locus-tag class description LXM48_00010 PF08267 Cobalamin-independent synthase, N-terminal domain LXM48_00010 PF01717 Cobalamin-independent synthase, Catalytic domain LXM48_00015 PF01613 Flavin reductase like domain LXM48_00020 PF10417 C-terminal domain of 1-Cys peroxiredoxin LXM48_00020 PF00578 AhpC/TSA family LXM48_00035 PF05726 Pirin C-terminal cupin domain LXM48_00035 PF02678 Pirin LXM48_00040 PF01593 Flavin containing amine oxidoreductase LXM48_00085 PF13936 Helix-turn-helix domain LXM48_00085 PF00665 Integrase core domain LXM48_00195 PF18273 Type III R-M EcoP15I C-terminal domain LXM48_00195 PF01555 DNA methylase LXM48_00200 PF08774 VRR-NUC domain LXM48_00200 PF04851 Type III restriction enzyme, res subunit LXM48_00215 PF00589 Phage integrase family LXM48_00215 PF13356 Arm DNA-binding domain LXM48_00225 PF02705 K+ potassium transporter LXM48_00245 PF00230 Major intrinsic protein LXM48_00265 PF00977 Histidine biosynthesis protein LXM48_00270 PF01636 Phosphotransferase enzyme family LXM48_00275 PF00313 'Cold-shock' DNA-binding domain LXM48_00290 PF00324 Amino acid permease LXM48_00295 PF01266 FAD dependent oxidoreductase LXM48_00305 PF01381 Helix-turn-helix LXM48_00310 PF00977 Histidine biosynthesis protein LXM48_00325 PF00117 Glutamine amidotransferase class-I LXM48_00330 PF00475 Imidazoleglycerol-phosphate dehydratase LXM48_00355 PF00583 Acetyltransferase (GNAT) family LXM48_00360 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LXM48_00360 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LXM48_00365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_00365 PF00512 His Kinase A (phospho-acceptor) domain LXM48_00365 PF00672 HAMP domain LXM48_00370 PF00486 Transcriptional regulatory protein, C terminal LXM48_00370 PF00072 Response regulator receiver domain LXM48_00375 PF00575 S1 RNA binding domain LXM48_00375 PF09371 Tex-like protein N-terminal domain LXM48_00375 PF16921 Tex protein YqgF-like domain LXM48_00375 PF17674 HHH domain LXM48_00390 PF00106 short chain dehydrogenase LXM48_00395 PF01053 Cys/Met metabolism PLP-dependent enzyme LXM48_00400 PF00005 ABC transporter LXM48_00400 PF12848 ABC transporter LXM48_00420 PF00749 tRNA synthetases class I (E and Q), catalytic domain LXM48_00440 PF01795 MraW methylase family LXM48_00450 PF00905 Penicillin binding protein transpeptidase domain LXM48_00450 PF03717 Penicillin-binding Protein dimerisation domain LXM48_00455 PF01225 Mur ligase family, catalytic domain LXM48_00455 PF02875 Mur ligase family, glutamate ligase domain LXM48_00455 PF08245 Mur ligase middle domain LXM48_00460 PF01225 Mur ligase family, catalytic domain LXM48_00460 PF02875 Mur ligase family, glutamate ligase domain LXM48_00460 PF08245 Mur ligase middle domain LXM48_00465 PF00953 Glycosyl transferase family 4 LXM48_00470 PF13847 Methyltransferase domain LXM48_00475 PF00912 Transglycosylase LXM48_00475 PF00905 Penicillin binding protein transpeptidase domain LXM48_00475 PF17092 Penicillin-binding protein OB-like domain LXM48_00480 PF11104 Type IV pilus assembly protein PilM; LXM48_00485 PF05137 Fimbrial assembly protein (PilN) LXM48_00490 PF04350 Pilus assembly protein, PilO LXM48_00500 PF11741 AMIN domain LXM48_00500 PF00263 Bacterial type II and III secretion system protein LXM48_00500 PF03958 Bacterial type II/III secretion system short domain LXM48_00500 PF07660 Secretin and TonB N terminus short domain LXM48_00505 PF01202 Shikimate kinase LXM48_00510 PF01761 3-dehydroquinate synthase LXM48_00520 PF01493 GXGXG motif LXM48_00520 PF01645 Conserved region in glutamate synthase LXM48_00520 PF04898 Glutamate synthase central domain LXM48_00520 PF00310 Glutamine amidotransferases class-II LXM48_00525 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_00525 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LXM48_00535 PF04011 LemA family LXM48_00540 PF04536 TPM domain LXM48_00550 PF00114 Pilin (bacterial filament) LXM48_00550 PF07963 Prokaryotic N-terminal methylation motif LXM48_00560 PF00210 Ferritin-like domain LXM48_00565 PF04324 BFD-like [2Fe-2S] binding domain LXM48_00570 PF01042 Endoribonuclease L-PSP LXM48_00575 PF13291 ACT domain LXM48_00575 PF02824 TGS domain LXM48_00575 PF04607 Region found in RelA / SpoT proteins LXM48_00580 PF01192 RNA polymerase Rpb6 LXM48_00585 PF00625 Guanylate kinase LXM48_00590 PF02401 LytB protein LXM48_00595 PF00114 Pilin (bacterial filament) LXM48_00595 PF07963 Prokaryotic N-terminal methylation motif LXM48_00630 PF00886 Ribosomal protein S16 LXM48_00635 PF01782 RimM N-terminal domain LXM48_00635 PF05239 PRC-barrel domain LXM48_00640 PF01746 tRNA (Guanine-1)-methyltransferase LXM48_00645 PF01245 Ribosomal protein L19 LXM48_00650 PF00561 alpha/beta hydrolase fold LXM48_00655 PF00561 alpha/beta hydrolase fold LXM48_00660 PF03280 Proteobacterial lipase chaperone protein LXM48_00665 PF09157 Pseudouridine synthase II TruB, C-terminal LXM48_00665 PF01509 TruB family pseudouridylate synthase (N terminal domain) LXM48_00665 PF16198 tRNA pseudouridylate synthase B C-terminal domain LXM48_00670 PF01925 Sulfite exporter TauE/SafE LXM48_00680 PF00892 EamA-like transporter family LXM48_00685 PF00892 EamA-like transporter family LXM48_00690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LXM48_00690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LXM48_00695 PF01565 FAD binding domain LXM48_00695 PF02913 FAD linked oxidases, C-terminal domain LXM48_00710 PF05726 Pirin C-terminal cupin domain LXM48_00710 PF02678 Pirin LXM48_00715 PF07690 Major Facilitator Superfamily LXM48_00720 PF12823 Domain of unknown function (DUF3817) LXM48_00725 PF12805 FUSC-like inner membrane protein yccS LXM48_00730 PF00080 Copper/zinc superoxide dismutase (SODC) LXM48_00735 PF01594 AI-2E family transporter LXM48_00740 PF13614 AAA domain LXM48_00750 PF01209 ubiE/COQ5 methyltransferase family LXM48_00765 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LXM48_00770 PF01197 Ribosomal protein L31 LXM48_00775 PF03109 ABC1 family LXM48_00785 PF01554 MatE LXM48_00795 PF04055 Radical SAM superfamily LXM48_00795 PF06969 HemN C-terminal domain LXM48_00805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_00805 PF02770 Acyl-CoA dehydrogenase, middle domain LXM48_00805 PF12806 Acetyl-CoA dehydrogenase C-terminal like LXM48_00805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LXM48_00815 PF01488 Shikimate / quinate 5-dehydrogenase LXM48_00815 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LXM48_00815 PF08501 Shikimate dehydrogenase substrate binding domain LXM48_00825 PF01218 Coproporphyrinogen III oxidase LXM48_00830 PF06969 HemN C-terminal domain LXM48_00830 PF04055 Radical SAM superfamily LXM48_00835 PF00925 GTP cyclohydrolase II LXM48_00840 PF02779 Transketolase, pyrimidine binding domain LXM48_00840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LXM48_00840 PF02780 Transketolase, C-terminal domain LXM48_00845 PF00459 Inositol monophosphatase family LXM48_00850 PF00270 DEAD/DEAH box helicase LXM48_00850 PF00271 Helicase conserved C-terminal domain LXM48_00855 PF00005 ABC transporter LXM48_00860 PF02405 Permease MlaE LXM48_00865 PF02470 MlaD protein LXM48_00870 PF05494 MlaC protein LXM48_00880 PF01544 CorA-like Mg2+ transporter protein LXM48_00885 PF03641 Possible lysine decarboxylase LXM48_00890 PF00293 NUDIX domain LXM48_00895 PF00156 Phosphoribosyl transferase domain LXM48_00900 PF00270 DEAD/DEAH box helicase LXM48_00900 PF17191 RecG wedge domain LXM48_00900 PF00271 Helicase conserved C-terminal domain LXM48_00920 PF01553 Acyltransferase LXM48_00930 PF00375 Sodium:dicarboxylate symporter family LXM48_00940 PF01926 50S ribosome-binding GTPase LXM48_00945 PF02082 Transcriptional regulator LXM48_00950 PF00970 Oxidoreductase FAD-binding domain LXM48_00950 PF00042 Globin LXM48_00950 PF00175 Oxidoreductase NAD-binding domain LXM48_00955 PF05872 Bacterial protein of unknown function (DUF853) LXM48_00960 PF01053 Cys/Met metabolism PLP-dependent enzyme LXM48_00965 PF00117 Glutamine amidotransferase class-I LXM48_00970 PF00338 Ribosomal protein S10p/S20e LXM48_00975 PF00297 Ribosomal protein L3 LXM48_00980 PF00573 Ribosomal protein L4/L1 family LXM48_00985 PF00276 Ribosomal protein L23 LXM48_00990 PF03947 Ribosomal Proteins L2, C-terminal domain LXM48_00990 PF00181 Ribosomal Proteins L2, RNA binding domain LXM48_00995 PF00203 Ribosomal protein S19 LXM48_01000 PF00237 Ribosomal protein L22p/L17e LXM48_01010 PF00252 Ribosomal protein L16p/L10e LXM48_01015 PF00831 Ribosomal L29 protein LXM48_01020 PF00366 Ribosomal protein S17 LXM48_01025 PF00238 Ribosomal protein L14p/L23e LXM48_01030 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LXM48_01030 PF00467 KOW motif LXM48_01035 PF00673 ribosomal L5P family C-terminus LXM48_01035 PF00281 Ribosomal protein L5 LXM48_01040 PF00253 Ribosomal protein S14p/S29e LXM48_01045 PF00410 Ribosomal protein S8 LXM48_01050 PF00347 Ribosomal protein L6 LXM48_01055 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LXM48_01060 PF00333 Ribosomal protein S5, N-terminal domain LXM48_01060 PF03719 Ribosomal protein S5, C-terminal domain LXM48_01065 PF00327 Ribosomal protein L30p/L7e LXM48_01070 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LXM48_01075 PF00344 SecY translocase LXM48_01080 PF00444 Ribosomal protein L36 LXM48_01085 PF00416 Ribosomal protein S13/S18 LXM48_01090 PF00411 Ribosomal protein S11 LXM48_01095 PF00163 Ribosomal protein S4/S9 N-terminal domain LXM48_01095 PF01479 S4 domain LXM48_01100 PF01000 RNA polymerase Rpb3/RpoA insert domain LXM48_01100 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LXM48_01100 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LXM48_01105 PF01196 Ribosomal protein L17 LXM48_01110 PF00743 Flavin-binding monooxygenase-like LXM48_01120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LXM48_01120 PF02770 Acyl-CoA dehydrogenase, middle domain LXM48_01120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_01125 PF03937 Flavinator of succinate dehydrogenase LXM48_01155 PF09526 Probable metal-binding protein (DUF2387) LXM48_01160 PF01432 Peptidase family M3 LXM48_01165 PF04294 VanW like protein LXM48_01170 PF08461 Ribonuclease R winged-helix domain LXM48_01170 PF08206 Ribonuclease B OB domain LXM48_01170 PF00773 RNB domain LXM48_01170 PF00575 S1 RNA binding domain LXM48_01170 PF17876 Cold shock domain LXM48_01200 PF01557 Fumarylacetoacetate (FAA) hydrolase family LXM48_01215 PF03631 Virulence factor BrkB LXM48_01220 PF03358 NADPH-dependent FMN reductase LXM48_01230 PF00990 Diguanylate cyclase, GGDEF domain LXM48_01260 PF02130 Uncharacterized protein family UPF0054 LXM48_01265 PF02562 PhoH-like protein LXM48_01270 PF01938 TRAM domain LXM48_01270 PF00919 Uncharacterized protein family UPF0004 LXM48_01270 PF04055 Radical SAM superfamily LXM48_01275 PF10145 Phage-related minor tail protein LXM48_01275 PF01464 Transglycosylase SLT domain LXM48_01275 PF01551 Peptidase family M23 LXM48_01285 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LXM48_01285 PF00056 lactate/malate dehydrogenase, NAD binding domain LXM48_01310 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LXM48_01315 PF01066 CDP-alcohol phosphatidyltransferase LXM48_01350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LXM48_01350 PF00403 Heavy-metal-associated domain LXM48_01350 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_01360 PF00753 Metallo-beta-lactamase superfamily LXM48_01360 PF04273 Putative phosphatase (DUF442) LXM48_01370 PF00085 Thioredoxin LXM48_01375 PF03061 Thioesterase superfamily LXM48_01390 PF04461 Protein of unknown function (DUF520) LXM48_01400 PF01266 FAD dependent oxidoreductase LXM48_01400 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LXM48_01410 PF03795 YCII-related domain LXM48_01415 PF04279 Intracellular septation protein A LXM48_01420 PF02811 PHP domain LXM48_01425 PF01062 Bestrophin, RFP-TM, chloride channel LXM48_01430 PF04002 RadC-like JAB domain LXM48_01435 PF02441 Flavoprotein LXM48_01435 PF04127 DNA / pantothenate metabolism flavoprotein LXM48_01445 PF02556 Preprotein translocase subunit SecB LXM48_01450 PF00462 Glutaredoxin LXM48_01460 PF03193 RsgA GTPase LXM48_01465 PF00929 Exonuclease LXM48_01480 PF02321 Outer membrane efflux protein LXM48_01485 PF12704 MacB-like periplasmic core domain LXM48_01485 PF00005 ABC transporter LXM48_01485 PF02687 FtsX-like permease family LXM48_01490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LXM48_01505 PF08264 Anticodon-binding domain of tRNA LXM48_01505 PF00133 tRNA synthetases class I (I, L, M and V) LXM48_01505 PF13603 Leucyl-tRNA synthetase, Domain 2 LXM48_01505 PF09334 tRNA synthetases class I (M) LXM48_01515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LXM48_01515 PF00205 Thiamine pyrophosphate enzyme, central domain LXM48_01515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LXM48_01520 PF10369 Small subunit of acetolactate synthase LXM48_01525 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LXM48_01525 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LXM48_01550 PF00534 Glycosyl transferases group 1 LXM48_01550 PF13439 Glycosyltransferase Family 4 LXM48_01555 PF01569 PAP2 superfamily LXM48_01560 PF04384 Iron-sulphur cluster assembly LXM48_01565 PF00334 Nucleoside diphosphate kinase LXM48_01570 PF04055 Radical SAM superfamily LXM48_01580 PF13464 Domain of unknown function (DUF4115) LXM48_01585 PF04551 GcpE protein LXM48_01590 PF13393 Histidyl-tRNA synthetase LXM48_01590 PF03129 Anticodon binding domain LXM48_01600 PF13360 PQQ-like domain LXM48_01600 PF01011 PQQ enzyme repeat LXM48_01605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LXM48_01605 PF01926 50S ribosome-binding GTPase LXM48_01610 PF01648 4'-phosphopantetheinyl transferase superfamily LXM48_01615 PF02355 Protein export membrane protein LXM48_01615 PF07549 SecD/SecF GG Motif LXM48_01620 PF13721 SecD export protein N-terminal TM region LXM48_01620 PF07549 SecD/SecF GG Motif LXM48_01620 PF02355 Protein export membrane protein LXM48_01625 PF02699 Preprotein translocase subunit LXM48_01630 PF01702 Queuine tRNA-ribosyltransferase LXM48_01635 PF04011 LemA family LXM48_01645 PF02547 Queuosine biosynthesis protein LXM48_01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_01655 PF00512 His Kinase A (phospho-acceptor) domain LXM48_01655 PF00672 HAMP domain LXM48_01655 PF13426 PAS domain LXM48_01660 PF08335 GlnD PII-uridylyltransferase LXM48_01660 PF03710 Glutamate-ammonia ligase adenylyltransferase LXM48_01665 PF01063 Amino-transferase class IV LXM48_01670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LXM48_01670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LXM48_01680 PF17101 Stealth protein CR1, conserved region 1 LXM48_01680 PF17102 Stealth protein CR3, conserved region 3 LXM48_01680 PF11380 Stealth protein CR2, conserved region 2 LXM48_01725 PF01336 OB-fold nucleic acid binding domain LXM48_01725 PF00152 tRNA synthetases class II (D, K and N) LXM48_01725 PF02938 GAD domain LXM48_01735 PF00593 TonB dependent receptor LXM48_01735 PF07715 TonB-dependent Receptor Plug Domain LXM48_01755 PF06146 Phosphate-starvation-inducible E LXM48_01760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LXM48_01760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_01760 PF02770 Acyl-CoA dehydrogenase, middle domain LXM48_01760 PF12806 Acetyl-CoA dehydrogenase C-terminal like LXM48_01765 PF12806 Acetyl-CoA dehydrogenase C-terminal like LXM48_01765 PF02770 Acyl-CoA dehydrogenase, middle domain LXM48_01765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LXM48_01765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_01775 PF00672 HAMP domain LXM48_01775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_01775 PF00512 His Kinase A (phospho-acceptor) domain LXM48_01780 PF00072 Response regulator receiver domain LXM48_01780 PF00486 Transcriptional regulatory protein, C terminal LXM48_01785 PF00324 Amino acid permease LXM48_01790 PF04237 YjbR LXM48_01795 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LXM48_01815 PF01923 Cobalamin adenosyltransferase LXM48_01820 PF07715 TonB-dependent Receptor Plug Domain LXM48_01820 PF00593 TonB dependent receptor LXM48_01825 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LXM48_01830 PF00291 Pyridoxal-phosphate dependent enzyme LXM48_01850 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LXM48_01850 PF12833 Helix-turn-helix domain LXM48_01860 PF00290 Tryptophan synthase alpha chain LXM48_01865 PF01039 Carboxyl transferase domain LXM48_01870 PF02875 Mur ligase family, glutamate ligase domain LXM48_01870 PF08245 Mur ligase middle domain LXM48_01885 PF00753 Metallo-beta-lactamase superfamily LXM48_01890 PF10417 C-terminal domain of 1-Cys peroxiredoxin LXM48_01890 PF00578 AhpC/TSA family LXM48_01900 PF02810 SEC-C motif LXM48_01900 PF07517 SecA DEAD-like domain LXM48_01900 PF01043 SecA preprotein cross-linking domain LXM48_01900 PF07516 SecA Wing and Scaffold domain LXM48_01910 PF01960 ArgJ family LXM48_01915 PF02445 Quinolinate synthetase A protein LXM48_01945 PF17152 Periplasmic sensor domain LXM48_01945 PF00990 Diguanylate cyclase, GGDEF domain LXM48_01950 PF13689 YfiR/HmsC-like LXM48_01990 PF04386 Stringent starvation protein B LXM48_01995 PF00043 Glutathione S-transferase, C-terminal domain LXM48_01995 PF02798 Glutathione S-transferase, N-terminal domain LXM48_02005 PF00380 Ribosomal protein S9/S16 LXM48_02010 PF00572 Ribosomal protein L13 LXM48_02015 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LXM48_02020 PF00398 Ribosomal RNA adenine dimethylase LXM48_02025 PF00149 Calcineurin-like phosphoesterase LXM48_02050 PF16360 GTP-binding GTPase Middle Region LXM48_02050 PF01926 50S ribosome-binding GTPase LXM48_02050 PF13167 GTP-binding GTPase N-terminal LXM48_02060 PF13091 PLD-like domain LXM48_02065 PF00149 Calcineurin-like phosphoesterase LXM48_02065 PF10518 TAT (twin-arginine translocation) pathway signal sequence LXM48_02075 PF07690 Major Facilitator Superfamily LXM48_02075 PF00083 Sugar (and other) transporter LXM48_02080 PF03006 Haemolysin-III related LXM48_02090 PF13673 Acetyltransferase (GNAT) domain LXM48_02100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LXM48_02100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LXM48_02100 PF00378 Enoyl-CoA hydratase/isomerase LXM48_02105 PF02803 Thiolase, C-terminal domain LXM48_02105 PF00108 Thiolase, N-terminal domain LXM48_02110 PF02311 AraC-like ligand binding domain LXM48_02110 PF12833 Helix-turn-helix domain LXM48_02115 PF02515 CoA-transferase family III LXM48_02120 PF04966 Carbohydrate-selective porin, OprB family LXM48_02125 PF01011 PQQ enzyme repeat LXM48_02130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LXM48_02130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LXM48_02140 PF00893 Small Multidrug Resistance protein LXM48_02150 PF02803 Thiolase, C-terminal domain LXM48_02150 PF00108 Thiolase, N-terminal domain LXM48_02165 PF13505 Outer membrane protein beta-barrel domain LXM48_02165 PF00691 OmpA family LXM48_02170 PF00324 Amino acid permease LXM48_02175 PF08468 Methyltransferase small domain N-terminal LXM48_02175 PF05175 Methyltransferase small domain LXM48_02180 PF00860 Permease family LXM48_02185 PF00679 Elongation factor G C-terminus LXM48_02185 PF03144 Elongation factor Tu domain 2 LXM48_02185 PF00009 Elongation factor Tu GTP binding domain LXM48_02190 PF01741 Large-conductance mechanosensitive channel, MscL LXM48_02200 PF09312 SurA N-terminal domain LXM48_02200 PF00639 PPIC-type PPIASE domain LXM48_02205 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LXM48_02205 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LXM48_02205 PF06827 Zinc finger found in FPG and IleRS LXM48_02210 PF04966 Carbohydrate-selective porin, OprB family LXM48_02215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LXM48_02250 PF00330 Aconitase family (aconitate hydratase) LXM48_02250 PF00694 Aconitase C-terminal domain LXM48_02300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LXM48_02305 PF00849 RNA pseudouridylate synthase LXM48_02325 PF04343 Protein of unknown function, DUF488 LXM48_02330 PF03831 PhnA domain LXM48_02330 PF08274 PhnA Zinc-Ribbon LXM48_02340 PF07411 Domain of unknown function (DUF1508) LXM48_02360 PF01207 Dihydrouridine synthase (Dus) LXM48_02375 PF02978 Signal peptide binding domain LXM48_02375 PF02881 SRP54-type protein, helical bundle domain LXM48_02375 PF00448 SRP54-type protein, GTPase domain LXM48_02385 PF03309 Type III pantothenate kinase LXM48_02395 PF01925 Sulfite exporter TauE/SafE LXM48_02405 PF06470 SMC proteins Flexible Hinge Domain LXM48_02405 PF02463 RecF/RecN/SMC N terminal domain LXM48_02410 PF04354 ZipA, C-terminal FtsZ-binding domain LXM48_02415 PF00533 BRCA1 C Terminus (BRCT) domain LXM48_02415 PF01653 NAD-dependent DNA ligase adenylation domain LXM48_02415 PF03120 NAD-dependent DNA ligase OB-fold domain LXM48_02415 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LXM48_02415 PF12826 Helix-hairpin-helix motif LXM48_02420 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LXM48_02425 PF07715 TonB-dependent Receptor Plug Domain LXM48_02425 PF00593 TonB dependent receptor LXM48_02445 PF00210 Ferritin-like domain LXM48_02450 PF00578 AhpC/TSA family LXM48_02455 PF12697 Alpha/beta hydrolase family LXM48_02455 PF08241 Methyltransferase domain LXM48_02460 PF00202 Aminotransferase class-III LXM48_02460 PF06968 Biotin and Thiamin Synthesis associated domain LXM48_02460 PF04055 Radical SAM superfamily LXM48_02465 PF00155 Aminotransferase class I and II LXM48_02480 PF02472 Biopolymer transport protein ExbD/TolR LXM48_02485 PF02472 Biopolymer transport protein ExbD/TolR LXM48_02490 PF01618 MotA/TolQ/ExbB proton channel family LXM48_02500 PF07715 TonB-dependent Receptor Plug Domain LXM48_02500 PF00593 TonB dependent receptor LXM48_02520 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_02525 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_02525 PF12911 N-terminal TM domain of oligopeptide transport permease C LXM48_02530 PF00005 ABC transporter LXM48_02530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LXM48_02540 PF04079 Segregation and condensation complex subunit ScpB LXM48_02545 PF02616 Segregation and condensation protein ScpA LXM48_02555 PF01300 Telomere recombination LXM48_02560 PF04315 Elongation factor P hydroxylase LXM48_02565 PF02620 Large ribosomal RNA subunit accumulation protein YceD LXM48_02570 PF01783 Ribosomal L32p protein family LXM48_02575 PF00698 Acyl transferase domain LXM48_02585 PF00550 Phosphopantetheine attachment site LXM48_02590 PF01476 LysM domain LXM48_02590 PF04972 BON domain LXM48_02595 PF00392 Bacterial regulatory proteins, gntR family LXM48_02595 PF07729 FCD domain LXM48_02600 PF00289 Biotin carboxylase, N-terminal domain LXM48_02600 PF00364 Biotin-requiring enzyme LXM48_02600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LXM48_02600 PF02785 Biotin carboxylase C-terminal domain LXM48_02605 PF01425 Amidase LXM48_02620 PF13359 DDE superfamily endonuclease LXM48_02620 PF13613 Helix-turn-helix of DDE superfamily endonuclease LXM48_02625 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LXM48_02625 PF04717 Type VI secretion system, phage-baseplate injector LXM48_02625 PF13296 Putative type VI secretion system Rhs element Vgr LXM48_02630 PF03527 RHS protein LXM48_02630 PF05593 RHS Repeat LXM48_02655 PF00268 Ribonucleotide reductase, small chain LXM48_02665 PF03477 ATP cone domain LXM48_02665 PF02867 Ribonucleotide reductase, barrel domain LXM48_02665 PF00317 Ribonucleotide reductase, all-alpha domain LXM48_02670 PF00072 Response regulator receiver domain LXM48_02670 PF00486 Transcriptional regulatory protein, C terminal LXM48_02675 PF00512 His Kinase A (phospho-acceptor) domain LXM48_02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_02675 PF00672 HAMP domain LXM48_02685 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LXM48_02690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LXM48_02695 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LXM48_02695 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LXM48_02705 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LXM48_02705 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LXM48_02705 PF10531 SLBB domain LXM48_02710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LXM48_02710 PF00384 Molybdopterin oxidoreductase LXM48_02710 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LXM48_02715 PF00146 NADH dehydrogenase LXM48_02720 PF12838 4Fe-4S dicluster domain LXM48_02725 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LXM48_02730 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LXM48_02735 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LXM48_02735 PF00361 Proton-conducting membrane transporter LXM48_02740 PF00361 Proton-conducting membrane transporter LXM48_02745 PF00361 Proton-conducting membrane transporter LXM48_02755 PF00313 'Cold-shock' DNA-binding domain LXM48_02765 PF03466 LysR substrate binding domain LXM48_02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_02770 PF00970 Oxidoreductase FAD-binding domain LXM48_02770 PF00175 Oxidoreductase NAD-binding domain LXM48_02810 PF13737 Transposase DDE domain LXM48_02815 PF00133 tRNA synthetases class I (I, L, M and V) LXM48_02815 PF10458 Valyl tRNA synthetase tRNA binding arm LXM48_02815 PF08264 Anticodon-binding domain of tRNA LXM48_02840 PF01906 Putative heavy-metal-binding LXM48_02845 PF02321 Outer membrane efflux protein LXM48_02850 PF00873 AcrB/AcrD/AcrF family LXM48_02855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LXM48_02855 PF00529 HlyD membrane-fusion protein of T1SS LXM48_02860 PF01569 PAP2 superfamily LXM48_02870 PF00348 Polyprenyl synthetase LXM48_02875 PF00829 Ribosomal prokaryotic L21 protein LXM48_02880 PF01016 Ribosomal L27 protein LXM48_02890 PF13018 Extended Signal Peptide of Type V secretion system LXM48_02890 PF03895 YadA-like membrane anchor domain LXM48_02890 PF05658 Head domain of trimeric autotransporter adhesin LXM48_02890 PF05662 Coiled stalk of trimeric autotransporter adhesin LXM48_02895 PF03548 Outer membrane lipoprotein carrier protein LolA LXM48_02905 PF02403 Seryl-tRNA synthetase N-terminal domain LXM48_02905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LXM48_02910 PF10414 Sirohaem synthase dimerisation region LXM48_02910 PF14824 Sirohaem biosynthesis protein central LXM48_02910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LXM48_02915 PF00588 SpoU rRNA Methylase family LXM48_02930 PF03358 NADPH-dependent FMN reductase LXM48_02935 PF13520 Amino acid permease LXM48_02940 PF00465 Iron-containing alcohol dehydrogenase LXM48_02950 PF03099 Biotin/lipoate A/B protein ligase family LXM48_02955 PF04359 Protein of unknown function (DUF493) LXM48_02960 PF04545 Sigma-70, region 4 LXM48_02960 PF04539 Sigma-70 region 3 LXM48_02960 PF04542 Sigma-70 region 2 LXM48_02960 PF00140 Sigma-70 factor, region 1.2 LXM48_02960 PF03979 Sigma-70 factor, region 1.1 LXM48_02960 PF04546 Sigma-70, non-essential region LXM48_02975 PF01810 LysE type translocator LXM48_02990 PF09335 SNARE associated Golgi protein LXM48_03000 PF17773 UPF0176 acylphosphatase like domain LXM48_03000 PF00581 Rhodanese-like domain LXM48_03010 PF01810 LysE type translocator LXM48_03015 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LXM48_03030 PF02261 Aspartate decarboxylase LXM48_03035 PF01195 Peptidyl-tRNA hydrolase LXM48_03040 PF01386 Ribosomal L25p family LXM48_03045 PF14572 Phosphoribosyl synthetase-associated domain LXM48_03045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LXM48_03070 PF08544 GHMP kinases C terminal LXM48_03070 PF00288 GHMP kinases N terminal domain LXM48_03075 PF03550 Outer membrane lipoprotein LolB LXM48_03085 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LXM48_03085 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LXM48_03085 PF01488 Shikimate / quinate 5-dehydrogenase LXM48_03090 PF10410 DnaB-helicase binding domain of primase LXM48_03090 PF08278 DNA primase DnaG DnaB-binding LXM48_03090 PF08275 DNA primase catalytic core, N-terminal domain LXM48_03090 PF01807 CHC2 zinc finger LXM48_03095 PF13525 Outer membrane lipoprotein LXM48_03100 PF00849 RNA pseudouridylate synthase LXM48_03100 PF01479 S4 domain LXM48_03105 PF02578 Multi-copper polyphenol oxidoreductase laccase LXM48_03110 PF03358 NADPH-dependent FMN reductase LXM48_03115 PF01668 SmpB protein LXM48_03120 PF01467 Cytidylyltransferase-like LXM48_03125 PF00037 4Fe-4S binding domain LXM48_03150 PF00795 Carbon-nitrogen hydrolase LXM48_03150 PF02540 NAD synthase LXM48_03155 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LXM48_03155 PF04717 Type VI secretion system, phage-baseplate injector LXM48_03155 PF13296 Putative type VI secretion system Rhs element Vgr LXM48_03165 PF00106 short chain dehydrogenase LXM48_03170 PF00743 Flavin-binding monooxygenase-like LXM48_03175 PF00285 Citrate synthase, C-terminal domain LXM48_03180 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LXM48_03185 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LXM48_03190 PF02910 Fumarate reductase flavoprotein C-term LXM48_03190 PF00890 FAD binding domain LXM48_03195 PF13085 2Fe-2S iron-sulfur cluster binding domain LXM48_03205 PF00676 Dehydrogenase E1 component LXM48_03205 PF16078 2-oxoglutarate dehydrogenase N-terminus LXM48_03205 PF16870 2-oxoglutarate dehydrogenase C-terminal LXM48_03205 PF02779 Transketolase, pyrimidine binding domain LXM48_03210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LXM48_03210 PF00364 Biotin-requiring enzyme LXM48_03210 PF02817 e3 binding domain LXM48_03215 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_03215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LXM48_03220 PF08442 ATP-grasp domain LXM48_03220 PF00549 CoA-ligase LXM48_03225 PF02629 CoA binding domain LXM48_03225 PF00549 CoA-ligase LXM48_03235 PF15975 Flotillin LXM48_03235 PF01145 SPFH domain / Band 7 family LXM48_03240 PF07290 Protein of unknown function (DUF1449) LXM48_03245 PF00579 tRNA synthetases class I (W and Y) LXM48_03250 PF05661 Protein of unknown function (DUF808) LXM48_03255 PF04228 Putative neutral zinc metallopeptidase LXM48_03265 PF00999 Sodium/hydrogen exchanger family LXM48_03270 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LXM48_03285 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_03295 PF01272 Transcription elongation factor, GreA/GreB, C-term LXM48_03295 PF03449 Transcription elongation factor, N-terminal LXM48_03300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LXM48_03300 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LXM48_03300 PF02142 MGS-like domain LXM48_03305 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LXM48_03305 PF00117 Glutamine amidotransferase class-I LXM48_03320 PF01985 CRS1 / YhbY (CRM) domain LXM48_03325 PF01728 FtsJ-like methyltransferase LXM48_03330 PF00004 ATPase family associated with various cellular activities (AAA) LXM48_03330 PF17862 AAA+ lid domain LXM48_03330 PF06480 FtsH Extracellular LXM48_03330 PF01434 Peptidase family M41 LXM48_03335 PF00809 Pterin binding enzyme LXM48_03355 PF09423 PhoD-like phosphatase LXM48_03355 PF16655 PhoD-like phosphatase, N-terminal domain LXM48_03375 PF03600 Citrate transporter LXM48_03380 PF00571 CBS domain LXM48_03380 PF01595 Cyclin M transmembrane N-terminal domain LXM48_03380 PF03471 Transporter associated domain LXM48_03385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_03385 PF03466 LysR substrate binding domain LXM48_03390 PF00463 Isocitrate lyase family LXM48_03395 PF01219 Prokaryotic diacylglycerol kinase LXM48_03400 PF03009 Glycerophosphoryl diester phosphodiesterase family LXM48_03405 PF00873 AcrB/AcrD/AcrF family LXM48_03410 PF00571 CBS domain LXM48_03410 PF01769 Divalent cation transporter LXM48_03410 PF03448 MgtE intracellular N domain LXM48_03425 PF01435 Peptidase family M48 LXM48_03430 PF01464 Transglycosylase SLT domain LXM48_03435 PF01171 PP-loop family LXM48_03445 PF01464 Transglycosylase SLT domain LXM48_03445 PF00497 Bacterial extracellular solute-binding proteins, family 3 LXM48_03450 PF03449 Transcription elongation factor, N-terminal LXM48_03450 PF01272 Transcription elongation factor, GreA/GreB, C-term LXM48_03480 PF00440 Bacterial regulatory proteins, tetR family LXM48_03480 PF16925 Tetracyclin repressor-like, C-terminal domain LXM48_03485 PF00698 Acyl transferase domain LXM48_03485 PF08240 Alcohol dehydrogenase GroES-like domain LXM48_03485 PF00107 Zinc-binding dehydrogenase LXM48_03485 PF16197 Ketoacyl-synthetase C-terminal extension LXM48_03485 PF00109 Beta-ketoacyl synthase, N-terminal domain LXM48_03485 PF02801 Beta-ketoacyl synthase, C-terminal domain LXM48_03485 PF08659 KR domain LXM48_03485 PF00550 Phosphopantetheine attachment site LXM48_03485 PF14765 Polyketide synthase dehydratase LXM48_03495 PF02678 Pirin LXM48_03495 PF17954 Quercetinase C-terminal cupin domain LXM48_03510 PF01208 Uroporphyrinogen decarboxylase (URO-D) LXM48_03515 PF05675 Protein of unknown function (DUF817) LXM48_03530 PF00990 Diguanylate cyclase, GGDEF domain LXM48_03540 PF01227 GTP cyclohydrolase I LXM48_03550 PF00106 short chain dehydrogenase LXM48_03565 PF00196 Bacterial regulatory proteins, luxR family LXM48_03570 PF00218 Indole-3-glycerol phosphate synthase LXM48_03575 PF02885 Glycosyl transferase family, helical bundle domain LXM48_03575 PF00591 Glycosyl transferase family, a/b domain LXM48_03580 PF00117 Glutamine amidotransferase class-I LXM48_03585 PF00120 Glutamine synthetase, catalytic domain LXM48_03585 PF03951 Glutamine synthetase, beta-Grasp domain LXM48_03595 PF04345 Chorismate lyase LXM48_03600 PF01040 UbiA prenyltransferase family LXM48_03625 PF13657 HipA N-terminal domain LXM48_03625 PF07804 HipA-like C-terminal domain LXM48_03650 PF01965 DJ-1/PfpI family LXM48_03655 PF12706 Beta-lactamase superfamily domain LXM48_03660 PF00857 Isochorismatase family LXM48_03665 PF01381 Helix-turn-helix LXM48_03680 PF00004 ATPase family associated with various cellular activities (AAA) LXM48_03680 PF10431 C-terminal, D2-small domain, of ClpB protein LXM48_03680 PF17871 AAA lid domain LXM48_03680 PF02861 Clp amino terminal domain, pathogenicity island component LXM48_03680 PF07724 AAA domain (Cdc48 subfamily) LXM48_03715 PF13180 PDZ domain LXM48_03720 PF00999 Sodium/hydrogen exchanger family LXM48_03720 PF02254 TrkA-N domain LXM48_03735 PF00924 Mechanosensitive ion channel LXM48_03735 PF12795 Mechanosensitive ion channel porin domain LXM48_03735 PF12794 Mechanosensitive ion channel inner membrane domain 1 LXM48_03745 PF13610 DDE domain LXM48_03765 PF01695 IstB-like ATP binding protein LXM48_03780 PF00665 Integrase core domain LXM48_03780 PF13936 Helix-turn-helix domain LXM48_03815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LXM48_03815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LXM48_03820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LXM48_03820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LXM48_03825 PF01784 NIF3 (NGG1p interacting factor 3) LXM48_03830 PF17820 PDZ domain LXM48_03830 PF13180 PDZ domain LXM48_03840 PF18073 Rubredoxin metal binding domain LXM48_03845 PF01235 Sodium:alanine symporter family LXM48_03850 PF00324 Amino acid permease LXM48_03860 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LXM48_03860 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LXM48_03865 PF01678 Diaminopimelate epimerase LXM48_03870 PF00589 Phage integrase family LXM48_03870 PF02899 Phage integrase, N-terminal SAM-like domain LXM48_03885 PF01037 Lrp/AsnC ligand binding domain LXM48_03890 PF01810 LysE type translocator LXM48_03895 PF01012 Electron transfer flavoprotein domain LXM48_03900 PF01012 Electron transfer flavoprotein domain LXM48_03900 PF00766 Electron transfer flavoprotein FAD-binding domain LXM48_03910 PF03989 DNA gyrase C-terminal domain, beta-propeller LXM48_03910 PF00521 DNA gyrase/topoisomerase IV, subunit A LXM48_03930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LXM48_03940 PF00266 Aminotransferase class-V LXM48_03945 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LXM48_03960 PF00557 Metallopeptidase family M24 LXM48_03965 PF00318 Ribosomal protein S2 LXM48_03970 PF00889 Elongation factor TS LXM48_03995 PF03330 Lytic transglycolase LXM48_03995 PF05036 Sporulation related domain LXM48_04000 PF13406 Transglycosylase SLT domain LXM48_04010 PF14489 QueF-like protein LXM48_04010 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LXM48_04015 PF01061 ABC-2 type transporter LXM48_04020 PF00005 ABC transporter LXM48_04030 PF00589 Phage integrase family LXM48_04030 PF13356 Arm DNA-binding domain LXM48_04105 PF02463 RecF/RecN/SMC N terminal domain LXM48_04110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LXM48_04125 PF00994 Probable molybdopterin binding domain LXM48_04125 PF03454 MoeA C-terminal region (domain IV) LXM48_04125 PF03453 MoeA N-terminal region (domain I and II) LXM48_04130 PF01967 MoaC family LXM48_04130 PF00994 Probable molybdopterin binding domain LXM48_04135 PF06463 Molybdenum Cofactor Synthesis C LXM48_04135 PF04055 Radical SAM superfamily LXM48_04140 PF00384 Molybdopterin oxidoreductase LXM48_04145 PF02634 FdhD/NarQ family LXM48_04150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_04150 PF03459 TOBE domain LXM48_04160 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_04165 PF03459 TOBE domain LXM48_04165 PF00005 ABC transporter LXM48_04170 PF13737 Transposase DDE domain LXM48_04195 PF00464 Serine hydroxymethyltransferase LXM48_04200 PF01272 Transcription elongation factor, GreA/GreB, C-term LXM48_04200 PF14760 Rnk N-terminus LXM48_04210 PF05816 Toxic anion resistance protein (TelA) LXM48_04220 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_04220 PF13192 Thioredoxin domain LXM48_04225 PF00037 4Fe-4S binding domain LXM48_04230 PF01136 Peptidase family U32 LXM48_04230 PF16325 Peptidase family U32 C-terminal domain LXM48_04235 PF13411 MerR HTH family regulatory protein LXM48_04265 PF13737 Transposase DDE domain LXM48_04285 PF00175 Oxidoreductase NAD-binding domain LXM48_04285 PF00970 Oxidoreductase FAD-binding domain LXM48_04290 PF18389 TrmO C-terminal domain LXM48_04290 PF01980 tRNA-methyltransferase O LXM48_04305 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LXM48_04305 PF00437 Type II/IV secretion system protein LXM48_04315 PF00486 Transcriptional regulatory protein, C terminal LXM48_04315 PF00072 Response regulator receiver domain LXM48_04320 PF08521 Two-component sensor kinase N-terminal LXM48_04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_04320 PF00512 His Kinase A (phospho-acceptor) domain LXM48_04330 PF00293 NUDIX domain LXM48_04340 PF00912 Transglycosylase LXM48_04340 PF00905 Penicillin binding protein transpeptidase domain LXM48_04340 PF14814 Bifunctional transglycosylase second domain LXM48_04345 PF01513 ATP-NAD kinase LXM48_04350 PF07023 Protein of unknown function (DUF1315) LXM48_04360 PF02885 Glycosyl transferase family, helical bundle domain LXM48_04360 PF00591 Glycosyl transferase family, a/b domain LXM48_04365 PF00375 Sodium:dicarboxylate symporter family LXM48_04370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_04370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LXM48_04370 PF02770 Acyl-CoA dehydrogenase, middle domain LXM48_04375 PF01965 DJ-1/PfpI family LXM48_04380 PF00800 Prephenate dehydratase LXM48_04380 PF01817 Chorismate mutase type II LXM48_04380 PF01842 ACT domain LXM48_04385 PF00155 Aminotransferase class I and II LXM48_04390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LXM48_04410 PF03883 Peroxide stress protein YaaA LXM48_04420 PF00875 DNA photolyase LXM48_04420 PF03441 FAD binding domain of DNA photolyase LXM48_04430 PF00860 Permease family LXM48_04435 PF00962 Adenosine/AMP deaminase LXM48_04445 PF01292 Prokaryotic cytochrome b561 LXM48_04460 PF01351 Ribonuclease HII LXM48_04465 PF02599 Global regulator protein family LXM48_04470 PF00696 Amino acid kinase family LXM48_04470 PF01842 ACT domain LXM48_04470 PF13840 ACT domain LXM48_04475 PF02272 DHHA1 domain LXM48_04475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LXM48_04475 PF01411 tRNA synthetases class II (A) LXM48_04480 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LXM48_04480 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LXM48_04495 PF03591 AzlC protein LXM48_04500 PF01037 Lrp/AsnC ligand binding domain LXM48_04500 PF13404 AsnC-type helix-turn-helix domain LXM48_04510 PF13393 Histidyl-tRNA synthetase LXM48_04515 PF00709 Adenylosuccinate synthetase LXM48_04530 PF00248 Aldo/keto reductase family LXM48_04535 PF00027 Cyclic nucleotide-binding domain LXM48_04535 PF13545 Crp-like helix-turn-helix domain LXM48_04540 PF02566 OsmC-like protein LXM48_04545 PF17871 AAA lid domain LXM48_04545 PF10431 C-terminal, D2-small domain, of ClpB protein LXM48_04545 PF02861 Clp amino terminal domain, pathogenicity island component LXM48_04545 PF07724 AAA domain (Cdc48 subfamily) LXM48_04545 PF00004 ATPase family associated with various cellular activities (AAA) LXM48_04555 PF01170 Putative RNA methylase family UPF0020 LXM48_04555 PF02926 THUMP domain LXM48_04555 PF10672 S-adenosylmethionine-dependent methyltransferase LXM48_04565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LXM48_04565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LXM48_04570 PF01979 Amidohydrolase family LXM48_04585 PF02667 Short chain fatty acid transporter LXM48_04590 PF01144 Coenzyme A transferase LXM48_04595 PF01144 Coenzyme A transferase LXM48_04600 PF00682 HMGL-like LXM48_04605 PF02785 Biotin carboxylase C-terminal domain LXM48_04605 PF00289 Biotin carboxylase, N-terminal domain LXM48_04605 PF00364 Biotin-requiring enzyme LXM48_04605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LXM48_04605 PF18140 Propionyl-coenzyme A carboxylase BT domain LXM48_04610 PF00378 Enoyl-CoA hydratase/isomerase LXM48_04615 PF01039 Carboxyl transferase domain LXM48_04620 PF02770 Acyl-CoA dehydrogenase, middle domain LXM48_04620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LXM48_04620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_04625 PF17925 Tetracyclin repressor-like, C-terminal domain LXM48_04625 PF00440 Bacterial regulatory proteins, tetR family LXM48_04630 PF00501 AMP-binding enzyme LXM48_04630 PF13193 AMP-binding enzyme C-terminal domain LXM48_04635 PF04055 Radical SAM superfamily LXM48_04635 PF06968 Biotin and Thiamin Synthesis associated domain LXM48_04660 PF02390 Putative methyltransferase LXM48_04670 PF01740 STAS domain LXM48_04670 PF00916 Sulfate permease family LXM48_04675 PF02798 Glutathione S-transferase, N-terminal domain LXM48_04675 PF00043 Glutathione S-transferase, C-terminal domain LXM48_04680 PF02525 Flavodoxin-like fold LXM48_04695 PF05690 Thiazole biosynthesis protein ThiG LXM48_04705 PF04241 Protein of unknown function (DUF423) LXM48_04710 PF04545 Sigma-70, region 4 LXM48_04710 PF00140 Sigma-70 factor, region 1.2 LXM48_04710 PF04542 Sigma-70 region 2 LXM48_04720 PF00313 'Cold-shock' DNA-binding domain LXM48_04725 PF00271 Helicase conserved C-terminal domain LXM48_04725 PF00270 DEAD/DEAH box helicase LXM48_04735 PF00881 Nitroreductase family LXM48_04740 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LXM48_04740 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LXM48_04760 PF01180 Dihydroorotate dehydrogenase LXM48_04770 PF00156 Phosphoribosyl transferase domain LXM48_04785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LXM48_04785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LXM48_04790 PF01435 Peptidase family M48 LXM48_04795 PF09424 Yqey-like protein LXM48_04800 PF01165 Ribosomal protein S21 LXM48_04805 PF00814 Glycoprotease family LXM48_04810 PF00857 Isochorismatase family LXM48_04825 PF00069 Protein kinase domain LXM48_04825 PF03793 PASTA domain LXM48_04865 PF00753 Metallo-beta-lactamase superfamily LXM48_04865 PF16123 Hydroxyacylglutathione hydrolase C-terminus LXM48_04870 PF00578 AhpC/TSA family LXM48_04870 PF10417 C-terminal domain of 1-Cys peroxiredoxin LXM48_04875 PF11898 Domain of unknown function (DUF3418) LXM48_04875 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LXM48_04875 PF00270 DEAD/DEAH box helicase LXM48_04875 PF00271 Helicase conserved C-terminal domain LXM48_04875 PF04408 Helicase associated domain (HA2) LXM48_04880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LXM48_04880 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LXM48_04895 PF00005 ABC transporter LXM48_04905 PF07690 Major Facilitator Superfamily LXM48_04910 PF18267 Rubredoxin NAD+ reductase C-terminal domain LXM48_04910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LXM48_04910 PF04324 BFD-like [2Fe-2S] binding domain LXM48_04910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LXM48_04910 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_04915 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_04915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LXM48_04915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LXM48_04915 PF18267 Rubredoxin NAD+ reductase C-terminal domain LXM48_04915 PF04324 BFD-like [2Fe-2S] binding domain LXM48_04920 PF04324 BFD-like [2Fe-2S] binding domain LXM48_04920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LXM48_04920 PF00384 Molybdopterin oxidoreductase LXM48_04920 PF01568 Molydopterin dinucleotide binding domain LXM48_04925 PF12804 MobA-like NTP transferase domain LXM48_04930 PF04055 Radical SAM superfamily LXM48_04930 PF06463 Molybdenum Cofactor Synthesis C LXM48_04940 PF02391 MoaE protein LXM48_04945 PF01406 tRNA synthetases class I (C) catalytic domain LXM48_04945 PF09190 DALR domain LXM48_04960 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LXM48_04965 PF02277 Phosphoribosyltransferase LXM48_04970 PF00300 Histidine phosphatase superfamily (branch 1) LXM48_04975 PF02654 Cobalamin-5-phosphate synthase LXM48_04980 PF00571 CBS domain LXM48_04980 PF01380 SIS domain LXM48_04995 PF03968 OstA-like protein LXM48_05000 PF00005 ABC transporter LXM48_05000 PF12399 Branched-chain amino acid ATP-binding cassette transporter LXM48_05005 PF01205 Uncharacterized protein family UPF0029 LXM48_05010 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_05010 PF14602 Hexapeptide repeat of succinyl-transferase LXM48_05010 PF12804 MobA-like NTP transferase domain LXM48_05020 PF01596 O-methyltransferase LXM48_05030 PF11953 Domain of unknown function (DUF3470) LXM48_05030 PF00037 4Fe-4S binding domain LXM48_05035 PF05192 MutS domain III LXM48_05035 PF05190 MutS family domain IV LXM48_05035 PF00488 MutS domain V LXM48_05035 PF01624 MutS domain I LXM48_05035 PF05188 MutS domain II LXM48_05050 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_05055 PF00588 SpoU rRNA Methylase family LXM48_05060 PF07733 Bacterial DNA polymerase III alpha NTPase domain LXM48_05060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LXM48_05060 PF14579 Helix-hairpin-helix motif LXM48_05060 PF02811 PHP domain LXM48_05060 PF01336 OB-fold nucleic acid binding domain LXM48_05070 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_05075 PF09383 NIL domain LXM48_05075 PF00005 ABC transporter LXM48_05080 PF03180 NLPA lipoprotein LXM48_05085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LXM48_05085 PF02843 Phosphoribosylglycinamide synthetase, C domain LXM48_05085 PF02844 Phosphoribosylglycinamide synthetase, N domain LXM48_05090 PF01808 AICARFT/IMPCHase bienzyme LXM48_05090 PF02142 MGS-like domain LXM48_05095 PF02954 Bacterial regulatory protein, Fis family LXM48_05125 PF13932 GidA associated domain LXM48_05125 PF01134 Glucose inhibited division protein A LXM48_05140 PF14403 Circularly permuted ATP-grasp type 2 LXM48_05150 PF01841 Transglutaminase-like superfamily LXM48_05150 PF08379 Bacterial transglutaminase-like N-terminal region LXM48_05165 PF01168 Alanine racemase, N-terminal domain LXM48_05165 PF00842 Alanine racemase, C-terminal domain LXM48_05170 PF00772 DnaB-like helicase N terminal domain LXM48_05170 PF03796 DnaB-like helicase C terminal domain LXM48_05175 PF03948 Ribosomal protein L9, C-terminal domain LXM48_05175 PF01281 Ribosomal protein L9, N-terminal domain LXM48_05180 PF01084 Ribosomal protein S18 LXM48_05185 PF01250 Ribosomal protein S6 LXM48_05200 PF01040 UbiA prenyltransferase family LXM48_05205 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LXM48_05210 PF00510 Cytochrome c oxidase subunit III LXM48_05215 PF00115 Cytochrome C and Quinol oxidase polypeptide I LXM48_05220 PF06481 COX Aromatic Rich Motif LXM48_05220 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LXM48_05230 PF02896 PEP-utilising enzyme, TIM barrel domain LXM48_05230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LXM48_05230 PF00391 PEP-utilising enzyme, mobile domain LXM48_05235 PF03618 Kinase/pyrophosphorylase LXM48_05250 PF00296 Luciferase-like monooxygenase LXM48_05265 PF03462 PCRF domain LXM48_05265 PF00472 RF-1 domain LXM48_05270 PF17827 PrmC N-terminal domain LXM48_05270 PF13847 Methyltransferase domain LXM48_05275 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_05280 PF09084 NMT1/THI5 like LXM48_05300 PF12833 Helix-turn-helix domain LXM48_05300 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LXM48_05305 PF00106 short chain dehydrogenase LXM48_05310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_05310 PF02770 Acyl-CoA dehydrogenase, middle domain LXM48_05310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LXM48_05315 PF13193 AMP-binding enzyme C-terminal domain LXM48_05315 PF00501 AMP-binding enzyme LXM48_05320 PF00899 ThiF family LXM48_05325 PF03109 ABC1 family LXM48_05330 PF02152 Dihydroneopterin aldolase LXM48_05345 PF03232 Ubiquinone biosynthesis protein COQ7 LXM48_05350 PF07690 Major Facilitator Superfamily LXM48_05355 PF01103 Surface antigen LXM48_05355 PF07244 Surface antigen variable number repeat LXM48_05355 PF17243 POTRA domain TamA domain 1 LXM48_05385 PF11791 Aconitate B N-terminal domain LXM48_05385 PF06434 Aconitate hydratase 2 N-terminus LXM48_05385 PF00330 Aconitase family (aconitate hydratase) LXM48_05405 PF07715 TonB-dependent Receptor Plug Domain LXM48_05405 PF07660 Secretin and TonB N terminus short domain LXM48_05405 PF00593 TonB dependent receptor LXM48_05410 PF03616 Sodium/glutamate symporter LXM48_05415 PF01037 Lrp/AsnC ligand binding domain LXM48_05420 PF00324 Amino acid permease LXM48_05440 PF05525 Branched-chain amino acid transport protein LXM48_05445 PF00557 Metallopeptidase family M24 LXM48_05450 PF03466 LysR substrate binding domain LXM48_05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_05455 PF04607 Region found in RelA / SpoT proteins LXM48_05455 PF02824 TGS domain LXM48_05455 PF13291 ACT domain LXM48_05465 PF00072 Response regulator receiver domain LXM48_05465 PF02954 Bacterial regulatory protein, Fis family LXM48_05465 PF00158 Sigma-54 interaction domain LXM48_05470 PF00512 His Kinase A (phospho-acceptor) domain LXM48_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_05470 PF00989 PAS fold LXM48_05475 PF04055 Radical SAM superfamily LXM48_05475 PF00919 Uncharacterized protein family UPF0004 LXM48_05475 PF18693 TRAM domain LXM48_05480 PF00696 Amino acid kinase family LXM48_05485 PF01765 Ribosome recycling factor LXM48_05490 PF01255 Putative undecaprenyl diphosphate synthase LXM48_05500 PF13288 DXP reductoisomerase C-terminal domain LXM48_05500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LXM48_05500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LXM48_05505 PF02163 Peptidase family M50 LXM48_05505 PF17820 PDZ domain LXM48_05505 PF13180 PDZ domain LXM48_05510 PF01103 Surface antigen LXM48_05510 PF07244 Surface antigen variable number repeat LXM48_05520 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_05520 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LXM48_05525 PF07977 FabA-like domain LXM48_05530 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LXM48_05530 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_05545 PF02631 RecX family LXM48_05550 PF00154 recA bacterial DNA recombination protein LXM48_05555 PF01479 S4 domain LXM48_05560 PF13419 Haloacid dehalogenase-like hydrolase LXM48_05575 PF13340 Putative transposase of IS4/5 family (DUF4096) LXM48_05585 PF00459 Inositol monophosphatase family LXM48_05600 PF00041 Fibronectin type III domain LXM48_05600 PF12561 ToxR activated gene A lipoprotein domain LXM48_05605 PF01649 Ribosomal protein S20 LXM48_05610 PF13460 NAD(P)H-binding LXM48_05615 PF03737 Aldolase/RraA LXM48_05635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_05635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LXM48_05650 PF07690 Major Facilitator Superfamily LXM48_05655 PF00248 Aldo/keto reductase family LXM48_05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_05660 PF03466 LysR substrate binding domain LXM48_05670 PF00117 Glutamine amidotransferase class-I LXM48_05670 PF06418 CTP synthase N-terminus LXM48_05675 PF00793 DAHP synthetase I family LXM48_05680 PF00113 Enolase, C-terminal TIM barrel domain LXM48_05680 PF03952 Enolase, N-terminal domain LXM48_05685 PF04977 Septum formation initiator LXM48_05690 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LXM48_05695 PF01098 Cell cycle protein LXM48_05715 PF06039 Malate:quinone oxidoreductase (Mqo) LXM48_05720 PF05199 GMC oxidoreductase LXM48_05720 PF00732 GMC oxidoreductase LXM48_05725 PF00171 Aldehyde dehydrogenase family LXM48_05730 PF13977 BetI-type transcriptional repressor, C-terminal LXM48_05730 PF00440 Bacterial regulatory proteins, tetR family LXM48_05735 PF02028 BCCT, betaine/carnitine/choline family transporter LXM48_05750 PF08173 Membrane bound YbgT-like protein LXM48_05755 PF02322 Cytochrome bd terminal oxidase subunit II LXM48_05760 PF01654 Cytochrome bd terminal oxidase subunit I LXM48_05770 PF07290 Protein of unknown function (DUF1449) LXM48_05780 PF00294 pfkB family carbohydrate kinase LXM48_05790 PF08367 Peptidase M16C associated LXM48_05790 PF00675 Insulinase (Peptidase family M16) LXM48_05790 PF05193 Peptidase M16 inactive domain LXM48_05795 PF02253 Phospholipase A1 LXM48_05800 PF02386 Cation transport protein LXM48_05805 PF02080 TrkA-C domain LXM48_05805 PF02254 TrkA-N domain LXM48_05815 PF00291 Pyridoxal-phosphate dependent enzyme LXM48_05815 PF00585 C-terminal regulatory domain of Threonine dehydratase LXM48_05820 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LXM48_05830 PF17151 Periplasmic sensor domain LXM48_05830 PF00990 Diguanylate cyclase, GGDEF domain LXM48_05835 PF02774 Semialdehyde dehydrogenase, dimerisation domain LXM48_05835 PF01118 Semialdehyde dehydrogenase, NAD binding domain LXM48_05845 PF02617 ATP-dependent Clp protease adaptor protein ClpS LXM48_05850 PF00004 ATPase family associated with various cellular activities (AAA) LXM48_05850 PF07724 AAA domain (Cdc48 subfamily) LXM48_05850 PF02861 Clp amino terminal domain, pathogenicity island component LXM48_05850 PF10431 C-terminal, D2-small domain, of ClpB protein LXM48_05850 PF17871 AAA lid domain LXM48_05855 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LXM48_05865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LXM48_05865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LXM48_05870 PF00440 Bacterial regulatory proteins, tetR family LXM48_05880 PF00285 Citrate synthase, C-terminal domain LXM48_05890 PF00756 Putative esterase LXM48_05895 PF00501 AMP-binding enzyme LXM48_05895 PF13193 AMP-binding enzyme C-terminal domain LXM48_05905 PF04055 Radical SAM superfamily LXM48_05905 PF06968 Biotin and Thiamin Synthesis associated domain LXM48_05910 PF08331 Domain of unknown function (DUF1730) LXM48_05915 PF01256 Carbohydrate kinase LXM48_05915 PF03853 YjeF-related protein N-terminus LXM48_05920 PF00708 Acylphosphatase LXM48_05925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LXM48_05930 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_05935 PF00768 D-alanyl-D-alanine carboxypeptidase LXM48_05935 PF07943 Penicillin-binding protein 5, C-terminal domain LXM48_05945 PF00576 HIUase/Transthyretin family LXM48_05950 PF03971 Monomeric isocitrate dehydrogenase LXM48_05970 PF00005 ABC transporter LXM48_05985 PF00849 RNA pseudouridylate synthase LXM48_05990 PF18337 RapA N-terminal Tudor like domain LXM48_05990 PF00271 Helicase conserved C-terminal domain LXM48_05990 PF12137 RNA polymerase recycling family C-terminal LXM48_05990 PF00176 SNF2 family N-terminal domain LXM48_05990 PF18339 RapA N-terminal Tudor like domain 1 LXM48_06005 PF00440 Bacterial regulatory proteins, tetR family LXM48_06010 PF00970 Oxidoreductase FAD-binding domain LXM48_06010 PF00111 2Fe-2S iron-sulfur cluster binding domain LXM48_06010 PF00175 Oxidoreductase NAD-binding domain LXM48_06015 PF00487 Fatty acid desaturase LXM48_06030 PF07759 Protein of unknown function (DUF1615) LXM48_06040 PF00313 'Cold-shock' DNA-binding domain LXM48_06070 PF01638 HxlR-like helix-turn-helix LXM48_06075 PF08240 Alcohol dehydrogenase GroES-like domain LXM48_06075 PF00107 Zinc-binding dehydrogenase LXM48_06080 PF13737 Transposase DDE domain LXM48_06090 PF00313 'Cold-shock' DNA-binding domain LXM48_06105 PF00593 TonB dependent receptor LXM48_06105 PF07715 TonB-dependent Receptor Plug Domain LXM48_06110 PF07715 TonB-dependent Receptor Plug Domain LXM48_06110 PF07660 Secretin and TonB N terminus short domain LXM48_06110 PF00593 TonB dependent receptor LXM48_06145 PF01207 Dihydrouridine synthase (Dus) LXM48_06150 PF03060 Nitronate monooxygenase LXM48_06175 PF13192 Thioredoxin domain LXM48_06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_06195 PF00155 Aminotransferase class I and II LXM48_06200 PF01641 SelR domain LXM48_06205 PF00255 Glutathione peroxidase LXM48_06225 PF00155 Aminotransferase class I and II LXM48_06230 PF01909 Nucleotidyltransferase domain LXM48_06230 PF08335 GlnD PII-uridylyltransferase LXM48_06230 PF01966 HD domain LXM48_06235 PF02222 ATP-grasp domain LXM48_06240 PF05437 Branched-chain amino acid transport protein (AzlD) LXM48_06245 PF03591 AzlC protein LXM48_06255 PF00027 Cyclic nucleotide-binding domain LXM48_06255 PF13545 Crp-like helix-turn-helix domain LXM48_06270 PF01926 50S ribosome-binding GTPase LXM48_06270 PF06071 Protein of unknown function (DUF933) LXM48_06285 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_06290 PF00005 ABC transporter LXM48_06290 PF09383 NIL domain LXM48_06295 PF03180 NLPA lipoprotein LXM48_06300 PF03180 NLPA lipoprotein LXM48_06305 PF00296 Luciferase-like monooxygenase LXM48_06310 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LXM48_06310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_06315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_06315 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LXM48_06335 PF01709 Transcriptional regulator LXM48_06340 PF01553 Acyltransferase LXM48_06365 PF02542 YgbB family LXM48_06375 PF00793 DAHP synthetase I family LXM48_06380 PF01925 Sulfite exporter TauE/SafE LXM48_06405 PF02684 Lipid-A-disaccharide synthetase LXM48_06410 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LXM48_06410 PF18381 YcaO cyclodehydratase C-terminal domain LXM48_06415 PF12852 Cupin LXM48_06415 PF12833 Helix-turn-helix domain LXM48_06420 PF00487 Fatty acid desaturase LXM48_06425 PF04073 Aminoacyl-tRNA editing domain LXM48_06430 PF04183 IucA / IucC family LXM48_06430 PF06276 Ferric iron reductase FhuF-like transporter LXM48_06435 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LXM48_06440 PF06276 Ferric iron reductase FhuF-like transporter LXM48_06440 PF04183 IucA / IucC family LXM48_06455 PF07690 Major Facilitator Superfamily LXM48_06460 PF00593 TonB dependent receptor LXM48_06460 PF07715 TonB-dependent Receptor Plug Domain LXM48_06470 PF04172 LrgB-like family LXM48_06475 PF03788 LrgA family LXM48_06480 PF03466 LysR substrate binding domain LXM48_06480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_06485 PF13419 Haloacid dehalogenase-like hydrolase LXM48_06490 PF01638 HxlR-like helix-turn-helix LXM48_06510 PF02635 DsrE/DsrF-like family LXM48_06515 PF16363 GDP-mannose 4,6 dehydratase LXM48_06520 PF00206 Lyase LXM48_06520 PF10415 Fumarase C C-terminus LXM48_06550 PF00106 short chain dehydrogenase LXM48_06555 PF06865 Pyrimidine/purine nucleoside phosphorylase LXM48_06575 PF13091 PLD-like domain LXM48_06580 PF08240 Alcohol dehydrogenase GroES-like domain LXM48_06580 PF00107 Zinc-binding dehydrogenase LXM48_06590 PF00487 Fatty acid desaturase LXM48_06595 PF00990 Diguanylate cyclase, GGDEF domain LXM48_06595 PF03707 Bacterial signalling protein N terminal repeat LXM48_06595 PF00563 EAL domain LXM48_06600 PF00793 DAHP synthetase I family LXM48_06605 PF00437 Type II/IV secretion system protein LXM48_06610 PF07690 Major Facilitator Superfamily LXM48_06615 PF01597 Glycine cleavage H-protein LXM48_06620 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LXM48_06620 PF12833 Helix-turn-helix domain LXM48_06625 PF00005 ABC transporter LXM48_06625 PF00664 ABC transporter transmembrane region LXM48_06635 PF00924 Mechanosensitive ion channel LXM48_06640 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LXM48_06650 PF00375 Sodium:dicarboxylate symporter family LXM48_06655 PF01740 STAS domain LXM48_06655 PF00916 Sulfate permease family LXM48_06665 PF12697 Alpha/beta hydrolase family LXM48_06670 PF00296 Luciferase-like monooxygenase LXM48_06675 PF00857 Isochorismatase family LXM48_06680 PF01042 Endoribonuclease L-PSP LXM48_06685 PF01613 Flavin reductase like domain LXM48_06690 PF00860 Permease family LXM48_06695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LXM48_06695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LXM48_06700 PF00291 Pyridoxal-phosphate dependent enzyme LXM48_06705 PF00440 Bacterial regulatory proteins, tetR family LXM48_06705 PF08360 QacR-like protein, C-terminal region LXM48_06710 PF00108 Thiolase, N-terminal domain LXM48_06710 PF02803 Thiolase, C-terminal domain LXM48_06715 PF03466 LysR substrate binding domain LXM48_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_06730 PF02785 Biotin carboxylase C-terminal domain LXM48_06730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LXM48_06730 PF00289 Biotin carboxylase, N-terminal domain LXM48_06740 PF02785 Biotin carboxylase C-terminal domain LXM48_06740 PF00289 Biotin carboxylase, N-terminal domain LXM48_06740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LXM48_06745 PF00364 Biotin-requiring enzyme LXM48_06750 PF01220 Dehydroquinase class II LXM48_06755 PF12146 Serine aminopeptidase, S33 LXM48_06760 PF00108 Thiolase, N-terminal domain LXM48_06760 PF02803 Thiolase, C-terminal domain LXM48_06765 PF01144 Coenzyme A transferase LXM48_06770 PF01144 Coenzyme A transferase LXM48_06775 PF03594 Benzoate membrane transport protein LXM48_06780 PF00106 short chain dehydrogenase LXM48_06785 PF00111 2Fe-2S iron-sulfur cluster binding domain LXM48_06785 PF00970 Oxidoreductase FAD-binding domain LXM48_06785 PF00175 Oxidoreductase NAD-binding domain LXM48_06790 PF00866 Ring hydroxylating beta subunit LXM48_06795 PF00355 Rieske [2Fe-2S] domain LXM48_06795 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LXM48_06800 PF00775 Dioxygenase LXM48_06800 PF04444 Catechol dioxygenase N terminus LXM48_06805 PF02426 Muconolactone delta-isomerase LXM48_06810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LXM48_06810 PF13378 Enolase C-terminal domain-like LXM48_06815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_06815 PF03466 LysR substrate binding domain LXM48_06820 PF07690 Major Facilitator Superfamily LXM48_06845 PF00106 short chain dehydrogenase LXM48_06850 PF01545 Cation efflux family LXM48_06885 PF00440 Bacterial regulatory proteins, tetR family LXM48_06890 PF13737 Transposase DDE domain LXM48_06905 PF00691 OmpA family LXM48_06905 PF05736 OprF membrane domain LXM48_06915 PF06744 Type VI secretion protein IcmF C-terminal LXM48_06915 PF14331 ImcF-related N-terminal domain LXM48_06915 PF06761 Intracellular multiplication and human macrophage-killing LXM48_06930 PF05947 Type VI secretion system, TssF LXM48_06945 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LXM48_06960 PF07724 AAA domain (Cdc48 subfamily) LXM48_06960 PF00004 ATPase family associated with various cellular activities (AAA) LXM48_06960 PF10431 C-terminal, D2-small domain, of ClpB protein LXM48_06960 PF17871 AAA lid domain LXM48_06965 PF06812 ImpA, N-terminal, type VI secretion system LXM48_06970 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LXM48_06990 PF12697 Alpha/beta hydrolase family LXM48_06995 PF00753 Metallo-beta-lactamase superfamily LXM48_06995 PF04273 Putative phosphatase (DUF442) LXM48_07005 PF04143 Sulphur transport LXM48_07035 PF00005 ABC transporter LXM48_07050 PF00893 Small Multidrug Resistance protein LXM48_07060 PF01402 Ribbon-helix-helix protein, copG family LXM48_07060 PF08753 NikR C terminal nickel binding domain LXM48_07070 PF15887 Putative zinc-binding metallo-peptidase LXM48_07070 PF10005 zinc-ribbon domain LXM48_07090 PF12832 MFS_1 like family LXM48_07095 PF01425 Amidase LXM48_07100 PF00990 Diguanylate cyclase, GGDEF domain LXM48_07110 PF01266 FAD dependent oxidoreductase LXM48_07120 PF01264 Chorismate synthase LXM48_07125 PF05175 Methyltransferase small domain LXM48_07140 PF03109 ABC1 family LXM48_07145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LXM48_07145 PF02770 Acyl-CoA dehydrogenase, middle domain LXM48_07145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_07150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LXM48_07150 PF02770 Acyl-CoA dehydrogenase, middle domain LXM48_07150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_07200 PF00448 SRP54-type protein, GTPase domain LXM48_07200 PF02881 SRP54-type protein, helical bundle domain LXM48_07205 PF00675 Insulinase (Peptidase family M16) LXM48_07205 PF05193 Peptidase M16 inactive domain LXM48_07230 PF00571 CBS domain LXM48_07235 PF00291 Pyridoxal-phosphate dependent enzyme LXM48_07245 PF17862 AAA+ lid domain LXM48_07245 PF00004 ATPase family associated with various cellular activities (AAA) LXM48_07245 PF01434 Peptidase family M41 LXM48_07255 PF05166 YcgL domain LXM48_07260 PF01612 3'-5' exonuclease LXM48_07260 PF00570 HRDC domain LXM48_07265 PF02132 RecR protein LXM48_07265 PF13662 Toprim domain LXM48_07270 PF02575 YbaB/EbfC DNA-binding family LXM48_07275 PF01053 Cys/Met metabolism PLP-dependent enzyme LXM48_07285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LXM48_07285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LXM48_07295 PF13737 Transposase DDE domain LXM48_07305 PF01230 HIT domain LXM48_07315 PF00267 Gram-negative porin LXM48_07340 PF00216 Bacterial DNA-binding protein LXM48_07355 PF02082 Transcriptional regulator LXM48_07360 PF00266 Aminotransferase class-V LXM48_07365 PF01592 NifU-like N terminal domain LXM48_07370 PF01521 Iron-sulphur cluster biosynthesis LXM48_07375 PF00226 DnaJ domain LXM48_07375 PF07743 HSCB C-terminal oligomerisation domain LXM48_07380 PF00012 Hsp70 protein LXM48_07385 PF00111 2Fe-2S iron-sulfur cluster binding domain LXM48_07390 PF00211 Adenylate and Guanylate cyclase catalytic domain LXM48_07400 PF00270 DEAD/DEAH box helicase LXM48_07400 PF00271 Helicase conserved C-terminal domain LXM48_07400 PF03461 TRCF domain LXM48_07400 PF17757 UvrB interaction domain LXM48_07400 PF02559 CarD-like/TRCF domain LXM48_07410 PF10415 Fumarase C C-terminus LXM48_07410 PF00206 Lyase LXM48_07415 PF00474 Sodium:solute symporter family LXM48_07420 PF01037 Lrp/AsnC ligand binding domain LXM48_07425 PF00171 Aldehyde dehydrogenase family LXM48_07425 PF01619 Proline dehydrogenase LXM48_07425 PF14850 DNA-binding domain of Proline dehydrogenase LXM48_07425 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LXM48_07430 PF05958 tRNA (Uracil-5-)-methyltransferase LXM48_07455 PF01062 Bestrophin, RFP-TM, chloride channel LXM48_07460 PF00749 tRNA synthetases class I (E and Q), catalytic domain LXM48_07460 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LXM48_07465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LXM48_07470 PF00149 Calcineurin-like phosphoesterase LXM48_07480 PF00881 Nitroreductase family LXM48_07495 PF01116 Fructose-bisphosphate aldolase class-II LXM48_07505 PF00162 Phosphoglycerate kinase LXM48_07515 PF02545 Maf-like protein LXM48_07525 PF08007 Cupin superfamily protein LXM48_07530 PF07730 Histidine kinase LXM48_07535 PF00196 Bacterial regulatory proteins, luxR family LXM48_07535 PF00072 Response regulator receiver domain LXM48_07540 PF01645 Conserved region in glutamate synthase LXM48_07555 PF01565 FAD binding domain LXM48_07555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LXM48_07560 PF01451 Low molecular weight phosphotyrosine protein phosphatase LXM48_07565 PF00465 Iron-containing alcohol dehydrogenase LXM48_07570 PF03061 Thioesterase superfamily LXM48_07575 PF12170 DNA polymerase III tau subunit V interacting with alpha LXM48_07575 PF12169 DNA polymerase III subunits gamma and tau domain III LXM48_07575 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LXM48_07600 PF02803 Thiolase, C-terminal domain LXM48_07600 PF00108 Thiolase, N-terminal domain LXM48_07615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_07615 PF03466 LysR substrate binding domain LXM48_07620 PF00923 Transaldolase/Fructose-6-phosphate aldolase LXM48_07625 PF01810 LysE type translocator LXM48_07630 PF03594 Benzoate membrane transport protein LXM48_07635 PF00440 Bacterial regulatory proteins, tetR family LXM48_07640 PF00893 Small Multidrug Resistance protein LXM48_07645 PF00135 Carboxylesterase family LXM48_07655 PF00582 Universal stress protein family LXM48_07665 PF01433 Peptidase family M1 domain LXM48_07665 PF11940 Domain of unknown function (DUF3458) Ig-like fold LXM48_07665 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LXM48_07680 PF02110 Hydroxyethylthiazole kinase family LXM48_07690 PF03471 Transporter associated domain LXM48_07690 PF03741 Integral membrane protein TerC family LXM48_07710 PF01274 Malate synthase LXM48_07715 PF03969 AFG1-like ATPase LXM48_07725 PF00743 Flavin-binding monooxygenase-like LXM48_07730 PF03956 Lysine exporter LysO LXM48_07735 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LXM48_07745 PF00216 Bacterial DNA-binding protein LXM48_07750 PF00575 S1 RNA binding domain LXM48_07755 PF02224 Cytidylate kinase LXM48_07765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LXM48_07775 PF03167 Uracil DNA glycosylase superfamily LXM48_07785 PF03934 Type II secretion system (T2SS), protein K LXM48_07790 PF07963 Prokaryotic N-terminal methylation motif LXM48_07790 PF11612 Type II secretion system (T2SS), protein J LXM48_07795 PF02501 Type II secretion system (T2SS), protein I LXM48_07795 PF07963 Prokaryotic N-terminal methylation motif LXM48_07800 PF07963 Prokaryotic N-terminal methylation motif LXM48_07810 PF01026 TatD related DNase LXM48_07820 PF09115 DNA polymerase III, delta subunit, C terminal LXM48_07825 PF02348 Cytidylyltransferase LXM48_07830 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LXM48_07835 PF00664 ABC transporter transmembrane region LXM48_07835 PF00005 ABC transporter LXM48_07845 PF01618 MotA/TolQ/ExbB proton channel family LXM48_07850 PF17762 HTH domain found in ParB protein LXM48_07850 PF02195 ParB-like nuclease domain LXM48_07855 PF13614 AAA domain LXM48_07860 PF02527 rRNA small subunit methyltransferase G LXM48_07865 PF00483 Nucleotidyl transferase LXM48_07870 PF01636 Phosphotransferase enzyme family LXM48_07875 PF04453 LPS transport system D LXM48_07875 PF03968 OstA-like protein LXM48_07880 PF00639 PPIC-type PPIASE domain LXM48_07880 PF09312 SurA N-terminal domain LXM48_07885 PF17209 Hfq protein LXM48_07895 PF01119 DNA mismatch repair protein, C-terminal domain LXM48_07895 PF08676 MutL C terminal dimerisation domain LXM48_07900 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LXM48_07905 PF00849 RNA pseudouridylate synthase LXM48_07920 PF00849 RNA pseudouridylate synthase LXM48_07920 PF01479 S4 domain LXM48_07925 PF04284 Protein of unknown function (DUF441) LXM48_07930 PF07690 Major Facilitator Superfamily LXM48_07935 PF00027 Cyclic nucleotide-binding domain LXM48_07935 PF00520 Ion transport protein LXM48_07940 PF14493 Helix-turn-helix domain LXM48_07940 PF05970 PIF1-like helicase LXM48_07950 PF00465 Iron-containing alcohol dehydrogenase LXM48_07965 PF00171 Aldehyde dehydrogenase family LXM48_07970 PF13520 Amino acid permease LXM48_07975 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LXM48_07980 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LXM48_07985 PF01323 DSBA-like thioredoxin domain LXM48_07990 PF00106 short chain dehydrogenase LXM48_08000 PF00117 Glutamine amidotransferase class-I LXM48_08000 PF00958 GMP synthase C terminal domain LXM48_08000 PF02540 NAD synthase LXM48_08005 PF04264 YceI-like domain LXM48_08010 PF00583 Acetyltransferase (GNAT) family LXM48_08015 PF13737 Transposase DDE domain LXM48_08025 PF02779 Transketolase, pyrimidine binding domain LXM48_08025 PF00456 Transketolase, thiamine diphosphate binding domain LXM48_08025 PF02780 Transketolase, C-terminal domain LXM48_08030 PF02773 S-adenosylmethionine synthetase, C-terminal domain LXM48_08030 PF02772 S-adenosylmethionine synthetase, central domain LXM48_08030 PF00438 S-adenosylmethionine synthetase, N-terminal domain LXM48_08060 PF02075 Crossover junction endodeoxyribonuclease RuvC LXM48_08075 PF00202 Aminotransferase class-III LXM48_08080 PF02581 Thiamine monophosphate synthase LXM48_08115 PF00675 Insulinase (Peptidase family M16) LXM48_08115 PF05193 Peptidase M16 inactive domain LXM48_08120 PF02567 Phenazine biosynthesis-like protein LXM48_08125 PF00375 Sodium:dicarboxylate symporter family LXM48_08130 PF01613 Flavin reductase like domain LXM48_08150 PF00180 Isocitrate/isopropylmalate dehydrogenase LXM48_08155 PF00589 Phage integrase family LXM48_08155 PF13356 Arm DNA-binding domain LXM48_08165 PF08463 EcoEI R protein C-terminal LXM48_08165 PF00271 Helicase conserved C-terminal domain LXM48_08165 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LXM48_08165 PF04851 Type III restriction enzyme, res subunit LXM48_08185 PF11867 Domain of unknown function (DUF3387) LXM48_08185 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LXM48_08185 PF18766 SWI2/SNF2 ATPase LXM48_08205 PF02384 N-6 DNA Methylase LXM48_08205 PF12161 HsdM N-terminal domain LXM48_08225 PF01381 Helix-turn-helix LXM48_08250 PF02601 Exonuclease VII, large subunit LXM48_08250 PF13742 OB-fold nucleic acid binding domain LXM48_08265 PF02358 Trehalose-phosphatase LXM48_08270 PF00982 Glycosyltransferase family 20 LXM48_08275 PF07690 Major Facilitator Superfamily LXM48_08320 PF04239 Protein of unknown function (DUF421) LXM48_08325 PF06628 Catalase-related immune-responsive LXM48_08325 PF00199 Catalase LXM48_08325 PF18011 C-terminal domain found in long catalases LXM48_08355 PF07715 TonB-dependent Receptor Plug Domain LXM48_08355 PF00593 TonB dependent receptor LXM48_08370 PF01654 Cytochrome bd terminal oxidase subunit I LXM48_08375 PF02322 Cytochrome bd terminal oxidase subunit II LXM48_08395 PF00501 AMP-binding enzyme LXM48_08490 PF00665 Integrase core domain LXM48_08490 PF13936 Helix-turn-helix domain LXM48_08495 PF00753 Metallo-beta-lactamase superfamily LXM48_08495 PF14864 Alkyl sulfatase C-terminal LXM48_08495 PF14863 Alkyl sulfatase dimerisation LXM48_08515 PF00665 Integrase core domain LXM48_08515 PF13936 Helix-turn-helix domain LXM48_08535 PF00849 RNA pseudouridylate synthase LXM48_08545 PF00589 Phage integrase family LXM48_08560 PF11992 Domain of unknown function (DUF3488) LXM48_08560 PF13559 Domain of unknown function (DUF4129) LXM48_08560 PF01841 Transglutaminase-like superfamily LXM48_08570 PF07726 ATPase family associated with various cellular activities (AAA) LXM48_08570 PF17863 AAA lid domain LXM48_08580 PF04328 Selenoprotein, putative LXM48_08585 PF02554 Carbon starvation protein CstA LXM48_08585 PF13722 5TM C-terminal transporter carbon starvation CstA LXM48_08590 PF09285 Elongation factor P, C-terminal LXM48_08590 PF08207 Elongation factor P (EF-P) KOW-like domain LXM48_08590 PF01132 Elongation factor P (EF-P) OB domain LXM48_08595 PF04055 Radical SAM superfamily LXM48_08610 PF01197 Ribosomal protein L31 LXM48_08615 PF13593 SBF-like CPA transporter family (DUF4137) LXM48_08620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LXM48_08625 PF07690 Major Facilitator Superfamily LXM48_08630 PF05362 Lon protease (S16) C-terminal proteolytic domain LXM48_08630 PF13654 AAA domain LXM48_08635 PF00462 Glutaredoxin LXM48_08640 PF00202 Aminotransferase class-III LXM48_08645 PF01343 Peptidase family S49 LXM48_08645 PF08496 Peptidase family S49 N-terminal LXM48_08650 PF00005 ABC transporter LXM48_08655 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_08660 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_08665 PF12849 PBP superfamily domain LXM48_08670 PF00282 Pyridoxal-dependent decarboxylase conserved domain LXM48_08675 PF00202 Aminotransferase class-III LXM48_08685 PF00593 TonB dependent receptor LXM48_08685 PF07660 Secretin and TonB N terminus short domain LXM48_08685 PF07715 TonB-dependent Receptor Plug Domain LXM48_08690 PF01569 PAP2 superfamily LXM48_08695 PF00696 Amino acid kinase family LXM48_08695 PF01472 PUA domain LXM48_08700 PF01018 GTP1/OBG LXM48_08700 PF01926 50S ribosome-binding GTPase LXM48_08705 PF01638 HxlR-like helix-turn-helix LXM48_08710 PF05368 NmrA-like family LXM48_08730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LXM48_08730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LXM48_08735 PF00892 EamA-like transporter family LXM48_08745 PF12344 Ultra-violet resistance protein B LXM48_08745 PF02151 UvrB/uvrC motif LXM48_08745 PF17757 UvrB interaction domain LXM48_08745 PF00271 Helicase conserved C-terminal domain LXM48_08745 PF04851 Type III restriction enzyme, res subunit LXM48_08760 PF00990 Diguanylate cyclase, GGDEF domain LXM48_08760 PF08448 PAS fold LXM48_08770 PF00155 Aminotransferase class I and II LXM48_08775 PF13737 Transposase DDE domain LXM48_08780 PF00892 EamA-like transporter family LXM48_08805 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LXM48_08810 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LXM48_08815 PF02565 Recombination protein O C terminal LXM48_08815 PF11967 Recombination protein O N terminal LXM48_08825 PF07650 KH domain LXM48_08825 PF01926 50S ribosome-binding GTPase LXM48_08830 PF14622 Ribonuclease-III-like LXM48_08830 PF00035 Double-stranded RNA binding motif LXM48_08840 PF10502 Signal peptidase, peptidase S26 LXM48_08845 PF00679 Elongation factor G C-terminus LXM48_08845 PF00009 Elongation factor Tu GTP binding domain LXM48_08845 PF03144 Elongation factor Tu domain 2 LXM48_08845 PF06421 GTP-binding protein LepA C-terminus LXM48_08865 PF00313 'Cold-shock' DNA-binding domain LXM48_08880 PF00717 Peptidase S24-like LXM48_08885 PF11799 impB/mucB/samB family C-terminal domain LXM48_08885 PF11798 IMS family HHH motif LXM48_08885 PF13438 Domain of unknown function (DUF4113) LXM48_08885 PF00817 impB/mucB/samB family LXM48_08905 PF00959 Phage lysozyme LXM48_08960 PF05973 Phage derived protein Gp49-like (DUF891) LXM48_09005 PF07030 Protein of unknown function (DUF1320) LXM48_09035 PF06074 Protein of unknown function (DUF935) LXM48_09080 PF00149 Calcineurin-like phosphoesterase LXM48_09125 PF00717 Peptidase S24-like LXM48_09215 PF13180 PDZ domain LXM48_09220 PF00890 FAD binding domain LXM48_09220 PF02910 Fumarate reductase flavoprotein C-term LXM48_09230 PF02223 Thymidylate kinase LXM48_09235 PF02618 YceG-like family LXM48_09255 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_09260 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_09265 PF12857 TOBE-like domain LXM48_09265 PF00005 ABC transporter LXM48_09270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_09270 PF03466 LysR substrate binding domain LXM48_09285 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_09285 PF14602 Hexapeptide repeat of succinyl-transferase LXM48_09285 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LXM48_09290 PF04055 Radical SAM superfamily LXM48_09295 PF06508 Queuosine biosynthesis protein QueC LXM48_09310 PF00578 AhpC/TSA family LXM48_09315 PF01810 LysE type translocator LXM48_09320 PF03466 LysR substrate binding domain LXM48_09320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_09325 PF04264 YceI-like domain LXM48_09330 PF00293 NUDIX domain LXM48_09330 PF01467 Cytidylyltransferase-like LXM48_09335 PF00378 Enoyl-CoA hydratase/isomerase LXM48_09340 PF00881 Nitroreductase family LXM48_09345 PF01784 NIF3 (NGG1p interacting factor 3) LXM48_09355 PF02769 AIR synthase related protein, C-terminal domain LXM48_09355 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LXM48_09355 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LXM48_09360 PF01966 HD domain LXM48_09365 PF07499 RuvA, C-terminal domain LXM48_09365 PF01330 RuvA N terminal domain LXM48_09370 PF17864 RuvB AAA lid domain LXM48_09370 PF05491 RuvB C-terminal winged helix domain LXM48_09370 PF05496 Holliday junction DNA helicase RuvB P-loop domain LXM48_09375 PF03061 Thioesterase superfamily LXM48_09380 PF01618 MotA/TolQ/ExbB proton channel family LXM48_09385 PF02472 Biopolymer transport protein ExbD/TolR LXM48_09395 PF07676 WD40-like Beta Propeller Repeat LXM48_09395 PF04052 TolB amino-terminal domain LXM48_09400 PF00691 OmpA family LXM48_09410 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LXM48_09415 PF00588 SpoU rRNA Methylase family LXM48_09415 PF08032 RNA 2'-O ribose methyltransferase substrate binding LXM48_09445 PF11638 DnaA N-terminal domain LXM48_09445 PF00308 Bacterial dnaA protein LXM48_09445 PF08299 Bacterial dnaA protein helix-turn-helix LXM48_09450 PF01594 AI-2E family transporter LXM48_09455 PF00586 AIR synthase related protein, N-terminal domain LXM48_09455 PF02769 AIR synthase related protein, C-terminal domain LXM48_09460 PF00551 Formyl transferase LXM48_09470 PF06965 Na+/H+ antiporter 1 LXM48_09470 PF01343 Peptidase family S49 LXM48_09480 PF03772 Competence protein LXM48_09480 PF13567 Domain of unknown function (DUF4131) LXM48_09480 PF00753 Metallo-beta-lactamase superfamily LXM48_09485 PF00005 ABC transporter LXM48_09490 PF02687 FtsX-like permease family LXM48_09490 PF12704 MacB-like periplasmic core domain LXM48_09505 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LXM48_09520 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_09520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LXM48_09525 PF04055 Radical SAM superfamily LXM48_09530 PF09317 Domain of unknown function (DUF1974) LXM48_09530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LXM48_09530 PF02770 Acyl-CoA dehydrogenase, middle domain LXM48_09530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LXM48_09575 PF13613 Helix-turn-helix of DDE superfamily endonuclease LXM48_09575 PF13359 DDE superfamily endonuclease LXM48_09595 PF05221 S-adenosyl-L-homocysteine hydrolase LXM48_09595 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LXM48_09600 PF02219 Methylenetetrahydrofolate reductase LXM48_09605 PF04452 RNA methyltransferase LXM48_09610 PF00563 EAL domain LXM48_09610 PF00498 FHA domain LXM48_09610 PF00990 Diguanylate cyclase, GGDEF domain LXM48_09615 PF00390 Malic enzyme, N-terminal domain LXM48_09615 PF03949 Malic enzyme, NAD binding domain LXM48_09615 PF01515 Phosphate acetyl/butaryl transferase LXM48_09620 PF01743 Poly A polymerase head domain LXM48_09620 PF12627 Probable RNA and SrmB- binding site of polymerase A LXM48_09625 PF00152 tRNA synthetases class II (D, K and N) LXM48_09630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LXM48_09630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LXM48_09630 PF11890 Domain of unknown function (DUF3410) LXM48_09645 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_09645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LXM48_09650 PF01565 FAD binding domain LXM48_09650 PF09330 D-lactate dehydrogenase, membrane binding LXM48_09655 PF01070 FMN-dependent dehydrogenase LXM48_09660 PF07729 FCD domain LXM48_09660 PF00392 Bacterial regulatory proteins, gntR family LXM48_09665 PF02652 L-lactate permease LXM48_09670 PF00764 Arginosuccinate synthase LXM48_09675 PF00563 EAL domain LXM48_09675 PF01590 GAF domain LXM48_09675 PF00990 Diguanylate cyclase, GGDEF domain LXM48_09675 PF00360 Phytochrome region LXM48_09680 PF01979 Amidohydrolase family LXM48_09685 PF00929 Exonuclease LXM48_09705 PF00324 Amino acid permease LXM48_09730 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family LXM48_09740 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_09740 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LXM48_09745 PF00005 ABC transporter LXM48_09745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LXM48_09750 PF12911 N-terminal TM domain of oligopeptide transport permease C LXM48_09750 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_09755 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_09760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LXM48_09765 PF01476 LysM domain LXM48_09765 PF01464 Transglycosylase SLT domain LXM48_09770 PF00929 Exonuclease LXM48_09780 PF00293 NUDIX domain LXM48_09780 PF09297 NADH pyrophosphatase zinc ribbon domain LXM48_09785 PF07859 alpha/beta hydrolase fold LXM48_09790 PF04972 BON domain LXM48_09795 PF02021 Uncharacterised protein family UPF0102 LXM48_09800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LXM48_09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_09805 PF03466 LysR substrate binding domain LXM48_09810 PF01551 Peptidase family M23 LXM48_09810 PF01476 LysM domain LXM48_09815 PF01975 Survival protein SurE LXM48_09825 PF00199 Catalase LXM48_09840 PF13411 MerR HTH family regulatory protein LXM48_09860 PF07943 Penicillin-binding protein 5, C-terminal domain LXM48_09860 PF00768 D-alanyl-D-alanine carboxypeptidase LXM48_09865 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_09870 PF01066 CDP-alcohol phosphatidyltransferase LXM48_09875 PF12146 Serine aminopeptidase, S33 LXM48_09875 PF12147 Putative methyltransferase LXM48_09880 PF00782 Dual specificity phosphatase, catalytic domain LXM48_09900 PF00293 NUDIX domain LXM48_09910 PF04356 Protein of unknown function (DUF489) LXM48_09915 PF08328 Adenylosuccinate lyase C-terminal LXM48_09915 PF00206 Lyase LXM48_09930 PF01494 FAD binding domain LXM48_09935 PF01494 FAD binding domain LXM48_09945 PF00557 Metallopeptidase family M24 LXM48_09945 PF05195 Aminopeptidase P, N-terminal domain LXM48_09950 PF03695 Uncharacterised protein family (UPF0149) LXM48_09975 PF02472 Biopolymer transport protein ExbD/TolR LXM48_09980 PF01618 MotA/TolQ/ExbB proton channel family LXM48_09985 PF02333 Phytase LXM48_09995 PF00990 Diguanylate cyclase, GGDEF domain LXM48_10000 PF12833 Helix-turn-helix domain LXM48_10000 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LXM48_10010 PF00245 Alkaline phosphatase LXM48_10015 PF00245 Alkaline phosphatase LXM48_10020 PF13737 Transposase DDE domain LXM48_10025 PF00364 Biotin-requiring enzyme LXM48_10025 PF02785 Biotin carboxylase C-terminal domain LXM48_10025 PF00289 Biotin carboxylase, N-terminal domain LXM48_10025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LXM48_10035 PF07286 Protein of unknown function (DUF1445) LXM48_10040 PF03746 LamB/YcsF family LXM48_10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_10050 PF03466 LysR substrate binding domain LXM48_10065 PF13411 MerR HTH family regulatory protein LXM48_10070 PF01812 5-formyltetrahydrofolate cyclo-ligase family LXM48_10075 PF00004 ATPase family associated with various cellular activities (AAA) LXM48_10075 PF05362 Lon protease (S16) C-terminal proteolytic domain LXM48_10075 PF02190 ATP-dependent protease La (LON) substrate-binding domain LXM48_10085 PF04389 Peptidase family M28 LXM48_10090 PF02590 Predicted SPOUT methyltransferase LXM48_10095 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LXM48_10105 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LXM48_10105 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LXM48_10110 PF04060 Putative Fe-S cluster LXM48_10115 PF10576 Iron-sulfur binding domain of endonuclease III LXM48_10115 PF00633 Helix-hairpin-helix motif LXM48_10115 PF00730 HhH-GPD superfamily base excision DNA repair protein LXM48_10125 PF05191 Adenylate kinase, active site lid LXM48_10140 PF03717 Penicillin-binding Protein dimerisation domain LXM48_10140 PF00905 Penicillin binding protein transpeptidase domain LXM48_10160 PF01553 Acyltransferase LXM48_10170 PF00884 Sulfatase LXM48_10175 PF04055 Radical SAM superfamily LXM48_10175 PF13186 Iron-sulfur cluster-binding domain LXM48_10180 PF00118 TCP-1/cpn60 chaperonin family LXM48_10185 PF00166 Chaperonin 10 Kd subunit LXM48_10195 PF00781 Diacylglycerol kinase catalytic domain LXM48_10200 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LXM48_10200 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LXM48_10210 PF01266 FAD dependent oxidoreductase LXM48_10210 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LXM48_10215 PF00083 Sugar (and other) transporter LXM48_10230 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LXM48_10230 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LXM48_10255 PF00698 Acyl transferase domain LXM48_10255 PF00550 Phosphopantetheine attachment site LXM48_10255 PF14765 Polyketide synthase dehydratase LXM48_10255 PF08240 Alcohol dehydrogenase GroES-like domain LXM48_10255 PF08659 KR domain LXM48_10270 PF03551 Transcriptional regulator PadR-like family LXM48_10285 PF13361 UvrD-like helicase C-terminal domain LXM48_10285 PF00580 UvrD/REP helicase N-terminal domain LXM48_10295 PF02463 RecF/RecN/SMC N terminal domain LXM48_10300 PF00009 Elongation factor Tu GTP binding domain LXM48_10305 PF01507 Phosphoadenosine phosphosulfate reductase family LXM48_10310 PF00152 tRNA synthetases class II (D, K and N) LXM48_10310 PF01336 OB-fold nucleic acid binding domain LXM48_10320 PF00156 Phosphoribosyl transferase domain LXM48_10325 PF00301 Rubredoxin LXM48_10330 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_10330 PF18113 Rubredoxin binding C-terminal domain LXM48_10335 PF00561 alpha/beta hydrolase fold LXM48_10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_10340 PF03466 LysR substrate binding domain LXM48_10345 PF17941 Polyphosphate kinase C-terminal domain 1 LXM48_10345 PF13089 Polyphosphate kinase N-terminal domain LXM48_10345 PF02503 Polyphosphate kinase middle domain LXM48_10345 PF13090 Polyphosphate kinase C-terminal domain 2 LXM48_10350 PF00912 Transglycosylase LXM48_10355 PF01694 Rhomboid family LXM48_10365 PF00005 ABC transporter LXM48_10370 PF13472 GDSL-like Lipase/Acylhydrolase family LXM48_10375 PF00484 Carbonic anhydrase LXM48_10380 PF00561 alpha/beta hydrolase fold LXM48_10390 PF07715 TonB-dependent Receptor Plug Domain LXM48_10390 PF00593 TonB dependent receptor LXM48_10395 PF01521 Iron-sulphur cluster biosynthesis LXM48_10395 PF01106 NifU-like domain LXM48_10415 PF01384 Phosphate transporter family LXM48_10420 PF02310 B12 binding domain LXM48_10420 PF00809 Pterin binding enzyme LXM48_10420 PF02574 Homocysteine S-methyltransferase LXM48_10420 PF02965 Vitamin B12 dependent methionine synthase, activation domain LXM48_10420 PF02607 B12 binding domain LXM48_10430 PF07690 Major Facilitator Superfamily LXM48_10435 PF02311 AraC-like ligand binding domain LXM48_10435 PF12833 Helix-turn-helix domain LXM48_10440 PF01327 Polypeptide deformylase LXM48_10445 PF00083 Sugar (and other) transporter LXM48_10445 PF08946 Osmosensory transporter coiled coil LXM48_10460 PF04973 Nicotinamide mononucleotide transporter LXM48_10465 PF00378 Enoyl-CoA hydratase/isomerase LXM48_10490 PF00990 Diguanylate cyclase, GGDEF domain LXM48_10495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LXM48_10500 PF07152 YaeQ protein LXM48_10505 PF07683 Cobalamin synthesis protein cobW C-terminal domain LXM48_10505 PF02492 CobW/HypB/UreG, nucleotide-binding domain LXM48_10515 PF03061 Thioesterase superfamily LXM48_10520 PF01734 Patatin-like phospholipase LXM48_10525 PF02417 Chromate transporter LXM48_10530 PF01235 Sodium:alanine symporter family LXM48_10535 PF03616 Sodium/glutamate symporter LXM48_10550 PF07690 Major Facilitator Superfamily LXM48_10560 PF12805 FUSC-like inner membrane protein yccS LXM48_10570 PF00667 FAD binding domain LXM48_10570 PF00258 Flavodoxin LXM48_10570 PF00175 Oxidoreductase NAD-binding domain LXM48_10640 PF04304 Protein of unknown function (DUF454) LXM48_10655 PF07687 Peptidase dimerisation domain LXM48_10655 PF01546 Peptidase family M20/M25/M40 LXM48_10665 PF02895 Signal transducing histidine kinase, homodimeric domain LXM48_10665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_10665 PF01627 Hpt domain LXM48_10665 PF00072 Response regulator receiver domain LXM48_10665 PF01584 CheW-like domain LXM48_10670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LXM48_10670 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LXM48_10675 PF01584 CheW-like domain LXM48_10680 PF00072 Response regulator receiver domain LXM48_10685 PF00072 Response regulator receiver domain LXM48_10700 PF00873 AcrB/AcrD/AcrF family LXM48_10705 PF04073 Aminoacyl-tRNA editing domain LXM48_10705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LXM48_10705 PF03129 Anticodon binding domain LXM48_10730 PF00692 dUTPase LXM48_10740 PF16868 NMT1-like family LXM48_10755 PF10609 NUBPL iron-transfer P-loop NTPase LXM48_10775 PF01588 Putative tRNA binding domain LXM48_10775 PF09334 tRNA synthetases class I (M) LXM48_10780 PF13737 Transposase DDE domain LXM48_10785 PF03783 Curli production assembly/transport component CsgG LXM48_10795 PF06100 MCRA family LXM48_10820 PF13533 Biotin-lipoyl like LXM48_10825 PF00291 Pyridoxal-phosphate dependent enzyme LXM48_10845 PF05552 Conserved TM helix LXM48_10860 PF00497 Bacterial extracellular solute-binding proteins, family 3 LXM48_10865 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_10870 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_10875 PF00005 ABC transporter LXM48_10880 PF00194 Eukaryotic-type carbonic anhydrase LXM48_10885 PF00909 Ammonium Transporter Family LXM48_10900 PF08521 Two-component sensor kinase N-terminal LXM48_10900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_10900 PF00512 His Kinase A (phospho-acceptor) domain LXM48_10905 PF00486 Transcriptional regulatory protein, C terminal LXM48_10905 PF00072 Response regulator receiver domain LXM48_10910 PF00884 Sulfatase LXM48_10910 PF08019 Phosphoethanolamine transferase EptA/EptB LXM48_10930 PF01734 Patatin-like phospholipase LXM48_10940 PF01145 SPFH domain / Band 7 family LXM48_10945 PF00348 Polyprenyl synthetase LXM48_10950 PF04303 PrpF protein LXM48_10955 PF00324 Amino acid permease LXM48_10970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LXM48_10975 PF00324 Amino acid permease LXM48_10980 PF00155 Aminotransferase class I and II LXM48_10995 PF02798 Glutathione S-transferase, N-terminal domain LXM48_10995 PF14497 Glutathione S-transferase, C-terminal domain LXM48_11010 PF03358 NADPH-dependent FMN reductase LXM48_11015 PF01758 Sodium Bile acid symporter family LXM48_11025 PF01022 Bacterial regulatory protein, arsR family LXM48_11030 PF03960 ArsC family LXM48_11035 PF05199 GMC oxidoreductase LXM48_11040 PF00171 Aldehyde dehydrogenase family LXM48_11045 PF12833 Helix-turn-helix domain LXM48_11045 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LXM48_11070 PF01507 Phosphoadenosine phosphosulfate reductase family LXM48_11075 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LXM48_11075 PF06974 Protein of unknown function (DUF1298) LXM48_11085 PF00575 S1 RNA binding domain LXM48_11085 PF10150 Ribonuclease E/G family LXM48_11090 PF02545 Maf-like protein LXM48_11095 PF04093 rod shape-determining protein MreD LXM48_11100 PF04085 rod shape-determining protein MreC LXM48_11110 PF02686 Glu-tRNAGln amidotransferase C subunit LXM48_11115 PF01425 Amidase LXM48_11120 PF02637 GatB domain LXM48_11120 PF02934 GatB/GatE catalytic domain LXM48_11155 PF05992 SbmA/BacA-like family LXM48_11175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_11175 PF03466 LysR substrate binding domain LXM48_11180 PF01144 Coenzyme A transferase LXM48_11185 PF01144 Coenzyme A transferase LXM48_11195 PF07715 TonB-dependent Receptor Plug Domain LXM48_11195 PF00593 TonB dependent receptor LXM48_11215 PF02322 Cytochrome bd terminal oxidase subunit II LXM48_11225 PF00155 Aminotransferase class I and II LXM48_11225 PF00392 Bacterial regulatory proteins, gntR family LXM48_11235 PF04172 LrgB-like family LXM48_11255 PF13737 Transposase DDE domain LXM48_11265 PF00107 Zinc-binding dehydrogenase LXM48_11265 PF16884 N-terminal domain of oxidoreductase LXM48_11270 PF00440 Bacterial regulatory proteins, tetR family LXM48_11270 PF16925 Tetracyclin repressor-like, C-terminal domain LXM48_11280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LXM48_11290 PF00465 Iron-containing alcohol dehydrogenase LXM48_11300 PF00756 Putative esterase LXM48_11305 PF00107 Zinc-binding dehydrogenase LXM48_11305 PF08240 Alcohol dehydrogenase GroES-like domain LXM48_11310 PF02583 Metal-sensitive transcriptional repressor LXM48_11320 PF00999 Sodium/hydrogen exchanger family LXM48_11320 PF02254 TrkA-N domain LXM48_11325 PF08240 Alcohol dehydrogenase GroES-like domain LXM48_11325 PF16197 Ketoacyl-synthetase C-terminal extension LXM48_11325 PF00109 Beta-ketoacyl synthase, N-terminal domain LXM48_11325 PF08659 KR domain LXM48_11325 PF00698 Acyl transferase domain LXM48_11325 PF14765 Polyketide synthase dehydratase LXM48_11325 PF00550 Phosphopantetheine attachment site LXM48_11325 PF02801 Beta-ketoacyl synthase, C-terminal domain LXM48_11330 PF08240 Alcohol dehydrogenase GroES-like domain LXM48_11330 PF00107 Zinc-binding dehydrogenase LXM48_11335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_11335 PF03466 LysR substrate binding domain LXM48_11340 PF00106 short chain dehydrogenase LXM48_11345 PF08240 Alcohol dehydrogenase GroES-like domain LXM48_11345 PF00107 Zinc-binding dehydrogenase LXM48_11370 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LXM48_11395 PF00665 Integrase core domain LXM48_11395 PF13936 Helix-turn-helix domain LXM48_11435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LXM48_11435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LXM48_11440 PF07690 Major Facilitator Superfamily LXM48_11445 PF00529 HlyD membrane-fusion protein of T1SS LXM48_11445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LXM48_11450 PF03061 Thioesterase superfamily LXM48_11455 PF00490 Delta-aminolevulinic acid dehydratase LXM48_11460 PF01266 FAD dependent oxidoreductase LXM48_11465 PF01370 NAD dependent epimerase/dehydratase family LXM48_11465 PF08338 Domain of unknown function (DUF1731) LXM48_11475 PF00563 EAL domain LXM48_11475 PF01590 GAF domain LXM48_11475 PF00990 Diguanylate cyclase, GGDEF domain LXM48_11475 PF00360 Phytochrome region LXM48_11480 PF12320 Type 5 capsule protein repressor C-terminal domain LXM48_11480 PF00149 Calcineurin-like phosphoesterase LXM48_11495 PF01168 Alanine racemase, N-terminal domain LXM48_11500 PF00437 Type II/IV secretion system protein LXM48_11505 PF00437 Type II/IV secretion system protein LXM48_11510 PF01475 Ferric uptake regulator family LXM48_11515 PF04355 SmpA / OmlA family LXM48_11520 PF03658 RnfH family Ubiquitin LXM48_11530 PF01814 Hemerythrin HHE cation binding domain LXM48_11535 PF13230 Glutamine amidotransferases class-II LXM48_11540 PF00696 Amino acid kinase family LXM48_11545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LXM48_11545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LXM48_11545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LXM48_11545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LXM48_11550 PF00692 dUTPase LXM48_11555 PF00580 UvrD/REP helicase N-terminal domain LXM48_11555 PF13361 UvrD-like helicase C-terminal domain LXM48_11560 PF13488 Glycine zipper LXM48_11560 PF00691 OmpA family LXM48_11565 PF01553 Acyltransferase LXM48_11575 PF03775 Septum formation inhibitor MinC, C-terminal domain LXM48_11580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LXM48_11585 PF03776 Septum formation topological specificity factor MinE LXM48_11600 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LXM48_11600 PF17854 FtsK alpha domain LXM48_11600 PF09397 Ftsk gamma domain LXM48_11600 PF01580 FtsK/SpoIIIE family LXM48_11605 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_11610 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LXM48_11615 PF04377 Arginine-tRNA-protein transferase, C terminus LXM48_11615 PF04376 Arginine-tRNA-protein transferase, N terminus LXM48_11620 PF00583 Acetyltransferase (GNAT) family LXM48_11630 PF00009 Elongation factor Tu GTP binding domain LXM48_11630 PF03144 Elongation factor Tu domain 2 LXM48_11630 PF03143 Elongation factor Tu C-terminal domain LXM48_11635 PF00679 Elongation factor G C-terminus LXM48_11635 PF14492 Elongation Factor G, domain II LXM48_11635 PF03764 Elongation factor G, domain IV LXM48_11635 PF00009 Elongation factor Tu GTP binding domain LXM48_11635 PF03144 Elongation factor Tu domain 2 LXM48_11640 PF00177 Ribosomal protein S7p/S5e LXM48_11645 PF00164 Ribosomal protein S12/S23 LXM48_11655 PF00109 Beta-ketoacyl synthase, N-terminal domain LXM48_11655 PF02801 Beta-ketoacyl synthase, C-terminal domain LXM48_11660 PF03653 Uncharacterised protein family (UPF0093) LXM48_11670 PF00324 Amino acid permease LXM48_11675 PF01042 Endoribonuclease L-PSP LXM48_11680 PF00842 Alanine racemase, C-terminal domain LXM48_11680 PF01168 Alanine racemase, N-terminal domain LXM48_11685 PF01266 FAD dependent oxidoreductase LXM48_11690 PF01037 Lrp/AsnC ligand binding domain LXM48_11700 PF13419 Haloacid dehalogenase-like hydrolase LXM48_11705 PF08543 Phosphomethylpyrimidine kinase LXM48_11705 PF02581 Thiamine monophosphate synthase LXM48_11705 PF03070 TENA/THI-4/PQQC family LXM48_11710 PF08378 Nuclease-related domain LXM48_11715 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LXM48_11715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LXM48_11720 PF00893 Small Multidrug Resistance protein LXM48_11725 PF00893 Small Multidrug Resistance protein LXM48_11740 PF00394 Multicopper oxidase LXM48_11740 PF07731 Multicopper oxidase LXM48_11740 PF07732 Multicopper oxidase LXM48_11750 PF00834 Ribulose-phosphate 3 epimerase family LXM48_11770 PF00756 Putative esterase LXM48_11780 PF04445 Putative SAM-dependent methyltransferase LXM48_11785 PF02673 Bacitracin resistance protein BacA LXM48_11790 PF00814 Glycoprotease family LXM48_11795 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_11800 PF00293 NUDIX domain LXM48_11840 PF04715 Anthranilate synthase component I, N terminal region LXM48_11840 PF00425 chorismate binding enzyme LXM48_11845 PF00155 Aminotransferase class I and II LXM48_11850 PF00815 Histidinol dehydrogenase LXM48_11860 PF01634 ATP phosphoribosyltransferase LXM48_11865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LXM48_11870 PF01722 BolA-like protein LXM48_11875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LXM48_11880 PF00309 Sigma-54 factor, Activator interacting domain (AID) LXM48_11880 PF04963 Sigma-54 factor, core binding domain LXM48_11880 PF04552 Sigma-54, DNA binding domain LXM48_11930 PF04333 MlaA lipoprotein LXM48_11935 PF13426 PAS domain LXM48_11935 PF07228 Stage II sporulation protein E (SpoIIE) LXM48_11945 PF00795 Carbon-nitrogen hydrolase LXM48_11955 PF02566 OsmC-like protein LXM48_11965 PF00437 Type II/IV secretion system protein LXM48_11985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LXM48_11985 PF01612 3'-5' exonuclease LXM48_11985 PF01367 5'-3' exonuclease, C-terminal SAM fold LXM48_11985 PF00476 DNA polymerase family A LXM48_11990 PF02325 YGGT family LXM48_11995 PF03807 NADP oxidoreductase coenzyme F420-dependent LXM48_11995 PF14748 Pyrroline-5-carboxylate reductase dimerisation LXM48_12000 PF09179 TilS substrate binding domain LXM48_12000 PF11734 TilS substrate C-terminal domain LXM48_12000 PF01171 PP-loop family LXM48_12005 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LXM48_12010 PF02541 Ppx/GppA phosphatase family LXM48_12015 PF00085 Thioredoxin LXM48_12020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LXM48_12020 PF07498 Rho termination factor, N-terminal domain LXM48_12020 PF07497 Rho termination factor, RNA-binding domain LXM48_12030 PF00216 Bacterial DNA-binding protein LXM48_12035 PF03483 B3/4 domain LXM48_12035 PF03484 tRNA synthetase B5 domain LXM48_12035 PF03147 Ferredoxin-fold anticodon binding domain LXM48_12035 PF01588 Putative tRNA binding domain LXM48_12035 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LXM48_12040 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LXM48_12040 PF01409 tRNA synthetases class II core domain (F) LXM48_12065 PF00453 Ribosomal protein L20 LXM48_12070 PF01632 Ribosomal protein L35 LXM48_12085 PF09335 SNARE associated Golgi protein LXM48_12095 PF00043 Glutathione S-transferase, C-terminal domain LXM48_12095 PF02798 Glutathione S-transferase, N-terminal domain LXM48_12100 PF00011 Hsp20/alpha crystallin family LXM48_12105 PF00707 Translation initiation factor IF-3, C-terminal domain LXM48_12105 PF05198 Translation initiation factor IF-3, N-terminal domain LXM48_12110 PF03129 Anticodon binding domain LXM48_12110 PF02824 TGS domain LXM48_12110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LXM48_12110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LXM48_12115 PF13193 AMP-binding enzyme C-terminal domain LXM48_12115 PF00501 AMP-binding enzyme LXM48_12120 PF04751 Protein of unknown function (DUF615) LXM48_12125 PF00381 PTS HPr component phosphorylation site LXM48_12130 PF03668 P-loop ATPase protein family LXM48_12135 PF02569 Pantoate-beta-alanine ligase LXM48_12140 PF02548 Ketopantoate hydroxymethyltransferase LXM48_12145 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LXM48_12150 PF01743 Poly A polymerase head domain LXM48_12150 PF12626 Polymerase A arginine-rich C-terminus LXM48_12150 PF12627 Probable RNA and SrmB- binding site of polymerase A LXM48_12160 PF03819 MazG nucleotide pyrophosphohydrolase domain LXM48_12170 PF04607 Region found in RelA / SpoT proteins LXM48_12170 PF13291 ACT domain LXM48_12170 PF02824 TGS domain LXM48_12175 PF05958 tRNA (Uracil-5-)-methyltransferase LXM48_12185 PF00291 Pyridoxal-phosphate dependent enzyme LXM48_12190 PF00672 HAMP domain LXM48_12190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_12190 PF00512 His Kinase A (phospho-acceptor) domain LXM48_12190 PF01627 Hpt domain LXM48_12190 PF00072 Response regulator receiver domain LXM48_12190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LXM48_12195 PF00378 Enoyl-CoA hydratase/isomerase LXM48_12200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LXM48_12200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LXM48_12205 PF01261 Xylose isomerase-like TIM barrel LXM48_12220 PF00909 Ammonium Transporter Family LXM48_12220 PF00672 HAMP domain LXM48_12230 PF02233 NAD(P) transhydrogenase beta subunit LXM48_12235 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LXM48_12240 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LXM48_12240 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LXM48_12245 PF07690 Major Facilitator Superfamily LXM48_12260 PF02311 AraC-like ligand binding domain LXM48_12260 PF12833 Helix-turn-helix domain LXM48_12265 PF01625 Peptide methionine sulfoxide reductase LXM48_12270 PF00462 Glutaredoxin LXM48_12275 PF01641 SelR domain LXM48_12285 PF01625 Peptide methionine sulfoxide reductase LXM48_12290 PF00990 Diguanylate cyclase, GGDEF domain LXM48_12305 PF01625 Peptide methionine sulfoxide reductase LXM48_12330 PF11867 Domain of unknown function (DUF3387) LXM48_12330 PF18766 SWI2/SNF2 ATPase LXM48_12330 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LXM48_12350 PF13936 Helix-turn-helix domain LXM48_12350 PF00665 Integrase core domain LXM48_12355 PF01420 Type I restriction modification DNA specificity domain LXM48_12360 PF13749 Putative ATP-dependent DNA helicase recG C-terminal LXM48_12360 PF17191 RecG wedge domain LXM48_12360 PF00270 DEAD/DEAH box helicase LXM48_12365 PF02384 N-6 DNA Methylase LXM48_12380 PF00120 Glutamine synthetase, catalytic domain LXM48_12390 PF00072 Response regulator receiver domain LXM48_12390 PF00486 Transcriptional regulatory protein, C terminal LXM48_12395 PF02702 Osmosensitive K+ channel His kinase sensor domain LXM48_12395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_12395 PF13492 GAF domain LXM48_12395 PF13493 Domain of unknown function (DUF4118) LXM48_12395 PF00512 His Kinase A (phospho-acceptor) domain LXM48_12400 PF02669 K+-transporting ATPase, c chain LXM48_12410 PF03814 Potassium-transporting ATPase A subunit LXM48_12485 PF00589 Phage integrase family LXM48_12490 PF01207 Dihydrouridine synthase (Dus) LXM48_12505 PF00899 ThiF family LXM48_12510 PF00330 Aconitase family (aconitate hydratase) LXM48_12510 PF00694 Aconitase C-terminal domain LXM48_12515 PF01026 TatD related DNase LXM48_12530 PF16658 Class II release factor RF3, C-terminal domain LXM48_12530 PF00009 Elongation factor Tu GTP binding domain LXM48_12530 PF03144 Elongation factor Tu domain 2 LXM48_12540 PF00563 EAL domain LXM48_12540 PF00990 Diguanylate cyclase, GGDEF domain LXM48_12540 PF03707 Bacterial signalling protein N terminal repeat LXM48_12545 PF11818 C-terminal domain of tail specific protease (DUF3340) LXM48_12545 PF00595 PDZ domain LXM48_12545 PF03572 Peptidase family S41 LXM48_12545 PF17804 Tail specific protease N-terminal domain LXM48_12550 PF00933 Glycosyl hydrolase family 3 N terminal domain LXM48_12565 PF00171 Aldehyde dehydrogenase family LXM48_12570 PF00871 Acetokinase family LXM48_12575 PF01515 Phosphate acetyl/butaryl transferase LXM48_12575 PF07085 DRTGG domain LXM48_12595 PF05163 DinB family LXM48_12615 PF05681 Fumarate hydratase (Fumerase) LXM48_12615 PF05683 Fumarase C-terminus LXM48_12630 PF07724 AAA domain (Cdc48 subfamily) LXM48_12630 PF10431 C-terminal, D2-small domain, of ClpB protein LXM48_12630 PF06689 ClpX C4-type zinc finger LXM48_12635 PF00574 Clp protease LXM48_12640 PF05698 Bacterial trigger factor protein (TF) C-terminus LXM48_12640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LXM48_12640 PF05697 Bacterial trigger factor protein (TF) LXM48_12645 PF00593 TonB dependent receptor LXM48_12645 PF07715 TonB-dependent Receptor Plug Domain LXM48_12650 PF07715 TonB-dependent Receptor Plug Domain LXM48_12650 PF00593 TonB dependent receptor LXM48_12655 PF18331 PKHD-type hydroxylase C-terminal domain LXM48_12655 PF13640 2OG-Fe(II) oxygenase superfamily LXM48_12660 PF01070 FMN-dependent dehydrogenase LXM48_12665 PF00682 HMGL-like LXM48_12665 PF08502 LeuA allosteric (dimerisation) domain LXM48_12670 PF00561 alpha/beta hydrolase fold LXM48_12675 PF07021 Methionine biosynthesis protein MetW LXM48_12675 PF00561 alpha/beta hydrolase fold LXM48_12685 PF01725 Ham1 family LXM48_12695 PF02416 mttA/Hcf106 family LXM48_12700 PF02416 mttA/Hcf106 family LXM48_12705 PF00902 Sec-independent protein translocase protein (TatC) LXM48_12720 PF01790 Prolipoprotein diacylglyceryl transferase LXM48_12740 PF00303 Thymidylate synthase LXM48_12745 PF00186 Dihydrofolate reductase LXM48_12760 PF01625 Peptide methionine sulfoxide reductase LXM48_12770 PF01618 MotA/TolQ/ExbB proton channel family LXM48_12780 PF01842 ACT domain LXM48_12780 PF00551 Formyl transferase LXM48_12790 PF00171 Aldehyde dehydrogenase family LXM48_12795 PF00830 Ribosomal L28 family LXM48_12800 PF00471 Ribosomal protein L33 LXM48_12805 PF00999 Sodium/hydrogen exchanger family LXM48_12805 PF02254 TrkA-N domain LXM48_12830 PF00580 UvrD/REP helicase N-terminal domain LXM48_12830 PF13361 UvrD-like helicase C-terminal domain LXM48_12835 PF02595 Glycerate kinase family LXM48_12860 PF08272 Topoisomerase I zinc-ribbon-like LXM48_12860 PF01131 DNA topoisomerase LXM48_12860 PF01751 Toprim domain LXM48_12860 PF01396 Topoisomerase DNA binding C4 zinc finger LXM48_12875 PF04102 SlyX LXM48_12880 PF12848 ABC transporter LXM48_12880 PF16326 ABC transporter C-terminal domain LXM48_12880 PF00005 ABC transporter LXM48_12885 PF03279 Bacterial lipid A biosynthesis acyltransferase LXM48_12895 PF01118 Semialdehyde dehydrogenase, NAD binding domain LXM48_12895 PF02774 Semialdehyde dehydrogenase, dimerisation domain LXM48_12915 PF01416 tRNA pseudouridine synthase LXM48_12925 PF01176 Translation initiation factor 1A / IF-1 LXM48_12940 PF00180 Isocitrate/isopropylmalate dehydrogenase LXM48_12950 PF00694 Aconitase C-terminal domain LXM48_12955 PF00330 Aconitase family (aconitate hydratase) LXM48_12965 PF03466 LysR substrate binding domain LXM48_12965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_12985 PF00293 NUDIX domain LXM48_12990 PF01590 GAF domain LXM48_12990 PF05524 PEP-utilising enzyme, N-terminal LXM48_12990 PF00391 PEP-utilising enzyme, mobile domain LXM48_12990 PF02896 PEP-utilising enzyme, TIM barrel domain LXM48_13000 PF01810 LysE type translocator LXM48_13010 PF13737 Transposase DDE domain LXM48_13020 PF00141 Peroxidase LXM48_13025 PF12706 Beta-lactamase superfamily domain LXM48_13030 PF16916 Dimerisation domain of Zinc Transporter LXM48_13030 PF01545 Cation efflux family LXM48_13035 PF03466 LysR substrate binding domain LXM48_13035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_13050 PF01479 S4 domain LXM48_13050 PF00849 RNA pseudouridylate synthase LXM48_13055 PF10150 Ribonuclease E/G family LXM48_13055 PF00575 S1 RNA binding domain LXM48_13055 PF12111 Polyribonucleotide phosphorylase C terminal LXM48_13060 PF00501 AMP-binding enzyme LXM48_13060 PF13193 AMP-binding enzyme C-terminal domain LXM48_13085 PF04024 PspC domain LXM48_13100 PF02091 Glycyl-tRNA synthetase alpha subunit LXM48_13105 PF05746 DALR anticodon binding domain LXM48_13105 PF02092 Glycyl-tRNA synthetase beta subunit LXM48_13140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LXM48_13140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LXM48_13155 PF01209 ubiE/COQ5 methyltransferase family LXM48_13170 PF13247 4Fe-4S dicluster domain LXM48_13170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LXM48_13170 PF07992 Pyridine nucleotide-disulphide oxidoreductase LXM48_13180 PF03884 DNA gyrase inhibitor YacG LXM48_13190 PF00753 Metallo-beta-lactamase superfamily LXM48_13195 PF00762 Ferrochelatase LXM48_13205 PF01177 Asp/Glu/Hydantoin racemase LXM48_13235 PF01206 Sulfurtransferase TusA LXM48_13240 PF00571 CBS domain LXM48_13240 PF03471 Transporter associated domain LXM48_13245 PF00795 Carbon-nitrogen hydrolase LXM48_13250 PF01588 Putative tRNA binding domain LXM48_13260 PF07963 Prokaryotic N-terminal methylation motif LXM48_13260 PF08334 Type II secretion system (T2SS), protein G LXM48_13265 PF00482 Type II secretion system (T2SS), protein F LXM48_13270 PF00271 Helicase conserved C-terminal domain LXM48_13270 PF17764 3′ DNA-binding domain (3′BD) LXM48_13270 PF18074 Primosomal protein N C-terminal domain LXM48_13270 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LXM48_13270 PF00270 DEAD/DEAH box helicase LXM48_13275 PF00999 Sodium/hydrogen exchanger family LXM48_13275 PF02254 TrkA-N domain LXM48_13280 PF01430 Hsp33 protein LXM48_13290 PF00226 DnaJ domain LXM48_13290 PF01556 DnaJ C terminal domain LXM48_13300 PF04325 Protein of unknown function (DUF465) LXM48_13305 PF01544 CorA-like Mg2+ transporter protein LXM48_13310 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LXM48_13310 PF00013 KH domain LXM48_13310 PF03725 3' exoribonuclease family, domain 2 LXM48_13310 PF00575 S1 RNA binding domain LXM48_13310 PF01138 3' exoribonuclease family, domain 1 LXM48_13315 PF00312 Ribosomal protein S15 LXM48_13320 PF00144 Beta-lactamase LXM48_13325 PF13538 UvrD-like helicase C-terminal domain LXM48_13330 PF12705 PD-(D/E)XK nuclease superfamily LXM48_13330 PF00580 UvrD/REP helicase N-terminal domain LXM48_13330 PF13361 UvrD-like helicase C-terminal domain LXM48_13335 PF17946 RecC C-terminal domain LXM48_13345 PF03976 Polyphosphate kinase 2 (PPK2) LXM48_13355 PF01209 ubiE/COQ5 methyltransferase family LXM48_13365 PF03109 ABC1 family LXM48_13375 PF01494 FAD binding domain LXM48_13380 PF01502 Phosphoribosyl-AMP cyclohydrolase LXM48_13390 PF02463 RecF/RecN/SMC N terminal domain LXM48_13395 PF13244 Domain of unknown function (DUF4040) LXM48_13395 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LXM48_13395 PF00361 Proton-conducting membrane transporter LXM48_13395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LXM48_13400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LXM48_13405 PF00361 Proton-conducting membrane transporter LXM48_13410 PF01899 Na+/H+ ion antiporter subunit LXM48_13415 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LXM48_13420 PF03334 Na+/H+ antiporter subunit LXM48_13425 PF02033 Ribosome-binding factor A LXM48_13430 PF00009 Elongation factor Tu GTP binding domain LXM48_13430 PF11987 Translation-initiation factor 2 LXM48_13430 PF08364 Bacterial translation initiation factor IF-2 associated region LXM48_13430 PF04760 Translation initiation factor IF-2, N-terminal region LXM48_13435 PF13184 NusA-like KH domain LXM48_13435 PF08529 NusA N-terminal domain LXM48_13435 PF00575 S1 RNA binding domain LXM48_13440 PF02576 RimP N-terminal domain LXM48_13440 PF17384 RimP C-terminal SH3 domain LXM48_13470 PF03840 Preprotein translocase SecG subunit LXM48_13475 PF00121 Triosephosphate isomerase LXM48_13480 PF00437 Type II/IV secretion system protein LXM48_13480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LXM48_13485 PF00482 Type II secretion system (T2SS), protein F LXM48_13490 PF06750 Bacterial Peptidase A24 N-terminal domain LXM48_13490 PF01478 Type IV leader peptidase family LXM48_13495 PF01121 Dephospho-CoA kinase LXM48_13505 PF08032 RNA 2'-O ribose methyltransferase substrate binding LXM48_13505 PF00588 SpoU rRNA Methylase family LXM48_13510 PF06865 Pyrimidine/purine nucleoside phosphorylase LXM48_13515 PF02463 RecF/RecN/SMC N terminal domain LXM48_13520 PF02622 Uncharacterized ACR, COG1678 LXM48_13525 PF03652 Holliday junction resolvase LXM48_13530 PF13533 Biotin-lipoyl like LXM48_13540 PF04632 Fusaric acid resistance protein family LXM48_13555 PF00664 ABC transporter transmembrane region LXM48_13555 PF00005 ABC transporter LXM48_13560 PF01066 CDP-alcohol phosphatidyltransferase LXM48_13570 PF01541 GIY-YIG catalytic domain LXM48_13570 PF02151 UvrB/uvrC motif LXM48_13570 PF08459 UvrC Helix-hairpin-helix N-terminal LXM48_13590 PF00378 Enoyl-CoA hydratase/isomerase LXM48_13590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LXM48_13590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LXM48_13595 PF02803 Thiolase, C-terminal domain LXM48_13595 PF00108 Thiolase, N-terminal domain LXM48_13610 PF09313 Domain of unknown function (DUF1971) LXM48_13610 PF03848 Tellurite resistance protein TehB LXM48_13635 PF01323 DSBA-like thioredoxin domain LXM48_13665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_13665 PF00183 Hsp90 protein LXM48_13675 PF03922 OmpW family LXM48_13680 PF03553 Na+/H+ antiporter family LXM48_13680 PF13726 Na+-H+ antiporter family LXM48_13705 PF00623 RNA polymerase Rpb1, domain 2 LXM48_13705 PF04998 RNA polymerase Rpb1, domain 5 LXM48_13705 PF04997 RNA polymerase Rpb1, domain 1 LXM48_13705 PF04983 RNA polymerase Rpb1, domain 3 LXM48_13705 PF05000 RNA polymerase Rpb1, domain 4 LXM48_13710 PF04563 RNA polymerase beta subunit LXM48_13710 PF04561 RNA polymerase Rpb2, domain 2 LXM48_13710 PF04565 RNA polymerase Rpb2, domain 3 LXM48_13710 PF10385 RNA polymerase beta subunit external 1 domain LXM48_13710 PF00562 RNA polymerase Rpb2, domain 6 LXM48_13710 PF04560 RNA polymerase Rpb2, domain 7 LXM48_13715 PF00542 Ribosomal protein L7/L12 C-terminal domain LXM48_13715 PF16320 Ribosomal protein L7/L12 dimerisation domain LXM48_13720 PF00466 Ribosomal protein L10 LXM48_13725 PF00687 Ribosomal protein L1p/L10e family LXM48_13730 PF00298 Ribosomal protein L11, RNA binding domain LXM48_13730 PF03946 Ribosomal protein L11, N-terminal domain LXM48_13735 PF00467 KOW motif LXM48_13735 PF02357 Transcription termination factor nusG LXM48_13740 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LXM48_13750 PF03143 Elongation factor Tu C-terminal domain LXM48_13750 PF00009 Elongation factor Tu GTP binding domain LXM48_13750 PF03144 Elongation factor Tu domain 2 LXM48_13775 PF04715 Anthranilate synthase component I, N terminal region LXM48_13775 PF00425 chorismate binding enzyme LXM48_13780 PF13419 Haloacid dehalogenase-like hydrolase LXM48_13785 PF16697 Inner membrane component of T3SS, cytoplasmic domain LXM48_13790 PF00263 Bacterial type II and III secretion system protein LXM48_13790 PF03958 Bacterial type II/III secretion system short domain LXM48_13795 PF11356 Type II secretion system protein C LXM48_13805 PF00816 H-NS histone family LXM48_13810 PF03061 Thioesterase superfamily LXM48_13830 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LXM48_13830 PF03900 Porphobilinogen deaminase, C-terminal domain LXM48_13835 PF04397 LytTr DNA-binding domain LXM48_13835 PF00072 Response regulator receiver domain LXM48_13840 PF07694 5TMR of 5TMR-LYT LXM48_13840 PF06580 Histidine kinase LXM48_13840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_13845 PF00206 Lyase LXM48_13845 PF14698 Argininosuccinate lyase C-terminal LXM48_13850 PF04362 Bacterial Fe(2+) trafficking LXM48_13855 PF01895 PhoU domain LXM48_13860 PF02321 Outer membrane efflux protein LXM48_13870 PF13667 ThiC-associated domain LXM48_13870 PF01964 Radical SAM ThiC family LXM48_13875 PF00293 NUDIX domain LXM48_13880 PF00149 Calcineurin-like phosphoesterase LXM48_13885 PF01258 Prokaryotic dksA/traR C4-type zinc finger LXM48_13890 PF00749 tRNA synthetases class I (E and Q), catalytic domain LXM48_13895 PF01098 Cell cycle protein LXM48_13900 PF02875 Mur ligase family, glutamate ligase domain LXM48_13900 PF08245 Mur ligase middle domain LXM48_13910 PF07664 Ferrous iron transport protein B C terminus LXM48_13910 PF07670 Nucleoside recognition LXM48_13910 PF02421 Ferrous iron transport protein B LXM48_13920 PF02899 Phage integrase, N-terminal SAM-like domain LXM48_13920 PF00589 Phage integrase family LXM48_13925 PF10411 Disulfide bond isomerase protein N-terminus LXM48_13925 PF13098 Thioredoxin-like domain LXM48_13930 PF00742 Homoserine dehydrogenase LXM48_13930 PF03447 Homoserine dehydrogenase, NAD binding domain LXM48_13930 PF01842 ACT domain LXM48_13935 PF00291 Pyridoxal-phosphate dependent enzyme LXM48_13940 PF00768 D-alanyl-D-alanine carboxypeptidase LXM48_13945 PF00196 Bacterial regulatory proteins, luxR family LXM48_13945 PF00072 Response regulator receiver domain LXM48_13950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_13950 PF00512 His Kinase A (phospho-acceptor) domain LXM48_13955 PF02954 Bacterial regulatory protein, Fis family LXM48_13955 PF00072 Response regulator receiver domain LXM48_13955 PF00158 Sigma-54 interaction domain LXM48_13960 PF00595 PDZ domain LXM48_13960 PF03572 Peptidase family S41 LXM48_13965 PF01676 Metalloenzyme superfamily LXM48_13965 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LXM48_13970 PF03739 Lipopolysaccharide export system permease LptF/LptG LXM48_13975 PF03739 Lipopolysaccharide export system permease LptF/LptG LXM48_13980 PF00883 Cytosol aminopeptidase family, catalytic domain LXM48_13980 PF02789 Cytosol aminopeptidase family, N-terminal domain LXM48_13995 PF09335 SNARE associated Golgi protein LXM48_14000 PF00677 Lumazine binding domain LXM48_14010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LXM48_14010 PF01872 RibD C-terminal domain LXM48_14015 PF03477 ATP cone domain LXM48_14020 PF00909 Ammonium Transporter Family LXM48_14025 PF00543 Nitrogen regulatory protein P-II LXM48_14035 PF13335 Magnesium chelatase, subunit ChlI C-terminal LXM48_14035 PF01078 Magnesium chelatase, subunit ChlI LXM48_14050 PF03573 outer membrane porin, OprD family LXM48_14055 PF00719 Inorganic pyrophosphatase LXM48_14070 PF00501 AMP-binding enzyme LXM48_14070 PF13193 AMP-binding enzyme C-terminal domain LXM48_14075 PF00521 DNA gyrase/topoisomerase IV, subunit A LXM48_14075 PF03989 DNA gyrase C-terminal domain, beta-propeller LXM48_14080 PF07690 Major Facilitator Superfamily LXM48_14085 PF03458 UPF0126 domain LXM48_14090 PF02810 SEC-C motif LXM48_14095 PF03741 Integral membrane protein TerC family LXM48_14095 PF03471 Transporter associated domain LXM48_14100 PF03641 Possible lysine decarboxylase LXM48_14115 PF07690 Major Facilitator Superfamily LXM48_14125 PF00817 impB/mucB/samB family LXM48_14125 PF11799 impB/mucB/samB family C-terminal domain LXM48_14125 PF11798 IMS family HHH motif LXM48_14140 PF11842 Domain of unknown function (DUF3362) LXM48_14140 PF04055 Radical SAM superfamily LXM48_14140 PF08497 Radical SAM N-terminal LXM48_14150 PF01546 Peptidase family M20/M25/M40 LXM48_14150 PF07687 Peptidase dimerisation domain LXM48_14190 PF01327 Polypeptide deformylase LXM48_14200 PF17782 DprA winged helix domain LXM48_14200 PF02481 DNA recombination-mediator protein A LXM48_14205 PF01300 Telomere recombination LXM48_14210 PF00892 EamA-like transporter family LXM48_14220 PF00255 Glutathione peroxidase LXM48_14250 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LXM48_14255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LXM48_14255 PF02874 ATP synthase alpha/beta family, beta-barrel domain LXM48_14260 PF00231 ATP synthase LXM48_14265 PF00306 ATP synthase alpha/beta chain, C terminal domain LXM48_14265 PF02874 ATP synthase alpha/beta family, beta-barrel domain LXM48_14265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LXM48_14270 PF00213 ATP synthase delta (OSCP) subunit LXM48_14275 PF00430 ATP synthase B/B' CF(0) LXM48_14280 PF00137 ATP synthase subunit C LXM48_14285 PF00119 ATP synthase A chain LXM48_14305 PF00005 ABC transporter LXM48_14310 PF00950 ABC 3 transport family LXM48_14315 PF04463 Protein of unknown function (DUF523) LXM48_14320 PF01810 LysE type translocator LXM48_14325 PF04261 Dyp-type peroxidase family LXM48_14345 PF13296 Putative type VI secretion system Rhs element Vgr LXM48_14345 PF04717 Type VI secretion system, phage-baseplate injector LXM48_14345 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LXM48_14350 PF00390 Malic enzyme, N-terminal domain LXM48_14350 PF03949 Malic enzyme, NAD binding domain LXM48_14365 PF03485 Arginyl tRNA synthetase N terminal domain LXM48_14365 PF05746 DALR anticodon binding domain LXM48_14365 PF00750 tRNA synthetases class I (R) LXM48_14375 PF00561 alpha/beta hydrolase fold LXM48_14390 PF05726 Pirin C-terminal cupin domain LXM48_14390 PF02678 Pirin LXM48_14400 PF02540 NAD synthase LXM48_14400 PF00958 GMP synthase C terminal domain LXM48_14400 PF00117 Glutamine amidotransferase class-I LXM48_14415 PF09335 SNARE associated Golgi protein LXM48_14430 PF13614 AAA domain LXM48_14440 PF01722 BolA-like protein LXM48_14490 PF12419 SNF2 Helicase protein LXM48_14490 PF00271 Helicase conserved C-terminal domain LXM48_14490 PF00176 SNF2 family N-terminal domain LXM48_14505 PF01695 IstB-like ATP binding protein LXM48_14520 PF00005 ABC transporter LXM48_14520 PF00664 ABC transporter transmembrane region LXM48_14525 PF02321 Outer membrane efflux protein LXM48_14535 PF13817 IS66 C-terminal element LXM48_14535 PF13007 Transposase C of IS166 homeodomain LXM48_14535 PF13005 zinc-finger binding domain of transposase IS66 LXM48_14535 PF03050 Transposase IS66 family LXM48_14565 PF00691 OmpA family LXM48_14565 PF01389 OmpA-like transmembrane domain LXM48_14585 PF09905 DNA-binding protein VF530 LXM48_14595 PF00109 Beta-ketoacyl synthase, N-terminal domain LXM48_14595 PF02801 Beta-ketoacyl synthase, C-terminal domain LXM48_14610 PF00109 Beta-ketoacyl synthase, N-terminal domain LXM48_14610 PF02801 Beta-ketoacyl synthase, C-terminal domain LXM48_14620 PF04820 Tryptophan halogenase LXM48_14640 PF00221 Aromatic amino acid lyase LXM48_14650 PF00795 Carbon-nitrogen hydrolase LXM48_14650 PF00535 Glycosyl transferase family 2 LXM48_14655 PF07977 FabA-like domain LXM48_14665 PF00550 Phosphopantetheine attachment site LXM48_14670 PF00550 Phosphopantetheine attachment site LXM48_14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_14685 PF03466 LysR substrate binding domain LXM48_14690 PF02677 Epoxyqueuosine reductase QueH LXM48_14700 PF00925 GTP cyclohydrolase II LXM48_14700 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LXM48_14705 PF00885 6,7-dimethyl-8-ribityllumazine synthase LXM48_14710 PF01029 NusB family LXM48_14715 PF00586 AIR synthase related protein, N-terminal domain LXM48_14715 PF02769 AIR synthase related protein, C-terminal domain LXM48_14720 PF04608 Phosphatidylglycerophosphatase A LXM48_14725 PF14602 Hexapeptide repeat of succinyl-transferase LXM48_14725 PF12804 MobA-like NTP transferase domain LXM48_14725 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_14730 PF01380 SIS domain LXM48_14740 PF00665 Integrase core domain LXM48_14745 PF13401 AAA domain LXM48_14745 PF11426 Tn7 transposition regulator TnsC LXM48_14750 PF06527 TniQ LXM48_14750 PF15978 Tn7-like transposition protein D LXM48_14760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LXM48_14760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LXM48_14760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LXM48_14760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LXM48_14765 PF14052 Capsule assembly protein Wzi LXM48_14770 PF16363 GDP-mannose 4,6 dehydratase LXM48_14775 PF00342 Phosphoglucose isomerase LXM48_14780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LXM48_14780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LXM48_14780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LXM48_14785 PF00483 Nucleotidyl transferase LXM48_14790 PF02397 Bacterial sugar transferase LXM48_14805 PF00535 Glycosyl transferase family 2 LXM48_14820 PF02350 UDP-N-acetylglucosamine 2-epimerase LXM48_14825 PF01943 Polysaccharide biosynthesis protein LXM48_14830 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LXM48_14835 PF00483 Nucleotidyl transferase LXM48_14840 PF04321 RmlD substrate binding domain LXM48_14845 PF16363 GDP-mannose 4,6 dehydratase LXM48_14850 PF02719 Polysaccharide biosynthesis protein LXM48_14855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LXM48_14860 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_14860 PF14602 Hexapeptide repeat of succinyl-transferase LXM48_14860 PF17836 PglD N-terminal domain LXM48_14865 PF02397 Bacterial sugar transferase LXM48_14870 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_14870 PF14602 Hexapeptide repeat of succinyl-transferase LXM48_14870 PF12804 MobA-like NTP transferase domain LXM48_14875 PF00534 Glycosyl transferases group 1 LXM48_14875 PF13477 Glycosyl transferase 4-like LXM48_14880 PF00534 Glycosyl transferases group 1 LXM48_14880 PF13439 Glycosyltransferase Family 4 LXM48_14885 PF13439 Glycosyltransferase Family 4 LXM48_14885 PF00534 Glycosyl transferases group 1 LXM48_14890 PF00132 Bacterial transferase hexapeptide (six repeats) LXM48_14905 PF01370 NAD dependent epimerase/dehydratase family LXM48_14910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LXM48_14910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LXM48_14910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LXM48_14915 PF02563 Polysaccharide biosynthesis/export protein LXM48_14915 PF10531 SLBB domain LXM48_14915 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LXM48_14920 PF01451 Low molecular weight phosphotyrosine protein phosphatase LXM48_14925 PF13614 AAA domain LXM48_14925 PF02706 Chain length determinant protein LXM48_14925 PF13807 G-rich domain on putative tyrosine kinase LXM48_14930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LXM48_14930 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LXM48_14935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LXM48_14935 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LXM48_14945 PF03023 Lipid II flippase MurJ LXM48_14950 PF01510 N-acetylmuramoyl-L-alanine amidase LXM48_14955 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LXM48_14955 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LXM48_14960 PF01138 3' exoribonuclease family, domain 1 LXM48_14960 PF03725 3' exoribonuclease family, domain 2 LXM48_14965 PF00440 Bacterial regulatory proteins, tetR family LXM48_14970 PF15864 Protein glycosylation ligase LXM48_14970 PF11846 Virulence factor membrane-bound polymerase, C-terminal LXM48_14970 PF04932 O-Antigen ligase LXM48_14975 PF01323 DSBA-like thioredoxin domain LXM48_14985 PF13419 Haloacid dehalogenase-like hydrolase LXM48_14990 PF00106 short chain dehydrogenase LXM48_15015 PF00696 Amino acid kinase family LXM48_15015 PF00583 Acetyltransferase (GNAT) family LXM48_15020 PF09084 NMT1/THI5 like LXM48_15025 PF09084 NMT1/THI5 like LXM48_15030 PF00296 Luciferase-like monooxygenase LXM48_15035 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_15040 PF00005 ABC transporter LXM48_15045 PF08362 YcdC-like protein, C-terminal region LXM48_15045 PF00440 Bacterial regulatory proteins, tetR family LXM48_15060 PF06574 FAD synthetase LXM48_15060 PF01687 Riboflavin kinase LXM48_15065 PF00133 tRNA synthetases class I (I, L, M and V) LXM48_15065 PF08264 Anticodon-binding domain of tRNA LXM48_15065 PF06827 Zinc finger found in FPG and IleRS LXM48_15070 PF01252 Signal peptidase (SPase) II LXM48_15075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LXM48_15095 PF07995 Glucose / Sorbosone dehydrogenase LXM48_15125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LXM48_15135 PF07859 alpha/beta hydrolase fold LXM48_15150 PF01025 GrpE LXM48_15155 PF00012 Hsp70 protein LXM48_15160 PF00905 Penicillin binding protein transpeptidase domain LXM48_15175 PF01521 Iron-sulphur cluster biosynthesis LXM48_15195 PF12848 ABC transporter LXM48_15195 PF00005 ABC transporter LXM48_15205 PF00204 DNA gyrase B LXM48_15205 PF00986 DNA gyrase B subunit, carboxyl terminus LXM48_15205 PF18053 DNA gyrase B subunit insert domain LXM48_15205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_15205 PF01751 Toprim domain LXM48_15210 PF02463 RecF/RecN/SMC N terminal domain LXM48_15215 PF00712 DNA polymerase III beta subunit, N-terminal domain LXM48_15215 PF02767 DNA polymerase III beta subunit, central domain LXM48_15215 PF02768 DNA polymerase III beta subunit, C-terminal domain LXM48_15220 PF00308 Bacterial dnaA protein LXM48_15220 PF08299 Bacterial dnaA protein helix-turn-helix LXM48_15220 PF11638 DnaA N-terminal domain LXM48_15225 PF00468 Ribosomal protein L34 LXM48_15230 PF00825 Ribonuclease P LXM48_15235 PF01809 Putative membrane protein insertion efficiency factor LXM48_15240 PF02096 60Kd inner membrane protein LXM48_15240 PF14849 YidC periplasmic domain LXM48_15245 PF01926 50S ribosome-binding GTPase LXM48_15245 PF12631 MnmE helical domain LXM48_15245 PF10396 GTP-binding protein TrmE N-terminus LXM48_15250 PF07690 Major Facilitator Superfamily LXM48_15255 PF02583 Metal-sensitive transcriptional repressor LXM48_15260 PF01545 Cation efflux family LXM48_15260 PF16916 Dimerisation domain of Zinc Transporter LXM48_15265 PF13098 Thioredoxin-like domain LXM48_15265 PF10411 Disulfide bond isomerase protein N-terminus LXM48_15275 PF00156 Phosphoribosyl transferase domain LXM48_15280 PF01979 Amidohydrolase family LXM48_15290 PF03738 Glutathionylspermidine synthase preATP-grasp LXM48_15300 PF03741 Integral membrane protein TerC family LXM48_15325 PF01225 Mur ligase family, catalytic domain LXM48_15325 PF02875 Mur ligase family, glutamate ligase domain LXM48_15325 PF08245 Mur ligase middle domain LXM48_15335 PF00731 AIR carboxylase LXM48_15340 PF02222 ATP-grasp domain LXM48_15340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LXM48_15345 PF13406 Transglycosylase SLT domain LXM48_15350 PF03702 Anhydro-N-acetylmuramic acid kinase LXM48_15355 PF00579 tRNA synthetases class I (W and Y) LXM48_15385 PF07690 Major Facilitator Superfamily LXM48_15395 PF00209 Sodium:neurotransmitter symporter family LXM48_15420 PF01189 16S rRNA methyltransferase RsmB/F LXM48_15420 PF01029 NusB family LXM48_15425 PF02911 Formyl transferase, C-terminal domain LXM48_15425 PF00551 Formyl transferase LXM48_15430 PF00920 Dehydratase family LXM48_15435 PF00920 Dehydratase family LXM48_15445 PF07715 TonB-dependent Receptor Plug Domain LXM48_15445 PF00593 TonB dependent receptor LXM48_15455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_15455 PF03466 LysR substrate binding domain LXM48_15460 PF00860 Permease family LXM48_15465 PF00311 Phosphoenolpyruvate carboxylase LXM48_15470 PF00440 Bacterial regulatory proteins, tetR family LXM48_15475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LXM48_15480 PF00873 AcrB/AcrD/AcrF family LXM48_15490 PF01556 DnaJ C terminal domain LXM48_15490 PF00226 DnaJ domain LXM48_15490 PF00684 DnaJ central domain LXM48_15500 PF01113 Dihydrodipicolinate reductase, N-terminus LXM48_15500 PF05173 Dihydrodipicolinate reductase, C-terminus LXM48_15515 PF00155 Aminotransferase class I and II LXM48_15520 PF08240 Alcohol dehydrogenase GroES-like domain LXM48_15520 PF00107 Zinc-binding dehydrogenase LXM48_15525 PF03352 Methyladenine glycosylase LXM48_15540 PF00633 Helix-hairpin-helix motif LXM48_15540 PF14815 NUDIX domain LXM48_15540 PF00730 HhH-GPD superfamily base excision DNA repair protein LXM48_15555 PF07043 Protein of unknown function (DUF1328) LXM48_15560 PF03692 Putative zinc- or iron-chelating domain LXM48_15565 PF00004 ATPase family associated with various cellular activities (AAA) LXM48_15565 PF16193 AAA C-terminal domain LXM48_15565 PF12002 MgsA AAA+ ATPase C terminal LXM48_15570 PF01037 Lrp/AsnC ligand binding domain LXM48_15570 PF13404 AsnC-type helix-turn-helix domain LXM48_15575 PF00005 ABC transporter LXM48_15580 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_15585 PF00528 Binding-protein-dependent transport system inner membrane component LXM48_15590 PF00497 Bacterial extracellular solute-binding proteins, family 3 LXM48_15595 PF01259 SAICAR synthetase LXM48_15605 PF00701 Dihydrodipicolinate synthetase family LXM48_15610 PF00857 Isochorismatase family LXM48_15615 PF01758 Sodium Bile acid symporter family LXM48_15620 PF13089 Polyphosphate kinase N-terminal domain LXM48_15620 PF17941 Polyphosphate kinase C-terminal domain 1 LXM48_15620 PF13090 Polyphosphate kinase C-terminal domain 2 LXM48_15620 PF02503 Polyphosphate kinase middle domain LXM48_15645 PF02580 D-Tyr-tRNA(Tyr) deacylase LXM48_15650 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LXM48_15650 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LXM48_15655 PF00581 Rhodanese-like domain LXM48_15660 PF02666 Phosphatidylserine decarboxylase LXM48_15665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_15665 PF00989 PAS fold LXM48_15665 PF11808 Phosphate regulon sensor protein PhoR LXM48_15665 PF00512 His Kinase A (phospho-acceptor) domain LXM48_15670 PF00072 Response regulator receiver domain LXM48_15670 PF00486 Transcriptional regulatory protein, C terminal LXM48_15680 PF00106 short chain dehydrogenase LXM48_15685 PF01554 MatE LXM48_15690 PF00155 Aminotransferase class I and II LXM48_15695 PF04286 Protein of unknown function (DUF445) LXM48_15710 PF04262 Glutamate-cysteine ligase LXM48_15715 PF02600 Disulfide bond formation protein DsbB LXM48_15725 PF05728 Uncharacterised protein family (UPF0227) LXM48_15730 PF01751 Toprim domain LXM48_15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_15730 PF00986 DNA gyrase B subunit, carboxyl terminus LXM48_15730 PF00204 DNA gyrase B LXM48_15745 PF02653 Branched-chain amino acid transport system / permease component LXM48_15755 PF00005 ABC transporter LXM48_15755 PF12399 Branched-chain amino acid ATP-binding cassette transporter LXM48_15760 PF00005 ABC transporter LXM48_15805 PF02683 Cytochrome C biogenesis protein transmembrane region LXM48_15805 PF11412 Disulphide bond corrector protein DsbC LXM48_15815 PF00990 Diguanylate cyclase, GGDEF domain LXM48_15820 PF02525 Flavodoxin-like fold LXM48_15825 PF07859 alpha/beta hydrolase fold LXM48_15835 PF03960 ArsC family LXM48_15840 PF03372 Endonuclease/Exonuclease/phosphatase family LXM48_15845 PF00156 Phosphoribosyl transferase domain LXM48_15865 PF01047 MarR family LXM48_15870 PF00255 Glutathione peroxidase LXM48_15875 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LXM48_15875 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LXM48_15880 PF03033 Glycosyltransferase family 28 N-terminal domain LXM48_15880 PF04101 Glycosyltransferase family 28 C-terminal domain LXM48_15885 PF08245 Mur ligase middle domain LXM48_15885 PF02875 Mur ligase family, glutamate ligase domain LXM48_15885 PF01225 Mur ligase family, catalytic domain LXM48_15890 PF01820 D-ala D-ala ligase N-terminus LXM48_15890 PF07478 D-ala D-ala ligase C-terminus LXM48_15895 PF03799 Cell division protein FtsQ LXM48_15895 PF08478 POTRA domain, FtsQ-type LXM48_15900 PF02491 SHS2 domain inserted in FTSA LXM48_15905 PF00091 Tubulin/FtsZ family, GTPase domain LXM48_15905 PF12327 FtsZ family, C-terminal domain LXM48_15910 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LXM48_15925 PF00456 Transketolase, thiamine diphosphate binding domain LXM48_15925 PF17831 Pyruvate dehydrogenase E1 component middle domain LXM48_15930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LXM48_15930 PF00364 Biotin-requiring enzyme LXM48_15930 PF02817 e3 binding domain LXM48_15935 PF01169 Uncharacterized protein family UPF0016 LXM48_15940 PF00258 Flavodoxin LXM48_15940 PF01613 Flavin reductase like domain LXM48_15945 PF03692 Putative zinc- or iron-chelating domain LXM48_15950 PF00478 IMP dehydrogenase / GMP reductase domain LXM48_15950 PF00571 CBS domain LXM48_15955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LXM48_15955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LXM48_15955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LXM48_15955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LXM48_15960 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LXM48_15960 PF01243 Pyridoxamine 5'-phosphate oxidase LXM48_15965 PF01368 DHH family LXM48_15965 PF17768 RecJ OB domain LXM48_15965 PF02272 DHHA1 domain LXM48_15990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LXM48_15995 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LXM48_16000 PF04452 RNA methyltransferase LXM48_16005 PF00924 Mechanosensitive ion channel LXM48_16010 PF16177 Acetyl-coenzyme A synthetase N-terminus LXM48_16010 PF13193 AMP-binding enzyme C-terminal domain LXM48_16010 PF00501 AMP-binding enzyme LXM48_16015 PF00677 Lumazine binding domain LXM48_16030 PF00296 Luciferase-like monooxygenase LXM48_16035 PF03358 NADPH-dependent FMN reductase LXM48_16040 PF00072 Response regulator receiver domain LXM48_16040 PF00196 Bacterial regulatory proteins, luxR family LXM48_16050 PF00072 Response regulator receiver domain LXM48_16050 PF09456 RcsC Alpha-Beta-Loop (ABL) LXM48_16050 PF00512 His Kinase A (phospho-acceptor) domain LXM48_16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_16055 PF04341 Protein of unknown function, DUF485 LXM48_16060 PF00474 Sodium:solute symporter family LXM48_16070 PF02028 BCCT, betaine/carnitine/choline family transporter LXM48_16080 PF00990 Diguanylate cyclase, GGDEF domain LXM48_16080 PF17158 Membrane-associated sensor, integral membrane domain LXM48_16090 PF17755 UvrA DNA-binding domain LXM48_16090 PF17760 UvrA interaction domain LXM48_16100 PF08543 Phosphomethylpyrimidine kinase LXM48_16100 PF03070 TENA/THI-4/PQQC family LXM48_16100 PF02581 Thiamine monophosphate synthase LXM48_16110 PF07690 Major Facilitator Superfamily LXM48_16115 PF00436 Single-strand binding protein family LXM48_16145 PF07731 Multicopper oxidase LXM48_16145 PF00394 Multicopper oxidase LXM48_16145 PF07732 Multicopper oxidase LXM48_16155 PF00486 Transcriptional regulatory protein, C terminal LXM48_16155 PF00072 Response regulator receiver domain LXM48_16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LXM48_16160 PF00672 HAMP domain LXM48_16160 PF00512 His Kinase A (phospho-acceptor) domain LXM48_16165 PF13194 Domain of unknown function (DUF4010) LXM48_16210 PF13610 DDE domain LXM48_16220 PF07670 Nucleoside recognition LXM48_16220 PF07664 Ferrous iron transport protein B C terminus LXM48_16220 PF02421 Ferrous iron transport protein B LXM48_16230 PF01545 Cation efflux family LXM48_16235 PF13411 MerR HTH family regulatory protein LXM48_16245 PF02321 Outer membrane efflux protein LXM48_16250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LXM48_16255 PF00873 AcrB/AcrD/AcrF family LXM48_16265 PF00436 Single-strand binding protein family LXM48_16270 PF10415 Fumarase C C-terminus LXM48_16270 PF00206 Lyase LXM48_16275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LXM48_16275 PF03466 LysR substrate binding domain LXM48_16290 PF01555 DNA methylase LXM48_16310 PF01381 Helix-turn-helix