locus-tag class description F9230_00005 PF00308 Bacterial dnaA protein F9230_00005 PF08299 Bacterial dnaA protein helix-turn-helix F9230_00005 PF11638 DnaA N-terminal domain F9230_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain F9230_00010 PF02767 DNA polymerase III beta subunit, central domain F9230_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain F9230_00015 PF02463 RecF/RecN/SMC N terminal domain F9230_00020 PF00204 DNA gyrase B F9230_00020 PF00986 DNA gyrase B subunit, carboxyl terminus F9230_00020 PF18053 DNA gyrase B subunit insert domain F9230_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_00020 PF01751 Toprim domain F9230_00030 PF12848 ABC transporter F9230_00030 PF00005 ABC transporter F9230_00050 PF01521 Iron-sulphur cluster biosynthesis F9230_00065 PF00905 Penicillin binding protein transpeptidase domain F9230_00070 PF00012 Hsp70 protein F9230_00075 PF01025 GrpE F9230_00090 PF07859 alpha/beta hydrolase fold F9230_00100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F9230_00130 PF07690 Major Facilitator Superfamily F9230_00140 PF00209 Sodium:neurotransmitter symporter family F9230_00185 PF01029 NusB family F9230_00185 PF01189 16S rRNA methyltransferase RsmB/F F9230_00190 PF00551 Formyl transferase F9230_00190 PF02911 Formyl transferase, C-terminal domain F9230_00195 PF00920 Dehydratase family F9230_00200 PF00920 Dehydratase family F9230_00210 PF07715 TonB-dependent Receptor Plug Domain F9230_00210 PF00593 TonB dependent receptor F9230_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_00220 PF03466 LysR substrate binding domain F9230_00225 PF00860 Permease family F9230_00230 PF00311 Phosphoenolpyruvate carboxylase F9230_00235 PF00440 Bacterial regulatory proteins, tetR family F9230_00240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9230_00245 PF00873 AcrB/AcrD/AcrF family F9230_00255 PF01556 DnaJ C terminal domain F9230_00255 PF00684 DnaJ central domain F9230_00255 PF00226 DnaJ domain F9230_00265 PF01113 Dihydrodipicolinate reductase, N-terminus F9230_00265 PF05173 Dihydrodipicolinate reductase, C-terminus F9230_00280 PF00155 Aminotransferase class I and II F9230_00285 PF08240 Alcohol dehydrogenase GroES-like domain F9230_00285 PF00107 Zinc-binding dehydrogenase F9230_00290 PF03352 Methyladenine glycosylase F9230_00305 PF14815 NUDIX domain F9230_00305 PF00633 Helix-hairpin-helix motif F9230_00305 PF00730 HhH-GPD superfamily base excision DNA repair protein F9230_00320 PF07043 Protein of unknown function (DUF1328) F9230_00325 PF03692 Putative zinc- or iron-chelating domain F9230_00330 PF16193 AAA C-terminal domain F9230_00330 PF00004 ATPase family associated with various cellular activities (AAA) F9230_00330 PF12002 MgsA AAA+ ATPase C terminal F9230_00335 PF01810 LysE type translocator F9230_00340 PF01037 Lrp/AsnC ligand binding domain F9230_00345 PF00005 ABC transporter F9230_00350 PF00528 Binding-protein-dependent transport system inner membrane component F9230_00355 PF00528 Binding-protein-dependent transport system inner membrane component F9230_00360 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9230_00370 PF01259 SAICAR synthetase F9230_00380 PF00701 Dihydrodipicolinate synthetase family F9230_00385 PF00857 Isochorismatase family F9230_00390 PF01758 Sodium Bile acid symporter family F9230_00395 PF13090 Polyphosphate kinase C-terminal domain 2 F9230_00395 PF13089 Polyphosphate kinase N-terminal domain F9230_00395 PF02503 Polyphosphate kinase middle domain F9230_00395 PF17941 Polyphosphate kinase C-terminal domain 1 F9230_00420 PF02580 D-Tyr-tRNA(Tyr) deacylase F9230_00425 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain F9230_00425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family F9230_00430 PF00581 Rhodanese-like domain F9230_00435 PF02666 Phosphatidylserine decarboxylase F9230_00440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_00440 PF00512 His Kinase A (phospho-acceptor) domain F9230_00440 PF00989 PAS fold F9230_00440 PF11808 Phosphate regulon sensor protein PhoR F9230_00445 PF00486 Transcriptional regulatory protein, C terminal F9230_00445 PF00072 Response regulator receiver domain F9230_00455 PF00106 short chain dehydrogenase F9230_00460 PF01554 MatE F9230_00465 PF00155 Aminotransferase class I and II F9230_00470 PF04286 Protein of unknown function (DUF445) F9230_00485 PF04262 Glutamate-cysteine ligase F9230_00490 PF02600 Disulfide bond formation protein DsbB F9230_00500 PF05728 Uncharacterised protein family (UPF0227) F9230_00505 PF00204 DNA gyrase B F9230_00505 PF00986 DNA gyrase B subunit, carboxyl terminus F9230_00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_00505 PF01751 Toprim domain F9230_00515 PF02653 Branched-chain amino acid transport system / permease component F9230_00525 PF12399 Branched-chain amino acid ATP-binding cassette transporter F9230_00525 PF00005 ABC transporter F9230_00530 PF00005 ABC transporter F9230_00575 PF11412 Disulphide bond corrector protein DsbC F9230_00575 PF02683 Cytochrome C biogenesis protein transmembrane region F9230_00585 PF17151 Periplasmic sensor domain F9230_00585 PF00990 Diguanylate cyclase, GGDEF domain F9230_00590 PF02525 Flavodoxin-like fold F9230_00595 PF07859 alpha/beta hydrolase fold F9230_00605 PF03960 ArsC family F9230_00610 PF03372 Endonuclease/Exonuclease/phosphatase family F9230_00615 PF00156 Phosphoribosyl transferase domain F9230_00620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F9230_00620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F9230_00625 PF07715 TonB-dependent Receptor Plug Domain F9230_00625 PF00593 TonB dependent receptor F9230_00635 PF01047 MarR family F9230_00640 PF00255 Glutathione peroxidase F9230_00645 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain F9230_00645 PF02951 Prokaryotic glutathione synthetase, N-terminal domain F9230_00650 PF04101 Glycosyltransferase family 28 C-terminal domain F9230_00650 PF03033 Glycosyltransferase family 28 N-terminal domain F9230_00655 PF02875 Mur ligase family, glutamate ligase domain F9230_00655 PF01225 Mur ligase family, catalytic domain F9230_00655 PF08245 Mur ligase middle domain F9230_00660 PF07478 D-ala D-ala ligase C-terminus F9230_00660 PF01820 D-ala D-ala ligase N-terminus F9230_00665 PF08478 POTRA domain, FtsQ-type F9230_00665 PF03799 Cell division protein FtsQ F9230_00670 PF02491 SHS2 domain inserted in FTSA F9230_00675 PF00091 Tubulin/FtsZ family, GTPase domain F9230_00675 PF12327 FtsZ family, C-terminal domain F9230_00680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F9230_00695 PF17831 Pyruvate dehydrogenase E1 component middle domain F9230_00695 PF00456 Transketolase, thiamine diphosphate binding domain F9230_00700 PF02817 e3 binding domain F9230_00700 PF00364 Biotin-requiring enzyme F9230_00700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F9230_00705 PF01169 Uncharacterized protein family UPF0016 F9230_00710 PF01613 Flavin reductase like domain F9230_00710 PF00258 Flavodoxin F9230_00715 PF03692 Putative zinc- or iron-chelating domain F9230_00720 PF00478 IMP dehydrogenase / GMP reductase domain F9230_00720 PF00571 CBS domain F9230_00725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F9230_00725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F9230_00725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F9230_00725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F9230_00730 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region F9230_00730 PF01243 Pyridoxamine 5'-phosphate oxidase F9230_00735 PF01368 DHH family F9230_00735 PF02272 DHHA1 domain F9230_00735 PF17768 RecJ OB domain F9230_00760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F9230_00765 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) F9230_00770 PF04452 RNA methyltransferase F9230_00775 PF00924 Mechanosensitive ion channel F9230_00780 PF16177 Acetyl-coenzyme A synthetase N-terminus F9230_00780 PF00501 AMP-binding enzyme F9230_00780 PF13193 AMP-binding enzyme C-terminal domain F9230_00785 PF00083 Sugar (and other) transporter F9230_00790 PF01266 FAD dependent oxidoreductase F9230_00800 PF00677 Lumazine binding domain F9230_00815 PF00296 Luciferase-like monooxygenase F9230_00820 PF03358 NADPH-dependent FMN reductase F9230_00825 PF00196 Bacterial regulatory proteins, luxR family F9230_00825 PF00072 Response regulator receiver domain F9230_00835 PF00072 Response regulator receiver domain F9230_00835 PF09456 RcsC Alpha-Beta-Loop (ABL) F9230_00835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_00835 PF00512 His Kinase A (phospho-acceptor) domain F9230_00840 PF04341 Protein of unknown function, DUF485 F9230_00845 PF00474 Sodium:solute symporter family F9230_00855 PF02028 BCCT, betaine/carnitine/choline family transporter F9230_00865 PF17158 Membrane-associated sensor, integral membrane domain F9230_00865 PF00990 Diguanylate cyclase, GGDEF domain F9230_00875 PF17755 UvrA DNA-binding domain F9230_00875 PF17760 UvrA interaction domain F9230_00885 PF08543 Phosphomethylpyrimidine kinase F9230_00885 PF03070 TENA/THI-4/PQQC family F9230_00885 PF02581 Thiamine monophosphate synthase F9230_00895 PF07690 Major Facilitator Superfamily F9230_00900 PF00436 Single-strand binding protein family F9230_00905 PF00206 Lyase F9230_00905 PF10415 Fumarase C C-terminus F9230_00910 PF03466 LysR substrate binding domain F9230_00910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_00915 PF00375 Sodium:dicarboxylate symporter family F9230_00930 PF08267 Cobalamin-independent synthase, N-terminal domain F9230_00930 PF01717 Cobalamin-independent synthase, Catalytic domain F9230_00935 PF01613 Flavin reductase like domain F9230_00940 PF10417 C-terminal domain of 1-Cys peroxiredoxin F9230_00940 PF00578 AhpC/TSA family F9230_00945 PF03466 LysR substrate binding domain F9230_00945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_00950 PF00857 Isochorismatase family F9230_00955 PF02678 Pirin F9230_00955 PF05726 Pirin C-terminal cupin domain F9230_00960 PF01593 Flavin containing amine oxidoreductase F9230_00965 PF08241 Methyltransferase domain F9230_00980 PF13737 Transposase DDE domain F9230_01020 PF13356 Arm DNA-binding domain F9230_01020 PF00589 Phage integrase family F9230_01030 PF02705 K+ potassium transporter F9230_01050 PF00230 Major intrinsic protein F9230_01070 PF00977 Histidine biosynthesis protein F9230_01075 PF01636 Phosphotransferase enzyme family F9230_01080 PF00313 'Cold-shock' DNA-binding domain F9230_01095 PF00324 Amino acid permease F9230_01100 PF01266 FAD dependent oxidoreductase F9230_01110 PF01381 Helix-turn-helix F9230_01115 PF00977 Histidine biosynthesis protein F9230_01135 PF00117 Glutamine amidotransferase class-I F9230_01140 PF00475 Imidazoleglycerol-phosphate dehydratase F9230_01165 PF00583 Acetyltransferase (GNAT) family F9230_01170 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain F9230_01170 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain F9230_01175 PF00512 His Kinase A (phospho-acceptor) domain F9230_01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_01175 PF00672 HAMP domain F9230_01180 PF00486 Transcriptional regulatory protein, C terminal F9230_01180 PF00072 Response regulator receiver domain F9230_01185 PF09371 Tex-like protein N-terminal domain F9230_01185 PF16921 Tex protein YqgF-like domain F9230_01185 PF17674 HHH domain F9230_01185 PF00575 S1 RNA binding domain F9230_01200 PF00106 short chain dehydrogenase F9230_01205 PF01053 Cys/Met metabolism PLP-dependent enzyme F9230_01210 PF00005 ABC transporter F9230_01210 PF12848 ABC transporter F9230_01230 PF00749 tRNA synthetases class I (E and Q), catalytic domain F9230_01250 PF01795 MraW methylase family F9230_01260 PF00905 Penicillin binding protein transpeptidase domain F9230_01260 PF03717 Penicillin-binding Protein dimerisation domain F9230_01265 PF01225 Mur ligase family, catalytic domain F9230_01265 PF02875 Mur ligase family, glutamate ligase domain F9230_01265 PF08245 Mur ligase middle domain F9230_01270 PF02875 Mur ligase family, glutamate ligase domain F9230_01270 PF08245 Mur ligase middle domain F9230_01270 PF01225 Mur ligase family, catalytic domain F9230_01275 PF00953 Glycosyl transferase family 4 F9230_01280 PF13847 Methyltransferase domain F9230_01285 PF00912 Transglycosylase F9230_01285 PF00905 Penicillin binding protein transpeptidase domain F9230_01285 PF17092 Penicillin-binding protein OB-like domain F9230_01290 PF11104 Type IV pilus assembly protein PilM; F9230_01295 PF05137 Fimbrial assembly protein (PilN) F9230_01300 PF04350 Pilus assembly protein, PilO F9230_01310 PF11741 AMIN domain F9230_01310 PF00263 Bacterial type II and III secretion system protein F9230_01310 PF03958 Bacterial type II/III secretion system short domain F9230_01310 PF07660 Secretin and TonB N terminus short domain F9230_01315 PF01202 Shikimate kinase F9230_01320 PF01761 3-dehydroquinate synthase F9230_01330 PF01493 GXGXG motif F9230_01330 PF01645 Conserved region in glutamate synthase F9230_01330 PF04898 Glutamate synthase central domain F9230_01330 PF00310 Glutamine amidotransferases class-II F9230_01335 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_01335 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F9230_01345 PF04011 LemA family F9230_01350 PF04536 TPM domain F9230_01360 PF07963 Prokaryotic N-terminal methylation motif F9230_01360 PF00114 Pilin (bacterial filament) F9230_01365 PF07963 Prokaryotic N-terminal methylation motif F9230_01365 PF00114 Pilin (bacterial filament) F9230_01380 PF00210 Ferritin-like domain F9230_01385 PF04324 BFD-like [2Fe-2S] binding domain F9230_01390 PF01042 Endoribonuclease L-PSP F9230_01395 PF02824 TGS domain F9230_01395 PF04607 Region found in RelA / SpoT proteins F9230_01395 PF13291 ACT domain F9230_01400 PF01192 RNA polymerase Rpb6 F9230_01405 PF00625 Guanylate kinase F9230_01410 PF02401 LytB protein F9230_01415 PF07963 Prokaryotic N-terminal methylation motif F9230_01415 PF00114 Pilin (bacterial filament) F9230_01445 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor F9230_01445 PF07963 Prokaryotic N-terminal methylation motif F9230_01450 PF00886 Ribosomal protein S16 F9230_01455 PF05239 PRC-barrel domain F9230_01455 PF01782 RimM N-terminal domain F9230_01460 PF01746 tRNA (Guanine-1)-methyltransferase F9230_01465 PF01245 Ribosomal protein L19 F9230_01470 PF00561 alpha/beta hydrolase fold F9230_01475 PF00561 alpha/beta hydrolase fold F9230_01480 PF03280 Proteobacterial lipase chaperone protein F9230_01485 PF01509 TruB family pseudouridylate synthase (N terminal domain) F9230_01485 PF16198 tRNA pseudouridylate synthase B C-terminal domain F9230_01485 PF09157 Pseudouridine synthase II TruB, C-terminal F9230_01490 PF01925 Sulfite exporter TauE/SafE F9230_01500 PF00892 EamA-like transporter family F9230_01505 PF00892 EamA-like transporter family F9230_01510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9230_01510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F9230_01515 PF01565 FAD binding domain F9230_01515 PF02913 FAD linked oxidases, C-terminal domain F9230_01525 PF00072 Response regulator receiver domain F9230_01525 PF00196 Bacterial regulatory proteins, luxR family F9230_01530 PF07690 Major Facilitator Superfamily F9230_01530 PF00083 Sugar (and other) transporter F9230_01535 PF07690 Major Facilitator Superfamily F9230_01540 PF12823 Domain of unknown function (DUF3817) F9230_01545 PF12805 FUSC-like inner membrane protein yccS F9230_01550 PF00080 Copper/zinc superoxide dismutase (SODC) F9230_01555 PF01594 AI-2E family transporter F9230_01560 PF13614 AAA domain F9230_01570 PF01209 ubiE/COQ5 methyltransferase family F9230_01585 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F9230_01590 PF01197 Ribosomal protein L31 F9230_01595 PF03109 ABC1 family F9230_01605 PF01554 MatE F9230_01615 PF04055 Radical SAM superfamily F9230_01615 PF06969 HemN C-terminal domain F9230_01625 PF01965 DJ-1/PfpI family F9230_01635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_01635 PF12806 Acetyl-CoA dehydrogenase C-terminal like F9230_01635 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_01635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_01645 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F9230_01645 PF01488 Shikimate / quinate 5-dehydrogenase F9230_01645 PF08501 Shikimate dehydrogenase substrate binding domain F9230_01655 PF01218 Coproporphyrinogen III oxidase F9230_01660 PF04055 Radical SAM superfamily F9230_01660 PF06969 HemN C-terminal domain F9230_01665 PF00925 GTP cyclohydrolase II F9230_01670 PF02779 Transketolase, pyrimidine binding domain F9230_01670 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F9230_01670 PF02780 Transketolase, C-terminal domain F9230_01675 PF00459 Inositol monophosphatase family F9230_01680 PF00270 DEAD/DEAH box helicase F9230_01680 PF00271 Helicase conserved C-terminal domain F9230_01685 PF00005 ABC transporter F9230_01690 PF02405 Permease MlaE F9230_01695 PF02470 MlaD protein F9230_01700 PF05494 MlaC protein F9230_01710 PF01544 CorA-like Mg2+ transporter protein F9230_01715 PF03641 Possible lysine decarboxylase F9230_01720 PF00293 NUDIX domain F9230_01725 PF00156 Phosphoribosyl transferase domain F9230_01730 PF17191 RecG wedge domain F9230_01730 PF00270 DEAD/DEAH box helicase F9230_01730 PF00271 Helicase conserved C-terminal domain F9230_01755 PF01553 Acyltransferase F9230_01765 PF00375 Sodium:dicarboxylate symporter family F9230_01775 PF01926 50S ribosome-binding GTPase F9230_01780 PF02082 Transcriptional regulator F9230_01785 PF00970 Oxidoreductase FAD-binding domain F9230_01785 PF00042 Globin F9230_01785 PF00175 Oxidoreductase NAD-binding domain F9230_01790 PF05872 Bacterial protein of unknown function (DUF853) F9230_01795 PF01053 Cys/Met metabolism PLP-dependent enzyme F9230_01800 PF00117 Glutamine amidotransferase class-I F9230_01805 PF00338 Ribosomal protein S10p/S20e F9230_01810 PF00297 Ribosomal protein L3 F9230_01815 PF00573 Ribosomal protein L4/L1 family F9230_01820 PF00276 Ribosomal protein L23 F9230_01825 PF03947 Ribosomal Proteins L2, C-terminal domain F9230_01825 PF00181 Ribosomal Proteins L2, RNA binding domain F9230_01830 PF00203 Ribosomal protein S19 F9230_01835 PF00237 Ribosomal protein L22p/L17e F9230_01840 PF07650 KH domain F9230_01840 PF00189 Ribosomal protein S3, C-terminal domain F9230_01845 PF00252 Ribosomal protein L16p/L10e F9230_01850 PF00831 Ribosomal L29 protein F9230_01855 PF00366 Ribosomal protein S17 F9230_01860 PF00238 Ribosomal protein L14p/L23e F9230_01865 PF00467 KOW motif F9230_01865 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F9230_01870 PF00281 Ribosomal protein L5 F9230_01870 PF00673 ribosomal L5P family C-terminus F9230_01875 PF00253 Ribosomal protein S14p/S29e F9230_01880 PF00410 Ribosomal protein S8 F9230_01885 PF00347 Ribosomal protein L6 F9230_01890 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F9230_01895 PF00333 Ribosomal protein S5, N-terminal domain F9230_01895 PF03719 Ribosomal protein S5, C-terminal domain F9230_01900 PF00327 Ribosomal protein L30p/L7e F9230_01905 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F9230_01910 PF00344 SecY translocase F9230_01915 PF00444 Ribosomal protein L36 F9230_01920 PF00416 Ribosomal protein S13/S18 F9230_01925 PF00411 Ribosomal protein S11 F9230_01930 PF01479 S4 domain F9230_01930 PF00163 Ribosomal protein S4/S9 N-terminal domain F9230_01935 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F9230_01935 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F9230_01935 PF01000 RNA polymerase Rpb3/RpoA insert domain F9230_01940 PF01196 Ribosomal protein L17 F9230_01945 PF00743 Flavin-binding monooxygenase-like F9230_01955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_01955 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_01955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_01960 PF03937 Flavinator of succinate dehydrogenase F9230_01995 PF09526 Probable metal-binding protein (DUF2387) F9230_02000 PF01432 Peptidase family M3 F9230_02005 PF04294 VanW like protein F9230_02010 PF17876 Cold shock domain F9230_02010 PF08461 Ribonuclease R winged-helix domain F9230_02010 PF08206 Ribonuclease B OB domain F9230_02010 PF00773 RNB domain F9230_02010 PF00575 S1 RNA binding domain F9230_02040 PF01557 Fumarylacetoacetate (FAA) hydrolase family F9230_02055 PF03631 Virulence factor BrkB F9230_02060 PF03358 NADPH-dependent FMN reductase F9230_02070 PF00990 Diguanylate cyclase, GGDEF domain F9230_02095 PF00593 TonB dependent receptor F9230_02095 PF07715 TonB-dependent Receptor Plug Domain F9230_02105 PF02130 Uncharacterized protein family UPF0054 F9230_02110 PF02562 PhoH-like protein F9230_02115 PF04055 Radical SAM superfamily F9230_02115 PF01938 TRAM domain F9230_02115 PF00919 Uncharacterized protein family UPF0004 F9230_02120 PF01464 Transglycosylase SLT domain F9230_02120 PF01551 Peptidase family M23 F9230_02120 PF10145 Phage-related minor tail protein F9230_02130 PF00056 lactate/malate dehydrogenase, NAD binding domain F9230_02130 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F9230_02155 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ F9230_02160 PF01066 CDP-alcohol phosphatidyltransferase F9230_02195 PF00403 Heavy-metal-associated domain F9230_02195 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_02195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F9230_02205 PF04273 Putative phosphatase (DUF442) F9230_02205 PF00753 Metallo-beta-lactamase superfamily F9230_02215 PF00085 Thioredoxin F9230_02220 PF03061 Thioesterase superfamily F9230_02235 PF04461 Protein of unknown function (DUF520) F9230_02245 PF01266 FAD dependent oxidoreductase F9230_02245 PF05430 S-adenosyl-L-methionine-dependent methyltransferase F9230_02255 PF03795 YCII-related domain F9230_02260 PF04279 Intracellular septation protein A F9230_02265 PF02811 PHP domain F9230_02270 PF01062 Bestrophin, RFP-TM, chloride channel F9230_02275 PF04002 RadC-like JAB domain F9230_02280 PF04127 DNA / pantothenate metabolism flavoprotein F9230_02280 PF02441 Flavoprotein F9230_02290 PF02556 Preprotein translocase subunit SecB F9230_02295 PF00462 Glutaredoxin F9230_02305 PF03193 RsgA GTPase F9230_02310 PF00929 Exonuclease F9230_02335 PF02321 Outer membrane efflux protein F9230_02340 PF12704 MacB-like periplasmic core domain F9230_02340 PF02687 FtsX-like permease family F9230_02340 PF00005 ABC transporter F9230_02345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9230_02360 PF08264 Anticodon-binding domain of tRNA F9230_02360 PF00133 tRNA synthetases class I (I, L, M and V) F9230_02360 PF13603 Leucyl-tRNA synthetase, Domain 2 F9230_02360 PF09334 tRNA synthetases class I (M) F9230_02370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F9230_02370 PF00205 Thiamine pyrophosphate enzyme, central domain F9230_02370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F9230_02375 PF10369 Small subunit of acetolactate synthase F9230_02380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F9230_02380 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F9230_02405 PF13439 Glycosyltransferase Family 4 F9230_02405 PF00534 Glycosyl transferases group 1 F9230_02410 PF01569 PAP2 superfamily F9230_02415 PF04384 Iron-sulphur cluster assembly F9230_02420 PF00334 Nucleoside diphosphate kinase F9230_02425 PF04055 Radical SAM superfamily F9230_02435 PF13464 Domain of unknown function (DUF4115) F9230_02440 PF04551 GcpE protein F9230_02445 PF13393 Histidyl-tRNA synthetase F9230_02445 PF03129 Anticodon binding domain F9230_02455 PF13360 PQQ-like domain F9230_02455 PF01011 PQQ enzyme repeat F9230_02460 PF01926 50S ribosome-binding GTPase F9230_02460 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F9230_02465 PF01648 4'-phosphopantetheinyl transferase superfamily F9230_02470 PF02355 Protein export membrane protein F9230_02470 PF07549 SecD/SecF GG Motif F9230_02475 PF02355 Protein export membrane protein F9230_02475 PF13721 SecD export protein N-terminal TM region F9230_02475 PF07549 SecD/SecF GG Motif F9230_02480 PF02699 Preprotein translocase subunit F9230_02485 PF01702 Queuine tRNA-ribosyltransferase F9230_02490 PF04011 LemA family F9230_02500 PF02547 Queuosine biosynthesis protein F9230_02510 PF00672 HAMP domain F9230_02510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_02510 PF13426 PAS domain F9230_02510 PF00512 His Kinase A (phospho-acceptor) domain F9230_02515 PF03710 Glutamate-ammonia ligase adenylyltransferase F9230_02515 PF08335 GlnD PII-uridylyltransferase F9230_02520 PF01063 Amino-transferase class IV F9230_02530 PF01370 NAD dependent epimerase/dehydratase family F9230_02535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F9230_02535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F9230_02535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F9230_02545 PF11380 Stealth protein CR2, conserved region 2 F9230_02545 PF17102 Stealth protein CR3, conserved region 3 F9230_02545 PF17103 Stealth protein CR4, conserved region 4 F9230_02545 PF17101 Stealth protein CR1, conserved region 1 F9230_02555 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) F9230_02560 PF16363 GDP-mannose 4,6 dehydratase F9230_02565 PF00483 Nucleotidyl transferase F9230_02570 PF05523 WxcM-like, C-terminal F9230_02575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F9230_02580 PF00535 Glycosyl transferase family 2 F9230_02585 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_02590 PF09612 Bacterial protein of unknown function (HtrL_YibB) F9230_02610 PF02938 GAD domain F9230_02610 PF00152 tRNA synthetases class II (D, K and N) F9230_02610 PF01336 OB-fold nucleic acid binding domain F9230_02620 PF07715 TonB-dependent Receptor Plug Domain F9230_02620 PF00593 TonB dependent receptor F9230_02640 PF06146 Phosphate-starvation-inducible E F9230_02645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_02645 PF12806 Acetyl-CoA dehydrogenase C-terminal like F9230_02645 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_02645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_02650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_02650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_02650 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_02650 PF12806 Acetyl-CoA dehydrogenase C-terminal like F9230_02660 PF00672 HAMP domain F9230_02660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_02660 PF00512 His Kinase A (phospho-acceptor) domain F9230_02665 PF00072 Response regulator receiver domain F9230_02665 PF00486 Transcriptional regulatory protein, C terminal F9230_02670 PF00324 Amino acid permease F9230_02680 PF02696 Uncharacterized ACR, YdiU/UPF0061 family F9230_02700 PF01923 Cobalamin adenosyltransferase F9230_02705 PF07715 TonB-dependent Receptor Plug Domain F9230_02705 PF00593 TonB dependent receptor F9230_02710 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F9230_02715 PF00291 Pyridoxal-phosphate dependent enzyme F9230_02730 PF11893 Domain of unknown function (DUF3413) F9230_02730 PF00884 Sulfatase F9230_02740 PF12833 Helix-turn-helix domain F9230_02740 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term F9230_02750 PF00290 Tryptophan synthase alpha chain F9230_02755 PF01039 Carboxyl transferase domain F9230_02760 PF02875 Mur ligase family, glutamate ligase domain F9230_02760 PF08245 Mur ligase middle domain F9230_02775 PF00753 Metallo-beta-lactamase superfamily F9230_02780 PF00578 AhpC/TSA family F9230_02780 PF10417 C-terminal domain of 1-Cys peroxiredoxin F9230_02790 PF07516 SecA Wing and Scaffold domain F9230_02790 PF01043 SecA preprotein cross-linking domain F9230_02790 PF07517 SecA DEAD-like domain F9230_02790 PF02810 SEC-C motif F9230_02800 PF01960 ArgJ family F9230_02805 PF02445 Quinolinate synthetase A protein F9230_02835 PF00990 Diguanylate cyclase, GGDEF domain F9230_02835 PF17152 Periplasmic sensor domain F9230_02840 PF13689 YfiR/HmsC-like F9230_02870 PF07690 Major Facilitator Superfamily F9230_02885 PF01965 DJ-1/PfpI family F9230_02890 PF04963 Sigma-54 factor, core binding domain F9230_02890 PF04552 Sigma-54, DNA binding domain F9230_02890 PF00309 Sigma-54 factor, Activator interacting domain (AID) F9230_02895 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F9230_02900 PF01722 BolA-like protein F9230_02905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F9230_02910 PF01634 ATP phosphoribosyltransferase F9230_02920 PF00815 Histidinol dehydrogenase F9230_02925 PF00155 Aminotransferase class I and II F9230_02930 PF00425 chorismate binding enzyme F9230_02930 PF04715 Anthranilate synthase component I, N terminal region F9230_02970 PF00293 NUDIX domain F9230_02975 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_02980 PF00814 Glycoprotease family F9230_02985 PF02673 Bacitracin resistance protein BacA F9230_02990 PF04445 Putative SAM-dependent methyltransferase F9230_03000 PF00756 Putative esterase F9230_03020 PF00834 Ribulose-phosphate 3 epimerase family F9230_03030 PF00394 Multicopper oxidase F9230_03030 PF07732 Multicopper oxidase F9230_03030 PF07731 Multicopper oxidase F9230_03045 PF00893 Small Multidrug Resistance protein F9230_03050 PF00893 Small Multidrug Resistance protein F9230_03055 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F9230_03055 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F9230_03065 PF02581 Thiamine monophosphate synthase F9230_03065 PF03070 TENA/THI-4/PQQC family F9230_03065 PF08543 Phosphomethylpyrimidine kinase F9230_03070 PF13419 Haloacid dehalogenase-like hydrolase F9230_03080 PF01037 Lrp/AsnC ligand binding domain F9230_03085 PF01266 FAD dependent oxidoreductase F9230_03090 PF01168 Alanine racemase, N-terminal domain F9230_03090 PF00842 Alanine racemase, C-terminal domain F9230_03095 PF01042 Endoribonuclease L-PSP F9230_03100 PF00324 Amino acid permease F9230_03105 PF01757 Acyltransferase family F9230_03110 PF03653 Uncharacterised protein family (UPF0093) F9230_03115 PF00109 Beta-ketoacyl synthase, N-terminal domain F9230_03115 PF02801 Beta-ketoacyl synthase, C-terminal domain F9230_03125 PF00164 Ribosomal protein S12/S23 F9230_03130 PF00177 Ribosomal protein S7p/S5e F9230_03135 PF03764 Elongation factor G, domain IV F9230_03135 PF03144 Elongation factor Tu domain 2 F9230_03135 PF00009 Elongation factor Tu GTP binding domain F9230_03135 PF14492 Elongation Factor G, domain II F9230_03135 PF00679 Elongation factor G C-terminus F9230_03140 PF03144 Elongation factor Tu domain 2 F9230_03140 PF03143 Elongation factor Tu C-terminal domain F9230_03140 PF00009 Elongation factor Tu GTP binding domain F9230_03145 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term F9230_03145 PF12833 Helix-turn-helix domain F9230_03170 PF00583 Acetyltransferase (GNAT) family F9230_03175 PF04377 Arginine-tRNA-protein transferase, C terminus F9230_03175 PF04376 Arginine-tRNA-protein transferase, N terminus F9230_03180 PF03588 Leucyl/phenylalanyl-tRNA protein transferase F9230_03185 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_03190 PF01580 FtsK/SpoIIIE family F9230_03190 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F9230_03190 PF17854 FtsK alpha domain F9230_03190 PF09397 Ftsk gamma domain F9230_03205 PF03776 Septum formation topological specificity factor MinE F9230_03210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F9230_03215 PF03775 Septum formation inhibitor MinC, C-terminal domain F9230_03225 PF01553 Acyltransferase F9230_03230 PF13488 Glycine zipper F9230_03230 PF00691 OmpA family F9230_03235 PF00580 UvrD/REP helicase N-terminal domain F9230_03235 PF13361 UvrD-like helicase C-terminal domain F9230_03240 PF00692 dUTPase F9230_03245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F9230_03245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F9230_03245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F9230_03245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F9230_03250 PF00696 Amino acid kinase family F9230_03255 PF13230 Glutamine amidotransferases class-II F9230_03260 PF01814 Hemerythrin HHE cation binding domain F9230_03270 PF03658 RnfH family Ubiquitin F9230_03275 PF04355 SmpA / OmlA family F9230_03280 PF01475 Ferric uptake regulator family F9230_03285 PF00437 Type II/IV secretion system protein F9230_03290 PF00437 Type II/IV secretion system protein F9230_03295 PF01168 Alanine racemase, N-terminal domain F9230_03310 PF12320 Type 5 capsule protein repressor C-terminal domain F9230_03310 PF00149 Calcineurin-like phosphoesterase F9230_03315 PF00990 Diguanylate cyclase, GGDEF domain F9230_03315 PF00360 Phytochrome region F9230_03315 PF00563 EAL domain F9230_03315 PF01590 GAF domain F9230_03325 PF08338 Domain of unknown function (DUF1731) F9230_03325 PF01370 NAD dependent epimerase/dehydratase family F9230_03330 PF01266 FAD dependent oxidoreductase F9230_03335 PF00490 Delta-aminolevulinic acid dehydratase F9230_03340 PF03061 Thioesterase superfamily F9230_03345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9230_03345 PF00529 HlyD membrane-fusion protein of T1SS F9230_03350 PF07690 Major Facilitator Superfamily F9230_03355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F9230_03355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F9230_03450 PF00145 C-5 cytosine-specific DNA methylase F9230_03585 PF13356 Arm DNA-binding domain F9230_03585 PF00589 Phage integrase family F9230_03625 PF02350 UDP-N-acetylglucosamine 2-epimerase F9230_03655 PF02673 Bacitracin resistance protein BacA F9230_03660 PF03814 Potassium-transporting ATPase A subunit F9230_03670 PF02669 K+-transporting ATPase, c chain F9230_03675 PF13493 Domain of unknown function (DUF4118) F9230_03675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_03675 PF00512 His Kinase A (phospho-acceptor) domain F9230_03675 PF02702 Osmosensitive K+ channel His kinase sensor domain F9230_03680 PF00072 Response regulator receiver domain F9230_03680 PF00486 Transcriptional regulatory protein, C terminal F9230_03685 PF00892 EamA-like transporter family F9230_03690 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus F9230_03690 PF08666 SAF domain F9230_03695 PF07690 Major Facilitator Superfamily F9230_03700 PF00701 Dihydrodipicolinate synthetase family F9230_03705 PF00171 Aldehyde dehydrogenase family F9230_03710 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system F9230_03715 PF07729 FCD domain F9230_03715 PF00392 Bacterial regulatory proteins, gntR family F9230_03720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F9230_03720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9230_03725 PF00392 Bacterial regulatory proteins, gntR family F9230_03725 PF07729 FCD domain F9230_03740 PF16957 Malonate decarboxylase, alpha subunit, transporter F9230_03745 PF06857 Malonate decarboxylase delta subunit (MdcD) F9230_03750 PF01039 Carboxyl transferase domain F9230_03765 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase F9230_03780 PF07690 Major Facilitator Superfamily F9230_03785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_03785 PF03466 LysR substrate binding domain F9230_03790 PF00892 EamA-like transporter family F9230_03795 PF01037 Lrp/AsnC ligand binding domain F9230_03805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F9230_03805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F9230_03810 PF03788 LrgA family F9230_03815 PF04172 LrgB-like family F9230_03825 PF00155 Aminotransferase class I and II F9230_03825 PF00392 Bacterial regulatory proteins, gntR family F9230_03835 PF02322 Cytochrome bd terminal oxidase subunit II F9230_03840 PF01654 Cytochrome bd terminal oxidase subunit I F9230_03855 PF00324 Amino acid permease F9230_03860 PF00155 Aminotransferase class I and II F9230_03860 PF00392 Bacterial regulatory proteins, gntR family F9230_03865 PF00202 Aminotransferase class-III F9230_03870 PF00171 Aldehyde dehydrogenase family F9230_03880 PF01037 Lrp/AsnC ligand binding domain F9230_03885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F9230_03885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F9230_03890 PF00202 Aminotransferase class-III F9230_03895 PF04958 Arginine N-succinyltransferase beta subunit F9230_03900 PF00171 Aldehyde dehydrogenase family F9230_03905 PF04996 Succinylarginine dihydrolase F9230_03910 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family F9230_03915 PF00324 Amino acid permease F9230_03920 PF00842 Alanine racemase, C-terminal domain F9230_03920 PF01168 Alanine racemase, N-terminal domain F9230_03925 PF07715 TonB-dependent Receptor Plug Domain F9230_03925 PF00593 TonB dependent receptor F9230_03940 PF09339 IclR helix-turn-helix domain F9230_03940 PF01614 Bacterial transcriptional regulator F9230_03945 PF01144 Coenzyme A transferase F9230_03950 PF01144 Coenzyme A transferase F9230_03955 PF02803 Thiolase, C-terminal domain F9230_03955 PF00108 Thiolase, N-terminal domain F9230_03960 PF10397 Adenylosuccinate lyase C-terminus F9230_03960 PF00206 Lyase F9230_03965 PF00561 alpha/beta hydrolase fold F9230_03970 PF07690 Major Facilitator Superfamily F9230_03975 PF02627 Carboxymuconolactone decarboxylase family F9230_03980 PF00775 Dioxygenase F9230_03980 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal F9230_03985 PF00775 Dioxygenase F9230_03990 PF01487 Type I 3-dehydroquinase F9230_03995 PF05048 Periplasmic copper-binding protein (NosD) F9230_04000 PF04966 Carbohydrate-selective porin, OprB family F9230_04005 PF13360 PQQ-like domain F9230_04005 PF01011 PQQ enzyme repeat F9230_04010 PF07715 TonB-dependent Receptor Plug Domain F9230_04010 PF00593 TonB dependent receptor F9230_04020 PF01144 Coenzyme A transferase F9230_04025 PF01144 Coenzyme A transferase F9230_04030 PF03466 LysR substrate binding domain F9230_04030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_04050 PF05992 SbmA/BacA-like family F9230_04085 PF02934 GatB/GatE catalytic domain F9230_04085 PF02637 GatB domain F9230_04090 PF01425 Amidase F9230_04095 PF02686 Glu-tRNAGln amidotransferase C subunit F9230_04105 PF04085 rod shape-determining protein MreC F9230_04110 PF04093 rod shape-determining protein MreD F9230_04115 PF02545 Maf-like protein F9230_04120 PF10150 Ribonuclease E/G family F9230_04120 PF00575 S1 RNA binding domain F9230_04125 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain F9230_04125 PF06974 Protein of unknown function (DUF1298) F9230_04130 PF01507 Phosphoadenosine phosphosulfate reductase family F9230_04160 PF00171 Aldehyde dehydrogenase family F9230_04165 PF05199 GMC oxidoreductase F9230_04170 PF03960 ArsC family F9230_04175 PF01022 Bacterial regulatory protein, arsR family F9230_04185 PF01758 Sodium Bile acid symporter family F9230_04190 PF03358 NADPH-dependent FMN reductase F9230_04205 PF14497 Glutathione S-transferase, C-terminal domain F9230_04205 PF02798 Glutathione S-transferase, N-terminal domain F9230_04220 PF00155 Aminotransferase class I and II F9230_04225 PF00324 Amino acid permease F9230_04230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9230_04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_04235 PF03466 LysR substrate binding domain F9230_04240 PF00557 Metallopeptidase family M24 F9230_04245 PF02028 BCCT, betaine/carnitine/choline family transporter F9230_04250 PF00355 Rieske [2Fe-2S] domain F9230_04250 PF00848 Ring hydroxylating alpha subunit (catalytic domain) F9230_04255 PF00171 Aldehyde dehydrogenase family F9230_04260 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_04260 PF18113 Rubredoxin binding C-terminal domain F9230_04265 PF01266 FAD dependent oxidoreductase F9230_04265 PF00355 Rieske [2Fe-2S] domain F9230_04285 PF00892 EamA-like transporter family F9230_04290 PF00892 EamA-like transporter family F9230_04305 PF13356 Arm DNA-binding domain F9230_04305 PF00589 Phage integrase family F9230_04315 PF00324 Amino acid permease F9230_04320 PF04303 PrpF protein F9230_04325 PF00348 Polyprenyl synthetase F9230_04330 PF01145 SPFH domain / Band 7 family F9230_04340 PF01734 Patatin-like phospholipase F9230_04360 PF08019 Phosphoethanolamine transferase EptA/EptB F9230_04360 PF00884 Sulfatase F9230_04365 PF00072 Response regulator receiver domain F9230_04365 PF00486 Transcriptional regulatory protein, C terminal F9230_04370 PF08521 Two-component sensor kinase N-terminal F9230_04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_04370 PF00512 His Kinase A (phospho-acceptor) domain F9230_04385 PF00909 Ammonium Transporter Family F9230_04390 PF00194 Eukaryotic-type carbonic anhydrase F9230_04395 PF00005 ABC transporter F9230_04400 PF00528 Binding-protein-dependent transport system inner membrane component F9230_04405 PF00528 Binding-protein-dependent transport system inner membrane component F9230_04410 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9230_04425 PF05552 Conserved TM helix F9230_04440 PF00291 Pyridoxal-phosphate dependent enzyme F9230_04445 PF13533 Biotin-lipoyl like F9230_04470 PF06100 MCRA family F9230_04480 PF03783 Curli production assembly/transport component CsgG F9230_04490 PF05643 Putative bacterial lipoprotein (DUF799) F9230_04505 PF01588 Putative tRNA binding domain F9230_04505 PF09334 tRNA synthetases class I (M) F9230_04530 PF10609 NUBPL iron-transfer P-loop NTPase F9230_04545 PF16868 NMT1-like family F9230_04555 PF00692 dUTPase F9230_04580 PF04073 Aminoacyl-tRNA editing domain F9230_04580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F9230_04580 PF03129 Anticodon binding domain F9230_04585 PF00873 AcrB/AcrD/AcrF family F9230_04600 PF00072 Response regulator receiver domain F9230_04605 PF00072 Response regulator receiver domain F9230_04610 PF01584 CheW-like domain F9230_04615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9230_04615 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term F9230_04620 PF02895 Signal transducing histidine kinase, homodimeric domain F9230_04620 PF01584 CheW-like domain F9230_04620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_04620 PF01627 Hpt domain F9230_04620 PF00072 Response regulator receiver domain F9230_04630 PF01546 Peptidase family M20/M25/M40 F9230_04630 PF07687 Peptidase dimerisation domain F9230_04645 PF04304 Protein of unknown function (DUF454) F9230_04715 PF00667 FAD binding domain F9230_04715 PF00258 Flavodoxin F9230_04715 PF00175 Oxidoreductase NAD-binding domain F9230_04725 PF12805 FUSC-like inner membrane protein yccS F9230_04730 PF07690 Major Facilitator Superfamily F9230_04745 PF03616 Sodium/glutamate symporter F9230_04750 PF01235 Sodium:alanine symporter family F9230_04760 PF01734 Patatin-like phospholipase F9230_04765 PF03061 Thioesterase superfamily F9230_04775 PF07683 Cobalamin synthesis protein cobW C-terminal domain F9230_04775 PF02492 CobW/HypB/UreG, nucleotide-binding domain F9230_04780 PF07152 YaeQ protein F9230_04785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9230_04790 PF00990 Diguanylate cyclase, GGDEF domain F9230_04815 PF00378 Enoyl-CoA hydratase/isomerase F9230_04820 PF04973 Nicotinamide mononucleotide transporter F9230_04835 PF08946 Osmosensory transporter coiled coil F9230_04835 PF00083 Sugar (and other) transporter F9230_04840 PF01327 Polypeptide deformylase F9230_04845 PF12833 Helix-turn-helix domain F9230_04845 PF02311 AraC-like ligand binding domain F9230_04850 PF07690 Major Facilitator Superfamily F9230_04875 PF02574 Homocysteine S-methyltransferase F9230_04875 PF00809 Pterin binding enzyme F9230_04875 PF02965 Vitamin B12 dependent methionine synthase, activation domain F9230_04875 PF02607 B12 binding domain F9230_04875 PF02310 B12 binding domain F9230_04880 PF01384 Phosphate transporter family F9230_04895 PF01521 Iron-sulphur cluster biosynthesis F9230_04895 PF01106 NifU-like domain F9230_04900 PF07715 TonB-dependent Receptor Plug Domain F9230_04900 PF00593 TonB dependent receptor F9230_04910 PF00561 alpha/beta hydrolase fold F9230_04915 PF00484 Carbonic anhydrase F9230_04920 PF13472 GDSL-like Lipase/Acylhydrolase family F9230_04925 PF00005 ABC transporter F9230_04935 PF01694 Rhomboid family F9230_04940 PF00912 Transglycosylase F9230_04945 PF13089 Polyphosphate kinase N-terminal domain F9230_04945 PF17941 Polyphosphate kinase C-terminal domain 1 F9230_04945 PF13090 Polyphosphate kinase C-terminal domain 2 F9230_04945 PF02503 Polyphosphate kinase middle domain F9230_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_04950 PF03466 LysR substrate binding domain F9230_04955 PF00561 alpha/beta hydrolase fold F9230_04960 PF18113 Rubredoxin binding C-terminal domain F9230_04960 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_04965 PF00301 Rubredoxin F9230_04970 PF00156 Phosphoribosyl transferase domain F9230_04980 PF01336 OB-fold nucleic acid binding domain F9230_04980 PF00152 tRNA synthetases class II (D, K and N) F9230_04985 PF14052 Capsule assembly protein Wzi F9230_04990 PF01507 Phosphoadenosine phosphosulfate reductase family F9230_04995 PF00009 Elongation factor Tu GTP binding domain F9230_05010 PF03551 Transcriptional regulator PadR-like family F9230_05025 PF00550 Phosphopantetheine attachment site F9230_05025 PF00698 Acyl transferase domain F9230_05025 PF08240 Alcohol dehydrogenase GroES-like domain F9230_05025 PF08659 KR domain F9230_05025 PF14765 Polyketide synthase dehydratase F9230_05050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F9230_05050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F9230_05065 PF00083 Sugar (and other) transporter F9230_05070 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F9230_05070 PF01266 FAD dependent oxidoreductase F9230_05080 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain F9230_05080 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain F9230_05085 PF00781 Diacylglycerol kinase catalytic domain F9230_05095 PF00166 Chaperonin 10 Kd subunit F9230_05100 PF00118 TCP-1/cpn60 chaperonin family F9230_05180 PF13823 Alcohol dehydrogenase GroES-associated F9230_05180 PF00107 Zinc-binding dehydrogenase F9230_05180 PF08240 Alcohol dehydrogenase GroES-like domain F9230_05210 PF01965 DJ-1/PfpI family F9230_05215 PF12706 Beta-lactamase superfamily domain F9230_05220 PF00857 Isochorismatase family F9230_05235 PF00817 impB/mucB/samB family F9230_05235 PF13438 Domain of unknown function (DUF4113) F9230_05235 PF11799 impB/mucB/samB family C-terminal domain F9230_05240 PF01726 LexA DNA binding domain F9230_05240 PF00717 Peptidase S24-like F9230_05250 PF00199 Catalase F9230_05250 PF06628 Catalase-related immune-responsive F9230_05250 PF18011 C-terminal domain found in long catalases F9230_05255 PF04239 Protein of unknown function (DUF421) F9230_05295 PF07690 Major Facilitator Superfamily F9230_05300 PF00982 Glycosyltransferase family 20 F9230_05305 PF02358 Trehalose-phosphatase F9230_05320 PF02601 Exonuclease VII, large subunit F9230_05320 PF13742 OB-fold nucleic acid binding domain F9230_05345 PF13737 Transposase DDE domain F9230_05365 PF00589 Phage integrase family F9230_05365 PF13356 Arm DNA-binding domain F9230_05375 PF13186 Iron-sulfur cluster-binding domain F9230_05375 PF04055 Radical SAM superfamily F9230_05380 PF00884 Sulfatase F9230_05390 PF01553 Acyltransferase F9230_05410 PF03717 Penicillin-binding Protein dimerisation domain F9230_05410 PF00905 Penicillin binding protein transpeptidase domain F9230_05425 PF05191 Adenylate kinase, active site lid F9230_05435 PF10576 Iron-sulfur binding domain of endonuclease III F9230_05435 PF00633 Helix-hairpin-helix motif F9230_05435 PF00730 HhH-GPD superfamily base excision DNA repair protein F9230_05440 PF04060 Putative Fe-S cluster F9230_05445 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F9230_05445 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F9230_05455 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase F9230_05460 PF02590 Predicted SPOUT methyltransferase F9230_05465 PF04389 Peptidase family M28 F9230_05475 PF05362 Lon protease (S16) C-terminal proteolytic domain F9230_05475 PF02190 ATP-dependent protease La (LON) substrate-binding domain F9230_05475 PF00004 ATPase family associated with various cellular activities (AAA) F9230_05480 PF01812 5-formyltetrahydrofolate cyclo-ligase family F9230_05485 PF13411 MerR HTH family regulatory protein F9230_05495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_05495 PF03466 LysR substrate binding domain F9230_05500 PF01566 Natural resistance-associated macrophage protein F9230_05505 PF03746 LamB/YcsF family F9230_05510 PF07286 Protein of unknown function (DUF1445) F9230_05520 PF00289 Biotin carboxylase, N-terminal domain F9230_05520 PF00364 Biotin-requiring enzyme F9230_05520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F9230_05520 PF02785 Biotin carboxylase C-terminal domain F9230_05525 PF00158 Sigma-54 interaction domain F9230_05525 PF01590 GAF domain F9230_05525 PF02954 Bacterial regulatory protein, Fis family F9230_05535 PF00171 Aldehyde dehydrogenase family F9230_05540 PF08240 Alcohol dehydrogenase GroES-like domain F9230_05540 PF00107 Zinc-binding dehydrogenase F9230_05545 PF00701 Dihydrodipicolinate synthetase family F9230_05550 PF00596 Class II Aldolase and Adducin N-terminal domain F9230_05555 PF00155 Aminotransferase class I and II F9230_05555 PF00392 Bacterial regulatory proteins, gntR family F9230_05575 PF03695 Uncharacterised protein family (UPF0149) F9230_05580 PF05195 Aminopeptidase P, N-terminal domain F9230_05580 PF00557 Metallopeptidase family M24 F9230_05595 PF04717 Type VI secretion system, phage-baseplate injector F9230_05595 PF13296 Putative type VI secretion system Rhs element Vgr F9230_05595 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) F9230_05605 PF01494 FAD binding domain F9230_05610 PF01494 FAD binding domain F9230_05625 PF00206 Lyase F9230_05625 PF08328 Adenylosuccinate lyase C-terminal F9230_05630 PF04356 Protein of unknown function (DUF489) F9230_05640 PF00293 NUDIX domain F9230_05650 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_05655 PF00768 D-alanyl-D-alanine carboxypeptidase F9230_05655 PF07943 Penicillin-binding protein 5, C-terminal domain F9230_05685 PF00199 Catalase F9230_05695 PF01975 Survival protein SurE F9230_05700 PF01551 Peptidase family M23 F9230_05700 PF01476 LysM domain F9230_05705 PF03466 LysR substrate binding domain F9230_05705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_05710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F9230_05715 PF02021 Uncharacterised protein family UPF0102 F9230_05720 PF04972 BON domain F9230_05725 PF07859 alpha/beta hydrolase fold F9230_05730 PF00293 NUDIX domain F9230_05730 PF09297 NADH pyrophosphatase zinc ribbon domain F9230_05740 PF00929 Exonuclease F9230_05745 PF01476 LysM domain F9230_05745 PF01464 Transglycosylase SLT domain F9230_05750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9230_05755 PF00528 Binding-protein-dependent transport system inner membrane component F9230_05760 PF00528 Binding-protein-dependent transport system inner membrane component F9230_05760 PF12911 N-terminal TM domain of oligopeptide transport permease C F9230_05765 PF00005 ABC transporter F9230_05765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9230_05770 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_05770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F9230_05780 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family F9230_05805 PF00324 Amino acid permease F9230_05815 PF00324 Amino acid permease F9230_05825 PF00929 Exonuclease F9230_05830 PF01979 Amidohydrolase family F9230_05835 PF01590 GAF domain F9230_05835 PF00990 Diguanylate cyclase, GGDEF domain F9230_05835 PF00360 Phytochrome region F9230_05835 PF00563 EAL domain F9230_05840 PF00764 Arginosuccinate synthase F9230_05845 PF02652 L-lactate permease F9230_05850 PF07729 FCD domain F9230_05850 PF00392 Bacterial regulatory proteins, gntR family F9230_05855 PF01070 FMN-dependent dehydrogenase F9230_05860 PF01565 FAD binding domain F9230_05860 PF09330 D-lactate dehydrogenase, membrane binding F9230_05865 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_05865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F9230_05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_05875 PF03466 LysR substrate binding domain F9230_05885 PF07687 Peptidase dimerisation domain F9230_05885 PF01546 Peptidase family M20/M25/M40 F9230_05890 PF00202 Aminotransferase class-III F9230_05895 PF00171 Aldehyde dehydrogenase family F9230_05900 PF00324 Amino acid permease F9230_05905 PF04371 Porphyromonas-type peptidyl-arginine deiminase F9230_05920 PF00171 Aldehyde dehydrogenase family F9230_05925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F9230_05925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F9230_05930 PF00501 AMP-binding enzyme F9230_05930 PF13193 AMP-binding enzyme C-terminal domain F9230_05935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_05935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_05935 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_05940 PF00378 Enoyl-CoA hydratase/isomerase F9230_05980 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term F9230_05980 PF12833 Helix-turn-helix domain F9230_05990 PF00301 Rubredoxin F9230_05995 PF00884 Sulfatase F9230_06005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F9230_06005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9230_06005 PF11890 Domain of unknown function (DUF3410) F9230_06010 PF00152 tRNA synthetases class II (D, K and N) F9230_06015 PF01743 Poly A polymerase head domain F9230_06015 PF12627 Probable RNA and SrmB- binding site of polymerase A F9230_06020 PF01515 Phosphate acetyl/butaryl transferase F9230_06020 PF00390 Malic enzyme, N-terminal domain F9230_06020 PF03949 Malic enzyme, NAD binding domain F9230_06025 PF00498 FHA domain F9230_06025 PF00563 EAL domain F9230_06025 PF00990 Diguanylate cyclase, GGDEF domain F9230_06030 PF04452 RNA methyltransferase F9230_06035 PF02219 Methylenetetrahydrofolate reductase F9230_06040 PF05221 S-adenosyl-L-homocysteine hydrolase F9230_06040 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain F9230_06080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_06080 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_06080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_06080 PF09317 Domain of unknown function (DUF1974) F9230_06085 PF04055 Radical SAM superfamily F9230_06090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F9230_06090 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_06100 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F9230_06115 PF12704 MacB-like periplasmic core domain F9230_06115 PF02687 FtsX-like permease family F9230_06120 PF00005 ABC transporter F9230_06125 PF00753 Metallo-beta-lactamase superfamily F9230_06125 PF13567 Domain of unknown function (DUF4131) F9230_06125 PF03772 Competence protein F9230_06135 PF01343 Peptidase family S49 F9230_06135 PF06965 Na+/H+ antiporter 1 F9230_06145 PF00551 Formyl transferase F9230_06150 PF02769 AIR synthase related protein, C-terminal domain F9230_06150 PF00586 AIR synthase related protein, N-terminal domain F9230_06155 PF01594 AI-2E family transporter F9230_06160 PF00308 Bacterial dnaA protein F9230_06160 PF08299 Bacterial dnaA protein helix-turn-helix F9230_06160 PF11638 DnaA N-terminal domain F9230_06195 PF00588 SpoU rRNA Methylase family F9230_06195 PF08032 RNA 2'-O ribose methyltransferase substrate binding F9230_06200 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain F9230_06210 PF00691 OmpA family F9230_06215 PF07676 WD40-like Beta Propeller Repeat F9230_06215 PF04052 TolB amino-terminal domain F9230_06225 PF02472 Biopolymer transport protein ExbD/TolR F9230_06230 PF01618 MotA/TolQ/ExbB proton channel family F9230_06235 PF03061 Thioesterase superfamily F9230_06245 PF03069 Acetamidase/Formamidase family F9230_06250 PF17864 RuvB AAA lid domain F9230_06250 PF05491 RuvB C-terminal winged helix domain F9230_06250 PF05496 Holliday junction DNA helicase RuvB P-loop domain F9230_06255 PF01330 RuvA N terminal domain F9230_06255 PF07499 RuvA, C-terminal domain F9230_06260 PF01966 HD domain F9230_06265 PF02769 AIR synthase related protein, C-terminal domain F9230_06265 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal F9230_06265 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F9230_06280 PF01784 NIF3 (NGG1p interacting factor 3) F9230_06290 PF00881 Nitroreductase family F9230_06295 PF00378 Enoyl-CoA hydratase/isomerase F9230_06300 PF01467 Cytidylyltransferase-like F9230_06300 PF00293 NUDIX domain F9230_06305 PF04264 YceI-like domain F9230_06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_06310 PF03466 LysR substrate binding domain F9230_06315 PF01810 LysE type translocator F9230_06320 PF00578 AhpC/TSA family F9230_06335 PF06508 Queuosine biosynthesis protein QueC F9230_06340 PF04055 Radical SAM superfamily F9230_06345 PF14602 Hexapeptide repeat of succinyl-transferase F9230_06345 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal F9230_06345 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_06360 PF03466 LysR substrate binding domain F9230_06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_06365 PF12857 TOBE-like domain F9230_06365 PF00005 ABC transporter F9230_06370 PF00528 Binding-protein-dependent transport system inner membrane component F9230_06375 PF00528 Binding-protein-dependent transport system inner membrane component F9230_06395 PF02618 YceG-like family F9230_06400 PF02223 Thymidylate kinase F9230_06410 PF00890 FAD binding domain F9230_06410 PF02910 Fumarate reductase flavoprotein C-term F9230_06415 PF13180 PDZ domain F9230_06425 PF06421 GTP-binding protein LepA C-terminus F9230_06425 PF03144 Elongation factor Tu domain 2 F9230_06425 PF00009 Elongation factor Tu GTP binding domain F9230_06425 PF00679 Elongation factor G C-terminus F9230_06430 PF10502 Signal peptidase, peptidase S26 F9230_06440 PF00035 Double-stranded RNA binding motif F9230_06440 PF14622 Ribonuclease-III-like F9230_06445 PF07650 KH domain F9230_06445 PF01926 50S ribosome-binding GTPase F9230_06455 PF02565 Recombination protein O C terminal F9230_06455 PF11967 Recombination protein O N terminal F9230_06460 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ F9230_06465 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) F9230_06490 PF00892 EamA-like transporter family F9230_06495 PF00155 Aminotransferase class I and II F9230_06505 PF00990 Diguanylate cyclase, GGDEF domain F9230_06505 PF08448 PAS fold F9230_06520 PF00271 Helicase conserved C-terminal domain F9230_06520 PF17757 UvrB interaction domain F9230_06520 PF12344 Ultra-violet resistance protein B F9230_06520 PF02151 UvrB/uvrC motif F9230_06520 PF04851 Type III restriction enzyme, res subunit F9230_06530 PF00892 EamA-like transporter family F9230_06535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F9230_06535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F9230_06550 PF05368 NmrA-like family F9230_06555 PF01638 HxlR-like helix-turn-helix F9230_06560 PF01926 50S ribosome-binding GTPase F9230_06560 PF01018 GTP1/OBG F9230_06565 PF00696 Amino acid kinase family F9230_06565 PF01472 PUA domain F9230_06570 PF01569 PAP2 superfamily F9230_06575 PF07715 TonB-dependent Receptor Plug Domain F9230_06575 PF00593 TonB dependent receptor F9230_06575 PF07660 Secretin and TonB N terminus short domain F9230_06585 PF00202 Aminotransferase class-III F9230_06590 PF00282 Pyridoxal-dependent decarboxylase conserved domain F9230_06600 PF12849 PBP superfamily domain F9230_06605 PF00528 Binding-protein-dependent transport system inner membrane component F9230_06610 PF00528 Binding-protein-dependent transport system inner membrane component F9230_06615 PF00005 ABC transporter F9230_06620 PF01343 Peptidase family S49 F9230_06620 PF08496 Peptidase family S49 N-terminal F9230_06625 PF00202 Aminotransferase class-III F9230_06630 PF00462 Glutaredoxin F9230_06635 PF05362 Lon protease (S16) C-terminal proteolytic domain F9230_06635 PF13654 AAA domain F9230_06640 PF07690 Major Facilitator Superfamily F9230_06645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9230_06650 PF13593 SBF-like CPA transporter family (DUF4137) F9230_06655 PF01197 Ribosomal protein L31 F9230_06670 PF04055 Radical SAM superfamily F9230_06675 PF01132 Elongation factor P (EF-P) OB domain F9230_06675 PF08207 Elongation factor P (EF-P) KOW-like domain F9230_06675 PF09285 Elongation factor P, C-terminal F9230_06680 PF02554 Carbon starvation protein CstA F9230_06680 PF13722 5TM C-terminal transporter carbon starvation CstA F9230_06685 PF04328 Selenoprotein, putative F9230_06690 PF02558 Ketopantoate reductase PanE/ApbA F9230_06690 PF08546 Ketopantoate reductase PanE/ApbA C terminal F9230_06695 PF07726 ATPase family associated with various cellular activities (AAA) F9230_06695 PF17863 AAA lid domain F9230_06705 PF01841 Transglutaminase-like superfamily F9230_06705 PF11992 Domain of unknown function (DUF3488) F9230_06705 PF13559 Domain of unknown function (DUF4129) F9230_06715 PF00589 Phage integrase family F9230_06750 PF00199 Catalase F9230_06750 PF06628 Catalase-related immune-responsive F9230_06750 PF18011 C-terminal domain found in long catalases F9230_06805 PF05114 Protein of unknown function (DUF692) F9230_06815 PF04542 Sigma-70 region 2 F9230_06815 PF08281 Sigma-70, region 4 F9230_06830 PF00563 EAL domain F9230_06830 PF00990 Diguanylate cyclase, GGDEF domain F9230_06830 PF03707 Bacterial signalling protein N terminal repeat F9230_06835 PF13185 GAF domain F9230_06835 PF00990 Diguanylate cyclase, GGDEF domain F9230_06840 PF00512 His Kinase A (phospho-acceptor) domain F9230_06840 PF00672 HAMP domain F9230_06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_06845 PF00486 Transcriptional regulatory protein, C terminal F9230_06845 PF00072 Response regulator receiver domain F9230_06855 PF00576 HIUase/Transthyretin family F9230_06870 PF04244 Deoxyribodipyrimidine photo-lyase-related protein F9230_06875 PF00293 NUDIX domain F9230_06875 PF09297 NADH pyrophosphatase zinc ribbon domain F9230_06915 PF00512 His Kinase A (phospho-acceptor) domain F9230_06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_06915 PF08521 Two-component sensor kinase N-terminal F9230_06920 PF00072 Response regulator receiver domain F9230_06920 PF00486 Transcriptional regulatory protein, C terminal F9230_06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_06935 PF03466 LysR substrate binding domain F9230_06940 PF00291 Pyridoxal-phosphate dependent enzyme F9230_06945 PF00290 Tryptophan synthase alpha chain F9230_06950 PF00925 GTP cyclohydrolase II F9230_06955 PF00210 Ferritin-like domain F9230_06960 PF00375 Sodium:dicarboxylate symporter family F9230_07080 PF00419 Fimbrial protein F9230_07085 PF13953 PapC C-terminal domain F9230_07085 PF13954 PapC N-terminal domain F9230_07085 PF00577 Outer membrane usher protein F9230_07090 PF02753 Pili assembly chaperone PapD, C-terminal domain F9230_07090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F9230_07095 PF16970 Type-1 fimbrial protein, A F9230_07120 PF13438 Domain of unknown function (DUF4113) F9230_07120 PF00817 impB/mucB/samB family F9230_07120 PF11799 impB/mucB/samB family C-terminal domain F9230_07125 PF00717 Peptidase S24-like F9230_07125 PF01726 LexA DNA binding domain F9230_07145 PF02272 DHHA1 domain F9230_07145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F9230_07145 PF01411 tRNA synthetases class II (A) F9230_07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_07150 PF03466 LysR substrate binding domain F9230_07160 PF02472 Biopolymer transport protein ExbD/TolR F9230_07165 PF01618 MotA/TolQ/ExbB proton channel family F9230_07170 PF03544 Gram-negative bacterial TonB protein C-terminal F9230_07175 PF13417 Glutathione S-transferase, N-terminal domain F9230_07175 PF00043 Glutathione S-transferase, C-terminal domain F9230_07180 PF07715 TonB-dependent Receptor Plug Domain F9230_07180 PF00593 TonB dependent receptor F9230_07185 PF00296 Luciferase-like monooxygenase F9230_07190 PF07687 Peptidase dimerisation domain F9230_07190 PF01546 Peptidase family M20/M25/M40 F9230_07195 PF00296 Luciferase-like monooxygenase F9230_07200 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9230_07210 PF00528 Binding-protein-dependent transport system inner membrane component F9230_07215 PF00005 ABC transporter F9230_07220 PF00266 Aminotransferase class-V F9230_07245 PF00535 Glycosyl transferase family 2 F9230_07245 PF13181 Tetratricopeptide repeat F9230_07250 PF02321 Outer membrane efflux protein F9230_07255 PF03412 Peptidase C39 family F9230_07255 PF00005 ABC transporter F9230_07255 PF00664 ABC transporter transmembrane region F9230_07260 PF00529 HlyD membrane-fusion protein of T1SS F9230_07265 PF00892 EamA-like transporter family F9230_07270 PF00155 Aminotransferase class I and II F9230_07270 PF00392 Bacterial regulatory proteins, gntR family F9230_07285 PF00593 TonB dependent receptor F9230_07285 PF07715 TonB-dependent Receptor Plug Domain F9230_07290 PF16220 Domain of unknown function (DUF4880) F9230_07290 PF04773 FecR protein F9230_07300 PF13533 Biotin-lipoyl like F9230_07305 PF00873 AcrB/AcrD/AcrF family F9230_07310 PF00873 AcrB/AcrD/AcrF family F9230_07315 PF02321 Outer membrane efflux protein F9230_07325 PF02417 Chromate transporter F9230_07330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_07330 PF03466 LysR substrate binding domain F9230_07335 PF07969 Amidohydrolase family F9230_07345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9230_07350 PF00005 ABC transporter F9230_07365 PF00849 RNA pseudouridylate synthase F9230_07370 PF12137 RNA polymerase recycling family C-terminal F9230_07370 PF18339 RapA N-terminal Tudor like domain 1 F9230_07370 PF18337 RapA N-terminal Tudor like domain F9230_07370 PF00271 Helicase conserved C-terminal domain F9230_07370 PF00176 SNF2 family N-terminal domain F9230_07385 PF00440 Bacterial regulatory proteins, tetR family F9230_07390 PF00175 Oxidoreductase NAD-binding domain F9230_07390 PF00111 2Fe-2S iron-sulfur cluster binding domain F9230_07390 PF00970 Oxidoreductase FAD-binding domain F9230_07395 PF00487 Fatty acid desaturase F9230_07410 PF07759 Protein of unknown function (DUF1615) F9230_07425 PF00313 'Cold-shock' DNA-binding domain F9230_07450 PF01638 HxlR-like helix-turn-helix F9230_07455 PF08240 Alcohol dehydrogenase GroES-like domain F9230_07455 PF00107 Zinc-binding dehydrogenase F9230_07465 PF00313 'Cold-shock' DNA-binding domain F9230_07475 PF01292 Prokaryotic cytochrome b561 F9230_07495 PF02954 Bacterial regulatory protein, Fis family F9230_07505 PF09588 YqaJ-like viral recombinase domain F9230_07545 PF00717 Peptidase S24-like F9230_07545 PF01381 Helix-turn-helix F9230_07575 PF00145 C-5 cytosine-specific DNA methylase F9230_07745 PF00959 Phage lysozyme F9230_07750 PF00313 'Cold-shock' DNA-binding domain F9230_07785 PF00589 Phage integrase family F9230_07790 PF01207 Dihydrouridine synthase (Dus) F9230_07795 PF03060 Nitronate monooxygenase F9230_07820 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_07820 PF13192 Thioredoxin domain F9230_07840 PF00155 Aminotransferase class I and II F9230_07845 PF01641 SelR domain F9230_07850 PF00255 Glutathione peroxidase F9230_07865 PF00593 TonB dependent receptor F9230_07865 PF07715 TonB-dependent Receptor Plug Domain F9230_07870 PF00155 Aminotransferase class I and II F9230_07875 PF01966 HD domain F9230_07875 PF08335 GlnD PII-uridylyltransferase F9230_07875 PF01909 Nucleotidyltransferase domain F9230_07880 PF02222 ATP-grasp domain F9230_07885 PF05437 Branched-chain amino acid transport protein (AzlD) F9230_07890 PF03591 AzlC protein F9230_07900 PF13545 Crp-like helix-turn-helix domain F9230_07900 PF00027 Cyclic nucleotide-binding domain F9230_07915 PF06071 Protein of unknown function (DUF933) F9230_07915 PF01926 50S ribosome-binding GTPase F9230_07920 PF00528 Binding-protein-dependent transport system inner membrane component F9230_07925 PF00005 ABC transporter F9230_07925 PF09383 NIL domain F9230_07930 PF03180 NLPA lipoprotein F9230_07935 PF03180 NLPA lipoprotein F9230_07940 PF00296 Luciferase-like monooxygenase F9230_07950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_07950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain F9230_07965 PF04229 GrpB protein F9230_07970 PF01709 Transcriptional regulator F9230_07975 PF01553 Acyltransferase F9230_08015 PF01527 Transposase F9230_08020 PF02545 Maf-like protein F9230_08030 PF00162 Phosphoglycerate kinase F9230_08040 PF01116 Fructose-bisphosphate aldolase class-II F9230_08055 PF00881 Nitroreductase family F9230_08065 PF00149 Calcineurin-like phosphoesterase F9230_08070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F9230_08075 PF00749 tRNA synthetases class I (E and Q), catalytic domain F9230_08075 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain F9230_08080 PF01062 Bestrophin, RFP-TM, chloride channel F9230_08105 PF05958 tRNA (Uracil-5-)-methyltransferase F9230_08110 PF00171 Aldehyde dehydrogenase family F9230_08110 PF01619 Proline dehydrogenase F9230_08110 PF14850 DNA-binding domain of Proline dehydrogenase F9230_08110 PF18327 Proline utilization A proline dehydrogenase N-terminal domain F9230_08115 PF01037 Lrp/AsnC ligand binding domain F9230_08120 PF00474 Sodium:solute symporter family F9230_08135 PF03461 TRCF domain F9230_08135 PF02559 CarD-like/TRCF domain F9230_08135 PF00270 DEAD/DEAH box helicase F9230_08135 PF00271 Helicase conserved C-terminal domain F9230_08135 PF17757 UvrB interaction domain F9230_08145 PF00211 Adenylate and Guanylate cyclase catalytic domain F9230_08150 PF00111 2Fe-2S iron-sulfur cluster binding domain F9230_08155 PF00012 Hsp70 protein F9230_08160 PF07743 HSCB C-terminal oligomerisation domain F9230_08160 PF00226 DnaJ domain F9230_08165 PF01521 Iron-sulphur cluster biosynthesis F9230_08170 PF01592 NifU-like N terminal domain F9230_08175 PF00266 Aminotransferase class-V F9230_08180 PF02082 Transcriptional regulator F9230_08195 PF00216 Bacterial DNA-binding protein F9230_08220 PF00267 Gram-negative porin F9230_08225 PF01230 HIT domain F9230_08270 PF07690 Major Facilitator Superfamily F9230_08280 PF08240 Alcohol dehydrogenase GroES-like domain F9230_08280 PF00107 Zinc-binding dehydrogenase F9230_08285 PF02668 Taurine catabolism dioxygenase TauD, TfdA family F9230_08290 PF05853 beta-keto acid cleavage enzyme F9230_08295 PF07690 Major Facilitator Superfamily F9230_08310 PF03601 Conserved hypothetical protein 698 F9230_08340 PF00501 AMP-binding enzyme F9230_08340 PF13193 AMP-binding enzyme C-terminal domain F9230_08350 PF00285 Citrate synthase, C-terminal domain F9230_08370 PF02542 YgbB family F9230_08380 PF00793 DAHP synthetase I family F9230_08385 PF01925 Sulfite exporter TauE/SafE F9230_08410 PF02684 Lipid-A-disaccharide synthetase F9230_08415 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding F9230_08415 PF18381 YcaO cyclodehydratase C-terminal domain F9230_08420 PF12852 Cupin F9230_08420 PF12833 Helix-turn-helix domain F9230_08425 PF00487 Fatty acid desaturase F9230_08430 PF04073 Aminoacyl-tRNA editing domain F9230_08435 PF06276 Ferric iron reductase FhuF-like transporter F9230_08435 PF04183 IucA / IucC family F9230_08440 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) F9230_08445 PF06276 Ferric iron reductase FhuF-like transporter F9230_08445 PF04183 IucA / IucC family F9230_08460 PF07690 Major Facilitator Superfamily F9230_08465 PF07715 TonB-dependent Receptor Plug Domain F9230_08465 PF00593 TonB dependent receptor F9230_08475 PF04172 LrgB-like family F9230_08480 PF03788 LrgA family F9230_08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_08485 PF03466 LysR substrate binding domain F9230_08490 PF13419 Haloacid dehalogenase-like hydrolase F9230_08495 PF01638 HxlR-like helix-turn-helix F9230_08515 PF02635 DsrE/DsrF-like family F9230_08520 PF00589 Phage integrase family F9230_08560 PF00717 Peptidase S24-like F9230_08560 PF01381 Helix-turn-helix F9230_08655 PF06074 Protein of unknown function (DUF935) F9230_08790 PF00664 ABC transporter transmembrane region F9230_08790 PF00005 ABC transporter F9230_08790 PF03412 Peptidase C39 family F9230_08815 PF06316 Enterobacterial Ail/Lom protein F9230_08830 PF01047 MarR family F9230_08835 PF16363 GDP-mannose 4,6 dehydratase F9230_08840 PF10415 Fumarase C C-terminus F9230_08840 PF00206 Lyase F9230_08880 PF00106 short chain dehydrogenase F9230_08885 PF06865 Pyrimidine/purine nucleoside phosphorylase F9230_08905 PF13091 PLD-like domain F9230_08910 PF08240 Alcohol dehydrogenase GroES-like domain F9230_08910 PF00107 Zinc-binding dehydrogenase F9230_08920 PF00487 Fatty acid desaturase F9230_08925 PF03707 Bacterial signalling protein N terminal repeat F9230_08925 PF00990 Diguanylate cyclase, GGDEF domain F9230_08925 PF00563 EAL domain F9230_08930 PF00793 DAHP synthetase I family F9230_08935 PF00437 Type II/IV secretion system protein F9230_08940 PF07690 Major Facilitator Superfamily F9230_08945 PF01597 Glycine cleavage H-protein F9230_08950 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term F9230_08950 PF12833 Helix-turn-helix domain F9230_08955 PF00664 ABC transporter transmembrane region F9230_08955 PF00005 ABC transporter F9230_08965 PF00924 Mechanosensitive ion channel F9230_08970 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) F9230_08980 PF00375 Sodium:dicarboxylate symporter family F9230_08985 PF00916 Sulfate permease family F9230_08985 PF01740 STAS domain F9230_08995 PF12697 Alpha/beta hydrolase family F9230_09000 PF00296 Luciferase-like monooxygenase F9230_09005 PF00857 Isochorismatase family F9230_09010 PF01042 Endoribonuclease L-PSP F9230_09015 PF01613 Flavin reductase like domain F9230_09020 PF00860 Permease family F9230_09025 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F9230_09025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F9230_09030 PF00291 Pyridoxal-phosphate dependent enzyme F9230_09035 PF08360 QacR-like protein, C-terminal region F9230_09035 PF00440 Bacterial regulatory proteins, tetR family F9230_09040 PF02803 Thiolase, C-terminal domain F9230_09040 PF00108 Thiolase, N-terminal domain F9230_09045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_09045 PF03466 LysR substrate binding domain F9230_09060 PF02785 Biotin carboxylase C-terminal domain F9230_09060 PF00289 Biotin carboxylase, N-terminal domain F9230_09060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F9230_09070 PF02785 Biotin carboxylase C-terminal domain F9230_09070 PF00289 Biotin carboxylase, N-terminal domain F9230_09070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F9230_09075 PF00364 Biotin-requiring enzyme F9230_09080 PF01220 Dehydroquinase class II F9230_09085 PF12146 Serine aminopeptidase, S33 F9230_09090 PF02803 Thiolase, C-terminal domain F9230_09090 PF00108 Thiolase, N-terminal domain F9230_09095 PF01144 Coenzyme A transferase F9230_09100 PF01144 Coenzyme A transferase F9230_09105 PF03594 Benzoate membrane transport protein F9230_09110 PF00106 short chain dehydrogenase F9230_09115 PF00970 Oxidoreductase FAD-binding domain F9230_09115 PF00111 2Fe-2S iron-sulfur cluster binding domain F9230_09115 PF00175 Oxidoreductase NAD-binding domain F9230_09120 PF00866 Ring hydroxylating beta subunit F9230_09125 PF00848 Ring hydroxylating alpha subunit (catalytic domain) F9230_09125 PF00355 Rieske [2Fe-2S] domain F9230_09130 PF00775 Dioxygenase F9230_09130 PF04444 Catechol dioxygenase N terminus F9230_09135 PF02426 Muconolactone delta-isomerase F9230_09140 PF13378 Enolase C-terminal domain-like F9230_09140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F9230_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_09145 PF03466 LysR substrate binding domain F9230_09150 PF07690 Major Facilitator Superfamily F9230_09165 PF00106 short chain dehydrogenase F9230_09170 PF01545 Cation efflux family F9230_09185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9230_09185 PF00529 HlyD membrane-fusion protein of T1SS F9230_09190 PF00873 AcrB/AcrD/AcrF family F9230_09200 PF00593 TonB dependent receptor F9230_09200 PF07715 TonB-dependent Receptor Plug Domain F9230_09205 PF00593 TonB dependent receptor F9230_09205 PF07715 TonB-dependent Receptor Plug Domain F9230_09225 PF00710 Asparaginase, N-terminal F9230_09225 PF17763 Glutaminase/Asparaginase C-terminal domain F9230_09245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_09245 PF03466 LysR substrate binding domain F9230_09260 PF04055 Radical SAM superfamily F9230_09265 PF00676 Dehydrogenase E1 component F9230_09270 PF02780 Transketolase, C-terminal domain F9230_09270 PF02779 Transketolase, pyrimidine binding domain F9230_09275 PF02817 e3 binding domain F9230_09275 PF00364 Biotin-requiring enzyme F9230_09275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F9230_09280 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_09280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F9230_09290 PF08240 Alcohol dehydrogenase GroES-like domain F9230_09290 PF00107 Zinc-binding dehydrogenase F9230_09295 PF09905 DNA-binding protein VF530 F9230_09315 PF00440 Bacterial regulatory proteins, tetR family F9230_09335 PF00691 OmpA family F9230_09335 PF05736 OprF membrane domain F9230_09345 PF06761 Intracellular multiplication and human macrophage-killing F9230_09345 PF06744 Type VI secretion protein IcmF C-terminal F9230_09345 PF14331 ImcF-related N-terminal domain F9230_09360 PF05947 Type VI secretion system, TssF F9230_09375 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath F9230_09390 PF00004 ATPase family associated with various cellular activities (AAA) F9230_09390 PF07724 AAA domain (Cdc48 subfamily) F9230_09390 PF17871 AAA lid domain F9230_09390 PF10431 C-terminal, D2-small domain, of ClpB protein F9230_09395 PF06812 ImpA, N-terminal, type VI secretion system F9230_09400 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE F9230_09420 PF12697 Alpha/beta hydrolase family F9230_09425 PF04273 Putative phosphatase (DUF442) F9230_09425 PF00753 Metallo-beta-lactamase superfamily F9230_09435 PF04143 Sulphur transport F9230_09465 PF00005 ABC transporter F9230_09480 PF00893 Small Multidrug Resistance protein F9230_09490 PF01402 Ribbon-helix-helix protein, copG family F9230_09490 PF08753 NikR C terminal nickel binding domain F9230_09500 PF15887 Putative zinc-binding metallo-peptidase F9230_09500 PF10005 zinc-ribbon domain F9230_09515 PF12832 MFS_1 like family F9230_09520 PF01425 Amidase F9230_09525 PF00072 Response regulator receiver domain F9230_09525 PF00990 Diguanylate cyclase, GGDEF domain F9230_09535 PF01266 FAD dependent oxidoreductase F9230_09545 PF01264 Chorismate synthase F9230_09550 PF05175 Methyltransferase small domain F9230_09565 PF03109 ABC1 family F9230_09570 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_09570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_09570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_09575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_09575 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_09575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_09625 PF02881 SRP54-type protein, helical bundle domain F9230_09625 PF00448 SRP54-type protein, GTPase domain F9230_09630 PF00675 Insulinase (Peptidase family M16) F9230_09630 PF05193 Peptidase M16 inactive domain F9230_09660 PF00571 CBS domain F9230_09660 PF01380 SIS domain F9230_09665 PF00291 Pyridoxal-phosphate dependent enzyme F9230_09675 PF00004 ATPase family associated with various cellular activities (AAA) F9230_09675 PF17862 AAA+ lid domain F9230_09675 PF01434 Peptidase family M41 F9230_09685 PF05166 YcgL domain F9230_09690 PF01612 3'-5' exonuclease F9230_09690 PF00570 HRDC domain F9230_09695 PF13662 Toprim domain F9230_09695 PF02132 RecR protein F9230_09700 PF02575 YbaB/EbfC DNA-binding family F9230_09705 PF01053 Cys/Met metabolism PLP-dependent enzyme F9230_09715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F9230_09715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F9230_09790 PF01527 Transposase F9230_09800 PF08007 Cupin superfamily protein F9230_09805 PF07730 Histidine kinase F9230_09810 PF00196 Bacterial regulatory proteins, luxR family F9230_09810 PF00072 Response regulator receiver domain F9230_09815 PF01645 Conserved region in glutamate synthase F9230_09830 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F9230_09830 PF01565 FAD binding domain F9230_09835 PF01451 Low molecular weight phosphotyrosine protein phosphatase F9230_09840 PF00465 Iron-containing alcohol dehydrogenase F9230_09845 PF03061 Thioesterase superfamily F9230_09850 PF12169 DNA polymerase III subunits gamma and tau domain III F9230_09850 PF12170 DNA polymerase III tau subunit V interacting with alpha F9230_09850 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding F9230_09880 PF00108 Thiolase, N-terminal domain F9230_09880 PF02803 Thiolase, C-terminal domain F9230_09895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_09895 PF03466 LysR substrate binding domain F9230_09900 PF00923 Transaldolase/Fructose-6-phosphate aldolase F9230_09905 PF01810 LysE type translocator F9230_09910 PF03594 Benzoate membrane transport protein F9230_09915 PF00440 Bacterial regulatory proteins, tetR family F9230_09920 PF00893 Small Multidrug Resistance protein F9230_09925 PF00135 Carboxylesterase family F9230_09935 PF00582 Universal stress protein family F9230_09945 PF11940 Domain of unknown function (DUF3458) Ig-like fold F9230_09945 PF17432 Domain of unknown function (DUF3458_C) ARM repeats F9230_09945 PF01433 Peptidase family M1 domain F9230_09960 PF02110 Hydroxyethylthiazole kinase family F9230_09970 PF03471 Transporter associated domain F9230_09970 PF03741 Integral membrane protein TerC family F9230_09990 PF01274 Malate synthase F9230_09995 PF03969 AFG1-like ATPase F9230_10005 PF00743 Flavin-binding monooxygenase-like F9230_10010 PF03956 Lysine exporter LysO F9230_10015 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F9230_10025 PF00216 Bacterial DNA-binding protein F9230_10030 PF00575 S1 RNA binding domain F9230_10035 PF02224 Cytidylate kinase F9230_10045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F9230_10055 PF03167 Uracil DNA glycosylase superfamily F9230_10065 PF03934 Type II secretion system (T2SS), protein K F9230_10070 PF07963 Prokaryotic N-terminal methylation motif F9230_10070 PF11612 Type II secretion system (T2SS), protein J F9230_10075 PF07963 Prokaryotic N-terminal methylation motif F9230_10075 PF02501 Type II secretion system (T2SS), protein I F9230_10080 PF07963 Prokaryotic N-terminal methylation motif F9230_10090 PF01026 TatD related DNase F9230_10100 PF09115 DNA polymerase III, delta subunit, C terminal F9230_10105 PF02348 Cytidylyltransferase F9230_10110 PF02606 Tetraacyldisaccharide-1-P 4'-kinase F9230_10115 PF00664 ABC transporter transmembrane region F9230_10115 PF00005 ABC transporter F9230_10125 PF01618 MotA/TolQ/ExbB proton channel family F9230_10130 PF17762 HTH domain found in ParB protein F9230_10130 PF02195 ParB-like nuclease domain F9230_10135 PF13614 AAA domain F9230_10140 PF02527 rRNA small subunit methyltransferase G F9230_10145 PF00483 Nucleotidyl transferase F9230_10150 PF01636 Phosphotransferase enzyme family F9230_10155 PF03968 OstA-like protein F9230_10155 PF04453 LPS transport system D F9230_10160 PF00639 PPIC-type PPIASE domain F9230_10160 PF09312 SurA N-terminal domain F9230_10165 PF17209 Hfq protein F9230_10175 PF01119 DNA mismatch repair protein, C-terminal domain F9230_10175 PF08676 MutL C terminal dimerisation domain F9230_10180 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE F9230_10185 PF00849 RNA pseudouridylate synthase F9230_10185 PF01479 S4 domain F9230_10200 PF01479 S4 domain F9230_10200 PF00849 RNA pseudouridylate synthase F9230_10205 PF04284 Protein of unknown function (DUF441) F9230_10210 PF07690 Major Facilitator Superfamily F9230_10215 PF00027 Cyclic nucleotide-binding domain F9230_10215 PF00520 Ion transport protein F9230_10220 PF05970 PIF1-like helicase F9230_10220 PF14493 Helix-turn-helix domain F9230_10230 PF00465 Iron-containing alcohol dehydrogenase F9230_10245 PF00171 Aldehyde dehydrogenase family F9230_10255 PF13520 Amino acid permease F9230_10260 PF06751 Ethanolamine ammonia lyase large subunit (EutB) F9230_10265 PF05985 Ethanolamine ammonia-lyase light chain (EutC) F9230_10270 PF01323 DSBA-like thioredoxin domain F9230_10275 PF00106 short chain dehydrogenase F9230_10285 PF00117 Glutamine amidotransferase class-I F9230_10285 PF00958 GMP synthase C terminal domain F9230_10285 PF02540 NAD synthase F9230_10290 PF04264 YceI-like domain F9230_10295 PF00583 Acetyltransferase (GNAT) family F9230_10305 PF02779 Transketolase, pyrimidine binding domain F9230_10305 PF00456 Transketolase, thiamine diphosphate binding domain F9230_10305 PF02780 Transketolase, C-terminal domain F9230_10310 PF02773 S-adenosylmethionine synthetase, C-terminal domain F9230_10310 PF02772 S-adenosylmethionine synthetase, central domain F9230_10310 PF00438 S-adenosylmethionine synthetase, N-terminal domain F9230_10325 PF01810 LysE type translocator F9230_10335 PF02075 Crossover junction endodeoxyribonuclease RuvC F9230_10350 PF00155 Aminotransferase class I and II F9230_10360 PF00202 Aminotransferase class-III F9230_10365 PF02581 Thiamine monophosphate synthase F9230_10400 PF00675 Insulinase (Peptidase family M16) F9230_10400 PF05193 Peptidase M16 inactive domain F9230_10405 PF02567 Phenazine biosynthesis-like protein F9230_10410 PF00375 Sodium:dicarboxylate symporter family F9230_10415 PF01613 Flavin reductase like domain F9230_10430 PF00180 Isocitrate/isopropylmalate dehydrogenase F9230_10435 PF00849 RNA pseudouridylate synthase F9230_10445 PF03971 Monomeric isocitrate dehydrogenase F9230_10450 PF00576 HIUase/Transthyretin family F9230_10460 PF07943 Penicillin-binding protein 5, C-terminal domain F9230_10460 PF00768 D-alanyl-D-alanine carboxypeptidase F9230_10465 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_10470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9230_10475 PF00708 Acylphosphatase F9230_10480 PF01256 Carbohydrate kinase F9230_10480 PF03853 YjeF-related protein N-terminus F9230_10485 PF08331 Domain of unknown function (DUF1730) F9230_10490 PF04055 Radical SAM superfamily F9230_10490 PF06968 Biotin and Thiamin Synthesis associated domain F9230_10505 PF13193 AMP-binding enzyme C-terminal domain F9230_10505 PF00501 AMP-binding enzyme F9230_10510 PF00756 Putative esterase F9230_10525 PF00285 Citrate synthase, C-terminal domain F9230_10535 PF00440 Bacterial regulatory proteins, tetR family F9230_10540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F9230_10540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F9230_10550 PF02694 Uncharacterised BCR, YnfA/UPF0060 family F9230_10555 PF07724 AAA domain (Cdc48 subfamily) F9230_10555 PF00004 ATPase family associated with various cellular activities (AAA) F9230_10555 PF17871 AAA lid domain F9230_10555 PF02861 Clp amino terminal domain, pathogenicity island component F9230_10555 PF10431 C-terminal, D2-small domain, of ClpB protein F9230_10560 PF02617 ATP-dependent Clp protease adaptor protein ClpS F9230_10570 PF01118 Semialdehyde dehydrogenase, NAD binding domain F9230_10570 PF02774 Semialdehyde dehydrogenase, dimerisation domain F9230_10575 PF00990 Diguanylate cyclase, GGDEF domain F9230_10575 PF17151 Periplasmic sensor domain F9230_10585 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) F9230_10590 PF00291 Pyridoxal-phosphate dependent enzyme F9230_10590 PF00585 C-terminal regulatory domain of Threonine dehydratase F9230_10600 PF02080 TrkA-C domain F9230_10600 PF02254 TrkA-N domain F9230_10605 PF02386 Cation transport protein F9230_10610 PF02253 Phospholipase A1 F9230_10615 PF00675 Insulinase (Peptidase family M16) F9230_10615 PF05193 Peptidase M16 inactive domain F9230_10615 PF08367 Peptidase M16C associated F9230_10625 PF00294 pfkB family carbohydrate kinase F9230_10635 PF07290 Protein of unknown function (DUF1449) F9230_10645 PF01654 Cytochrome bd terminal oxidase subunit I F9230_10650 PF02322 Cytochrome bd terminal oxidase subunit II F9230_10655 PF08173 Membrane bound YbgT-like protein F9230_10670 PF02028 BCCT, betaine/carnitine/choline family transporter F9230_10675 PF00440 Bacterial regulatory proteins, tetR family F9230_10675 PF13977 BetI-type transcriptional repressor, C-terminal F9230_10680 PF00171 Aldehyde dehydrogenase family F9230_10685 PF05199 GMC oxidoreductase F9230_10685 PF00732 GMC oxidoreductase F9230_10690 PF06039 Malate:quinone oxidoreductase (Mqo) F9230_10705 PF01098 Cell cycle protein F9230_10710 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F9230_10715 PF04977 Septum formation initiator F9230_10720 PF00113 Enolase, C-terminal TIM barrel domain F9230_10720 PF03952 Enolase, N-terminal domain F9230_10725 PF00793 DAHP synthetase I family F9230_10730 PF06418 CTP synthase N-terminus F9230_10730 PF00117 Glutamine amidotransferase class-I F9230_10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_10740 PF03466 LysR substrate binding domain F9230_10745 PF00248 Aldo/keto reductase family F9230_10750 PF07690 Major Facilitator Superfamily F9230_10765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F9230_10765 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_10775 PF12697 Alpha/beta hydrolase family F9230_10785 PF03737 Aldolase/RraA F9230_10790 PF13460 NAD(P)H-binding F9230_10795 PF01649 Ribosomal protein S20 F9230_10800 PF12561 ToxR activated gene A lipoprotein domain F9230_10800 PF00041 Fibronectin type III domain F9230_10815 PF00459 Inositol monophosphatase family F9230_10830 PF13419 Haloacid dehalogenase-like hydrolase F9230_10835 PF01479 S4 domain F9230_10840 PF00154 recA bacterial DNA recombination protein F9230_10845 PF02631 RecX family F9230_10860 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 F9230_10860 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_10865 PF07977 FabA-like domain F9230_10870 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_10870 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD F9230_10880 PF01103 Surface antigen F9230_10880 PF07244 Surface antigen variable number repeat F9230_10885 PF02163 Peptidase family M50 F9230_10885 PF17820 PDZ domain F9230_10885 PF13180 PDZ domain F9230_10890 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F9230_10890 PF13288 DXP reductoisomerase C-terminal domain F9230_10890 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F9230_10900 PF01255 Putative undecaprenyl diphosphate synthase F9230_10905 PF01765 Ribosome recycling factor F9230_10910 PF00696 Amino acid kinase family F9230_10915 PF18693 TRAM domain F9230_10915 PF00919 Uncharacterized protein family UPF0004 F9230_10915 PF04055 Radical SAM superfamily F9230_10920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_10920 PF00512 His Kinase A (phospho-acceptor) domain F9230_10920 PF00989 PAS fold F9230_10925 PF02954 Bacterial regulatory protein, Fis family F9230_10925 PF00072 Response regulator receiver domain F9230_10925 PF00158 Sigma-54 interaction domain F9230_10935 PF13291 ACT domain F9230_10935 PF04607 Region found in RelA / SpoT proteins F9230_10935 PF02824 TGS domain F9230_10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_10940 PF03466 LysR substrate binding domain F9230_10945 PF00557 Metallopeptidase family M24 F9230_10950 PF05525 Branched-chain amino acid transport protein F9230_10970 PF00324 Amino acid permease F9230_10975 PF01037 Lrp/AsnC ligand binding domain F9230_10980 PF03616 Sodium/glutamate symporter F9230_10985 PF00593 TonB dependent receptor F9230_10985 PF07715 TonB-dependent Receptor Plug Domain F9230_11000 PF00330 Aconitase family (aconitate hydratase) F9230_11000 PF11791 Aconitate B N-terminal domain F9230_11000 PF06434 Aconitate hydratase 2 N-terminus F9230_11030 PF17243 POTRA domain TamA domain 1 F9230_11030 PF07244 Surface antigen variable number repeat F9230_11030 PF01103 Surface antigen F9230_11035 PF07690 Major Facilitator Superfamily F9230_11040 PF03232 Ubiquinone biosynthesis protein COQ7 F9230_11055 PF02152 Dihydroneopterin aldolase F9230_11060 PF03109 ABC1 family F9230_11065 PF00899 ThiF family F9230_11070 PF13193 AMP-binding enzyme C-terminal domain F9230_11070 PF00501 AMP-binding enzyme F9230_11075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_11075 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_11075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_11080 PF00106 short chain dehydrogenase F9230_11085 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term F9230_11085 PF12833 Helix-turn-helix domain F9230_11105 PF09084 NMT1/THI5 like F9230_11110 PF00528 Binding-protein-dependent transport system inner membrane component F9230_11115 PF13847 Methyltransferase domain F9230_11115 PF17827 PrmC N-terminal domain F9230_11120 PF03462 PCRF domain F9230_11120 PF00472 RF-1 domain F9230_11135 PF00296 Luciferase-like monooxygenase F9230_11150 PF03618 Kinase/pyrophosphorylase F9230_11155 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain F9230_11155 PF02896 PEP-utilising enzyme, TIM barrel domain F9230_11155 PF00391 PEP-utilising enzyme, mobile domain F9230_11165 PF06481 COX Aromatic Rich Motif F9230_11165 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F9230_11170 PF00115 Cytochrome C and Quinol oxidase polypeptide I F9230_11175 PF00510 Cytochrome c oxidase subunit III F9230_11180 PF03626 Prokaryotic Cytochrome C oxidase subunit IV F9230_11185 PF01040 UbiA prenyltransferase family F9230_11200 PF01250 Ribosomal protein S6 F9230_11205 PF01084 Ribosomal protein S18 F9230_11210 PF03948 Ribosomal protein L9, C-terminal domain F9230_11210 PF01281 Ribosomal protein L9, N-terminal domain F9230_11215 PF00772 DnaB-like helicase N terminal domain F9230_11215 PF03796 DnaB-like helicase C terminal domain F9230_11220 PF00842 Alanine racemase, C-terminal domain F9230_11220 PF01168 Alanine racemase, N-terminal domain F9230_11235 PF01841 Transglutaminase-like superfamily F9230_11235 PF08379 Bacterial transglutaminase-like N-terminal region F9230_11245 PF14403 Circularly permuted ATP-grasp type 2 F9230_11260 PF01134 Glucose inhibited division protein A F9230_11260 PF13932 GidA associated domain F9230_11290 PF02954 Bacterial regulatory protein, Fis family F9230_11295 PF01808 AICARFT/IMPCHase bienzyme F9230_11295 PF02142 MGS-like domain F9230_11300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F9230_11300 PF02843 Phosphoribosylglycinamide synthetase, C domain F9230_11300 PF02844 Phosphoribosylglycinamide synthetase, N domain F9230_11305 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term F9230_11305 PF12833 Helix-turn-helix domain F9230_11310 PF00378 Enoyl-CoA hydratase/isomerase F9230_11310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F9230_11310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F9230_11315 PF03180 NLPA lipoprotein F9230_11320 PF00005 ABC transporter F9230_11320 PF09383 NIL domain F9230_11325 PF00528 Binding-protein-dependent transport system inner membrane component F9230_11335 PF07733 Bacterial DNA polymerase III alpha NTPase domain F9230_11335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F9230_11335 PF14579 Helix-hairpin-helix motif F9230_11335 PF02811 PHP domain F9230_11335 PF01336 OB-fold nucleic acid binding domain F9230_11340 PF00588 SpoU rRNA Methylase family F9230_11345 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_11360 PF00488 MutS domain V F9230_11360 PF01624 MutS domain I F9230_11360 PF05188 MutS domain II F9230_11360 PF05192 MutS domain III F9230_11360 PF05190 MutS family domain IV F9230_11365 PF00037 4Fe-4S binding domain F9230_11365 PF11953 Domain of unknown function (DUF3470) F9230_11375 PF01596 O-methyltransferase F9230_11385 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_11385 PF14602 Hexapeptide repeat of succinyl-transferase F9230_11385 PF12804 MobA-like NTP transferase domain F9230_11390 PF01205 Uncharacterized protein family UPF0029 F9230_11395 PF00005 ABC transporter F9230_11395 PF12399 Branched-chain amino acid ATP-binding cassette transporter F9230_11400 PF03968 OstA-like protein F9230_11415 PF01380 SIS domain F9230_11415 PF00571 CBS domain F9230_11420 PF02654 Cobalamin-5-phosphate synthase F9230_11425 PF00300 Histidine phosphatase superfamily (branch 1) F9230_11430 PF02277 Phosphoribosyltransferase F9230_11435 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase F9230_11450 PF01406 tRNA synthetases class I (C) catalytic domain F9230_11450 PF09190 DALR domain F9230_11455 PF02391 MoaE protein F9230_11465 PF04055 Radical SAM superfamily F9230_11465 PF06463 Molybdenum Cofactor Synthesis C F9230_11470 PF12804 MobA-like NTP transferase domain F9230_11475 PF01568 Molydopterin dinucleotide binding domain F9230_11475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F9230_11475 PF04324 BFD-like [2Fe-2S] binding domain F9230_11475 PF00384 Molybdopterin oxidoreductase F9230_11480 PF04324 BFD-like [2Fe-2S] binding domain F9230_11480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F9230_11480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F9230_11480 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_11480 PF18267 Rubredoxin NAD+ reductase C-terminal domain F9230_11485 PF04324 BFD-like [2Fe-2S] binding domain F9230_11485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F9230_11485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F9230_11485 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_11485 PF18267 Rubredoxin NAD+ reductase C-terminal domain F9230_11490 PF07690 Major Facilitator Superfamily F9230_11500 PF00005 ABC transporter F9230_11515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F9230_11515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F9230_11520 PF04408 Helicase associated domain (HA2) F9230_11520 PF00271 Helicase conserved C-terminal domain F9230_11520 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold F9230_11520 PF00270 DEAD/DEAH box helicase F9230_11520 PF11898 Domain of unknown function (DUF3418) F9230_11525 PF00578 AhpC/TSA family F9230_11525 PF10417 C-terminal domain of 1-Cys peroxiredoxin F9230_11530 PF16123 Hydroxyacylglutathione hydrolase C-terminus F9230_11530 PF00753 Metallo-beta-lactamase superfamily F9230_11570 PF03793 PASTA domain F9230_11570 PF00069 Protein kinase domain F9230_11585 PF00857 Isochorismatase family F9230_11590 PF00814 Glycoprotease family F9230_11595 PF01165 Ribosomal protein S21 F9230_11600 PF09424 Yqey-like protein F9230_11605 PF01435 Peptidase family M48 F9230_11610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9230_11610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F9230_11625 PF00156 Phosphoribosyl transferase domain F9230_11635 PF01180 Dihydroorotate dehydrogenase F9230_11655 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F9230_11655 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F9230_11660 PF00881 Nitroreductase family F9230_11670 PF00271 Helicase conserved C-terminal domain F9230_11670 PF00270 DEAD/DEAH box helicase F9230_11675 PF00313 'Cold-shock' DNA-binding domain F9230_11685 PF00140 Sigma-70 factor, region 1.2 F9230_11685 PF04545 Sigma-70, region 4 F9230_11685 PF04542 Sigma-70 region 2 F9230_11690 PF04241 Protein of unknown function (DUF423) F9230_11700 PF05690 Thiazole biosynthesis protein ThiG F9230_11715 PF02525 Flavodoxin-like fold F9230_11720 PF00043 Glutathione S-transferase, C-terminal domain F9230_11720 PF02798 Glutathione S-transferase, N-terminal domain F9230_11725 PF01740 STAS domain F9230_11725 PF00916 Sulfate permease family F9230_11735 PF02390 Putative methyltransferase F9230_11760 PF04055 Radical SAM superfamily F9230_11760 PF06968 Biotin and Thiamin Synthesis associated domain F9230_11765 PF00501 AMP-binding enzyme F9230_11765 PF13193 AMP-binding enzyme C-terminal domain F9230_11770 PF17925 Tetracyclin repressor-like, C-terminal domain F9230_11770 PF00440 Bacterial regulatory proteins, tetR family F9230_11775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_11775 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_11775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_11780 PF01039 Carboxyl transferase domain F9230_11785 PF00378 Enoyl-CoA hydratase/isomerase F9230_11790 PF18140 Propionyl-coenzyme A carboxylase BT domain F9230_11790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F9230_11790 PF00289 Biotin carboxylase, N-terminal domain F9230_11790 PF02785 Biotin carboxylase C-terminal domain F9230_11790 PF00364 Biotin-requiring enzyme F9230_11795 PF00682 HMGL-like F9230_11800 PF01144 Coenzyme A transferase F9230_11805 PF01144 Coenzyme A transferase F9230_11810 PF02667 Short chain fatty acid transporter F9230_11825 PF01979 Amidohydrolase family F9230_11830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F9230_11830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F9230_11840 PF10672 S-adenosylmethionine-dependent methyltransferase F9230_11840 PF02926 THUMP domain F9230_11840 PF01170 Putative RNA methylase family UPF0020 F9230_11850 PF00004 ATPase family associated with various cellular activities (AAA) F9230_11850 PF17871 AAA lid domain F9230_11850 PF07724 AAA domain (Cdc48 subfamily) F9230_11850 PF02861 Clp amino terminal domain, pathogenicity island component F9230_11850 PF10431 C-terminal, D2-small domain, of ClpB protein F9230_11855 PF02566 OsmC-like protein F9230_11860 PF00027 Cyclic nucleotide-binding domain F9230_11860 PF13545 Crp-like helix-turn-helix domain F9230_11865 PF00248 Aldo/keto reductase family F9230_11880 PF00709 Adenylosuccinate synthetase F9230_11885 PF13393 Histidyl-tRNA synthetase F9230_11895 PF01037 Lrp/AsnC ligand binding domain F9230_11895 PF13404 AsnC-type helix-turn-helix domain F9230_11900 PF03591 AzlC protein F9230_11915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F9230_11915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F9230_11920 PF01411 tRNA synthetases class II (A) F9230_11920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F9230_11920 PF02272 DHHA1 domain F9230_11925 PF00696 Amino acid kinase family F9230_11925 PF01842 ACT domain F9230_11925 PF13840 ACT domain F9230_11930 PF02599 Global regulator protein family F9230_11935 PF01351 Ribonuclease HII F9230_11950 PF01292 Prokaryotic cytochrome b561 F9230_11960 PF00962 Adenosine/AMP deaminase F9230_11965 PF00860 Permease family F9230_11975 PF00875 DNA photolyase F9230_11975 PF03441 FAD binding domain of DNA photolyase F9230_11985 PF03883 Peroxide stress protein YaaA F9230_12005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F9230_12010 PF00155 Aminotransferase class I and II F9230_12015 PF01842 ACT domain F9230_12015 PF01817 Chorismate mutase type II F9230_12015 PF00800 Prephenate dehydratase F9230_12020 PF01965 DJ-1/PfpI family F9230_12025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_12025 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_12025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9230_12030 PF00375 Sodium:dicarboxylate symporter family F9230_12035 PF02885 Glycosyl transferase family, helical bundle domain F9230_12035 PF00591 Glycosyl transferase family, a/b domain F9230_12045 PF07023 Protein of unknown function (DUF1315) F9230_12050 PF01513 ATP-NAD kinase F9230_12055 PF00912 Transglycosylase F9230_12055 PF14814 Bifunctional transglycosylase second domain F9230_12055 PF00905 Penicillin binding protein transpeptidase domain F9230_12065 PF00293 NUDIX domain F9230_12075 PF08521 Two-component sensor kinase N-terminal F9230_12075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_12075 PF00512 His Kinase A (phospho-acceptor) domain F9230_12080 PF00486 Transcriptional regulatory protein, C terminal F9230_12080 PF00072 Response regulator receiver domain F9230_12090 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F9230_12090 PF00437 Type II/IV secretion system protein F9230_12100 PF18389 TrmO C-terminal domain F9230_12100 PF01980 tRNA-methyltransferase O F9230_12105 PF00970 Oxidoreductase FAD-binding domain F9230_12105 PF00175 Oxidoreductase NAD-binding domain F9230_12155 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) F9230_12155 PF04717 Type VI secretion system, phage-baseplate injector F9230_12155 PF13296 Putative type VI secretion system Rhs element Vgr F9230_12165 PF13411 MerR HTH family regulatory protein F9230_12170 PF01136 Peptidase family U32 F9230_12170 PF16325 Peptidase family U32 C-terminal domain F9230_12175 PF00037 4Fe-4S binding domain F9230_12190 PF05816 Toxic anion resistance protein (TelA) F9230_12200 PF14760 Rnk N-terminus F9230_12200 PF01272 Transcription elongation factor, GreA/GreB, C-term F9230_12205 PF00464 Serine hydroxymethyltransferase F9230_12250 PF07694 5TMR of 5TMR-LYT F9230_12250 PF00990 Diguanylate cyclase, GGDEF domain F9230_12255 PF00999 Sodium/hydrogen exchanger family F9230_12255 PF02254 TrkA-N domain F9230_12260 PF00892 EamA-like transporter family F9230_12265 PF00155 Aminotransferase class I and II F9230_12270 PF00596 Class II Aldolase and Adducin N-terminal domain F9230_12295 PF04030 D-arabinono-1,4-lactone oxidase F9230_12295 PF01565 FAD binding domain F9230_12300 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term F9230_12300 PF12833 Helix-turn-helix domain F9230_12305 PF03459 TOBE domain F9230_12305 PF00005 ABC transporter F9230_12310 PF00528 Binding-protein-dependent transport system inner membrane component F9230_12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_12320 PF03459 TOBE domain F9230_12325 PF02634 FdhD/NarQ family F9230_12330 PF00384 Molybdopterin oxidoreductase F9230_12335 PF04055 Radical SAM superfamily F9230_12335 PF06463 Molybdenum Cofactor Synthesis C F9230_12340 PF00994 Probable molybdopterin binding domain F9230_12340 PF01967 MoaC family F9230_12345 PF00994 Probable molybdopterin binding domain F9230_12345 PF03453 MoeA N-terminal region (domain I and II) F9230_12345 PF03454 MoeA C-terminal region (domain IV) F9230_12360 PF00005 ABC transporter F9230_12365 PF01061 ABC-2 type transporter F9230_12370 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term F9230_12370 PF14489 QueF-like protein F9230_12380 PF13406 Transglycosylase SLT domain F9230_12385 PF05036 Sporulation related domain F9230_12385 PF03330 Lytic transglycolase F9230_12410 PF00889 Elongation factor TS F9230_12415 PF00318 Ribosomal protein S2 F9230_12420 PF00557 Metallopeptidase family M24 F9230_12435 PF02668 Taurine catabolism dioxygenase TauD, TfdA family F9230_12440 PF00266 Aminotransferase class-V F9230_12450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9230_12470 PF00521 DNA gyrase/topoisomerase IV, subunit A F9230_12470 PF03989 DNA gyrase C-terminal domain, beta-propeller F9230_12480 PF01012 Electron transfer flavoprotein domain F9230_12480 PF00766 Electron transfer flavoprotein FAD-binding domain F9230_12485 PF01012 Electron transfer flavoprotein domain F9230_12490 PF01810 LysE type translocator F9230_12495 PF01037 Lrp/AsnC ligand binding domain F9230_12500 PF13302 Acetyltransferase (GNAT) domain F9230_12510 PF02899 Phage integrase, N-terminal SAM-like domain F9230_12510 PF00589 Phage integrase family F9230_12515 PF01678 Diaminopimelate epimerase F9230_12520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F9230_12520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F9230_12530 PF00324 Amino acid permease F9230_12535 PF01235 Sodium:alanine symporter family F9230_12540 PF18073 Rubredoxin metal binding domain F9230_12550 PF17820 PDZ domain F9230_12550 PF13180 PDZ domain F9230_12555 PF01784 NIF3 (NGG1p interacting factor 3) F9230_12560 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F9230_12560 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F9230_12565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F9230_12565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F9230_12605 PF01040 UbiA prenyltransferase family F9230_12610 PF04345 Chorismate lyase F9230_12620 PF03951 Glutamine synthetase, beta-Grasp domain F9230_12620 PF00120 Glutamine synthetase, catalytic domain F9230_12625 PF00117 Glutamine amidotransferase class-I F9230_12630 PF02885 Glycosyl transferase family, helical bundle domain F9230_12630 PF00591 Glycosyl transferase family, a/b domain F9230_12635 PF00218 Indole-3-glycerol phosphate synthase F9230_12640 PF00196 Bacterial regulatory proteins, luxR family F9230_12650 PF00501 AMP-binding enzyme F9230_12650 PF13193 AMP-binding enzyme C-terminal domain F9230_12655 PF00106 short chain dehydrogenase F9230_12665 PF01227 GTP cyclohydrolase I F9230_12675 PF00990 Diguanylate cyclase, GGDEF domain F9230_12690 PF05675 Protein of unknown function (DUF817) F9230_12695 PF01208 Uroporphyrinogen decarboxylase (URO-D) F9230_12710 PF17954 Quercetinase C-terminal cupin domain F9230_12710 PF02678 Pirin F9230_12720 PF00698 Acyl transferase domain F9230_12720 PF14765 Polyketide synthase dehydratase F9230_12720 PF00550 Phosphopantetheine attachment site F9230_12720 PF08659 KR domain F9230_12720 PF02801 Beta-ketoacyl synthase, C-terminal domain F9230_12720 PF00109 Beta-ketoacyl synthase, N-terminal domain F9230_12720 PF16197 Ketoacyl-synthetase C-terminal extension F9230_12720 PF00107 Zinc-binding dehydrogenase F9230_12720 PF08240 Alcohol dehydrogenase GroES-like domain F9230_12725 PF16925 Tetracyclin repressor-like, C-terminal domain F9230_12725 PF00440 Bacterial regulatory proteins, tetR family F9230_12755 PF01272 Transcription elongation factor, GreA/GreB, C-term F9230_12755 PF03449 Transcription elongation factor, N-terminal F9230_12760 PF01464 Transglycosylase SLT domain F9230_12760 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9230_12770 PF01171 PP-loop family F9230_12775 PF01464 Transglycosylase SLT domain F9230_12780 PF01435 Peptidase family M48 F9230_12795 PF03448 MgtE intracellular N domain F9230_12795 PF00571 CBS domain F9230_12795 PF01769 Divalent cation transporter F9230_12800 PF00873 AcrB/AcrD/AcrF family F9230_12805 PF03009 Glycerophosphoryl diester phosphodiesterase family F9230_12810 PF01219 Prokaryotic diacylglycerol kinase F9230_12815 PF00463 Isocitrate lyase family F9230_12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_12820 PF03466 LysR substrate binding domain F9230_12825 PF00571 CBS domain F9230_12825 PF03471 Transporter associated domain F9230_12825 PF01595 Cyclin M transmembrane N-terminal domain F9230_12830 PF03600 Citrate transporter F9230_12850 PF16655 PhoD-like phosphatase, N-terminal domain F9230_12850 PF09423 PhoD-like phosphatase F9230_12870 PF00809 Pterin binding enzyme F9230_12875 PF00004 ATPase family associated with various cellular activities (AAA) F9230_12875 PF17862 AAA+ lid domain F9230_12875 PF06480 FtsH Extracellular F9230_12875 PF01434 Peptidase family M41 F9230_12880 PF01728 FtsJ-like methyltransferase F9230_12885 PF01985 CRS1 / YhbY (CRM) domain F9230_12900 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F9230_12900 PF00117 Glutamine amidotransferase class-I F9230_12905 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F9230_12905 PF02142 MGS-like domain F9230_12905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F9230_12910 PF03449 Transcription elongation factor, N-terminal F9230_12910 PF01272 Transcription elongation factor, GreA/GreB, C-term F9230_12915 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_12930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F9230_12935 PF00999 Sodium/hydrogen exchanger family F9230_12945 PF04228 Putative neutral zinc metallopeptidase F9230_12950 PF05661 Protein of unknown function (DUF808) F9230_12955 PF00579 tRNA synthetases class I (W and Y) F9230_12965 PF15975 Flotillin F9230_12965 PF01145 SPFH domain / Band 7 family F9230_12975 PF02629 CoA binding domain F9230_12975 PF00549 CoA-ligase F9230_12980 PF08442 ATP-grasp domain F9230_12980 PF00549 CoA-ligase F9230_12985 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_12985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F9230_12990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F9230_12990 PF02817 e3 binding domain F9230_12990 PF00364 Biotin-requiring enzyme F9230_12995 PF16078 2-oxoglutarate dehydrogenase N-terminus F9230_12995 PF00676 Dehydrogenase E1 component F9230_12995 PF16870 2-oxoglutarate dehydrogenase C-terminal F9230_12995 PF02779 Transketolase, pyrimidine binding domain F9230_13000 PF13085 2Fe-2S iron-sulfur cluster binding domain F9230_13005 PF00890 FAD binding domain F9230_13005 PF02910 Fumarate reductase flavoprotein C-term F9230_13010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F9230_13015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F9230_13020 PF00285 Citrate synthase, C-terminal domain F9230_13025 PF00743 Flavin-binding monooxygenase-like F9230_13030 PF00106 short chain dehydrogenase F9230_13040 PF13296 Putative type VI secretion system Rhs element Vgr F9230_13040 PF04717 Type VI secretion system, phage-baseplate injector F9230_13040 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) F9230_13045 PF02540 NAD synthase F9230_13045 PF00795 Carbon-nitrogen hydrolase F9230_13070 PF00037 4Fe-4S binding domain F9230_13075 PF01467 Cytidylyltransferase-like F9230_13080 PF01668 SmpB protein F9230_13085 PF03358 NADPH-dependent FMN reductase F9230_13090 PF02578 Multi-copper polyphenol oxidoreductase laccase F9230_13095 PF01479 S4 domain F9230_13095 PF00849 RNA pseudouridylate synthase F9230_13100 PF13525 Outer membrane lipoprotein F9230_13105 PF08275 DNA primase catalytic core, N-terminal domain F9230_13105 PF08278 DNA primase DnaG DnaB-binding F9230_13105 PF10410 DnaB-helicase binding domain of primase F9230_13105 PF01807 CHC2 zinc finger F9230_13110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain F9230_13110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain F9230_13110 PF01488 Shikimate / quinate 5-dehydrogenase F9230_13120 PF03550 Outer membrane lipoprotein LolB F9230_13125 PF08544 GHMP kinases C terminal F9230_13125 PF00288 GHMP kinases N terminal domain F9230_13150 PF14572 Phosphoribosyl synthetase-associated domain F9230_13150 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F9230_13155 PF01386 Ribosomal L25p family F9230_13160 PF01195 Peptidyl-tRNA hydrolase F9230_13165 PF02261 Aspartate decarboxylase F9230_13180 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F9230_13185 PF01810 LysE type translocator F9230_13195 PF17773 UPF0176 acylphosphatase like domain F9230_13195 PF00581 Rhodanese-like domain F9230_13205 PF09335 SNARE associated Golgi protein F9230_13215 PF03466 LysR substrate binding domain F9230_13215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_13220 PF01810 LysE type translocator F9230_13235 PF03979 Sigma-70 factor, region 1.1 F9230_13235 PF00140 Sigma-70 factor, region 1.2 F9230_13235 PF04539 Sigma-70 region 3 F9230_13235 PF04545 Sigma-70, region 4 F9230_13235 PF04546 Sigma-70, non-essential region F9230_13235 PF04542 Sigma-70 region 2 F9230_13240 PF04359 Protein of unknown function (DUF493) F9230_13245 PF03099 Biotin/lipoate A/B protein ligase family F9230_13255 PF00465 Iron-containing alcohol dehydrogenase F9230_13260 PF13520 Amino acid permease F9230_13265 PF03358 NADPH-dependent FMN reductase F9230_13280 PF00588 SpoU rRNA Methylase family F9230_13285 PF10414 Sirohaem synthase dimerisation region F9230_13285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F9230_13285 PF14824 Sirohaem biosynthesis protein central F9230_13290 PF02403 Seryl-tRNA synthetase N-terminal domain F9230_13290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F9230_13300 PF03548 Outer membrane lipoprotein carrier protein LolA F9230_13305 PF13018 Extended Signal Peptide of Type V secretion system F9230_13305 PF03895 YadA-like membrane anchor domain F9230_13305 PF05658 Head domain of trimeric autotransporter adhesin F9230_13305 PF05662 Coiled stalk of trimeric autotransporter adhesin F9230_13320 PF01016 Ribosomal L27 protein F9230_13325 PF00829 Ribosomal prokaryotic L21 protein F9230_13330 PF00348 Polyprenyl synthetase F9230_13340 PF01569 PAP2 superfamily F9230_13345 PF00529 HlyD membrane-fusion protein of T1SS F9230_13345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9230_13350 PF00873 AcrB/AcrD/AcrF family F9230_13355 PF02321 Outer membrane efflux protein F9230_13360 PF01906 Putative heavy-metal-binding F9230_13365 PF01906 Putative heavy-metal-binding F9230_13385 PF00133 tRNA synthetases class I (I, L, M and V) F9230_13385 PF10458 Valyl tRNA synthetase tRNA binding arm F9230_13385 PF08264 Anticodon-binding domain of tRNA F9230_13395 PF08264 Anticodon-binding domain of tRNA F9230_13395 PF00133 tRNA synthetases class I (I, L, M and V) F9230_13395 PF10458 Valyl tRNA synthetase tRNA binding arm F9230_13405 PF04480 Protein of unknown function (DUF559) F9230_13415 PF00072 Response regulator receiver domain F9230_13415 PF00990 Diguanylate cyclase, GGDEF domain F9230_13420 PF00175 Oxidoreductase NAD-binding domain F9230_13420 PF00970 Oxidoreductase FAD-binding domain F9230_13425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_13425 PF03466 LysR substrate binding domain F9230_13430 PF00313 'Cold-shock' DNA-binding domain F9230_13435 PF00313 'Cold-shock' DNA-binding domain F9230_13445 PF00361 Proton-conducting membrane transporter F9230_13450 PF00361 Proton-conducting membrane transporter F9230_13455 PF00361 Proton-conducting membrane transporter F9230_13455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F9230_13460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F9230_13465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 F9230_13470 PF12838 4Fe-4S dicluster domain F9230_13475 PF00146 NADH dehydrogenase F9230_13480 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F9230_13480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F9230_13480 PF00384 Molybdopterin oxidoreductase F9230_13485 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F9230_13485 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region F9230_13485 PF10531 SLBB domain F9230_13495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F9230_13495 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F9230_13500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F9230_13505 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 F9230_13515 PF00512 His Kinase A (phospho-acceptor) domain F9230_13515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_13515 PF00672 HAMP domain F9230_13520 PF00486 Transcriptional regulatory protein, C terminal F9230_13520 PF00072 Response regulator receiver domain F9230_13525 PF00317 Ribonucleotide reductase, all-alpha domain F9230_13525 PF02867 Ribonucleotide reductase, barrel domain F9230_13525 PF03477 ATP cone domain F9230_13530 PF00268 Ribonucleotide reductase, small chain F9230_13580 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) F9230_13580 PF13296 Putative type VI secretion system Rhs element Vgr F9230_13580 PF04717 Type VI secretion system, phage-baseplate injector F9230_13590 PF01425 Amidase F9230_13595 PF00289 Biotin carboxylase, N-terminal domain F9230_13595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F9230_13595 PF02785 Biotin carboxylase C-terminal domain F9230_13600 PF07729 FCD domain F9230_13600 PF00392 Bacterial regulatory proteins, gntR family F9230_13605 PF04972 BON domain F9230_13605 PF01476 LysM domain F9230_13610 PF00550 Phosphopantetheine attachment site F9230_13620 PF00698 Acyl transferase domain F9230_13625 PF01783 Ribosomal L32p protein family F9230_13630 PF02620 Large ribosomal RNA subunit accumulation protein YceD F9230_13635 PF04315 Elongation factor P hydroxylase F9230_13640 PF01300 Telomere recombination F9230_13650 PF02616 Segregation and condensation protein ScpA F9230_13655 PF04079 Segregation and condensation complex subunit ScpB F9230_13660 PF00849 RNA pseudouridylate synthase F9230_13660 PF01479 S4 domain F9230_13665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9230_13665 PF00005 ABC transporter F9230_13670 PF00528 Binding-protein-dependent transport system inner membrane component F9230_13670 PF12911 N-terminal TM domain of oligopeptide transport permease C F9230_13675 PF00528 Binding-protein-dependent transport system inner membrane component F9230_13695 PF07715 TonB-dependent Receptor Plug Domain F9230_13695 PF00593 TonB dependent receptor F9230_13705 PF01618 MotA/TolQ/ExbB proton channel family F9230_13710 PF02472 Biopolymer transport protein ExbD/TolR F9230_13715 PF02472 Biopolymer transport protein ExbD/TolR F9230_13730 PF00155 Aminotransferase class I and II F9230_13735 PF00202 Aminotransferase class-III F9230_13735 PF06968 Biotin and Thiamin Synthesis associated domain F9230_13735 PF04055 Radical SAM superfamily F9230_13740 PF12697 Alpha/beta hydrolase family F9230_13740 PF08241 Methyltransferase domain F9230_13745 PF00578 AhpC/TSA family F9230_13750 PF00210 Ferritin-like domain F9230_13765 PF07715 TonB-dependent Receptor Plug Domain F9230_13765 PF00593 TonB dependent receptor F9230_13770 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family F9230_13775 PF01653 NAD-dependent DNA ligase adenylation domain F9230_13775 PF03120 NAD-dependent DNA ligase OB-fold domain F9230_13775 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F9230_13775 PF12826 Helix-hairpin-helix motif F9230_13775 PF00533 BRCA1 C Terminus (BRCT) domain F9230_13780 PF04354 ZipA, C-terminal FtsZ-binding domain F9230_13785 PF06470 SMC proteins Flexible Hinge Domain F9230_13785 PF02463 RecF/RecN/SMC N terminal domain F9230_13795 PF01925 Sulfite exporter TauE/SafE F9230_13805 PF03309 Type III pantothenate kinase F9230_13815 PF00448 SRP54-type protein, GTPase domain F9230_13815 PF02881 SRP54-type protein, helical bundle domain F9230_13815 PF02978 Signal peptide binding domain F9230_13830 PF12848 ABC transporter F9230_13830 PF00005 ABC transporter F9230_13835 PF01207 Dihydrouridine synthase (Dus) F9230_13855 PF07411 Domain of unknown function (DUF1508) F9230_13865 PF03831 PhnA domain F9230_13865 PF08274 PhnA Zinc-Ribbon F9230_13870 PF04343 Protein of unknown function, DUF488 F9230_13890 PF00849 RNA pseudouridylate synthase F9230_13895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9230_13940 PF00330 Aconitase family (aconitate hydratase) F9230_13940 PF00694 Aconitase C-terminal domain F9230_13975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F9230_13980 PF04966 Carbohydrate-selective porin, OprB family F9230_13985 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F9230_13985 PF06827 Zinc finger found in FPG and IleRS F9230_13985 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F9230_13990 PF09312 SurA N-terminal domain F9230_13990 PF00639 PPIC-type PPIASE domain F9230_14000 PF01741 Large-conductance mechanosensitive channel, MscL F9230_14005 PF00679 Elongation factor G C-terminus F9230_14005 PF03144 Elongation factor Tu domain 2 F9230_14005 PF00009 Elongation factor Tu GTP binding domain F9230_14010 PF00860 Permease family F9230_14015 PF05175 Methyltransferase small domain F9230_14015 PF08468 Methyltransferase small domain N-terminal F9230_14020 PF00324 Amino acid permease F9230_14025 PF00691 OmpA family F9230_14025 PF13505 Outer membrane protein beta-barrel domain F9230_14035 PF02803 Thiolase, C-terminal domain F9230_14035 PF00108 Thiolase, N-terminal domain F9230_14045 PF00893 Small Multidrug Resistance protein F9230_14055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F9230_14055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F9230_14060 PF01011 PQQ enzyme repeat F9230_14065 PF04966 Carbohydrate-selective porin, OprB family F9230_14070 PF02515 CoA-transferase family III F9230_14075 PF02311 AraC-like ligand binding domain F9230_14075 PF12833 Helix-turn-helix domain F9230_14080 PF02803 Thiolase, C-terminal domain F9230_14080 PF00108 Thiolase, N-terminal domain F9230_14085 PF00378 Enoyl-CoA hydratase/isomerase F9230_14085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F9230_14085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F9230_14095 PF13673 Acetyltransferase (GNAT) domain F9230_14105 PF03006 Haemolysin-III related F9230_14110 PF00083 Sugar (and other) transporter F9230_14110 PF07690 Major Facilitator Superfamily F9230_14120 PF00149 Calcineurin-like phosphoesterase F9230_14120 PF10518 TAT (twin-arginine translocation) pathway signal sequence F9230_14125 PF13091 PLD-like domain F9230_14135 PF01926 50S ribosome-binding GTPase F9230_14135 PF13167 GTP-binding GTPase N-terminal F9230_14135 PF16360 GTP-binding GTPase Middle Region F9230_14160 PF00149 Calcineurin-like phosphoesterase F9230_14165 PF00398 Ribosomal RNA adenine dimethylase F9230_14170 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F9230_14175 PF00572 Ribosomal protein L13 F9230_14180 PF00380 Ribosomal protein S9/S16 F9230_14190 PF02798 Glutathione S-transferase, N-terminal domain F9230_14190 PF00043 Glutathione S-transferase, C-terminal domain F9230_14195 PF04386 Stringent starvation protein B F9230_14250 PF04333 MlaA lipoprotein F9230_14255 PF13426 PAS domain F9230_14255 PF07228 Stage II sporulation protein E (SpoIIE) F9230_14265 PF00795 Carbon-nitrogen hydrolase F9230_14270 PF02566 OsmC-like protein F9230_14280 PF00437 Type II/IV secretion system protein F9230_14300 PF00476 DNA polymerase family A F9230_14300 PF01612 3'-5' exonuclease F9230_14300 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F9230_14300 PF01367 5'-3' exonuclease, C-terminal SAM fold F9230_14305 PF02325 YGGT family F9230_14310 PF14748 Pyrroline-5-carboxylate reductase dimerisation F9230_14310 PF03807 NADP oxidoreductase coenzyme F420-dependent F9230_14315 PF11734 TilS substrate C-terminal domain F9230_14315 PF09179 TilS substrate binding domain F9230_14315 PF01171 PP-loop family F9230_14320 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F9230_14325 PF02541 Ppx/GppA phosphatase family F9230_14330 PF00085 Thioredoxin F9230_14335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9230_14335 PF07498 Rho termination factor, N-terminal domain F9230_14335 PF07497 Rho termination factor, RNA-binding domain F9230_14345 PF00216 Bacterial DNA-binding protein F9230_14350 PF01588 Putative tRNA binding domain F9230_14350 PF03483 B3/4 domain F9230_14350 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F9230_14350 PF03484 tRNA synthetase B5 domain F9230_14350 PF03147 Ferredoxin-fold anticodon binding domain F9230_14355 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F9230_14355 PF01409 tRNA synthetases class II core domain (F) F9230_14375 PF00453 Ribosomal protein L20 F9230_14380 PF01632 Ribosomal protein L35 F9230_14395 PF09335 SNARE associated Golgi protein F9230_14405 PF00043 Glutathione S-transferase, C-terminal domain F9230_14405 PF02798 Glutathione S-transferase, N-terminal domain F9230_14410 PF00011 Hsp20/alpha crystallin family F9230_14415 PF05198 Translation initiation factor IF-3, N-terminal domain F9230_14415 PF00707 Translation initiation factor IF-3, C-terminal domain F9230_14420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F9230_14420 PF02824 TGS domain F9230_14420 PF03129 Anticodon binding domain F9230_14420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F9230_14425 PF00501 AMP-binding enzyme F9230_14425 PF13193 AMP-binding enzyme C-terminal domain F9230_14430 PF04751 Protein of unknown function (DUF615) F9230_14435 PF00381 PTS HPr component phosphorylation site F9230_14440 PF03668 P-loop ATPase protein family F9230_14445 PF02569 Pantoate-beta-alanine ligase F9230_14450 PF02548 Ketopantoate hydroxymethyltransferase F9230_14455 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F9230_14460 PF01743 Poly A polymerase head domain F9230_14460 PF12626 Polymerase A arginine-rich C-terminus F9230_14460 PF12627 Probable RNA and SrmB- binding site of polymerase A F9230_14470 PF03819 MazG nucleotide pyrophosphohydrolase domain F9230_14480 PF13291 ACT domain F9230_14480 PF04607 Region found in RelA / SpoT proteins F9230_14480 PF02824 TGS domain F9230_14485 PF05958 tRNA (Uracil-5-)-methyltransferase F9230_14495 PF00291 Pyridoxal-phosphate dependent enzyme F9230_14500 PF00672 HAMP domain F9230_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_14500 PF00512 His Kinase A (phospho-acceptor) domain F9230_14500 PF00072 Response regulator receiver domain F9230_14500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F9230_14500 PF01627 Hpt domain F9230_14505 PF00378 Enoyl-CoA hydratase/isomerase F9230_14510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F9230_14510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F9230_14515 PF01261 Xylose isomerase-like TIM barrel F9230_14530 PF00909 Ammonium Transporter Family F9230_14530 PF00672 HAMP domain F9230_14540 PF02233 NAD(P) transhydrogenase beta subunit F9230_14545 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch F9230_14550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F9230_14550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F9230_14555 PF07690 Major Facilitator Superfamily F9230_14575 PF00884 Sulfatase F9230_14665 PF00589 Phage integrase family F9230_14670 PF01207 Dihydrouridine synthase (Dus) F9230_14675 PF01569 PAP2 superfamily F9230_14680 PF00899 ThiF family F9230_14685 PF00694 Aconitase C-terminal domain F9230_14685 PF00330 Aconitase family (aconitate hydratase) F9230_14690 PF01026 TatD related DNase F9230_14705 PF16658 Class II release factor RF3, C-terminal domain F9230_14705 PF03144 Elongation factor Tu domain 2 F9230_14705 PF00009 Elongation factor Tu GTP binding domain F9230_14715 PF03707 Bacterial signalling protein N terminal repeat F9230_14715 PF00990 Diguanylate cyclase, GGDEF domain F9230_14715 PF00563 EAL domain F9230_14720 PF17804 Tail specific protease N-terminal domain F9230_14720 PF03572 Peptidase family S41 F9230_14720 PF11818 C-terminal domain of tail specific protease (DUF3340) F9230_14720 PF00595 PDZ domain F9230_14725 PF00933 Glycosyl hydrolase family 3 N terminal domain F9230_14740 PF00171 Aldehyde dehydrogenase family F9230_14745 PF00871 Acetokinase family F9230_14750 PF01515 Phosphate acetyl/butaryl transferase F9230_14750 PF07085 DRTGG domain F9230_14775 PF12833 Helix-turn-helix domain F9230_14775 PF02311 AraC-like ligand binding domain F9230_14780 PF05683 Fumarase C-terminus F9230_14780 PF05681 Fumarate hydratase (Fumerase) F9230_14795 PF10431 C-terminal, D2-small domain, of ClpB protein F9230_14795 PF07724 AAA domain (Cdc48 subfamily) F9230_14795 PF06689 ClpX C4-type zinc finger F9230_14800 PF00574 Clp protease F9230_14805 PF05697 Bacterial trigger factor protein (TF) F9230_14805 PF05698 Bacterial trigger factor protein (TF) C-terminus F9230_14805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9230_14810 PF00593 TonB dependent receptor F9230_14810 PF07715 TonB-dependent Receptor Plug Domain F9230_14815 PF00593 TonB dependent receptor F9230_14815 PF07715 TonB-dependent Receptor Plug Domain F9230_14820 PF13640 2OG-Fe(II) oxygenase superfamily F9230_14820 PF18331 PKHD-type hydroxylase C-terminal domain F9230_14825 PF01070 FMN-dependent dehydrogenase F9230_14830 PF00682 HMGL-like F9230_14830 PF08502 LeuA allosteric (dimerisation) domain F9230_14835 PF00561 alpha/beta hydrolase fold F9230_14840 PF07021 Methionine biosynthesis protein MetW F9230_14840 PF00561 alpha/beta hydrolase fold F9230_14850 PF01725 Ham1 family F9230_14860 PF02416 mttA/Hcf106 family F9230_14865 PF02416 mttA/Hcf106 family F9230_14870 PF00902 Sec-independent protein translocase protein (TatC) F9230_14885 PF01790 Prolipoprotein diacylglyceryl transferase F9230_14905 PF00303 Thymidylate synthase F9230_14910 PF00186 Dihydrofolate reductase F9230_14925 PF01625 Peptide methionine sulfoxide reductase F9230_14935 PF01618 MotA/TolQ/ExbB proton channel family F9230_14945 PF01842 ACT domain F9230_14945 PF00551 Formyl transferase F9230_14955 PF00171 Aldehyde dehydrogenase family F9230_14960 PF00830 Ribosomal L28 family F9230_14965 PF00471 Ribosomal protein L33 F9230_14970 PF00999 Sodium/hydrogen exchanger family F9230_14970 PF02254 TrkA-N domain F9230_14995 PF00580 UvrD/REP helicase N-terminal domain F9230_14995 PF13361 UvrD-like helicase C-terminal domain F9230_15000 PF02595 Glycerate kinase family F9230_15020 PF00293 NUDIX domain F9230_15025 PF01131 DNA topoisomerase F9230_15025 PF01751 Toprim domain F9230_15025 PF01396 Topoisomerase DNA binding C4 zinc finger F9230_15025 PF08272 Topoisomerase I zinc-ribbon-like F9230_15040 PF04102 SlyX F9230_15045 PF00005 ABC transporter F9230_15045 PF16326 ABC transporter C-terminal domain F9230_15045 PF12848 ABC transporter F9230_15055 PF03279 Bacterial lipid A biosynthesis acyltransferase F9230_15070 PF02774 Semialdehyde dehydrogenase, dimerisation domain F9230_15070 PF01118 Semialdehyde dehydrogenase, NAD binding domain F9230_15090 PF01416 tRNA pseudouridine synthase F9230_15100 PF01176 Translation initiation factor 1A / IF-1 F9230_15115 PF00180 Isocitrate/isopropylmalate dehydrogenase F9230_15125 PF00694 Aconitase C-terminal domain F9230_15130 PF00330 Aconitase family (aconitate hydratase) F9230_15140 PF03466 LysR substrate binding domain F9230_15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_15160 PF00293 NUDIX domain F9230_15165 PF02896 PEP-utilising enzyme, TIM barrel domain F9230_15165 PF00391 PEP-utilising enzyme, mobile domain F9230_15165 PF05524 PEP-utilising enzyme, N-terminal F9230_15165 PF01590 GAF domain F9230_15175 PF01810 LysE type translocator F9230_15180 PF13404 AsnC-type helix-turn-helix domain F9230_15180 PF01037 Lrp/AsnC ligand binding domain F9230_15190 PF18158 Adaptive response protein AidB N-terminal domain F9230_15190 PF02770 Acyl-CoA dehydrogenase, middle domain F9230_15190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9230_15215 PF00141 Peroxidase F9230_15220 PF12706 Beta-lactamase superfamily domain F9230_15225 PF16916 Dimerisation domain of Zinc Transporter F9230_15225 PF01545 Cation efflux family F9230_15230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_15230 PF03466 LysR substrate binding domain F9230_15245 PF00849 RNA pseudouridylate synthase F9230_15245 PF01479 S4 domain F9230_15255 PF00575 S1 RNA binding domain F9230_15255 PF10150 Ribonuclease E/G family F9230_15255 PF12111 Polyribonucleotide phosphorylase C terminal F9230_15260 PF13193 AMP-binding enzyme C-terminal domain F9230_15260 PF00501 AMP-binding enzyme F9230_15285 PF04024 PspC domain F9230_15300 PF02091 Glycyl-tRNA synthetase alpha subunit F9230_15305 PF02092 Glycyl-tRNA synthetase beta subunit F9230_15305 PF05746 DALR anticodon binding domain F9230_15330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9230_15330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F9230_15345 PF01209 ubiE/COQ5 methyltransferase family F9230_15360 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9230_15360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F9230_15360 PF13247 4Fe-4S dicluster domain F9230_15370 PF03884 DNA gyrase inhibitor YacG F9230_15380 PF00753 Metallo-beta-lactamase superfamily F9230_15385 PF00762 Ferrochelatase F9230_15395 PF01177 Asp/Glu/Hydantoin racemase F9230_15430 PF01206 Sulfurtransferase TusA F9230_15435 PF03471 Transporter associated domain F9230_15435 PF00571 CBS domain F9230_15440 PF00795 Carbon-nitrogen hydrolase F9230_15445 PF01588 Putative tRNA binding domain F9230_15455 PF07963 Prokaryotic N-terminal methylation motif F9230_15455 PF08334 Type II secretion system (T2SS), protein G F9230_15460 PF00482 Type II secretion system (T2SS), protein F F9230_15465 PF00270 DEAD/DEAH box helicase F9230_15465 PF00271 Helicase conserved C-terminal domain F9230_15465 PF17764 3′ DNA-binding domain (3′BD) F9230_15465 PF18074 Primosomal protein N C-terminal domain F9230_15465 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F9230_15470 PF02254 TrkA-N domain F9230_15470 PF00999 Sodium/hydrogen exchanger family F9230_15475 PF01430 Hsp33 protein F9230_15485 PF00226 DnaJ domain F9230_15485 PF01556 DnaJ C terminal domain F9230_15495 PF04325 Protein of unknown function (DUF465) F9230_15500 PF01544 CorA-like Mg2+ transporter protein F9230_15505 PF00013 KH domain F9230_15505 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F9230_15505 PF01138 3' exoribonuclease family, domain 1 F9230_15505 PF03725 3' exoribonuclease family, domain 2 F9230_15505 PF00575 S1 RNA binding domain F9230_15510 PF00312 Ribosomal protein S15 F9230_15515 PF00144 Beta-lactamase F9230_15520 PF13538 UvrD-like helicase C-terminal domain F9230_15525 PF13361 UvrD-like helicase C-terminal domain F9230_15525 PF00580 UvrD/REP helicase N-terminal domain F9230_15525 PF12705 PD-(D/E)XK nuclease superfamily F9230_15530 PF17946 RecC C-terminal domain F9230_15540 PF03976 Polyphosphate kinase 2 (PPK2) F9230_15550 PF01209 ubiE/COQ5 methyltransferase family F9230_15560 PF03109 ABC1 family F9230_15570 PF01494 FAD binding domain F9230_15575 PF01502 Phosphoribosyl-AMP cyclohydrolase F9230_15585 PF02463 RecF/RecN/SMC N terminal domain F9230_15590 PF13244 Domain of unknown function (DUF4040) F9230_15590 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter F9230_15590 PF00361 Proton-conducting membrane transporter F9230_15590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F9230_15595 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F9230_15600 PF00361 Proton-conducting membrane transporter F9230_15605 PF01899 Na+/H+ ion antiporter subunit F9230_15610 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) F9230_15615 PF03334 Na+/H+ antiporter subunit F9230_15620 PF02033 Ribosome-binding factor A F9230_15625 PF00009 Elongation factor Tu GTP binding domain F9230_15625 PF11987 Translation-initiation factor 2 F9230_15625 PF08364 Bacterial translation initiation factor IF-2 associated region F9230_15625 PF04760 Translation initiation factor IF-2, N-terminal region F9230_15630 PF13184 NusA-like KH domain F9230_15630 PF08529 NusA N-terminal domain F9230_15630 PF00575 S1 RNA binding domain F9230_15635 PF02576 RimP N-terminal domain F9230_15635 PF17384 RimP C-terminal SH3 domain F9230_15665 PF03840 Preprotein translocase SecG subunit F9230_15670 PF00121 Triosephosphate isomerase F9230_15675 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F9230_15675 PF00437 Type II/IV secretion system protein F9230_15680 PF00482 Type II secretion system (T2SS), protein F F9230_15685 PF06750 Bacterial Peptidase A24 N-terminal domain F9230_15685 PF01478 Type IV leader peptidase family F9230_15690 PF01121 Dephospho-CoA kinase F9230_15700 PF00588 SpoU rRNA Methylase family F9230_15700 PF08032 RNA 2'-O ribose methyltransferase substrate binding F9230_15705 PF06865 Pyrimidine/purine nucleoside phosphorylase F9230_15710 PF02463 RecF/RecN/SMC N terminal domain F9230_15715 PF02622 Uncharacterized ACR, COG1678 F9230_15720 PF03652 Holliday junction resolvase F9230_15725 PF13533 Biotin-lipoyl like F9230_15735 PF04632 Fusaric acid resistance protein family F9230_15750 PF00664 ABC transporter transmembrane region F9230_15750 PF00005 ABC transporter F9230_15755 PF01066 CDP-alcohol phosphatidyltransferase F9230_15765 PF01541 GIY-YIG catalytic domain F9230_15765 PF02151 UvrB/uvrC motif F9230_15765 PF08459 UvrC Helix-hairpin-helix N-terminal F9230_15785 PF00378 Enoyl-CoA hydratase/isomerase F9230_15785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F9230_15785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F9230_15790 PF00108 Thiolase, N-terminal domain F9230_15790 PF02803 Thiolase, C-terminal domain F9230_15800 PF09313 Domain of unknown function (DUF1971) F9230_15800 PF03848 Tellurite resistance protein TehB F9230_15825 PF01323 DSBA-like thioredoxin domain F9230_15850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_15850 PF00183 Hsp90 protein F9230_15860 PF03922 OmpW family F9230_15865 PF13726 Na+-H+ antiporter family F9230_15865 PF03553 Na+/H+ antiporter family F9230_15890 PF04997 RNA polymerase Rpb1, domain 1 F9230_15890 PF00623 RNA polymerase Rpb1, domain 2 F9230_15890 PF04983 RNA polymerase Rpb1, domain 3 F9230_15890 PF05000 RNA polymerase Rpb1, domain 4 F9230_15890 PF04998 RNA polymerase Rpb1, domain 5 F9230_15895 PF00562 RNA polymerase Rpb2, domain 6 F9230_15895 PF04563 RNA polymerase beta subunit F9230_15895 PF04561 RNA polymerase Rpb2, domain 2 F9230_15895 PF04565 RNA polymerase Rpb2, domain 3 F9230_15895 PF04560 RNA polymerase Rpb2, domain 7 F9230_15895 PF10385 RNA polymerase beta subunit external 1 domain F9230_15900 PF00542 Ribosomal protein L7/L12 C-terminal domain F9230_15900 PF16320 Ribosomal protein L7/L12 dimerisation domain F9230_15905 PF00466 Ribosomal protein L10 F9230_15910 PF00687 Ribosomal protein L1p/L10e family F9230_15915 PF03946 Ribosomal protein L11, N-terminal domain F9230_15915 PF00298 Ribosomal protein L11, RNA binding domain F9230_15920 PF02357 Transcription termination factor nusG F9230_15920 PF00467 KOW motif F9230_15925 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F9230_15935 PF00009 Elongation factor Tu GTP binding domain F9230_15935 PF03143 Elongation factor Tu C-terminal domain F9230_15935 PF03144 Elongation factor Tu domain 2 F9230_15960 PF04715 Anthranilate synthase component I, N terminal region F9230_15960 PF00425 chorismate binding enzyme F9230_15965 PF13419 Haloacid dehalogenase-like hydrolase F9230_15970 PF16697 Inner membrane component of T3SS, cytoplasmic domain F9230_15975 PF00263 Bacterial type II and III secretion system protein F9230_15975 PF03958 Bacterial type II/III secretion system short domain F9230_15980 PF11356 Type II secretion system protein C F9230_15990 PF00816 H-NS histone family F9230_15995 PF03061 Thioesterase superfamily F9230_16015 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F9230_16015 PF03900 Porphobilinogen deaminase, C-terminal domain F9230_16020 PF04397 LytTr DNA-binding domain F9230_16020 PF00072 Response regulator receiver domain F9230_16025 PF07694 5TMR of 5TMR-LYT F9230_16025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_16025 PF06580 Histidine kinase F9230_16030 PF14698 Argininosuccinate lyase C-terminal F9230_16030 PF00206 Lyase F9230_16035 PF04362 Bacterial Fe(2+) trafficking F9230_16040 PF01895 PhoU domain F9230_16045 PF02321 Outer membrane efflux protein F9230_16055 PF01964 Radical SAM ThiC family F9230_16055 PF13667 ThiC-associated domain F9230_16060 PF00293 NUDIX domain F9230_16065 PF00149 Calcineurin-like phosphoesterase F9230_16070 PF01258 Prokaryotic dksA/traR C4-type zinc finger F9230_16075 PF00749 tRNA synthetases class I (E and Q), catalytic domain F9230_16080 PF01098 Cell cycle protein F9230_16085 PF08245 Mur ligase middle domain F9230_16085 PF02875 Mur ligase family, glutamate ligase domain F9230_16095 PF07670 Nucleoside recognition F9230_16095 PF02421 Ferrous iron transport protein B F9230_16095 PF07664 Ferrous iron transport protein B C terminus F9230_16105 PF00589 Phage integrase family F9230_16105 PF02899 Phage integrase, N-terminal SAM-like domain F9230_16110 PF10411 Disulfide bond isomerase protein N-terminus F9230_16110 PF13098 Thioredoxin-like domain F9230_16115 PF01842 ACT domain F9230_16115 PF00742 Homoserine dehydrogenase F9230_16115 PF03447 Homoserine dehydrogenase, NAD binding domain F9230_16120 PF00291 Pyridoxal-phosphate dependent enzyme F9230_16125 PF00768 D-alanyl-D-alanine carboxypeptidase F9230_16130 PF00196 Bacterial regulatory proteins, luxR family F9230_16130 PF00072 Response regulator receiver domain F9230_16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9230_16135 PF00512 His Kinase A (phospho-acceptor) domain F9230_16140 PF02954 Bacterial regulatory protein, Fis family F9230_16140 PF00072 Response regulator receiver domain F9230_16140 PF00158 Sigma-54 interaction domain F9230_16145 PF00595 PDZ domain F9230_16145 PF03572 Peptidase family S41 F9230_16150 PF06415 BPG-independent PGAM N-terminus (iPGM_N) F9230_16150 PF01676 Metalloenzyme superfamily F9230_16155 PF03739 Lipopolysaccharide export system permease LptF/LptG F9230_16160 PF03739 Lipopolysaccharide export system permease LptF/LptG F9230_16165 PF02789 Cytosol aminopeptidase family, N-terminal domain F9230_16165 PF00883 Cytosol aminopeptidase family, catalytic domain F9230_16180 PF09335 SNARE associated Golgi protein F9230_16185 PF00677 Lumazine binding domain F9230_16195 PF01872 RibD C-terminal domain F9230_16195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F9230_16200 PF03477 ATP cone domain F9230_16205 PF00909 Ammonium Transporter Family F9230_16210 PF00543 Nitrogen regulatory protein P-II F9230_16220 PF01078 Magnesium chelatase, subunit ChlI F9230_16220 PF13335 Magnesium chelatase, subunit ChlI C-terminal F9230_16235 PF03573 outer membrane porin, OprD family F9230_16240 PF00719 Inorganic pyrophosphatase F9230_16255 PF13193 AMP-binding enzyme C-terminal domain F9230_16255 PF00501 AMP-binding enzyme F9230_16260 PF03989 DNA gyrase C-terminal domain, beta-propeller F9230_16260 PF00521 DNA gyrase/topoisomerase IV, subunit A F9230_16265 PF07690 Major Facilitator Superfamily F9230_16270 PF03458 UPF0126 domain F9230_16275 PF02810 SEC-C motif F9230_16280 PF03741 Integral membrane protein TerC family F9230_16280 PF03471 Transporter associated domain F9230_16285 PF03641 Possible lysine decarboxylase F9230_16300 PF07690 Major Facilitator Superfamily F9230_16310 PF11798 IMS family HHH motif F9230_16310 PF00817 impB/mucB/samB family F9230_16310 PF11799 impB/mucB/samB family C-terminal domain F9230_16330 PF04055 Radical SAM superfamily F9230_16330 PF11842 Domain of unknown function (DUF3362) F9230_16330 PF08497 Radical SAM N-terminal F9230_16340 PF01546 Peptidase family M20/M25/M40 F9230_16340 PF07687 Peptidase dimerisation domain F9230_16380 PF01327 Polypeptide deformylase F9230_16390 PF17782 DprA winged helix domain F9230_16390 PF02481 DNA recombination-mediator protein A F9230_16395 PF01300 Telomere recombination F9230_16400 PF00892 EamA-like transporter family F9230_16410 PF00255 Glutathione peroxidase F9230_16445 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F9230_16450 PF02874 ATP synthase alpha/beta family, beta-barrel domain F9230_16450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9230_16455 PF00231 ATP synthase F9230_16460 PF02874 ATP synthase alpha/beta family, beta-barrel domain F9230_16460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9230_16460 PF00306 ATP synthase alpha/beta chain, C terminal domain F9230_16465 PF00213 ATP synthase delta (OSCP) subunit F9230_16470 PF00430 ATP synthase B/B' CF(0) F9230_16475 PF00137 ATP synthase subunit C F9230_16480 PF00119 ATP synthase A chain F9230_16500 PF00005 ABC transporter F9230_16505 PF00950 ABC 3 transport family F9230_16510 PF04463 Protein of unknown function (DUF523) F9230_16515 PF01810 LysE type translocator F9230_16520 PF04261 Dyp-type peroxidase family F9230_16530 PF13539 D-alanyl-D-alanine carboxypeptidase F9230_16535 PF04717 Type VI secretion system, phage-baseplate injector F9230_16535 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) F9230_16535 PF13296 Putative type VI secretion system Rhs element Vgr F9230_16540 PF03949 Malic enzyme, NAD binding domain F9230_16540 PF00390 Malic enzyme, N-terminal domain F9230_16555 PF05746 DALR anticodon binding domain F9230_16555 PF03485 Arginyl tRNA synthetase N terminal domain F9230_16555 PF00750 tRNA synthetases class I (R) F9230_16565 PF00561 alpha/beta hydrolase fold F9230_16580 PF05726 Pirin C-terminal cupin domain F9230_16580 PF02678 Pirin F9230_16585 PF04471 Restriction endonuclease F9230_16585 PF14338 Mrr N-terminal domain F9230_16590 PF00117 Glutamine amidotransferase class-I F9230_16590 PF02540 NAD synthase F9230_16590 PF00958 GMP synthase C terminal domain F9230_16600 PF07681 DoxX F9230_16605 PF09335 SNARE associated Golgi protein F9230_16620 PF13614 AAA domain F9230_16630 PF01722 BolA-like protein F9230_16655 PF02801 Beta-ketoacyl synthase, C-terminal domain F9230_16655 PF00109 Beta-ketoacyl synthase, N-terminal domain F9230_16670 PF02801 Beta-ketoacyl synthase, C-terminal domain F9230_16670 PF00109 Beta-ketoacyl synthase, N-terminal domain F9230_16680 PF04820 Tryptophan halogenase F9230_16700 PF00221 Aromatic amino acid lyase F9230_16715 PF07977 FabA-like domain F9230_16725 PF00550 Phosphopantetheine attachment site F9230_16730 PF00550 Phosphopantetheine attachment site F9230_16745 PF03466 LysR substrate binding domain F9230_16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_16750 PF02677 Epoxyqueuosine reductase QueH F9230_16760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F9230_16760 PF00925 GTP cyclohydrolase II F9230_16765 PF00885 6,7-dimethyl-8-ribityllumazine synthase F9230_16770 PF01029 NusB family F9230_16775 PF02769 AIR synthase related protein, C-terminal domain F9230_16775 PF00586 AIR synthase related protein, N-terminal domain F9230_16780 PF04608 Phosphatidylglycerophosphatase A F9230_16785 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_16785 PF14602 Hexapeptide repeat of succinyl-transferase F9230_16785 PF12804 MobA-like NTP transferase domain F9230_16790 PF01380 SIS domain F9230_16795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F9230_16795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F9230_16795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F9230_16795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F9230_16800 PF16363 GDP-mannose 4,6 dehydratase F9230_16805 PF00342 Phosphoglucose isomerase F9230_16810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F9230_16810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F9230_16810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F9230_16815 PF00483 Nucleotidyl transferase F9230_16820 PF02719 Polysaccharide biosynthesis protein F9230_16825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F9230_16830 PF17836 PglD N-terminal domain F9230_16830 PF14602 Hexapeptide repeat of succinyl-transferase F9230_16830 PF00132 Bacterial transferase hexapeptide (six repeats) F9230_16835 PF02397 Bacterial sugar transferase F9230_16850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F9230_16850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F9230_16875 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F9230_16875 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F9230_16875 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F9230_16880 PF02350 UDP-N-acetylglucosamine 2-epimerase F9230_16885 PF18412 Outer-membrane lipoprotein Wza C-terminal domain F9230_16885 PF10531 SLBB domain F9230_16885 PF02563 Polysaccharide biosynthesis/export protein F9230_16890 PF01451 Low molecular weight phosphotyrosine protein phosphatase F9230_16895 PF13614 AAA domain F9230_16895 PF02706 Chain length determinant protein F9230_16895 PF13807 G-rich domain on putative tyrosine kinase F9230_16900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9230_16900 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F9230_16905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9230_16905 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F9230_16910 PF03023 Lipid II flippase MurJ F9230_16915 PF01510 N-acetylmuramoyl-L-alanine amidase F9230_16920 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F9230_16920 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F9230_16925 PF01138 3' exoribonuclease family, domain 1 F9230_16925 PF03725 3' exoribonuclease family, domain 2 F9230_16930 PF00440 Bacterial regulatory proteins, tetR family F9230_16935 PF15864 Protein glycosylation ligase F9230_16935 PF04932 O-Antigen ligase F9230_16935 PF11846 Virulence factor membrane-bound polymerase, C-terminal F9230_16940 PF01323 DSBA-like thioredoxin domain F9230_16950 PF13419 Haloacid dehalogenase-like hydrolase F9230_16955 PF00106 short chain dehydrogenase F9230_16975 PF00696 Amino acid kinase family F9230_16975 PF00583 Acetyltransferase (GNAT) family F9230_16980 PF09084 NMT1/THI5 like F9230_16985 PF09084 NMT1/THI5 like F9230_16990 PF00296 Luciferase-like monooxygenase F9230_16995 PF00528 Binding-protein-dependent transport system inner membrane component F9230_17000 PF00005 ABC transporter F9230_17005 PF08362 YcdC-like protein, C-terminal region F9230_17005 PF00440 Bacterial regulatory proteins, tetR family F9230_17020 PF06574 FAD synthetase F9230_17020 PF01687 Riboflavin kinase F9230_17025 PF08264 Anticodon-binding domain of tRNA F9230_17025 PF00133 tRNA synthetases class I (I, L, M and V) F9230_17025 PF06827 Zinc finger found in FPG and IleRS F9230_17030 PF01252 Signal peptidase (SPase) II F9230_17035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9230_17050 PF07995 Glucose / Sorbosone dehydrogenase F9230_17080 PF00579 tRNA synthetases class I (W and Y) F9230_17085 PF03702 Anhydro-N-acetylmuramic acid kinase F9230_17090 PF13406 Transglycosylase SLT domain F9230_17095 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F9230_17095 PF02222 ATP-grasp domain F9230_17100 PF00731 AIR carboxylase F9230_17110 PF01225 Mur ligase family, catalytic domain F9230_17110 PF02875 Mur ligase family, glutamate ligase domain F9230_17110 PF08245 Mur ligase middle domain F9230_17130 PF03741 Integral membrane protein TerC family F9230_17140 PF03738 Glutathionylspermidine synthase preATP-grasp F9230_17150 PF01979 Amidohydrolase family F9230_17155 PF00156 Phosphoribosyl transferase domain F9230_17165 PF10411 Disulfide bond isomerase protein N-terminus F9230_17165 PF13098 Thioredoxin-like domain F9230_17170 PF16916 Dimerisation domain of Zinc Transporter F9230_17170 PF01545 Cation efflux family F9230_17175 PF02583 Metal-sensitive transcriptional repressor F9230_17180 PF07690 Major Facilitator Superfamily F9230_17185 PF03466 LysR substrate binding domain F9230_17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9230_17190 PF07690 Major Facilitator Superfamily F9230_17195 PF05681 Fumarate hydratase (Fumerase) F9230_17200 PF05683 Fumarase C-terminus F9230_17205 PF00390 Malic enzyme, N-terminal domain F9230_17205 PF03949 Malic enzyme, NAD binding domain F9230_17210 PF01926 50S ribosome-binding GTPase F9230_17210 PF12631 MnmE helical domain F9230_17210 PF10396 GTP-binding protein TrmE N-terminus F9230_17215 PF02096 60Kd inner membrane protein F9230_17215 PF14849 YidC periplasmic domain F9230_17220 PF01809 Putative membrane protein insertion efficiency factor F9230_17225 PF00825 Ribonuclease P F9230_17230 PF00468 Ribosomal protein L34 F9230_17240 PF01051 Initiator Replication protein