locus-tag class description FK537_00075 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FK537_00100 PF01425 Amidase FK537_00120 PF00437 Type II/IV secretion system protein FK537_00125 PF03743 Bacterial conjugation TrbI-like protein FK537_00155 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FK537_00160 PF05101 Type IV secretory pathway, VirB3-like protein FK537_00175 PF01396 Topoisomerase DNA binding C4 zinc finger FK537_00175 PF01131 DNA topoisomerase FK537_00175 PF01751 Toprim domain FK537_00230 PF13614 AAA domain FK537_00235 PF02195 ParB-like nuclease domain FK537_00235 PF06613 KorB C-terminal beta-barrel domain FK537_00235 PF08535 KorB domain FK537_00265 PF00589 Phage integrase family FK537_00265 PF13495 Phage integrase, N-terminal SAM-like domain FK537_00270 PF01494 FAD binding domain FK537_00285 PF00239 Resolvase, N terminal domain FK537_00285 PF02796 Helix-turn-helix domain of resolvase FK537_00300 PF04851 Type III restriction enzyme, res subunit FK537_00305 PF01555 DNA methylase FK537_00500 PF10431 C-terminal, D2-small domain, of ClpB protein FK537_00500 PF17871 AAA lid domain FK537_00500 PF07724 AAA domain (Cdc48 subfamily) FK537_00500 PF00004 ATPase family associated with various cellular activities (AAA) FK537_00530 PF12697 Alpha/beta hydrolase family FK537_00535 PF00753 Metallo-beta-lactamase superfamily FK537_00545 PF04143 Sulphur transport FK537_00560 PF01220 Dehydroquinase class II FK537_00565 PF00364 Biotin-requiring enzyme FK537_00570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FK537_00570 PF02785 Biotin carboxylase C-terminal domain FK537_00570 PF00289 Biotin carboxylase, N-terminal domain FK537_00580 PF01425 Amidase FK537_00585 PF12832 MFS_1 like family FK537_00620 PF00994 Probable molybdopterin binding domain FK537_00620 PF02464 Competence-damaged protein FK537_00630 PF00285 Citrate synthase, C-terminal domain FK537_00640 PF00440 Bacterial regulatory proteins, tetR family FK537_00645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FK537_00645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FK537_00650 PF00083 Sugar (and other) transporter FK537_00660 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FK537_00665 PF10431 C-terminal, D2-small domain, of ClpB protein FK537_00665 PF17871 AAA lid domain FK537_00665 PF00004 ATPase family associated with various cellular activities (AAA) FK537_00665 PF07724 AAA domain (Cdc48 subfamily) FK537_00665 PF02861 Clp amino terminal domain, pathogenicity island component FK537_00670 PF02617 ATP-dependent Clp protease adaptor protein ClpS FK537_00680 PF01118 Semialdehyde dehydrogenase, NAD binding domain FK537_00680 PF02774 Semialdehyde dehydrogenase, dimerisation domain FK537_00690 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FK537_00695 PF00291 Pyridoxal-phosphate dependent enzyme FK537_00695 PF00585 C-terminal regulatory domain of Threonine dehydratase FK537_00700 PF02080 TrkA-C domain FK537_00700 PF02254 TrkA-N domain FK537_00705 PF02386 Cation transport protein FK537_00710 PF02253 Phospholipase A1 FK537_00715 PF00675 Insulinase (Peptidase family M16) FK537_00715 PF08367 Peptidase M16C associated FK537_00715 PF05193 Peptidase M16 inactive domain FK537_00725 PF00294 pfkB family carbohydrate kinase FK537_00735 PF07290 Protein of unknown function (DUF1449) FK537_00745 PF01654 Cytochrome bd terminal oxidase subunit I FK537_00750 PF02322 Cytochrome bd terminal oxidase subunit II FK537_00755 PF08173 Membrane bound YbgT-like protein FK537_00765 PF01264 Chorismate synthase FK537_00770 PF05175 Methyltransferase small domain FK537_00785 PF03109 ABC1 family FK537_00790 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_00790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_00790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_00795 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_00795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_00795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_00800 PF00583 Acetyltransferase (GNAT) family FK537_00805 PF00487 Fatty acid desaturase FK537_00810 PF12852 Cupin FK537_00810 PF12833 Helix-turn-helix domain FK537_00815 PF02684 Lipid-A-disaccharide synthetase FK537_00820 PF01925 Sulfite exporter TauE/SafE FK537_00825 PF00793 DAHP synthetase I family FK537_00835 PF02542 YgbB family FK537_00850 PF01266 FAD dependent oxidoreductase FK537_00855 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FK537_00855 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_00860 PF07977 FabA-like domain FK537_00865 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FK537_00865 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_00875 PF07244 Surface antigen variable number repeat FK537_00875 PF01103 Surface antigen FK537_00880 PF02163 Peptidase family M50 FK537_00880 PF17820 PDZ domain FK537_00880 PF13180 PDZ domain FK537_00885 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FK537_00885 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FK537_00885 PF13288 DXP reductoisomerase C-terminal domain FK537_00895 PF01255 Putative undecaprenyl diphosphate synthase FK537_00900 PF01765 Ribosome recycling factor FK537_00905 PF00696 Amino acid kinase family FK537_00910 PF18693 TRAM domain FK537_00910 PF04055 Radical SAM superfamily FK537_00910 PF00919 Uncharacterized protein family UPF0004 FK537_00915 PF00512 His Kinase A (phospho-acceptor) domain FK537_00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_00915 PF00989 PAS fold FK537_00920 PF00158 Sigma-54 interaction domain FK537_00920 PF00072 Response regulator receiver domain FK537_00920 PF02954 Bacterial regulatory protein, Fis family FK537_00930 PF03466 LysR substrate binding domain FK537_00930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_00935 PF00557 Metallopeptidase family M24 FK537_00940 PF05525 Branched-chain amino acid transport protein FK537_00960 PF01609 Transposase DDE domain FK537_00960 PF13006 Insertion element 4 transposase N-terminal FK537_00965 PF03471 Transporter associated domain FK537_00965 PF03741 Integral membrane protein TerC family FK537_00980 PF00171 Aldehyde dehydrogenase family FK537_00985 PF01274 Malate synthase FK537_00990 PF03969 AFG1-like ATPase FK537_01000 PF00743 Flavin-binding monooxygenase-like FK537_01005 PF03956 Lysine exporter LysO FK537_01010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FK537_01020 PF00216 Bacterial DNA-binding protein FK537_01025 PF00575 S1 RNA binding domain FK537_01030 PF02224 Cytidylate kinase FK537_01040 PF14437 MafB19-like deaminase FK537_01050 PF03167 Uracil DNA glycosylase superfamily FK537_01060 PF03934 Type II secretion system (T2SS), protein K FK537_01065 PF07963 Prokaryotic N-terminal methylation motif FK537_01065 PF11612 Type II secretion system (T2SS), protein J FK537_01070 PF02501 Type II secretion system (T2SS), protein I FK537_01070 PF07963 Prokaryotic N-terminal methylation motif FK537_01075 PF07963 Prokaryotic N-terminal methylation motif FK537_01085 PF01026 TatD related DNase FK537_01095 PF09115 DNA polymerase III, delta subunit, C terminal FK537_01100 PF02348 Cytidylyltransferase FK537_01105 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FK537_01110 PF00664 ABC transporter transmembrane region FK537_01110 PF00005 ABC transporter FK537_01120 PF01618 MotA/TolQ/ExbB proton channel family FK537_01125 PF17762 HTH domain found in ParB protein FK537_01125 PF02195 ParB-like nuclease domain FK537_01130 PF13614 AAA domain FK537_01135 PF02527 rRNA small subunit methyltransferase G FK537_01140 PF00483 Nucleotidyl transferase FK537_01145 PF01636 Phosphotransferase enzyme family FK537_01150 PF04453 LPS transport system D FK537_01150 PF03968 OstA-like protein FK537_01155 PF09312 SurA N-terminal domain FK537_01155 PF00639 PPIC-type PPIASE domain FK537_01160 PF17209 Hfq protein FK537_01170 PF08676 MutL C terminal dimerisation domain FK537_01170 PF01119 DNA mismatch repair protein, C-terminal domain FK537_01175 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FK537_01180 PF00849 RNA pseudouridylate synthase FK537_01180 PF01479 S4 domain FK537_01195 PF00849 RNA pseudouridylate synthase FK537_01195 PF01479 S4 domain FK537_01200 PF04284 Protein of unknown function (DUF441) FK537_01210 PF03466 LysR substrate binding domain FK537_01210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_01215 PF05970 PIF1-like helicase FK537_01215 PF14493 Helix-turn-helix domain FK537_01225 PF00465 Iron-containing alcohol dehydrogenase FK537_01240 PF00171 Aldehyde dehydrogenase family FK537_01245 PF00958 GMP synthase C terminal domain FK537_01245 PF02540 NAD synthase FK537_01245 PF00117 Glutamine amidotransferase class-I FK537_01250 PF04264 YceI-like domain FK537_01260 PF00456 Transketolase, thiamine diphosphate binding domain FK537_01260 PF02779 Transketolase, pyrimidine binding domain FK537_01260 PF02780 Transketolase, C-terminal domain FK537_01265 PF00438 S-adenosylmethionine synthetase, N-terminal domain FK537_01265 PF02773 S-adenosylmethionine synthetase, C-terminal domain FK537_01265 PF02772 S-adenosylmethionine synthetase, central domain FK537_01270 PF08803 Putative mono-oxygenase ydhR FK537_01285 PF01810 LysE type translocator FK537_01300 PF02075 Crossover junction endodeoxyribonuclease RuvC FK537_01305 PF00708 Acylphosphatase FK537_01310 PF01256 Carbohydrate kinase FK537_01310 PF03853 YjeF-related protein N-terminus FK537_01315 PF08331 Domain of unknown function (DUF1730) FK537_01325 PF06968 Biotin and Thiamin Synthesis associated domain FK537_01325 PF04055 Radical SAM superfamily FK537_01335 PF00501 AMP-binding enzyme FK537_01335 PF13193 AMP-binding enzyme C-terminal domain FK537_01340 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_01345 PF08223 PaaX-like protein C-terminal domain FK537_01345 PF07848 PaaX-like protein FK537_01350 PF14535 AMP-binding enzyme C-terminal domain FK537_01350 PF00501 AMP-binding enzyme FK537_01355 PF02803 Thiolase, C-terminal domain FK537_01355 PF00108 Thiolase, N-terminal domain FK537_01360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FK537_01360 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FK537_01360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FK537_01365 PF00378 Enoyl-CoA hydratase/isomerase FK537_01370 PF00378 Enoyl-CoA hydratase/isomerase FK537_01375 PF00175 Oxidoreductase NAD-binding domain FK537_01375 PF00111 2Fe-2S iron-sulfur cluster binding domain FK537_01375 PF00970 Oxidoreductase FAD-binding domain FK537_01380 PF01883 Iron-sulfur cluster assembly protein FK537_01385 PF05138 Phenylacetic acid catabolic protein FK537_01390 PF06243 Phenylacetic acid degradation B FK537_01395 PF05138 Phenylacetic acid catabolic protein FK537_01400 PF00171 Aldehyde dehydrogenase family FK537_01400 PF01575 MaoC like domain FK537_01405 PF07690 Major Facilitator Superfamily FK537_01410 PF00210 Ferritin-like domain FK537_01425 PF00990 Diguanylate cyclase, GGDEF domain FK537_01425 PF08448 PAS fold FK537_01425 PF00563 EAL domain FK537_01435 PF02333 Phytase FK537_01440 PF01618 MotA/TolQ/ExbB proton channel family FK537_01445 PF02472 Biopolymer transport protein ExbD/TolR FK537_01455 PF07715 TonB-dependent Receptor Plug Domain FK537_01455 PF00593 TonB dependent receptor FK537_01490 PF00925 GTP cyclohydrolase II FK537_01495 PF00290 Tryptophan synthase alpha chain FK537_01500 PF00291 Pyridoxal-phosphate dependent enzyme FK537_01505 PF03466 LysR substrate binding domain FK537_01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_01520 PF00072 Response regulator receiver domain FK537_01520 PF00486 Transcriptional regulatory protein, C terminal FK537_01525 PF08521 Two-component sensor kinase N-terminal FK537_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_01525 PF00512 His Kinase A (phospho-acceptor) domain FK537_01565 PF00293 NUDIX domain FK537_01565 PF09297 NADH pyrophosphatase zinc ribbon domain FK537_01570 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FK537_01585 PF00576 HIUase/Transthyretin family FK537_01595 PF13737 Transposase DDE domain FK537_01600 PF00486 Transcriptional regulatory protein, C terminal FK537_01600 PF00072 Response regulator receiver domain FK537_01605 PF00665 Integrase core domain FK537_01605 PF02796 Helix-turn-helix domain of resolvase FK537_01610 PF01695 IstB-like ATP binding protein FK537_01615 PF00512 His Kinase A (phospho-acceptor) domain FK537_01615 PF00672 HAMP domain FK537_01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_01620 PF00005 ABC transporter FK537_01625 PF02687 FtsX-like permease family FK537_01625 PF12704 MacB-like periplasmic core domain FK537_01630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FK537_01650 PF02801 Beta-ketoacyl synthase, C-terminal domain FK537_01650 PF00109 Beta-ketoacyl synthase, N-terminal domain FK537_01665 PF00109 Beta-ketoacyl synthase, N-terminal domain FK537_01665 PF02801 Beta-ketoacyl synthase, C-terminal domain FK537_01675 PF04820 Tryptophan halogenase FK537_01695 PF00221 Aromatic amino acid lyase FK537_01705 PF00535 Glycosyl transferase family 2 FK537_01705 PF00795 Carbon-nitrogen hydrolase FK537_01710 PF07977 FabA-like domain FK537_01720 PF00550 Phosphopantetheine attachment site FK537_01725 PF00550 Phosphopantetheine attachment site FK537_01800 PF00873 AcrB/AcrD/AcrF family FK537_01805 PF00529 HlyD membrane-fusion protein of T1SS FK537_01805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FK537_01820 PF01545 Cation efflux family FK537_01835 PF13356 Arm DNA-binding domain FK537_01835 PF00589 Phage integrase family FK537_01875 PF00005 ABC transporter FK537_01895 PF00092 von Willebrand factor type A domain FK537_01940 PF11867 Domain of unknown function (DUF3387) FK537_01940 PF18766 SWI2/SNF2 ATPase FK537_01940 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FK537_01965 PF02384 N-6 DNA Methylase FK537_01965 PF12161 HsdM N-terminal domain FK537_01995 PF09313 Domain of unknown function (DUF1971) FK537_01995 PF03848 Tellurite resistance protein TehB FK537_02075 PF01553 Acyltransferase FK537_02080 PF01709 Transcriptional regulator FK537_02100 PF01926 50S ribosome-binding GTPase FK537_02100 PF06071 Protein of unknown function (DUF933) FK537_02110 PF03591 AzlC protein FK537_02115 PF05437 Branched-chain amino acid transport protein (AzlD) FK537_02120 PF02222 ATP-grasp domain FK537_02125 PF01909 Nucleotidyltransferase domain FK537_02125 PF01966 HD domain FK537_02125 PF08335 GlnD PII-uridylyltransferase FK537_02130 PF00155 Aminotransferase class I and II FK537_02135 PF00255 Glutathione peroxidase FK537_02140 PF01641 SelR domain FK537_02145 PF00155 Aminotransferase class I and II FK537_02150 PF01757 Acyltransferase family FK537_02155 PF00753 Metallo-beta-lactamase superfamily FK537_02155 PF16123 Hydroxyacylglutathione hydrolase C-terminus FK537_02190 PF00069 Protein kinase domain FK537_02190 PF03793 PASTA domain FK537_02220 PF00814 Glycoprotease family FK537_02225 PF01165 Ribosomal protein S21 FK537_02230 PF09424 Yqey-like protein FK537_02245 PF01435 Peptidase family M48 FK537_02250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FK537_02250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FK537_02265 PF00156 Phosphoribosyl transferase domain FK537_02275 PF01180 Dihydroorotate dehydrogenase FK537_02295 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FK537_02295 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FK537_02310 PF00270 DEAD/DEAH box helicase FK537_02310 PF00271 Helicase conserved C-terminal domain FK537_02315 PF00313 'Cold-shock' DNA-binding domain FK537_02325 PF04542 Sigma-70 region 2 FK537_02325 PF04545 Sigma-70, region 4 FK537_02325 PF00140 Sigma-70 factor, region 1.2 FK537_02330 PF04241 Protein of unknown function (DUF423) FK537_02340 PF05690 Thiazole biosynthesis protein ThiG FK537_02345 PF00043 Glutathione S-transferase, C-terminal domain FK537_02345 PF02798 Glutathione S-transferase, N-terminal domain FK537_02350 PF01740 STAS domain FK537_02350 PF00916 Sulfate permease family FK537_02360 PF02390 Putative methyltransferase FK537_02380 PF13193 AMP-binding enzyme C-terminal domain FK537_02380 PF00501 AMP-binding enzyme FK537_02385 PF17925 Tetracyclin repressor-like, C-terminal domain FK537_02385 PF00440 Bacterial regulatory proteins, tetR family FK537_02390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_02390 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_02390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_02395 PF01039 Carboxyl transferase domain FK537_02400 PF00378 Enoyl-CoA hydratase/isomerase FK537_02405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FK537_02405 PF00289 Biotin carboxylase, N-terminal domain FK537_02405 PF18140 Propionyl-coenzyme A carboxylase BT domain FK537_02405 PF02785 Biotin carboxylase C-terminal domain FK537_02405 PF00364 Biotin-requiring enzyme FK537_02410 PF00682 HMGL-like FK537_02415 PF01144 Coenzyme A transferase FK537_02420 PF01144 Coenzyme A transferase FK537_02425 PF00691 OmpA family FK537_02425 PF05736 OprF membrane domain FK537_02430 PF01979 Amidohydrolase family FK537_02435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FK537_02435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FK537_02445 PF01170 Putative RNA methylase family UPF0020 FK537_02445 PF02926 THUMP domain FK537_02445 PF10672 S-adenosylmethionine-dependent methyltransferase FK537_02455 PF00004 ATPase family associated with various cellular activities (AAA) FK537_02455 PF10431 C-terminal, D2-small domain, of ClpB protein FK537_02455 PF02861 Clp amino terminal domain, pathogenicity island component FK537_02455 PF07724 AAA domain (Cdc48 subfamily) FK537_02455 PF17871 AAA lid domain FK537_02460 PF02566 OsmC-like protein FK537_02465 PF00027 Cyclic nucleotide-binding domain FK537_02465 PF13545 Crp-like helix-turn-helix domain FK537_02470 PF00248 Aldo/keto reductase family FK537_02485 PF01435 Peptidase family M48 FK537_02490 PF00709 Adenylosuccinate synthetase FK537_02495 PF13393 Histidyl-tRNA synthetase FK537_02505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FK537_02505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FK537_02510 PF02272 DHHA1 domain FK537_02510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FK537_02510 PF01411 tRNA synthetases class II (A) FK537_02515 PF01842 ACT domain FK537_02515 PF13840 ACT domain FK537_02515 PF00696 Amino acid kinase family FK537_02520 PF02599 Global regulator protein family FK537_02525 PF01351 Ribonuclease HII FK537_02545 PF00962 Adenosine/AMP deaminase FK537_02550 PF00860 Permease family FK537_02570 PF13559 Domain of unknown function (DUF4129) FK537_02570 PF11992 Domain of unknown function (DUF3488) FK537_02570 PF01841 Transglutaminase-like superfamily FK537_02580 PF07726 ATPase family associated with various cellular activities (AAA) FK537_02580 PF17863 AAA lid domain FK537_02585 PF04328 Selenoprotein, putative FK537_02590 PF13722 5TM C-terminal transporter carbon starvation CstA FK537_02590 PF02554 Carbon starvation protein CstA FK537_02595 PF01132 Elongation factor P (EF-P) OB domain FK537_02595 PF08207 Elongation factor P (EF-P) KOW-like domain FK537_02595 PF09285 Elongation factor P, C-terminal FK537_02600 PF04055 Radical SAM superfamily FK537_02615 PF01197 Ribosomal protein L31 FK537_02620 PF13593 SBF-like CPA transporter family (DUF4137) FK537_02625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FK537_02630 PF07690 Major Facilitator Superfamily FK537_02635 PF13654 AAA domain FK537_02635 PF05362 Lon protease (S16) C-terminal proteolytic domain FK537_02640 PF00462 Glutaredoxin FK537_02645 PF00202 Aminotransferase class-III FK537_02650 PF03466 LysR substrate binding domain FK537_02650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_02655 PF01551 Peptidase family M23 FK537_02655 PF01476 LysM domain FK537_02660 PF01975 Survival protein SurE FK537_02675 PF07943 Penicillin-binding protein 5, C-terminal domain FK537_02675 PF00768 D-alanyl-D-alanine carboxypeptidase FK537_02680 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_02710 PF00293 NUDIX domain FK537_02720 PF04356 Protein of unknown function (DUF489) FK537_02725 PF00206 Lyase FK537_02725 PF08328 Adenylosuccinate lyase C-terminal FK537_02735 PF08496 Peptidase family S49 N-terminal FK537_02735 PF01343 Peptidase family S49 FK537_02740 PF00005 ABC transporter FK537_02745 PF00528 Binding-protein-dependent transport system inner membrane component FK537_02750 PF00528 Binding-protein-dependent transport system inner membrane component FK537_02760 PF00282 Pyridoxal-dependent decarboxylase conserved domain FK537_02765 PF00202 Aminotransferase class-III FK537_02775 PF01472 PUA domain FK537_02775 PF00696 Amino acid kinase family FK537_02780 PF01018 GTP1/OBG FK537_02780 PF01926 50S ribosome-binding GTPase FK537_02785 PF07690 Major Facilitator Superfamily FK537_02790 PF01638 HxlR-like helix-turn-helix FK537_02795 PF05368 NmrA-like family FK537_02810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FK537_02810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FK537_02815 PF00892 EamA-like transporter family FK537_02825 PF17757 UvrB interaction domain FK537_02825 PF04851 Type III restriction enzyme, res subunit FK537_02825 PF00271 Helicase conserved C-terminal domain FK537_02825 PF12344 Ultra-violet resistance protein B FK537_02825 PF02151 UvrB/uvrC motif FK537_02845 PF00155 Aminotransferase class I and II FK537_02865 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FK537_02870 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FK537_02875 PF02565 Recombination protein O C terminal FK537_02875 PF11967 Recombination protein O N terminal FK537_02885 PF01926 50S ribosome-binding GTPase FK537_02885 PF07650 KH domain FK537_02890 PF14622 Ribonuclease-III-like FK537_02890 PF00035 Double-stranded RNA binding motif FK537_02900 PF10502 Signal peptidase, peptidase S26 FK537_02905 PF00679 Elongation factor G C-terminus FK537_02905 PF06421 GTP-binding protein LepA C-terminus FK537_02905 PF00009 Elongation factor Tu GTP binding domain FK537_02905 PF03144 Elongation factor Tu domain 2 FK537_02915 PF13180 PDZ domain FK537_02920 PF02910 Fumarate reductase flavoprotein C-term FK537_02920 PF00890 FAD binding domain FK537_02925 PF13419 Haloacid dehalogenase-like hydrolase FK537_02935 PF02223 Thymidylate kinase FK537_02940 PF02618 YceG-like family FK537_02960 PF00528 Binding-protein-dependent transport system inner membrane component FK537_02965 PF00528 Binding-protein-dependent transport system inner membrane component FK537_02970 PF00005 ABC transporter FK537_02970 PF12857 TOBE-like domain FK537_02975 PF03466 LysR substrate binding domain FK537_02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_02990 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FK537_02990 PF14602 Hexapeptide repeat of succinyl-transferase FK537_02990 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_02995 PF04055 Radical SAM superfamily FK537_03000 PF06508 Queuosine biosynthesis protein QueC FK537_03010 PF00578 AhpC/TSA family FK537_03015 PF04264 YceI-like domain FK537_03020 PF01467 Cytidylyltransferase-like FK537_03020 PF00293 NUDIX domain FK537_03025 PF00378 Enoyl-CoA hydratase/isomerase FK537_03030 PF00881 Nitroreductase family FK537_03045 PF02769 AIR synthase related protein, C-terminal domain FK537_03045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FK537_03045 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FK537_03055 PF13737 Transposase DDE domain FK537_03060 PF02342 TerD domain FK537_03070 PF02342 TerD domain FK537_03075 PF02342 TerD domain FK537_03085 PF02342 TerD domain FK537_03100 PF11202 Phosphoribosyl transferase (PRTase) FK537_03100 PF15608 PELOTA RNA binding domain FK537_03120 PF01966 HD domain FK537_03125 PF07499 RuvA, C-terminal domain FK537_03125 PF01330 RuvA N terminal domain FK537_03130 PF17864 RuvB AAA lid domain FK537_03130 PF05496 Holliday junction DNA helicase RuvB P-loop domain FK537_03130 PF05491 RuvB C-terminal winged helix domain FK537_03140 PF03061 Thioesterase superfamily FK537_03145 PF01618 MotA/TolQ/ExbB proton channel family FK537_03150 PF02472 Biopolymer transport protein ExbD/TolR FK537_03160 PF07676 WD40-like Beta Propeller Repeat FK537_03160 PF04052 TolB amino-terminal domain FK537_03165 PF00691 OmpA family FK537_03175 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FK537_03180 PF08032 RNA 2'-O ribose methyltransferase substrate binding FK537_03180 PF00588 SpoU rRNA Methylase family FK537_03210 PF00308 Bacterial dnaA protein FK537_03210 PF11638 DnaA N-terminal domain FK537_03210 PF08299 Bacterial dnaA protein helix-turn-helix FK537_03215 PF01594 AI-2E family transporter FK537_03220 PF02769 AIR synthase related protein, C-terminal domain FK537_03220 PF00586 AIR synthase related protein, N-terminal domain FK537_03225 PF00551 Formyl transferase FK537_03235 PF01343 Peptidase family S49 FK537_03235 PF06965 Na+/H+ antiporter 1 FK537_03245 PF03772 Competence protein FK537_03245 PF13567 Domain of unknown function (DUF4131) FK537_03245 PF00753 Metallo-beta-lactamase superfamily FK537_03250 PF00005 ABC transporter FK537_03255 PF02687 FtsX-like permease family FK537_03255 PF12704 MacB-like periplasmic core domain FK537_03270 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FK537_03280 PF00266 Aminotransferase class-V FK537_03295 PF00521 DNA gyrase/topoisomerase IV, subunit A FK537_03295 PF03989 DNA gyrase C-terminal domain, beta-propeller FK537_03305 PF01012 Electron transfer flavoprotein domain FK537_03305 PF00766 Electron transfer flavoprotein FAD-binding domain FK537_03310 PF01012 Electron transfer flavoprotein domain FK537_03315 PF01810 LysE type translocator FK537_03320 PF01037 Lrp/AsnC ligand binding domain FK537_03330 PF02899 Phage integrase, N-terminal SAM-like domain FK537_03330 PF00589 Phage integrase family FK537_03335 PF00561 alpha/beta hydrolase fold FK537_03340 PF01678 Diaminopimelate epimerase FK537_03345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FK537_03345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FK537_03355 PF00324 Amino acid permease FK537_03360 PF01235 Sodium:alanine symporter family FK537_03365 PF18073 Rubredoxin metal binding domain FK537_03375 PF13180 PDZ domain FK537_03375 PF17820 PDZ domain FK537_03380 PF01784 NIF3 (NGG1p interacting factor 3) FK537_03385 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FK537_03385 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FK537_03415 PF01494 FAD binding domain FK537_03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_03420 PF03466 LysR substrate binding domain FK537_03430 PF01040 UbiA prenyltransferase family FK537_03435 PF04345 Chorismate lyase FK537_03440 PF03951 Glutamine synthetase, beta-Grasp domain FK537_03440 PF00120 Glutamine synthetase, catalytic domain FK537_03445 PF00117 Glutamine amidotransferase class-I FK537_03450 PF00591 Glycosyl transferase family, a/b domain FK537_03450 PF02885 Glycosyl transferase family, helical bundle domain FK537_03455 PF00218 Indole-3-glycerol phosphate synthase FK537_03475 PF00990 Diguanylate cyclase, GGDEF domain FK537_03490 PF05675 Protein of unknown function (DUF817) FK537_03495 PF01208 Uroporphyrinogen decarboxylase (URO-D) FK537_03505 PF17954 Quercetinase C-terminal cupin domain FK537_03505 PF02678 Pirin FK537_03510 PF00005 ABC transporter FK537_03535 PF03449 Transcription elongation factor, N-terminal FK537_03535 PF01272 Transcription elongation factor, GreA/GreB, C-term FK537_03540 PF01464 Transglycosylase SLT domain FK537_03540 PF00497 Bacterial extracellular solute-binding proteins, family 3 FK537_03550 PF01171 PP-loop family FK537_03555 PF01464 Transglycosylase SLT domain FK537_03555 PF01551 Peptidase family M23 FK537_03555 PF10145 Phage-related minor tail protein FK537_03560 PF01435 Peptidase family M48 FK537_03570 PF01769 Divalent cation transporter FK537_03570 PF00571 CBS domain FK537_03570 PF03448 MgtE intracellular N domain FK537_03575 PF00873 AcrB/AcrD/AcrF family FK537_03590 PF00118 TCP-1/cpn60 chaperonin family FK537_03595 PF00166 Chaperonin 10 Kd subunit FK537_03605 PF00781 Diacylglycerol kinase catalytic domain FK537_03610 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain FK537_03610 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain FK537_03625 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FK537_03625 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FK537_03645 PF16655 PhoD-like phosphatase, N-terminal domain FK537_03645 PF09423 PhoD-like phosphatase FK537_03660 PF00809 Pterin binding enzyme FK537_03670 PF06480 FtsH Extracellular FK537_03670 PF00004 ATPase family associated with various cellular activities (AAA) FK537_03670 PF17862 AAA+ lid domain FK537_03670 PF01434 Peptidase family M41 FK537_03675 PF01728 FtsJ-like methyltransferase FK537_03680 PF01985 CRS1 / YhbY (CRM) domain FK537_03695 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FK537_03695 PF00117 Glutamine amidotransferase class-I FK537_03700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FK537_03700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FK537_03700 PF02142 MGS-like domain FK537_03705 PF01272 Transcription elongation factor, GreA/GreB, C-term FK537_03705 PF03449 Transcription elongation factor, N-terminal FK537_03710 PF00440 Bacterial regulatory proteins, tetR family FK537_03715 PF01042 Endoribonuclease L-PSP FK537_03720 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_03725 PF00582 Universal stress protein family FK537_03730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FK537_03735 PF04228 Putative neutral zinc metallopeptidase FK537_03740 PF05661 Protein of unknown function (DUF808) FK537_03745 PF00579 tRNA synthetases class I (W and Y) FK537_03755 PF15975 Flotillin FK537_03755 PF01145 SPFH domain / Band 7 family FK537_03760 PF13994 PgaD-like protein FK537_03765 PF00535 Glycosyl transferase family 2 FK537_03770 PF14883 Hypothetical glycosyl hydrolase family 13 FK537_03770 PF01522 Polysaccharide deacetylase FK537_03780 PF02629 CoA binding domain FK537_03780 PF00549 CoA-ligase FK537_03785 PF08442 ATP-grasp domain FK537_03785 PF00549 CoA-ligase FK537_03790 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_03790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FK537_03795 PF00364 Biotin-requiring enzyme FK537_03795 PF02817 e3 binding domain FK537_03795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FK537_03800 PF16870 2-oxoglutarate dehydrogenase C-terminal FK537_03800 PF00676 Dehydrogenase E1 component FK537_03800 PF16078 2-oxoglutarate dehydrogenase N-terminus FK537_03800 PF02779 Transketolase, pyrimidine binding domain FK537_03805 PF13085 2Fe-2S iron-sulfur cluster binding domain FK537_03810 PF00890 FAD binding domain FK537_03810 PF02910 Fumarate reductase flavoprotein C-term FK537_03815 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FK537_03820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FK537_03825 PF00285 Citrate synthase, C-terminal domain FK537_03845 PF05762 VWA domain containing CoxE-like protein FK537_03850 PF17868 AAA lid domain FK537_03850 PF12592 Protein of unknown function (DUF3763) FK537_03850 PF07728 AAA domain (dynein-related subfamily) FK537_03860 PF00795 Carbon-nitrogen hydrolase FK537_03860 PF02540 NAD synthase FK537_03890 PF00037 4Fe-4S binding domain FK537_03895 PF01467 Cytidylyltransferase-like FK537_03900 PF01668 SmpB protein FK537_03930 PF01479 S4 domain FK537_03930 PF00849 RNA pseudouridylate synthase FK537_03935 PF13525 Outer membrane lipoprotein FK537_03940 PF10410 DnaB-helicase binding domain of primase FK537_03940 PF08275 DNA primase catalytic core, N-terminal domain FK537_03940 PF08278 DNA primase DnaG DnaB-binding FK537_03940 PF01807 CHC2 zinc finger FK537_03945 PF01488 Shikimate / quinate 5-dehydrogenase FK537_03945 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FK537_03945 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FK537_03955 PF03550 Outer membrane lipoprotein LolB FK537_03960 PF08544 GHMP kinases C terminal FK537_03960 PF00288 GHMP kinases N terminal domain FK537_03985 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FK537_03985 PF14572 Phosphoribosyl synthetase-associated domain FK537_03990 PF01386 Ribosomal L25p family FK537_03995 PF01195 Peptidyl-tRNA hydrolase FK537_04000 PF02261 Aspartate decarboxylase FK537_04025 PF09335 SNARE associated Golgi protein FK537_04050 PF04545 Sigma-70, region 4 FK537_04050 PF04539 Sigma-70 region 3 FK537_04050 PF04546 Sigma-70, non-essential region FK537_04050 PF04542 Sigma-70 region 2 FK537_04050 PF03979 Sigma-70 factor, region 1.1 FK537_04050 PF00140 Sigma-70 factor, region 1.2 FK537_04055 PF04359 Protein of unknown function (DUF493) FK537_04060 PF03099 Biotin/lipoate A/B protein ligase family FK537_04070 PF00465 Iron-containing alcohol dehydrogenase FK537_04080 PF13520 Amino acid permease FK537_04085 PF00588 SpoU rRNA Methylase family FK537_04090 PF10414 Sirohaem synthase dimerisation region FK537_04090 PF14824 Sirohaem biosynthesis protein central FK537_04090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FK537_04095 PF02403 Seryl-tRNA synthetase N-terminal domain FK537_04095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FK537_04105 PF03548 Outer membrane lipoprotein carrier protein LolA FK537_04110 PF01016 Ribosomal L27 protein FK537_04115 PF00829 Ribosomal prokaryotic L21 protein FK537_04120 PF00348 Polyprenyl synthetase FK537_04130 PF01569 PAP2 superfamily FK537_04135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FK537_04135 PF00529 HlyD membrane-fusion protein of T1SS FK537_04140 PF00873 AcrB/AcrD/AcrF family FK537_04145 PF02321 Outer membrane efflux protein FK537_04150 PF01906 Putative heavy-metal-binding FK537_04155 PF01906 Putative heavy-metal-binding FK537_04170 PF08264 Anticodon-binding domain of tRNA FK537_04170 PF00133 tRNA synthetases class I (I, L, M and V) FK537_04170 PF10458 Valyl tRNA synthetase tRNA binding arm FK537_04180 PF04480 Protein of unknown function (DUF559) FK537_04210 PF01797 Transposase IS200 like FK537_04215 PF00872 Transposase, Mutator family FK537_04225 PF04239 Protein of unknown function (DUF421) FK537_04235 PF00497 Bacterial extracellular solute-binding proteins, family 3 FK537_04240 PF00528 Binding-protein-dependent transport system inner membrane component FK537_04245 PF00528 Binding-protein-dependent transport system inner membrane component FK537_04250 PF00005 ABC transporter FK537_04255 PF00194 Eukaryotic-type carbonic anhydrase FK537_04270 PF01734 Patatin-like phospholipase FK537_04280 PF01145 SPFH domain / Band 7 family FK537_04285 PF00474 Sodium:solute symporter family FK537_04290 PF00512 His Kinase A (phospho-acceptor) domain FK537_04290 PF00672 HAMP domain FK537_04290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_04295 PF00072 Response regulator receiver domain FK537_04295 PF00486 Transcriptional regulatory protein, C terminal FK537_04300 PF00317 Ribonucleotide reductase, all-alpha domain FK537_04300 PF02867 Ribonucleotide reductase, barrel domain FK537_04300 PF03477 ATP cone domain FK537_04310 PF00268 Ribonucleotide reductase, small chain FK537_04315 PF04972 BON domain FK537_04315 PF01476 LysM domain FK537_04320 PF00550 Phosphopantetheine attachment site FK537_04330 PF00698 Acyl transferase domain FK537_04335 PF01783 Ribosomal L32p protein family FK537_04340 PF02620 Large ribosomal RNA subunit accumulation protein YceD FK537_04345 PF04315 Elongation factor P hydroxylase FK537_04350 PF01300 Telomere recombination FK537_04360 PF02616 Segregation and condensation protein ScpA FK537_04365 PF04079 Segregation and condensation complex subunit ScpB FK537_04370 PF00849 RNA pseudouridylate synthase FK537_04370 PF01479 S4 domain FK537_04385 PF00155 Aminotransferase class I and II FK537_04390 PF00202 Aminotransferase class-III FK537_04390 PF06968 Biotin and Thiamin Synthesis associated domain FK537_04390 PF04055 Radical SAM superfamily FK537_04395 PF08241 Methyltransferase domain FK537_04395 PF12697 Alpha/beta hydrolase family FK537_04400 PF00210 Ferritin-like domain FK537_04405 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FK537_04405 PF01653 NAD-dependent DNA ligase adenylation domain FK537_04405 PF00533 BRCA1 C Terminus (BRCT) domain FK537_04405 PF12826 Helix-hairpin-helix motif FK537_04405 PF03120 NAD-dependent DNA ligase OB-fold domain FK537_04410 PF04354 ZipA, C-terminal FtsZ-binding domain FK537_04415 PF06470 SMC proteins Flexible Hinge Domain FK537_04415 PF02463 RecF/RecN/SMC N terminal domain FK537_04425 PF01925 Sulfite exporter TauE/SafE FK537_04435 PF03309 Type III pantothenate kinase FK537_04445 PF02978 Signal peptide binding domain FK537_04445 PF00448 SRP54-type protein, GTPase domain FK537_04445 PF02881 SRP54-type protein, helical bundle domain FK537_04490 PF00313 'Cold-shock' DNA-binding domain FK537_04495 PF01207 Dihydrouridine synthase (Dus) FK537_04500 PF00293 NUDIX domain FK537_04505 PF01594 AI-2E family transporter FK537_04515 PF03831 PhnA domain FK537_04515 PF08274 PhnA Zinc-Ribbon FK537_04520 PF04343 Protein of unknown function, DUF488 FK537_04535 PF00849 RNA pseudouridylate synthase FK537_04565 PF00694 Aconitase C-terminal domain FK537_04565 PF00330 Aconitase family (aconitate hydratase) FK537_04570 PF01571 Aminomethyltransferase folate-binding domain FK537_04585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FK537_04600 PF02585 GlcNAc-PI de-N-acetylase FK537_04600 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FK537_04610 PF00982 Glycosyltransferase family 20 FK537_04615 PF02358 Trehalose-phosphatase FK537_04620 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FK537_04620 PF06827 Zinc finger found in FPG and IleRS FK537_04620 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FK537_04630 PF01741 Large-conductance mechanosensitive channel, MscL FK537_04640 PF00860 Permease family FK537_04645 PF08468 Methyltransferase small domain N-terminal FK537_04645 PF05175 Methyltransferase small domain FK537_04650 PF00324 Amino acid permease FK537_04660 PF00691 OmpA family FK537_04660 PF13505 Outer membrane protein beta-barrel domain FK537_04665 PF00114 Pilin (bacterial filament) FK537_04665 PF07963 Prokaryotic N-terminal methylation motif FK537_04670 PF02803 Thiolase, C-terminal domain FK537_04670 PF00108 Thiolase, N-terminal domain FK537_04675 PF01113 Dihydrodipicolinate reductase, N-terminus FK537_04675 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain FK537_04685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FK537_04685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FK537_04690 PF02515 CoA-transferase family III FK537_04695 PF12833 Helix-turn-helix domain FK537_04695 PF02311 AraC-like ligand binding domain FK537_04700 PF02803 Thiolase, C-terminal domain FK537_04700 PF00108 Thiolase, N-terminal domain FK537_04705 PF00378 Enoyl-CoA hydratase/isomerase FK537_04705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FK537_04705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FK537_04715 PF13673 Acetyltransferase (GNAT) domain FK537_04725 PF03006 Haemolysin-III related FK537_04730 PF00083 Sugar (and other) transporter FK537_04730 PF07690 Major Facilitator Superfamily FK537_04740 PF00149 Calcineurin-like phosphoesterase FK537_04745 PF13091 PLD-like domain FK537_04755 PF16360 GTP-binding GTPase Middle Region FK537_04755 PF13167 GTP-binding GTPase N-terminal FK537_04755 PF01926 50S ribosome-binding GTPase FK537_04785 PF00149 Calcineurin-like phosphoesterase FK537_04790 PF00398 Ribosomal RNA adenine dimethylase FK537_04795 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FK537_04800 PF00572 Ribosomal protein L13 FK537_04805 PF00380 Ribosomal protein S9/S16 FK537_04810 PF00043 Glutathione S-transferase, C-terminal domain FK537_04810 PF02798 Glutathione S-transferase, N-terminal domain FK537_04815 PF04386 Stringent starvation protein B FK537_04870 PF00795 Carbon-nitrogen hydrolase FK537_04880 PF00437 Type II/IV secretion system protein FK537_04900 PF01612 3'-5' exonuclease FK537_04900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FK537_04900 PF01367 5'-3' exonuclease, C-terminal SAM fold FK537_04900 PF00476 DNA polymerase family A FK537_04905 PF02325 YGGT family FK537_04910 PF14748 Pyrroline-5-carboxylate reductase dimerisation FK537_04910 PF03807 NADP oxidoreductase coenzyme F420-dependent FK537_04915 PF09179 TilS substrate binding domain FK537_04915 PF01171 PP-loop family FK537_04915 PF11734 TilS substrate C-terminal domain FK537_04920 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FK537_04925 PF02541 Ppx/GppA phosphatase family FK537_04930 PF00085 Thioredoxin FK537_04935 PF07497 Rho termination factor, RNA-binding domain FK537_04935 PF07498 Rho termination factor, N-terminal domain FK537_04935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FK537_04945 PF00216 Bacterial DNA-binding protein FK537_04950 PF01588 Putative tRNA binding domain FK537_04950 PF03483 B3/4 domain FK537_04950 PF03484 tRNA synthetase B5 domain FK537_04950 PF03147 Ferredoxin-fold anticodon binding domain FK537_04950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FK537_04955 PF01409 tRNA synthetases class II core domain (F) FK537_04955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FK537_04970 PF00453 Ribosomal protein L20 FK537_04975 PF01632 Ribosomal protein L35 FK537_04985 PF09335 SNARE associated Golgi protein FK537_04990 PF00043 Glutathione S-transferase, C-terminal domain FK537_04990 PF02798 Glutathione S-transferase, N-terminal domain FK537_04995 PF00011 Hsp20/alpha crystallin family FK537_05000 PF12323 Helix-turn-helix domain FK537_05000 PF01385 Probable transposase FK537_05000 PF07282 Putative transposase DNA-binding domain FK537_05010 PF00707 Translation initiation factor IF-3, C-terminal domain FK537_05010 PF05198 Translation initiation factor IF-3, N-terminal domain FK537_05015 PF03129 Anticodon binding domain FK537_05015 PF02824 TGS domain FK537_05015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FK537_05015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FK537_05020 PF13193 AMP-binding enzyme C-terminal domain FK537_05020 PF00501 AMP-binding enzyme FK537_05025 PF04751 Protein of unknown function (DUF615) FK537_05030 PF00381 PTS HPr component phosphorylation site FK537_05035 PF03668 P-loop ATPase protein family FK537_05040 PF02569 Pantoate-beta-alanine ligase FK537_05045 PF02548 Ketopantoate hydroxymethyltransferase FK537_05050 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FK537_05055 PF12627 Probable RNA and SrmB- binding site of polymerase A FK537_05055 PF12626 Polymerase A arginine-rich C-terminus FK537_05055 PF01743 Poly A polymerase head domain FK537_05065 PF03819 MazG nucleotide pyrophosphohydrolase domain FK537_05075 PF01926 50S ribosome-binding GTPase FK537_05075 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FK537_05080 PF01011 PQQ enzyme repeat FK537_05080 PF13360 PQQ-like domain FK537_05090 PF03129 Anticodon binding domain FK537_05090 PF13393 Histidyl-tRNA synthetase FK537_05095 PF04551 GcpE protein FK537_05100 PF13464 Domain of unknown function (DUF4115) FK537_05110 PF04055 Radical SAM superfamily FK537_05115 PF00334 Nucleoside diphosphate kinase FK537_05120 PF04384 Iron-sulphur cluster assembly FK537_05125 PF01569 PAP2 superfamily FK537_05130 PF13439 Glycosyltransferase Family 4 FK537_05130 PF00534 Glycosyl transferases group 1 FK537_05155 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FK537_05155 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FK537_05160 PF10369 Small subunit of acetolactate synthase FK537_05165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FK537_05165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FK537_05165 PF00205 Thiamine pyrophosphate enzyme, central domain FK537_05175 PF08264 Anticodon-binding domain of tRNA FK537_05175 PF00133 tRNA synthetases class I (I, L, M and V) FK537_05175 PF13603 Leucyl-tRNA synthetase, Domain 2 FK537_05175 PF09334 tRNA synthetases class I (M) FK537_05190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FK537_05195 PF00005 ABC transporter FK537_05195 PF12704 MacB-like periplasmic core domain FK537_05195 PF02687 FtsX-like permease family FK537_05200 PF02321 Outer membrane efflux protein FK537_05265 PF13007 Transposase C of IS166 homeodomain FK537_05265 PF03050 Transposase IS66 family FK537_05265 PF13817 IS66 C-terminal element FK537_05265 PF13005 zinc-finger binding domain of transposase IS66 FK537_05315 PF13817 IS66 C-terminal element FK537_05315 PF13007 Transposase C of IS166 homeodomain FK537_05315 PF03050 Transposase IS66 family FK537_05315 PF13005 zinc-finger binding domain of transposase IS66 FK537_05340 PF04717 Type VI secretion system, phage-baseplate injector FK537_05355 PF00929 Exonuclease FK537_05360 PF03193 RsgA GTPase FK537_05370 PF00462 Glutaredoxin FK537_05375 PF02556 Preprotein translocase subunit SecB FK537_05380 PF04127 DNA / pantothenate metabolism flavoprotein FK537_05380 PF02441 Flavoprotein FK537_05385 PF04002 RadC-like JAB domain FK537_05390 PF01062 Bestrophin, RFP-TM, chloride channel FK537_05395 PF02811 PHP domain FK537_05400 PF04279 Intracellular septation protein A FK537_05405 PF03795 YCII-related domain FK537_05415 PF01266 FAD dependent oxidoreductase FK537_05415 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FK537_05425 PF04461 Protein of unknown function (DUF520) FK537_05435 PF03061 Thioesterase superfamily FK537_05440 PF00085 Thioredoxin FK537_05450 PF04273 Putative phosphatase (DUF442) FK537_05450 PF00753 Metallo-beta-lactamase superfamily FK537_05465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FK537_05465 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_05465 PF00403 Heavy-metal-associated domain FK537_05500 PF01066 CDP-alcohol phosphatidyltransferase FK537_05505 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FK537_05535 PF00056 lactate/malate dehydrogenase, NAD binding domain FK537_05535 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FK537_05545 PF01464 Transglycosylase SLT domain FK537_05545 PF10145 Phage-related minor tail protein FK537_05545 PF01551 Peptidase family M23 FK537_05550 PF00919 Uncharacterized protein family UPF0004 FK537_05550 PF01938 TRAM domain FK537_05550 PF04055 Radical SAM superfamily FK537_05555 PF02562 PhoH-like protein FK537_05560 PF02130 Uncharacterized protein family UPF0054 FK537_05610 PF03358 NADPH-dependent FMN reductase FK537_05615 PF03631 Virulence factor BrkB FK537_05620 PF00892 EamA-like transporter family FK537_05630 PF13007 Transposase C of IS166 homeodomain FK537_05630 PF13817 IS66 C-terminal element FK537_05630 PF13005 zinc-finger binding domain of transposase IS66 FK537_05630 PF03050 Transposase IS66 family FK537_05650 PF01618 MotA/TolQ/ExbB proton channel family FK537_05660 PF00551 Formyl transferase FK537_05660 PF01842 ACT domain FK537_05665 PF00440 Bacterial regulatory proteins, tetR family FK537_05665 PF08360 QacR-like protein, C-terminal region FK537_05670 PF00171 Aldehyde dehydrogenase family FK537_05675 PF00830 Ribosomal L28 family FK537_05680 PF00471 Ribosomal protein L33 FK537_05685 PF00999 Sodium/hydrogen exchanger family FK537_05685 PF02254 TrkA-N domain FK537_05700 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FK537_05705 PF00580 UvrD/REP helicase N-terminal domain FK537_05705 PF13361 UvrD-like helicase C-terminal domain FK537_05715 PF02595 Glycerate kinase family FK537_05730 PF08272 Topoisomerase I zinc-ribbon-like FK537_05730 PF01131 DNA topoisomerase FK537_05730 PF01751 Toprim domain FK537_05730 PF01396 Topoisomerase DNA binding C4 zinc finger FK537_05745 PF04102 SlyX FK537_05755 PF03279 Bacterial lipid A biosynthesis acyltransferase FK537_05770 PF01118 Semialdehyde dehydrogenase, NAD binding domain FK537_05770 PF02774 Semialdehyde dehydrogenase, dimerisation domain FK537_05790 PF01416 tRNA pseudouridine synthase FK537_05800 PF01176 Translation initiation factor 1A / IF-1 FK537_05810 PF00180 Isocitrate/isopropylmalate dehydrogenase FK537_05820 PF00694 Aconitase C-terminal domain FK537_05825 PF00330 Aconitase family (aconitate hydratase) FK537_05835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_05835 PF03466 LysR substrate binding domain FK537_05840 PF03781 Sulfatase-modifying factor enzyme 1 FK537_05840 PF12867 DinB superfamily FK537_05855 PF00293 NUDIX domain FK537_05860 PF05524 PEP-utilising enzyme, N-terminal FK537_05860 PF02896 PEP-utilising enzyme, TIM barrel domain FK537_05860 PF00391 PEP-utilising enzyme, mobile domain FK537_05860 PF01590 GAF domain FK537_05875 PF18158 Adaptive response protein AidB N-terminal domain FK537_05875 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_05875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_05885 PF00199 Catalase FK537_05885 PF06628 Catalase-related immune-responsive FK537_05890 PF12706 Beta-lactamase superfamily domain FK537_05900 PF14759 Reductase C-terminal FK537_05900 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_05905 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FK537_05910 PF00106 short chain dehydrogenase FK537_05915 PF00355 Rieske [2Fe-2S] domain FK537_05920 PF00866 Ring hydroxylating beta subunit FK537_05925 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FK537_05925 PF00355 Rieske [2Fe-2S] domain FK537_05930 PF03466 LysR substrate binding domain FK537_05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_05940 PF00561 alpha/beta hydrolase fold FK537_05945 PF03573 outer membrane porin, OprD family FK537_05950 PF07836 DmpG-like communication domain FK537_05950 PF00682 HMGL-like FK537_05955 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation FK537_05955 PF01118 Semialdehyde dehydrogenase, NAD binding domain FK537_05960 PF01557 Fumarylacetoacetate (FAA) hydrolase family FK537_05965 PF13419 Haloacid dehalogenase-like hydrolase FK537_05970 PF01479 S4 domain FK537_05970 PF00849 RNA pseudouridylate synthase FK537_05980 PF12111 Polyribonucleotide phosphorylase C terminal FK537_05980 PF10150 Ribonuclease E/G family FK537_05980 PF00575 S1 RNA binding domain FK537_05985 PF00501 AMP-binding enzyme FK537_05985 PF13193 AMP-binding enzyme C-terminal domain FK537_06005 PF01797 Transposase IS200 like FK537_06020 PF04024 PspC domain FK537_06025 PF01743 Poly A polymerase head domain FK537_06025 PF00571 CBS domain FK537_06030 PF02091 Glycyl-tRNA synthetase alpha subunit FK537_06035 PF05746 DALR anticodon binding domain FK537_06035 PF02092 Glycyl-tRNA synthetase beta subunit FK537_06060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FK537_06060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FK537_06075 PF01209 ubiE/COQ5 methyltransferase family FK537_06085 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FK537_06085 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_06085 PF13247 4Fe-4S dicluster domain FK537_06095 PF03884 DNA gyrase inhibitor YacG FK537_06105 PF00753 Metallo-beta-lactamase superfamily FK537_06110 PF00762 Ferrochelatase FK537_06120 PF01177 Asp/Glu/Hydantoin racemase FK537_06365 PF04717 Type VI secretion system, phage-baseplate injector FK537_06370 PF01206 Sulfurtransferase TusA FK537_06375 PF03471 Transporter associated domain FK537_06375 PF00571 CBS domain FK537_06380 PF00795 Carbon-nitrogen hydrolase FK537_06390 PF07963 Prokaryotic N-terminal methylation motif FK537_06390 PF08334 Type II secretion system (T2SS), protein G FK537_06395 PF00482 Type II secretion system (T2SS), protein F FK537_06400 PF00271 Helicase conserved C-terminal domain FK537_06400 PF17764 3′ DNA-binding domain (3′BD) FK537_06400 PF18074 Primosomal protein N C-terminal domain FK537_06400 PF00270 DEAD/DEAH box helicase FK537_06400 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FK537_06405 PF00999 Sodium/hydrogen exchanger family FK537_06405 PF02254 TrkA-N domain FK537_06410 PF01430 Hsp33 protein FK537_06425 PF04325 Protein of unknown function (DUF465) FK537_06435 PF00575 S1 RNA binding domain FK537_06435 PF03725 3' exoribonuclease family, domain 2 FK537_06435 PF01138 3' exoribonuclease family, domain 1 FK537_06435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FK537_06435 PF00013 KH domain FK537_06440 PF00312 Ribosomal protein S15 FK537_06450 PF13538 UvrD-like helicase C-terminal domain FK537_06455 PF12705 PD-(D/E)XK nuclease superfamily FK537_06455 PF00580 UvrD/REP helicase N-terminal domain FK537_06455 PF13361 UvrD-like helicase C-terminal domain FK537_06460 PF17946 RecC C-terminal domain FK537_06470 PF03976 Polyphosphate kinase 2 (PPK2) FK537_06480 PF01209 ubiE/COQ5 methyltransferase family FK537_06490 PF03109 ABC1 family FK537_06500 PF01502 Phosphoribosyl-AMP cyclohydrolase FK537_06515 PF13244 Domain of unknown function (DUF4040) FK537_06515 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FK537_06515 PF00361 Proton-conducting membrane transporter FK537_06515 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FK537_06520 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FK537_06525 PF00361 Proton-conducting membrane transporter FK537_06535 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FK537_06545 PF02033 Ribosome-binding factor A FK537_06550 PF08364 Bacterial translation initiation factor IF-2 associated region FK537_06550 PF00009 Elongation factor Tu GTP binding domain FK537_06550 PF04760 Translation initiation factor IF-2, N-terminal region FK537_06550 PF11987 Translation-initiation factor 2 FK537_06555 PF00575 S1 RNA binding domain FK537_06555 PF08529 NusA N-terminal domain FK537_06555 PF13184 NusA-like KH domain FK537_06560 PF02576 RimP N-terminal domain FK537_06560 PF17384 RimP C-terminal SH3 domain FK537_06585 PF03840 Preprotein translocase SecG subunit FK537_06590 PF00121 Triosephosphate isomerase FK537_06595 PF00437 Type II/IV secretion system protein FK537_06595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FK537_06600 PF00482 Type II secretion system (T2SS), protein F FK537_06605 PF06750 Bacterial Peptidase A24 N-terminal domain FK537_06605 PF01478 Type IV leader peptidase family FK537_06610 PF01121 Dephospho-CoA kinase FK537_06620 PF00588 SpoU rRNA Methylase family FK537_06620 PF08032 RNA 2'-O ribose methyltransferase substrate binding FK537_06625 PF06865 Pyrimidine/purine nucleoside phosphorylase FK537_06630 PF02463 RecF/RecN/SMC N terminal domain FK537_06635 PF02622 Uncharacterized ACR, COG1678 FK537_06640 PF03652 Holliday junction resolvase FK537_06655 PF00005 ABC transporter FK537_06655 PF00664 ABC transporter transmembrane region FK537_06660 PF01066 CDP-alcohol phosphatidyltransferase FK537_06670 PF02151 UvrB/uvrC motif FK537_06670 PF08459 UvrC Helix-hairpin-helix N-terminal FK537_06670 PF01541 GIY-YIG catalytic domain FK537_06675 PF07724 AAA domain (Cdc48 subfamily) FK537_06675 PF10431 C-terminal, D2-small domain, of ClpB protein FK537_06690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FK537_06690 PF00378 Enoyl-CoA hydratase/isomerase FK537_06690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FK537_06695 PF00108 Thiolase, N-terminal domain FK537_06695 PF02803 Thiolase, C-terminal domain FK537_06700 PF00860 Permease family FK537_06710 PF01323 DSBA-like thioredoxin domain FK537_06735 PF00183 Hsp90 protein FK537_06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_06755 PF13726 Na+-H+ antiporter family FK537_06755 PF03553 Na+/H+ antiporter family FK537_06760 PF00561 alpha/beta hydrolase fold FK537_06775 PF00623 RNA polymerase Rpb1, domain 2 FK537_06775 PF04997 RNA polymerase Rpb1, domain 1 FK537_06775 PF04998 RNA polymerase Rpb1, domain 5 FK537_06775 PF05000 RNA polymerase Rpb1, domain 4 FK537_06775 PF04983 RNA polymerase Rpb1, domain 3 FK537_06780 PF04560 RNA polymerase Rpb2, domain 7 FK537_06780 PF10385 RNA polymerase beta subunit external 1 domain FK537_06780 PF00562 RNA polymerase Rpb2, domain 6 FK537_06780 PF04565 RNA polymerase Rpb2, domain 3 FK537_06780 PF04561 RNA polymerase Rpb2, domain 2 FK537_06780 PF04563 RNA polymerase beta subunit FK537_06785 PF00542 Ribosomal protein L7/L12 C-terminal domain FK537_06785 PF16320 Ribosomal protein L7/L12 dimerisation domain FK537_06790 PF00466 Ribosomal protein L10 FK537_06795 PF00687 Ribosomal protein L1p/L10e family FK537_06800 PF03946 Ribosomal protein L11, N-terminal domain FK537_06800 PF00298 Ribosomal protein L11, RNA binding domain FK537_06805 PF02357 Transcription termination factor nusG FK537_06805 PF00467 KOW motif FK537_06810 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FK537_06820 PF00009 Elongation factor Tu GTP binding domain FK537_06820 PF03144 Elongation factor Tu domain 2 FK537_06820 PF03143 Elongation factor Tu C-terminal domain FK537_06845 PF04715 Anthranilate synthase component I, N terminal region FK537_06845 PF00425 chorismate binding enzyme FK537_06850 PF13419 Haloacid dehalogenase-like hydrolase FK537_06855 PF16697 Inner membrane component of T3SS, cytoplasmic domain FK537_06860 PF00263 Bacterial type II and III secretion system protein FK537_06860 PF03958 Bacterial type II/III secretion system short domain FK537_06875 PF00816 H-NS histone family FK537_06880 PF03061 Thioesterase superfamily FK537_06900 PF03900 Porphobilinogen deaminase, C-terminal domain FK537_06900 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FK537_06905 PF00072 Response regulator receiver domain FK537_06905 PF04397 LytTr DNA-binding domain FK537_06910 PF06580 Histidine kinase FK537_06910 PF07694 5TMR of 5TMR-LYT FK537_06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_06915 PF14698 Argininosuccinate lyase C-terminal FK537_06915 PF00206 Lyase FK537_06920 PF04362 Bacterial Fe(2+) trafficking FK537_06925 PF01895 PhoU domain FK537_06940 PF13667 ThiC-associated domain FK537_06940 PF01964 Radical SAM ThiC family FK537_06945 PF00293 NUDIX domain FK537_06950 PF00149 Calcineurin-like phosphoesterase FK537_06955 PF01258 Prokaryotic dksA/traR C4-type zinc finger FK537_06960 PF00749 tRNA synthetases class I (E and Q), catalytic domain FK537_06970 PF01098 Cell cycle protein FK537_06975 PF02875 Mur ligase family, glutamate ligase domain FK537_06975 PF08245 Mur ligase middle domain FK537_06985 PF07664 Ferrous iron transport protein B C terminus FK537_06985 PF02421 Ferrous iron transport protein B FK537_06985 PF07670 Nucleoside recognition FK537_06995 PF00589 Phage integrase family FK537_06995 PF02899 Phage integrase, N-terminal SAM-like domain FK537_07000 PF10411 Disulfide bond isomerase protein N-terminus FK537_07000 PF13098 Thioredoxin-like domain FK537_07005 PF01842 ACT domain FK537_07005 PF03447 Homoserine dehydrogenase, NAD binding domain FK537_07005 PF00742 Homoserine dehydrogenase FK537_07010 PF00291 Pyridoxal-phosphate dependent enzyme FK537_07015 PF00768 D-alanyl-D-alanine carboxypeptidase FK537_07020 PF00072 Response regulator receiver domain FK537_07020 PF00196 Bacterial regulatory proteins, luxR family FK537_07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_07025 PF00512 His Kinase A (phospho-acceptor) domain FK537_07030 PF00158 Sigma-54 interaction domain FK537_07030 PF00072 Response regulator receiver domain FK537_07030 PF02954 Bacterial regulatory protein, Fis family FK537_07035 PF03572 Peptidase family S41 FK537_07035 PF00595 PDZ domain FK537_07040 PF01676 Metalloenzyme superfamily FK537_07040 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FK537_07045 PF03739 Lipopolysaccharide export system permease LptF/LptG FK537_07050 PF03739 Lipopolysaccharide export system permease LptF/LptG FK537_07055 PF00883 Cytosol aminopeptidase family, catalytic domain FK537_07055 PF02789 Cytosol aminopeptidase family, N-terminal domain FK537_07075 PF09335 SNARE associated Golgi protein FK537_07080 PF00677 Lumazine binding domain FK537_07090 PF01872 RibD C-terminal domain FK537_07090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FK537_07095 PF03477 ATP cone domain FK537_07100 PF00909 Ammonium Transporter Family FK537_07105 PF00543 Nitrogen regulatory protein P-II FK537_07115 PF01078 Magnesium chelatase, subunit ChlI FK537_07115 PF13335 Magnesium chelatase, subunit ChlI C-terminal FK537_07125 PF03573 outer membrane porin, OprD family FK537_07130 PF00719 Inorganic pyrophosphatase FK537_07145 PF00501 AMP-binding enzyme FK537_07145 PF13193 AMP-binding enzyme C-terminal domain FK537_07150 PF03989 DNA gyrase C-terminal domain, beta-propeller FK537_07150 PF00521 DNA gyrase/topoisomerase IV, subunit A FK537_07155 PF07690 Major Facilitator Superfamily FK537_07160 PF03458 UPF0126 domain FK537_07165 PF02810 SEC-C motif FK537_07170 PF03741 Integral membrane protein TerC family FK537_07170 PF03471 Transporter associated domain FK537_07170 PF00571 CBS domain FK537_07175 PF03641 Possible lysine decarboxylase FK537_07190 PF07690 Major Facilitator Superfamily FK537_07205 PF00817 impB/mucB/samB family FK537_07205 PF11799 impB/mucB/samB family C-terminal domain FK537_07205 PF11798 IMS family HHH motif FK537_07225 PF04055 Radical SAM superfamily FK537_07225 PF11842 Domain of unknown function (DUF3362) FK537_07225 PF08497 Radical SAM N-terminal FK537_07230 PF07690 Major Facilitator Superfamily FK537_07270 PF01327 Polypeptide deformylase FK537_07280 PF02481 DNA recombination-mediator protein A FK537_07280 PF17782 DprA winged helix domain FK537_07285 PF01300 Telomere recombination FK537_07295 PF00892 EamA-like transporter family FK537_07300 PF00255 Glutathione peroxidase FK537_07310 PF02678 Pirin FK537_07310 PF05726 Pirin C-terminal cupin domain FK537_07315 PF11008 Protein of unknown function (DUF2846) FK537_07320 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FK537_07325 PF02874 ATP synthase alpha/beta family, beta-barrel domain FK537_07325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FK537_07330 PF00231 ATP synthase FK537_07335 PF02874 ATP synthase alpha/beta family, beta-barrel domain FK537_07335 PF00306 ATP synthase alpha/beta chain, C terminal domain FK537_07335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FK537_07340 PF00213 ATP synthase delta (OSCP) subunit FK537_07345 PF00430 ATP synthase B/B' CF(0) FK537_07350 PF00137 ATP synthase subunit C FK537_07355 PF00119 ATP synthase A chain FK537_07375 PF00005 ABC transporter FK537_07380 PF00950 ABC 3 transport family FK537_07385 PF01810 LysE type translocator FK537_07390 PF04261 Dyp-type peroxidase family FK537_07445 PF04717 Type VI secretion system, phage-baseplate injector FK537_07450 PF03949 Malic enzyme, NAD binding domain FK537_07450 PF00390 Malic enzyme, N-terminal domain FK537_07465 PF03485 Arginyl tRNA synthetase N terminal domain FK537_07465 PF05746 DALR anticodon binding domain FK537_07465 PF00750 tRNA synthetases class I (R) FK537_07485 PF00072 Response regulator receiver domain FK537_07485 PF00990 Diguanylate cyclase, GGDEF domain FK537_07490 PF14338 Mrr N-terminal domain FK537_07490 PF04471 Restriction endonuclease FK537_07495 PF00117 Glutamine amidotransferase class-I FK537_07495 PF00958 GMP synthase C terminal domain FK537_07495 PF02540 NAD synthase FK537_07500 PF07681 DoxX FK537_07505 PF09335 SNARE associated Golgi protein FK537_07520 PF13614 AAA domain FK537_07530 PF01722 BolA-like protein FK537_07565 PF07120 Protein of unknown function (DUF1376) FK537_07645 PF00717 Peptidase S24-like FK537_07650 PF13438 Domain of unknown function (DUF4113) FK537_07650 PF11798 IMS family HHH motif FK537_07650 PF11799 impB/mucB/samB family C-terminal domain FK537_07650 PF00817 impB/mucB/samB family FK537_07665 PF02601 Exonuclease VII, large subunit FK537_07665 PF13742 OB-fold nucleic acid binding domain FK537_07735 PF13737 Transposase DDE domain FK537_07745 PF00925 GTP cyclohydrolase II FK537_07745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FK537_07750 PF00885 6,7-dimethyl-8-ribityllumazine synthase FK537_07755 PF01029 NusB family FK537_07760 PF02769 AIR synthase related protein, C-terminal domain FK537_07760 PF00586 AIR synthase related protein, N-terminal domain FK537_07765 PF04608 Phosphatidylglycerophosphatase A FK537_07770 PF14602 Hexapeptide repeat of succinyl-transferase FK537_07770 PF12804 MobA-like NTP transferase domain FK537_07770 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_07775 PF01380 SIS domain FK537_07780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FK537_07780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FK537_07780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FK537_07780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FK537_07785 PF16363 GDP-mannose 4,6 dehydratase FK537_07790 PF00342 Phosphoglucose isomerase FK537_07795 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FK537_07795 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FK537_07795 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FK537_07800 PF00483 Nucleotidyl transferase FK537_07805 PF02719 Polysaccharide biosynthesis protein FK537_07810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FK537_07815 PF14602 Hexapeptide repeat of succinyl-transferase FK537_07815 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_07815 PF17836 PglD N-terminal domain FK537_07820 PF02397 Bacterial sugar transferase FK537_07825 PF13477 Glycosyl transferase 4-like FK537_07825 PF00534 Glycosyl transferases group 1 FK537_07840 PF02350 UDP-N-acetylglucosamine 2-epimerase FK537_07845 PF00535 Glycosyl transferase family 2 FK537_07850 PF00535 Glycosyl transferase family 2 FK537_07855 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FK537_07855 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FK537_07855 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FK537_07860 PF01943 Polysaccharide biosynthesis protein FK537_07880 PF08889 WbqC-like protein family FK537_07885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FK537_07890 PF00483 Nucleotidyl transferase FK537_07895 PF16363 GDP-mannose 4,6 dehydratase FK537_07900 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FK537_07900 PF02563 Polysaccharide biosynthesis/export protein FK537_07900 PF10531 SLBB domain FK537_07905 PF01451 Low molecular weight phosphotyrosine protein phosphatase FK537_07910 PF02706 Chain length determinant protein FK537_07910 PF13614 AAA domain FK537_07910 PF13807 G-rich domain on putative tyrosine kinase FK537_07915 PF14052 Capsule assembly protein Wzi FK537_07925 PF05173 Dihydrodipicolinate reductase, C-terminus FK537_07925 PF01113 Dihydrodipicolinate reductase, N-terminus FK537_07935 PF00684 DnaJ central domain FK537_07935 PF00226 DnaJ domain FK537_07935 PF01556 DnaJ C terminal domain FK537_07945 PF00873 AcrB/AcrD/AcrF family FK537_07950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FK537_07955 PF00440 Bacterial regulatory proteins, tetR family FK537_07960 PF00311 Phosphoenolpyruvate carboxylase FK537_07965 PF00860 Permease family FK537_07970 PF01797 Transposase IS200 like FK537_07990 PF00920 Dehydratase family FK537_08000 PF00920 Dehydratase family FK537_08005 PF02911 Formyl transferase, C-terminal domain FK537_08005 PF00551 Formyl transferase FK537_08010 PF01189 16S rRNA methyltransferase RsmB/F FK537_08010 PF01029 NusB family FK537_08020 PF00209 Sodium:neurotransmitter symporter family FK537_08025 PF00171 Aldehyde dehydrogenase family FK537_08035 PF07690 Major Facilitator Superfamily FK537_08065 PF00149 Calcineurin-like phosphoesterase FK537_08065 PF02872 5'-nucleotidase, C-terminal domain FK537_08090 PF00579 tRNA synthetases class I (W and Y) FK537_08095 PF03702 Anhydro-N-acetylmuramic acid kinase FK537_08100 PF01521 Iron-sulphur cluster biosynthesis FK537_08120 PF00005 ABC transporter FK537_08120 PF12848 ABC transporter FK537_08125 PF00107 Zinc-binding dehydrogenase FK537_08125 PF13823 Alcohol dehydrogenase GroES-associated FK537_08125 PF08240 Alcohol dehydrogenase GroES-like domain FK537_08130 PF18053 DNA gyrase B subunit insert domain FK537_08130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_08130 PF01751 Toprim domain FK537_08130 PF00986 DNA gyrase B subunit, carboxyl terminus FK537_08130 PF00204 DNA gyrase B FK537_08135 PF02463 RecF/RecN/SMC N terminal domain FK537_08140 PF02768 DNA polymerase III beta subunit, C-terminal domain FK537_08140 PF02767 DNA polymerase III beta subunit, central domain FK537_08140 PF00712 DNA polymerase III beta subunit, N-terminal domain FK537_08145 PF08299 Bacterial dnaA protein helix-turn-helix FK537_08145 PF00308 Bacterial dnaA protein FK537_08145 PF11638 DnaA N-terminal domain FK537_08150 PF00468 Ribosomal protein L34 FK537_08155 PF00825 Ribonuclease P FK537_08160 PF01809 Putative membrane protein insertion efficiency factor FK537_08165 PF02096 60Kd inner membrane protein FK537_08165 PF14849 YidC periplasmic domain FK537_08170 PF10396 GTP-binding protein TrmE N-terminus FK537_08170 PF12631 MnmE helical domain FK537_08170 PF01926 50S ribosome-binding GTPase FK537_08185 PF01797 Transposase IS200 like FK537_08195 PF02583 Metal-sensitive transcriptional repressor FK537_08200 PF16916 Dimerisation domain of Zinc Transporter FK537_08200 PF01545 Cation efflux family FK537_08205 PF10411 Disulfide bond isomerase protein N-terminus FK537_08205 PF13098 Thioredoxin-like domain FK537_08215 PF00156 Phosphoribosyl transferase domain FK537_08220 PF01979 Amidohydrolase family FK537_08225 PF03741 Integral membrane protein TerC family FK537_08235 PF14542 GCN5-related N-acetyl-transferase FK537_08240 PF08240 Alcohol dehydrogenase GroES-like domain FK537_08240 PF00107 Zinc-binding dehydrogenase FK537_08240 PF13823 Alcohol dehydrogenase GroES-associated FK537_08245 PF08245 Mur ligase middle domain FK537_08245 PF02875 Mur ligase family, glutamate ligase domain FK537_08245 PF01225 Mur ligase family, catalytic domain FK537_08260 PF00731 AIR carboxylase FK537_08265 PF02222 ATP-grasp domain FK537_08265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FK537_08275 PF13406 Transglycosylase SLT domain FK537_08290 PF00012 Hsp70 protein FK537_08295 PF01025 GrpE FK537_08310 PF07859 alpha/beta hydrolase fold FK537_08320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FK537_08350 PF07690 Major Facilitator Superfamily FK537_08355 PF07995 Glucose / Sorbosone dehydrogenase FK537_08365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FK537_08370 PF01252 Signal peptidase (SPase) II FK537_08375 PF00133 tRNA synthetases class I (I, L, M and V) FK537_08375 PF08264 Anticodon-binding domain of tRNA FK537_08375 PF06827 Zinc finger found in FPG and IleRS FK537_08380 PF01687 Riboflavin kinase FK537_08380 PF06574 FAD synthetase FK537_08390 PF08362 YcdC-like protein, C-terminal region FK537_08390 PF00440 Bacterial regulatory proteins, tetR family FK537_08395 PF12323 Helix-turn-helix domain FK537_08395 PF07282 Putative transposase DNA-binding domain FK537_08395 PF01385 Probable transposase FK537_08400 PF13411 MerR HTH family regulatory protein FK537_08400 PF00145 C-5 cytosine-specific DNA methylase FK537_08405 PF00005 ABC transporter FK537_08410 PF00528 Binding-protein-dependent transport system inner membrane component FK537_08415 PF00296 Luciferase-like monooxygenase FK537_08420 PF09084 NMT1/THI5 like FK537_08425 PF09084 NMT1/THI5 like FK537_08430 PF00583 Acetyltransferase (GNAT) family FK537_08430 PF00696 Amino acid kinase family FK537_08450 PF00106 short chain dehydrogenase FK537_08455 PF13419 Haloacid dehalogenase-like hydrolase FK537_08465 PF01323 DSBA-like thioredoxin domain FK537_08470 PF00440 Bacterial regulatory proteins, tetR family FK537_08475 PF03725 3' exoribonuclease family, domain 2 FK537_08475 PF01138 3' exoribonuclease family, domain 1 FK537_08480 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FK537_08480 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FK537_08485 PF01510 N-acetylmuramoyl-L-alanine amidase FK537_08490 PF03023 Lipid II flippase MurJ FK537_08495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FK537_08495 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FK537_08500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FK537_08500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FK537_08505 PF00107 Zinc-binding dehydrogenase FK537_08505 PF08240 Alcohol dehydrogenase GroES-like domain FK537_08510 PF03352 Methyladenine glycosylase FK537_08520 PF01551 Peptidase family M23 FK537_08525 PF10576 Iron-sulfur binding domain of endonuclease III FK537_08525 PF14815 NUDIX domain FK537_08525 PF00730 HhH-GPD superfamily base excision DNA repair protein FK537_08525 PF00633 Helix-hairpin-helix motif FK537_08540 PF07043 Protein of unknown function (DUF1328) FK537_08545 PF03692 Putative zinc- or iron-chelating domain FK537_08550 PF00004 ATPase family associated with various cellular activities (AAA) FK537_08550 PF12002 MgsA AAA+ ATPase C terminal FK537_08550 PF16193 AAA C-terminal domain FK537_08555 PF01259 SAICAR synthetase FK537_08565 PF00701 Dihydrodipicolinate synthetase family FK537_08570 PF07690 Major Facilitator Superfamily FK537_08575 PF00857 Isochorismatase family FK537_08580 PF01758 Sodium Bile acid symporter family FK537_08585 PF13089 Polyphosphate kinase N-terminal domain FK537_08585 PF17941 Polyphosphate kinase C-terminal domain 1 FK537_08585 PF13090 Polyphosphate kinase C-terminal domain 2 FK537_08585 PF02503 Polyphosphate kinase middle domain FK537_08610 PF02580 D-Tyr-tRNA(Tyr) deacylase FK537_08615 PF00199 Catalase FK537_08615 PF06628 Catalase-related immune-responsive FK537_08625 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FK537_08625 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FK537_08630 PF00581 Rhodanese-like domain FK537_08635 PF02666 Phosphatidylserine decarboxylase FK537_08640 PF00512 His Kinase A (phospho-acceptor) domain FK537_08640 PF11808 Phosphate regulon sensor protein PhoR FK537_08640 PF00989 PAS fold FK537_08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_08645 PF00072 Response regulator receiver domain FK537_08645 PF00486 Transcriptional regulatory protein, C terminal FK537_08655 PF00106 short chain dehydrogenase FK537_08660 PF01797 Transposase IS200 like FK537_08670 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FK537_08675 PF01554 MatE FK537_08680 PF00155 Aminotransferase class I and II FK537_08685 PF04286 Protein of unknown function (DUF445) FK537_08700 PF04262 Glutamate-cysteine ligase FK537_08705 PF02600 Disulfide bond formation protein DsbB FK537_08715 PF05728 Uncharacterised protein family (UPF0227) FK537_08720 PF00986 DNA gyrase B subunit, carboxyl terminus FK537_08720 PF01751 Toprim domain FK537_08720 PF00204 DNA gyrase B FK537_08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_08730 PF02653 Branched-chain amino acid transport system / permease component FK537_08740 PF00005 ABC transporter FK537_08740 PF12399 Branched-chain amino acid ATP-binding cassette transporter FK537_08745 PF00005 ABC transporter FK537_08755 PF00939 Sodium:sulfate symporter transmembrane region FK537_08770 PF04115 Ureidoglycolate lyase FK537_08775 PF03561 Allantoicase repeat FK537_08780 PF01494 FAD binding domain FK537_08785 PF00583 Acetyltransferase (GNAT) family FK537_08795 PF00576 HIUase/Transthyretin family FK537_08825 PF02798 Glutathione S-transferase, N-terminal domain FK537_08825 PF00043 Glutathione S-transferase, C-terminal domain FK537_08830 PF00990 Diguanylate cyclase, GGDEF domain FK537_08835 PF02525 Flavodoxin-like fold FK537_08840 PF07859 alpha/beta hydrolase fold FK537_08850 PF03960 ArsC family FK537_08855 PF03372 Endonuclease/Exonuclease/phosphatase family FK537_08860 PF00156 Phosphoribosyl transferase domain FK537_08900 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FK537_08910 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FK537_08910 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FK537_08915 PF03033 Glycosyltransferase family 28 N-terminal domain FK537_08915 PF04101 Glycosyltransferase family 28 C-terminal domain FK537_08920 PF01225 Mur ligase family, catalytic domain FK537_08920 PF02875 Mur ligase family, glutamate ligase domain FK537_08920 PF08245 Mur ligase middle domain FK537_08925 PF07478 D-ala D-ala ligase C-terminus FK537_08925 PF01820 D-ala D-ala ligase N-terminus FK537_08930 PF08478 POTRA domain, FtsQ-type FK537_08930 PF03799 Cell division protein FtsQ FK537_08935 PF02491 SHS2 domain inserted in FTSA FK537_08940 PF12327 FtsZ family, C-terminal domain FK537_08940 PF00091 Tubulin/FtsZ family, GTPase domain FK537_08945 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FK537_08960 PF17831 Pyruvate dehydrogenase E1 component middle domain FK537_08960 PF00456 Transketolase, thiamine diphosphate binding domain FK537_08965 PF02817 e3 binding domain FK537_08965 PF00364 Biotin-requiring enzyme FK537_08965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FK537_08970 PF01169 Uncharacterized protein family UPF0016 FK537_08975 PF01613 Flavin reductase like domain FK537_08975 PF00258 Flavodoxin FK537_08980 PF03692 Putative zinc- or iron-chelating domain FK537_08985 PF00571 CBS domain FK537_08985 PF00478 IMP dehydrogenase / GMP reductase domain FK537_08990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FK537_08990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FK537_08990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FK537_08990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FK537_08995 PF01243 Pyridoxamine 5'-phosphate oxidase FK537_08995 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FK537_09000 PF02272 DHHA1 domain FK537_09000 PF17768 RecJ OB domain FK537_09000 PF01368 DHH family FK537_09020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FK537_09025 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FK537_09030 PF04452 RNA methyltransferase FK537_09035 PF00924 Mechanosensitive ion channel FK537_09040 PF16177 Acetyl-coenzyme A synthetase N-terminus FK537_09040 PF13193 AMP-binding enzyme C-terminal domain FK537_09040 PF00501 AMP-binding enzyme FK537_09045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FK537_09045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_09055 PF03358 NADPH-dependent FMN reductase FK537_09060 PF00196 Bacterial regulatory proteins, luxR family FK537_09060 PF00072 Response regulator receiver domain FK537_09070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_09070 PF09308 LuxQ, periplasmic FK537_09070 PF00072 Response regulator receiver domain FK537_09070 PF00512 His Kinase A (phospho-acceptor) domain FK537_09075 PF04341 Protein of unknown function, DUF485 FK537_09080 PF00474 Sodium:solute symporter family FK537_09100 PF02028 BCCT, betaine/carnitine/choline family transporter FK537_09110 PF00990 Diguanylate cyclase, GGDEF domain FK537_09110 PF08448 PAS fold FK537_09115 PF17760 UvrA interaction domain FK537_09115 PF17755 UvrA DNA-binding domain FK537_09115 PF00005 ABC transporter FK537_09120 PF03070 TENA/THI-4/PQQC family FK537_09130 PF07690 Major Facilitator Superfamily FK537_09135 PF00436 Single-strand binding protein family FK537_09140 PF00578 AhpC/TSA family FK537_09140 PF10417 C-terminal domain of 1-Cys peroxiredoxin FK537_09145 PF02678 Pirin FK537_09145 PF05726 Pirin C-terminal cupin domain FK537_09150 PF01593 Flavin containing amine oxidoreductase FK537_09175 PF02705 K+ potassium transporter FK537_09195 PF00230 Major intrinsic protein FK537_09200 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FK537_09200 PF12833 Helix-turn-helix domain FK537_09210 PF00977 Histidine biosynthesis protein FK537_09215 PF01636 Phosphotransferase enzyme family FK537_09230 PF00892 EamA-like transporter family FK537_09240 PF00977 Histidine biosynthesis protein FK537_09255 PF00117 Glutamine amidotransferase class-I FK537_09260 PF00475 Imidazoleglycerol-phosphate dehydratase FK537_09285 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FK537_09285 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FK537_09290 PF00672 HAMP domain FK537_09290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_09290 PF00512 His Kinase A (phospho-acceptor) domain FK537_09295 PF00486 Transcriptional regulatory protein, C terminal FK537_09295 PF00072 Response regulator receiver domain FK537_09300 PF00575 S1 RNA binding domain FK537_09300 PF17674 HHH domain FK537_09300 PF09371 Tex-like protein N-terminal domain FK537_09300 PF16921 Tex protein YqgF-like domain FK537_09310 PF00106 short chain dehydrogenase FK537_09315 PF01053 Cys/Met metabolism PLP-dependent enzyme FK537_09320 PF12848 ABC transporter FK537_09320 PF00005 ABC transporter FK537_09340 PF00749 tRNA synthetases class I (E and Q), catalytic domain FK537_09355 PF01795 MraW methylase family FK537_09365 PF00905 Penicillin binding protein transpeptidase domain FK537_09365 PF03717 Penicillin-binding Protein dimerisation domain FK537_09370 PF01225 Mur ligase family, catalytic domain FK537_09370 PF02875 Mur ligase family, glutamate ligase domain FK537_09370 PF08245 Mur ligase middle domain FK537_09375 PF02875 Mur ligase family, glutamate ligase domain FK537_09375 PF08245 Mur ligase middle domain FK537_09375 PF01225 Mur ligase family, catalytic domain FK537_09380 PF00953 Glycosyl transferase family 4 FK537_09385 PF13847 Methyltransferase domain FK537_09390 PF00905 Penicillin binding protein transpeptidase domain FK537_09390 PF17092 Penicillin-binding protein OB-like domain FK537_09390 PF00912 Transglycosylase FK537_09415 PF11741 AMIN domain FK537_09415 PF03958 Bacterial type II/III secretion system short domain FK537_09415 PF07660 Secretin and TonB N terminus short domain FK537_09415 PF00263 Bacterial type II and III secretion system protein FK537_09420 PF01202 Shikimate kinase FK537_09425 PF01761 3-dehydroquinate synthase FK537_09435 PF01493 GXGXG motif FK537_09435 PF04898 Glutamate synthase central domain FK537_09435 PF00310 Glutamine amidotransferases class-II FK537_09435 PF01645 Conserved region in glutamate synthase FK537_09440 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_09440 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FK537_09450 PF04011 LemA family FK537_09455 PF04536 TPM domain FK537_09465 PF07963 Prokaryotic N-terminal methylation motif FK537_09465 PF00114 Pilin (bacterial filament) FK537_09475 PF15864 Protein glycosylation ligase FK537_09475 PF04932 O-Antigen ligase FK537_09475 PF11846 Virulence factor membrane-bound polymerase, C-terminal FK537_09480 PF00210 Ferritin-like domain FK537_09485 PF04324 BFD-like [2Fe-2S] binding domain FK537_09490 PF01042 Endoribonuclease L-PSP FK537_09495 PF02824 TGS domain FK537_09495 PF04607 Region found in RelA / SpoT proteins FK537_09495 PF13291 ACT domain FK537_09500 PF01192 RNA polymerase Rpb6 FK537_09505 PF00625 Guanylate kinase FK537_09510 PF02401 LytB protein FK537_09515 PF00114 Pilin (bacterial filament) FK537_09515 PF07963 Prokaryotic N-terminal methylation motif FK537_09550 PF00886 Ribosomal protein S16 FK537_09555 PF01782 RimM N-terminal domain FK537_09555 PF05239 PRC-barrel domain FK537_09560 PF01746 tRNA (Guanine-1)-methyltransferase FK537_09565 PF01245 Ribosomal protein L19 FK537_09575 PF00561 alpha/beta hydrolase fold FK537_09580 PF00561 alpha/beta hydrolase fold FK537_09585 PF03280 Proteobacterial lipase chaperone protein FK537_09590 PF01509 TruB family pseudouridylate synthase (N terminal domain) FK537_09590 PF16198 tRNA pseudouridylate synthase B C-terminal domain FK537_09590 PF09157 Pseudouridine synthase II TruB, C-terminal FK537_09595 PF01925 Sulfite exporter TauE/SafE FK537_09605 PF00892 EamA-like transporter family FK537_09610 PF00892 EamA-like transporter family FK537_09615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FK537_09615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FK537_09620 PF02913 FAD linked oxidases, C-terminal domain FK537_09620 PF01565 FAD binding domain FK537_09630 PF07690 Major Facilitator Superfamily FK537_09635 PF12823 Domain of unknown function (DUF3817) FK537_09640 PF00080 Copper/zinc superoxide dismutase (SODC) FK537_09645 PF01594 AI-2E family transporter FK537_09650 PF13614 AAA domain FK537_09665 PF01209 ubiE/COQ5 methyltransferase family FK537_09685 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FK537_09690 PF01197 Ribosomal protein L31 FK537_09695 PF03109 ABC1 family FK537_09700 PF01554 MatE FK537_09710 PF04055 Radical SAM superfamily FK537_09710 PF06969 HemN C-terminal domain FK537_09715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_09715 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_09715 PF12806 Acetyl-CoA dehydrogenase C-terminal like FK537_09715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_09720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FK537_09720 PF01488 Shikimate / quinate 5-dehydrogenase FK537_09720 PF08501 Shikimate dehydrogenase substrate binding domain FK537_09735 PF04055 Radical SAM superfamily FK537_09735 PF06969 HemN C-terminal domain FK537_09740 PF00925 GTP cyclohydrolase II FK537_09745 PF02780 Transketolase, C-terminal domain FK537_09745 PF02779 Transketolase, pyrimidine binding domain FK537_09745 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FK537_09750 PF00459 Inositol monophosphatase family FK537_09755 PF12343 Cold shock protein DEAD box A FK537_09755 PF00270 DEAD/DEAH box helicase FK537_09755 PF03880 DbpA RNA binding domain FK537_09755 PF00271 Helicase conserved C-terminal domain FK537_09760 PF00005 ABC transporter FK537_09765 PF02405 Permease MlaE FK537_09770 PF02470 MlaD protein FK537_09775 PF05494 MlaC protein FK537_09785 PF01544 CorA-like Mg2+ transporter protein FK537_09790 PF03641 Possible lysine decarboxylase FK537_09800 PF00156 Phosphoribosyl transferase domain FK537_09805 PF00271 Helicase conserved C-terminal domain FK537_09805 PF00270 DEAD/DEAH box helicase FK537_09805 PF17191 RecG wedge domain FK537_09815 PF01553 Acyltransferase FK537_09825 PF00375 Sodium:dicarboxylate symporter family FK537_09840 PF00145 C-5 cytosine-specific DNA methylase FK537_09840 PF13411 MerR HTH family regulatory protein FK537_09845 PF01385 Probable transposase FK537_09845 PF07282 Putative transposase DNA-binding domain FK537_09845 PF12323 Helix-turn-helix domain FK537_09850 PF01926 50S ribosome-binding GTPase FK537_09855 PF02082 Transcriptional regulator FK537_09860 PF00175 Oxidoreductase NAD-binding domain FK537_09860 PF00042 Globin FK537_09860 PF00970 Oxidoreductase FAD-binding domain FK537_09865 PF05872 Bacterial protein of unknown function (DUF853) FK537_09875 PF01053 Cys/Met metabolism PLP-dependent enzyme FK537_09880 PF00117 Glutamine amidotransferase class-I FK537_09885 PF00338 Ribosomal protein S10p/S20e FK537_09890 PF00297 Ribosomal protein L3 FK537_09895 PF00573 Ribosomal protein L4/L1 family FK537_09900 PF00276 Ribosomal protein L23 FK537_09905 PF00181 Ribosomal Proteins L2, RNA binding domain FK537_09905 PF03947 Ribosomal Proteins L2, C-terminal domain FK537_09910 PF00203 Ribosomal protein S19 FK537_09915 PF00237 Ribosomal protein L22p/L17e FK537_09920 PF00189 Ribosomal protein S3, C-terminal domain FK537_09920 PF07650 KH domain FK537_09925 PF00252 Ribosomal protein L16p/L10e FK537_09930 PF00831 Ribosomal L29 protein FK537_09935 PF00366 Ribosomal protein S17 FK537_09940 PF00238 Ribosomal protein L14p/L23e FK537_09945 PF00467 KOW motif FK537_09945 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FK537_09950 PF00673 ribosomal L5P family C-terminus FK537_09950 PF00281 Ribosomal protein L5 FK537_09955 PF00253 Ribosomal protein S14p/S29e FK537_09960 PF00410 Ribosomal protein S8 FK537_09965 PF00347 Ribosomal protein L6 FK537_09970 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FK537_09975 PF03719 Ribosomal protein S5, C-terminal domain FK537_09975 PF00333 Ribosomal protein S5, N-terminal domain FK537_09980 PF00327 Ribosomal protein L30p/L7e FK537_09985 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FK537_09990 PF00344 SecY translocase FK537_09995 PF00444 Ribosomal protein L36 FK537_10000 PF00416 Ribosomal protein S13/S18 FK537_10005 PF00411 Ribosomal protein S11 FK537_10010 PF01479 S4 domain FK537_10010 PF00163 Ribosomal protein S4/S9 N-terminal domain FK537_10015 PF01000 RNA polymerase Rpb3/RpoA insert domain FK537_10015 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FK537_10015 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FK537_10020 PF01196 Ribosomal protein L17 FK537_10025 PF00743 Flavin-binding monooxygenase-like FK537_10030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_10030 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_10030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_10035 PF03937 Flavinator of succinate dehydrogenase FK537_10055 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FK537_10060 PF00892 EamA-like transporter family FK537_10070 PF09526 Probable metal-binding protein (DUF2387) FK537_10075 PF01432 Peptidase family M3 FK537_10080 PF17876 Cold shock domain FK537_10080 PF00575 S1 RNA binding domain FK537_10080 PF08461 Ribonuclease R winged-helix domain FK537_10080 PF08206 Ribonuclease B OB domain FK537_10080 PF00773 RNB domain FK537_10115 PF01557 Fumarylacetoacetate (FAA) hydrolase family FK537_10120 PF01625 Peptide methionine sulfoxide reductase FK537_10135 PF00186 Dihydrofolate reductase FK537_10140 PF00303 Thymidylate synthase FK537_10145 PF08212 Lipocalin-like domain FK537_10160 PF01790 Prolipoprotein diacylglyceryl transferase FK537_10175 PF00902 Sec-independent protein translocase protein (TatC) FK537_10180 PF02416 mttA/Hcf106 family FK537_10185 PF02416 mttA/Hcf106 family FK537_10195 PF01725 Ham1 family FK537_10205 PF00561 alpha/beta hydrolase fold FK537_10205 PF07021 Methionine biosynthesis protein MetW FK537_10210 PF00561 alpha/beta hydrolase fold FK537_10215 PF08502 LeuA allosteric (dimerisation) domain FK537_10215 PF00682 HMGL-like FK537_10220 PF01070 FMN-dependent dehydrogenase FK537_10225 PF18331 PKHD-type hydroxylase C-terminal domain FK537_10225 PF13640 2OG-Fe(II) oxygenase superfamily FK537_10230 PF07715 TonB-dependent Receptor Plug Domain FK537_10230 PF00593 TonB dependent receptor FK537_10235 PF07715 TonB-dependent Receptor Plug Domain FK537_10235 PF00593 TonB dependent receptor FK537_10240 PF05697 Bacterial trigger factor protein (TF) FK537_10240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FK537_10240 PF05698 Bacterial trigger factor protein (TF) C-terminus FK537_10245 PF00574 Clp protease FK537_10250 PF06689 ClpX C4-type zinc finger FK537_10250 PF10431 C-terminal, D2-small domain, of ClpB protein FK537_10250 PF07724 AAA domain (Cdc48 subfamily) FK537_10275 PF05681 Fumarate hydratase (Fumerase) FK537_10275 PF05683 Fumarase C-terminus FK537_10300 PF01515 Phosphate acetyl/butaryl transferase FK537_10300 PF07085 DRTGG domain FK537_10305 PF00871 Acetokinase family FK537_10315 PF00171 Aldehyde dehydrogenase family FK537_10330 PF00933 Glycosyl hydrolase family 3 N terminal domain FK537_10335 PF11818 C-terminal domain of tail specific protease (DUF3340) FK537_10335 PF00595 PDZ domain FK537_10335 PF03572 Peptidase family S41 FK537_10335 PF17804 Tail specific protease N-terminal domain FK537_10340 PF00990 Diguanylate cyclase, GGDEF domain FK537_10340 PF03707 Bacterial signalling protein N terminal repeat FK537_10340 PF00563 EAL domain FK537_10345 PF07715 TonB-dependent Receptor Plug Domain FK537_10345 PF00593 TonB dependent receptor FK537_10355 PF13737 Transposase DDE domain FK537_10385 PF16658 Class II release factor RF3, C-terminal domain FK537_10385 PF03144 Elongation factor Tu domain 2 FK537_10385 PF00009 Elongation factor Tu GTP binding domain FK537_10400 PF01026 TatD related DNase FK537_10405 PF00899 ThiF family FK537_10410 PF13006 Insertion element 4 transposase N-terminal FK537_10410 PF01609 Transposase DDE domain FK537_10415 PF01207 Dihydrouridine synthase (Dus) FK537_10425 PF06628 Catalase-related immune-responsive FK537_10425 PF18011 C-terminal domain found in long catalases FK537_10425 PF00199 Catalase FK537_10435 PF00994 Probable molybdopterin binding domain FK537_10435 PF02464 Competence-damaged protein FK537_10435 PF18146 Damage-inducible protein CinA KH domain FK537_10455 PF07690 Major Facilitator Superfamily FK537_10460 PF00892 EamA-like transporter family FK537_10465 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FK537_10465 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FK537_10470 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FK537_10475 PF02233 NAD(P) transhydrogenase beta subunit FK537_10485 PF01261 Xylose isomerase-like TIM barrel FK537_10490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FK537_10490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FK537_10495 PF00378 Enoyl-CoA hydratase/isomerase FK537_10500 PF00672 HAMP domain FK537_10500 PF00512 His Kinase A (phospho-acceptor) domain FK537_10500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FK537_10500 PF01627 Hpt domain FK537_10500 PF00072 Response regulator receiver domain FK537_10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_10505 PF00291 Pyridoxal-phosphate dependent enzyme FK537_10515 PF05958 tRNA (Uracil-5-)-methyltransferase FK537_10520 PF04607 Region found in RelA / SpoT proteins FK537_10520 PF13291 ACT domain FK537_10520 PF02824 TGS domain FK537_10525 PF01648 4'-phosphopantetheinyl transferase superfamily FK537_10530 PF07549 SecD/SecF GG Motif FK537_10530 PF02355 Protein export membrane protein FK537_10535 PF13721 SecD export protein N-terminal TM region FK537_10535 PF02355 Protein export membrane protein FK537_10535 PF07549 SecD/SecF GG Motif FK537_10540 PF02699 Preprotein translocase subunit FK537_10545 PF01702 Queuine tRNA-ribosyltransferase FK537_10555 PF04011 LemA family FK537_10565 PF02547 Queuosine biosynthesis protein FK537_10575 PF03971 Monomeric isocitrate dehydrogenase FK537_10580 PF13006 Insertion element 4 transposase N-terminal FK537_10580 PF01609 Transposase DDE domain FK537_10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_10585 PF13426 PAS domain FK537_10585 PF00989 PAS fold FK537_10585 PF13188 PAS domain FK537_10585 PF00512 His Kinase A (phospho-acceptor) domain FK537_10590 PF03710 Glutamate-ammonia ligase adenylyltransferase FK537_10590 PF08335 GlnD PII-uridylyltransferase FK537_10595 PF01063 Amino-transferase class IV FK537_10600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FK537_10600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FK537_10620 PF00534 Glycosyl transferases group 1 FK537_10620 PF13439 Glycosyltransferase Family 4 FK537_10645 PF01336 OB-fold nucleic acid binding domain FK537_10645 PF00152 tRNA synthetases class II (D, K and N) FK537_10645 PF02938 GAD domain FK537_10655 PF00593 TonB dependent receptor FK537_10655 PF07715 TonB-dependent Receptor Plug Domain FK537_10675 PF06146 Phosphate-starvation-inducible E FK537_10695 PF13006 Insertion element 4 transposase N-terminal FK537_10695 PF01609 Transposase DDE domain FK537_10705 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_10705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_10705 PF12806 Acetyl-CoA dehydrogenase C-terminal like FK537_10705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_10710 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_10710 PF12806 Acetyl-CoA dehydrogenase C-terminal like FK537_10710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_10710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_10720 PF00512 His Kinase A (phospho-acceptor) domain FK537_10720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_10720 PF00672 HAMP domain FK537_10725 PF00486 Transcriptional regulatory protein, C terminal FK537_10725 PF00072 Response regulator receiver domain FK537_10735 PF04237 YjbR FK537_10740 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FK537_10745 PF13006 Insertion element 4 transposase N-terminal FK537_10745 PF01609 Transposase DDE domain FK537_10765 PF01923 Cobalamin adenosyltransferase FK537_10770 PF00593 TonB dependent receptor FK537_10770 PF07715 TonB-dependent Receptor Plug Domain FK537_10775 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FK537_10780 PF00291 Pyridoxal-phosphate dependent enzyme FK537_10810 PF00290 Tryptophan synthase alpha chain FK537_10815 PF01039 Carboxyl transferase domain FK537_10820 PF02875 Mur ligase family, glutamate ligase domain FK537_10820 PF08245 Mur ligase middle domain FK537_10835 PF10417 C-terminal domain of 1-Cys peroxiredoxin FK537_10835 PF00578 AhpC/TSA family FK537_10840 PF07516 SecA Wing and Scaffold domain FK537_10840 PF02810 SEC-C motif FK537_10840 PF01043 SecA preprotein cross-linking domain FK537_10840 PF07517 SecA DEAD-like domain FK537_10855 PF01960 ArgJ family FK537_10860 PF02445 Quinolinate synthetase A protein FK537_10885 PF00691 OmpA family FK537_10885 PF04972 BON domain FK537_10890 PF00990 Diguanylate cyclase, GGDEF domain FK537_10890 PF17152 Periplasmic sensor domain FK537_10930 PF00309 Sigma-54 factor, Activator interacting domain (AID) FK537_10930 PF04552 Sigma-54, DNA binding domain FK537_10930 PF04963 Sigma-54 factor, core binding domain FK537_10935 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FK537_10940 PF01722 BolA-like protein FK537_10945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FK537_10950 PF01634 ATP phosphoribosyltransferase FK537_10955 PF00815 Histidinol dehydrogenase FK537_10960 PF00155 Aminotransferase class I and II FK537_10965 PF00425 chorismate binding enzyme FK537_10965 PF04715 Anthranilate synthase component I, N terminal region FK537_11005 PF00293 NUDIX domain FK537_11010 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_11015 PF00814 Glycoprotease family FK537_11020 PF02673 Bacitracin resistance protein BacA FK537_11025 PF04445 Putative SAM-dependent methyltransferase FK537_11035 PF00756 Putative esterase FK537_11040 PF05987 Bacterial protein of unknown function (DUF898) FK537_11055 PF00834 Ribulose-phosphate 3 epimerase family FK537_11065 PF00394 Multicopper oxidase FK537_11065 PF07731 Multicopper oxidase FK537_11065 PF07732 Multicopper oxidase FK537_11075 PF00893 Small Multidrug Resistance protein FK537_11080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FK537_11080 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FK537_11095 PF03070 TENA/THI-4/PQQC family FK537_11095 PF02581 Thiamine monophosphate synthase FK537_11095 PF08543 Phosphomethylpyrimidine kinase FK537_11100 PF13419 Haloacid dehalogenase-like hydrolase FK537_11105 PF01037 Lrp/AsnC ligand binding domain FK537_11110 PF01266 FAD dependent oxidoreductase FK537_11115 PF01168 Alanine racemase, N-terminal domain FK537_11115 PF00842 Alanine racemase, C-terminal domain FK537_11120 PF01042 Endoribonuclease L-PSP FK537_11125 PF00324 Amino acid permease FK537_11135 PF02801 Beta-ketoacyl synthase, C-terminal domain FK537_11135 PF00109 Beta-ketoacyl synthase, N-terminal domain FK537_11145 PF00164 Ribosomal protein S12/S23 FK537_11150 PF00177 Ribosomal protein S7p/S5e FK537_11155 PF00679 Elongation factor G C-terminus FK537_11155 PF00009 Elongation factor Tu GTP binding domain FK537_11155 PF03144 Elongation factor Tu domain 2 FK537_11155 PF03764 Elongation factor G, domain IV FK537_11155 PF14492 Elongation Factor G, domain II FK537_11160 PF03143 Elongation factor Tu C-terminal domain FK537_11160 PF03144 Elongation factor Tu domain 2 FK537_11160 PF00009 Elongation factor Tu GTP binding domain FK537_11170 PF00583 Acetyltransferase (GNAT) family FK537_11175 PF04376 Arginine-tRNA-protein transferase, N terminus FK537_11175 PF04377 Arginine-tRNA-protein transferase, C terminus FK537_11180 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FK537_11185 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_11190 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FK537_11190 PF17854 FtsK alpha domain FK537_11190 PF09397 Ftsk gamma domain FK537_11190 PF01580 FtsK/SpoIIIE family FK537_11200 PF03776 Septum formation topological specificity factor MinE FK537_11205 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FK537_11210 PF03775 Septum formation inhibitor MinC, C-terminal domain FK537_11220 PF01553 Acyltransferase FK537_11225 PF00691 OmpA family FK537_11225 PF13488 Glycine zipper FK537_11230 PF00580 UvrD/REP helicase N-terminal domain FK537_11230 PF13361 UvrD-like helicase C-terminal domain FK537_11235 PF00692 dUTPase FK537_11240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FK537_11240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FK537_11240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FK537_11240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FK537_11245 PF00696 Amino acid kinase family FK537_11255 PF13230 Glutamine amidotransferases class-II FK537_11260 PF01814 Hemerythrin HHE cation binding domain FK537_11270 PF03658 RnfH family Ubiquitin FK537_11275 PF04355 SmpA / OmlA family FK537_11280 PF01475 Ferric uptake regulator family FK537_11285 PF00437 Type II/IV secretion system protein FK537_11290 PF00437 Type II/IV secretion system protein FK537_11295 PF01168 Alanine racemase, N-terminal domain FK537_11310 PF12320 Type 5 capsule protein repressor C-terminal domain FK537_11310 PF00149 Calcineurin-like phosphoesterase FK537_11320 PF01266 FAD dependent oxidoreductase FK537_11325 PF00490 Delta-aminolevulinic acid dehydratase FK537_11330 PF03061 Thioesterase superfamily FK537_11335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FK537_11335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FK537_11345 PF13356 Arm DNA-binding domain FK537_11345 PF00589 Phage integrase family FK537_11410 PF09313 Domain of unknown function (DUF1971) FK537_11410 PF03848 Tellurite resistance protein TehB FK537_11465 PF02661 Fic/DOC family FK537_11465 PF13784 Fic/DOC family N-terminal FK537_11485 PF00873 AcrB/AcrD/AcrF family FK537_11490 PF01545 Cation efflux family FK537_11505 PF03848 Tellurite resistance protein TehB FK537_11505 PF09313 Domain of unknown function (DUF1971) FK537_11520 PF01522 Polysaccharide deacetylase FK537_11520 PF14883 Hypothetical glycosyl hydrolase family 13 FK537_11525 PF00535 Glycosyl transferase family 2 FK537_11540 PF05992 SbmA/BacA-like family FK537_11570 PF02934 GatB/GatE catalytic domain FK537_11570 PF02637 GatB domain FK537_11575 PF01425 Amidase FK537_11580 PF02686 Glu-tRNAGln amidotransferase C subunit FK537_11590 PF04085 rod shape-determining protein MreC FK537_11595 PF04093 rod shape-determining protein MreD FK537_11600 PF02545 Maf-like protein FK537_11605 PF00575 S1 RNA binding domain FK537_11605 PF10150 Ribonuclease E/G family FK537_11610 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FK537_11610 PF06974 Protein of unknown function (DUF1298) FK537_11615 PF01507 Phosphoadenosine phosphosulfate reductase family FK537_11635 PF01144 Coenzyme A transferase FK537_11640 PF01144 Coenzyme A transferase FK537_11650 PF14497 Glutathione S-transferase, C-terminal domain FK537_11650 PF02798 Glutathione S-transferase, N-terminal domain FK537_11675 PF00324 Amino acid permease FK537_11680 PF04303 PrpF protein FK537_11685 PF00348 Polyprenyl synthetase FK537_11695 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FK537_11700 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FK537_11705 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FK537_11705 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FK537_11715 PF10531 SLBB domain FK537_11715 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FK537_11715 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FK537_11720 PF00384 Molybdopterin oxidoreductase FK537_11720 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FK537_11720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FK537_11725 PF00146 NADH dehydrogenase FK537_11730 PF12838 4Fe-4S dicluster domain FK537_11735 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FK537_11740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FK537_11745 PF00361 Proton-conducting membrane transporter FK537_11745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FK537_11750 PF00361 Proton-conducting membrane transporter FK537_11755 PF00361 Proton-conducting membrane transporter FK537_11765 PF00313 'Cold-shock' DNA-binding domain FK537_11770 PF00313 'Cold-shock' DNA-binding domain FK537_11775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_11775 PF03466 LysR substrate binding domain FK537_11780 PF00970 Oxidoreductase FAD-binding domain FK537_11780 PF00175 Oxidoreductase NAD-binding domain FK537_11800 PF05552 Conserved TM helix FK537_11825 PF00291 Pyridoxal-phosphate dependent enzyme FK537_11840 PF00909 Ammonium Transporter Family FK537_11855 PF01588 Putative tRNA binding domain FK537_11855 PF09334 tRNA synthetases class I (M) FK537_11860 PF10609 NUBPL iron-transfer P-loop NTPase FK537_11875 PF16868 NMT1-like family FK537_11885 PF00692 dUTPase FK537_11910 PF04073 Aminoacyl-tRNA editing domain FK537_11910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FK537_11910 PF03129 Anticodon binding domain FK537_11915 PF00873 AcrB/AcrD/AcrF family FK537_11920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FK537_11930 PF00072 Response regulator receiver domain FK537_11935 PF00072 Response regulator receiver domain FK537_11940 PF01584 CheW-like domain FK537_11945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FK537_11945 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FK537_11950 PF00072 Response regulator receiver domain FK537_11950 PF01584 CheW-like domain FK537_11950 PF02895 Signal transducing histidine kinase, homodimeric domain FK537_11950 PF01627 Hpt domain FK537_11950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_11960 PF01546 Peptidase family M20/M25/M40 FK537_11960 PF07687 Peptidase dimerisation domain FK537_11965 PF08085 Entericidin EcnA/B family FK537_11975 PF04304 Protein of unknown function (DUF454) FK537_11980 PF01476 LysM domain FK537_11980 PF03734 L,D-transpeptidase catalytic domain FK537_12035 PF00175 Oxidoreductase NAD-binding domain FK537_12035 PF00667 FAD binding domain FK537_12035 PF00258 Flavodoxin FK537_12045 PF12805 FUSC-like inner membrane protein yccS FK537_12050 PF07690 Major Facilitator Superfamily FK537_12055 PF00881 Nitroreductase family FK537_12065 PF03616 Sodium/glutamate symporter FK537_12070 PF01235 Sodium:alanine symporter family FK537_12075 PF02417 Chromate transporter FK537_12080 PF01734 Patatin-like phospholipase FK537_12090 PF03061 Thioesterase superfamily FK537_12095 PF16859 Tetracyclin repressor-like, C-terminal domain FK537_12095 PF00440 Bacterial regulatory proteins, tetR family FK537_12100 PF07690 Major Facilitator Superfamily FK537_12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_12105 PF03466 LysR substrate binding domain FK537_12115 PF01494 FAD binding domain FK537_12125 PF07683 Cobalamin synthesis protein cobW C-terminal domain FK537_12125 PF02492 CobW/HypB/UreG, nucleotide-binding domain FK537_12130 PF07152 YaeQ protein FK537_12135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FK537_12140 PF00990 Diguanylate cyclase, GGDEF domain FK537_12170 PF07690 Major Facilitator Superfamily FK537_12170 PF00083 Sugar (and other) transporter FK537_12175 PF00990 Diguanylate cyclase, GGDEF domain FK537_12175 PF17151 Periplasmic sensor domain FK537_12180 PF04960 Glutaminase FK537_12185 PF02733 Dak1 domain FK537_12205 PF02607 B12 binding domain FK537_12205 PF02965 Vitamin B12 dependent methionine synthase, activation domain FK537_12205 PF00809 Pterin binding enzyme FK537_12205 PF02574 Homocysteine S-methyltransferase FK537_12205 PF02310 B12 binding domain FK537_12210 PF01384 Phosphate transporter family FK537_12230 PF01521 Iron-sulphur cluster biosynthesis FK537_12230 PF01106 NifU-like domain FK537_12235 PF07715 TonB-dependent Receptor Plug Domain FK537_12235 PF00593 TonB dependent receptor FK537_12245 PF00561 alpha/beta hydrolase fold FK537_12250 PF00484 Carbonic anhydrase FK537_12255 PF13472 GDSL-like Lipase/Acylhydrolase family FK537_12260 PF00005 ABC transporter FK537_12270 PF01694 Rhomboid family FK537_12275 PF00912 Transglycosylase FK537_12280 PF13090 Polyphosphate kinase C-terminal domain 2 FK537_12280 PF17941 Polyphosphate kinase C-terminal domain 1 FK537_12280 PF02503 Polyphosphate kinase middle domain FK537_12280 PF13089 Polyphosphate kinase N-terminal domain FK537_12285 PF03466 LysR substrate binding domain FK537_12285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_12290 PF00561 alpha/beta hydrolase fold FK537_12295 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_12295 PF18113 Rubredoxin binding C-terminal domain FK537_12300 PF00301 Rubredoxin FK537_12305 PF00156 Phosphoribosyl transferase domain FK537_12315 PF01336 OB-fold nucleic acid binding domain FK537_12315 PF00152 tRNA synthetases class II (D, K and N) FK537_12325 PF01507 Phosphoadenosine phosphosulfate reductase family FK537_12330 PF00009 Elongation factor Tu GTP binding domain FK537_12340 PF00085 Thioredoxin FK537_12345 PF16197 Ketoacyl-synthetase C-terminal extension FK537_12345 PF00109 Beta-ketoacyl synthase, N-terminal domain FK537_12345 PF02801 Beta-ketoacyl synthase, C-terminal domain FK537_12345 PF08659 KR domain FK537_12345 PF00550 Phosphopantetheine attachment site FK537_12345 PF00107 Zinc-binding dehydrogenase FK537_12345 PF08240 Alcohol dehydrogenase GroES-like domain FK537_12345 PF14765 Polyketide synthase dehydratase FK537_12345 PF00698 Acyl transferase domain FK537_12360 PF01595 Cyclin M transmembrane N-terminal domain FK537_12360 PF03471 Transporter associated domain FK537_12360 PF00571 CBS domain FK537_12365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_12365 PF03466 LysR substrate binding domain FK537_12370 PF00463 Isocitrate lyase family FK537_12380 PF17185 NlpE C-terminal OB domain FK537_12380 PF04170 NlpE N-terminal domain FK537_12385 PF01553 Acyltransferase FK537_12400 PF01774 UreD urease accessory protein FK537_12405 PF00547 Urease, gamma subunit FK537_12410 PF00699 Urease beta subunit FK537_12415 PF01979 Amidohydrolase family FK537_12415 PF00449 Urease alpha-subunit, N-terminal domain FK537_12425 PF02814 UreE urease accessory protein, N-terminal domain FK537_12425 PF05194 UreE urease accessory protein, C-terminal domain FK537_12430 PF01730 UreF FK537_12435 PF02492 CobW/HypB/UreG, nucleotide-binding domain FK537_12450 PF03717 Penicillin-binding Protein dimerisation domain FK537_12450 PF00905 Penicillin binding protein transpeptidase domain FK537_12465 PF05191 Adenylate kinase, active site lid FK537_12475 PF00730 HhH-GPD superfamily base excision DNA repair protein FK537_12475 PF00633 Helix-hairpin-helix motif FK537_12475 PF10576 Iron-sulfur binding domain of endonuclease III FK537_12480 PF04060 Putative Fe-S cluster FK537_12485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FK537_12485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FK537_12495 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FK537_12500 PF02590 Predicted SPOUT methyltransferase FK537_12505 PF04389 Peptidase family M28 FK537_12510 PF02190 ATP-dependent protease La (LON) substrate-binding domain FK537_12510 PF05362 Lon protease (S16) C-terminal proteolytic domain FK537_12510 PF00004 ATPase family associated with various cellular activities (AAA) FK537_12515 PF01812 5-formyltetrahydrofolate cyclo-ligase family FK537_12530 PF02652 L-lactate permease FK537_12535 PF07729 FCD domain FK537_12535 PF00392 Bacterial regulatory proteins, gntR family FK537_12540 PF01070 FMN-dependent dehydrogenase FK537_12545 PF01565 FAD binding domain FK537_12545 PF09330 D-lactate dehydrogenase, membrane binding FK537_12550 PF03466 LysR substrate binding domain FK537_12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_12575 PF03695 Uncharacterised protein family (UPF0149) FK537_12580 PF00557 Metallopeptidase family M24 FK537_12580 PF05195 Aminopeptidase P, N-terminal domain FK537_12590 PF01494 FAD binding domain FK537_12595 PF01494 FAD binding domain FK537_12605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FK537_12610 PF04348 LppC putative lipoprotein FK537_12615 PF02021 Uncharacterised protein family UPF0102 FK537_12620 PF04972 BON domain FK537_12625 PF00135 Carboxylesterase family FK537_12630 PF09297 NADH pyrophosphatase zinc ribbon domain FK537_12630 PF00293 NUDIX domain FK537_12640 PF00929 Exonuclease FK537_12645 PF01464 Transglycosylase SLT domain FK537_12645 PF01476 LysM domain FK537_12650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FK537_12655 PF00528 Binding-protein-dependent transport system inner membrane component FK537_12660 PF12911 N-terminal TM domain of oligopeptide transport permease C FK537_12660 PF00528 Binding-protein-dependent transport system inner membrane component FK537_12665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FK537_12665 PF00005 ABC transporter FK537_12670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FK537_12670 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_12695 PF00324 Amino acid permease FK537_12715 PF00929 Exonuclease FK537_12720 PF01979 Amidohydrolase family FK537_12725 PF00563 EAL domain FK537_12725 PF01590 GAF domain FK537_12725 PF00990 Diguanylate cyclase, GGDEF domain FK537_12725 PF00360 Phytochrome region FK537_12730 PF00764 Arginosuccinate synthase FK537_12740 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_12740 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FK537_12755 PF13737 Transposase DDE domain FK537_12760 PF00970 Oxidoreductase FAD-binding domain FK537_12760 PF00175 Oxidoreductase NAD-binding domain FK537_12760 PF00111 2Fe-2S iron-sulfur cluster binding domain FK537_12770 PF00403 Heavy-metal-associated domain FK537_12775 PF00376 MerR family regulatory protein FK537_12775 PF09278 MerR, DNA binding FK537_12785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FK537_12785 PF11890 Domain of unknown function (DUF3410) FK537_12785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FK537_12790 PF00152 tRNA synthetases class II (D, K and N) FK537_12795 PF01743 Poly A polymerase head domain FK537_12795 PF12627 Probable RNA and SrmB- binding site of polymerase A FK537_12800 PF01515 Phosphate acetyl/butaryl transferase FK537_12800 PF03949 Malic enzyme, NAD binding domain FK537_12800 PF00390 Malic enzyme, N-terminal domain FK537_12805 PF03707 Bacterial signalling protein N terminal repeat FK537_12805 PF00990 Diguanylate cyclase, GGDEF domain FK537_12805 PF00563 EAL domain FK537_12810 PF04452 RNA methyltransferase FK537_12815 PF02219 Methylenetetrahydrofolate reductase FK537_12820 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FK537_12820 PF05221 S-adenosyl-L-homocysteine hydrolase FK537_12855 PF09317 Domain of unknown function (DUF1974) FK537_12855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_12855 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_12855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_12860 PF04055 Radical SAM superfamily FK537_12865 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_12865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FK537_12870 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FK537_12885 PF00557 Metallopeptidase family M24 FK537_12890 PF00318 Ribosomal protein S2 FK537_12895 PF00889 Elongation factor TS FK537_12910 PF03330 Lytic transglycolase FK537_12910 PF05036 Sporulation related domain FK537_12915 PF13406 Transglycosylase SLT domain FK537_12925 PF14489 QueF-like protein FK537_12925 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FK537_12930 PF01061 ABC-2 type transporter FK537_12935 PF00005 ABC transporter FK537_12990 PF00464 Serine hydroxymethyltransferase FK537_12995 PF01272 Transcription elongation factor, GreA/GreB, C-term FK537_12995 PF14760 Rnk N-terminus FK537_13005 PF05816 Toxic anion resistance protein (TelA) FK537_13015 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_13015 PF13192 Thioredoxin domain FK537_13020 PF00037 4Fe-4S binding domain FK537_13030 PF03960 ArsC family FK537_13035 PF01022 Bacterial regulatory protein, arsR family FK537_13045 PF01758 Sodium Bile acid symporter family FK537_13050 PF03358 NADPH-dependent FMN reductase FK537_13055 PF13411 MerR HTH family regulatory protein FK537_13065 PF00175 Oxidoreductase NAD-binding domain FK537_13065 PF00970 Oxidoreductase FAD-binding domain FK537_13070 PF18389 TrmO C-terminal domain FK537_13070 PF01980 tRNA-methyltransferase O FK537_13080 PF00437 Type II/IV secretion system protein FK537_13080 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FK537_13090 PF00486 Transcriptional regulatory protein, C terminal FK537_13090 PF00072 Response regulator receiver domain FK537_13095 PF00512 His Kinase A (phospho-acceptor) domain FK537_13095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_13095 PF08521 Two-component sensor kinase N-terminal FK537_13105 PF00293 NUDIX domain FK537_13115 PF00912 Transglycosylase FK537_13115 PF00905 Penicillin binding protein transpeptidase domain FK537_13115 PF14814 Bifunctional transglycosylase second domain FK537_13120 PF01513 ATP-NAD kinase FK537_13125 PF07023 Protein of unknown function (DUF1315) FK537_13130 PF00591 Glycosyl transferase family, a/b domain FK537_13130 PF02885 Glycosyl transferase family, helical bundle domain FK537_13135 PF00375 Sodium:dicarboxylate symporter family FK537_13140 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_13140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_13140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_13145 PF01965 DJ-1/PfpI family FK537_13150 PF01842 ACT domain FK537_13150 PF01817 Chorismate mutase type II FK537_13150 PF00800 Prephenate dehydratase FK537_13155 PF00155 Aminotransferase class I and II FK537_13160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FK537_13175 PF03883 Peroxide stress protein YaaA FK537_13185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FK537_13190 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_13195 PF07943 Penicillin-binding protein 5, C-terminal domain FK537_13195 PF00768 D-alanyl-D-alanine carboxypeptidase FK537_13210 PF00849 RNA pseudouridylate synthase FK537_13215 PF00180 Isocitrate/isopropylmalate dehydrogenase FK537_13220 PF01551 Peptidase family M23 FK537_13235 PF01613 Flavin reductase like domain FK537_13240 PF02567 Phenazine biosynthesis-like protein FK537_13245 PF00675 Insulinase (Peptidase family M16) FK537_13245 PF05193 Peptidase M16 inactive domain FK537_13280 PF02581 Thiamine monophosphate synthase FK537_13285 PF00202 Aminotransferase class-III FK537_13290 PF03928 Haem-degrading FK537_13305 PF00849 RNA pseudouridylate synthase FK537_13310 PF18337 RapA N-terminal Tudor like domain FK537_13310 PF18339 RapA N-terminal Tudor like domain 1 FK537_13310 PF00176 SNF2 family N-terminal domain FK537_13310 PF12137 RNA polymerase recycling family C-terminal FK537_13310 PF00271 Helicase conserved C-terminal domain FK537_13320 PF12697 Alpha/beta hydrolase family FK537_13325 PF00440 Bacterial regulatory proteins, tetR family FK537_13330 PF00970 Oxidoreductase FAD-binding domain FK537_13330 PF00175 Oxidoreductase NAD-binding domain FK537_13330 PF00111 2Fe-2S iron-sulfur cluster binding domain FK537_13335 PF00487 Fatty acid desaturase FK537_13345 PF00691 OmpA family FK537_13345 PF01389 OmpA-like transmembrane domain FK537_13360 PF01695 IstB-like ATP binding protein FK537_13365 PF02796 Helix-turn-helix domain of resolvase FK537_13365 PF00665 Integrase core domain FK537_13370 PF13613 Helix-turn-helix of DDE superfamily endonuclease FK537_13370 PF13359 DDE superfamily endonuclease FK537_13385 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_13405 PF00534 Glycosyl transferases group 1 FK537_13405 PF09318 Glycosyl transferase 1 domain A FK537_13425 PF07759 Protein of unknown function (DUF1615) FK537_13440 PF00313 'Cold-shock' DNA-binding domain FK537_13445 PF01207 Dihydrouridine synthase (Dus) FK537_13455 PF03060 Nitronate monooxygenase FK537_13480 PF04143 Sulphur transport FK537_13490 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_13490 PF13192 Thioredoxin domain FK537_13505 PF15887 Putative zinc-binding metallo-peptidase FK537_13505 PF10005 zinc-ribbon domain FK537_13515 PF10417 C-terminal domain of 1-Cys peroxiredoxin FK537_13515 PF00578 AhpC/TSA family FK537_13520 PF00271 Helicase conserved C-terminal domain FK537_13520 PF11898 Domain of unknown function (DUF3418) FK537_13520 PF00270 DEAD/DEAH box helicase FK537_13520 PF04408 Helicase associated domain (HA2) FK537_13520 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FK537_13525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FK537_13525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FK537_13535 PF01406 tRNA synthetases class I (C) catalytic domain FK537_13535 PF09190 DALR domain FK537_13545 PF01380 SIS domain FK537_13545 PF00571 CBS domain FK537_13560 PF03968 OstA-like protein FK537_13565 PF00005 ABC transporter FK537_13565 PF12399 Branched-chain amino acid ATP-binding cassette transporter FK537_13570 PF02321 Outer membrane efflux protein FK537_13575 PF03412 Peptidase C39 family FK537_13575 PF00664 ABC transporter transmembrane region FK537_13575 PF00005 ABC transporter FK537_13580 PF00529 HlyD membrane-fusion protein of T1SS FK537_13585 PF01205 Uncharacterized protein family UPF0029 FK537_13600 PF01596 O-methyltransferase FK537_13610 PF11953 Domain of unknown function (DUF3470) FK537_13610 PF00037 4Fe-4S binding domain FK537_13615 PF01624 MutS domain I FK537_13615 PF05192 MutS domain III FK537_13615 PF05190 MutS family domain IV FK537_13615 PF05188 MutS domain II FK537_13615 PF00488 MutS domain V FK537_13620 PF00465 Iron-containing alcohol dehydrogenase FK537_13635 PF00132 Bacterial transferase hexapeptide (six repeats) FK537_13640 PF00588 SpoU rRNA Methylase family FK537_13645 PF01336 OB-fold nucleic acid binding domain FK537_13645 PF02811 PHP domain FK537_13645 PF14579 Helix-hairpin-helix motif FK537_13645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FK537_13645 PF07733 Bacterial DNA polymerase III alpha NTPase domain FK537_13650 PF00528 Binding-protein-dependent transport system inner membrane component FK537_13655 PF00005 ABC transporter FK537_13655 PF09383 NIL domain FK537_13660 PF03180 NLPA lipoprotein FK537_13670 PF02844 Phosphoribosylglycinamide synthetase, N domain FK537_13670 PF02843 Phosphoribosylglycinamide synthetase, C domain FK537_13670 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FK537_13675 PF02142 MGS-like domain FK537_13675 PF01808 AICARFT/IMPCHase bienzyme FK537_13680 PF02954 Bacterial regulatory protein, Fis family FK537_13710 PF01134 Glucose inhibited division protein A FK537_13710 PF13932 GidA associated domain FK537_13725 PF14403 Circularly permuted ATP-grasp type 2 FK537_13735 PF08379 Bacterial transglutaminase-like N-terminal region FK537_13735 PF01841 Transglutaminase-like superfamily FK537_13750 PF00842 Alanine racemase, C-terminal domain FK537_13750 PF01168 Alanine racemase, N-terminal domain FK537_13755 PF00772 DnaB-like helicase N terminal domain FK537_13755 PF03796 DnaB-like helicase C terminal domain FK537_13760 PF03948 Ribosomal protein L9, C-terminal domain FK537_13760 PF01281 Ribosomal protein L9, N-terminal domain FK537_13765 PF01084 Ribosomal protein S18 FK537_13770 PF01250 Ribosomal protein S6 FK537_13775 PF01040 UbiA prenyltransferase family FK537_13780 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FK537_13785 PF00510 Cytochrome c oxidase subunit III FK537_13790 PF00115 Cytochrome C and Quinol oxidase polypeptide I FK537_13795 PF06481 COX Aromatic Rich Motif FK537_13795 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FK537_13805 PF02896 PEP-utilising enzyme, TIM barrel domain FK537_13805 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FK537_13805 PF00391 PEP-utilising enzyme, mobile domain FK537_13810 PF03618 Kinase/pyrophosphorylase FK537_13820 PF00296 Luciferase-like monooxygenase FK537_13835 PF00472 RF-1 domain FK537_13835 PF03462 PCRF domain FK537_13840 PF05175 Methyltransferase small domain FK537_13840 PF17827 PrmC N-terminal domain FK537_13845 PF01062 Bestrophin, RFP-TM, chloride channel FK537_13860 PF00106 short chain dehydrogenase FK537_13865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_13865 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_13865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_13870 PF13193 AMP-binding enzyme C-terminal domain FK537_13870 PF00501 AMP-binding enzyme FK537_13880 PF00899 ThiF family FK537_13885 PF03109 ABC1 family FK537_13890 PF02152 Dihydroneopterin aldolase FK537_13905 PF03232 Ubiquinone biosynthesis protein COQ7 FK537_13910 PF07690 Major Facilitator Superfamily FK537_13915 PF01103 Surface antigen FK537_13915 PF17243 POTRA domain TamA domain 1 FK537_13915 PF07244 Surface antigen variable number repeat FK537_13940 PF11791 Aconitate B N-terminal domain FK537_13940 PF06434 Aconitate hydratase 2 N-terminus FK537_13940 PF00330 Aconitase family (aconitate hydratase) FK537_13955 PF03616 Sodium/glutamate symporter FK537_13970 PF02110 Hydroxyethylthiazole kinase family FK537_13985 PF01433 Peptidase family M1 domain FK537_13985 PF11940 Domain of unknown function (DUF3458) Ig-like fold FK537_13985 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FK537_13995 PF00582 Universal stress protein family FK537_14000 PF00582 Universal stress protein family FK537_14005 PF00135 Carboxylesterase family FK537_14010 PF03594 Benzoate membrane transport protein FK537_14015 PF01810 LysE type translocator FK537_14020 PF00923 Transaldolase/Fructose-6-phosphate aldolase FK537_14020 PF13202 EF hand FK537_14025 PF03466 LysR substrate binding domain FK537_14025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_14035 PF00108 Thiolase, N-terminal domain FK537_14035 PF02803 Thiolase, C-terminal domain FK537_14045 PF01575 MaoC like domain FK537_14050 PF00144 Beta-lactamase FK537_14060 PF12170 DNA polymerase III tau subunit V interacting with alpha FK537_14060 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FK537_14060 PF12169 DNA polymerase III subunits gamma and tau domain III FK537_14065 PF03061 Thioesterase superfamily FK537_14070 PF00465 Iron-containing alcohol dehydrogenase FK537_14075 PF01451 Low molecular weight phosphotyrosine protein phosphatase FK537_14080 PF01565 FAD binding domain FK537_14080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FK537_14095 PF01645 Conserved region in glutamate synthase FK537_14100 PF00072 Response regulator receiver domain FK537_14100 PF00196 Bacterial regulatory proteins, luxR family FK537_14105 PF07730 Histidine kinase FK537_14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_14110 PF08007 Cupin superfamily protein FK537_14115 PF02545 Maf-like protein FK537_14125 PF00162 Phosphoglycerate kinase FK537_14135 PF01116 Fructose-bisphosphate aldolase class-II FK537_14150 PF00881 Nitroreductase family FK537_14155 PF03328 HpcH/HpaI aldolase/citrate lyase family FK537_14160 PF00149 Calcineurin-like phosphoesterase FK537_14165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FK537_14170 PF00749 tRNA synthetases class I (E and Q), catalytic domain FK537_14170 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FK537_14180 PF09992 Phosphodiester glycosidase FK537_14195 PF05958 tRNA (Uracil-5-)-methyltransferase FK537_14200 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FK537_14200 PF14850 DNA-binding domain of Proline dehydrogenase FK537_14200 PF01619 Proline dehydrogenase FK537_14200 PF00171 Aldehyde dehydrogenase family FK537_14205 PF01037 Lrp/AsnC ligand binding domain FK537_14210 PF00474 Sodium:solute symporter family FK537_14215 PF10415 Fumarase C C-terminus FK537_14215 PF00206 Lyase FK537_14220 PF02146 Sir2 family FK537_14225 PF03466 LysR substrate binding domain FK537_14225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_14230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_14230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_14230 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_14250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FK537_14250 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_14265 PF13006 Insertion element 4 transposase N-terminal FK537_14265 PF01609 Transposase DDE domain FK537_14270 PF07690 Major Facilitator Superfamily FK537_14275 PF00248 Aldo/keto reductase family FK537_14280 PF03466 LysR substrate binding domain FK537_14280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_14290 PF06418 CTP synthase N-terminus FK537_14290 PF00117 Glutamine amidotransferase class-I FK537_14295 PF00793 DAHP synthetase I family FK537_14300 PF03952 Enolase, N-terminal domain FK537_14300 PF00113 Enolase, C-terminal TIM barrel domain FK537_14305 PF04977 Septum formation initiator FK537_14310 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FK537_14315 PF01098 Cell cycle protein FK537_14330 PF02631 RecX family FK537_14335 PF00154 recA bacterial DNA recombination protein FK537_14340 PF01479 S4 domain FK537_14345 PF13419 Haloacid dehalogenase-like hydrolase FK537_14350 PF00459 Inositol monophosphatase family FK537_14360 PF12561 ToxR activated gene A lipoprotein domain FK537_14360 PF00041 Fibronectin type III domain FK537_14365 PF01649 Ribosomal protein S20 FK537_14370 PF13460 NAD(P)H-binding FK537_14375 PF03737 Aldolase/RraA FK537_14390 PF02559 CarD-like/TRCF domain FK537_14390 PF00270 DEAD/DEAH box helicase FK537_14390 PF00271 Helicase conserved C-terminal domain FK537_14390 PF17757 UvrB interaction domain FK537_14390 PF03461 TRCF domain FK537_14400 PF00211 Adenylate and Guanylate cyclase catalytic domain FK537_14405 PF00111 2Fe-2S iron-sulfur cluster binding domain FK537_14410 PF00012 Hsp70 protein FK537_14415 PF00226 DnaJ domain FK537_14415 PF07743 HSCB C-terminal oligomerisation domain FK537_14420 PF01521 Iron-sulphur cluster biosynthesis FK537_14425 PF01592 NifU-like N terminal domain FK537_14430 PF00266 Aminotransferase class-V FK537_14435 PF02082 Transcriptional regulator FK537_14450 PF00216 Bacterial DNA-binding protein FK537_14455 PF05698 Bacterial trigger factor protein (TF) C-terminus FK537_14475 PF00267 Gram-negative porin FK537_14480 PF01230 HIT domain FK537_14490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FK537_14490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FK537_14500 PF01053 Cys/Met metabolism PLP-dependent enzyme FK537_14505 PF02575 YbaB/EbfC DNA-binding family FK537_14510 PF02132 RecR protein FK537_14510 PF13662 Toprim domain FK537_14515 PF01612 3'-5' exonuclease FK537_14515 PF00570 HRDC domain FK537_14520 PF05166 YcgL domain FK537_14530 PF00004 ATPase family associated with various cellular activities (AAA) FK537_14530 PF17862 AAA+ lid domain FK537_14530 PF01434 Peptidase family M41 FK537_14540 PF00291 Pyridoxal-phosphate dependent enzyme FK537_14545 PF01609 Transposase DDE domain FK537_14545 PF13006 Insertion element 4 transposase N-terminal FK537_14550 PF00571 CBS domain FK537_14550 PF01743 Poly A polymerase head domain FK537_14580 PF00675 Insulinase (Peptidase family M16) FK537_14580 PF05193 Peptidase M16 inactive domain FK537_14585 PF02881 SRP54-type protein, helical bundle domain FK537_14585 PF00448 SRP54-type protein, GTPase domain FK537_14630 PF01965 DJ-1/PfpI family FK537_14640 PF02690 Na+/Pi-cotransporter FK537_14645 PF04073 Aminoacyl-tRNA editing domain FK537_14650 PF04172 LrgB-like family FK537_14655 PF03788 LrgA family FK537_14660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_14660 PF03466 LysR substrate binding domain FK537_14680 PF02635 DsrE/DsrF-like family FK537_14685 PF16363 GDP-mannose 4,6 dehydratase FK537_14690 PF10415 Fumarase C C-terminus FK537_14690 PF00206 Lyase FK537_14710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_14710 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_14710 PF12806 Acetyl-CoA dehydrogenase C-terminal like FK537_14710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_14715 PF02311 AraC-like ligand binding domain FK537_14715 PF12833 Helix-turn-helix domain FK537_14720 PF07690 Major Facilitator Superfamily FK537_14725 PF01047 MarR family FK537_14730 PF01654 Cytochrome bd terminal oxidase subunit I FK537_14735 PF02322 Cytochrome bd terminal oxidase subunit II FK537_14745 PF00565 Staphylococcal nuclease homologue FK537_14750 PF03466 LysR substrate binding domain FK537_14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_14755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK537_14755 PF02770 Acyl-CoA dehydrogenase, middle domain FK537_14755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK537_14770 PF00106 short chain dehydrogenase FK537_14795 PF13091 PLD-like domain FK537_14800 PF08240 Alcohol dehydrogenase GroES-like domain FK537_14800 PF00107 Zinc-binding dehydrogenase FK537_14805 PF00563 EAL domain FK537_14805 PF03707 Bacterial signalling protein N terminal repeat FK537_14805 PF00990 Diguanylate cyclase, GGDEF domain FK537_14810 PF00155 Aminotransferase class I and II FK537_14815 PF00324 Amino acid permease FK537_14820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FK537_14825 PF00793 DAHP synthetase I family FK537_14830 PF00437 Type II/IV secretion system protein FK537_14835 PF07690 Major Facilitator Superfamily FK537_14840 PF01597 Glycine cleavage H-protein FK537_14845 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FK537_14845 PF12833 Helix-turn-helix domain FK537_14855 PF00005 ABC transporter FK537_14855 PF00664 ABC transporter transmembrane region FK537_14865 PF00924 Mechanosensitive ion channel FK537_14870 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FK537_14880 PF00375 Sodium:dicarboxylate symporter family FK537_14885 PF01740 STAS domain FK537_14885 PF00916 Sulfate permease family FK537_14895 PF01553 Acyltransferase FK537_14900 PF00291 Pyridoxal-phosphate dependent enzyme FK537_14905 PF00005 ABC transporter FK537_14915 PF07690 Major Facilitator Superfamily FK537_14920 PF18267 Rubredoxin NAD+ reductase C-terminal domain FK537_14920 PF04324 BFD-like [2Fe-2S] binding domain FK537_14920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FK537_14920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FK537_14920 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_14925 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK537_14925 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FK537_14925 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FK537_14925 PF04324 BFD-like [2Fe-2S] binding domain FK537_14925 PF18267 Rubredoxin NAD+ reductase C-terminal domain FK537_14930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FK537_14930 PF00384 Molybdopterin oxidoreductase FK537_14930 PF01568 Molydopterin dinucleotide binding domain FK537_14930 PF04324 BFD-like [2Fe-2S] binding domain FK537_14935 PF12804 MobA-like NTP transferase domain FK537_14940 PF04055 Radical SAM superfamily FK537_14940 PF06463 Molybdenum Cofactor Synthesis C FK537_14950 PF02391 MoaE protein FK537_14955 PF00994 Probable molybdopterin binding domain FK537_14955 PF01967 MoaC family FK537_14960 PF00994 Probable molybdopterin binding domain FK537_14960 PF03454 MoeA C-terminal region (domain IV) FK537_14960 PF03453 MoeA N-terminal region (domain I and II) FK537_14970 PF00528 Binding-protein-dependent transport system inner membrane component FK537_14975 PF03459 TOBE domain FK537_14975 PF00005 ABC transporter FK537_14980 PF03466 LysR substrate binding domain FK537_14980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_14985 PF00355 Rieske [2Fe-2S] domain FK537_14990 PF10005 zinc-ribbon domain FK537_14990 PF15887 Putative zinc-binding metallo-peptidase FK537_15000 PF12146 Serine aminopeptidase, S33 FK537_15005 PF02803 Thiolase, C-terminal domain FK537_15005 PF00108 Thiolase, N-terminal domain FK537_15010 PF01144 Coenzyme A transferase FK537_15015 PF01144 Coenzyme A transferase FK537_15020 PF03594 Benzoate membrane transport protein FK537_15025 PF00106 short chain dehydrogenase FK537_15030 PF00175 Oxidoreductase NAD-binding domain FK537_15030 PF00111 2Fe-2S iron-sulfur cluster binding domain FK537_15030 PF00970 Oxidoreductase FAD-binding domain FK537_15035 PF00866 Ring hydroxylating beta subunit FK537_15040 PF00355 Rieske [2Fe-2S] domain FK537_15040 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FK537_15045 PF04444 Catechol dioxygenase N terminus FK537_15045 PF00775 Dioxygenase FK537_15050 PF02426 Muconolactone delta-isomerase FK537_15055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FK537_15055 PF13378 Enolase C-terminal domain-like FK537_15060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK537_15060 PF03466 LysR substrate binding domain FK537_15065 PF07690 Major Facilitator Superfamily FK537_15080 PF00487 Fatty acid desaturase FK537_15105 PF07690 Major Facilitator Superfamily FK537_15115 PF12323 Helix-turn-helix domain FK537_15115 PF07282 Putative transposase DNA-binding domain FK537_15115 PF01385 Probable transposase FK537_15120 PF02560 Cyanate lyase C-terminal domain FK537_15125 PF01226 Formate/nitrite transporter FK537_15130 PF00069 Protein kinase domain FK537_15145 PF13533 Biotin-lipoyl like FK537_15180 PF02028 BCCT, betaine/carnitine/choline family transporter FK537_15185 PF00440 Bacterial regulatory proteins, tetR family FK537_15185 PF13977 BetI-type transcriptional repressor, C-terminal FK537_15190 PF00171 Aldehyde dehydrogenase family FK537_15195 PF05199 GMC oxidoreductase FK537_15195 PF00732 GMC oxidoreductase FK537_15205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK537_15205 PF08521 Two-component sensor kinase N-terminal FK537_15205 PF00512 His Kinase A (phospho-acceptor) domain FK537_15210 PF00486 Transcriptional regulatory protein, C terminal FK537_15210 PF00072 Response regulator receiver domain FK537_15215 PF11412 Disulphide bond corrector protein DsbC FK537_15215 PF02683 Cytochrome C biogenesis protein transmembrane region FK537_15220 PF08534 Redoxin FK537_15225 PF13098 Thioredoxin-like domain FK537_15245 PF00691 OmpA family FK537_15245 PF00223 Photosystem I psaA/psaB protein FK537_15255 PF01717 Cobalamin-independent synthase, Catalytic domain FK537_15260 PF01613 Flavin reductase like domain FK537_15265 PF01925 Sulfite exporter TauE/SafE FK537_15285 PF00440 Bacterial regulatory proteins, tetR family FK537_15285 PF08359 YsiA-like protein, C-terminal region FK537_15305 PF04717 Type VI secretion system, phage-baseplate injector FK537_15315 PF13737 Transposase DDE domain FK537_15325 PF02796 Helix-turn-helix domain of resolvase FK537_15325 PF00665 Integrase core domain FK537_15330 PF01695 IstB-like ATP binding protein