, conserved site LIS44_11890 IPR007049 Carbohydrate-selective porin OprB LIS44_11890 IPR038673 Carbohydrate-selective porin OprB superfamily LIS44_11895 IPR003673 CoA-transferase family III LIS44_11895 IPR023606 CoA-transferase family III domain superfamily LIS44_11900 IPR020449 Transcription regulator HTH, AraC- type LIS44_11900 IPR018062 HTH domain AraC-type, conserved site LIS44_11900 IPR018060 DNA binding HTH domain, AraC-type LIS44_11900 IPR037923 Transcription regulator HTH-like LIS44_11900 IPR009057 Homeobox-like domain superfamily LIS44_11900 IPR003313 AraC-type arabinose-binding/dimerisation domain LIS44_11905 IPR020610 Thiolase, active site LIS44_11905 IPR020616 Thiolase, N-terminal LIS44_11905 IPR020615 Thiolase, acyl-enzyme intermediate active site LIS44_11905 IPR016039 Thiolase-like LIS44_11905 IPR002155 Thiolase LIS44_11905 IPR020617 Thiolase, C-terminal LIS44_11905 IPR020613 Thiolase, conserved site LIS44_11910 IPR036291 NAD(P)-binding domain superfamily LIS44_11910 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding LIS44_11910 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site LIS44_11910 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal LIS44_11910 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_11910 IPR029045 ClpP/crotonase-like domain superfamily LIS44_11910 IPR001753 Enoyl-CoA hydratase/isomerase LIS44_11910 IPR012802 Fatty oxidation complex, alpha subunit FadJ LIS44_11930 IPR004254 AdipoR/Haemolysin-III-related LIS44_11930 IPR005744 Hly-III LIS44_11935 IPR020846 Major facilitator superfamily domain LIS44_11935 IPR011701 Major facilitator superfamily LIS44_11935 IPR005829 Sugar transporter, conserved site LIS44_11935 IPR004736 MFS transporter, metabolite:H symporter LIS44_11935 IPR036259 MFS transporter superfamily LIS44_11935 IPR005828 Major facilitator, sugar transporter-like LIS44_11945 IPR029052 Metallo-dependent phosphatase-like LIS44_11945 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIS44_11950 IPR001736 Phospholipase D/Transphosphatidylase LIS44_11950 IPR030871 Cardiolipin synthase C LIS44_11950 IPR025202 Phospholipase D-like domain LIS44_11960 IPR042108 GTPase HflX, N-terminal domain superfamily LIS44_11960 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_11960 IPR035647 EF-G domain III/V-like LIS44_11960 IPR030394 HflX-type guanine nucleotide-binding (G) domain LIS44_11960 IPR032305 GTP-binding protein, middle domain LIS44_11960 IPR006073 GTP binding domain LIS44_11960 IPR025121 GTPase HflX, N-terminal LIS44_11960 IPR016496 GTPase HflX LIS44_11995 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) LIS44_11995 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIS44_11995 IPR029052 Metallo-dependent phosphatase-like LIS44_12000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_12000 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LIS44_12000 IPR011530 Ribosomal RNA adenine dimethylase LIS44_12000 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site LIS44_12000 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal LIS44_12000 IPR023165 rRNA adenine dimethylase-like LIS44_12005 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase LIS44_12005 IPR005255 PdxA family LIS44_12010 IPR005822 Ribosomal protein L13 LIS44_12010 IPR005823 Ribosomal protein L13, bacterial-type LIS44_12010 IPR036899 Ribosomal protein L13 superfamily LIS44_12015 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_12015 IPR000754 Ribosomal protein S9 LIS44_12015 IPR023035 Ribosomal protein S9, bacterial/plastid LIS44_12015 IPR020574 Ribosomal protein S9, conserved site LIS44_12015 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_12020 IPR036249 Thioredoxin-like superfamily LIS44_12020 IPR034341 Stringent starvation protein A, N-terminal LIS44_12020 IPR004045 Glutathione S-transferase, N-terminal LIS44_12020 IPR040079 Glutathione Transferase family LIS44_12020 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LIS44_12020 IPR004046 Glutathione S-transferase, C-terminal LIS44_12020 IPR010987 Glutathione S-transferase, C-terminal-like LIS44_12025 IPR036760 SspB-like superfamily LIS44_12025 IPR007481 Stringent starvation protein B LIS44_12060 IPR007428 MlaA lipoprotein LIS44_12075 IPR003010 Carbon-nitrogen hydrolase LIS44_12075 IPR036526 Carbon-nitrogen hydrolase superfamily LIS44_12075 IPR001110 Uncharacterised protein family UPF0012, conserved site LIS44_12080 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12080 IPR001482 Type II/IV secretion system protein LIS44_12080 IPR037257 General secretory system II, protein E, N-terminal superfamily LIS44_12080 IPR013369 Type II secretion system GspE LIS44_12080 IPR042181 Type II secretion system, protein E, N-terminal LIS44_12100 IPR036397 Ribonuclease H superfamily LIS44_12100 IPR012337 Ribonuclease H-like superfamily LIS44_12100 IPR029060 PIN-like domain superfamily LIS44_12100 IPR008918 Helix-hairpin-helix motif, class 2 LIS44_12100 IPR002298 DNA polymerase A LIS44_12100 IPR036279 5'-3' exonuclease, C-terminal domain superfamily LIS44_12100 IPR020045 DNA polymerase I-like, H3TH domain LIS44_12100 IPR001098 DNA-directed DNA polymerase, family A, palm domain LIS44_12100 IPR019760 DNA-directed DNA polymerase, family A, conserved site LIS44_12100 IPR002421 5'-3' exonuclease, N-terminal LIS44_12100 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal LIS44_12100 IPR018320 DNA polymerase 1 LIS44_12100 IPR002562 3'-5' exonuclease domain LIS44_12110 IPR003425 CCB3/YggT LIS44_12115 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain LIS44_12115 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LIS44_12115 IPR000304 Pyrroline-5-carboxylate reductase LIS44_12115 IPR036291 NAD(P)-binding domain superfamily LIS44_12115 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_12120 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal LIS44_12120 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_12120 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LIS44_12120 IPR012094 tRNA(Ile)-lysidine synthase LIS44_12120 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal LIS44_12120 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain LIS44_12125 IPR001095 Acetyl-CoA carboxylase, alpha subunit LIS44_12125 IPR029045 ClpP/crotonase-like domain superfamily LIS44_12125 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal LIS44_12130 IPR003695 Ppx/GppA phosphatase LIS44_12130 IPR022371 Exopolyphosphatase LIS44_12130 IPR030673 Pyrophosphatase, GppA/Ppx-type LIS44_12135 IPR005746 Thioredoxin LIS44_12135 IPR036249 Thioredoxin-like superfamily LIS44_12135 IPR017937 Thioredoxin, conserved site LIS44_12135 IPR013766 Thioredoxin domain LIS44_12140 IPR004665 Transcription termination factor Rho LIS44_12140 IPR011113 Rho termination factor, RNA-binding domain LIS44_12140 IPR041703 Transcription termination factor Rho, ATP binding domain LIS44_12140 IPR036269 Rho termination factor, N-terminal domain superfamily LIS44_12140 IPR012340 Nucleic acid-binding, OB-fold LIS44_12140 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12140 IPR003593 AAA+ ATPase domain LIS44_12140 IPR011112 Rho termination factor, N-terminal LIS44_12140 IPR011129 Cold shock domain LIS44_12140 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LIS44_12150 IPR000119 Histone-like DNA-binding protein LIS44_12150 IPR020816 Histone-like DNA-binding protein, conserved site LIS44_12150 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily LIS44_12150 IPR005684 Integration host factor, alpha subunit LIS44_12155 IPR005147 tRNA synthetase, B5-domain LIS44_12155 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain LIS44_12155 IPR002547 tRNA-binding domain LIS44_12155 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain LIS44_12155 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LIS44_12155 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily LIS44_12155 IPR005121 Ferrodoxin-fold anticodon-binding domain LIS44_12155 IPR009061 Putative DNA-binding domain superfamily LIS44_12155 IPR005146 B3/B4 tRNA-binding domain LIS44_12155 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit LIS44_12155 IPR012340 Nucleic acid-binding, OB-fold LIS44_12160 IPR006195 Aminoacyl-tRNA synthetase, class II LIS44_12160 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit LIS44_12160 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal LIS44_12160 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial LIS44_12160 IPR002319 Phenylalanyl-tRNA synthetase LIS44_12160 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm LIS44_12170 IPR000594 THIF-type NAD/FAD binding fold LIS44_12170 IPR035985 Ubiquitin-activating enzyme LIS44_12175 IPR036397 Ribonuclease H superfamily LIS44_12175 IPR013520 Exonuclease, RNase T/DNA polymerase III LIS44_12175 IPR012337 Ribonuclease H-like superfamily LIS44_12175 IPR022894 Oligoribonuclease LIS44_12180 IPR010914 RsgA GTPase domain LIS44_12180 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain LIS44_12180 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12180 IPR004881 Ribosome biogenesis GTPase RsgA LIS44_12190 IPR011767 Glutaredoxin active site LIS44_12190 IPR002109 Glutaredoxin LIS44_12190 IPR014025 Glutaredoxin subgroup LIS44_12190 IPR011900 Glutaredoxin, GrxC LIS44_12190 IPR036249 Thioredoxin-like superfamily LIS44_12195 IPR003708 Bacterial protein export chaperone SecB LIS44_12195 IPR035958 SecB-like superfamily LIS44_12200 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_12200 IPR036291 NAD(P)-binding domain superfamily LIS44_12200 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) LIS44_12210 IPR018228 Deoxyribonuclease, TatD-related, conserved site LIS44_12210 IPR032466 Metal-dependent hydrolase LIS44_12210 IPR001130 TatD family LIS44_12225 IPR009000 Translation protein, beta-barrel domain superfamily LIS44_12225 IPR000795 Transcription factor, GTP-binding domain LIS44_12225 IPR005225 Small GTP-binding protein domain LIS44_12225 IPR041732 Peptide chain release factor 3, GTP-binding domain LIS44_12225 IPR032090 Peptide chain release factor 3, C-terminal LIS44_12225 IPR004548 Peptide chain release factor 3 LIS44_12225 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily LIS44_12225 IPR035647 EF-G domain III/V-like LIS44_12225 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12225 IPR004161 Translation elongation factor EFTu-like, domain 2 LIS44_12225 IPR031157 Tr-type G domain, conserved site LIS44_12230 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel LIS44_12230 IPR036737 OmpA-like domain superfamily LIS44_12230 IPR000498 Outer membrane protein OmpA-like, transmembrane domain LIS44_12230 IPR006665 OmpA-like domain LIS44_12230 IPR002368 Outer membrane protein, OmpA LIS44_12230 IPR006664 Outer membrane protein, bacterial LIS44_12230 IPR006690 Outer membrane protein, OmpA-like, conserved site LIS44_12235 IPR030930 Adhesin of bacterial autotransporter system LIS44_12235 IPR036709 Autotransporter beta-domain superfamily LIS44_12235 IPR024973 ESPR domain LIS44_12235 IPR006315 Outer membrane autotransporter barrel LIS44_12235 IPR012332 P22 tailspike-like, C-terminal domain superfamily LIS44_12235 IPR011050 Pectin lyase fold/virulence factor LIS44_12235 IPR004899 Pertactin, central region LIS44_12235 IPR003991 Pertactin virulence factor family LIS44_12235 IPR005546 Autotransporter beta-domain LIS44_12240 IPR005330 MHYT domain LIS44_12240 IPR001633 EAL domain LIS44_12240 IPR035919 EAL domain superfamily LIS44_12240 IPR029787 Nucleotide cyclase LIS44_12240 IPR000160 GGDEF domain LIS44_12245 IPR029045 ClpP/crotonase-like domain superfamily LIS44_12245 IPR001478 PDZ domain LIS44_12245 IPR036034 PDZ superfamily LIS44_12245 IPR004447 C-terminal-processing peptidase S41A LIS44_12245 IPR005151 Tail specific protease LIS44_12245 IPR020992 Tail specific protease, C-terminal LIS44_12245 IPR040573 Tail specific protease, N-terminal domain LIS44_12250 IPR022956 Beta-hexosaminidase, bacterial LIS44_12250 IPR019800 Glycoside hydrolase, family 3, active site LIS44_12250 IPR001764 Glycoside hydrolase, family 3, N-terminal LIS44_12250 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily LIS44_12250 IPR017853 Glycoside hydrolase superfamily LIS44_12265 IPR016163 Aldehyde dehydrogenase, C-terminal LIS44_12265 IPR015590 Aldehyde dehydrogenase domain LIS44_12265 IPR016162 Aldehyde dehydrogenase, N-terminal LIS44_12265 IPR012134 Glutamate-5-semialdehyde dehydrogenase LIS44_12265 IPR016161 Aldehyde/histidinol dehydrogenase LIS44_12265 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site LIS44_12265 IPR000965 GPR domain LIS44_12275 IPR004372 Acetate/propionate kinase LIS44_12275 IPR000890 Aliphatic acid kinase, short-chain LIS44_12275 IPR023865 Aliphatic acid kinase, short-chain, conserved site LIS44_12280 IPR010766 DRTGG LIS44_12280 IPR016475 Phosphate acetyltransferase, bacteria LIS44_12280 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12280 IPR004614 Phosphate acetyltransferase LIS44_12280 IPR042113 Phosphate acetyltransferase, domain 1 LIS44_12280 IPR042112 Phosphate acetyltransferase, domain 2 LIS44_12280 IPR002505 Phosphate acetyl/butaryl transferase LIS44_12280 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily LIS44_12285 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal LIS44_12285 IPR023506 Trans-aconitate 2-methyltransferase LIS44_12285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_12285 IPR041698 Methyltransferase domain 25 LIS44_12290 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain LIS44_12290 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain LIS44_12290 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily LIS44_12290 IPR011167 Iron-dependent fumarate hydratase LIS44_12290 IPR020557 Fumarate lyase, conserved site LIS44_12300 IPR003593 AAA+ ATPase domain LIS44_12300 IPR003959 ATPase, AAA-type, core LIS44_12300 IPR019489 Clp ATPase, C-terminal LIS44_12300 IPR004487 Clp protease, ATP-binding subunit ClpX LIS44_12300 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12300 IPR010603 Zinc finger, ClpX C4-type LIS44_12300 IPR038366 Zinc finger, ClpX C4-type superfamily LIS44_12305 IPR018215 ClpP, Ser active site LIS44_12305 IPR033135 ClpP, histidine active site LIS44_12305 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LIS44_12305 IPR029045 ClpP/crotonase-like domain superfamily LIS44_12305 IPR001907 ATP-dependent Clp protease proteolytic subunit LIS44_12310 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LIS44_12310 IPR005215 Trigger factor LIS44_12310 IPR008880 Trigger factor, C-terminal LIS44_12310 IPR037041 Trigger factor, C-terminal domain superfamily LIS44_12310 IPR008881 Trigger factor, ribosome-binding, bacterial LIS44_12310 IPR036611 Trigger factor ribosome-binding domain superfamily LIS44_12310 IPR027304 Trigger factor/SurA domain superfamily LIS44_12315 IPR030148 Catecholate siderophore receptor Fiu LIS44_12315 IPR012910 TonB-dependent receptor, plug domain LIS44_12315 IPR037066 TonB-dependent receptor, plug domain superfamily LIS44_12315 IPR039423 TonB-dependent receptor-like LIS44_12315 IPR000531 TonB-dependent receptor-like, beta-barrel LIS44_12315 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LIS44_12315 IPR010105 TonB-dependent siderophore receptor LIS44_12320 IPR005123 Oxoglutarate/iron-dependent dioxygenase LIS44_12320 IPR041097 PKHD-type hydroxylase C-terminal domain LIS44_12320 IPR023550 PKHD-type hydroxylase LIS44_12320 IPR006620 Prolyl 4-hydroxylase, alpha subunit LIS44_12325 IPR000531 TonB-dependent receptor-like, beta-barrel LIS44_12325 IPR030148 Catecholate siderophore receptor Fiu LIS44_12325 IPR012910 TonB-dependent receptor, plug domain LIS44_12325 IPR037066 TonB-dependent receptor, plug domain superfamily LIS44_12325 IPR039423 TonB-dependent receptor-like LIS44_12325 IPR010916 TonB box, conserved site LIS44_12325 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LIS44_12325 IPR010105 TonB-dependent siderophore receptor LIS44_12330 IPR006620 Prolyl 4-hydroxylase, alpha subunit LIS44_12330 IPR005123 Oxoglutarate/iron-dependent dioxygenase LIS44_12330 IPR041097 PKHD-type hydroxylase C-terminal domain LIS44_12330 IPR023550 PKHD-type hydroxylase LIS44_12335 IPR013785 Aldolase-type TIM barrel LIS44_12335 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent LIS44_12335 IPR000262 FMN-dependent dehydrogenase LIS44_12335 IPR037396 FMN hydroxy acid dehydrogenase domain LIS44_12335 IPR023989 Heme/flavin dehydrogenase, Rv0694 LIS44_12340 IPR039371 LeuA, N-terminal catalytic TIM barrel domain LIS44_12340 IPR000891 Pyruvate carboxyltransferase LIS44_12340 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily LIS44_12340 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain LIS44_12340 IPR013785 Aldolase-type TIM barrel LIS44_12340 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site LIS44_12340 IPR005668 2-isopropylmalate synthase LIS44_12345 IPR029058 Alpha/Beta hydrolase fold LIS44_12345 IPR000073 Alpha/beta hydrolase fold-1 LIS44_12345 IPR008220 Homoserine/serine acetyltransferase MetX-like LIS44_12350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_12350 IPR010743 Methionine biosynthesis MetW LIS44_12350 IPR000073 Alpha/beta hydrolase fold-1 LIS44_12350 IPR029058 Alpha/Beta hydrolase fold LIS44_12350 IPR008220 Homoserine/serine acetyltransferase MetX-like LIS44_12360 IPR020922 dITP/XTP pyrophosphatase LIS44_12360 IPR002637 Ham1-like protein LIS44_12360 IPR029001 Inosine triphosphate pyrophosphatase-like LIS44_12370 IPR003369 Sec-independent protein translocase protein TatA/B/E LIS44_12370 IPR006312 Sec-independent protein translocase protein TatA/E LIS44_12375 IPR003369 Sec-independent protein translocase protein TatA/B/E LIS44_12375 IPR018448 Twin-arginine translocation protein TatB LIS44_12380 IPR019820 Sec-independent periplasmic protein translocase, conserved site LIS44_12380 IPR002033 Sec-independent periplasmic protein translocase TatC LIS44_12395 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt LIS44_12410 IPR005813 Ribosomal protein L20 LIS44_12410 IPR035566 Ribosomal protein L20, C-terminal LIS44_12415 IPR021137 Ribosomal protein L35 LIS44_12415 IPR018265 Ribosomal protein L35, conserved site LIS44_12415 IPR001706 Ribosomal protein L35, non-mitochondrial LIS44_12415 IPR037229 Ribosomal protein L35 superfamily LIS44_12420 IPR011701 Major facilitator superfamily LIS44_12420 IPR004751 Drug antiporter protein LIS44_12420 IPR020846 Major facilitator superfamily domain LIS44_12420 IPR036259 MFS transporter superfamily LIS44_12430 IPR032816 SNARE associated Golgi protein LIS44_12440 IPR010987 Glutathione S-transferase, C-terminal-like LIS44_12440 IPR036282 Glutathione S-transferase, C-terminal domain superfamily LIS44_12440 IPR004045 Glutathione S-transferase, N-terminal LIS44_12440 IPR004046 Glutathione S-transferase, C-terminal LIS44_12440 IPR036249 Thioredoxin-like superfamily LIS44_12445 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain LIS44_12445 IPR002068 Alpha crystallin/Hsp20 domain LIS44_12445 IPR008978 HSP20-like chaperone LIS44_12450 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily LIS44_12450 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily LIS44_12450 IPR001288 Translation initiation factor 3 LIS44_12450 IPR019815 Translation initiation factor 3, C-terminal LIS44_12450 IPR019814 Translation initiation factor 3, N-terminal LIS44_12455 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LIS44_12455 IPR033728 Threonine-tRNA ligase catalytic core domain LIS44_12455 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LIS44_12455 IPR002320 Threonine-tRNA ligase, class IIa LIS44_12455 IPR012676 TGS-like LIS44_12455 IPR012675 Beta-grasp domain superfamily LIS44_12455 IPR036621 Anticodon-binding domain superfamily LIS44_12455 IPR004154 Anticodon-binding LIS44_12455 IPR006195 Aminoacyl-tRNA synthetase, class II LIS44_12455 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LIS44_12455 IPR004095 TGS LIS44_12460 IPR000873 AMP-dependent synthetase/ligase LIS44_12460 IPR025110 AMP-binding enzyme, C-terminal domain LIS44_12460 IPR020845 AMP-binding, conserved site LIS44_12460 IPR042099 AMP-dependent synthetase-like superfamily LIS44_12465 IPR023153 PSPTO4464-like domain superfamily LIS44_12465 IPR006839 Ribosome-associated, YjgA LIS44_12470 IPR000032 Phosphocarrier protein HPr-like LIS44_12470 IPR035895 HPr-like superfamily LIS44_12470 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LIS44_12470 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LIS44_12475 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12475 IPR005337 RapZ-like family LIS44_12480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_12480 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain LIS44_12480 IPR003721 Pantoate-beta-alanine ligase LIS44_12480 IPR004821 Cytidyltransferase-like domain LIS44_12485 IPR003700 Ketopantoate hydroxymethyltransferase LIS44_12485 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIS44_12485 IPR040442 Pyruvate kinase-like domain superfamily LIS44_12490 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK LIS44_12490 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily LIS44_12495 IPR025866 Polymerase A arginine-rich C-terminal domain LIS44_12495 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LIS44_12495 IPR002646 Poly A polymerase, head domain LIS44_12495 IPR010206 Poly(A) polymerase I LIS44_12500 IPR010994 RuvA domain 2-like LIS44_12500 IPR004509 Competence protein ComEA, helix-hairpin-helix domain LIS44_12505 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LIS44_12505 IPR011551 NTP pyrophosphohydrolase MazG LIS44_12520 IPR031166 EngA-type guanine nucleotide-binding (G) domain LIS44_12520 IPR016484 GTP-binding protein EngA LIS44_12520 IPR006073 GTP binding domain LIS44_12520 IPR032859 GTPase Der, C-terminal KH-domain-like LIS44_12520 IPR015946 K homology domain-like, alpha/beta LIS44_12520 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12520 IPR005225 Small GTP-binding protein domain LIS44_12525 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LIS44_12525 IPR015943 WD40/YVTN repeat-like-containing domain superfamily LIS44_12525 IPR002372 Pyrrolo-quinoline quinone repeat LIS44_12525 IPR017687 Outer membrane protein assembly factor BamB LIS44_12525 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LIS44_12535 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit LIS44_12535 IPR006195 Aminoacyl-tRNA synthetase, class II LIS44_12535 IPR004154 Anticodon-binding LIS44_12535 IPR036621 Anticodon-binding domain superfamily LIS44_12535 IPR015807 Histidine-tRNA ligase LIS44_12535 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain LIS44_12540 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type LIS44_12540 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial LIS44_12540 IPR011005 Dihydropteroate synthase-like LIS44_12545 IPR010982 Lambda repressor-like, DNA-binding domain superfamily LIS44_12545 IPR001387 Cro/C1-type helix-turn-helix domain LIS44_12545 IPR025194 Domain of unknown function DUF4115 LIS44_12550 IPR019734 Tetratricopeptide repeat LIS44_12550 IPR011990 Tetratricopeptide-like helical domain superfamily LIS44_12550 IPR013026 Tetratricopeptide repeat-containing domain LIS44_12550 IPR013360 Pilus biogenesis/stability type IV, PilW LIS44_12560 IPR034907 Nucleoside diphosphate kinase-like domain LIS44_12560 IPR036850 Nucleoside diphosphate kinase-like domain superfamily LIS44_12560 IPR001564 Nucleoside diphosphate kinase LIS44_12560 IPR023005 Nucleoside diphosphate kinase, active site LIS44_12565 IPR007479 ISC system FeS cluster assembly, IscX LIS44_12565 IPR036762 IscX-like superfamily LIS44_12570 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily LIS44_12570 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LIS44_12610 IPR013116 Ketol-acid reductoisomerase, N-terminal LIS44_12610 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_12610 IPR013023 Ketol-acid reductoisomerase LIS44_12610 IPR000506 Ketol-acid reductoisomerase, C-terminal LIS44_12610 IPR014359 Ketol-acid reductoisomerase, prokaryotic LIS44_12610 IPR036291 NAD(P)-binding domain superfamily LIS44_12615 IPR019455 Acetolactate synthase, small subunit, C-terminal LIS44_12615 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal LIS44_12615 IPR004789 Acetolactate synthase, small subunit LIS44_12615 IPR039557 AHAS, ACT domain LIS44_12615 IPR002912 ACT domain LIS44_12620 IPR000399 TPP-binding enzyme, conserved site LIS44_12620 IPR012846 Acetolactate synthase, large subunit, biosynthetic LIS44_12620 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain LIS44_12620 IPR012000 Thiamine pyrophosphate enzyme, central domain LIS44_12620 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding LIS44_12620 IPR029061 Thiamin diphosphate-binding fold LIS44_12620 IPR039368 Acetolactate synthase large subunit, TPP binding domain LIS44_12620 IPR029035 DHS-like NAD/FAD-binding domain superfamily LIS44_12630 IPR015413 Methionyl/Leucyl tRNA synthetase LIS44_12630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_12630 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding LIS44_12630 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain LIS44_12630 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding LIS44_12630 IPR025709 Leucyl-tRNA synthetase, editing domain LIS44_12630 IPR002302 Leucine-tRNA ligase LIS44_12630 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site LIS44_12630 IPR002300 Aminoacyl-tRNA synthetase, class Ia LIS44_12645 IPR016131 Haemerythrin, iron-binding site LIS44_12645 IPR023504 Bacteriohemerythrin-like protein LIS44_12645 IPR012312 Haemerythrin-like LIS44_12645 IPR035938 Hemerythrin-like superfamily LIS44_12645 IPR012827 Haemerythrin, metal-binding domain LIS44_12650 IPR006143 RND efflux pump, membrane fusion protein LIS44_12650 IPR030190 Macrolide export protein MacA LIS44_12650 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LIS44_12655 IPR017871 ABC transporter, conserved site LIS44_12655 IPR003439 ABC transporter-like LIS44_12655 IPR003838 ABC transporter permease protein domain LIS44_12655 IPR003593 AAA+ ATPase domain LIS44_12655 IPR017911 ABC transporter, macrolide export, ATP-binding domain LIS44_12655 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12655 IPR025857 MacB-like periplasmic core domain LIS44_12660 IPR010131 RND efflux system, outer membrane lipoprotein, NodT LIS44_12660 IPR003423 Outer membrane efflux protein LIS44_12670 IPR000398 Thymidylate synthase LIS44_12670 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain LIS44_12670 IPR020940 Thymidylate synthase, active site LIS44_12670 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily LIS44_12675 IPR001796 Dihydrofolate reductase domain LIS44_12675 IPR012259 Dihydrofolate reductase LIS44_12675 IPR024072 Dihydrofolate reductase-like domain superfamily LIS44_12675 IPR017925 Dihydrofolate reductase conserved site LIS44_12690 IPR002569 Peptide methionine sulphoxide reductase MsrA LIS44_12690 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily LIS44_12700 IPR002898 MotA/TolQ/ExbB proton channel LIS44_12710 IPR004810 Formyltetrahydrofolate deformylase LIS44_12710 IPR036477 Formyl transferase, N-terminal domain superfamily LIS44_12710 IPR002376 Formyl transferase, N-terminal LIS44_12710 IPR002912 ACT domain LIS44_12710 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain LIS44_12715 IPR013571 Transcription regulator QacR, C-terminal LIS44_12715 IPR009057 Homeobox-like domain superfamily LIS44_12715 IPR001647 DNA-binding HTH domain, TetR-type LIS44_12715 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIS44_12715 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIS44_12720 IPR016161 Aldehyde/histidinol dehydrogenase LIS44_12720 IPR016163 Aldehyde dehydrogenase, C-terminal LIS44_12720 IPR029510 Aldehyde dehydrogenase, glutamic acid active site LIS44_12720 IPR016162 Aldehyde dehydrogenase, N-terminal LIS44_12720 IPR015590 Aldehyde dehydrogenase domain LIS44_12720 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent LIS44_12725 IPR034704 L28p-like LIS44_12725 IPR026569 Ribosomal protein L28/L24 LIS44_12725 IPR037147 Ribosomal protein L28/L24 superfamily LIS44_12725 IPR001383 Ribosomal protein L28 LIS44_12730 IPR011332 Zinc-binding ribosomal protein LIS44_12730 IPR038584 Ribosomal protein L33 superfamily LIS44_12730 IPR018264 Ribosomal protein L33, conserved site LIS44_12730 IPR001705 Ribosomal protein L33 LIS44_12735 IPR006153 Cation/H+ exchanger LIS44_12735 IPR003148 Regulator of K+ conductance, N-terminal LIS44_12735 IPR038770 Sodium/solute symporter superfamily LIS44_12735 IPR036291 NAD(P)-binding domain superfamily LIS44_12735 IPR004771 K+/H+ exchanger LIS44_12755 IPR005751 ATP-dependent DNA helicase PcrA LIS44_12755 IPR034739 UvrD/AddA helicase, N-terminal LIS44_12755 IPR014016 UvrD-like helicase, ATP-binding domain LIS44_12755 IPR000212 DNA helicase, UvrD/REP type LIS44_12755 IPR014017 UvrD-like DNA helicase, C-terminal LIS44_12755 IPR013986 DExx box DNA helicase domain superfamily LIS44_12755 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12760 IPR018193 Glycerate kinase, flavodoxin-like fold LIS44_12760 IPR018197 Glycerate kinase, restriction-enzyme-like fold LIS44_12760 IPR036129 Glycerate kinase superfamily LIS44_12760 IPR004381 Glycerate kinase LIS44_12800 IPR007236 SlyX LIS44_12805 IPR003593 AAA+ ATPase domain LIS44_12805 IPR032524 ABC transporter Uup, C-terminal LIS44_12805 IPR032781 ABC-transporter extension domain LIS44_12805 IPR017871 ABC transporter, conserved site LIS44_12805 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_12805 IPR003439 ABC transporter-like LIS44_12805 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily LIS44_12810 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP LIS44_12810 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase LIS44_12810 IPR004960 Bacterial lipid A biosynthesis acyltransferase LIS44_12830 IPR036291 NAD(P)-binding domain superfamily LIS44_12830 IPR012080 Aspartate-semialdehyde dehydrogenase LIS44_12830 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type LIS44_12830 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site LIS44_12830 IPR012280 Semialdehyde dehydrogenase, dimerisation domain LIS44_12830 IPR000534 Semialdehyde dehydrogenase, NAD-binding LIS44_12845 IPR027474 L-asparaginase, N-terminal LIS44_12845 IPR006033 Type I L-asparaginase family LIS44_12845 IPR036152 Asparaginase/glutaminase-like superfamily LIS44_12845 IPR006034 Asparaginase/glutaminase-like LIS44_12845 IPR020827 Asparaginase/glutaminase, active site 1 LIS44_12845 IPR027475 Asparaginase/glutaminase, active site 2 LIS44_12845 IPR040919 Asparaginase/glutaminase, C-terminal LIS44_12845 IPR027473 L-asparaginase, C-terminal LIS44_12845 IPR041725 Type I (cytosolic) L-asparaginase LIS44_12845 IPR037152 L-asparaginase, N-terminal domain superfamily LIS44_12850 IPR020095 Pseudouridine synthase I, TruA, C-terminal LIS44_12850 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain LIS44_12850 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIS44_12850 IPR001406 Pseudouridine synthase I, TruA LIS44_12860 IPR022967 RNA-binding domain, S1 LIS44_12860 IPR012340 Nucleic acid-binding, OB-fold LIS44_12860 IPR006196 RNA-binding domain, S1, IF1 type LIS44_12860 IPR004368 Translation initiation factor IF-1 LIS44_12870 IPR024084 Isopropylmalate dehydrogenase-like domain LIS44_12870 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site LIS44_12870 IPR004429 Isopropylmalate dehydrogenase LIS44_12880 IPR033940 3-isopropylmalate dehydratase, swivel domain LIS44_12880 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain LIS44_12880 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LIS44_12880 IPR004431 3-isopropylmalate dehydratase, small subunit LIS44_12885 IPR004430 3-isopropylmalate dehydratase, large subunit LIS44_12885 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 LIS44_12885 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain LIS44_12885 IPR018136 Aconitase family, 4Fe-4S cluster binding site LIS44_12885 IPR036008 Aconitase, iron-sulfur domain LIS44_12885 IPR033941 3-Isopropylmalate dehydratase, catalytic domain LIS44_12920 IPR020476 NUDIX hydrolase LIS44_12920 IPR015797 NUDIX hydrolase-like domain superfamily LIS44_12920 IPR020084 NUDIX hydrolase, conserved site LIS44_12920 IPR000086 NUDIX hydrolase domain LIS44_12920 IPR022927 RNA pyrophosphohydrolase RppH LIS44_12925 IPR036637 Phosphohistidine domain superfamily LIS44_12925 IPR006318 Phosphotransferase system, enzyme I-like LIS44_12925 IPR008731 Phosphotransferase system, enzyme I N-terminal LIS44_12925 IPR023151 PEP-utilising enzyme, conserved site LIS44_12925 IPR018274 PEP-utilising enzyme, active site LIS44_12925 IPR008279 PEP-utilising enzyme, mobile domain LIS44_12925 IPR029016 GAF-like domain superfamily LIS44_12925 IPR003018 GAF domain LIS44_12925 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIS44_12925 IPR000121 PEP-utilising enzyme, C-terminal LIS44_12925 IPR040442 Pyruvate kinase-like domain superfamily LIS44_12925 IPR036618 PtsI, HPr-binding domain superfamily LIS44_12935 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily LIS44_12935 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal LIS44_12935 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal LIS44_12935 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain LIS44_12935 IPR006089 Acyl-CoA dehydrogenase, conserved site LIS44_12935 IPR041504 Adaptive response protein AidB, N-terminal LIS44_12935 IPR034184 Putative acyl-CoA dehydrogenase AidB LIS44_12955 IPR000763 Catalase-peroxidase haem LIS44_12955 IPR002016 Haem peroxidase LIS44_12955 IPR010255 Haem peroxidase superfamily LIS44_12955 IPR019794 Peroxidase, active site LIS44_12965 IPR001279 Metallo-beta-lactamase LIS44_12965 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D LIS44_12965 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIS44_12970 IPR027469 Cation efflux transmembrane domain superfamily LIS44_12970 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LIS44_12970 IPR027470 Cation efflux protein, cytoplasmic domain LIS44_12970 IPR002524 Cation efflux protein LIS44_12980 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_12980 IPR023753 FAD/NAD(P)-binding domain LIS44_12980 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIS44_12980 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit LIS44_12980 IPR028202 Reductase, C-terminal LIS44_12985 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B LIS44_12985 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase LIS44_12990 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_12990 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_12990 IPR023643 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase HcaB LIS44_12990 IPR036291 NAD(P)-binding domain superfamily LIS44_12995 IPR023739 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin subunit LIS44_12995 IPR017941 Rieske [2Fe-2S] iron-sulphur domain LIS44_12995 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LIS44_13000 IPR032710 NTF2-like domain superfamily LIS44_13000 IPR000391 Ring-hydroxylating dioxygenase beta subunit LIS44_13000 IPR023712 3-phenylpropionate/cinnamic acid dioxygenase, beta subunit LIS44_13005 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit LIS44_13005 IPR017941 Rieske [2Fe-2S] iron-sulphur domain LIS44_13005 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LIS44_13005 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site LIS44_13005 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain LIS44_13005 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit LIS44_13010 IPR036390 Winged helix DNA-binding domain superfamily LIS44_13010 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_13010 IPR000847 Transcription regulator HTH, LysR LIS44_13010 IPR005119 LysR, substrate-binding LIS44_13020 IPR000639 Epoxide hydrolase-like LIS44_13020 IPR000073 Alpha/beta hydrolase fold-1 LIS44_13020 IPR029058 Alpha/Beta hydrolase fold LIS44_13025 IPR005318 Outer membrane porin, bacterial LIS44_13025 IPR023614 Porin domain superfamily LIS44_13030 IPR000891 Pyruvate carboxyltransferase LIS44_13030 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain LIS44_13030 IPR013785 Aldolase-type TIM barrel LIS44_13030 IPR017629 4-hydroxy-2-oxovalerate aldolase LIS44_13030 IPR012425 DmpG-like communication LIS44_13035 IPR036291 NAD(P)-binding domain superfamily LIS44_13035 IPR015426 Acetaldehyde dehydrogenase, C-terminal LIS44_13035 IPR003361 Acetaldehyde dehydrogenase LIS44_13035 IPR000534 Semialdehyde dehydrogenase, NAD-binding LIS44_13040 IPR011234 Fumarylacetoacetase-like, C-terminal LIS44_13040 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily LIS44_13040 IPR023793 2-keto-4-pentenoate hydratase LIS44_13050 IPR023214 HAD superfamily LIS44_13050 IPR041492 Haloacid dehalogenase-like hydrolase LIS44_13050 IPR023198 Phosphoglycolate phosphatase-like, domain 2 LIS44_13050 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic LIS44_13050 IPR037512 Phosphoglycolate phosphatase, prokaryotic LIS44_13050 IPR036412 HAD-like superfamily LIS44_13050 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LIS44_13050 IPR006439 HAD hydrolase, subfamily IA LIS44_13055 IPR006225 Pseudouridine synthase, RluC/RluD LIS44_13055 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site LIS44_13055 IPR006145 Pseudouridine synthase, RsuA/RluA LIS44_13055 IPR002942 RNA-binding S4 domain LIS44_13055 IPR036986 RNA-binding S4 domain superfamily LIS44_13055 IPR020103 Pseudouridine synthase, catalytic domain superfamily LIS44_13065 IPR025110 AMP-binding enzyme, C-terminal domain LIS44_13065 IPR020845 AMP-binding, conserved site LIS44_13065 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 LIS44_13065 IPR042099 AMP-dependent synthetase-like superfamily LIS44_13065 IPR000873 AMP-dependent synthetase/ligase LIS44_13095 IPR007168 Phage shock protein, PspC, N-terminal LIS44_13100 IPR000644 CBS domain LIS44_13105 IPR002310 Glycine-tRNA ligase, alpha subunit LIS44_13105 IPR006194 Glycine-tRNA synthetase, heterodimeric LIS44_13110 IPR006194 Glycine-tRNA synthetase, heterodimeric LIS44_13110 IPR015944 Glycine-tRNA ligase, beta subunit LIS44_13110 IPR008909 DALR anticodon binding LIS44_13165 IPR009051 Alpha-helical ferredoxin LIS44_13165 IPR023753 FAD/NAD(P)-binding domain LIS44_13165 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_13165 IPR028261 Dihydroprymidine dehydrogenase domain II LIS44_13175 IPR013088 Zinc finger, NHR/GATA-type LIS44_13175 IPR005584 DNA gyrase inhibitor YacG LIS44_13185 IPR001279 Metallo-beta-lactamase LIS44_13185 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIS44_13190 IPR001015 Ferrochelatase LIS44_13190 IPR019772 Ferrochelatase, active site LIS44_13190 IPR033644 Ferrochelatase, C-terminal LIS44_13190 IPR033659 Ferrochelatase, N-terminal LIS44_13200 IPR015942 Asp/Glu/hydantoin racemase LIS44_13200 IPR001920 Asp/Glu racemase LIS44_13200 IPR018187 Asp/Glu racemase, active site 1 LIS44_13200 IPR033134 Asp/Glu racemase, active site 2 LIS44_13200 IPR004391 Glutamate racemase LIS44_13210 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_13210 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LIS44_13210 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase LIS44_13215 IPR036868 TusA-like domain superfamily LIS44_13215 IPR022931 Sulfur carrier protein TusA LIS44_13215 IPR001455 TusA-like domain LIS44_13220 IPR000644 CBS domain LIS44_13220 IPR036318 FAD-binding, type PCMH-like superfamily LIS44_13220 IPR016169 FAD-binding, type PCMH, subdomain 2 LIS44_13220 IPR005170 Transporter-associated domain LIS44_13225 IPR036526 Carbon-nitrogen hydrolase superfamily LIS44_13225 IPR004563 Apolipoprotein N-acyltransferase LIS44_13225 IPR003010 Carbon-nitrogen hydrolase LIS44_13235 IPR000983 Bacterial general secretion pathway protein G-type pilin LIS44_13235 IPR012902 Prokaryotic N-terminal methylation site LIS44_13235 IPR013545 Type II secretion system protein G LIS44_13235 IPR010054 General secretion pathway protein G LIS44_13240 IPR018076 Type II secretion system F domain LIS44_13240 IPR042094 Type II secretion system F domain superfamily LIS44_13240 IPR011850 General secretion pathway protein F LIS44_13240 IPR003004 GspF/PilC family LIS44_13240 IPR001992 Type II secretion system conserved site LIS44_13250 IPR006153 Cation/H+ exchanger LIS44_13250 IPR004771 K+/H+ exchanger LIS44_13250 IPR020884 Glutathione-regulated potassium-efflux system protein KefB LIS44_13250 IPR038770 Sodium/solute symporter superfamily LIS44_13250 IPR036291 NAD(P)-binding domain superfamily LIS44_13250 IPR003148 Regulator of K+ conductance, N-terminal LIS44_13255 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily LIS44_13255 IPR016154 Heat shock protein Hsp33, C-terminal LIS44_13255 IPR000397 Heat shock protein Hsp33 LIS44_13255 IPR016153 Heat shock protein Hsp33, N-terminal LIS44_13270 IPR023859 DNA-binding protein, curved-DNA LIS44_13270 IPR002939 Chaperone DnaJ, C-terminal LIS44_13270 IPR001623 DnaJ domain LIS44_13270 IPR018253 DnaJ domain, conserved site LIS44_13270 IPR008971 HSP40/DnaJ peptide-binding LIS44_13270 IPR036869 Chaperone J-domain superfamily LIS44_13275 IPR022835 Chaperone modulatory protein CbpM LIS44_13285 IPR004488 Magnesium/cobalt transport protein CorA LIS44_13285 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB LIS44_13290 IPR003029 S1 domain LIS44_13290 IPR022967 RNA-binding domain, S1 LIS44_13290 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_13290 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily LIS44_13290 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain LIS44_13290 IPR027408 PNPase/RNase PH domain superfamily LIS44_13290 IPR001247 Exoribonuclease, phosphorolytic domain 1 LIS44_13290 IPR012340 Nucleic acid-binding, OB-fold LIS44_13290 IPR015847 Exoribonuclease, phosphorolytic domain 2 LIS44_13290 IPR036345 Exoribonuclease, PH domain 2 superfamily LIS44_13290 IPR012162 Polyribonucleotide nucleotidyltransferase LIS44_13290 IPR004088 K Homology domain, type 1 LIS44_13290 IPR004087 K Homology domain LIS44_13290 IPR036612 K Homology domain, type 1 superfamily LIS44_13295 IPR000589 Ribosomal protein S15 LIS44_13295 IPR005290 Ribosomal protein S15, bacterial-type LIS44_13295 IPR009068 S15/NS1, RNA-binding LIS44_13300 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain LIS44_13300 IPR027785 UvrD-like helicase C-terminal domain LIS44_13300 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_13300 IPR003593 AAA+ ATPase domain LIS44_13300 IPR006344 RecBCD enzyme subunit RecD LIS44_13305 IPR014017 UvrD-like DNA helicase, C-terminal LIS44_13305 IPR011604 Exonuclease, phage-type/RecB, C-terminal LIS44_13305 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_13305 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type LIS44_13305 IPR004586 RecBCD enzyme subunit RecB LIS44_13305 IPR011335 Restriction endonuclease type II-like LIS44_13305 IPR014016 UvrD-like helicase, ATP-binding domain LIS44_13305 IPR034739 UvrD/AddA helicase, N-terminal LIS44_13305 IPR000212 DNA helicase, UvrD/REP type LIS44_13320 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_13320 IPR022488 Polyphosphate kinase-2-related LIS44_13330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_13330 IPR004033 UbiE/COQ5 methyltransferase LIS44_13330 IPR023576 UbiE/COQ5 methyltransferase, conserved site LIS44_13340 IPR011009 Protein kinase-like domain superfamily LIS44_13340 IPR010232 Probable protein kinase UbiB LIS44_13340 IPR004147 UbiB domain LIS44_13370 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain LIS44_13370 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily LIS44_13370 IPR026660 Phosphoribosyl-AMP cyclohydrolase LIS44_13390 IPR005281 Monovalent cation:proton antiporter, subunit B LIS44_13390 IPR025383 Domain of unknown function DUF4040 LIS44_13390 IPR007182 Na+/H+ antiporter MnhB subunit-related protein LIS44_13390 IPR005663 Monovalent cation proton antiporter subunit A LIS44_13390 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit LIS44_13390 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal LIS44_13395 IPR006673 Mnh complex subunit C1 LIS44_13395 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like LIS44_13410 IPR007208 Na(+)/H(+) antiporter subunit F-like LIS44_13415 IPR005133 Na+/H+ antiporter subunit G LIS44_13420 IPR023799 Ribosome-binding factor A domain superfamily LIS44_13420 IPR015946 K homology domain-like, alpha/beta LIS44_13420 IPR000238 Ribosome-binding factor A LIS44_13425 IPR013575 Initiation factor 2 associated domain, bacterial LIS44_13425 IPR006847 Translation initiation factor IF-2, N-terminal LIS44_13425 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_13425 IPR005225 Small GTP-binding protein domain LIS44_13425 IPR000795 Transcription factor, GTP-binding domain LIS44_13425 IPR000178 Translation initiation factor aIF-2, bacterial-like LIS44_13425 IPR015760 Translation initiation factor IF- 2 LIS44_13425 IPR023115 Translation initiation factor IF- 2, domain 3 LIS44_13425 IPR036925 Translation initiation factor IF-2, domain 3 superfamily LIS44_13425 IPR009000 Translation protein, beta-barrel domain superfamily LIS44_13425 IPR009061 Putative DNA-binding domain superfamily LIS44_13430 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical LIS44_13430 IPR009019 K homology domain superfamily, prokaryotic type LIS44_13430 IPR012340 Nucleic acid-binding, OB-fold LIS44_13430 IPR030842 Transcription termination/antitermination protein NusA, bacterial LIS44_13430 IPR036555 NusA, N-terminal domain superfamily LIS44_13430 IPR022967 RNA-binding domain, S1 LIS44_13430 IPR003029 S1 domain LIS44_13430 IPR013735 Transcription factor NusA, N-terminal LIS44_13430 IPR010214 Transcription termination factor NusA, C-terminal duplication LIS44_13430 IPR010213 Transcription termination factor NusA LIS44_13430 IPR025249 KH domain, NusA-like LIS44_13430 IPR015946 K homology domain-like, alpha/beta LIS44_13435 IPR003728 Ribosome maturation factor RimP LIS44_13435 IPR028998 Ribosome maturation factor RimP, C-terminal LIS44_13435 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily LIS44_13435 IPR028989 Ribosome maturation factor RimP, N-terminal LIS44_13435 IPR035956 RimP, N-terminal domain superfamily LIS44_13460 IPR004692 Preprotein translocase SecG subunit LIS44_13465 IPR000652 Triosephosphate isomerase LIS44_13465 IPR020861 Triosephosphate isomerase, active site LIS44_13465 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic LIS44_13465 IPR035990 Triosephosphate isomerase superfamily LIS44_13465 IPR013785 Aldolase-type TIM barrel LIS44_13470 IPR013374 ATPase, type IV, pilus assembly, PilB LIS44_13470 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_13470 IPR001482 Type II/IV secretion system protein LIS44_13470 IPR037257 General secretory system II, protein E, N-terminal superfamily LIS44_13470 IPR007831 General secretory system II, protein E, N-terminal LIS44_13470 IPR042181 Type II secretion system, protein E, N-terminal LIS44_13475 IPR001992 Type II secretion system conserved site LIS44_13475 IPR018076 Type II secretion system F domain LIS44_13475 IPR003004 GspF/PilC family LIS44_13475 IPR042094 Type II secretion system F domain superfamily LIS44_13480 IPR000045 Prepilin type IV endopeptidase, peptidase domain LIS44_13480 IPR014032 Peptidase A24A, prepilin type IV, bacterial LIS44_13480 IPR010627 Peptidase A24A, N-terminal LIS44_13485 IPR001977 Dephospho-CoA kinase LIS44_13485 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_13495 IPR013123 RNA 2-O ribose methyltransferase, substrate binding LIS44_13495 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LIS44_13495 IPR004441 RNA methyltransferase TrmH family LIS44_13495 IPR001537 tRNA/rRNA methyltransferase, SpoU type LIS44_13495 IPR029028 Alpha/beta knot methyltransferases LIS44_13495 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB LIS44_13495 IPR029064 50S ribosomal protein L30e-like LIS44_13500 IPR009664 Pyrimidine/purine nucleoside phosphorylase LIS44_13500 IPR014710 RmlC-like jelly roll fold LIS44_13500 IPR011051 RmlC-like cupin domain superfamily LIS44_13505 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_13505 IPR004604 DNA recombination/repair protein RecN LIS44_13505 IPR003395 RecF/RecN/SMC, N-terminal LIS44_13510 IPR003774 Protein of unknown function UPF0301 LIS44_13515 IPR037027 YqgF/RNase H-like domain superfamily LIS44_13515 IPR005227 Putative pre-16S rRNA nuclease LIS44_13515 IPR006641 YqgF/RNase H-like domain LIS44_13515 IPR012337 Ribonuclease H-like superfamily LIS44_13520 IPR006143 RND efflux pump, membrane fusion protein LIS44_13520 IPR039562 Membrane fusion protein, biotin-lipoyl like domain LIS44_13520 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA LIS44_13560 IPR028366 Phosphate transport system protein PhoU LIS44_13560 IPR038078 PhoU-like domain superfamily LIS44_13560 IPR026022 PhoU domain LIS44_13575 IPR037509 Phosphomethylpyrimidine synthase LIS44_13575 IPR025747 ThiC-associated domain LIS44_13575 IPR038521 ThiC/Bza superfamily LIS44_13575 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B LIS44_13580 IPR004385 Nucleoside diphosphate pyrophosphatase LIS44_13580 IPR015797 NUDIX hydrolase-like domain superfamily LIS44_13580 IPR020084 NUDIX hydrolase, conserved site LIS44_13580 IPR000086 NUDIX hydrolase domain LIS44_13585 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA LIS44_13585 IPR029052 Metallo-dependent phosphatase-like LIS44_13585 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIS44_13590 IPR012784 RNA polymerase-binding transcription factor DksA LIS44_13590 IPR037187 DksA, N-terminal domain superfamily LIS44_13590 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria LIS44_13590 IPR000962 Zinc finger, DksA/TraR C4-type LIS44_13590 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LIS44_13595 IPR022380 Glutamyl-Q tRNA(Asp) synthetase LIS44_13595 IPR000924 Glutamyl/glutaminyl-tRNA synthetase LIS44_13595 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain LIS44_13595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_13605 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA LIS44_13605 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site LIS44_13605 IPR013437 Probable peptidoglycan glycosyltransferase FtsW LIS44_13610 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase LIS44_13610 IPR036615 Mur ligase, C-terminal domain superfamily LIS44_13610 IPR013221 Mur ligase, central LIS44_13610 IPR036565 Mur-like, catalytic domain superfamily LIS44_13610 IPR004101 Mur ligase, C-terminal LIS44_13630 IPR011010 DNA breaking-rejoining enzyme, catalytic core LIS44_13630 IPR013762 Integrase-like, catalytic domain superfamily LIS44_13630 IPR002104 Integrase, catalytic domain LIS44_13630 IPR010998 Integrase/recombinase, N-terminal LIS44_13630 IPR004107 Integrase, SAM-like, N-terminal LIS44_13630 IPR011932 Tyrosine recombinase XerD LIS44_13630 IPR023009 Tyrosine recombinase XerC/XerD LIS44_13635 IPR013766 Thioredoxin domain LIS44_13635 IPR036249 Thioredoxin-like superfamily LIS44_13635 IPR012336 Thioredoxin-like fold LIS44_13635 IPR017937 Thioredoxin, conserved site LIS44_13635 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal LIS44_13635 IPR033954 Disulphide bond isomerase, DsbC/G LIS44_13635 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily LIS44_13640 IPR016204 Homoserine dehydrogenase LIS44_13640 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding LIS44_13640 IPR001342 Homoserine dehydrogenase, catalytic LIS44_13640 IPR036291 NAD(P)-binding domain superfamily LIS44_13640 IPR019811 Homoserine dehydrogenase, conserved site LIS44_13640 IPR002912 ACT domain LIS44_13645 IPR001926 Pyridoxal-phosphate dependent enzyme LIS44_13645 IPR004450 Threonine synthase-like LIS44_13645 IPR026260 Threonine synthase, bacterial/archaeal LIS44_13645 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme LIS44_13645 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site LIS44_13650 IPR012338 Beta-lactamase/transpeptidase-like LIS44_13650 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A LIS44_13650 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal LIS44_13660 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_13660 IPR000014 PAS domain LIS44_13660 IPR005467 Histidine kinase domain LIS44_13660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_13660 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_13660 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_13660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_13680 IPR030923 LPS export ABC transporter permease LptG LIS44_13680 IPR005495 Permease LptG/LptF-related LIS44_13685 IPR030922 LPS export ABC transporter permease LptF LIS44_13685 IPR005495 Permease LptG/LptF-related LIS44_13690 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B LIS44_13690 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal LIS44_13690 IPR023042 Peptidase M17, leucine aminopeptidase LIS44_13690 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal LIS44_13705 IPR032818 DedA family LIS44_13705 IPR032816 SNARE associated Golgi protein LIS44_13710 IPR017938 Riboflavin synthase-like beta-barrel LIS44_13710 IPR026017 Lumazine-binding domain LIS44_13710 IPR001783 Lumazine-binding protein LIS44_13710 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily LIS44_13720 IPR016192 APOBEC/CMP deaminase, zinc-binding LIS44_13720 IPR002125 Cytidine and deoxycytidylate deaminase domain LIS44_13720 IPR016193 Cytidine deaminase-like LIS44_13720 IPR024072 Dihydrofolate reductase-like domain superfamily LIS44_13720 IPR004794 Riboflavin biosynthesis protein RibD LIS44_13720 IPR011549 Riboflavin-specific deaminase, C-terminal LIS44_13720 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal LIS44_13725 IPR005144 ATP-cone domain LIS44_13725 IPR003796 Ribonucleotide reductase regulator NrdR-like LIS44_13745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_13745 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_13745 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_13745 IPR004482 Mg chelatase-related protein LIS44_13745 IPR025158 Mg chelatase-related protein, C-terminal domain LIS44_13745 IPR001208 MCM domain LIS44_13745 IPR000523 Magnesium chelatase ChlI domain LIS44_13745 IPR003593 AAA+ ATPase domain LIS44_13760 IPR005318 Outer membrane porin, bacterial LIS44_13760 IPR023614 Porin domain superfamily LIS44_13765 IPR008162 Inorganic pyrophosphatase LIS44_13765 IPR036649 Inorganic pyrophosphatase superfamily LIS44_13780 IPR025110 AMP-binding enzyme, C-terminal domain LIS44_13780 IPR020845 AMP-binding, conserved site LIS44_13780 IPR000873 AMP-dependent synthetase/ligase LIS44_13780 IPR042099 AMP-dependent synthetase-like superfamily LIS44_13785 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative LIS44_13785 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily LIS44_13785 IPR013760 DNA topoisomerase, type IIA-like domain superfamily LIS44_13785 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal LIS44_13785 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal LIS44_13785 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat LIS44_13785 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta LIS44_13790 IPR011701 Major facilitator superfamily LIS44_13790 IPR020846 Major facilitator superfamily domain LIS44_13790 IPR036259 MFS transporter superfamily LIS44_13790 IPR005829 Sugar transporter, conserved site LIS44_13795 IPR005115 Uncharacterised domain UPF0126 LIS44_13800 IPR004027 SEC-C motif LIS44_13800 IPR032710 NTF2-like domain superfamily LIS44_13800 IPR023006 Uncharacterised protein family UPF0225 LIS44_13805 IPR000644 CBS domain LIS44_13805 IPR036318 FAD-binding, type PCMH-like superfamily LIS44_13805 IPR016169 FAD-binding, type PCMH, subdomain 2 LIS44_13805 IPR005496 Integral membrane protein TerC LIS44_13805 IPR005170 Transporter-associated domain LIS44_13810 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG LIS44_13810 IPR031100 LOG family LIS44_13815 IPR004638 Drug resistance transporter EmrB-like LIS44_13815 IPR011701 Major facilitator superfamily LIS44_13815 IPR020846 Major facilitator superfamily domain LIS44_13815 IPR036259 MFS transporter superfamily LIS44_13815 IPR023721 Multidrug resistance protein MdtD LIS44_13860 IPR013704 Uncharacterised protein family UPF0313, N-terminal LIS44_13860 IPR024560 Uncharacterised protein family UPF0313, C-terminal LIS44_13860 IPR022946 Uncharacterised protein family UPF0313 LIS44_13860 IPR007197 Radical SAM LIS44_13860 IPR020612 Methylthiotransferase, conserved site LIS44_13860 IPR023404 Radical SAM, alpha/beta horseshoe LIS44_13860 IPR006638 Elp3/MiaB/NifB LIS44_13895 IPR023635 Peptide deformylase LIS44_13895 IPR036821 Peptide deformylase superfamily LIS44_13905 IPR003488 DNA recombination-mediator protein A LIS44_13905 IPR041614 DprA, winged helix domain LIS44_13905 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_13910 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LIS44_13910 IPR023535 Threonylcarbamoyl-AMP synthase LIS44_13910 IPR006070 YrdC-like domain LIS44_13915 IPR000620 EamA domain LIS44_13925 IPR012337 Ribonuclease H-like superfamily LIS44_13925 IPR001584 Integrase, catalytic core LIS44_13925 IPR001598 Transposase, IS30, conserved site LIS44_13925 IPR036397 Ribonuclease H superfamily LIS44_13925 IPR009057 Homeobox-like domain superfamily LIS44_13950 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LIS44_13950 IPR020843 Polyketide synthase, enoylreductase domain LIS44_13950 IPR036291 NAD(P)-binding domain superfamily LIS44_13950 IPR011032 GroES-like superfamily LIS44_13950 IPR013154 Alcohol dehydrogenase, N-terminal LIS44_13950 IPR013149 Alcohol dehydrogenase, C-terminal LIS44_13965 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit LIS44_13965 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal LIS44_13965 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal LIS44_13965 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily LIS44_13975 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily LIS44_13975 IPR000131 ATP synthase, F1 complex, gamma subunit LIS44_13975 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site LIS44_13980 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_13980 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain LIS44_13980 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily LIS44_13980 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain LIS44_13980 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily LIS44_13980 IPR005294 ATP synthase, F1 complex, alpha subunit LIS44_13980 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain LIS44_13980 IPR000793 ATP synthase, alpha subunit, C-terminal LIS44_13980 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily LIS44_13980 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site LIS44_13990 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily LIS44_13990 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast LIS44_13990 IPR005864 ATP synthase, F0 complex, subunit b, bacterial LIS44_13995 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast LIS44_13995 IPR000454 ATP synthase, F0 complex, subunit C LIS44_13995 IPR035921 F/V-ATP synthase subunit C superfamily LIS44_13995 IPR038662 F1F0 ATP synthase subunit C superfamily LIS44_13995 IPR002379 V-ATPase proteolipid subunit C-like domain LIS44_13995 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site LIS44_14000 IPR035908 ATP synthase, F0 complex, subunit A superfamily LIS44_14000 IPR000568 ATP synthase, F0 complex, subunit A LIS44_14000 IPR023011 ATP synthase, F0 complex, subunit A, active site LIS44_14020 IPR003439 ABC transporter-like LIS44_14020 IPR017871 ABC transporter, conserved site LIS44_14020 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_14020 IPR017882 Zinc import ATP-binding protein ZnuC LIS44_14020 IPR003593 AAA+ ATPase domain LIS44_14025 IPR037294 ABC transporter, BtuC-like LIS44_14025 IPR001626 ABC transporter, TroCD-like LIS44_14030 IPR007553 Domain of unknown function DUF523 LIS44_14040 IPR001123 Amino acid exporter protein, LeuE-type LIS44_14040 IPR004778 Homoserine/Threonine efflux protein LIS44_14045 IPR006314 Dyp-type peroxidase LIS44_14045 IPR011008 Dimeric alpha-beta barrel LIS44_14060 IPR004839 Aminotransferase, class I/classII LIS44_14060 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_14060 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_14060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_14065 IPR002528 Multi antimicrobial extrusion protein LIS44_14070 IPR011251 Luciferase-like domain LIS44_14070 IPR036661 Luciferase-like domain superfamily LIS44_14070 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A LIS44_14075 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A LIS44_14075 IPR011251 Luciferase-like domain LIS44_14075 IPR036661 Luciferase-like domain superfamily LIS44_14080 IPR003593 AAA+ ATPase domain LIS44_14080 IPR003439 ABC transporter-like LIS44_14080 IPR017871 ABC transporter, conserved site LIS44_14080 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_14080 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB LIS44_14090 IPR025944 Sigma-54 interaction domain, conserved site LIS44_14090 IPR029995 Transcriptional activator SfnR/FlbD LIS44_14090 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LIS44_14090 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LIS44_14090 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_14090 IPR009057 Homeobox-like domain superfamily LIS44_14090 IPR003593 AAA+ ATPase domain LIS44_14090 IPR002078 RNA polymerase sigma factor 54 interaction domain LIS44_14095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_14095 IPR035906 MetI-like superfamily LIS44_14100 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_14100 IPR003439 ABC transporter-like LIS44_14100 IPR003593 AAA+ ATPase domain LIS44_14105 IPR006311 Twin-arginine translocation pathway, signal sequence LIS44_14110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_14110 IPR035906 MetI-like superfamily LIS44_14115 IPR035906 MetI-like superfamily LIS44_14115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like LIS44_14140 IPR012337 Ribonuclease H-like superfamily LIS44_14140 IPR002559 Transposase, IS4-like LIS44_14140 IPR024473 Transposase, IS4, N-terminal LIS44_14145 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_14145 IPR036291 NAD(P)-binding domain superfamily LIS44_14145 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_14155 IPR001867 OmpR/PhoB-type DNA-binding domain LIS44_14155 IPR016032 Signal transduction response regulator, C-terminal effector LIS44_14155 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB LIS44_14155 IPR001789 Signal transduction response regulator, receiver domain LIS44_14155 IPR039420 Transcriptional regulatory protein WalR-like LIS44_14155 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_14155 IPR011006 CheY-like superfamily LIS44_14160 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR LIS44_14160 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_14160 IPR021766 Phosphate regulon sensor protein PhoR LIS44_14160 IPR013767 PAS fold LIS44_14160 IPR035965 PAS domain superfamily LIS44_14160 IPR000014 PAS domain LIS44_14160 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_14160 IPR005467 Histidine kinase domain LIS44_14160 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_14160 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_14160 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_14175 IPR012093 Pirin LIS44_14175 IPR008778 Pirin, C-terminal domain LIS44_14175 IPR003829 Pirin, N-terminal domain LIS44_14175 IPR014710 RmlC-like jelly roll fold LIS44_14175 IPR011051 RmlC-like cupin domain superfamily LIS44_14180 IPR011006 CheY-like superfamily LIS44_14180 IPR000160 GGDEF domain LIS44_14180 IPR029787 Nucleotide cyclase LIS44_14180 IPR001789 Signal transduction response regulator, receiver domain LIS44_14190 IPR022310 NAD/GMP synthase LIS44_14190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_14190 IPR025777 GMP synthetase ATP pyrophosphatase domain LIS44_14190 IPR017926 Glutamine amidotransferase LIS44_14190 IPR004739 GMP synthase, glutamine amidotransferase LIS44_14190 IPR001674 GMP synthase, C-terminal LIS44_14190 IPR029062 Class I glutamine amidotransferase-like LIS44_14190 IPR022955 GMP synthase LIS44_14220 IPR025669 AAA domain LIS44_14220 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_14230 IPR002634 BolA protein LIS44_14230 IPR036065 BolA-like superfamily LIS44_14265 IPR010781 Protein of unknown function DUF1376 LIS44_14415 IPR013412 CRISPR-associated RAMP Csm3 LIS44_14415 IPR005537 CRISPR type III-associated protein LIS44_14430 IPR006674 HD domain LIS44_14430 IPR041062 Csm1, subunit domain B LIS44_14430 IPR013408 CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 LIS44_14430 IPR000160 GGDEF domain LIS44_14445 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_14445 IPR039430 Thymidylate kinase-like domain LIS44_14445 IPR018095 Thymidylate kinase, conserved site LIS44_14445 IPR018094 Thymidylate kinase LIS44_14470 IPR002729 CRISPR-associated protein Cas1 LIS44_14470 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain LIS44_14470 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain LIS44_14495 IPR012893 HipA-like, C-terminal LIS44_14495 IPR017508 HipA, N-terminal subdomain 1 LIS44_14595 IPR002589 Macro domain LIS44_14605 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB LIS44_14605 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily LIS44_14605 IPR032677 GTP cyclohydrolase II LIS44_14605 IPR036144 RibA-like superfamily LIS44_14610 IPR002180 Lumazine/riboflavin synthase LIS44_14610 IPR034964 Lumazine synthase LIS44_14610 IPR036467 Lumazine/riboflavin synthase superfamily LIS44_14615 IPR011605 NusB antitermination factor LIS44_14615 IPR006027 NusB/RsmB/TIM44 LIS44_14615 IPR035926 NusB-like superfamily LIS44_14625 IPR026037 Phosphatidylglycerophosphatase A LIS44_14625 IPR036681 PgpA-like superfamily LIS44_14625 IPR007686 YutG/PgpA domain LIS44_14630 IPR011004 Trimeric LpxA-like superfamily LIS44_14630 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase LIS44_14630 IPR038009 GlmU, C-terminal LbH domain LIS44_14630 IPR001451 Hexapeptide repeat LIS44_14630 IPR018357 Hexapeptide transferase, conserved site LIS44_14630 IPR025877 MobA-like NTP transferase LIS44_14630 IPR029044 Nucleotide-diphospho-sugar transferases LIS44_14635 IPR029055 Nucleophile aminohydrolases, N-terminal LIS44_14635 IPR001347 Sugar isomerase (SIS) LIS44_14635 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising LIS44_14635 IPR035490 GlmS/FrlB, SIS domain 2 LIS44_14635 IPR017932 Glutamine amidotransferase type 2 domain LIS44_14635 IPR035466 GlmS/AgaS, SIS domain 1 LIS44_14640 IPR016066 Alpha-D-phosphohexomutase, conserved site LIS44_14640 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily LIS44_14640 IPR005843 Alpha-D-phosphohexomutase, C-terminal LIS44_14640 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III LIS44_14640 IPR005841 Alpha-D-phosphohexomutase superfamily LIS44_14640 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III LIS44_14640 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I LIS44_14640 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II LIS44_14645 IPR036291 NAD(P)-binding domain superfamily LIS44_14645 IPR016040 NAD(P)-binding domain LIS44_14645 IPR005886 UDP-glucose 4-epimerase LIS44_14650 IPR001672 Phosphoglucose isomerase (PGI) LIS44_14650 IPR023096 Phosphoglucose isomerase, C-terminal LIS44_14650 IPR018189 Phosphoglucose isomerase, conserved site LIS44_14650 IPR035476 Phosphoglucose isomerase, SIS domain 1 LIS44_14650 IPR035482 Phosphoglucose isomerase, SIS domain 2 LIS44_14655 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_14655 IPR036291 NAD(P)-binding domain superfamily LIS44_14655 IPR017476 UDP-glucose/GDP-mannose dehydrogenase LIS44_14655 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily LIS44_14655 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation LIS44_14655 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal LIS44_14655 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal LIS44_14655 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type LIS44_14660 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type LIS44_14660 IPR029044 Nucleotide-diphospho-sugar transferases LIS44_14660 IPR005835 Nucleotidyl transferase domain LIS44_14665 IPR003362 Bacterial sugar transferase LIS44_14665 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ LIS44_14665 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase LIS44_14670 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase LIS44_14670 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal LIS44_14670 IPR005835 Nucleotidyl transferase domain LIS44_14670 IPR029044 Nucleotide-diphospho-sugar transferases LIS44_14670 IPR014710 RmlC-like jelly roll fold LIS44_14670 IPR011051 RmlC-like cupin domain superfamily LIS44_14675 IPR017814 Mycothiol biosynthesis protein, MshA LIS44_14675 IPR001296 Glycosyl transferase, family 1 LIS44_14675 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LIS44_14680 IPR001296 Glycosyl transferase, family 1 LIS44_14690 IPR001451 Hexapeptide repeat LIS44_14690 IPR018357 Hexapeptide transferase, conserved site LIS44_14690 IPR010493 Serine acetyltransferase, N-terminal LIS44_14690 IPR042122 Serine acetyltransferase, N-terminal domain superfamily LIS44_14690 IPR005881 Serine O-acetyltransferase LIS44_14690 IPR011004 Trimeric LpxA-like superfamily LIS44_14705 IPR001509 NAD-dependent epimerase/dehydratase LIS44_14705 IPR036291 NAD(P)-binding domain superfamily LIS44_14710 IPR036291 NAD(P)-binding domain superfamily LIS44_14710 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type LIS44_14710 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal LIS44_14710 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_14710 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily LIS44_14710 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal LIS44_14710 IPR017476 UDP-glucose/GDP-mannose dehydrogenase LIS44_14710 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation LIS44_14715 IPR036291 NAD(P)-binding domain superfamily LIS44_14715 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain LIS44_14715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_14720 IPR015424 Pyridoxal phosphate-dependent transferase LIS44_14720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 LIS44_14720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain LIS44_14720 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LIS44_14725 IPR001451 Hexapeptide repeat LIS44_14725 IPR041561 PglD, N-terminal LIS44_14725 IPR020019 Sialic acid O-acyltransferase NeuD-like LIS44_14725 IPR011004 Trimeric LpxA-like superfamily LIS44_14730 IPR003362 Bacterial sugar transferase LIS44_14740 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LIS44_14740 IPR001296 Glycosyl transferase, family 1 LIS44_14745 IPR001296 Glycosyl transferase, family 1 LIS44_14745 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LIS44_14750 IPR001296 Glycosyl transferase, family 1 LIS44_14750 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LIS44_14755 IPR018357 Hexapeptide transferase, conserved site LIS44_14755 IPR011004 Trimeric LpxA-like superfamily LIS44_14755 IPR001451 Hexapeptide repeat LIS44_14770 IPR036291 NAD(P)-binding domain superfamily LIS44_14770 IPR001509 NAD-dependent epimerase/dehydratase LIS44_14775 IPR036291 NAD(P)-binding domain superfamily LIS44_14775 IPR017476 UDP-glucose/GDP-mannose dehydrogenase LIS44_14775 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal LIS44_14775 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily LIS44_14775 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation LIS44_14775 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal LIS44_14775 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase LIS44_14775 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily LIS44_14780 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain LIS44_14780 IPR003715 Polysaccharide export protein LIS44_14780 IPR019554 Soluble ligand binding domain LIS44_14785 IPR023485 Phosphotyrosine protein phosphatase I LIS44_14785 IPR036196 Phosphotyrosine protein phosphatase I superfamily LIS44_14785 IPR017867 Protein-tyrosine phosphatase, low molecular weight LIS44_14790 IPR025669 AAA domain LIS44_14790 IPR005702 Exopolysaccharide synthesis protein LIS44_14790 IPR032807 Tyrosine kinase, G-rich domain LIS44_14790 IPR003856 Polysaccharide chain length determinant N-terminal domain LIS44_14790 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_14795 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily LIS44_14795 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LIS44_14795 IPR008104 Macrophage infectivity potentiator LIS44_14795 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal LIS44_14800 IPR008104 Macrophage infectivity potentiator LIS44_14800 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain LIS44_14800 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal LIS44_14800 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily LIS44_14815 IPR015797 NUDIX hydrolase-like domain superfamily LIS44_14815 IPR029119 MutY, C-terminal LIS44_14815 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LIS44_14815 IPR000445 Helix-hairpin-helix motif LIS44_14815 IPR003265 HhH-GPD domain LIS44_14815 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif LIS44_14815 IPR004036 Endonuclease III-like, conserved site-2 LIS44_14815 IPR011257 DNA glycosylase LIS44_14815 IPR005760 A/G-specific adenine glycosylase MutY LIS44_14815 IPR004035 Endonuclease III, iron-sulphur binding site LIS44_14830 IPR005019 Methyladenine glycosylase LIS44_14830 IPR011257 DNA glycosylase LIS44_14830 IPR004597 DNA-3-methyladenine glycosylase I LIS44_14835 IPR020843 Polyketide synthase, enoylreductase domain LIS44_14835 IPR036291 NAD(P)-binding domain superfamily LIS44_14835 IPR011032 GroES-like superfamily LIS44_14835 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site LIS44_14835 IPR013149 Alcohol dehydrogenase, C-terminal LIS44_14835 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LIS44_14835 IPR013154 Alcohol dehydrogenase, N-terminal LIS44_14845 IPR022663 Dihydrodipicolinate reductase, C-terminal LIS44_14845 IPR000846 Dihydrodipicolinate reductase, N-terminal LIS44_14845 IPR022664 Dihydrodipicolinate reductase, conserved site LIS44_14845 IPR023940 Dihydrodipicolinate reductase LIS44_14845 IPR036291 NAD(P)-binding domain superfamily LIS44_14860 IPR036869 Chaperone J-domain superfamily LIS44_14860 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily LIS44_14860 IPR001305 Heat shock protein DnaJ, cysteine-rich domain LIS44_14860 IPR008971 HSP40/DnaJ peptide-binding LIS44_14860 IPR018253 DnaJ domain, conserved site LIS44_14860 IPR001623 DnaJ domain LIS44_14860 IPR012724 Chaperone DnaJ LIS44_14860 IPR002939 Chaperone DnaJ, C-terminal LIS44_14870 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LIS44_14870 IPR001036 Acriflavin resistance protein LIS44_14875 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LIS44_14875 IPR030190 Macrolide export protein MacA LIS44_14875 IPR006143 RND efflux pump, membrane fusion protein LIS44_14880 IPR001647 DNA-binding HTH domain, TetR-type LIS44_14880 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily LIS44_14880 IPR013572 Transcription regulator MAATS, C-terminal LIS44_14880 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LIS44_14880 IPR009057 Homeobox-like domain superfamily LIS44_14885 IPR021135 Phosphoenolpyruvate carboxylase LIS44_14885 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type LIS44_14885 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site LIS44_14885 IPR033129 Phosphoenolpyruvate carboxylase, His active site LIS44_14885 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily LIS44_14890 IPR019918 Pyrimidine permease RutG, predicted LIS44_14890 IPR006042 Xanthine/uracil permease LIS44_14890 IPR006043 Xanthine/uracil/vitamin C permease LIS44_14910 IPR037237 IlvD/EDD, N-terminal domain LIS44_14910 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site LIS44_14910 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase LIS44_14910 IPR004404 Dihydroxy-acid dehydratase LIS44_14910 IPR042096 Dihydroxy-acid dehydratase, C-terminal LIS44_14915 IPR012337 Ribonuclease H-like superfamily LIS44_14915 IPR002559 Transposase, IS4-like LIS44_14915 IPR024473 Transposase, IS4, N-terminal LIS44_14925 IPR005794 Methionyl-tRNA formyltransferase LIS44_14925 IPR005793 Formyl transferase, C-terminal LIS44_14925 IPR037022 Formyl transferase, C-terminal domain superfamily LIS44_14925 IPR002376 Formyl transferase, N-terminal LIS44_14925 IPR036477 Formyl transferase, N-terminal domain superfamily LIS44_14925 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain LIS44_14925 IPR011034 Formyl transferase-like, C-terminal domain superfamily LIS44_14930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_14930 IPR004573 rRNA small subunit methyltransferase B LIS44_14930 IPR023267 RNA (C5-cytosine) methyltransferase LIS44_14930 IPR006027 NusB/RsmB/TIM44 LIS44_14930 IPR035926 NusB-like superfamily LIS44_14930 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type LIS44_14930 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site LIS44_14950 IPR037272 Sodium:neurotransmitter symporter superfamily LIS44_14950 IPR000175 Sodium:neurotransmitter symporter LIS44_15000 IPR029000 Cyclophilin-like domain superfamily LIS44_15000 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site LIS44_15000 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain LIS44_15010 IPR029058 Alpha/Beta hydrolase fold LIS44_15010 IPR013094 Alpha/beta hydrolase fold-3 LIS44_15020 IPR000740 GrpE nucleotide exchange factor LIS44_15020 IPR013805 GrpE nucleotide exchange factor, coiled-coil LIS44_15020 IPR009012 GrpE nucleotide exchange factor, head LIS44_15025 IPR012725 Chaperone DnaK LIS44_15025 IPR018181 Heat shock protein 70, conserved site LIS44_15025 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily LIS44_15025 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily LIS44_15025 IPR013126 Heat shock protein 70 family LIS44_15040 IPR035903 HesB-like domain superfamily LIS44_15040 IPR023063 FeS cluster insertion protein ErpA LIS44_15040 IPR016092 FeS cluster insertion protein LIS44_15040 IPR000361 FeS cluster biogenesis LIS44_15040 IPR017870 FeS cluster insertion, C-terminal, conserved site LIS44_15045 IPR038404 TRAP transporter solute receptor DctP superfamily LIS44_15050 IPR038404 TRAP transporter solute receptor DctP superfamily LIS44_15055 IPR038404 TRAP transporter solute receptor DctP superfamily LIS44_15065 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_15065 IPR003593 AAA+ ATPase domain LIS44_15065 IPR032781 ABC-transporter extension domain LIS44_15065 IPR003439 ABC transporter-like LIS44_15065 IPR017871 ABC transporter, conserved site LIS44_15085 IPR027469 Cation efflux transmembrane domain superfamily LIS44_15085 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LIS44_15085 IPR002524 Cation efflux protein LIS44_15085 IPR027470 Cation efflux protein, cytoplasmic domain LIS44_15090 IPR003735 Metal-sensitive transcriptional repressor LIS44_15090 IPR038390 Metal-sensitive transcriptional repressor superfamily LIS44_15100 IPR025867 MnmE, helical domain LIS44_15100 IPR027368 tRNA modification GTPase MnmE domain 2 LIS44_15100 IPR005225 Small GTP-binding protein domain LIS44_15100 IPR006073 GTP binding domain LIS44_15100 IPR018948 GTP-binding protein TrmE, N-terminal LIS44_15100 IPR031168 TrmE-type guanine nucleotide-binding domain LIS44_15100 IPR004520 tRNA modification GTPase MnmE LIS44_15100 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 LIS44_15100 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_15110 IPR002696 Putative membrane protein insertion efficiency factor LIS44_15115 IPR020568 Ribosomal protein S5 domain 2-type fold LIS44_15115 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LIS44_15115 IPR000100 Ribonuclease P LIS44_15115 IPR020539 Ribonuclease P, conserved site LIS44_15120 IPR000271 Ribosomal protein L34 LIS44_15120 IPR020939 Ribosomal protein L34, conserved site LIS44_15135 IPR009241 Toxin HigB-like LIS44_15140 IPR008162 Inorganic pyrophosphatase LIS44_15140 IPR036649 Inorganic pyrophosphatase superfamily LIS44_15145 IPR003691 Putative fluoride ion transporter CrcB LIS44_15155 IPR036513 STAS domain superfamily LIS44_15155 IPR002645 STAS domain LIS44_15155 IPR011547 SLC26A/SulP transporter domain LIS44_15155 IPR018045 Sulphate anion transporter, conserved site LIS44_15155 IPR001902 SLC26A/SulP transporter LIS44_15170 IPR000525 Initiator Rep protein LIS44_15170 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_15170 IPR036390 Winged helix DNA-binding domain superfamily LIS44_15180 IPR005094 Endonuclease relaxase, MobA/VirD2 LIS44_15190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_15190 IPR002052 DNA methylase, N-6 adenine-specific, conserved site LIS44_15190 IPR003356 DNA methylase, adenine-specific LIS44_15245 IPR009241 Toxin HigB-like LIS44_15310 IPR007159 SpoVT-AbrB domain LIS44_15310 IPR037914 SpoVT-AbrB domain superfamily LIS44_15315 IPR009057 Homeobox-like domain superfamily LIS44_15315 IPR006118 Recombinase, conserved site LIS44_15315 IPR006119 Resolvase, N-terminal catalytic domain LIS44_15315 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LIS44_15315 IPR006120 Resolvase, HTH domain LIS44_15320 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily LIS44_15320 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family LIS44_15355 IPR040980 SWI2/SNF2 ATPase LIS44_15355 IPR004473 Restriction endonuclease, type I, HsdR LIS44_15355 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal LIS44_15355 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_15355 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIS44_15355 IPR021810 Protein of unknown function DUF3387 LIS44_15365 IPR001584 Integrase, catalytic core LIS44_15365 IPR012337 Ribonuclease H-like superfamily LIS44_15365 IPR036397 Ribonuclease H superfamily LIS44_15365 IPR001598 Transposase, IS30, conserved site LIS44_15365 IPR009057 Homeobox-like domain superfamily LIS44_15390 IPR022625 Type-1 restriction enzyme R protein, C-terminal LIS44_15390 IPR004473 Restriction endonuclease, type I, HsdR LIS44_15390 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal LIS44_15390 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_15390 IPR014001 Helicase superfamily 1/2, ATP-binding domain LIS44_15390 IPR040980 SWI2/SNF2 ATPase LIS44_15395 IPR000055 Restriction endonuclease, type I, HsdS LIS44_15415 IPR009057 Homeobox-like domain superfamily LIS44_15415 IPR006118 Recombinase, conserved site LIS44_15415 IPR006119 Resolvase, N-terminal catalytic domain LIS44_15415 IPR006120 Resolvase, HTH domain LIS44_15415 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LIS44_15430 IPR024474 Zinc-finger binding domain of transposase IS66 LIS44_15430 IPR004291 Transposase, IS66 LIS44_15430 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_15430 IPR039552 Transposase IS66, C-terminal LIS44_15430 IPR024463 Transposase TnpC, homeodomain LIS44_15470 IPR041679 DNA2/NAM7 helicase-like, AAA domain LIS44_15470 IPR041677 DNA2/NAM7 helicase, AAA domain LIS44_15470 IPR025103 Protein of unknown function DUF4011 LIS44_15470 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_15485 IPR032874 DDE domain LIS44_15485 IPR012337 Ribonuclease H-like superfamily LIS44_15485 IPR036397 Ribonuclease H superfamily LIS44_15485 IPR001584 Integrase, catalytic core LIS44_15490 IPR018383 Uncharacterised protein family UPF0324, prokaryote LIS44_15490 IPR004630 Uncharacterised protein family UPF0324, bacteria LIS44_15495 IPR005119 LysR, substrate-binding LIS44_15495 IPR000847 Transcription regulator HTH, LysR LIS44_15495 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_15495 IPR036390 Winged helix DNA-binding domain superfamily LIS44_15510 IPR010354 Oleate hydratase LIS44_15510 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_15515 IPR025668 Transposase DDE domain LIS44_15520 IPR036397 Ribonuclease H superfamily LIS44_15520 IPR012337 Ribonuclease H-like superfamily LIS44_15520 IPR001584 Integrase, catalytic core LIS44_15520 IPR009057 Homeobox-like domain superfamily LIS44_15520 IPR001598 Transposase, IS30, conserved site LIS44_15550 IPR003812 Fido domain LIS44_15550 IPR036597 Fido-like domain superfamily LIS44_15580 IPR017961 DNA polymerase, Y-family, little finger domain LIS44_15580 IPR025188 Domain of unknown function DUF4113 LIS44_15580 IPR001126 UmuC domain LIS44_15580 IPR036775 DNA polymerase, Y-family, little finger domain superfamily LIS44_15585 IPR036286 LexA/Signal peptidase-like superfamily LIS44_15585 IPR006200 Transcription regulator LexA LIS44_15585 IPR039418 LexA-like LIS44_15585 IPR006199 LexA repressor, DNA-binding domain LIS44_15585 IPR006197 Peptidase S24, LexA-like LIS44_15585 IPR015927 Peptidase S24/S26A/S26B/S26C LIS44_15585 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_15585 IPR011991 ArsR-like helix-turn-helix domain LIS44_15585 IPR036390 Winged helix DNA-binding domain superfamily LIS44_15605 IPR000836 Phosphoribosyltransferase domain LIS44_15605 IPR006528 Phage head morphogenesis domain LIS44_15615 IPR002645 STAS domain LIS44_15615 IPR001902 SLC26A/SulP transporter LIS44_15615 IPR011547 SLC26A/SulP transporter domain LIS44_15615 IPR036513 STAS domain superfamily LIS44_15625 IPR024953 Polyphosphate kinase middle domain LIS44_15625 IPR036830 Polyphosphate kinase middle domain superfamily LIS44_15625 IPR025200 Polyphosphate kinase C-terminal domain 2 LIS44_15625 IPR041108 Polyphosphate kinase, C-terminal domain 1 LIS44_15625 IPR025198 Polyphosphate kinase N-terminal domain LIS44_15625 IPR036832 Polyphosphate kinase N-terminal domain superfamily LIS44_15625 IPR003414 Polyphosphate kinase LIS44_15630 IPR011283 Acetoacetyl-CoA reductase LIS44_15630 IPR036291 NAD(P)-binding domain superfamily LIS44_15630 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_15630 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_15640 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I LIS44_15640 IPR029058 Alpha/Beta hydrolase fold LIS44_15640 IPR000073 Alpha/beta hydrolase fold-1 LIS44_15640 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain LIS44_15645 IPR020613 Thiolase, conserved site LIS44_15645 IPR020616 Thiolase, N-terminal LIS44_15645 IPR020617 Thiolase, C-terminal LIS44_15645 IPR020610 Thiolase, active site LIS44_15645 IPR020615 Thiolase, acyl-enzyme intermediate active site LIS44_15645 IPR016039 Thiolase-like LIS44_15645 IPR002155 Thiolase LIS44_15650 IPR006146 5'-Nucleotidase, conserved site LIS44_15650 IPR036907 5'-Nucleotidase, C-terminal domain superfamily LIS44_15650 IPR008334 5'-Nucleotidase, C-terminal LIS44_15650 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type LIS44_15650 IPR029052 Metallo-dependent phosphatase-like LIS44_15650 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN LIS44_15650 IPR006179 5'-Nucleotidase/apyrase LIS44_15675 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily LIS44_15675 IPR007357 Deoxyribodipyrimidine photolyase-related protein LIS44_15675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_15700 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_15700 IPR002937 Amine oxidase LIS44_15710 IPR005119 LysR, substrate-binding LIS44_15710 IPR000847 Transcription regulator HTH, LysR LIS44_15710 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_15710 IPR036390 Winged helix DNA-binding domain superfamily LIS44_15715 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase LIS44_15715 IPR003342 Glycosyl transferase family 39/83 LIS44_15720 IPR000477 Reverse transcriptase domain LIS44_15720 IPR024937 Domain X LIS44_15730 IPR015797 NUDIX hydrolase-like domain superfamily LIS44_15730 IPR022925 NADH pyrophosphatase NudC LIS44_15730 IPR015376 Zinc ribbon, NADH pyrophosphatase LIS44_15730 IPR000086 NUDIX hydrolase domain LIS44_15730 IPR020084 NUDIX hydrolase, conserved site LIS44_15750 IPR011129 Cold shock domain LIS44_15750 IPR002059 Cold-shock protein, DNA-binding LIS44_15750 IPR012156 Cold shock, CspA LIS44_15750 IPR019844 Cold-shock (CSD) domain LIS44_15750 IPR012340 Nucleic acid-binding, OB-fold LIS44_15780 IPR024463 Transposase TnpC, homeodomain LIS44_15780 IPR004291 Transposase, IS66 LIS44_15780 IPR039552 Transposase IS66, C-terminal LIS44_15780 IPR024474 Zinc-finger binding domain of transposase IS66 LIS44_15790 IPR009057 Homeobox-like domain superfamily LIS44_15800 IPR012674 Calycin LIS44_15800 IPR022271 Lipocalin, ApoD type LIS44_15800 IPR002446 Lipocalin, bacterial LIS44_15800 IPR022272 Lipocalin family conserved site LIS44_15800 IPR000566 Lipocalin/cytosolic fatty-acid binding domain LIS44_15820 IPR003333 Mycolic acid cyclopropane synthase LIS44_15820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_15830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LIS44_15830 IPR010280 (Uracil-5)-methyltransferase family LIS44_15830 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA LIS44_15830 IPR030390 RNA methyltransferase TrmA, active site LIS44_15835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_15835 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_15835 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_15835 IPR005467 Histidine kinase domain LIS44_15835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_15835 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_15835 IPR013727 Two-component sensor kinase, N-terminal LIS44_15855 IPR000160 GGDEF domain LIS44_15855 IPR029787 Nucleotide cyclase LIS44_15860 IPR010095 Transposase IS605, OrfB, C-terminal LIS44_15860 IPR021027 Transposase, putative, helix-turn-helix domain LIS44_15860 IPR001959 Probable transposase, IS891/IS1136/IS1341 LIS44_15870 IPR035919 EAL domain superfamily LIS44_15870 IPR029787 Nucleotide cyclase LIS44_15870 IPR005330 MHYT domain LIS44_15870 IPR000160 GGDEF domain LIS44_15870 IPR001633 EAL domain LIS44_15890 IPR009057 Homeobox-like domain superfamily LIS44_15890 IPR006118 Recombinase, conserved site LIS44_15890 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily LIS44_15890 IPR006120 Resolvase, HTH domain LIS44_15890 IPR006119 Resolvase, N-terminal catalytic domain LIS44_15915 IPR009057 Homeobox-like domain superfamily LIS44_15915 IPR036397 Ribonuclease H superfamily LIS44_15915 IPR012337 Ribonuclease H-like superfamily LIS44_15915 IPR001584 Integrase, catalytic core LIS44_15940 IPR004291 Transposase, IS66 LIS44_15940 IPR024463 Transposase TnpC, homeodomain LIS44_15940 IPR024474 Zinc-finger binding domain of transposase IS66 LIS44_15940 IPR039552 Transposase IS66, C-terminal LIS44_15940 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_15955 IPR012925 TipAS antibiotic-recognition domain LIS44_15955 IPR009061 Putative DNA-binding domain superfamily LIS44_15955 IPR000551 MerR-type HTH domain LIS44_15955 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain LIS44_15970 IPR006330 Adenosine/adenine deaminase LIS44_15970 IPR032466 Metal-dependent hydrolase LIS44_15970 IPR001365 Adenosine/AMP deaminase domain LIS44_15970 IPR006650 Adenosine/AMP deaminase active site LIS44_15970 IPR028893 Adenosine deaminase LIS44_16015 IPR001789 Signal transduction response regulator, receiver domain LIS44_16015 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_16015 IPR011006 CheY-like superfamily LIS44_16015 IPR016032 Signal transduction response regulator, C-terminal effector LIS44_16015 IPR000792 Transcription regulator LuxR, C-terminal LIS44_16020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_16020 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_16020 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_16020 IPR011006 CheY-like superfamily LIS44_16020 IPR005467 Histidine kinase domain LIS44_16020 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_16020 IPR013656 PAS fold-4 LIS44_16020 IPR000014 PAS domain LIS44_16020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_16020 IPR000700 PAS-associated, C-terminal LIS44_16020 IPR001789 Signal transduction response regulator, receiver domain LIS44_16020 IPR035965 PAS domain superfamily LIS44_16020 IPR001610 PAC motif LIS44_16025 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain LIS44_16025 IPR000891 Pyruvate carboxyltransferase LIS44_16025 IPR013785 Aldolase-type TIM barrel LIS44_16025 IPR017629 4-hydroxy-2-oxovalerate aldolase LIS44_16025 IPR012425 DmpG-like communication LIS44_16030 IPR003361 Acetaldehyde dehydrogenase LIS44_16030 IPR015426 Acetaldehyde dehydrogenase, C-terminal LIS44_16030 IPR036291 NAD(P)-binding domain superfamily LIS44_16030 IPR000534 Semialdehyde dehydrogenase, NAD-binding LIS44_16035 IPR011234 Fumarylacetoacetase-like, C-terminal LIS44_16035 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily LIS44_16040 IPR017626 2,3-dihydroxybiphenyl 1,2-dioxygenase LIS44_16040 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LIS44_16040 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LIS44_16040 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II LIS44_16040 IPR037523 Vicinal oxygen chelate (VOC) domain LIS44_16045 IPR017711 Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase LIS44_16045 IPR036291 NAD(P)-binding domain superfamily LIS44_16045 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_16045 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_16050 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_16050 IPR023753 FAD/NAD(P)-binding domain LIS44_16050 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIS44_16050 IPR028202 Reductase, C-terminal LIS44_16055 IPR017941 Rieske [2Fe-2S] iron-sulphur domain LIS44_16055 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily LIS44_16060 IPR032710 NTF2-like domain superfamily LIS44_16060 IPR000391 Ring-hydroxylating dioxygenase beta subunit LIS44_16070 IPR029058 Alpha/Beta hydrolase fold LIS44_16070 IPR000073 Alpha/beta hydrolase fold-1 LIS44_16070 IPR000639 Epoxide hydrolase-like LIS44_16090 IPR000412 ABC-2 transporter LIS44_16095 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_16095 IPR003593 AAA+ ATPase domain LIS44_16095 IPR003439 ABC transporter-like LIS44_16095 IPR000412 ABC-2 transporter LIS44_16095 IPR017871 ABC transporter, conserved site LIS44_16100 IPR039562 Membrane fusion protein, biotin-lipoyl like domain LIS44_16105 IPR002524 Cation efflux protein LIS44_16105 IPR027470 Cation efflux protein, cytoplasmic domain LIS44_16105 IPR036837 Cation efflux protein, cytoplasmic domain superfamily LIS44_16105 IPR027469 Cation efflux transmembrane domain superfamily LIS44_16110 IPR001633 EAL domain LIS44_16110 IPR035919 EAL domain superfamily LIS44_16110 IPR029787 Nucleotide cyclase LIS44_16110 IPR001610 PAC motif LIS44_16110 IPR000014 PAS domain LIS44_16110 IPR000160 GGDEF domain LIS44_16110 IPR035965 PAS domain superfamily LIS44_16110 IPR013656 PAS fold-4 LIS44_16110 IPR013655 PAS fold-3 LIS44_16110 IPR000700 PAS-associated, C-terminal LIS44_16115 IPR011006 CheY-like superfamily LIS44_16115 IPR000160 GGDEF domain LIS44_16115 IPR001789 Signal transduction response regulator, receiver domain LIS44_16115 IPR029787 Nucleotide cyclase LIS44_16130 IPR025669 AAA domain LIS44_16130 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_16135 IPR036086 ParB/Sulfiredoxin superfamily LIS44_16135 IPR003115 ParB/Sulfiredoxin LIS44_16135 IPR004437 ParB/RepB/Spo0J partition protein LIS44_16135 IPR041468 ParB/Spo0J, HTH domain LIS44_16155 IPR020845 AMP-binding, conserved site LIS44_16155 IPR000873 AMP-dependent synthetase/ligase LIS44_16155 IPR042099 AMP-dependent synthetase-like superfamily LIS44_16160 IPR001959 Probable transposase, IS891/IS1136/IS1341 LIS44_16160 IPR021027 Transposase, putative, helix-turn-helix domain LIS44_16160 IPR010095 Transposase IS605, OrfB, C-terminal LIS44_16170 IPR036291 NAD(P)-binding domain superfamily LIS44_16170 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_16175 IPR036144 RibA-like superfamily LIS44_16175 IPR000926 GTP cyclohydrolase II, RibA LIS44_16175 IPR032677 GTP cyclohydrolase II LIS44_16185 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily LIS44_16185 IPR000531 TonB-dependent receptor-like, beta-barrel LIS44_16185 IPR039423 TonB-dependent receptor-like LIS44_16185 IPR037066 TonB-dependent receptor, plug domain superfamily LIS44_16185 IPR012910 TonB-dependent receptor, plug domain LIS44_16185 IPR010105 TonB-dependent siderophore receptor LIS44_16195 IPR016147 Pili assembly chaperone, N-terminal LIS44_16195 IPR008962 PapD-like superfamily LIS44_16195 IPR036316 Pili assembly chaperone, C-terminal domain superfamily LIS44_16195 IPR001829 Pili assembly chaperone, bacterial LIS44_16195 IPR016148 Pili assembly chaperone, C-terminal LIS44_16195 IPR018046 Pili assembly chaperone, conserved site LIS44_16195 IPR013783 Immunoglobulin-like fold LIS44_16200 IPR000015 Outer membrane usher protein LIS44_16200 IPR018030 Fimbrial membrane usher, conserved site LIS44_16200 IPR037224 PapC, N-terminal domain superfamily LIS44_16200 IPR042186 Outer membrane usher protein FimD, plug domain LIS44_16200 IPR025949 PapC-like, C-terminal domain LIS44_16200 IPR025885 PapC, N-terminal domain LIS44_16210 IPR008962 PapD-like superfamily LIS44_16210 IPR013783 Immunoglobulin-like fold LIS44_16210 IPR016148 Pili assembly chaperone, C-terminal LIS44_16210 IPR016147 Pili assembly chaperone, N-terminal LIS44_16210 IPR018046 Pili assembly chaperone, conserved site LIS44_16210 IPR001829 Pili assembly chaperone, bacterial LIS44_16210 IPR036316 Pili assembly chaperone, C-terminal domain superfamily LIS44_16215 IPR006660 Arsenate reductase-like LIS44_16215 IPR006659 Arsenate reductase LIS44_16215 IPR036249 Thioredoxin-like superfamily LIS44_16220 IPR011991 ArsR-like helix-turn-helix domain LIS44_16220 IPR001845 HTH ArsR-type DNA-binding domain LIS44_16220 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_16220 IPR036390 Winged helix DNA-binding domain superfamily LIS44_16220 IPR018334 ArsR-type transcription regulator, HTH motif LIS44_16235 IPR006015 Universal stress protein A family LIS44_16235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LIS44_16235 IPR006016 UspA LIS44_16240 IPR036390 Winged helix DNA-binding domain superfamily LIS44_16240 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_16240 IPR001845 HTH ArsR-type DNA-binding domain LIS44_16240 IPR018334 ArsR-type transcription regulator, HTH motif LIS44_16240 IPR011991 ArsR-like helix-turn-helix domain LIS44_16250 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 LIS44_16250 IPR004706 Arsenical-resistance protein Acr3 LIS44_16250 IPR038770 Sodium/solute symporter superfamily LIS44_16255 IPR029039 Flavoprotein-like superfamily LIS44_16255 IPR005025 NADPH-dependent FMN reductase-like LIS44_16255 IPR014063 Arsenate resistance ArsH LIS44_16260 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_16260 IPR000960 Flavin monooxygenase FMO LIS44_16335 IPR021027 Transposase, putative, helix-turn-helix domain LIS44_16335 IPR010095 Transposase IS605, OrfB, C-terminal LIS44_16335 IPR001959 Probable transposase, IS891/IS1136/IS1341 LIS44_16355 IPR003607 HD/PDEase domain LIS44_16355 IPR037522 HD-GYP domain LIS44_16360 IPR025161 Putative transposase IS4/IS5 family LIS44_16370 IPR004154 Anticodon-binding LIS44_16370 IPR012947 Threonyl/alanyl tRNA synthetase, SAD LIS44_16370 IPR036621 Anticodon-binding domain superfamily LIS44_16370 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily LIS44_16370 IPR002320 Threonine-tRNA ligase, class IIa LIS44_16370 IPR033728 Threonine-tRNA ligase catalytic core domain LIS44_16370 IPR012676 TGS-like LIS44_16370 IPR004095 TGS LIS44_16370 IPR012675 Beta-grasp domain superfamily LIS44_16370 IPR006195 Aminoacyl-tRNA synthetase, class II LIS44_16370 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) LIS44_16375 IPR006680 Amidohydrolase-related LIS44_16375 IPR004722 Dihydroorotase LIS44_16375 IPR011059 Metal-dependent hydrolase, composite domain superfamily LIS44_16375 IPR032466 Metal-dependent hydrolase LIS44_16375 IPR002195 Dihydroorotase, conserved site LIS44_16380 IPR017156 Carbon dioxide concentrating mechanism protein, CcmM LIS44_16380 IPR000894 Ribulose bisphosphate carboxylase small chain, domain LIS44_16380 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily LIS44_16380 IPR011004 Trimeric LpxA-like superfamily LIS44_16380 IPR001451 Hexapeptide repeat LIS44_16385 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily LIS44_16385 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain LIS44_16385 IPR026660 Phosphoribosyl-AMP cyclohydrolase LIS44_16390 IPR003801 GTP cyclohydrolase FolE2/MptA LIS44_16390 IPR022838 GTP cyclohydrolase FolE2 LIS44_16395 IPR036390 Winged helix DNA-binding domain superfamily LIS44_16395 IPR002481 Ferric-uptake regulator LIS44_16395 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_16410 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LIS44_16410 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LIS44_16410 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_16430 IPR001763 Rhodanese-like domain LIS44_16430 IPR036873 Rhodanese-like domain superfamily LIS44_16430 IPR023695 Thiosulfate sulfurtransferase, bacterial LIS44_16445 IPR002347 Short-chain dehydrogenase/reductase SDR LIS44_16445 IPR020904 Short-chain dehydrogenase/reductase, conserved site LIS44_16445 IPR036291 NAD(P)-binding domain superfamily LIS44_16470 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIS44_16470 IPR029021 Protein-tyrosine phosphatase-like LIS44_16470 IPR001279 Metallo-beta-lactamase LIS44_16470 IPR005939 Beta-lactamase hydrolase-like LIS44_16485 IPR002585 Cytochrome ubiquinol oxidase subunit 1 LIS44_16490 IPR003317 Cytochrome ubiquinol oxidase subunit 2 LIS44_16500 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LIS44_16500 IPR006311 Twin-arginine translocation pathway, signal sequence LIS44_16500 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily LIS44_16500 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding LIS44_16500 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily LIS44_16500 IPR023753 FAD/NAD(P)-binding domain LIS44_16500 IPR036188 FAD/NAD(P)-binding domain superfamily LIS44_16525 IPR002033 Sec-independent periplasmic protein translocase TatC LIS44_16525 IPR019820 Sec-independent periplasmic protein translocase, conserved site LIS44_16530 IPR018448 Twin-arginine translocation protein TatB LIS44_16530 IPR003369 Sec-independent protein translocase protein TatA/B/E LIS44_16535 IPR003369 Sec-independent protein translocase protein TatA/B/E LIS44_16535 IPR006312 Sec-independent protein translocase protein TatA/E LIS44_16545 IPR013766 Thioredoxin domain LIS44_16545 IPR036249 Thioredoxin-like superfamily LIS44_16545 IPR022915 Peroxiredoxin, TDXH subfamily LIS44_16545 IPR019479 Peroxiredoxin, C-terminal LIS44_16545 IPR024706 Peroxiredoxin, AhpC-type LIS44_16545 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant LIS44_16550 IPR023695 Thiosulfate sulfurtransferase, bacterial LIS44_16550 IPR036873 Rhodanese-like domain superfamily LIS44_16550 IPR001763 Rhodanese-like domain LIS44_16565 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_16565 IPR011924 Lipoprotein releasing system, ATP-binding protein LIS44_16565 IPR017871 ABC transporter, conserved site LIS44_16565 IPR003439 ABC transporter-like LIS44_16565 IPR003593 AAA+ ATPase domain LIS44_16565 IPR015854 ABC transporter, lipoprotein release, LolD LIS44_16575 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG LIS44_16575 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LIS44_16585 IPR005265 Protoporphyrinogen oxidase HemJ-like LIS44_16655 IPR006143 RND efflux pump, membrane fusion protein LIS44_16655 IPR022824 Multidrug resistance protein MdtA LIS44_16655 IPR039562 Membrane fusion protein, biotin-lipoyl like domain LIS44_16660 IPR001036 Acriflavin resistance protein LIS44_16660 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LIS44_16660 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA LIS44_16675 IPR001867 OmpR/PhoB-type DNA-binding domain LIS44_16675 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_16675 IPR039420 Transcriptional regulatory protein WalR-like LIS44_16675 IPR001789 Signal transduction response regulator, receiver domain LIS44_16675 IPR011006 CheY-like superfamily LIS44_16680 IPR003594 Histidine kinase/HSP90-like ATPase LIS44_16680 IPR005467 Histidine kinase domain LIS44_16680 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain LIS44_16680 IPR003660 HAMP domain LIS44_16680 IPR013727 Two-component sensor kinase, N-terminal LIS44_16680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily LIS44_16680 IPR004358 Signal transduction histidine kinase-related protein, C-terminal LIS44_16680 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily LIS44_16685 IPR023188 DNA-binding protein Dps, conserved site LIS44_16685 IPR012347 Ferritin-like LIS44_16685 IPR009078 Ferritin-like superfamily LIS44_16685 IPR002177 DNA-binding protein Dps LIS44_16685 IPR008331 Ferritin/DPS protein domain LIS44_16715 IPR011991 ArsR-like helix-turn-helix domain LIS44_16715 IPR001845 HTH ArsR-type DNA-binding domain LIS44_16715 IPR036388 Winged helix-like DNA-binding domain superfamily LIS44_16715 IPR036390 Winged helix DNA-binding domain superfamily LIS44_16720 IPR007272 Sulphur transport domain LIS44_16730 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like LIS44_16730 IPR001279 Metallo-beta-lactamase LIS44_16735 IPR002781 Transmembrane protein TauE-like LIS44_16770 IPR039562 Membrane fusion protein, biotin-lipoyl like domain LIS44_16775 IPR003593 AAA+ ATPase domain LIS44_16775 IPR000412 ABC-2 transporter LIS44_16775 IPR003439 ABC transporter-like LIS44_16775 IPR017871 ABC transporter, conserved site LIS44_16775 IPR027417 P-loop containing nucleoside triphosphate hydrolase LIS44_16780 IPR000412 ABC-2 transporter LIS44_16835 IPR002589 Macro domain