locus-tag class description CFH90_00005 PF11638 DnaA N-terminal domain CFH90_00005 PF08299 Bacterial dnaA protein helix-turn-helix CFH90_00005 PF00308 Bacterial dnaA protein CFH90_00010 PF02767 DNA polymerase III beta subunit, central domain CFH90_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CFH90_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CFH90_00015 PF02463 RecF/RecN/SMC N terminal domain CFH90_00020 PF01751 Toprim domain CFH90_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_00020 PF18053 DNA gyrase B subunit insert domain CFH90_00020 PF00986 DNA gyrase B subunit, carboxyl terminus CFH90_00020 PF00204 DNA gyrase B CFH90_00035 PF12848 ABC transporter CFH90_00035 PF00005 ABC transporter CFH90_00055 PF01521 Iron-sulphur cluster biosynthesis CFH90_00070 PF00905 Penicillin binding protein transpeptidase domain CFH90_00075 PF00012 Hsp70 protein CFH90_00080 PF01025 GrpE CFH90_00095 PF07859 alpha/beta hydrolase fold CFH90_00105 PF01797 Transposase IS200 like CFH90_00115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CFH90_00145 PF07690 Major Facilitator Superfamily CFH90_00160 PF00209 Sodium:neurotransmitter symporter family CFH90_00185 PF01189 16S rRNA methyltransferase RsmB/F CFH90_00185 PF01029 NusB family CFH90_00190 PF00551 Formyl transferase CFH90_00190 PF02911 Formyl transferase, C-terminal domain CFH90_00195 PF00920 Dehydratase family CFH90_00200 PF00920 Dehydratase family CFH90_00210 PF07715 TonB-dependent Receptor Plug Domain CFH90_00210 PF00593 TonB dependent receptor CFH90_00220 PF03466 LysR substrate binding domain CFH90_00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_00225 PF00860 Permease family CFH90_00230 PF00311 Phosphoenolpyruvate carboxylase CFH90_00235 PF00440 Bacterial regulatory proteins, tetR family CFH90_00245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFH90_00250 PF00873 AcrB/AcrD/AcrF family CFH90_00260 PF00684 DnaJ central domain CFH90_00260 PF01556 DnaJ C terminal domain CFH90_00260 PF00226 DnaJ domain CFH90_00270 PF01113 Dihydrodipicolinate reductase, N-terminus CFH90_00270 PF05173 Dihydrodipicolinate reductase, C-terminus CFH90_00290 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_00290 PF00107 Zinc-binding dehydrogenase CFH90_00295 PF03352 Methyladenine glycosylase CFH90_00310 PF00730 HhH-GPD superfamily base excision DNA repair protein CFH90_00310 PF14815 NUDIX domain CFH90_00310 PF00633 Helix-hairpin-helix motif CFH90_00325 PF07043 Protein of unknown function (DUF1328) CFH90_00330 PF03692 Putative zinc- or iron-chelating domain CFH90_00335 PF16193 AAA C-terminal domain CFH90_00335 PF00004 ATPase family associated with various cellular activities (AAA) CFH90_00335 PF12002 MgsA AAA+ ATPase C terminal CFH90_00340 PF01797 Transposase IS200 like CFH90_00355 PF01037 Lrp/AsnC ligand binding domain CFH90_00360 PF00005 ABC transporter CFH90_00365 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_00370 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_00375 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFH90_00385 PF01259 SAICAR synthetase CFH90_00395 PF00701 Dihydrodipicolinate synthetase family CFH90_00405 PF00857 Isochorismatase family CFH90_00410 PF01758 Sodium Bile acid symporter family CFH90_00415 PF13089 Polyphosphate kinase N-terminal domain CFH90_00415 PF02503 Polyphosphate kinase middle domain CFH90_00415 PF13090 Polyphosphate kinase C-terminal domain 2 CFH90_00415 PF17941 Polyphosphate kinase C-terminal domain 1 CFH90_00440 PF02580 D-Tyr-tRNA(Tyr) deacylase CFH90_00445 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CFH90_00445 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CFH90_00450 PF00581 Rhodanese-like domain CFH90_00455 PF02666 Phosphatidylserine decarboxylase CFH90_00460 PF11808 Phosphate regulon sensor protein PhoR CFH90_00460 PF00989 PAS fold CFH90_00460 PF00512 His Kinase A (phospho-acceptor) domain CFH90_00460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_00465 PF00486 Transcriptional regulatory protein, C terminal CFH90_00465 PF00072 Response regulator receiver domain CFH90_00475 PF00106 short chain dehydrogenase CFH90_00480 PF01554 MatE CFH90_00485 PF00155 Aminotransferase class I and II CFH90_00490 PF04286 Protein of unknown function (DUF445) CFH90_00505 PF04262 Glutamate-cysteine ligase CFH90_00510 PF02600 Disulfide bond formation protein DsbB CFH90_00520 PF05728 Uncharacterised protein family (UPF0227) CFH90_00525 PF00204 DNA gyrase B CFH90_00525 PF00986 DNA gyrase B subunit, carboxyl terminus CFH90_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_00525 PF01751 Toprim domain CFH90_00540 PF02653 Branched-chain amino acid transport system / permease component CFH90_00550 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFH90_00550 PF00005 ABC transporter CFH90_00555 PF00005 ABC transporter CFH90_00605 PF02683 Cytochrome C biogenesis protein transmembrane region CFH90_00605 PF11412 Disulphide bond corrector protein DsbC CFH90_00615 PF00990 Diguanylate cyclase, GGDEF domain CFH90_00615 PF07694 5TMR of 5TMR-LYT CFH90_00625 PF02525 Flavodoxin-like fold CFH90_00630 PF07859 alpha/beta hydrolase fold CFH90_00640 PF03960 ArsC family CFH90_00645 PF03372 Endonuclease/Exonuclease/phosphatase family CFH90_00650 PF00156 Phosphoribosyl transferase domain CFH90_00655 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFH90_00655 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFH90_00660 PF00593 TonB dependent receptor CFH90_00660 PF07715 TonB-dependent Receptor Plug Domain CFH90_00670 PF01047 MarR family CFH90_00675 PF00255 Glutathione peroxidase CFH90_00680 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CFH90_00680 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CFH90_00685 PF04101 Glycosyltransferase family 28 C-terminal domain CFH90_00685 PF03033 Glycosyltransferase family 28 N-terminal domain CFH90_00690 PF02875 Mur ligase family, glutamate ligase domain CFH90_00690 PF08245 Mur ligase middle domain CFH90_00690 PF01225 Mur ligase family, catalytic domain CFH90_00695 PF07478 D-ala D-ala ligase C-terminus CFH90_00695 PF01820 D-ala D-ala ligase N-terminus CFH90_00700 PF03799 Cell division protein FtsQ CFH90_00700 PF08478 POTRA domain, FtsQ-type CFH90_00705 PF02491 SHS2 domain inserted in FTSA CFH90_00710 PF12327 FtsZ family, C-terminal domain CFH90_00710 PF00091 Tubulin/FtsZ family, GTPase domain CFH90_00715 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CFH90_00730 PF00456 Transketolase, thiamine diphosphate binding domain CFH90_00730 PF17831 Pyruvate dehydrogenase E1 component middle domain CFH90_00735 PF00364 Biotin-requiring enzyme CFH90_00735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFH90_00735 PF02817 e3 binding domain CFH90_00740 PF01169 Uncharacterized protein family UPF0016 CFH90_00745 PF00258 Flavodoxin CFH90_00745 PF01613 Flavin reductase like domain CFH90_00750 PF03692 Putative zinc- or iron-chelating domain CFH90_00755 PF00478 IMP dehydrogenase / GMP reductase domain CFH90_00755 PF00571 CBS domain CFH90_00760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFH90_00760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFH90_00760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFH90_00760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFH90_00765 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CFH90_00765 PF01243 Pyridoxamine 5'-phosphate oxidase CFH90_00770 PF01368 DHH family CFH90_00770 PF02272 DHHA1 domain CFH90_00770 PF17768 RecJ OB domain CFH90_00785 PF03462 PCRF domain CFH90_00785 PF00472 RF-1 domain CFH90_00795 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFH90_00800 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CFH90_00805 PF04452 RNA methyltransferase CFH90_00810 PF00924 Mechanosensitive ion channel CFH90_00815 PF00501 AMP-binding enzyme CFH90_00815 PF16177 Acetyl-coenzyme A synthetase N-terminus CFH90_00815 PF13193 AMP-binding enzyme C-terminal domain CFH90_00820 PF00677 Lumazine binding domain CFH90_00835 PF00296 Luciferase-like monooxygenase CFH90_00840 PF03358 NADPH-dependent FMN reductase CFH90_00845 PF00196 Bacterial regulatory proteins, luxR family CFH90_00845 PF00072 Response regulator receiver domain CFH90_00855 PF09456 RcsC Alpha-Beta-Loop (ABL) CFH90_00855 PF00512 His Kinase A (phospho-acceptor) domain CFH90_00855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_00855 PF00072 Response regulator receiver domain CFH90_00860 PF04341 Protein of unknown function, DUF485 CFH90_00865 PF00474 Sodium:solute symporter family CFH90_00875 PF02028 BCCT, betaine/carnitine/choline family transporter CFH90_00900 PF00990 Diguanylate cyclase, GGDEF domain CFH90_00900 PF07694 5TMR of 5TMR-LYT CFH90_00910 PF17760 UvrA interaction domain CFH90_00910 PF17755 UvrA DNA-binding domain CFH90_00920 PF03070 TENA/THI-4/PQQC family CFH90_00920 PF08543 Phosphomethylpyrimidine kinase CFH90_00920 PF02581 Thiamine monophosphate synthase CFH90_00930 PF07690 Major Facilitator Superfamily CFH90_00935 PF00436 Single-strand binding protein family CFH90_00955 PF03050 Transposase IS66 family CFH90_00955 PF13817 IS66 C-terminal element CFH90_00955 PF13007 Transposase C of IS166 homeodomain CFH90_00955 PF13005 zinc-finger binding domain of transposase IS66 CFH90_00960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_00960 PF03466 LysR substrate binding domain CFH90_00980 PF08267 Cobalamin-independent synthase, N-terminal domain CFH90_00980 PF01717 Cobalamin-independent synthase, Catalytic domain CFH90_00985 PF01613 Flavin reductase like domain CFH90_00990 PF00578 AhpC/TSA family CFH90_00990 PF10417 C-terminal domain of 1-Cys peroxiredoxin CFH90_01005 PF02678 Pirin CFH90_01005 PF05726 Pirin C-terminal cupin domain CFH90_01120 PF12161 HsdM N-terminal domain CFH90_01120 PF02384 N-6 DNA Methylase CFH90_01125 PF01420 Type I restriction modification DNA specificity domain CFH90_01135 PF12008 Type I restriction and modification enzyme - subunit R C terminal CFH90_01135 PF18766 SWI2/SNF2 ATPase CFH90_01135 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CFH90_01145 PF00589 Phage integrase family CFH90_01145 PF13356 Arm DNA-binding domain CFH90_01155 PF02705 K+ potassium transporter CFH90_01170 PF01348 Type II intron maturase CFH90_01170 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CFH90_01230 PF13411 MerR HTH family regulatory protein CFH90_01235 PF01545 Cation efflux family CFH90_01245 PF07664 Ferrous iron transport protein B C terminus CFH90_01245 PF07670 Nucleoside recognition CFH90_01245 PF02421 Ferrous iron transport protein B CFH90_01265 PF00005 ABC transporter CFH90_01345 PF04221 RelB antitoxin CFH90_01350 PF05230 MASE2 domain CFH90_01350 PF00990 Diguanylate cyclase, GGDEF domain CFH90_01355 PF00199 Catalase CFH90_01355 PF06628 Catalase-related immune-responsive CFH90_01380 PF00239 Resolvase, N terminal domain CFH90_01380 PF02796 Helix-turn-helix domain of resolvase CFH90_01385 PF01323 DSBA-like thioredoxin domain CFH90_01410 PF02583 Metal-sensitive transcriptional repressor CFH90_01420 PF07690 Major Facilitator Superfamily CFH90_01440 PF00873 AcrB/AcrD/AcrF family CFH90_01445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFH90_01445 PF00529 HlyD membrane-fusion protein of T1SS CFH90_01460 PF00403 Heavy-metal-associated domain CFH90_01505 PF13194 Domain of unknown function (DUF4010) CFH90_01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_01510 PF00672 HAMP domain CFH90_01510 PF00512 His Kinase A (phospho-acceptor) domain CFH90_01515 PF00486 Transcriptional regulatory protein, C terminal CFH90_01515 PF00072 Response regulator receiver domain CFH90_01525 PF07731 Multicopper oxidase CFH90_01525 PF00394 Multicopper oxidase CFH90_01525 PF07732 Multicopper oxidase CFH90_01555 PF00230 Major intrinsic protein CFH90_01575 PF00977 Histidine biosynthesis protein CFH90_01580 PF01636 Phosphotransferase enzyme family CFH90_01585 PF00313 'Cold-shock' DNA-binding domain CFH90_01600 PF01381 Helix-turn-helix CFH90_01605 PF00977 Histidine biosynthesis protein CFH90_01620 PF00117 Glutamine amidotransferase class-I CFH90_01625 PF00475 Imidazoleglycerol-phosphate dehydratase CFH90_01650 PF00583 Acetyltransferase (GNAT) family CFH90_01655 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CFH90_01655 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CFH90_01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_01660 PF00512 His Kinase A (phospho-acceptor) domain CFH90_01660 PF00672 HAMP domain CFH90_01665 PF00072 Response regulator receiver domain CFH90_01665 PF00486 Transcriptional regulatory protein, C terminal CFH90_01670 PF17674 HHH domain CFH90_01670 PF09371 Tex-like protein N-terminal domain CFH90_01670 PF00575 S1 RNA binding domain CFH90_01670 PF16921 Tex protein YqgF-like domain CFH90_01685 PF00106 short chain dehydrogenase CFH90_01690 PF01053 Cys/Met metabolism PLP-dependent enzyme CFH90_01695 PF12848 ABC transporter CFH90_01695 PF00005 ABC transporter CFH90_01715 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFH90_01745 PF01795 MraW methylase family CFH90_01755 PF00905 Penicillin binding protein transpeptidase domain CFH90_01755 PF03717 Penicillin-binding Protein dimerisation domain CFH90_01760 PF01225 Mur ligase family, catalytic domain CFH90_01760 PF02875 Mur ligase family, glutamate ligase domain CFH90_01760 PF08245 Mur ligase middle domain CFH90_01765 PF01225 Mur ligase family, catalytic domain CFH90_01765 PF08245 Mur ligase middle domain CFH90_01765 PF02875 Mur ligase family, glutamate ligase domain CFH90_01770 PF00953 Glycosyl transferase family 4 CFH90_01775 PF13847 Methyltransferase domain CFH90_01780 PF17092 Penicillin-binding protein OB-like domain CFH90_01780 PF00912 Transglycosylase CFH90_01780 PF00905 Penicillin binding protein transpeptidase domain CFH90_01805 PF00263 Bacterial type II and III secretion system protein CFH90_01805 PF07660 Secretin and TonB N terminus short domain CFH90_01805 PF03958 Bacterial type II/III secretion system short domain CFH90_01805 PF11741 AMIN domain CFH90_01810 PF01202 Shikimate kinase CFH90_01815 PF01761 3-dehydroquinate synthase CFH90_01825 PF04898 Glutamate synthase central domain CFH90_01825 PF01493 GXGXG motif CFH90_01825 PF00310 Glutamine amidotransferases class-II CFH90_01825 PF01645 Conserved region in glutamate synthase CFH90_01830 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CFH90_01830 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_01840 PF04011 LemA family CFH90_01845 PF04536 TPM domain CFH90_01930 PF00114 Pilin (bacterial filament) CFH90_01930 PF07963 Prokaryotic N-terminal methylation motif CFH90_01955 PF00210 Ferritin-like domain CFH90_01960 PF04324 BFD-like [2Fe-2S] binding domain CFH90_01965 PF01042 Endoribonuclease L-PSP CFH90_01970 PF13291 ACT domain CFH90_01970 PF04607 Region found in RelA / SpoT proteins CFH90_01970 PF02824 TGS domain CFH90_01975 PF01192 RNA polymerase Rpb6 CFH90_01980 PF00625 Guanylate kinase CFH90_01985 PF02401 LytB protein CFH90_02015 PF00114 Pilin (bacterial filament) CFH90_02015 PF07963 Prokaryotic N-terminal methylation motif CFH90_02025 PF00886 Ribosomal protein S16 CFH90_02030 PF01782 RimM N-terminal domain CFH90_02030 PF05239 PRC-barrel domain CFH90_02035 PF01746 tRNA (Guanine-1)-methyltransferase CFH90_02040 PF01245 Ribosomal protein L19 CFH90_02045 PF00561 alpha/beta hydrolase fold CFH90_02055 PF03280 Proteobacterial lipase chaperone protein CFH90_02060 PF16198 tRNA pseudouridylate synthase B C-terminal domain CFH90_02060 PF09157 Pseudouridine synthase II TruB, C-terminal CFH90_02060 PF01509 TruB family pseudouridylate synthase (N terminal domain) CFH90_02065 PF01925 Sulfite exporter TauE/SafE CFH90_02075 PF00892 EamA-like transporter family CFH90_02080 PF00892 EamA-like transporter family CFH90_02085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFH90_02085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFH90_02090 PF02913 FAD linked oxidases, C-terminal domain CFH90_02090 PF01565 FAD binding domain CFH90_02105 PF02678 Pirin CFH90_02105 PF05726 Pirin C-terminal cupin domain CFH90_02115 PF13358 DDE superfamily endonuclease CFH90_02120 PF07690 Major Facilitator Superfamily CFH90_02125 PF12823 Domain of unknown function (DUF3817) CFH90_02130 PF12805 FUSC-like inner membrane protein yccS CFH90_02135 PF00080 Copper/zinc superoxide dismutase (SODC) CFH90_02140 PF01594 AI-2E family transporter CFH90_02145 PF13614 AAA domain CFH90_02155 PF01209 ubiE/COQ5 methyltransferase family CFH90_02170 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CFH90_02175 PF01197 Ribosomal protein L31 CFH90_02180 PF03109 ABC1 family CFH90_02190 PF01554 MatE CFH90_02200 PF06969 HemN C-terminal domain CFH90_02200 PF04055 Radical SAM superfamily CFH90_02215 PF01965 DJ-1/PfpI family CFH90_02220 PF12727 PBP superfamily domain CFH90_02220 PF12728 Helix-turn-helix domain CFH90_02225 PF12806 Acetyl-CoA dehydrogenase C-terminal like CFH90_02225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_02225 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_02225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_02235 PF01488 Shikimate / quinate 5-dehydrogenase CFH90_02235 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CFH90_02235 PF08501 Shikimate dehydrogenase substrate binding domain CFH90_02250 PF06969 HemN C-terminal domain CFH90_02250 PF04055 Radical SAM superfamily CFH90_02255 PF00925 GTP cyclohydrolase II CFH90_02260 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CFH90_02260 PF02780 Transketolase, C-terminal domain CFH90_02260 PF02779 Transketolase, pyrimidine binding domain CFH90_02265 PF00459 Inositol monophosphatase family CFH90_02270 PF00270 DEAD/DEAH box helicase CFH90_02270 PF00271 Helicase conserved C-terminal domain CFH90_02275 PF00005 ABC transporter CFH90_02280 PF02405 Permease MlaE CFH90_02285 PF02470 MlaD protein CFH90_02290 PF05494 MlaC protein CFH90_02300 PF01544 CorA-like Mg2+ transporter protein CFH90_02305 PF03641 Possible lysine decarboxylase CFH90_02310 PF00293 NUDIX domain CFH90_02315 PF00156 Phosphoribosyl transferase domain CFH90_02320 PF00270 DEAD/DEAH box helicase CFH90_02320 PF00271 Helicase conserved C-terminal domain CFH90_02320 PF17191 RecG wedge domain CFH90_02345 PF01553 Acyltransferase CFH90_02355 PF00375 Sodium:dicarboxylate symporter family CFH90_02365 PF01926 50S ribosome-binding GTPase CFH90_02370 PF02082 Transcriptional regulator CFH90_02375 PF00042 Globin CFH90_02375 PF00970 Oxidoreductase FAD-binding domain CFH90_02375 PF00175 Oxidoreductase NAD-binding domain CFH90_02380 PF05872 Bacterial protein of unknown function (DUF853) CFH90_02385 PF01053 Cys/Met metabolism PLP-dependent enzyme CFH90_02390 PF00117 Glutamine amidotransferase class-I CFH90_02395 PF00338 Ribosomal protein S10p/S20e CFH90_02400 PF00297 Ribosomal protein L3 CFH90_02405 PF00573 Ribosomal protein L4/L1 family CFH90_02410 PF00276 Ribosomal protein L23 CFH90_02415 PF00181 Ribosomal Proteins L2, RNA binding domain CFH90_02415 PF03947 Ribosomal Proteins L2, C-terminal domain CFH90_02420 PF00203 Ribosomal protein S19 CFH90_02425 PF00237 Ribosomal protein L22p/L17e CFH90_02430 PF07650 KH domain CFH90_02430 PF00189 Ribosomal protein S3, C-terminal domain CFH90_02435 PF00252 Ribosomal protein L16p/L10e CFH90_02440 PF00831 Ribosomal L29 protein CFH90_02445 PF00366 Ribosomal protein S17 CFH90_02450 PF00238 Ribosomal protein L14p/L23e CFH90_02455 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CFH90_02455 PF00467 KOW motif CFH90_02460 PF00281 Ribosomal protein L5 CFH90_02460 PF00673 ribosomal L5P family C-terminus CFH90_02465 PF00253 Ribosomal protein S14p/S29e CFH90_02470 PF00410 Ribosomal protein S8 CFH90_02475 PF00347 Ribosomal protein L6 CFH90_02480 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CFH90_02485 PF00333 Ribosomal protein S5, N-terminal domain CFH90_02485 PF03719 Ribosomal protein S5, C-terminal domain CFH90_02490 PF00327 Ribosomal protein L30p/L7e CFH90_02495 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CFH90_02500 PF00344 SecY translocase CFH90_02505 PF00444 Ribosomal protein L36 CFH90_02510 PF00416 Ribosomal protein S13/S18 CFH90_02515 PF00411 Ribosomal protein S11 CFH90_02520 PF01479 S4 domain CFH90_02520 PF00163 Ribosomal protein S4/S9 N-terminal domain CFH90_02525 PF01000 RNA polymerase Rpb3/RpoA insert domain CFH90_02525 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CFH90_02525 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CFH90_02530 PF01196 Ribosomal protein L17 CFH90_02535 PF00743 Flavin-binding monooxygenase-like CFH90_02545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_02545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_02545 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_02550 PF03937 Flavinator of succinate dehydrogenase CFH90_02580 PF09526 Probable metal-binding protein (DUF2387) CFH90_02585 PF01432 Peptidase family M3 CFH90_02590 PF04294 VanW like protein CFH90_02595 PF00575 S1 RNA binding domain CFH90_02595 PF17876 Cold shock domain CFH90_02595 PF08206 Ribonuclease B OB domain CFH90_02595 PF00773 RNB domain CFH90_02595 PF08461 Ribonuclease R winged-helix domain CFH90_02630 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFH90_02645 PF03631 Virulence factor BrkB CFH90_02650 PF03358 NADPH-dependent FMN reductase CFH90_02660 PF00990 Diguanylate cyclase, GGDEF domain CFH90_02660 PF07694 5TMR of 5TMR-LYT CFH90_02690 PF00593 TonB dependent receptor CFH90_02690 PF07715 TonB-dependent Receptor Plug Domain CFH90_02700 PF02130 Uncharacterized protein family UPF0054 CFH90_02705 PF02562 PhoH-like protein CFH90_02710 PF04055 Radical SAM superfamily CFH90_02710 PF01938 TRAM domain CFH90_02710 PF00919 Uncharacterized protein family UPF0004 CFH90_02715 PF01551 Peptidase family M23 CFH90_02715 PF10145 Phage-related minor tail protein CFH90_02715 PF01464 Transglycosylase SLT domain CFH90_02725 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CFH90_02725 PF00056 lactate/malate dehydrogenase, NAD binding domain CFH90_02750 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CFH90_02755 PF01066 CDP-alcohol phosphatidyltransferase CFH90_02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_02790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFH90_02790 PF00403 Heavy-metal-associated domain CFH90_02800 PF04273 Putative phosphatase (DUF442) CFH90_02800 PF00753 Metallo-beta-lactamase superfamily CFH90_02810 PF00085 Thioredoxin CFH90_02815 PF03061 Thioesterase superfamily CFH90_02830 PF04461 Protein of unknown function (DUF520) CFH90_02840 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CFH90_02840 PF01266 FAD dependent oxidoreductase CFH90_02850 PF03795 YCII-related domain CFH90_02855 PF04279 Intracellular septation protein A CFH90_02860 PF02811 PHP domain CFH90_02865 PF01062 Bestrophin, RFP-TM, chloride channel CFH90_02870 PF04002 RadC-like JAB domain CFH90_02875 PF02441 Flavoprotein CFH90_02875 PF04127 DNA / pantothenate metabolism flavoprotein CFH90_02885 PF02556 Preprotein translocase subunit SecB CFH90_02890 PF00462 Glutaredoxin CFH90_02900 PF03193 RsgA GTPase CFH90_02905 PF00929 Exonuclease CFH90_02930 PF02321 Outer membrane efflux protein CFH90_02935 PF00005 ABC transporter CFH90_02935 PF02687 FtsX-like permease family CFH90_02935 PF12704 MacB-like periplasmic core domain CFH90_02940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFH90_02955 PF09334 tRNA synthetases class I (M) CFH90_02955 PF08264 Anticodon-binding domain of tRNA CFH90_02955 PF13603 Leucyl-tRNA synthetase, Domain 2 CFH90_02955 PF00133 tRNA synthetases class I (I, L, M and V) CFH90_02965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CFH90_02965 PF00205 Thiamine pyrophosphate enzyme, central domain CFH90_02965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CFH90_02970 PF10369 Small subunit of acetolactate synthase CFH90_02975 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CFH90_02975 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CFH90_02980 PF13737 Transposase DDE domain CFH90_03015 PF00534 Glycosyl transferases group 1 CFH90_03015 PF13439 Glycosyltransferase Family 4 CFH90_03020 PF01569 PAP2 superfamily CFH90_03025 PF04384 Iron-sulphur cluster assembly CFH90_03030 PF00334 Nucleoside diphosphate kinase CFH90_03035 PF04055 Radical SAM superfamily CFH90_03045 PF13464 Domain of unknown function (DUF4115) CFH90_03050 PF04551 GcpE protein CFH90_03055 PF03129 Anticodon binding domain CFH90_03055 PF13393 Histidyl-tRNA synthetase CFH90_03065 PF01011 PQQ enzyme repeat CFH90_03065 PF13360 PQQ-like domain CFH90_03070 PF01926 50S ribosome-binding GTPase CFH90_03070 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CFH90_03075 PF01648 4'-phosphopantetheinyl transferase superfamily CFH90_03080 PF02355 Protein export membrane protein CFH90_03080 PF07549 SecD/SecF GG Motif CFH90_03085 PF02355 Protein export membrane protein CFH90_03085 PF13721 SecD export protein N-terminal TM region CFH90_03085 PF07549 SecD/SecF GG Motif CFH90_03090 PF02699 Preprotein translocase subunit CFH90_03095 PF01702 Queuine tRNA-ribosyltransferase CFH90_03100 PF04011 LemA family CFH90_03110 PF02547 Queuosine biosynthesis protein CFH90_03125 PF00512 His Kinase A (phospho-acceptor) domain CFH90_03125 PF13426 PAS domain CFH90_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_03125 PF00672 HAMP domain CFH90_03130 PF03710 Glutamate-ammonia ligase adenylyltransferase CFH90_03130 PF08335 GlnD PII-uridylyltransferase CFH90_03135 PF01063 Amino-transferase class IV CFH90_03140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFH90_03140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFH90_03150 PF17102 Stealth protein CR3, conserved region 3 CFH90_03150 PF11380 Stealth protein CR2, conserved region 2 CFH90_03150 PF17101 Stealth protein CR1, conserved region 1 CFH90_03160 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CFH90_03200 PF00152 tRNA synthetases class II (D, K and N) CFH90_03200 PF01336 OB-fold nucleic acid binding domain CFH90_03200 PF02938 GAD domain CFH90_03210 PF00593 TonB dependent receptor CFH90_03210 PF07715 TonB-dependent Receptor Plug Domain CFH90_03230 PF06146 Phosphate-starvation-inducible E CFH90_03240 PF07963 Prokaryotic N-terminal methylation motif CFH90_03240 PF00114 Pilin (bacterial filament) CFH90_03245 PF07963 Prokaryotic N-terminal methylation motif CFH90_03245 PF00114 Pilin (bacterial filament) CFH90_03265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_03265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_03265 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_03265 PF12806 Acetyl-CoA dehydrogenase C-terminal like CFH90_03270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_03270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_03270 PF12806 Acetyl-CoA dehydrogenase C-terminal like CFH90_03270 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_03280 PF00512 His Kinase A (phospho-acceptor) domain CFH90_03280 PF00672 HAMP domain CFH90_03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_03285 PF00072 Response regulator receiver domain CFH90_03285 PF00486 Transcriptional regulatory protein, C terminal CFH90_03290 PF00324 Amino acid permease CFH90_03295 PF04237 YjbR CFH90_03300 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CFH90_03320 PF01923 Cobalamin adenosyltransferase CFH90_03325 PF07715 TonB-dependent Receptor Plug Domain CFH90_03325 PF00593 TonB dependent receptor CFH90_03330 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CFH90_03335 PF00291 Pyridoxal-phosphate dependent enzyme CFH90_03350 PF11893 Domain of unknown function (DUF3413) CFH90_03350 PF00884 Sulfatase CFH90_03360 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CFH90_03360 PF12833 Helix-turn-helix domain CFH90_03370 PF00290 Tryptophan synthase alpha chain CFH90_03375 PF01039 Carboxyl transferase domain CFH90_03380 PF08245 Mur ligase middle domain CFH90_03380 PF02875 Mur ligase family, glutamate ligase domain CFH90_03395 PF00753 Metallo-beta-lactamase superfamily CFH90_03400 PF10417 C-terminal domain of 1-Cys peroxiredoxin CFH90_03400 PF00578 AhpC/TSA family CFH90_03410 PF07516 SecA Wing and Scaffold domain CFH90_03410 PF01043 SecA preprotein cross-linking domain CFH90_03410 PF07517 SecA DEAD-like domain CFH90_03410 PF02810 SEC-C motif CFH90_03420 PF01960 ArgJ family CFH90_03425 PF02445 Quinolinate synthetase A protein CFH90_03455 PF17152 Periplasmic sensor domain CFH90_03455 PF00990 Diguanylate cyclase, GGDEF domain CFH90_03460 PF13689 YfiR/HmsC-like CFH90_03490 PF07690 Major Facilitator Superfamily CFH90_03515 PF01965 DJ-1/PfpI family CFH90_03535 PF04552 Sigma-54, DNA binding domain CFH90_03535 PF00309 Sigma-54 factor, Activator interacting domain (AID) CFH90_03535 PF04963 Sigma-54 factor, core binding domain CFH90_03540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CFH90_03545 PF01722 BolA-like protein CFH90_03550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFH90_03555 PF01634 ATP phosphoribosyltransferase CFH90_03565 PF00815 Histidinol dehydrogenase CFH90_03570 PF00155 Aminotransferase class I and II CFH90_03575 PF04715 Anthranilate synthase component I, N terminal region CFH90_03575 PF00425 chorismate binding enzyme CFH90_03630 PF00293 NUDIX domain CFH90_03635 PF00132 Bacterial transferase hexapeptide (six repeats) CFH90_03640 PF00814 Glycoprotease family CFH90_03645 PF02673 Bacitracin resistance protein BacA CFH90_03650 PF04445 Putative SAM-dependent methyltransferase CFH90_03660 PF00756 Putative esterase CFH90_03680 PF00834 Ribulose-phosphate 3 epimerase family CFH90_03715 PF00893 Small Multidrug Resistance protein CFH90_03720 PF00893 Small Multidrug Resistance protein CFH90_03725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CFH90_03725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFH90_03730 PF08378 Nuclease-related domain CFH90_03735 PF08543 Phosphomethylpyrimidine kinase CFH90_03740 PF13419 Haloacid dehalogenase-like hydrolase CFH90_03750 PF01037 Lrp/AsnC ligand binding domain CFH90_03755 PF01266 FAD dependent oxidoreductase CFH90_03760 PF01168 Alanine racemase, N-terminal domain CFH90_03760 PF00842 Alanine racemase, C-terminal domain CFH90_03765 PF01042 Endoribonuclease L-PSP CFH90_03770 PF00324 Amino acid permease CFH90_03785 PF02801 Beta-ketoacyl synthase, C-terminal domain CFH90_03785 PF00109 Beta-ketoacyl synthase, N-terminal domain CFH90_03795 PF00164 Ribosomal protein S12/S23 CFH90_03800 PF00177 Ribosomal protein S7p/S5e CFH90_03805 PF14492 Elongation Factor G, domain II CFH90_03805 PF03764 Elongation factor G, domain IV CFH90_03805 PF00679 Elongation factor G C-terminus CFH90_03805 PF00009 Elongation factor Tu GTP binding domain CFH90_03805 PF03144 Elongation factor Tu domain 2 CFH90_03810 PF03143 Elongation factor Tu C-terminal domain CFH90_03810 PF00009 Elongation factor Tu GTP binding domain CFH90_03810 PF03144 Elongation factor Tu domain 2 CFH90_03820 PF00583 Acetyltransferase (GNAT) family CFH90_03825 PF04376 Arginine-tRNA-protein transferase, N terminus CFH90_03825 PF04377 Arginine-tRNA-protein transferase, C terminus CFH90_03830 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CFH90_03835 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_03840 PF01580 FtsK/SpoIIIE family CFH90_03840 PF09397 Ftsk gamma domain CFH90_03840 PF17854 FtsK alpha domain CFH90_03840 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CFH90_03855 PF03776 Septum formation topological specificity factor MinE CFH90_03860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CFH90_03865 PF03775 Septum formation inhibitor MinC, C-terminal domain CFH90_03875 PF01553 Acyltransferase CFH90_03880 PF13488 Glycine zipper CFH90_03880 PF00691 OmpA family CFH90_03885 PF00580 UvrD/REP helicase N-terminal domain CFH90_03885 PF13361 UvrD-like helicase C-terminal domain CFH90_03890 PF00692 dUTPase CFH90_03895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFH90_03895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFH90_03895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFH90_03895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFH90_03900 PF00696 Amino acid kinase family CFH90_03905 PF13230 Glutamine amidotransferases class-II CFH90_03910 PF01814 Hemerythrin HHE cation binding domain CFH90_03920 PF03658 RnfH family Ubiquitin CFH90_03925 PF04355 SmpA / OmlA family CFH90_03930 PF01475 Ferric uptake regulator family CFH90_03935 PF00437 Type II/IV secretion system protein CFH90_03940 PF00437 Type II/IV secretion system protein CFH90_03945 PF01168 Alanine racemase, N-terminal domain CFH90_03960 PF12320 Type 5 capsule protein repressor C-terminal domain CFH90_03960 PF00149 Calcineurin-like phosphoesterase CFH90_03965 PF01590 GAF domain CFH90_03965 PF00563 EAL domain CFH90_03965 PF00990 Diguanylate cyclase, GGDEF domain CFH90_03965 PF00360 Phytochrome region CFH90_03975 PF08338 Domain of unknown function (DUF1731) CFH90_03975 PF01370 NAD dependent epimerase/dehydratase family CFH90_03980 PF01266 FAD dependent oxidoreductase CFH90_03985 PF00490 Delta-aminolevulinic acid dehydratase CFH90_03990 PF03061 Thioesterase superfamily CFH90_03995 PF00529 HlyD membrane-fusion protein of T1SS CFH90_03995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFH90_04000 PF07690 Major Facilitator Superfamily CFH90_04005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CFH90_04005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CFH90_04015 PF00589 Phage integrase family CFH90_04015 PF13356 Arm DNA-binding domain CFH90_04035 PF02498 BRO family, N-terminal domain CFH90_04035 PF10548 P22AR C-terminal domain CFH90_04065 PF00436 Single-strand binding protein family CFH90_04095 PF13356 Arm DNA-binding domain CFH90_04095 PF00589 Phage integrase family CFH90_04160 PF13359 DDE superfamily endonuclease CFH90_04160 PF13613 Helix-turn-helix of DDE superfamily endonuclease CFH90_04180 PF13784 Fic/DOC family N-terminal CFH90_04180 PF02661 Fic/DOC family CFH90_04190 PF02661 Fic/DOC family CFH90_04190 PF13784 Fic/DOC family N-terminal CFH90_04205 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_04205 PF00107 Zinc-binding dehydrogenase CFH90_04210 PF00106 short chain dehydrogenase CFH90_04215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_04215 PF03466 LysR substrate binding domain CFH90_04220 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_04220 PF00107 Zinc-binding dehydrogenase CFH90_04225 PF08659 KR domain CFH90_04225 PF02801 Beta-ketoacyl synthase, C-terminal domain CFH90_04225 PF00550 Phosphopantetheine attachment site CFH90_04225 PF14765 Polyketide synthase dehydratase CFH90_04225 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_04225 PF00698 Acyl transferase domain CFH90_04225 PF00109 Beta-ketoacyl synthase, N-terminal domain CFH90_04225 PF16197 Ketoacyl-synthetase C-terminal extension CFH90_04230 PF02583 Metal-sensitive transcriptional repressor CFH90_04235 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_04235 PF00107 Zinc-binding dehydrogenase CFH90_04240 PF00756 Putative esterase CFH90_04250 PF00465 Iron-containing alcohol dehydrogenase CFH90_04260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFH90_04270 PF00440 Bacterial regulatory proteins, tetR family CFH90_04270 PF16925 Tetracyclin repressor-like, C-terminal domain CFH90_04275 PF00107 Zinc-binding dehydrogenase CFH90_04275 PF16884 N-terminal domain of oxidoreductase CFH90_04285 PF04151 Bacterial pre-peptidase C-terminal domain CFH90_04295 PF13737 Transposase DDE domain CFH90_04305 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFH90_04305 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFH90_04310 PF03788 LrgA family CFH90_04315 PF04172 LrgB-like family CFH90_04325 PF00392 Bacterial regulatory proteins, gntR family CFH90_04325 PF00155 Aminotransferase class I and II CFH90_04335 PF02322 Cytochrome bd terminal oxidase subunit II CFH90_04340 PF01654 Cytochrome bd terminal oxidase subunit I CFH90_04355 PF00324 Amino acid permease CFH90_04360 PF00392 Bacterial regulatory proteins, gntR family CFH90_04360 PF00155 Aminotransferase class I and II CFH90_04365 PF00202 Aminotransferase class-III CFH90_04370 PF00171 Aldehyde dehydrogenase family CFH90_04375 PF13737 Transposase DDE domain CFH90_04385 PF04958 Arginine N-succinyltransferase beta subunit CFH90_04390 PF00171 Aldehyde dehydrogenase family CFH90_04395 PF04996 Succinylarginine dihydrolase CFH90_04400 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CFH90_04405 PF00324 Amino acid permease CFH90_04410 PF00842 Alanine racemase, C-terminal domain CFH90_04410 PF01168 Alanine racemase, N-terminal domain CFH90_04415 PF01614 Bacterial transcriptional regulator CFH90_04415 PF09339 IclR helix-turn-helix domain CFH90_04420 PF01144 Coenzyme A transferase CFH90_04425 PF01144 Coenzyme A transferase CFH90_04430 PF02803 Thiolase, C-terminal domain CFH90_04430 PF00108 Thiolase, N-terminal domain CFH90_04435 PF00206 Lyase CFH90_04435 PF10397 Adenylosuccinate lyase C-terminus CFH90_04440 PF00561 alpha/beta hydrolase fold CFH90_04445 PF07690 Major Facilitator Superfamily CFH90_04450 PF02627 Carboxymuconolactone decarboxylase family CFH90_04455 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CFH90_04455 PF00775 Dioxygenase CFH90_04460 PF00775 Dioxygenase CFH90_04465 PF01487 Type I 3-dehydroquinase CFH90_04470 PF05048 Periplasmic copper-binding protein (NosD) CFH90_04475 PF04966 Carbohydrate-selective porin, OprB family CFH90_04480 PF01011 PQQ enzyme repeat CFH90_04480 PF13360 PQQ-like domain CFH90_04485 PF07715 TonB-dependent Receptor Plug Domain CFH90_04485 PF00593 TonB dependent receptor CFH90_04495 PF01144 Coenzyme A transferase CFH90_04500 PF01144 Coenzyme A transferase CFH90_04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_04505 PF03466 LysR substrate binding domain CFH90_04530 PF05992 SbmA/BacA-like family CFH90_04575 PF02637 GatB domain CFH90_04575 PF02934 GatB/GatE catalytic domain CFH90_04580 PF01425 Amidase CFH90_04585 PF02686 Glu-tRNAGln amidotransferase C subunit CFH90_04595 PF04085 rod shape-determining protein MreC CFH90_04600 PF04093 rod shape-determining protein MreD CFH90_04605 PF02545 Maf-like protein CFH90_04610 PF00575 S1 RNA binding domain CFH90_04610 PF10150 Ribonuclease E/G family CFH90_04620 PF06974 Protein of unknown function (DUF1298) CFH90_04620 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CFH90_04625 PF01507 Phosphoadenosine phosphosulfate reductase family CFH90_04645 PF12833 Helix-turn-helix domain CFH90_04645 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CFH90_04650 PF00171 Aldehyde dehydrogenase family CFH90_04655 PF05199 GMC oxidoreductase CFH90_04660 PF03960 ArsC family CFH90_04665 PF01022 Bacterial regulatory protein, arsR family CFH90_04675 PF01758 Sodium Bile acid symporter family CFH90_04680 PF03358 NADPH-dependent FMN reductase CFH90_04695 PF14497 Glutathione S-transferase, C-terminal domain CFH90_04695 PF02798 Glutathione S-transferase, N-terminal domain CFH90_04710 PF00155 Aminotransferase class I and II CFH90_04715 PF00324 Amino acid permease CFH90_04720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFH90_04740 PF00324 Amino acid permease CFH90_04745 PF04303 PrpF protein CFH90_04750 PF00348 Polyprenyl synthetase CFH90_04755 PF01145 SPFH domain / Band 7 family CFH90_04765 PF01734 Patatin-like phospholipase CFH90_04785 PF08019 Phosphoethanolamine transferase EptA/EptB CFH90_04785 PF00884 Sulfatase CFH90_04790 PF00072 Response regulator receiver domain CFH90_04790 PF00486 Transcriptional regulatory protein, C terminal CFH90_04795 PF00512 His Kinase A (phospho-acceptor) domain CFH90_04795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_04795 PF08521 Two-component sensor kinase N-terminal CFH90_04810 PF00909 Ammonium Transporter Family CFH90_04815 PF00194 Eukaryotic-type carbonic anhydrase CFH90_04820 PF00005 ABC transporter CFH90_04825 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_04830 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_04835 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFH90_04850 PF05552 Conserved TM helix CFH90_04865 PF00291 Pyridoxal-phosphate dependent enzyme CFH90_04870 PF13533 Biotin-lipoyl like CFH90_04895 PF06100 MCRA family CFH90_04905 PF03783 Curli production assembly/transport component CsgG CFH90_04915 PF05643 Putative bacterial lipoprotein (DUF799) CFH90_04920 PF16123 Hydroxyacylglutathione hydrolase C-terminus CFH90_04920 PF00753 Metallo-beta-lactamase superfamily CFH90_04930 PF09334 tRNA synthetases class I (M) CFH90_04930 PF01588 Putative tRNA binding domain CFH90_04950 PF10609 NUBPL iron-transfer P-loop NTPase CFH90_04965 PF16868 NMT1-like family CFH90_04975 PF00692 dUTPase CFH90_05000 PF04073 Aminoacyl-tRNA editing domain CFH90_05000 PF03129 Anticodon binding domain CFH90_05000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFH90_05005 PF00873 AcrB/AcrD/AcrF family CFH90_05020 PF00072 Response regulator receiver domain CFH90_05025 PF00072 Response regulator receiver domain CFH90_05030 PF01584 CheW-like domain CFH90_05035 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CFH90_05035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CFH90_05040 PF02895 Signal transducing histidine kinase, homodimeric domain CFH90_05040 PF01584 CheW-like domain CFH90_05040 PF01627 Hpt domain CFH90_05040 PF07194 P2 response regulator binding domain CFH90_05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_05040 PF07194 P2 response regulator binding domain CFH90_05040 PF01627 Hpt domain CFH90_05040 PF02895 Signal transducing histidine kinase, homodimeric domain CFH90_05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_05040 PF01584 CheW-like domain CFH90_05050 PF01546 Peptidase family M20/M25/M40 CFH90_05050 PF07687 Peptidase dimerisation domain CFH90_05055 PF08085 Entericidin EcnA/B family CFH90_05065 PF04304 Protein of unknown function (DUF454) CFH90_05075 PF13340 Putative transposase of IS4/5 family (DUF4096) CFH90_05140 PF00258 Flavodoxin CFH90_05140 PF00175 Oxidoreductase NAD-binding domain CFH90_05140 PF00667 FAD binding domain CFH90_05150 PF12805 FUSC-like inner membrane protein yccS CFH90_05155 PF07690 Major Facilitator Superfamily CFH90_05170 PF03616 Sodium/glutamate symporter CFH90_05175 PF01235 Sodium:alanine symporter family CFH90_05180 PF02417 Chromate transporter CFH90_05185 PF01734 Patatin-like phospholipase CFH90_05195 PF03061 Thioesterase superfamily CFH90_05205 PF07683 Cobalamin synthesis protein cobW C-terminal domain CFH90_05205 PF02492 CobW/HypB/UreG, nucleotide-binding domain CFH90_05210 PF07152 YaeQ protein CFH90_05215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFH90_05220 PF00990 Diguanylate cyclase, GGDEF domain CFH90_05260 PF04973 Nicotinamide mononucleotide transporter CFH90_05275 PF08946 Osmosensory transporter coiled coil CFH90_05275 PF00083 Sugar (and other) transporter CFH90_05280 PF01327 Polypeptide deformylase CFH90_05285 PF02311 AraC-like ligand binding domain CFH90_05285 PF12833 Helix-turn-helix domain CFH90_05290 PF13737 Transposase DDE domain CFH90_05300 PF02607 B12 binding domain CFH90_05300 PF00809 Pterin binding enzyme CFH90_05300 PF02574 Homocysteine S-methyltransferase CFH90_05300 PF02310 B12 binding domain CFH90_05300 PF02965 Vitamin B12 dependent methionine synthase, activation domain CFH90_05305 PF01384 Phosphate transporter family CFH90_05325 PF01106 NifU-like domain CFH90_05325 PF01521 Iron-sulphur cluster biosynthesis CFH90_05330 PF07715 TonB-dependent Receptor Plug Domain CFH90_05330 PF00593 TonB dependent receptor CFH90_05340 PF00561 alpha/beta hydrolase fold CFH90_05345 PF00484 Carbonic anhydrase CFH90_05350 PF13472 GDSL-like Lipase/Acylhydrolase family CFH90_05355 PF00005 ABC transporter CFH90_05365 PF01694 Rhomboid family CFH90_05370 PF00912 Transglycosylase CFH90_05375 PF17941 Polyphosphate kinase C-terminal domain 1 CFH90_05375 PF02503 Polyphosphate kinase middle domain CFH90_05375 PF13089 Polyphosphate kinase N-terminal domain CFH90_05375 PF13090 Polyphosphate kinase C-terminal domain 2 CFH90_05380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_05380 PF03466 LysR substrate binding domain CFH90_05385 PF00561 alpha/beta hydrolase fold CFH90_05390 PF18113 Rubredoxin binding C-terminal domain CFH90_05390 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_05395 PF00301 Rubredoxin CFH90_05400 PF00156 Phosphoribosyl transferase domain CFH90_05410 PF01336 OB-fold nucleic acid binding domain CFH90_05410 PF00152 tRNA synthetases class II (D, K and N) CFH90_05415 PF14052 Capsule assembly protein Wzi CFH90_05420 PF01507 Phosphoadenosine phosphosulfate reductase family CFH90_05425 PF00009 Elongation factor Tu GTP binding domain CFH90_05430 PF13737 Transposase DDE domain CFH90_05440 PF00550 Phosphopantetheine attachment site CFH90_05440 PF16197 Ketoacyl-synthetase C-terminal extension CFH90_05440 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_05440 PF14765 Polyketide synthase dehydratase CFH90_05440 PF02801 Beta-ketoacyl synthase, C-terminal domain CFH90_05440 PF08659 KR domain CFH90_05440 PF00698 Acyl transferase domain CFH90_05440 PF00109 Beta-ketoacyl synthase, N-terminal domain CFH90_05465 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CFH90_05465 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CFH90_05480 PF00083 Sugar (and other) transporter CFH90_05485 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CFH90_05485 PF01266 FAD dependent oxidoreductase CFH90_05495 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CFH90_05495 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CFH90_05500 PF00781 Diacylglycerol kinase catalytic domain CFH90_05510 PF00166 Chaperonin 10 Kd subunit CFH90_05515 PF00118 TCP-1/cpn60 chaperonin family CFH90_05530 PF05593 RHS Repeat CFH90_05530 PF03527 RHS protein CFH90_05545 PF13186 Iron-sulfur cluster-binding domain CFH90_05545 PF04055 Radical SAM superfamily CFH90_05550 PF00884 Sulfatase CFH90_05565 PF13358 DDE superfamily endonuclease CFH90_05570 PF01553 Acyltransferase CFH90_05590 PF00905 Penicillin binding protein transpeptidase domain CFH90_05590 PF03717 Penicillin-binding Protein dimerisation domain CFH90_05605 PF05191 Adenylate kinase, active site lid CFH90_05615 PF10576 Iron-sulfur binding domain of endonuclease III CFH90_05615 PF00633 Helix-hairpin-helix motif CFH90_05615 PF00730 HhH-GPD superfamily base excision DNA repair protein CFH90_05620 PF04060 Putative Fe-S cluster CFH90_05625 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CFH90_05625 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CFH90_05635 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CFH90_05640 PF02590 Predicted SPOUT methyltransferase CFH90_05645 PF04389 Peptidase family M28 CFH90_05655 PF02190 ATP-dependent protease La (LON) substrate-binding domain CFH90_05655 PF05362 Lon protease (S16) C-terminal proteolytic domain CFH90_05655 PF00004 ATPase family associated with various cellular activities (AAA) CFH90_05660 PF01812 5-formyltetrahydrofolate cyclo-ligase family CFH90_05665 PF13411 MerR HTH family regulatory protein CFH90_05675 PF03466 LysR substrate binding domain CFH90_05675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_05680 PF01566 Natural resistance-associated macrophage protein CFH90_05685 PF03746 LamB/YcsF family CFH90_05690 PF07286 Protein of unknown function (DUF1445) CFH90_05700 PF00289 Biotin carboxylase, N-terminal domain CFH90_05700 PF00364 Biotin-requiring enzyme CFH90_05700 PF02785 Biotin carboxylase C-terminal domain CFH90_05700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFH90_05720 PF03695 Uncharacterised protein family (UPF0149) CFH90_05725 PF05195 Aminopeptidase P, N-terminal domain CFH90_05725 PF00557 Metallopeptidase family M24 CFH90_05835 PF01494 FAD binding domain CFH90_05840 PF01494 FAD binding domain CFH90_05855 PF08328 Adenylosuccinate lyase C-terminal CFH90_05855 PF00206 Lyase CFH90_05860 PF04356 Protein of unknown function (DUF489) CFH90_05870 PF00293 NUDIX domain CFH90_05880 PF00132 Bacterial transferase hexapeptide (six repeats) CFH90_05885 PF00768 D-alanyl-D-alanine carboxypeptidase CFH90_05885 PF07943 Penicillin-binding protein 5, C-terminal domain CFH90_05920 PF00199 Catalase CFH90_05930 PF01975 Survival protein SurE CFH90_05935 PF01476 LysM domain CFH90_05935 PF01551 Peptidase family M23 CFH90_05940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_05940 PF03466 LysR substrate binding domain CFH90_05945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFH90_05950 PF02021 Uncharacterised protein family UPF0102 CFH90_05955 PF04972 BON domain CFH90_05960 PF07859 alpha/beta hydrolase fold CFH90_05965 PF09297 NADH pyrophosphatase zinc ribbon domain CFH90_05965 PF00293 NUDIX domain CFH90_05975 PF00929 Exonuclease CFH90_05980 PF01476 LysM domain CFH90_05980 PF01464 Transglycosylase SLT domain CFH90_05985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CFH90_05990 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_05995 PF12911 N-terminal TM domain of oligopeptide transport permease C CFH90_05995 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_06000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFH90_06000 PF00005 ABC transporter CFH90_06005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFH90_06005 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_06015 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CFH90_06040 PF00324 Amino acid permease CFH90_06075 PF00929 Exonuclease CFH90_06080 PF01979 Amidohydrolase family CFH90_06085 PF01590 GAF domain CFH90_06085 PF00990 Diguanylate cyclase, GGDEF domain CFH90_06085 PF00360 Phytochrome region CFH90_06085 PF00563 EAL domain CFH90_06090 PF00764 Arginosuccinate synthase CFH90_06095 PF02652 L-lactate permease CFH90_06100 PF07729 FCD domain CFH90_06100 PF00392 Bacterial regulatory proteins, gntR family CFH90_06105 PF01070 FMN-dependent dehydrogenase CFH90_06110 PF01565 FAD binding domain CFH90_06110 PF09330 D-lactate dehydrogenase, membrane binding CFH90_06115 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_06115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFH90_06130 PF11890 Domain of unknown function (DUF3410) CFH90_06130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFH90_06130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFH90_06135 PF00152 tRNA synthetases class II (D, K and N) CFH90_06140 PF01743 Poly A polymerase head domain CFH90_06140 PF12627 Probable RNA and SrmB- binding site of polymerase A CFH90_06145 PF03949 Malic enzyme, NAD binding domain CFH90_06145 PF00390 Malic enzyme, N-terminal domain CFH90_06145 PF01515 Phosphate acetyl/butaryl transferase CFH90_06150 PF00990 Diguanylate cyclase, GGDEF domain CFH90_06150 PF03707 Bacterial signalling protein N terminal repeat CFH90_06150 PF00563 EAL domain CFH90_06155 PF04452 RNA methyltransferase CFH90_06160 PF02219 Methylenetetrahydrofolate reductase CFH90_06165 PF05221 S-adenosyl-L-homocysteine hydrolase CFH90_06165 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CFH90_06205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_06205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_06205 PF09317 Domain of unknown function (DUF1974) CFH90_06205 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_06210 PF04055 Radical SAM superfamily CFH90_06215 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_06215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFH90_06225 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CFH90_06240 PF12704 MacB-like periplasmic core domain CFH90_06240 PF02687 FtsX-like permease family CFH90_06245 PF00005 ABC transporter CFH90_06250 PF03772 Competence protein CFH90_06250 PF13567 Domain of unknown function (DUF4131) CFH90_06250 PF00753 Metallo-beta-lactamase superfamily CFH90_06260 PF06965 Na+/H+ antiporter 1 CFH90_06260 PF01343 Peptidase family S49 CFH90_06270 PF00551 Formyl transferase CFH90_06275 PF00586 AIR synthase related protein, N-terminal domain CFH90_06275 PF02769 AIR synthase related protein, C-terminal domain CFH90_06280 PF01594 AI-2E family transporter CFH90_06285 PF11638 DnaA N-terminal domain CFH90_06285 PF00308 Bacterial dnaA protein CFH90_06285 PF08299 Bacterial dnaA protein helix-turn-helix CFH90_06315 PF00588 SpoU rRNA Methylase family CFH90_06315 PF08032 RNA 2'-O ribose methyltransferase substrate binding CFH90_06320 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CFH90_06330 PF00691 OmpA family CFH90_06335 PF04052 TolB amino-terminal domain CFH90_06335 PF07676 WD40-like Beta Propeller Repeat CFH90_06345 PF02472 Biopolymer transport protein ExbD/TolR CFH90_06350 PF01618 MotA/TolQ/ExbB proton channel family CFH90_06355 PF03061 Thioesterase superfamily CFH90_06365 PF03069 Acetamidase/Formamidase family CFH90_06370 PF05491 RuvB C-terminal winged helix domain CFH90_06370 PF17864 RuvB AAA lid domain CFH90_06370 PF05496 Holliday junction DNA helicase RuvB P-loop domain CFH90_06375 PF07499 RuvA, C-terminal domain CFH90_06375 PF01330 RuvA N terminal domain CFH90_06380 PF01966 HD domain CFH90_06390 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CFH90_06390 PF02769 AIR synthase related protein, C-terminal domain CFH90_06390 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CFH90_06400 PF01784 NIF3 (NGG1p interacting factor 3) CFH90_06415 PF00881 Nitroreductase family CFH90_06420 PF00378 Enoyl-CoA hydratase/isomerase CFH90_06425 PF00293 NUDIX domain CFH90_06425 PF01467 Cytidylyltransferase-like CFH90_06430 PF04264 YceI-like domain CFH90_06435 PF03466 LysR substrate binding domain CFH90_06435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_06440 PF01810 LysE type translocator CFH90_06445 PF00578 AhpC/TSA family CFH90_06460 PF06508 Queuosine biosynthesis protein QueC CFH90_06465 PF04055 Radical SAM superfamily CFH90_06470 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CFH90_06470 PF14602 Hexapeptide repeat of succinyl-transferase CFH90_06470 PF00132 Bacterial transferase hexapeptide (six repeats) CFH90_06485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_06485 PF03466 LysR substrate binding domain CFH90_06490 PF00005 ABC transporter CFH90_06490 PF12857 TOBE-like domain CFH90_06495 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_06500 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_06520 PF02618 YceG-like family CFH90_06525 PF02223 Thymidylate kinase CFH90_06535 PF00890 FAD binding domain CFH90_06535 PF02910 Fumarate reductase flavoprotein C-term CFH90_06540 PF13180 PDZ domain CFH90_06545 PF13006 Insertion element 4 transposase N-terminal CFH90_06545 PF01609 Transposase DDE domain CFH90_06555 PF00679 Elongation factor G C-terminus CFH90_06555 PF03144 Elongation factor Tu domain 2 CFH90_06555 PF06421 GTP-binding protein LepA C-terminus CFH90_06555 PF00009 Elongation factor Tu GTP binding domain CFH90_06560 PF10502 Signal peptidase, peptidase S26 CFH90_06570 PF00035 Double-stranded RNA binding motif CFH90_06570 PF14622 Ribonuclease-III-like CFH90_06575 PF07650 KH domain CFH90_06575 PF01926 50S ribosome-binding GTPase CFH90_06585 PF02565 Recombination protein O C terminal CFH90_06585 PF11967 Recombination protein O N terminal CFH90_06590 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CFH90_06595 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CFH90_06620 PF00892 EamA-like transporter family CFH90_06635 PF00990 Diguanylate cyclase, GGDEF domain CFH90_06635 PF00563 EAL domain CFH90_06635 PF03707 Bacterial signalling protein N terminal repeat CFH90_06655 PF04851 Type III restriction enzyme, res subunit CFH90_06655 PF12344 Ultra-violet resistance protein B CFH90_06655 PF00271 Helicase conserved C-terminal domain CFH90_06655 PF17757 UvrB interaction domain CFH90_06655 PF02151 UvrB/uvrC motif CFH90_06665 PF00892 EamA-like transporter family CFH90_06670 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFH90_06670 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFH90_06695 PF05368 NmrA-like family CFH90_06700 PF01638 HxlR-like helix-turn-helix CFH90_06705 PF01018 GTP1/OBG CFH90_06705 PF01926 50S ribosome-binding GTPase CFH90_06710 PF00696 Amino acid kinase family CFH90_06710 PF01472 PUA domain CFH90_06715 PF01569 PAP2 superfamily CFH90_06720 PF07660 Secretin and TonB N terminus short domain CFH90_06720 PF07715 TonB-dependent Receptor Plug Domain CFH90_06720 PF00593 TonB dependent receptor CFH90_06730 PF00202 Aminotransferase class-III CFH90_06735 PF00282 Pyridoxal-dependent decarboxylase conserved domain CFH90_06740 PF12849 PBP superfamily domain CFH90_06745 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_06750 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_06755 PF00005 ABC transporter CFH90_06760 PF08496 Peptidase family S49 N-terminal CFH90_06760 PF01343 Peptidase family S49 CFH90_06765 PF00202 Aminotransferase class-III CFH90_06770 PF00462 Glutaredoxin CFH90_06775 PF05362 Lon protease (S16) C-terminal proteolytic domain CFH90_06775 PF13654 AAA domain CFH90_06780 PF07690 Major Facilitator Superfamily CFH90_06785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFH90_06790 PF13593 SBF-like CPA transporter family (DUF4137) CFH90_06795 PF01197 Ribosomal protein L31 CFH90_06810 PF04055 Radical SAM superfamily CFH90_06815 PF01132 Elongation factor P (EF-P) OB domain CFH90_06815 PF08207 Elongation factor P (EF-P) KOW-like domain CFH90_06815 PF09285 Elongation factor P, C-terminal CFH90_06820 PF13722 5TM C-terminal transporter carbon starvation CstA CFH90_06820 PF02554 Carbon starvation protein CstA CFH90_06825 PF04328 Selenoprotein, putative CFH90_06835 PF07726 ATPase family associated with various cellular activities (AAA) CFH90_06835 PF17863 AAA lid domain CFH90_06845 PF01841 Transglutaminase-like superfamily CFH90_06845 PF11992 Domain of unknown function (DUF3488) CFH90_06845 PF13559 Domain of unknown function (DUF4129) CFH90_06855 PF00589 Phage integrase family CFH90_06910 PF13817 IS66 C-terminal element CFH90_06910 PF13007 Transposase C of IS166 homeodomain CFH90_06910 PF13005 zinc-finger binding domain of transposase IS66 CFH90_06910 PF03050 Transposase IS66 family CFH90_06930 PF09828 Chromate resistance exported protein CFH90_06935 PF13737 Transposase DDE domain CFH90_06950 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CFH90_06955 PF00293 NUDIX domain CFH90_06955 PF09297 NADH pyrophosphatase zinc ribbon domain CFH90_06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_06995 PF08521 Two-component sensor kinase N-terminal CFH90_06995 PF00512 His Kinase A (phospho-acceptor) domain CFH90_07000 PF00072 Response regulator receiver domain CFH90_07000 PF00486 Transcriptional regulatory protein, C terminal CFH90_07020 PF03466 LysR substrate binding domain CFH90_07020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_07025 PF00291 Pyridoxal-phosphate dependent enzyme CFH90_07030 PF00290 Tryptophan synthase alpha chain CFH90_07035 PF00925 GTP cyclohydrolase II CFH90_07045 PF00210 Ferritin-like domain CFH90_07055 PF13737 Transposase DDE domain CFH90_07070 PF02417 Chromate transporter CFH90_07075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_07075 PF03466 LysR substrate binding domain CFH90_07090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFH90_07095 PF00005 ABC transporter CFH90_07110 PF00849 RNA pseudouridylate synthase CFH90_07115 PF18339 RapA N-terminal Tudor like domain 1 CFH90_07115 PF18337 RapA N-terminal Tudor like domain CFH90_07115 PF00176 SNF2 family N-terminal domain CFH90_07115 PF12137 RNA polymerase recycling family C-terminal CFH90_07115 PF00271 Helicase conserved C-terminal domain CFH90_07130 PF00440 Bacterial regulatory proteins, tetR family CFH90_07135 PF00970 Oxidoreductase FAD-binding domain CFH90_07135 PF00111 2Fe-2S iron-sulfur cluster binding domain CFH90_07135 PF00175 Oxidoreductase NAD-binding domain CFH90_07140 PF00487 Fatty acid desaturase CFH90_07155 PF07759 Protein of unknown function (DUF1615) CFH90_07175 PF00313 'Cold-shock' DNA-binding domain CFH90_07180 PF03050 Transposase IS66 family CFH90_07180 PF13007 Transposase C of IS166 homeodomain CFH90_07180 PF13005 zinc-finger binding domain of transposase IS66 CFH90_07180 PF13817 IS66 C-terminal element CFH90_07220 PF01638 HxlR-like helix-turn-helix CFH90_07235 PF13737 Transposase DDE domain CFH90_07245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFH90_07245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFH90_07255 PF01053 Cys/Met metabolism PLP-dependent enzyme CFH90_07260 PF02575 YbaB/EbfC DNA-binding family CFH90_07265 PF02132 RecR protein CFH90_07265 PF13662 Toprim domain CFH90_07270 PF00570 HRDC domain CFH90_07270 PF01612 3'-5' exonuclease CFH90_07275 PF05166 YcgL domain CFH90_07285 PF00004 ATPase family associated with various cellular activities (AAA) CFH90_07285 PF01434 Peptidase family M41 CFH90_07285 PF17862 AAA+ lid domain CFH90_07295 PF00291 Pyridoxal-phosphate dependent enzyme CFH90_07300 PF00478 IMP dehydrogenase / GMP reductase domain CFH90_07300 PF00571 CBS domain CFH90_07330 PF05193 Peptidase M16 inactive domain CFH90_07330 PF00675 Insulinase (Peptidase family M16) CFH90_07335 PF02881 SRP54-type protein, helical bundle domain CFH90_07335 PF00448 SRP54-type protein, GTPase domain CFH90_07340 PF13340 Putative transposase of IS4/5 family (DUF4096) CFH90_07355 PF07690 Major Facilitator Superfamily CFH90_07365 PF00107 Zinc-binding dehydrogenase CFH90_07365 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_07370 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CFH90_07375 PF05853 beta-keto acid cleavage enzyme CFH90_07380 PF07690 Major Facilitator Superfamily CFH90_07395 PF03601 Conserved hypothetical protein 698 CFH90_07425 PF13193 AMP-binding enzyme C-terminal domain CFH90_07425 PF00501 AMP-binding enzyme CFH90_07435 PF00285 Citrate synthase, C-terminal domain CFH90_07455 PF02542 YgbB family CFH90_07465 PF00793 DAHP synthetase I family CFH90_07470 PF01925 Sulfite exporter TauE/SafE CFH90_07495 PF02684 Lipid-A-disaccharide synthetase CFH90_07500 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CFH90_07500 PF18381 YcaO cyclodehydratase C-terminal domain CFH90_07505 PF12852 Cupin CFH90_07505 PF12833 Helix-turn-helix domain CFH90_07510 PF00487 Fatty acid desaturase CFH90_07515 PF04073 Aminoacyl-tRNA editing domain CFH90_07520 PF04183 IucA / IucC family CFH90_07520 PF06276 Ferric iron reductase FhuF-like transporter CFH90_07525 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CFH90_07530 PF04183 IucA / IucC family CFH90_07530 PF06276 Ferric iron reductase FhuF-like transporter CFH90_07545 PF07690 Major Facilitator Superfamily CFH90_07550 PF00593 TonB dependent receptor CFH90_07550 PF07715 TonB-dependent Receptor Plug Domain CFH90_07560 PF04172 LrgB-like family CFH90_07565 PF03788 LrgA family CFH90_07570 PF03466 LysR substrate binding domain CFH90_07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_07575 PF13419 Haloacid dehalogenase-like hydrolase CFH90_07580 PF01638 HxlR-like helix-turn-helix CFH90_07600 PF02635 DsrE/DsrF-like family CFH90_07605 PF16363 GDP-mannose 4,6 dehydratase CFH90_07610 PF10415 Fumarase C C-terminus CFH90_07610 PF00206 Lyase CFH90_07650 PF00106 short chain dehydrogenase CFH90_07655 PF06865 Pyrimidine/purine nucleoside phosphorylase CFH90_07675 PF13091 PLD-like domain CFH90_07680 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_07680 PF00107 Zinc-binding dehydrogenase CFH90_07690 PF00487 Fatty acid desaturase CFH90_07695 PF00563 EAL domain CFH90_07695 PF00990 Diguanylate cyclase, GGDEF domain CFH90_07695 PF03707 Bacterial signalling protein N terminal repeat CFH90_07700 PF00793 DAHP synthetase I family CFH90_07705 PF00437 Type II/IV secretion system protein CFH90_07710 PF07690 Major Facilitator Superfamily CFH90_07715 PF01597 Glycine cleavage H-protein CFH90_07720 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CFH90_07720 PF12833 Helix-turn-helix domain CFH90_07725 PF00664 ABC transporter transmembrane region CFH90_07725 PF00005 ABC transporter CFH90_07735 PF00924 Mechanosensitive ion channel CFH90_07740 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CFH90_07750 PF00375 Sodium:dicarboxylate symporter family CFH90_07755 PF00916 Sulfate permease family CFH90_07755 PF01740 STAS domain CFH90_07765 PF12697 Alpha/beta hydrolase family CFH90_07770 PF00296 Luciferase-like monooxygenase CFH90_07775 PF00857 Isochorismatase family CFH90_07780 PF01042 Endoribonuclease L-PSP CFH90_07785 PF01613 Flavin reductase like domain CFH90_07790 PF00860 Permease family CFH90_07795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFH90_07795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFH90_07800 PF00291 Pyridoxal-phosphate dependent enzyme CFH90_07825 PF00108 Thiolase, N-terminal domain CFH90_07825 PF02803 Thiolase, C-terminal domain CFH90_07830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_07830 PF03466 LysR substrate binding domain CFH90_07845 PF00289 Biotin carboxylase, N-terminal domain CFH90_07845 PF02785 Biotin carboxylase C-terminal domain CFH90_07845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFH90_07855 PF00289 Biotin carboxylase, N-terminal domain CFH90_07855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFH90_07855 PF02785 Biotin carboxylase C-terminal domain CFH90_07860 PF00364 Biotin-requiring enzyme CFH90_07865 PF01220 Dehydroquinase class II CFH90_07870 PF12146 Serine aminopeptidase, S33 CFH90_07875 PF00108 Thiolase, N-terminal domain CFH90_07875 PF02803 Thiolase, C-terminal domain CFH90_07880 PF01144 Coenzyme A transferase CFH90_07885 PF01144 Coenzyme A transferase CFH90_07890 PF03594 Benzoate membrane transport protein CFH90_07895 PF00106 short chain dehydrogenase CFH90_07900 PF00970 Oxidoreductase FAD-binding domain CFH90_07900 PF00175 Oxidoreductase NAD-binding domain CFH90_07900 PF00111 2Fe-2S iron-sulfur cluster binding domain CFH90_07905 PF00866 Ring hydroxylating beta subunit CFH90_07910 PF00355 Rieske [2Fe-2S] domain CFH90_07910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CFH90_07915 PF00775 Dioxygenase CFH90_07915 PF04444 Catechol dioxygenase N terminus CFH90_07920 PF02426 Muconolactone delta-isomerase CFH90_07925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFH90_07925 PF13378 Enolase C-terminal domain-like CFH90_07930 PF03466 LysR substrate binding domain CFH90_07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_07935 PF07690 Major Facilitator Superfamily CFH90_07950 PF00106 short chain dehydrogenase CFH90_07955 PF01545 Cation efflux family CFH90_07970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFH90_07970 PF00529 HlyD membrane-fusion protein of T1SS CFH90_07975 PF00873 AcrB/AcrD/AcrF family CFH90_07985 PF00593 TonB dependent receptor CFH90_07985 PF07715 TonB-dependent Receptor Plug Domain CFH90_07990 PF00593 TonB dependent receptor CFH90_07990 PF07715 TonB-dependent Receptor Plug Domain CFH90_07995 PF00106 short chain dehydrogenase CFH90_08000 PF00710 Asparaginase, N-terminal CFH90_08000 PF17763 Glutaminase/Asparaginase C-terminal domain CFH90_08015 PF13737 Transposase DDE domain CFH90_08105 PF13533 Biotin-lipoyl like CFH90_08110 PF07690 Major Facilitator Superfamily CFH90_08115 PF02321 Outer membrane efflux protein CFH90_08135 PF04055 Radical SAM superfamily CFH90_08140 PF00676 Dehydrogenase E1 component CFH90_08145 PF02779 Transketolase, pyrimidine binding domain CFH90_08145 PF02780 Transketolase, C-terminal domain CFH90_08150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFH90_08150 PF00364 Biotin-requiring enzyme CFH90_08150 PF02817 e3 binding domain CFH90_08155 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_08155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFH90_08165 PF00107 Zinc-binding dehydrogenase CFH90_08165 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_08170 PF09905 DNA-binding protein VF530 CFH90_08175 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CFH90_08180 PF07690 Major Facilitator Superfamily CFH90_08185 PF03466 LysR substrate binding domain CFH90_08185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_08190 PF03466 LysR substrate binding domain CFH90_08190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_08195 PF00248 Aldo/keto reductase family CFH90_08200 PF12146 Serine aminopeptidase, S33 CFH90_08215 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_08215 PF00107 Zinc-binding dehydrogenase CFH90_08235 PF07690 Major Facilitator Superfamily CFH90_08240 PF13737 Transposase DDE domain CFH90_08255 PF02583 Metal-sensitive transcriptional repressor CFH90_08265 PF02705 K+ potassium transporter CFH90_08270 PF02417 Chromate transporter CFH90_08275 PF09828 Chromate resistance exported protein CFH90_08280 PF13737 Transposase DDE domain CFH90_08350 PF01545 Cation efflux family CFH90_08355 PF01925 Sulfite exporter TauE/SafE CFH90_08360 PF01613 Flavin reductase like domain CFH90_08365 PF08267 Cobalamin-independent synthase, N-terminal domain CFH90_08365 PF01717 Cobalamin-independent synthase, Catalytic domain CFH90_08425 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB CFH90_08460 PF01545 Cation efflux family CFH90_08480 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CFH90_08485 PF00501 AMP-binding enzyme CFH90_08495 PF00027 Cyclic nucleotide-binding domain CFH90_08495 PF00520 Ion transport protein CFH90_08505 PF00005 ABC transporter CFH90_08510 PF13533 Biotin-lipoyl like CFH90_08515 PF02321 Outer membrane efflux protein CFH90_08525 PF00330 Aconitase family (aconitate hydratase) CFH90_08525 PF00694 Aconitase C-terminal domain CFH90_08545 PF00486 Transcriptional regulatory protein, C terminal CFH90_08545 PF00072 Response regulator receiver domain CFH90_08550 PF00512 His Kinase A (phospho-acceptor) domain CFH90_08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_08550 PF08521 Two-component sensor kinase N-terminal CFH90_08595 PF01022 Bacterial regulatory protein, arsR family CFH90_08600 PF03960 ArsC family CFH90_08650 PF12697 Alpha/beta hydrolase family CFH90_08655 PF00753 Metallo-beta-lactamase superfamily CFH90_08665 PF04143 Sulphur transport CFH90_08695 PF00005 ABC transporter CFH90_08710 PF00893 Small Multidrug Resistance protein CFH90_08720 PF08753 NikR C terminal nickel binding domain CFH90_08720 PF01402 Ribbon-helix-helix protein, copG family CFH90_08730 PF15887 Putative zinc-binding metallo-peptidase CFH90_08730 PF10005 zinc-ribbon domain CFH90_08755 PF12832 MFS_1 like family CFH90_08760 PF01425 Amidase CFH90_08765 PF00990 Diguanylate cyclase, GGDEF domain CFH90_08775 PF01266 FAD dependent oxidoreductase CFH90_08785 PF01264 Chorismate synthase CFH90_08790 PF05175 Methyltransferase small domain CFH90_08805 PF03109 ABC1 family CFH90_08810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_08810 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_08810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_08815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_08815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_08815 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_08870 PF13340 Putative transposase of IS4/5 family (DUF4096) CFH90_08880 PF01709 Transcriptional regulator CFH90_08900 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CFH90_08900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_08905 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CFH90_08905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_08910 PF00296 Luciferase-like monooxygenase CFH90_08915 PF03180 NLPA lipoprotein CFH90_08920 PF03180 NLPA lipoprotein CFH90_08925 PF09383 NIL domain CFH90_08925 PF00005 ABC transporter CFH90_08930 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_08940 PF06071 Protein of unknown function (DUF933) CFH90_08940 PF01926 50S ribosome-binding GTPase CFH90_08955 PF13545 Crp-like helix-turn-helix domain CFH90_08955 PF00027 Cyclic nucleotide-binding domain CFH90_08965 PF03591 AzlC protein CFH90_08970 PF05437 Branched-chain amino acid transport protein (AzlD) CFH90_08975 PF02222 ATP-grasp domain CFH90_08980 PF08335 GlnD PII-uridylyltransferase CFH90_08980 PF01909 Nucleotidyltransferase domain CFH90_08980 PF01966 HD domain CFH90_08985 PF00155 Aminotransferase class I and II CFH90_08990 PF00593 TonB dependent receptor CFH90_08990 PF07715 TonB-dependent Receptor Plug Domain CFH90_09015 PF00255 Glutathione peroxidase CFH90_09020 PF01641 SelR domain CFH90_09025 PF00155 Aminotransferase class I and II CFH90_09060 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_09060 PF13192 Thioredoxin domain CFH90_09085 PF03060 Nitronate monooxygenase CFH90_09090 PF01207 Dihydrouridine synthase (Dus) CFH90_09100 PF13737 Transposase DDE domain CFH90_09110 PF13737 Transposase DDE domain CFH90_09120 PF01230 HIT domain CFH90_09125 PF00267 Gram-negative porin CFH90_09150 PF00216 Bacterial DNA-binding protein CFH90_09165 PF02082 Transcriptional regulator CFH90_09170 PF00266 Aminotransferase class-V CFH90_09175 PF01592 NifU-like N terminal domain CFH90_09180 PF01521 Iron-sulphur cluster biosynthesis CFH90_09185 PF00226 DnaJ domain CFH90_09185 PF07743 HSCB C-terminal oligomerisation domain CFH90_09190 PF00012 Hsp70 protein CFH90_09195 PF00111 2Fe-2S iron-sulfur cluster binding domain CFH90_09200 PF00211 Adenylate and Guanylate cyclase catalytic domain CFH90_09210 PF00270 DEAD/DEAH box helicase CFH90_09210 PF02559 CarD-like/TRCF domain CFH90_09210 PF17757 UvrB interaction domain CFH90_09210 PF03461 TRCF domain CFH90_09210 PF00271 Helicase conserved C-terminal domain CFH90_09225 PF00474 Sodium:solute symporter family CFH90_09230 PF01037 Lrp/AsnC ligand binding domain CFH90_09235 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CFH90_09235 PF00171 Aldehyde dehydrogenase family CFH90_09235 PF01619 Proline dehydrogenase CFH90_09235 PF14850 DNA-binding domain of Proline dehydrogenase CFH90_09240 PF05958 tRNA (Uracil-5-)-methyltransferase CFH90_09270 PF01062 Bestrophin, RFP-TM, chloride channel CFH90_09275 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFH90_09275 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CFH90_09280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CFH90_09285 PF00149 Calcineurin-like phosphoesterase CFH90_09295 PF00881 Nitroreductase family CFH90_09310 PF01116 Fructose-bisphosphate aldolase class-II CFH90_09320 PF00162 Phosphoglycerate kinase CFH90_09330 PF02545 Maf-like protein CFH90_09340 PF08007 Cupin superfamily protein CFH90_09345 PF07730 Histidine kinase CFH90_09350 PF00196 Bacterial regulatory proteins, luxR family CFH90_09350 PF00072 Response regulator receiver domain CFH90_09355 PF01645 Conserved region in glutamate synthase CFH90_09370 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CFH90_09370 PF01565 FAD binding domain CFH90_09375 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFH90_09380 PF00465 Iron-containing alcohol dehydrogenase CFH90_09385 PF03061 Thioesterase superfamily CFH90_09390 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CFH90_09390 PF12169 DNA polymerase III subunits gamma and tau domain III CFH90_09390 PF12170 DNA polymerase III tau subunit V interacting with alpha CFH90_09415 PF02803 Thiolase, C-terminal domain CFH90_09415 PF00108 Thiolase, N-terminal domain CFH90_09430 PF03466 LysR substrate binding domain CFH90_09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_09435 PF00923 Transaldolase/Fructose-6-phosphate aldolase CFH90_09440 PF01810 LysE type translocator CFH90_09445 PF03594 Benzoate membrane transport protein CFH90_09450 PF00440 Bacterial regulatory proteins, tetR family CFH90_09455 PF00893 Small Multidrug Resistance protein CFH90_09460 PF00135 Carboxylesterase family CFH90_09470 PF00582 Universal stress protein family CFH90_09480 PF01433 Peptidase family M1 domain CFH90_09480 PF11940 Domain of unknown function (DUF3458) Ig-like fold CFH90_09480 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CFH90_09495 PF02110 Hydroxyethylthiazole kinase family CFH90_09505 PF03471 Transporter associated domain CFH90_09505 PF03741 Integral membrane protein TerC family CFH90_09525 PF01274 Malate synthase CFH90_09530 PF03969 AFG1-like ATPase CFH90_09540 PF00743 Flavin-binding monooxygenase-like CFH90_09545 PF03956 Lysine exporter LysO CFH90_09550 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CFH90_09560 PF00216 Bacterial DNA-binding protein CFH90_09565 PF00575 S1 RNA binding domain CFH90_09570 PF02224 Cytidylate kinase CFH90_09580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFH90_09590 PF03167 Uracil DNA glycosylase superfamily CFH90_09600 PF03934 Type II secretion system (T2SS), protein K CFH90_09605 PF11612 Type II secretion system (T2SS), protein J CFH90_09605 PF07963 Prokaryotic N-terminal methylation motif CFH90_09610 PF02501 Type II secretion system (T2SS), protein I CFH90_09610 PF07963 Prokaryotic N-terminal methylation motif CFH90_09615 PF07963 Prokaryotic N-terminal methylation motif CFH90_09625 PF01026 TatD related DNase CFH90_09635 PF09115 DNA polymerase III, delta subunit, C terminal CFH90_09640 PF02348 Cytidylyltransferase CFH90_09645 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CFH90_09650 PF00005 ABC transporter CFH90_09650 PF00664 ABC transporter transmembrane region CFH90_09660 PF01618 MotA/TolQ/ExbB proton channel family CFH90_09665 PF17762 HTH domain found in ParB protein CFH90_09665 PF02195 ParB-like nuclease domain CFH90_09670 PF13614 AAA domain CFH90_09675 PF02527 rRNA small subunit methyltransferase G CFH90_09680 PF00483 Nucleotidyl transferase CFH90_09685 PF01636 Phosphotransferase enzyme family CFH90_09690 PF03968 OstA-like protein CFH90_09690 PF04453 LPS transport system D CFH90_09695 PF09312 SurA N-terminal domain CFH90_09695 PF00639 PPIC-type PPIASE domain CFH90_09700 PF17209 Hfq protein CFH90_09710 PF01119 DNA mismatch repair protein, C-terminal domain CFH90_09710 PF08676 MutL C terminal dimerisation domain CFH90_09715 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CFH90_09720 PF00849 RNA pseudouridylate synthase CFH90_09720 PF01479 S4 domain CFH90_09735 PF01479 S4 domain CFH90_09735 PF00849 RNA pseudouridylate synthase CFH90_09740 PF04284 Protein of unknown function (DUF441) CFH90_09745 PF07690 Major Facilitator Superfamily CFH90_09750 PF00027 Cyclic nucleotide-binding domain CFH90_09750 PF00520 Ion transport protein CFH90_09755 PF14493 Helix-turn-helix domain CFH90_09755 PF05970 PIF1-like helicase CFH90_09765 PF00465 Iron-containing alcohol dehydrogenase CFH90_09780 PF00171 Aldehyde dehydrogenase family CFH90_09790 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CFH90_09805 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CFH90_09810 PF01323 DSBA-like thioredoxin domain CFH90_09815 PF00106 short chain dehydrogenase CFH90_09825 PF00117 Glutamine amidotransferase class-I CFH90_09825 PF00958 GMP synthase C terminal domain CFH90_09825 PF02540 NAD synthase CFH90_09835 PF00665 Integrase core domain CFH90_09835 PF13276 HTH-like domain CFH90_09835 PF13333 Integrase core domain CFH90_09845 PF04264 YceI-like domain CFH90_09860 PF02780 Transketolase, C-terminal domain CFH90_09860 PF02779 Transketolase, pyrimidine binding domain CFH90_09860 PF00456 Transketolase, thiamine diphosphate binding domain CFH90_09865 PF02773 S-adenosylmethionine synthetase, C-terminal domain CFH90_09865 PF00438 S-adenosylmethionine synthetase, N-terminal domain CFH90_09865 PF02772 S-adenosylmethionine synthetase, central domain CFH90_09885 PF01810 LysE type translocator CFH90_09895 PF02075 Crossover junction endodeoxyribonuclease RuvC CFH90_09915 PF00202 Aminotransferase class-III CFH90_09920 PF02581 Thiamine monophosphate synthase CFH90_09925 PF13340 Putative transposase of IS4/5 family (DUF4096) CFH90_09960 PF00675 Insulinase (Peptidase family M16) CFH90_09960 PF05193 Peptidase M16 inactive domain CFH90_09965 PF02567 Phenazine biosynthesis-like protein CFH90_09975 PF01613 Flavin reductase like domain CFH90_09990 PF13737 Transposase DDE domain CFH90_09995 PF00180 Isocitrate/isopropylmalate dehydrogenase CFH90_10000 PF00849 RNA pseudouridylate synthase CFH90_10010 PF03971 Monomeric isocitrate dehydrogenase CFH90_10015 PF00576 HIUase/Transthyretin family CFH90_10025 PF07943 Penicillin-binding protein 5, C-terminal domain CFH90_10025 PF00768 D-alanyl-D-alanine carboxypeptidase CFH90_10030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_10035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFH90_10045 PF01256 Carbohydrate kinase CFH90_10045 PF03853 YjeF-related protein N-terminus CFH90_10050 PF08331 Domain of unknown function (DUF1730) CFH90_10055 PF04055 Radical SAM superfamily CFH90_10055 PF06968 Biotin and Thiamin Synthesis associated domain CFH90_10070 PF13193 AMP-binding enzyme C-terminal domain CFH90_10070 PF00501 AMP-binding enzyme CFH90_10075 PF00756 Putative esterase CFH90_10090 PF00285 Citrate synthase, C-terminal domain CFH90_10100 PF00440 Bacterial regulatory proteins, tetR family CFH90_10105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFH90_10105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFH90_10115 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CFH90_10120 PF02861 Clp amino terminal domain, pathogenicity island component CFH90_10120 PF00004 ATPase family associated with various cellular activities (AAA) CFH90_10120 PF07724 AAA domain (Cdc48 subfamily) CFH90_10120 PF17871 AAA lid domain CFH90_10120 PF10431 C-terminal, D2-small domain, of ClpB protein CFH90_10125 PF02617 ATP-dependent Clp protease adaptor protein ClpS CFH90_10135 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFH90_10135 PF02774 Semialdehyde dehydrogenase, dimerisation domain CFH90_10145 PF13340 Putative transposase of IS4/5 family (DUF4096) CFH90_10155 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CFH90_10160 PF00585 C-terminal regulatory domain of Threonine dehydratase CFH90_10160 PF00291 Pyridoxal-phosphate dependent enzyme CFH90_10170 PF02254 TrkA-N domain CFH90_10170 PF02080 TrkA-C domain CFH90_10175 PF02386 Cation transport protein CFH90_10180 PF02253 Phospholipase A1 CFH90_10185 PF05193 Peptidase M16 inactive domain CFH90_10185 PF08367 Peptidase M16C associated CFH90_10185 PF00675 Insulinase (Peptidase family M16) CFH90_10195 PF00294 pfkB family carbohydrate kinase CFH90_10205 PF07290 Protein of unknown function (DUF1449) CFH90_10215 PF01654 Cytochrome bd terminal oxidase subunit I CFH90_10220 PF02322 Cytochrome bd terminal oxidase subunit II CFH90_10225 PF08173 Membrane bound YbgT-like protein CFH90_10240 PF02028 BCCT, betaine/carnitine/choline family transporter CFH90_10245 PF00440 Bacterial regulatory proteins, tetR family CFH90_10245 PF13977 BetI-type transcriptional repressor, C-terminal CFH90_10250 PF00171 Aldehyde dehydrogenase family CFH90_10255 PF05199 GMC oxidoreductase CFH90_10255 PF00732 GMC oxidoreductase CFH90_10260 PF06039 Malate:quinone oxidoreductase (Mqo) CFH90_10275 PF01098 Cell cycle protein CFH90_10280 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CFH90_10285 PF04977 Septum formation initiator CFH90_10290 PF03952 Enolase, N-terminal domain CFH90_10290 PF00113 Enolase, C-terminal TIM barrel domain CFH90_10295 PF00793 DAHP synthetase I family CFH90_10300 PF00117 Glutamine amidotransferase class-I CFH90_10300 PF06418 CTP synthase N-terminus CFH90_10310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_10310 PF03466 LysR substrate binding domain CFH90_10315 PF00248 Aldo/keto reductase family CFH90_10320 PF07690 Major Facilitator Superfamily CFH90_10335 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_10335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFH90_10345 PF12697 Alpha/beta hydrolase family CFH90_10355 PF03737 Aldolase/RraA CFH90_10360 PF13460 NAD(P)H-binding CFH90_10365 PF01649 Ribosomal protein S20 CFH90_10390 PF13340 Putative transposase of IS4/5 family (DUF4096) CFH90_10400 PF00459 Inositol monophosphatase family CFH90_10415 PF13419 Haloacid dehalogenase-like hydrolase CFH90_10420 PF01479 S4 domain CFH90_10425 PF00154 recA bacterial DNA recombination protein CFH90_10430 PF02631 RecX family CFH90_10455 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CFH90_10455 PF00132 Bacterial transferase hexapeptide (six repeats) CFH90_10460 PF07977 FabA-like domain CFH90_10465 PF00132 Bacterial transferase hexapeptide (six repeats) CFH90_10465 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CFH90_10475 PF01103 Surface antigen CFH90_10475 PF07244 Surface antigen variable number repeat CFH90_10480 PF02163 Peptidase family M50 CFH90_10480 PF17820 PDZ domain CFH90_10480 PF13180 PDZ domain CFH90_10485 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CFH90_10485 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CFH90_10485 PF13288 DXP reductoisomerase C-terminal domain CFH90_10495 PF01255 Putative undecaprenyl diphosphate synthase CFH90_10500 PF01765 Ribosome recycling factor CFH90_10505 PF00696 Amino acid kinase family CFH90_10510 PF04055 Radical SAM superfamily CFH90_10510 PF18693 TRAM domain CFH90_10510 PF00919 Uncharacterized protein family UPF0004 CFH90_10515 PF00512 His Kinase A (phospho-acceptor) domain CFH90_10515 PF00989 PAS fold CFH90_10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_10520 PF02954 Bacterial regulatory protein, Fis family CFH90_10520 PF00158 Sigma-54 interaction domain CFH90_10520 PF00072 Response regulator receiver domain CFH90_10530 PF02824 TGS domain CFH90_10530 PF13291 ACT domain CFH90_10530 PF04607 Region found in RelA / SpoT proteins CFH90_10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_10535 PF03466 LysR substrate binding domain CFH90_10540 PF00557 Metallopeptidase family M24 CFH90_10545 PF05525 Branched-chain amino acid transport protein CFH90_10565 PF00324 Amino acid permease CFH90_10570 PF01037 Lrp/AsnC ligand binding domain CFH90_10575 PF03616 Sodium/glutamate symporter CFH90_10580 PF00593 TonB dependent receptor CFH90_10580 PF07715 TonB-dependent Receptor Plug Domain CFH90_10605 PF00330 Aconitase family (aconitate hydratase) CFH90_10605 PF11791 Aconitate B N-terminal domain CFH90_10605 PF06434 Aconitate hydratase 2 N-terminus CFH90_10635 PF17243 POTRA domain TamA domain 1 CFH90_10635 PF07244 Surface antigen variable number repeat CFH90_10635 PF01103 Surface antigen CFH90_10640 PF07690 Major Facilitator Superfamily CFH90_10645 PF03232 Ubiquinone biosynthesis protein COQ7 CFH90_10660 PF02152 Dihydroneopterin aldolase CFH90_10665 PF03109 ABC1 family CFH90_10670 PF00899 ThiF family CFH90_10675 PF13193 AMP-binding enzyme C-terminal domain CFH90_10675 PF00501 AMP-binding enzyme CFH90_10680 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_10680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_10680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_10685 PF00106 short chain dehydrogenase CFH90_10690 PF12833 Helix-turn-helix domain CFH90_10690 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CFH90_10710 PF09084 NMT1/THI5 like CFH90_10715 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_10720 PF17827 PrmC N-terminal domain CFH90_10720 PF13847 Methyltransferase domain CFH90_10725 PF03462 PCRF domain CFH90_10725 PF00472 RF-1 domain CFH90_10740 PF00296 Luciferase-like monooxygenase CFH90_10755 PF03618 Kinase/pyrophosphorylase CFH90_10760 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CFH90_10760 PF02896 PEP-utilising enzyme, TIM barrel domain CFH90_10760 PF00391 PEP-utilising enzyme, mobile domain CFH90_10770 PF06481 COX Aromatic Rich Motif CFH90_10770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CFH90_10775 PF00115 Cytochrome C and Quinol oxidase polypeptide I CFH90_10780 PF00510 Cytochrome c oxidase subunit III CFH90_10785 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CFH90_10790 PF01040 UbiA prenyltransferase family CFH90_10805 PF01250 Ribosomal protein S6 CFH90_10810 PF01084 Ribosomal protein S18 CFH90_10815 PF01281 Ribosomal protein L9, N-terminal domain CFH90_10815 PF03948 Ribosomal protein L9, C-terminal domain CFH90_10820 PF00772 DnaB-like helicase N terminal domain CFH90_10820 PF03796 DnaB-like helicase C terminal domain CFH90_10825 PF00842 Alanine racemase, C-terminal domain CFH90_10825 PF01168 Alanine racemase, N-terminal domain CFH90_10840 PF08379 Bacterial transglutaminase-like N-terminal region CFH90_10840 PF01841 Transglutaminase-like superfamily CFH90_10850 PF14403 Circularly permuted ATP-grasp type 2 CFH90_10865 PF01134 Glucose inhibited division protein A CFH90_10865 PF13932 GidA associated domain CFH90_10895 PF02954 Bacterial regulatory protein, Fis family CFH90_10900 PF01808 AICARFT/IMPCHase bienzyme CFH90_10900 PF02142 MGS-like domain CFH90_10905 PF02844 Phosphoribosylglycinamide synthetase, N domain CFH90_10905 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CFH90_10905 PF02843 Phosphoribosylglycinamide synthetase, C domain CFH90_10915 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CFH90_10915 PF12833 Helix-turn-helix domain CFH90_10920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFH90_10920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFH90_10935 PF03180 NLPA lipoprotein CFH90_10940 PF00005 ABC transporter CFH90_10940 PF09383 NIL domain CFH90_10945 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_10955 PF07733 Bacterial DNA polymerase III alpha NTPase domain CFH90_10955 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CFH90_10955 PF02811 PHP domain CFH90_10955 PF14579 Helix-hairpin-helix motif CFH90_10955 PF01336 OB-fold nucleic acid binding domain CFH90_10960 PF00588 SpoU rRNA Methylase family CFH90_10965 PF00132 Bacterial transferase hexapeptide (six repeats) CFH90_10980 PF05190 MutS family domain IV CFH90_10980 PF05192 MutS domain III CFH90_10980 PF01624 MutS domain I CFH90_10980 PF05188 MutS domain II CFH90_10980 PF00488 MutS domain V CFH90_10985 PF00037 4Fe-4S binding domain CFH90_10985 PF11953 Domain of unknown function (DUF3470) CFH90_10995 PF01596 O-methyltransferase CFH90_11005 PF12804 MobA-like NTP transferase domain CFH90_11005 PF14602 Hexapeptide repeat of succinyl-transferase CFH90_11005 PF00132 Bacterial transferase hexapeptide (six repeats) CFH90_11010 PF01205 Uncharacterized protein family UPF0029 CFH90_11015 PF12399 Branched-chain amino acid ATP-binding cassette transporter CFH90_11015 PF00005 ABC transporter CFH90_11020 PF03968 OstA-like protein CFH90_11035 PF01380 SIS domain CFH90_11035 PF00571 CBS domain CFH90_11040 PF02654 Cobalamin-5-phosphate synthase CFH90_11045 PF00300 Histidine phosphatase superfamily (branch 1) CFH90_11050 PF02277 Phosphoribosyltransferase CFH90_11055 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CFH90_11070 PF09190 DALR domain CFH90_11070 PF01406 tRNA synthetases class I (C) catalytic domain CFH90_11075 PF02391 MoaE protein CFH90_11085 PF04055 Radical SAM superfamily CFH90_11085 PF06463 Molybdenum Cofactor Synthesis C CFH90_11090 PF12804 MobA-like NTP transferase domain CFH90_11095 PF00384 Molybdopterin oxidoreductase CFH90_11095 PF01568 Molydopterin dinucleotide binding domain CFH90_11095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFH90_11095 PF04324 BFD-like [2Fe-2S] binding domain CFH90_11100 PF18267 Rubredoxin NAD+ reductase C-terminal domain CFH90_11100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFH90_11100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFH90_11100 PF04324 BFD-like [2Fe-2S] binding domain CFH90_11100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_11105 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_11105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFH90_11105 PF18267 Rubredoxin NAD+ reductase C-terminal domain CFH90_11105 PF04324 BFD-like [2Fe-2S] binding domain CFH90_11105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFH90_11110 PF07690 Major Facilitator Superfamily CFH90_11120 PF00005 ABC transporter CFH90_11135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CFH90_11135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CFH90_11140 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CFH90_11140 PF00271 Helicase conserved C-terminal domain CFH90_11140 PF04408 Helicase associated domain (HA2) CFH90_11140 PF11898 Domain of unknown function (DUF3418) CFH90_11140 PF00270 DEAD/DEAH box helicase CFH90_11145 PF00578 AhpC/TSA family CFH90_11145 PF10417 C-terminal domain of 1-Cys peroxiredoxin CFH90_11150 PF16123 Hydroxyacylglutathione hydrolase C-terminus CFH90_11150 PF00753 Metallo-beta-lactamase superfamily CFH90_11190 PF03793 PASTA domain CFH90_11190 PF00069 Protein kinase domain CFH90_11210 PF00814 Glycoprotease family CFH90_11215 PF01165 Ribosomal protein S21 CFH90_11220 PF09424 Yqey-like protein CFH90_11225 PF01435 Peptidase family M48 CFH90_11230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFH90_11230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFH90_11245 PF00156 Phosphoribosyl transferase domain CFH90_11255 PF01180 Dihydroorotate dehydrogenase CFH90_11275 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CFH90_11275 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CFH90_11280 PF00881 Nitroreductase family CFH90_11290 PF00271 Helicase conserved C-terminal domain CFH90_11290 PF00270 DEAD/DEAH box helicase CFH90_11295 PF00313 'Cold-shock' DNA-binding domain CFH90_11305 PF04545 Sigma-70, region 4 CFH90_11305 PF04542 Sigma-70 region 2 CFH90_11305 PF00140 Sigma-70 factor, region 1.2 CFH90_11310 PF04241 Protein of unknown function (DUF423) CFH90_11320 PF05690 Thiazole biosynthesis protein ThiG CFH90_11330 PF03992 Antibiotic biosynthesis monooxygenase CFH90_11335 PF02525 Flavodoxin-like fold CFH90_11340 PF02798 Glutathione S-transferase, N-terminal domain CFH90_11340 PF00043 Glutathione S-transferase, C-terminal domain CFH90_11345 PF00916 Sulfate permease family CFH90_11345 PF01740 STAS domain CFH90_11355 PF02390 Putative methyltransferase CFH90_11380 PF04055 Radical SAM superfamily CFH90_11380 PF06968 Biotin and Thiamin Synthesis associated domain CFH90_11385 PF13193 AMP-binding enzyme C-terminal domain CFH90_11385 PF00501 AMP-binding enzyme CFH90_11390 PF00440 Bacterial regulatory proteins, tetR family CFH90_11390 PF17925 Tetracyclin repressor-like, C-terminal domain CFH90_11395 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_11395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_11395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_11400 PF01039 Carboxyl transferase domain CFH90_11405 PF00378 Enoyl-CoA hydratase/isomerase CFH90_11410 PF00289 Biotin carboxylase, N-terminal domain CFH90_11410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFH90_11410 PF02785 Biotin carboxylase C-terminal domain CFH90_11410 PF00364 Biotin-requiring enzyme CFH90_11415 PF00682 HMGL-like CFH90_11420 PF01144 Coenzyme A transferase CFH90_11425 PF01144 Coenzyme A transferase CFH90_11430 PF02667 Short chain fatty acid transporter CFH90_11445 PF01979 Amidohydrolase family CFH90_11450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CFH90_11450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CFH90_11460 PF10672 S-adenosylmethionine-dependent methyltransferase CFH90_11460 PF01170 Putative RNA methylase family UPF0020 CFH90_11460 PF02926 THUMP domain CFH90_11470 PF10431 C-terminal, D2-small domain, of ClpB protein CFH90_11470 PF02861 Clp amino terminal domain, pathogenicity island component CFH90_11470 PF17871 AAA lid domain CFH90_11470 PF07724 AAA domain (Cdc48 subfamily) CFH90_11470 PF00004 ATPase family associated with various cellular activities (AAA) CFH90_11475 PF02566 OsmC-like protein CFH90_11480 PF13545 Crp-like helix-turn-helix domain CFH90_11480 PF00027 Cyclic nucleotide-binding domain CFH90_11485 PF00248 Aldo/keto reductase family CFH90_11500 PF00709 Adenylosuccinate synthetase CFH90_11505 PF13393 Histidyl-tRNA synthetase CFH90_11515 PF01037 Lrp/AsnC ligand binding domain CFH90_11515 PF13404 AsnC-type helix-turn-helix domain CFH90_11520 PF03591 AzlC protein CFH90_11535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CFH90_11535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CFH90_11540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFH90_11540 PF01411 tRNA synthetases class II (A) CFH90_11540 PF02272 DHHA1 domain CFH90_11545 PF00696 Amino acid kinase family CFH90_11545 PF13840 ACT domain CFH90_11545 PF01842 ACT domain CFH90_11550 PF02599 Global regulator protein family CFH90_11555 PF01351 Ribonuclease HII CFH90_11570 PF01292 Prokaryotic cytochrome b561 CFH90_11580 PF00962 Adenosine/AMP deaminase CFH90_11585 PF00860 Permease family CFH90_11595 PF00875 DNA photolyase CFH90_11595 PF03441 FAD binding domain of DNA photolyase CFH90_11605 PF03883 Peroxide stress protein YaaA CFH90_11625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CFH90_11630 PF00155 Aminotransferase class I and II CFH90_11635 PF01817 Chorismate mutase type II CFH90_11635 PF00800 Prephenate dehydratase CFH90_11635 PF01842 ACT domain CFH90_11640 PF01965 DJ-1/PfpI family CFH90_11645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_11645 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_11645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_11650 PF00375 Sodium:dicarboxylate symporter family CFH90_11655 PF00591 Glycosyl transferase family, a/b domain CFH90_11655 PF02885 Glycosyl transferase family, helical bundle domain CFH90_11665 PF07023 Protein of unknown function (DUF1315) CFH90_11670 PF01513 ATP-NAD kinase CFH90_11675 PF00905 Penicillin binding protein transpeptidase domain CFH90_11675 PF14814 Bifunctional transglycosylase second domain CFH90_11675 PF00912 Transglycosylase CFH90_11685 PF00293 NUDIX domain CFH90_11695 PF08521 Two-component sensor kinase N-terminal CFH90_11695 PF00512 His Kinase A (phospho-acceptor) domain CFH90_11695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_11700 PF00072 Response regulator receiver domain CFH90_11700 PF00486 Transcriptional regulatory protein, C terminal CFH90_11710 PF00437 Type II/IV secretion system protein CFH90_11710 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CFH90_11720 PF18389 TrmO C-terminal domain CFH90_11720 PF01980 tRNA-methyltransferase O CFH90_11725 PF00970 Oxidoreductase FAD-binding domain CFH90_11725 PF00175 Oxidoreductase NAD-binding domain CFH90_11750 PF13411 MerR HTH family regulatory protein CFH90_11760 PF00037 4Fe-4S binding domain CFH90_11765 PF13192 Thioredoxin domain CFH90_11765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_11775 PF05816 Toxic anion resistance protein (TelA) CFH90_11790 PF01272 Transcription elongation factor, GreA/GreB, C-term CFH90_11790 PF14760 Rnk N-terminus CFH90_11795 PF00464 Serine hydroxymethyltransferase CFH90_11835 PF13737 Transposase DDE domain CFH90_11845 PF00596 Class II Aldolase and Adducin N-terminal domain CFH90_11850 PF12833 Helix-turn-helix domain CFH90_11860 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CFH90_11860 PF12833 Helix-turn-helix domain CFH90_11865 PF03459 TOBE domain CFH90_11865 PF00005 ABC transporter CFH90_11870 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_11880 PF03459 TOBE domain CFH90_11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_11885 PF02634 FdhD/NarQ family CFH90_11900 PF00994 Probable molybdopterin binding domain CFH90_11900 PF01967 MoaC family CFH90_11905 PF00994 Probable molybdopterin binding domain CFH90_11905 PF03454 MoeA C-terminal region (domain IV) CFH90_11905 PF03453 MoeA N-terminal region (domain I and II) CFH90_11910 PF12804 MobA-like NTP transferase domain CFH90_11925 PF13784 Fic/DOC family N-terminal CFH90_11925 PF02661 Fic/DOC family CFH90_11930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_11930 PF03466 LysR substrate binding domain CFH90_11935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_11935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CFH90_11935 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_11940 PF03328 HpcH/HpaI aldolase/citrate lyase family CFH90_11955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_11955 PF03466 LysR substrate binding domain CFH90_11960 PF01144 Coenzyme A transferase CFH90_11965 PF01144 Coenzyme A transferase CFH90_11980 PF02426 Muconolactone delta-isomerase CFH90_11985 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CFH90_11985 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CFH90_11990 PF00108 Thiolase, N-terminal domain CFH90_11990 PF02803 Thiolase, C-terminal domain CFH90_12000 PF03573 outer membrane porin, OprD family CFH90_12020 PF18766 SWI2/SNF2 ATPase CFH90_12020 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CFH90_12020 PF12008 Type I restriction and modification enzyme - subunit R C terminal CFH90_12040 PF12161 HsdM N-terminal domain CFH90_12040 PF02384 N-6 DNA Methylase CFH90_12050 PF02661 Fic/DOC family CFH90_12085 PF00589 Phage integrase family CFH90_12085 PF13356 Arm DNA-binding domain CFH90_12095 PF00005 ABC transporter CFH90_12100 PF01061 ABC-2 type transporter CFH90_12105 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CFH90_12105 PF14489 QueF-like protein CFH90_12115 PF13406 Transglycosylase SLT domain CFH90_12120 PF05036 Sporulation related domain CFH90_12120 PF03330 Lytic transglycolase CFH90_12155 PF00889 Elongation factor TS CFH90_12160 PF00318 Ribosomal protein S2 CFH90_12165 PF00557 Metallopeptidase family M24 CFH90_12180 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CFH90_12185 PF00266 Aminotransferase class-V CFH90_12195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFH90_12215 PF03989 DNA gyrase C-terminal domain, beta-propeller CFH90_12215 PF00521 DNA gyrase/topoisomerase IV, subunit A CFH90_12225 PF00766 Electron transfer flavoprotein FAD-binding domain CFH90_12225 PF01012 Electron transfer flavoprotein domain CFH90_12230 PF01012 Electron transfer flavoprotein domain CFH90_12235 PF01810 LysE type translocator CFH90_12240 PF01037 Lrp/AsnC ligand binding domain CFH90_12245 PF13302 Acetyltransferase (GNAT) domain CFH90_12255 PF00589 Phage integrase family CFH90_12255 PF02899 Phage integrase, N-terminal SAM-like domain CFH90_12260 PF01678 Diaminopimelate epimerase CFH90_12265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CFH90_12265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CFH90_12275 PF00324 Amino acid permease CFH90_12285 PF01235 Sodium:alanine symporter family CFH90_12290 PF18073 Rubredoxin metal binding domain CFH90_12300 PF13180 PDZ domain CFH90_12300 PF17820 PDZ domain CFH90_12305 PF01784 NIF3 (NGG1p interacting factor 3) CFH90_12310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CFH90_12310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CFH90_12315 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CFH90_12315 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CFH90_12355 PF01040 UbiA prenyltransferase family CFH90_12360 PF04345 Chorismate lyase CFH90_12375 PF00117 Glutamine amidotransferase class-I CFH90_12380 PF02885 Glycosyl transferase family, helical bundle domain CFH90_12380 PF00591 Glycosyl transferase family, a/b domain CFH90_12385 PF00218 Indole-3-glycerol phosphate synthase CFH90_12390 PF00196 Bacterial regulatory proteins, luxR family CFH90_12405 PF00501 AMP-binding enzyme CFH90_12405 PF13193 AMP-binding enzyme C-terminal domain CFH90_12420 PF01227 GTP cyclohydrolase I CFH90_12430 PF00990 Diguanylate cyclase, GGDEF domain CFH90_12445 PF05675 Protein of unknown function (DUF817) CFH90_12450 PF01208 Uroporphyrinogen decarboxylase (URO-D) CFH90_12465 PF02678 Pirin CFH90_12465 PF17954 Quercetinase C-terminal cupin domain CFH90_12475 PF00550 Phosphopantetheine attachment site CFH90_12475 PF08659 KR domain CFH90_12475 PF00109 Beta-ketoacyl synthase, N-terminal domain CFH90_12475 PF16197 Ketoacyl-synthetase C-terminal extension CFH90_12475 PF08240 Alcohol dehydrogenase GroES-like domain CFH90_12475 PF00698 Acyl transferase domain CFH90_12475 PF02801 Beta-ketoacyl synthase, C-terminal domain CFH90_12475 PF14765 Polyketide synthase dehydratase CFH90_12475 PF00107 Zinc-binding dehydrogenase CFH90_12480 PF00440 Bacterial regulatory proteins, tetR family CFH90_12480 PF16925 Tetracyclin repressor-like, C-terminal domain CFH90_12515 PF01272 Transcription elongation factor, GreA/GreB, C-term CFH90_12515 PF03449 Transcription elongation factor, N-terminal CFH90_12520 PF00497 Bacterial extracellular solute-binding proteins, family 3 CFH90_12520 PF01464 Transglycosylase SLT domain CFH90_12530 PF01171 PP-loop family CFH90_12535 PF01464 Transglycosylase SLT domain CFH90_12540 PF01435 Peptidase family M48 CFH90_12555 PF03448 MgtE intracellular N domain CFH90_12555 PF00571 CBS domain CFH90_12555 PF01769 Divalent cation transporter CFH90_12560 PF00873 AcrB/AcrD/AcrF family CFH90_12565 PF03009 Glycerophosphoryl diester phosphodiesterase family CFH90_12570 PF01219 Prokaryotic diacylglycerol kinase CFH90_12575 PF00463 Isocitrate lyase family CFH90_12580 PF03466 LysR substrate binding domain CFH90_12580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_12585 PF00571 CBS domain CFH90_12585 PF01595 Cyclin M transmembrane N-terminal domain CFH90_12585 PF03471 Transporter associated domain CFH90_12590 PF03600 Citrate transporter CFH90_12610 PF09423 PhoD-like phosphatase CFH90_12610 PF16655 PhoD-like phosphatase, N-terminal domain CFH90_12630 PF00809 Pterin binding enzyme CFH90_12635 PF06480 FtsH Extracellular CFH90_12635 PF17862 AAA+ lid domain CFH90_12635 PF00004 ATPase family associated with various cellular activities (AAA) CFH90_12635 PF01434 Peptidase family M41 CFH90_12640 PF01728 FtsJ-like methyltransferase CFH90_12645 PF01985 CRS1 / YhbY (CRM) domain CFH90_12660 PF00117 Glutamine amidotransferase class-I CFH90_12660 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CFH90_12665 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CFH90_12665 PF02142 MGS-like domain CFH90_12665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFH90_12670 PF01272 Transcription elongation factor, GreA/GreB, C-term CFH90_12670 PF03449 Transcription elongation factor, N-terminal CFH90_12705 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CFH90_12710 PF00999 Sodium/hydrogen exchanger family CFH90_12720 PF04228 Putative neutral zinc metallopeptidase CFH90_12725 PF05661 Protein of unknown function (DUF808) CFH90_12730 PF00579 tRNA synthetases class I (W and Y) CFH90_12735 PF07290 Protein of unknown function (DUF1449) CFH90_12740 PF15975 Flotillin CFH90_12740 PF01145 SPFH domain / Band 7 family CFH90_12750 PF00549 CoA-ligase CFH90_12750 PF02629 CoA binding domain CFH90_12755 PF08442 ATP-grasp domain CFH90_12755 PF00549 CoA-ligase CFH90_12760 PF07992 Pyridine nucleotide-disulphide oxidoreductase CFH90_12760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFH90_12765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CFH90_12765 PF02817 e3 binding domain CFH90_12765 PF00364 Biotin-requiring enzyme CFH90_12770 PF16078 2-oxoglutarate dehydrogenase N-terminus CFH90_12770 PF16870 2-oxoglutarate dehydrogenase C-terminal CFH90_12770 PF02779 Transketolase, pyrimidine binding domain CFH90_12770 PF00676 Dehydrogenase E1 component CFH90_12775 PF13085 2Fe-2S iron-sulfur cluster binding domain CFH90_12780 PF02910 Fumarate reductase flavoprotein C-term CFH90_12780 PF00890 FAD binding domain CFH90_12785 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CFH90_12790 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CFH90_12795 PF00285 Citrate synthase, C-terminal domain CFH90_12820 PF00795 Carbon-nitrogen hydrolase CFH90_12820 PF02540 NAD synthase CFH90_12845 PF00037 4Fe-4S binding domain CFH90_12850 PF01467 Cytidylyltransferase-like CFH90_12855 PF01668 SmpB protein CFH90_12860 PF03358 NADPH-dependent FMN reductase CFH90_12870 PF00849 RNA pseudouridylate synthase CFH90_12870 PF01479 S4 domain CFH90_12875 PF13525 Outer membrane lipoprotein CFH90_12880 PF08278 DNA primase DnaG DnaB-binding CFH90_12880 PF08275 DNA primase catalytic core, N-terminal domain CFH90_12880 PF10410 DnaB-helicase binding domain of primase CFH90_12880 PF01807 CHC2 zinc finger CFH90_12885 PF01488 Shikimate / quinate 5-dehydrogenase CFH90_12885 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CFH90_12885 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CFH90_12895 PF03550 Outer membrane lipoprotein LolB CFH90_12900 PF00288 GHMP kinases N terminal domain CFH90_12900 PF08544 GHMP kinases C terminal CFH90_12925 PF14572 Phosphoribosyl synthetase-associated domain CFH90_12925 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CFH90_12930 PF01386 Ribosomal L25p family CFH90_12935 PF01195 Peptidyl-tRNA hydrolase CFH90_12940 PF02261 Aspartate decarboxylase CFH90_12955 PF13737 Transposase DDE domain CFH90_12965 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CFH90_12970 PF01810 LysE type translocator CFH90_12990 PF09335 SNARE associated Golgi protein CFH90_13000 PF03466 LysR substrate binding domain CFH90_13000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_13020 PF04546 Sigma-70, non-essential region CFH90_13020 PF04545 Sigma-70, region 4 CFH90_13020 PF04539 Sigma-70 region 3 CFH90_13020 PF03979 Sigma-70 factor, region 1.1 CFH90_13020 PF00140 Sigma-70 factor, region 1.2 CFH90_13020 PF04542 Sigma-70 region 2 CFH90_13025 PF04359 Protein of unknown function (DUF493) CFH90_13030 PF03099 Biotin/lipoate A/B protein ligase family CFH90_13040 PF00465 Iron-containing alcohol dehydrogenase CFH90_13045 PF13520 Amino acid permease CFH90_13050 PF03358 NADPH-dependent FMN reductase CFH90_13065 PF00588 SpoU rRNA Methylase family CFH90_13070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CFH90_13070 PF10414 Sirohaem synthase dimerisation region CFH90_13070 PF14824 Sirohaem biosynthesis protein central CFH90_13075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFH90_13075 PF02403 Seryl-tRNA synthetase N-terminal domain CFH90_13085 PF03548 Outer membrane lipoprotein carrier protein LolA CFH90_13095 PF01016 Ribosomal L27 protein CFH90_13100 PF00829 Ribosomal prokaryotic L21 protein CFH90_13105 PF00348 Polyprenyl synthetase CFH90_13115 PF01569 PAP2 superfamily CFH90_13120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CFH90_13120 PF00529 HlyD membrane-fusion protein of T1SS CFH90_13125 PF00873 AcrB/AcrD/AcrF family CFH90_13130 PF02321 Outer membrane efflux protein CFH90_13135 PF01906 Putative heavy-metal-binding CFH90_13140 PF01906 Putative heavy-metal-binding CFH90_13160 PF00133 tRNA synthetases class I (I, L, M and V) CFH90_13160 PF10458 Valyl tRNA synthetase tRNA binding arm CFH90_13160 PF08264 Anticodon-binding domain of tRNA CFH90_13185 PF00970 Oxidoreductase FAD-binding domain CFH90_13185 PF00175 Oxidoreductase NAD-binding domain CFH90_13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_13190 PF03466 LysR substrate binding domain CFH90_13200 PF00313 'Cold-shock' DNA-binding domain CFH90_13210 PF00361 Proton-conducting membrane transporter CFH90_13215 PF00361 Proton-conducting membrane transporter CFH90_13220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CFH90_13220 PF00361 Proton-conducting membrane transporter CFH90_13225 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CFH90_13230 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CFH90_13235 PF12838 4Fe-4S dicluster domain CFH90_13240 PF00146 NADH dehydrogenase CFH90_13245 PF00384 Molybdopterin oxidoreductase CFH90_13245 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CFH90_13245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CFH90_13250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CFH90_13250 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CFH90_13250 PF10531 SLBB domain CFH90_13260 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CFH90_13260 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CFH90_13265 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CFH90_13270 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CFH90_13280 PF00672 HAMP domain CFH90_13280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_13280 PF00512 His Kinase A (phospho-acceptor) domain CFH90_13285 PF00072 Response regulator receiver domain CFH90_13285 PF00486 Transcriptional regulatory protein, C terminal CFH90_13290 PF02867 Ribonucleotide reductase, barrel domain CFH90_13290 PF03477 ATP cone domain CFH90_13290 PF00317 Ribonucleotide reductase, all-alpha domain CFH90_13295 PF00268 Ribonucleotide reductase, small chain CFH90_13330 PF05593 RHS Repeat CFH90_13330 PF03527 RHS protein CFH90_13345 PF01425 Amidase CFH90_13350 PF02785 Biotin carboxylase C-terminal domain CFH90_13350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CFH90_13350 PF00289 Biotin carboxylase, N-terminal domain CFH90_13355 PF00392 Bacterial regulatory proteins, gntR family CFH90_13355 PF07729 FCD domain CFH90_13360 PF04972 BON domain CFH90_13360 PF01476 LysM domain CFH90_13365 PF00550 Phosphopantetheine attachment site CFH90_13375 PF00698 Acyl transferase domain CFH90_13380 PF01783 Ribosomal L32p protein family CFH90_13385 PF02620 Large ribosomal RNA subunit accumulation protein YceD CFH90_13390 PF04315 Elongation factor P hydroxylase CFH90_13395 PF01300 Telomere recombination CFH90_13405 PF00884 Sulfatase CFH90_13410 PF02616 Segregation and condensation protein ScpA CFH90_13415 PF04079 Segregation and condensation complex subunit ScpB CFH90_13420 PF01479 S4 domain CFH90_13420 PF00849 RNA pseudouridylate synthase CFH90_13430 PF00005 ABC transporter CFH90_13430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CFH90_13435 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_13435 PF12911 N-terminal TM domain of oligopeptide transport permease C CFH90_13440 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_13470 PF00155 Aminotransferase class I and II CFH90_13475 PF04055 Radical SAM superfamily CFH90_13475 PF00202 Aminotransferase class-III CFH90_13475 PF06968 Biotin and Thiamin Synthesis associated domain CFH90_13480 PF12697 Alpha/beta hydrolase family CFH90_13480 PF08241 Methyltransferase domain CFH90_13490 PF00578 AhpC/TSA family CFH90_13495 PF00210 Ferritin-like domain CFH90_13510 PF07715 TonB-dependent Receptor Plug Domain CFH90_13510 PF00593 TonB dependent receptor CFH90_13515 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CFH90_13520 PF00533 BRCA1 C Terminus (BRCT) domain CFH90_13520 PF03120 NAD-dependent DNA ligase OB-fold domain CFH90_13520 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CFH90_13520 PF12826 Helix-hairpin-helix motif CFH90_13520 PF01653 NAD-dependent DNA ligase adenylation domain CFH90_13525 PF04354 ZipA, C-terminal FtsZ-binding domain CFH90_13530 PF06470 SMC proteins Flexible Hinge Domain CFH90_13530 PF02463 RecF/RecN/SMC N terminal domain CFH90_13540 PF01925 Sulfite exporter TauE/SafE CFH90_13550 PF03309 Type III pantothenate kinase CFH90_13560 PF00448 SRP54-type protein, GTPase domain CFH90_13560 PF02881 SRP54-type protein, helical bundle domain CFH90_13560 PF02978 Signal peptide binding domain CFH90_13570 PF00144 Beta-lactamase CFH90_13595 PF01207 Dihydrouridine synthase (Dus) CFH90_13615 PF07411 Domain of unknown function (DUF1508) CFH90_13625 PF08274 PhnA Zinc-Ribbon CFH90_13625 PF03831 PhnA domain CFH90_13630 PF04343 Protein of unknown function, DUF488 CFH90_13650 PF00849 RNA pseudouridylate synthase CFH90_13655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CFH90_13690 PF01850 PIN domain CFH90_13695 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CFH90_13715 PF00694 Aconitase C-terminal domain CFH90_13715 PF00330 Aconitase family (aconitate hydratase) CFH90_13745 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CFH90_13755 PF06827 Zinc finger found in FPG and IleRS CFH90_13755 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CFH90_13755 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CFH90_13760 PF00639 PPIC-type PPIASE domain CFH90_13760 PF09312 SurA N-terminal domain CFH90_13770 PF01741 Large-conductance mechanosensitive channel, MscL CFH90_13780 PF00860 Permease family CFH90_13785 PF05175 Methyltransferase small domain CFH90_13785 PF08468 Methyltransferase small domain N-terminal CFH90_13790 PF00324 Amino acid permease CFH90_13795 PF13505 Outer membrane protein beta-barrel domain CFH90_13795 PF00691 OmpA family CFH90_13805 PF02803 Thiolase, C-terminal domain CFH90_13805 PF00108 Thiolase, N-terminal domain CFH90_13815 PF00893 Small Multidrug Resistance protein CFH90_13825 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CFH90_13825 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CFH90_13830 PF01011 PQQ enzyme repeat CFH90_13835 PF04966 Carbohydrate-selective porin, OprB family CFH90_13840 PF02515 CoA-transferase family III CFH90_13845 PF12833 Helix-turn-helix domain CFH90_13845 PF02311 AraC-like ligand binding domain CFH90_13850 PF02803 Thiolase, C-terminal domain CFH90_13850 PF00108 Thiolase, N-terminal domain CFH90_13855 PF00378 Enoyl-CoA hydratase/isomerase CFH90_13855 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFH90_13855 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFH90_13865 PF13673 Acetyltransferase (GNAT) domain CFH90_13875 PF03006 Haemolysin-III related CFH90_13880 PF07690 Major Facilitator Superfamily CFH90_13880 PF00083 Sugar (and other) transporter CFH90_13890 PF00149 Calcineurin-like phosphoesterase CFH90_13890 PF10518 TAT (twin-arginine translocation) pathway signal sequence CFH90_13895 PF13091 PLD-like domain CFH90_13905 PF01926 50S ribosome-binding GTPase CFH90_13905 PF13167 GTP-binding GTPase N-terminal CFH90_13905 PF16360 GTP-binding GTPase Middle Region CFH90_13930 PF00149 Calcineurin-like phosphoesterase CFH90_13935 PF00398 Ribosomal RNA adenine dimethylase CFH90_13955 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CFH90_13960 PF00572 Ribosomal protein L13 CFH90_13965 PF00380 Ribosomal protein S9/S16 CFH90_13975 PF00043 Glutathione S-transferase, C-terminal domain CFH90_13975 PF02798 Glutathione S-transferase, N-terminal domain CFH90_13980 PF04386 Stringent starvation protein B CFH90_13995 PF13340 Putative transposase of IS4/5 family (DUF4096) CFH90_14045 PF04333 MlaA lipoprotein CFH90_14050 PF13426 PAS domain CFH90_14050 PF07228 Stage II sporulation protein E (SpoIIE) CFH90_14060 PF00795 Carbon-nitrogen hydrolase CFH90_14065 PF02566 OsmC-like protein CFH90_14075 PF00437 Type II/IV secretion system protein CFH90_14095 PF01612 3'-5' exonuclease CFH90_14095 PF00476 DNA polymerase family A CFH90_14095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CFH90_14095 PF01367 5'-3' exonuclease, C-terminal SAM fold CFH90_14100 PF02325 YGGT family CFH90_14105 PF14748 Pyrroline-5-carboxylate reductase dimerisation CFH90_14105 PF03807 NADP oxidoreductase coenzyme F420-dependent CFH90_14110 PF09179 TilS substrate binding domain CFH90_14110 PF11734 TilS substrate C-terminal domain CFH90_14110 PF01171 PP-loop family CFH90_14115 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CFH90_14120 PF02541 Ppx/GppA phosphatase family CFH90_14125 PF00085 Thioredoxin CFH90_14130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFH90_14130 PF07498 Rho termination factor, N-terminal domain CFH90_14130 PF07497 Rho termination factor, RNA-binding domain CFH90_14140 PF00216 Bacterial DNA-binding protein CFH90_14145 PF03484 tRNA synthetase B5 domain CFH90_14145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CFH90_14145 PF01588 Putative tRNA binding domain CFH90_14145 PF03147 Ferredoxin-fold anticodon binding domain CFH90_14145 PF03483 B3/4 domain CFH90_14150 PF01409 tRNA synthetases class II core domain (F) CFH90_14150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CFH90_14170 PF00453 Ribosomal protein L20 CFH90_14175 PF01632 Ribosomal protein L35 CFH90_14190 PF09335 SNARE associated Golgi protein CFH90_14200 PF02798 Glutathione S-transferase, N-terminal domain CFH90_14200 PF00043 Glutathione S-transferase, C-terminal domain CFH90_14210 PF00707 Translation initiation factor IF-3, C-terminal domain CFH90_14210 PF05198 Translation initiation factor IF-3, N-terminal domain CFH90_14215 PF03129 Anticodon binding domain CFH90_14215 PF02824 TGS domain CFH90_14215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CFH90_14215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CFH90_14220 PF00501 AMP-binding enzyme CFH90_14220 PF13193 AMP-binding enzyme C-terminal domain CFH90_14225 PF04751 Protein of unknown function (DUF615) CFH90_14230 PF00381 PTS HPr component phosphorylation site CFH90_14235 PF03668 P-loop ATPase protein family CFH90_14240 PF02569 Pantoate-beta-alanine ligase CFH90_14245 PF02548 Ketopantoate hydroxymethyltransferase CFH90_14250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CFH90_14255 PF12627 Probable RNA and SrmB- binding site of polymerase A CFH90_14255 PF12626 Polymerase A arginine-rich C-terminus CFH90_14255 PF01743 Poly A polymerase head domain CFH90_14265 PF03819 MazG nucleotide pyrophosphohydrolase domain CFH90_14275 PF02824 TGS domain CFH90_14275 PF13291 ACT domain CFH90_14275 PF04607 Region found in RelA / SpoT proteins CFH90_14280 PF05958 tRNA (Uracil-5-)-methyltransferase CFH90_14290 PF00291 Pyridoxal-phosphate dependent enzyme CFH90_14295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_14295 PF00512 His Kinase A (phospho-acceptor) domain CFH90_14295 PF01627 Hpt domain CFH90_14295 PF00072 Response regulator receiver domain CFH90_14295 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CFH90_14295 PF00672 HAMP domain CFH90_14300 PF00378 Enoyl-CoA hydratase/isomerase CFH90_14305 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CFH90_14305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CFH90_14310 PF01261 Xylose isomerase-like TIM barrel CFH90_14325 PF00909 Ammonium Transporter Family CFH90_14325 PF00672 HAMP domain CFH90_14335 PF02233 NAD(P) transhydrogenase beta subunit CFH90_14340 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CFH90_14345 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CFH90_14345 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CFH90_14350 PF07690 Major Facilitator Superfamily CFH90_14365 PF00355 Rieske [2Fe-2S] domain CFH90_14365 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CFH90_14370 PF00866 Ring hydroxylating beta subunit CFH90_14375 PF00175 Oxidoreductase NAD-binding domain CFH90_14375 PF00970 Oxidoreductase FAD-binding domain CFH90_14375 PF00111 2Fe-2S iron-sulfur cluster binding domain CFH90_14380 PF07690 Major Facilitator Superfamily CFH90_14385 PF13006 Insertion element 4 transposase N-terminal CFH90_14385 PF01609 Transposase DDE domain CFH90_14390 PF12833 Helix-turn-helix domain CFH90_14390 PF14525 AraC-binding-like domain CFH90_14405 PF12833 Helix-turn-helix domain CFH90_14405 PF14525 AraC-binding-like domain CFH90_14420 PF01613 Flavin reductase like domain CFH90_14425 PF17885 Styrene monooxygenase A putative substrate binding domain CFH90_14445 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CFH90_14445 PF01348 Type II intron maturase CFH90_14465 PF11867 Domain of unknown function (DUF3387) CFH90_14465 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CFH90_14465 PF18766 SWI2/SNF2 ATPase CFH90_14480 PF01420 Type I restriction modification DNA specificity domain CFH90_14485 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CFH90_14485 PF17191 RecG wedge domain CFH90_14485 PF00270 DEAD/DEAH box helicase CFH90_14490 PF02384 N-6 DNA Methylase CFH90_14575 PF00589 Phage integrase family CFH90_14760 PF01381 Helix-turn-helix CFH90_14810 PF00589 Phage integrase family CFH90_14815 PF01207 Dihydrouridine synthase (Dus) CFH90_14830 PF00899 ThiF family CFH90_14835 PF00694 Aconitase C-terminal domain CFH90_14835 PF00330 Aconitase family (aconitate hydratase) CFH90_14840 PF01026 TatD related DNase CFH90_14855 PF16658 Class II release factor RF3, C-terminal domain CFH90_14855 PF03144 Elongation factor Tu domain 2 CFH90_14855 PF00009 Elongation factor Tu GTP binding domain CFH90_14865 PF03707 Bacterial signalling protein N terminal repeat CFH90_14865 PF00990 Diguanylate cyclase, GGDEF domain CFH90_14865 PF00563 EAL domain CFH90_14870 PF03572 Peptidase family S41 CFH90_14870 PF17804 Tail specific protease N-terminal domain CFH90_14870 PF00595 PDZ domain CFH90_14870 PF11818 C-terminal domain of tail specific protease (DUF3340) CFH90_14875 PF00933 Glycosyl hydrolase family 3 N terminal domain CFH90_14890 PF00171 Aldehyde dehydrogenase family CFH90_14895 PF00871 Acetokinase family CFH90_14900 PF01515 Phosphate acetyl/butaryl transferase CFH90_14900 PF07085 DRTGG domain CFH90_14910 PF05163 DinB family CFH90_14920 PF02311 AraC-like ligand binding domain CFH90_14920 PF12833 Helix-turn-helix domain CFH90_14930 PF05681 Fumarate hydratase (Fumerase) CFH90_14930 PF05683 Fumarase C-terminus CFH90_14945 PF06689 ClpX C4-type zinc finger CFH90_14945 PF10431 C-terminal, D2-small domain, of ClpB protein CFH90_14945 PF07724 AAA domain (Cdc48 subfamily) CFH90_14950 PF00574 Clp protease CFH90_14955 PF05697 Bacterial trigger factor protein (TF) CFH90_14955 PF05698 Bacterial trigger factor protein (TF) C-terminus CFH90_14955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFH90_14960 PF00593 TonB dependent receptor CFH90_14960 PF07715 TonB-dependent Receptor Plug Domain CFH90_14965 PF00593 TonB dependent receptor CFH90_14965 PF07715 TonB-dependent Receptor Plug Domain CFH90_14970 PF13640 2OG-Fe(II) oxygenase superfamily CFH90_14970 PF18331 PKHD-type hydroxylase C-terminal domain CFH90_14975 PF01070 FMN-dependent dehydrogenase CFH90_14980 PF08502 LeuA allosteric (dimerisation) domain CFH90_14980 PF00682 HMGL-like CFH90_14985 PF00561 alpha/beta hydrolase fold CFH90_14990 PF00561 alpha/beta hydrolase fold CFH90_14990 PF07021 Methionine biosynthesis protein MetW CFH90_15000 PF01725 Ham1 family CFH90_15010 PF02416 mttA/Hcf106 family CFH90_15015 PF02416 mttA/Hcf106 family CFH90_15020 PF00902 Sec-independent protein translocase protein (TatC) CFH90_15035 PF01790 Prolipoprotein diacylglyceryl transferase CFH90_15055 PF00303 Thymidylate synthase CFH90_15060 PF00186 Dihydrofolate reductase CFH90_15075 PF01625 Peptide methionine sulfoxide reductase CFH90_15085 PF01618 MotA/TolQ/ExbB proton channel family CFH90_15095 PF00551 Formyl transferase CFH90_15095 PF01842 ACT domain CFH90_15105 PF00171 Aldehyde dehydrogenase family CFH90_15110 PF00830 Ribosomal L28 family CFH90_15115 PF00471 Ribosomal protein L33 CFH90_15120 PF00999 Sodium/hydrogen exchanger family CFH90_15120 PF02254 TrkA-N domain CFH90_15140 PF00580 UvrD/REP helicase N-terminal domain CFH90_15140 PF13361 UvrD-like helicase C-terminal domain CFH90_15145 PF02595 Glycerate kinase family CFH90_15170 PF08272 Topoisomerase I zinc-ribbon-like CFH90_15170 PF01131 DNA topoisomerase CFH90_15170 PF01396 Topoisomerase DNA binding C4 zinc finger CFH90_15170 PF01751 Toprim domain CFH90_15185 PF04102 SlyX CFH90_15200 PF03279 Bacterial lipid A biosynthesis acyltransferase CFH90_15210 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFH90_15210 PF02774 Semialdehyde dehydrogenase, dimerisation domain CFH90_15230 PF01416 tRNA pseudouridine synthase CFH90_15240 PF01176 Translation initiation factor 1A / IF-1 CFH90_15255 PF00180 Isocitrate/isopropylmalate dehydrogenase CFH90_15265 PF00694 Aconitase C-terminal domain CFH90_15270 PF00330 Aconitase family (aconitate hydratase) CFH90_15280 PF03466 LysR substrate binding domain CFH90_15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_15300 PF00293 NUDIX domain CFH90_15305 PF02896 PEP-utilising enzyme, TIM barrel domain CFH90_15305 PF00391 PEP-utilising enzyme, mobile domain CFH90_15305 PF01590 GAF domain CFH90_15305 PF05524 PEP-utilising enzyme, N-terminal CFH90_15315 PF01810 LysE type translocator CFH90_15320 PF13404 AsnC-type helix-turn-helix domain CFH90_15320 PF01037 Lrp/AsnC ligand binding domain CFH90_15330 PF02770 Acyl-CoA dehydrogenase, middle domain CFH90_15330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CFH90_15330 PF18158 Adaptive response protein AidB N-terminal domain CFH90_15365 PF00141 Peroxidase CFH90_15370 PF12706 Beta-lactamase superfamily domain CFH90_15380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_15380 PF03466 LysR substrate binding domain CFH90_15395 PF01479 S4 domain CFH90_15395 PF00849 RNA pseudouridylate synthase CFH90_15405 PF12111 Polyribonucleotide phosphorylase C terminal CFH90_15405 PF10150 Ribonuclease E/G family CFH90_15405 PF00575 S1 RNA binding domain CFH90_15410 PF00501 AMP-binding enzyme CFH90_15410 PF13193 AMP-binding enzyme C-terminal domain CFH90_15435 PF04024 PspC domain CFH90_15455 PF02091 Glycyl-tRNA synthetase alpha subunit CFH90_15460 PF05746 DALR anticodon binding domain CFH90_15460 PF02092 Glycyl-tRNA synthetase beta subunit CFH90_15495 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFH90_15495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CFH90_15510 PF01209 ubiE/COQ5 methyltransferase family CFH90_15535 PF03884 DNA gyrase inhibitor YacG CFH90_15545 PF00753 Metallo-beta-lactamase superfamily CFH90_15550 PF00762 Ferrochelatase CFH90_15560 PF01177 Asp/Glu/Hydantoin racemase CFH90_15580 PF01206 Sulfurtransferase TusA CFH90_15585 PF03471 Transporter associated domain CFH90_15585 PF00571 CBS domain CFH90_15590 PF00795 Carbon-nitrogen hydrolase CFH90_15595 PF01588 Putative tRNA binding domain CFH90_15605 PF07963 Prokaryotic N-terminal methylation motif CFH90_15605 PF08334 Type II secretion system (T2SS), protein G CFH90_15610 PF00482 Type II secretion system (T2SS), protein F CFH90_15615 PF00270 DEAD/DEAH box helicase CFH90_15615 PF00271 Helicase conserved C-terminal domain CFH90_15615 PF17764 3′ DNA-binding domain (3′BD) CFH90_15615 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CFH90_15615 PF18074 Primosomal protein N C-terminal domain CFH90_15620 PF00999 Sodium/hydrogen exchanger family CFH90_15620 PF02254 TrkA-N domain CFH90_15625 PF01430 Hsp33 protein CFH90_15635 PF01556 DnaJ C terminal domain CFH90_15635 PF00226 DnaJ domain CFH90_15645 PF04325 Protein of unknown function (DUF465) CFH90_15650 PF01544 CorA-like Mg2+ transporter protein CFH90_15655 PF00013 KH domain CFH90_15655 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CFH90_15655 PF01138 3' exoribonuclease family, domain 1 CFH90_15655 PF03725 3' exoribonuclease family, domain 2 CFH90_15655 PF00575 S1 RNA binding domain CFH90_15660 PF00312 Ribosomal protein S15 CFH90_15670 PF13538 UvrD-like helicase C-terminal domain CFH90_15675 PF12705 PD-(D/E)XK nuclease superfamily CFH90_15675 PF00580 UvrD/REP helicase N-terminal domain CFH90_15675 PF13361 UvrD-like helicase C-terminal domain CFH90_15680 PF17946 RecC C-terminal domain CFH90_15690 PF03976 Polyphosphate kinase 2 (PPK2) CFH90_15700 PF01209 ubiE/COQ5 methyltransferase family CFH90_15710 PF03109 ABC1 family CFH90_15720 PF01494 FAD binding domain CFH90_15725 PF01502 Phosphoribosyl-AMP cyclohydrolase CFH90_15735 PF02463 RecF/RecN/SMC N terminal domain CFH90_15740 PF13244 Domain of unknown function (DUF4040) CFH90_15740 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CFH90_15740 PF00361 Proton-conducting membrane transporter CFH90_15740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CFH90_15745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CFH90_15750 PF00361 Proton-conducting membrane transporter CFH90_15760 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CFH90_15770 PF02033 Ribosome-binding factor A CFH90_15775 PF08364 Bacterial translation initiation factor IF-2 associated region CFH90_15775 PF04760 Translation initiation factor IF-2, N-terminal region CFH90_15775 PF00009 Elongation factor Tu GTP binding domain CFH90_15775 PF11987 Translation-initiation factor 2 CFH90_15780 PF08529 NusA N-terminal domain CFH90_15780 PF13184 NusA-like KH domain CFH90_15780 PF00575 S1 RNA binding domain CFH90_15785 PF17384 RimP C-terminal SH3 domain CFH90_15785 PF02576 RimP N-terminal domain CFH90_15815 PF03840 Preprotein translocase SecG subunit CFH90_15820 PF00121 Triosephosphate isomerase CFH90_15825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CFH90_15825 PF00437 Type II/IV secretion system protein CFH90_15830 PF00482 Type II secretion system (T2SS), protein F CFH90_15835 PF01478 Type IV leader peptidase family CFH90_15835 PF06750 Bacterial Peptidase A24 N-terminal domain CFH90_15840 PF01121 Dephospho-CoA kinase CFH90_15850 PF08032 RNA 2'-O ribose methyltransferase substrate binding CFH90_15850 PF00588 SpoU rRNA Methylase family CFH90_15855 PF06865 Pyrimidine/purine nucleoside phosphorylase CFH90_15860 PF02463 RecF/RecN/SMC N terminal domain CFH90_15865 PF02622 Uncharacterized ACR, COG1678 CFH90_15870 PF03652 Holliday junction resolvase CFH90_15875 PF13533 Biotin-lipoyl like CFH90_15885 PF04632 Fusaric acid resistance protein family CFH90_15900 PF00005 ABC transporter CFH90_15900 PF00664 ABC transporter transmembrane region CFH90_15905 PF01066 CDP-alcohol phosphatidyltransferase CFH90_15915 PF08459 UvrC Helix-hairpin-helix N-terminal CFH90_15915 PF02151 UvrB/uvrC motif CFH90_15915 PF01541 GIY-YIG catalytic domain CFH90_15935 PF00378 Enoyl-CoA hydratase/isomerase CFH90_15935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CFH90_15935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CFH90_15940 PF00108 Thiolase, N-terminal domain CFH90_15940 PF02803 Thiolase, C-terminal domain CFH90_15950 PF03848 Tellurite resistance protein TehB CFH90_15950 PF09313 Domain of unknown function (DUF1971) CFH90_15975 PF01323 DSBA-like thioredoxin domain CFH90_16000 PF00183 Hsp90 protein CFH90_16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_16010 PF03922 OmpW family CFH90_16015 PF13726 Na+-H+ antiporter family CFH90_16015 PF03553 Na+/H+ antiporter family CFH90_16040 PF01609 Transposase DDE domain CFH90_16040 PF13006 Insertion element 4 transposase N-terminal CFH90_16045 PF04998 RNA polymerase Rpb1, domain 5 CFH90_16045 PF00623 RNA polymerase Rpb1, domain 2 CFH90_16045 PF05000 RNA polymerase Rpb1, domain 4 CFH90_16045 PF04983 RNA polymerase Rpb1, domain 3 CFH90_16045 PF04997 RNA polymerase Rpb1, domain 1 CFH90_16050 PF00562 RNA polymerase Rpb2, domain 6 CFH90_16050 PF10385 RNA polymerase beta subunit external 1 domain CFH90_16050 PF04565 RNA polymerase Rpb2, domain 3 CFH90_16050 PF04561 RNA polymerase Rpb2, domain 2 CFH90_16050 PF04563 RNA polymerase beta subunit CFH90_16050 PF04560 RNA polymerase Rpb2, domain 7 CFH90_16055 PF16320 Ribosomal protein L7/L12 dimerisation domain CFH90_16055 PF00542 Ribosomal protein L7/L12 C-terminal domain CFH90_16060 PF00466 Ribosomal protein L10 CFH90_16065 PF00687 Ribosomal protein L1p/L10e family CFH90_16070 PF03946 Ribosomal protein L11, N-terminal domain CFH90_16070 PF00298 Ribosomal protein L11, RNA binding domain CFH90_16075 PF02357 Transcription termination factor nusG CFH90_16075 PF00467 KOW motif CFH90_16080 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CFH90_16090 PF00009 Elongation factor Tu GTP binding domain CFH90_16090 PF03144 Elongation factor Tu domain 2 CFH90_16090 PF03143 Elongation factor Tu C-terminal domain CFH90_16115 PF04715 Anthranilate synthase component I, N terminal region CFH90_16115 PF00425 chorismate binding enzyme CFH90_16120 PF13419 Haloacid dehalogenase-like hydrolase CFH90_16125 PF16697 Inner membrane component of T3SS, cytoplasmic domain CFH90_16130 PF00263 Bacterial type II and III secretion system protein CFH90_16130 PF03958 Bacterial type II/III secretion system short domain CFH90_16135 PF11356 Type II secretion system protein C CFH90_16145 PF00816 H-NS histone family CFH90_16150 PF03061 Thioesterase superfamily CFH90_16170 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CFH90_16170 PF03900 Porphobilinogen deaminase, C-terminal domain CFH90_16175 PF00072 Response regulator receiver domain CFH90_16175 PF04397 LytTr DNA-binding domain CFH90_16180 PF07694 5TMR of 5TMR-LYT CFH90_16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_16180 PF06580 Histidine kinase CFH90_16185 PF14698 Argininosuccinate lyase C-terminal CFH90_16185 PF00206 Lyase CFH90_16190 PF04362 Bacterial Fe(2+) trafficking CFH90_16195 PF01895 PhoU domain CFH90_16200 PF02321 Outer membrane efflux protein CFH90_16210 PF01964 Radical SAM ThiC family CFH90_16210 PF13667 ThiC-associated domain CFH90_16215 PF00293 NUDIX domain CFH90_16220 PF00149 Calcineurin-like phosphoesterase CFH90_16225 PF01258 Prokaryotic dksA/traR C4-type zinc finger CFH90_16230 PF00749 tRNA synthetases class I (E and Q), catalytic domain CFH90_16235 PF01098 Cell cycle protein CFH90_16240 PF08245 Mur ligase middle domain CFH90_16240 PF02875 Mur ligase family, glutamate ligase domain CFH90_16250 PF07664 Ferrous iron transport protein B C terminus CFH90_16250 PF02421 Ferrous iron transport protein B CFH90_16250 PF07670 Nucleoside recognition CFH90_16260 PF00589 Phage integrase family CFH90_16260 PF02899 Phage integrase, N-terminal SAM-like domain CFH90_16265 PF10411 Disulfide bond isomerase protein N-terminus CFH90_16265 PF13098 Thioredoxin-like domain CFH90_16270 PF01842 ACT domain CFH90_16270 PF03447 Homoserine dehydrogenase, NAD binding domain CFH90_16270 PF00742 Homoserine dehydrogenase CFH90_16275 PF00291 Pyridoxal-phosphate dependent enzyme CFH90_16280 PF00768 D-alanyl-D-alanine carboxypeptidase CFH90_16285 PF00196 Bacterial regulatory proteins, luxR family CFH90_16285 PF00072 Response regulator receiver domain CFH90_16290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_16290 PF00512 His Kinase A (phospho-acceptor) domain CFH90_16295 PF00072 Response regulator receiver domain CFH90_16295 PF00158 Sigma-54 interaction domain CFH90_16295 PF02954 Bacterial regulatory protein, Fis family CFH90_16300 PF00595 PDZ domain CFH90_16300 PF03572 Peptidase family S41 CFH90_16305 PF01676 Metalloenzyme superfamily CFH90_16305 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CFH90_16310 PF03739 Lipopolysaccharide export system permease LptF/LptG CFH90_16315 PF03739 Lipopolysaccharide export system permease LptF/LptG CFH90_16320 PF00883 Cytosol aminopeptidase family, catalytic domain CFH90_16320 PF02789 Cytosol aminopeptidase family, N-terminal domain CFH90_16335 PF09335 SNARE associated Golgi protein CFH90_16340 PF00677 Lumazine binding domain CFH90_16350 PF01872 RibD C-terminal domain CFH90_16350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CFH90_16355 PF03477 ATP cone domain CFH90_16360 PF00909 Ammonium Transporter Family CFH90_16365 PF00543 Nitrogen regulatory protein P-II CFH90_16375 PF01078 Magnesium chelatase, subunit ChlI CFH90_16375 PF13335 Magnesium chelatase, subunit ChlI C-terminal CFH90_16390 PF03573 outer membrane porin, OprD family CFH90_16395 PF00719 Inorganic pyrophosphatase CFH90_16410 PF13193 AMP-binding enzyme C-terminal domain CFH90_16410 PF00501 AMP-binding enzyme CFH90_16415 PF00521 DNA gyrase/topoisomerase IV, subunit A CFH90_16415 PF03989 DNA gyrase C-terminal domain, beta-propeller CFH90_16425 PF07690 Major Facilitator Superfamily CFH90_16430 PF03458 UPF0126 domain CFH90_16435 PF02810 SEC-C motif CFH90_16440 PF03741 Integral membrane protein TerC family CFH90_16440 PF03471 Transporter associated domain CFH90_16445 PF03641 Possible lysine decarboxylase CFH90_16460 PF07690 Major Facilitator Superfamily CFH90_16470 PF11798 IMS family HHH motif CFH90_16470 PF11799 impB/mucB/samB family C-terminal domain CFH90_16470 PF00817 impB/mucB/samB family CFH90_16490 PF04055 Radical SAM superfamily CFH90_16490 PF08497 Radical SAM N-terminal CFH90_16490 PF11842 Domain of unknown function (DUF3362) CFH90_16500 PF07687 Peptidase dimerisation domain CFH90_16500 PF01546 Peptidase family M20/M25/M40 CFH90_16540 PF01327 Polypeptide deformylase CFH90_16550 PF02481 DNA recombination-mediator protein A CFH90_16550 PF17782 DprA winged helix domain CFH90_16555 PF01300 Telomere recombination CFH90_16560 PF00892 EamA-like transporter family CFH90_16570 PF00255 Glutathione peroxidase CFH90_16600 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CFH90_16605 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFH90_16605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFH90_16610 PF00231 ATP synthase CFH90_16615 PF00306 ATP synthase alpha/beta chain, C terminal domain CFH90_16615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CFH90_16615 PF02874 ATP synthase alpha/beta family, beta-barrel domain CFH90_16620 PF00213 ATP synthase delta (OSCP) subunit CFH90_16625 PF00430 ATP synthase B/B' CF(0) CFH90_16630 PF00137 ATP synthase subunit C CFH90_16635 PF00119 ATP synthase A chain CFH90_16655 PF00005 ABC transporter CFH90_16660 PF00950 ABC 3 transport family CFH90_16665 PF04463 Protein of unknown function (DUF523) CFH90_16670 PF01810 LysE type translocator CFH90_16675 PF04261 Dyp-type peroxidase family CFH90_16700 PF00877 NlpC/P60 family CFH90_16700 PF01476 LysM domain CFH90_16705 PF16671 Actin cross-linking domain CFH90_16705 PF04717 Type VI secretion system, phage-baseplate injector CFH90_16710 PF03949 Malic enzyme, NAD binding domain CFH90_16710 PF00390 Malic enzyme, N-terminal domain CFH90_16725 PF05746 DALR anticodon binding domain CFH90_16725 PF00750 tRNA synthetases class I (R) CFH90_16725 PF03485 Arginyl tRNA synthetase N terminal domain CFH90_16735 PF00561 alpha/beta hydrolase fold CFH90_16750 PF05726 Pirin C-terminal cupin domain CFH90_16750 PF02678 Pirin CFH90_16755 PF00145 C-5 cytosine-specific DNA methylase CFH90_16765 PF00958 GMP synthase C terminal domain CFH90_16765 PF02540 NAD synthase CFH90_16765 PF00117 Glutamine amidotransferase class-I CFH90_16770 PF04076 Bacterial OB fold (BOF) protein CFH90_16780 PF09335 SNARE associated Golgi protein CFH90_16795 PF13614 AAA domain CFH90_16805 PF01722 BolA-like protein CFH90_16825 PF13443 Cro/C1-type HTH DNA-binding domain CFH90_16855 PF01867 CRISPR associated protein Cas1 CFH90_16960 PF00581 Rhodanese-like domain CFH90_16965 PF01925 Sulfite exporter TauE/SafE CFH90_16970 PF00753 Metallo-beta-lactamase superfamily CFH90_16980 PF04143 Sulphur transport CFH90_16990 PF13098 Thioredoxin-like domain CFH90_16995 PF00578 AhpC/TSA family CFH90_17000 PF02683 Cytochrome C biogenesis protein transmembrane region CFH90_17000 PF11412 Disulphide bond corrector protein DsbC CFH90_17005 PF00486 Transcriptional regulatory protein, C terminal CFH90_17005 PF00072 Response regulator receiver domain CFH90_17010 PF00512 His Kinase A (phospho-acceptor) domain CFH90_17010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CFH90_17010 PF08521 Two-component sensor kinase N-terminal CFH90_17035 PF13657 HipA N-terminal domain CFH90_17035 PF07804 HipA-like C-terminal domain CFH90_17040 PF12419 SNF2 Helicase protein CFH90_17040 PF00271 Helicase conserved C-terminal domain CFH90_17040 PF00176 SNF2 family N-terminal domain CFH90_17080 PF00271 Helicase conserved C-terminal domain CFH90_17080 PF12419 SNF2 Helicase protein CFH90_17080 PF00176 SNF2 family N-terminal domain CFH90_17095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CFH90_17095 PF02378 Phosphotransferase system, EIIC CFH90_17100 PF00294 pfkB family carbohydrate kinase CFH90_17105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CFH90_17105 PF02896 PEP-utilising enzyme, TIM barrel domain CFH90_17105 PF00381 PTS HPr component phosphorylation site CFH90_17105 PF05524 PEP-utilising enzyme, N-terminal CFH90_17105 PF00391 PEP-utilising enzyme, mobile domain CFH90_17110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_17110 PF03466 LysR substrate binding domain CFH90_17115 PF02677 Epoxyqueuosine reductase QueH CFH90_17125 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CFH90_17125 PF00925 GTP cyclohydrolase II CFH90_17130 PF00885 6,7-dimethyl-8-ribityllumazine synthase CFH90_17135 PF01029 NusB family CFH90_17140 PF02769 AIR synthase related protein, C-terminal domain CFH90_17140 PF00586 AIR synthase related protein, N-terminal domain CFH90_17145 PF04608 Phosphatidylglycerophosphatase A CFH90_17150 PF12804 MobA-like NTP transferase domain CFH90_17150 PF14602 Hexapeptide repeat of succinyl-transferase CFH90_17150 PF00132 Bacterial transferase hexapeptide (six repeats) CFH90_17155 PF01380 SIS domain CFH90_17175 PF00665 Integrase core domain CFH90_17180 PF11426 Tn7 transposition regulator TnsC CFH90_17180 PF13401 AAA domain CFH90_17185 PF06527 TniQ CFH90_17185 PF15978 Tn7-like transposition protein D CFH90_17195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CFH90_17195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CFH90_17195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CFH90_17195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CFH90_17200 PF16363 GDP-mannose 4,6 dehydratase CFH90_17205 PF00342 Phosphoglucose isomerase CFH90_17210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CFH90_17210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFH90_17210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFH90_17215 PF00483 Nucleotidyl transferase CFH90_17220 PF02719 Polysaccharide biosynthesis protein CFH90_17225 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFH90_17230 PF17836 PglD N-terminal domain CFH90_17230 PF14602 Hexapeptide repeat of succinyl-transferase CFH90_17230 PF00132 Bacterial transferase hexapeptide (six repeats) CFH90_17235 PF02397 Bacterial sugar transferase CFH90_17240 PF00534 Glycosyl transferases group 1 CFH90_17240 PF13477 Glycosyl transferase 4-like CFH90_17250 PF00733 Asparagine synthase CFH90_17250 PF13537 Glutamine amidotransferase domain CFH90_17260 PF13439 Glycosyltransferase Family 4 CFH90_17260 PF00534 Glycosyl transferases group 1 CFH90_17275 PF12464 Maltose acetyltransferase CFH90_17275 PF00132 Bacterial transferase hexapeptide (six repeats) CFH90_17285 PF02348 Cytidylyltransferase CFH90_17290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CFH90_17290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CFH90_17295 PF00483 Nucleotidyl transferase CFH90_17305 PF08666 SAF domain CFH90_17305 PF03102 NeuB family CFH90_17310 PF02350 UDP-N-acetylglucosamine 2-epimerase CFH90_17315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CFH90_17320 PF02719 Polysaccharide biosynthesis protein CFH90_17325 PF01943 Polysaccharide biosynthesis protein CFH90_17330 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CFH90_17335 PF00483 Nucleotidyl transferase CFH90_17340 PF04321 RmlD substrate binding domain CFH90_17345 PF16363 GDP-mannose 4,6 dehydratase CFH90_17350 PF01370 NAD dependent epimerase/dehydratase family CFH90_17355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CFH90_17355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CFH90_17355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CFH90_17365 PF10531 SLBB domain CFH90_17365 PF02563 Polysaccharide biosynthesis/export protein CFH90_17365 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CFH90_17370 PF01451 Low molecular weight phosphotyrosine protein phosphatase CFH90_17375 PF13614 AAA domain CFH90_17375 PF13807 G-rich domain on putative tyrosine kinase CFH90_17375 PF02706 Chain length determinant protein CFH90_17380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFH90_17380 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CFH90_17385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CFH90_17385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFH90_17390 PF03023 Lipid II flippase MurJ CFH90_17395 PF01510 N-acetylmuramoyl-L-alanine amidase CFH90_17400 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CFH90_17400 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CFH90_17405 PF01138 3' exoribonuclease family, domain 1 CFH90_17405 PF03725 3' exoribonuclease family, domain 2 CFH90_17410 PF00440 Bacterial regulatory proteins, tetR family CFH90_17415 PF11846 Virulence factor membrane-bound polymerase, C-terminal CFH90_17415 PF04932 O-Antigen ligase CFH90_17415 PF15864 Protein glycosylation ligase CFH90_17420 PF01323 DSBA-like thioredoxin domain CFH90_17430 PF13419 Haloacid dehalogenase-like hydrolase CFH90_17435 PF00106 short chain dehydrogenase CFH90_17455 PF00583 Acetyltransferase (GNAT) family CFH90_17455 PF00696 Amino acid kinase family CFH90_17460 PF09084 NMT1/THI5 like CFH90_17465 PF09084 NMT1/THI5 like CFH90_17470 PF00296 Luciferase-like monooxygenase CFH90_17475 PF00528 Binding-protein-dependent transport system inner membrane component CFH90_17480 PF00005 ABC transporter CFH90_17485 PF08362 YcdC-like protein, C-terminal region CFH90_17485 PF00440 Bacterial regulatory proteins, tetR family CFH90_17500 PF06574 FAD synthetase CFH90_17500 PF01687 Riboflavin kinase CFH90_17505 PF06827 Zinc finger found in FPG and IleRS CFH90_17505 PF00133 tRNA synthetases class I (I, L, M and V) CFH90_17505 PF08264 Anticodon-binding domain of tRNA CFH90_17510 PF01252 Signal peptidase (SPase) II CFH90_17515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CFH90_17530 PF07995 Glucose / Sorbosone dehydrogenase CFH90_17570 PF00579 tRNA synthetases class I (W and Y) CFH90_17575 PF03702 Anhydro-N-acetylmuramic acid kinase CFH90_17580 PF13406 Transglycosylase SLT domain CFH90_17585 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CFH90_17585 PF02222 ATP-grasp domain CFH90_17590 PF00731 AIR carboxylase CFH90_17600 PF08245 Mur ligase middle domain CFH90_17600 PF01225 Mur ligase family, catalytic domain CFH90_17600 PF02875 Mur ligase family, glutamate ligase domain CFH90_17620 PF03741 Integral membrane protein TerC family CFH90_17640 PF01979 Amidohydrolase family CFH90_17645 PF00156 Phosphoribosyl transferase domain CFH90_17655 PF13098 Thioredoxin-like domain CFH90_17655 PF10411 Disulfide bond isomerase protein N-terminus CFH90_17660 PF16916 Dimerisation domain of Zinc Transporter CFH90_17660 PF01545 Cation efflux family CFH90_17665 PF02583 Metal-sensitive transcriptional repressor CFH90_17670 PF07690 Major Facilitator Superfamily CFH90_17675 PF01926 50S ribosome-binding GTPase CFH90_17675 PF12631 MnmE helical domain CFH90_17675 PF10396 GTP-binding protein TrmE N-terminus CFH90_17680 PF14849 YidC periplasmic domain CFH90_17680 PF02096 60Kd inner membrane protein CFH90_17685 PF01809 Putative membrane protein insertion efficiency factor CFH90_17690 PF00825 Ribonuclease P CFH90_17695 PF00468 Ribosomal protein L34 CFH90_17745 PF00881 Nitroreductase family CFH90_17760 PF02830 V4R domain CFH90_17760 PF02954 Bacterial regulatory protein, Fis family CFH90_17760 PF06505 Activator of aromatic catabolism CFH90_17760 PF00158 Sigma-54 interaction domain CFH90_17765 PF06099 Phenol hydroxylase subunit CFH90_17770 PF02332 Methane/Phenol/Toluene Hydroxylase CFH90_17775 PF02406 MmoB/DmpM family CFH90_17780 PF04945 YHS domain CFH90_17780 PF02332 Methane/Phenol/Toluene Hydroxylase CFH90_17790 PF00175 Oxidoreductase NAD-binding domain CFH90_17790 PF00111 2Fe-2S iron-sulfur cluster binding domain CFH90_17790 PF00970 Oxidoreductase FAD-binding domain CFH90_17815 PF00355 Rieske [2Fe-2S] domain CFH90_17830 PF00175 Oxidoreductase NAD-binding domain CFH90_17830 PF00111 2Fe-2S iron-sulfur cluster binding domain CFH90_17835 PF03466 LysR substrate binding domain CFH90_17835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_17845 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CFH90_17850 PF12146 Serine aminopeptidase, S33 CFH90_17855 PF00108 Thiolase, N-terminal domain CFH90_17855 PF02803 Thiolase, C-terminal domain CFH90_17860 PF01144 Coenzyme A transferase CFH90_17865 PF01144 Coenzyme A transferase CFH90_17870 PF02426 Muconolactone delta-isomerase CFH90_17875 PF13378 Enolase C-terminal domain-like CFH90_17875 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CFH90_17880 PF03466 LysR substrate binding domain CFH90_17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CFH90_17885 PF01926 50S ribosome-binding GTPase CFH90_17890 PF01926 50S ribosome-binding GTPase CFH90_17895 PF00775 Dioxygenase CFH90_17895 PF04444 Catechol dioxygenase N terminus CFH90_17930 PF00817 impB/mucB/samB family CFH90_17930 PF13438 Domain of unknown function (DUF4113) CFH90_17930 PF11799 impB/mucB/samB family C-terminal domain CFH90_17945 PF13356 Arm DNA-binding domain CFH90_17945 PF00589 Phage integrase family CFH90_18015 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFH90_18020 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CFH90_18020 PF01118 Semialdehyde dehydrogenase, NAD binding domain CFH90_18025 PF07836 DmpG-like communication domain CFH90_18025 PF00682 HMGL-like CFH90_18030 PF01557 Fumarylacetoacetate (FAA) hydrolase family CFH90_18070 PF03389 MobA/MobL family CFH90_18080 PF01051 Initiator Replication protein CFH90_18090 PF00916 Sulfate permease family CFH90_18090 PF01740 STAS domain CFH90_18100 PF05973 Phage derived protein Gp49-like (DUF891) CFH90_18115 PF00313 'Cold-shock' DNA-binding domain CFH90_18135 PF00199 Catalase CFH90_18135 PF06628 Catalase-related immune-responsive CFH90_18155 PF08946 Osmosensory transporter coiled coil CFH90_18155 PF00083 Sugar (and other) transporter CFH90_18175 PF13614 AAA domain CFH90_18180 PF02796 Helix-turn-helix domain of resolvase CFH90_18180 PF00239 Resolvase, N terminal domain CFH90_18185 PF00376 MerR family regulatory protein CFH90_18185 PF13614 AAA domain CFH90_18220 PF01252 Signal peptidase (SPase) II CFH90_18230 PF13411 MerR HTH family regulatory protein CFH90_18235 PF00111 2Fe-2S iron-sulfur cluster binding domain CFH90_18235 PF00175 Oxidoreductase NAD-binding domain CFH90_18235 PF00970 Oxidoreductase FAD-binding domain CFH90_18245 PF00355 Rieske [2Fe-2S] domain CFH90_18250 PF12697 Alpha/beta hydrolase family CFH90_18265 PF00355 Rieske [2Fe-2S] domain CFH90_18265 PF11723 Homotrimeric ring hydroxylase CFH90_18325 PF04221 RelB antitoxin CFH90_18355 PF03741 Integral membrane protein TerC family CFH90_18365 PF01051 Initiator Replication protein