locus-tag class description RZ95_00005 PF00308 Bacterial dnaA protein RZ95_00005 PF11638 DnaA N-terminal domain RZ95_00005 PF08299 Bacterial dnaA protein helix-turn-helix RZ95_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain RZ95_00010 PF02767 DNA polymerase III beta subunit, central domain RZ95_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain RZ95_00015 PF02463 RecF/RecN/SMC N terminal domain RZ95_00020 PF00204 DNA gyrase B RZ95_00020 PF18053 DNA gyrase B subunit insert domain RZ95_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_00020 PF01751 Toprim domain RZ95_00020 PF00986 DNA gyrase B subunit, carboxyl terminus RZ95_00030 PF12848 ABC transporter RZ95_00030 PF00005 ABC transporter RZ95_00050 PF01521 Iron-sulphur cluster biosynthesis RZ95_00065 PF00905 Penicillin binding protein transpeptidase domain RZ95_00080 PF00012 Hsp70 protein RZ95_00085 PF01025 GrpE RZ95_00100 PF07859 alpha/beta hydrolase fold RZ95_00110 PF01797 Transposase IS200 like RZ95_00120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RZ95_00150 PF07690 Major Facilitator Superfamily RZ95_00160 PF00209 Sodium:neurotransmitter symporter family RZ95_00180 PF01189 16S rRNA methyltransferase RsmB/F RZ95_00180 PF01029 NusB family RZ95_00185 PF00551 Formyl transferase RZ95_00185 PF02911 Formyl transferase, C-terminal domain RZ95_00190 PF00920 Dehydratase family RZ95_00195 PF00920 Dehydratase family RZ95_00205 PF00593 TonB dependent receptor RZ95_00205 PF07715 TonB-dependent Receptor Plug Domain RZ95_00215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_00215 PF03466 LysR substrate binding domain RZ95_00220 PF00860 Permease family RZ95_00225 PF00311 Phosphoenolpyruvate carboxylase RZ95_00230 PF00440 Bacterial regulatory proteins, tetR family RZ95_00235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RZ95_00240 PF00873 AcrB/AcrD/AcrF family RZ95_00250 PF00684 DnaJ central domain RZ95_00250 PF00226 DnaJ domain RZ95_00250 PF01556 DnaJ C terminal domain RZ95_00260 PF01113 Dihydrodipicolinate reductase, N-terminus RZ95_00260 PF05173 Dihydrodipicolinate reductase, C-terminus RZ95_00275 PF00155 Aminotransferase class I and II RZ95_00280 PF00107 Zinc-binding dehydrogenase RZ95_00280 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_00285 PF03352 Methyladenine glycosylase RZ95_00300 PF00633 Helix-hairpin-helix motif RZ95_00300 PF00730 HhH-GPD superfamily base excision DNA repair protein RZ95_00300 PF14815 NUDIX domain RZ95_00315 PF07043 Protein of unknown function (DUF1328) RZ95_00320 PF03692 Putative zinc- or iron-chelating domain RZ95_00325 PF00004 ATPase family associated with various cellular activities (AAA) RZ95_00325 PF16193 AAA C-terminal domain RZ95_00325 PF12002 MgsA AAA+ ATPase C terminal RZ95_00330 PF01797 Transposase IS200 like RZ95_00340 PF01810 LysE type translocator RZ95_00350 PF00005 ABC transporter RZ95_00355 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_00360 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_00365 PF00497 Bacterial extracellular solute-binding proteins, family 3 RZ95_00375 PF01259 SAICAR synthetase RZ95_00385 PF00701 Dihydrodipicolinate synthetase family RZ95_00400 PF01758 Sodium Bile acid symporter family RZ95_00405 PF13089 Polyphosphate kinase N-terminal domain RZ95_00405 PF02503 Polyphosphate kinase middle domain RZ95_00405 PF13090 Polyphosphate kinase C-terminal domain 2 RZ95_00405 PF17941 Polyphosphate kinase C-terminal domain 1 RZ95_00430 PF01609 Transposase DDE domain RZ95_00430 PF13006 Insertion element 4 transposase N-terminal RZ95_00435 PF02580 D-Tyr-tRNA(Tyr) deacylase RZ95_00440 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RZ95_00440 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RZ95_00445 PF00581 Rhodanese-like domain RZ95_00450 PF02666 Phosphatidylserine decarboxylase RZ95_00455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_00455 PF11808 Phosphate regulon sensor protein PhoR RZ95_00455 PF00989 PAS fold RZ95_00455 PF00512 His Kinase A (phospho-acceptor) domain RZ95_00460 PF00072 Response regulator receiver domain RZ95_00460 PF00486 Transcriptional regulatory protein, C terminal RZ95_00470 PF00106 short chain dehydrogenase RZ95_00475 PF01554 MatE RZ95_00480 PF00155 Aminotransferase class I and II RZ95_00485 PF04286 Protein of unknown function (DUF445) RZ95_00500 PF04262 Glutamate-cysteine ligase RZ95_00505 PF02600 Disulfide bond formation protein DsbB RZ95_00515 PF05728 Uncharacterised protein family (UPF0227) RZ95_00520 PF01751 Toprim domain RZ95_00520 PF00204 DNA gyrase B RZ95_00520 PF00986 DNA gyrase B subunit, carboxyl terminus RZ95_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_00530 PF02653 Branched-chain amino acid transport system / permease component RZ95_00540 PF12399 Branched-chain amino acid ATP-binding cassette transporter RZ95_00540 PF00005 ABC transporter RZ95_00545 PF00005 ABC transporter RZ95_00585 PF02683 Cytochrome C biogenesis protein transmembrane region RZ95_00585 PF11412 Disulphide bond corrector protein DsbC RZ95_00595 PF17151 Periplasmic sensor domain RZ95_00595 PF00990 Diguanylate cyclase, GGDEF domain RZ95_00600 PF02525 Flavodoxin-like fold RZ95_00605 PF07859 alpha/beta hydrolase fold RZ95_00615 PF03960 ArsC family RZ95_00620 PF03372 Endonuclease/Exonuclease/phosphatase family RZ95_00625 PF00156 Phosphoribosyl transferase domain RZ95_00630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RZ95_00630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RZ95_00635 PF07715 TonB-dependent Receptor Plug Domain RZ95_00635 PF00593 TonB dependent receptor RZ95_00645 PF01047 MarR family RZ95_00650 PF00255 Glutathione peroxidase RZ95_00655 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RZ95_00655 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RZ95_00660 PF03033 Glycosyltransferase family 28 N-terminal domain RZ95_00660 PF04101 Glycosyltransferase family 28 C-terminal domain RZ95_00665 PF01225 Mur ligase family, catalytic domain RZ95_00665 PF02875 Mur ligase family, glutamate ligase domain RZ95_00665 PF08245 Mur ligase middle domain RZ95_00670 PF01820 D-ala D-ala ligase N-terminus RZ95_00670 PF07478 D-ala D-ala ligase C-terminus RZ95_00675 PF03799 Cell division protein FtsQ RZ95_00675 PF08478 POTRA domain, FtsQ-type RZ95_00680 PF02491 SHS2 domain inserted in FTSA RZ95_00685 PF12327 FtsZ family, C-terminal domain RZ95_00685 PF00091 Tubulin/FtsZ family, GTPase domain RZ95_00690 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RZ95_00705 PF00456 Transketolase, thiamine diphosphate binding domain RZ95_00705 PF17831 Pyruvate dehydrogenase E1 component middle domain RZ95_00710 PF00364 Biotin-requiring enzyme RZ95_00710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RZ95_00710 PF02817 e3 binding domain RZ95_00715 PF01169 Uncharacterized protein family UPF0016 RZ95_00720 PF00258 Flavodoxin RZ95_00720 PF01613 Flavin reductase like domain RZ95_00725 PF03692 Putative zinc- or iron-chelating domain RZ95_00730 PF00478 IMP dehydrogenase / GMP reductase domain RZ95_00730 PF00571 CBS domain RZ95_00735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RZ95_00735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RZ95_00735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RZ95_00735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RZ95_00740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RZ95_00740 PF01243 Pyridoxamine 5'-phosphate oxidase RZ95_00745 PF01368 DHH family RZ95_00745 PF02272 DHHA1 domain RZ95_00745 PF17768 RecJ OB domain RZ95_00760 PF00472 RF-1 domain RZ95_00760 PF03462 PCRF domain RZ95_00770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RZ95_00775 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RZ95_00780 PF04452 RNA methyltransferase RZ95_00785 PF00924 Mechanosensitive ion channel RZ95_00790 PF00501 AMP-binding enzyme RZ95_00790 PF16177 Acetyl-coenzyme A synthetase N-terminus RZ95_00790 PF13193 AMP-binding enzyme C-terminal domain RZ95_00795 PF00677 Lumazine binding domain RZ95_00810 PF00296 Luciferase-like monooxygenase RZ95_00815 PF03358 NADPH-dependent FMN reductase RZ95_00820 PF00072 Response regulator receiver domain RZ95_00820 PF00196 Bacterial regulatory proteins, luxR family RZ95_00830 PF00072 Response regulator receiver domain RZ95_00830 PF09456 RcsC Alpha-Beta-Loop (ABL) RZ95_00830 PF00512 His Kinase A (phospho-acceptor) domain RZ95_00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_00835 PF04341 Protein of unknown function, DUF485 RZ95_00840 PF00474 Sodium:solute symporter family RZ95_00875 PF00990 Diguanylate cyclase, GGDEF domain RZ95_00875 PF17158 Membrane-associated sensor, integral membrane domain RZ95_00885 PF17760 UvrA interaction domain RZ95_00885 PF17755 UvrA DNA-binding domain RZ95_00895 PF08543 Phosphomethylpyrimidine kinase RZ95_00895 PF03070 TENA/THI-4/PQQC family RZ95_00895 PF02581 Thiamine monophosphate synthase RZ95_00910 PF07690 Major Facilitator Superfamily RZ95_00915 PF00436 Single-strand binding protein family RZ95_00920 PF13737 Transposase DDE domain RZ95_00940 PF13936 Helix-turn-helix domain RZ95_00940 PF00665 Integrase core domain RZ95_00945 PF13683 Integrase core domain RZ95_00945 PF13276 HTH-like domain RZ95_00950 PF01527 Transposase RZ95_00965 PF07731 Multicopper oxidase RZ95_00965 PF07732 Multicopper oxidase RZ95_00965 PF00394 Multicopper oxidase RZ95_00975 PF00486 Transcriptional regulatory protein, C terminal RZ95_00975 PF00072 Response regulator receiver domain RZ95_00980 PF00672 HAMP domain RZ95_00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_00980 PF00512 His Kinase A (phospho-acceptor) domain RZ95_00985 PF13194 Domain of unknown function (DUF4010) RZ95_01030 PF13610 DDE domain RZ95_01040 PF07664 Ferrous iron transport protein B C terminus RZ95_01040 PF02421 Ferrous iron transport protein B RZ95_01040 PF07670 Nucleoside recognition RZ95_01050 PF01545 Cation efflux family RZ95_01055 PF13411 MerR HTH family regulatory protein RZ95_01075 PF10415 Fumarase C C-terminus RZ95_01075 PF00206 Lyase RZ95_01080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_01080 PF03466 LysR substrate binding domain RZ95_01085 PF00375 Sodium:dicarboxylate symporter family RZ95_01100 PF01717 Cobalamin-independent synthase, Catalytic domain RZ95_01100 PF08267 Cobalamin-independent synthase, N-terminal domain RZ95_01105 PF01613 Flavin reductase like domain RZ95_01110 PF10417 C-terminal domain of 1-Cys peroxiredoxin RZ95_01110 PF00578 AhpC/TSA family RZ95_01115 PF05726 Pirin C-terminal cupin domain RZ95_01115 PF02678 Pirin RZ95_01120 PF01593 Flavin containing amine oxidoreductase RZ95_01195 PF13356 Arm DNA-binding domain RZ95_01195 PF00589 Phage integrase family RZ95_01205 PF02705 K+ potassium transporter RZ95_01225 PF00230 Major intrinsic protein RZ95_01245 PF00977 Histidine biosynthesis protein RZ95_01250 PF01636 Phosphotransferase enzyme family RZ95_01255 PF00313 'Cold-shock' DNA-binding domain RZ95_01270 PF00324 Amino acid permease RZ95_01275 PF01266 FAD dependent oxidoreductase RZ95_01285 PF01381 Helix-turn-helix RZ95_01290 PF00977 Histidine biosynthesis protein RZ95_01305 PF00117 Glutamine amidotransferase class-I RZ95_01310 PF00475 Imidazoleglycerol-phosphate dehydratase RZ95_01335 PF00583 Acetyltransferase (GNAT) family RZ95_01340 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RZ95_01340 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RZ95_01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_01345 PF00512 His Kinase A (phospho-acceptor) domain RZ95_01345 PF00672 HAMP domain RZ95_01350 PF00486 Transcriptional regulatory protein, C terminal RZ95_01350 PF00072 Response regulator receiver domain RZ95_01355 PF00575 S1 RNA binding domain RZ95_01355 PF17674 HHH domain RZ95_01355 PF09371 Tex-like protein N-terminal domain RZ95_01355 PF16921 Tex protein YqgF-like domain RZ95_01370 PF00106 short chain dehydrogenase RZ95_01375 PF01053 Cys/Met metabolism PLP-dependent enzyme RZ95_01380 PF00005 ABC transporter RZ95_01380 PF12848 ABC transporter RZ95_01405 PF00749 tRNA synthetases class I (E and Q), catalytic domain RZ95_01425 PF01795 MraW methylase family RZ95_01435 PF00905 Penicillin binding protein transpeptidase domain RZ95_01435 PF03717 Penicillin-binding Protein dimerisation domain RZ95_01440 PF02875 Mur ligase family, glutamate ligase domain RZ95_01440 PF01225 Mur ligase family, catalytic domain RZ95_01440 PF08245 Mur ligase middle domain RZ95_01445 PF08245 Mur ligase middle domain RZ95_01445 PF01225 Mur ligase family, catalytic domain RZ95_01445 PF02875 Mur ligase family, glutamate ligase domain RZ95_01450 PF00953 Glycosyl transferase family 4 RZ95_01455 PF13847 Methyltransferase domain RZ95_01495 PF03958 Bacterial type II/III secretion system short domain RZ95_01495 PF11741 AMIN domain RZ95_01495 PF07660 Secretin and TonB N terminus short domain RZ95_01495 PF00263 Bacterial type II and III secretion system protein RZ95_01500 PF01202 Shikimate kinase RZ95_01505 PF01761 3-dehydroquinate synthase RZ95_01515 PF01645 Conserved region in glutamate synthase RZ95_01515 PF00310 Glutamine amidotransferases class-II RZ95_01515 PF04898 Glutamate synthase central domain RZ95_01515 PF01493 GXGXG motif RZ95_01520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RZ95_01520 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_01530 PF04011 LemA family RZ95_01535 PF04536 TPM domain RZ95_01555 PF13737 Transposase DDE domain RZ95_01560 PF13007 Transposase C of IS166 homeodomain RZ95_01560 PF13817 IS66 C-terminal element RZ95_01560 PF13005 zinc-finger binding domain of transposase IS66 RZ95_01560 PF03050 Transposase IS66 family RZ95_01575 PF00210 Ferritin-like domain RZ95_01580 PF04324 BFD-like [2Fe-2S] binding domain RZ95_01585 PF01042 Endoribonuclease L-PSP RZ95_01590 PF02824 TGS domain RZ95_01590 PF13291 ACT domain RZ95_01590 PF04607 Region found in RelA / SpoT proteins RZ95_01595 PF01192 RNA polymerase Rpb6 RZ95_01600 PF00625 Guanylate kinase RZ95_01605 PF02401 LytB protein RZ95_01610 PF13737 Transposase DDE domain RZ95_01615 PF00886 Ribosomal protein S16 RZ95_01620 PF05239 PRC-barrel domain RZ95_01620 PF01782 RimM N-terminal domain RZ95_01625 PF01746 tRNA (Guanine-1)-methyltransferase RZ95_01630 PF01245 Ribosomal protein L19 RZ95_01635 PF00561 alpha/beta hydrolase fold RZ95_01645 PF13358 DDE superfamily endonuclease RZ95_01655 PF00561 alpha/beta hydrolase fold RZ95_01660 PF03280 Proteobacterial lipase chaperone protein RZ95_01665 PF01509 TruB family pseudouridylate synthase (N terminal domain) RZ95_01665 PF16198 tRNA pseudouridylate synthase B C-terminal domain RZ95_01665 PF09157 Pseudouridine synthase II TruB, C-terminal RZ95_01670 PF01925 Sulfite exporter TauE/SafE RZ95_01680 PF00892 EamA-like transporter family RZ95_01685 PF00892 EamA-like transporter family RZ95_01690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RZ95_01690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RZ95_01695 PF02913 FAD linked oxidases, C-terminal domain RZ95_01695 PF01565 FAD binding domain RZ95_01710 PF05726 Pirin C-terminal cupin domain RZ95_01710 PF02678 Pirin RZ95_01715 PF07690 Major Facilitator Superfamily RZ95_01720 PF12823 Domain of unknown function (DUF3817) RZ95_01725 PF12805 FUSC-like inner membrane protein yccS RZ95_01730 PF00080 Copper/zinc superoxide dismutase (SODC) RZ95_01735 PF01594 AI-2E family transporter RZ95_01740 PF13614 AAA domain RZ95_01750 PF01209 ubiE/COQ5 methyltransferase family RZ95_01765 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RZ95_01770 PF01197 Ribosomal protein L31 RZ95_01775 PF03109 ABC1 family RZ95_01785 PF01554 MatE RZ95_01795 PF06969 HemN C-terminal domain RZ95_01795 PF04055 Radical SAM superfamily RZ95_01805 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_01805 PF12806 Acetyl-CoA dehydrogenase C-terminal like RZ95_01805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_01805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_01820 PF01488 Shikimate / quinate 5-dehydrogenase RZ95_01820 PF08501 Shikimate dehydrogenase substrate binding domain RZ95_01820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RZ95_01835 PF06969 HemN C-terminal domain RZ95_01835 PF04055 Radical SAM superfamily RZ95_01840 PF00925 GTP cyclohydrolase II RZ95_01845 PF02780 Transketolase, C-terminal domain RZ95_01845 PF02779 Transketolase, pyrimidine binding domain RZ95_01845 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RZ95_01850 PF00459 Inositol monophosphatase family RZ95_01855 PF00270 DEAD/DEAH box helicase RZ95_01855 PF00271 Helicase conserved C-terminal domain RZ95_01860 PF00005 ABC transporter RZ95_01865 PF02405 Permease MlaE RZ95_01870 PF02470 MlaD protein RZ95_01875 PF05494 MlaC protein RZ95_01885 PF01544 CorA-like Mg2+ transporter protein RZ95_01890 PF03641 Possible lysine decarboxylase RZ95_01895 PF00293 NUDIX domain RZ95_01900 PF00156 Phosphoribosyl transferase domain RZ95_01905 PF00270 DEAD/DEAH box helicase RZ95_01905 PF00271 Helicase conserved C-terminal domain RZ95_01905 PF17191 RecG wedge domain RZ95_01920 PF02796 Helix-turn-helix domain of resolvase RZ95_01920 PF00665 Integrase core domain RZ95_01925 PF01695 IstB-like ATP binding protein RZ95_01935 PF01553 Acyltransferase RZ95_01945 PF00375 Sodium:dicarboxylate symporter family RZ95_01955 PF01926 50S ribosome-binding GTPase RZ95_01960 PF02082 Transcriptional regulator RZ95_01965 PF00175 Oxidoreductase NAD-binding domain RZ95_01965 PF00042 Globin RZ95_01965 PF00970 Oxidoreductase FAD-binding domain RZ95_01970 PF05872 Bacterial protein of unknown function (DUF853) RZ95_01975 PF01053 Cys/Met metabolism PLP-dependent enzyme RZ95_01980 PF00117 Glutamine amidotransferase class-I RZ95_01985 PF00338 Ribosomal protein S10p/S20e RZ95_01990 PF00297 Ribosomal protein L3 RZ95_01995 PF00573 Ribosomal protein L4/L1 family RZ95_02000 PF00276 Ribosomal protein L23 RZ95_02005 PF00181 Ribosomal Proteins L2, RNA binding domain RZ95_02005 PF03947 Ribosomal Proteins L2, C-terminal domain RZ95_02010 PF00203 Ribosomal protein S19 RZ95_02015 PF00237 Ribosomal protein L22p/L17e RZ95_02020 PF00189 Ribosomal protein S3, C-terminal domain RZ95_02020 PF07650 KH domain RZ95_02025 PF00252 Ribosomal protein L16p/L10e RZ95_02030 PF00831 Ribosomal L29 protein RZ95_02035 PF00366 Ribosomal protein S17 RZ95_02040 PF00238 Ribosomal protein L14p/L23e RZ95_02045 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RZ95_02045 PF00467 KOW motif RZ95_02050 PF00673 ribosomal L5P family C-terminus RZ95_02050 PF00281 Ribosomal protein L5 RZ95_02055 PF00253 Ribosomal protein S14p/S29e RZ95_02060 PF00410 Ribosomal protein S8 RZ95_02065 PF00347 Ribosomal protein L6 RZ95_02070 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RZ95_02075 PF00333 Ribosomal protein S5, N-terminal domain RZ95_02075 PF03719 Ribosomal protein S5, C-terminal domain RZ95_02080 PF00327 Ribosomal protein L30p/L7e RZ95_02085 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RZ95_02090 PF00344 SecY translocase RZ95_02095 PF00444 Ribosomal protein L36 RZ95_02100 PF00416 Ribosomal protein S13/S18 RZ95_02105 PF00411 Ribosomal protein S11 RZ95_02110 PF00163 Ribosomal protein S4/S9 N-terminal domain RZ95_02110 PF01479 S4 domain RZ95_02115 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RZ95_02115 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RZ95_02115 PF01000 RNA polymerase Rpb3/RpoA insert domain RZ95_02120 PF01196 Ribosomal protein L17 RZ95_02125 PF00743 Flavin-binding monooxygenase-like RZ95_02135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_02135 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_02135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_02140 PF03937 Flavinator of succinate dehydrogenase RZ95_02170 PF09526 Probable metal-binding protein (DUF2387) RZ95_02175 PF01432 Peptidase family M3 RZ95_02180 PF04294 VanW like protein RZ95_02185 PF00575 S1 RNA binding domain RZ95_02185 PF08206 Ribonuclease B OB domain RZ95_02185 PF08461 Ribonuclease R winged-helix domain RZ95_02185 PF17876 Cold shock domain RZ95_02185 PF00773 RNB domain RZ95_02215 PF01557 Fumarylacetoacetate (FAA) hydrolase family RZ95_02230 PF03631 Virulence factor BrkB RZ95_02235 PF03358 NADPH-dependent FMN reductase RZ95_02245 PF00990 Diguanylate cyclase, GGDEF domain RZ95_02245 PF07694 5TMR of 5TMR-LYT RZ95_02275 PF02130 Uncharacterized protein family UPF0054 RZ95_02280 PF02562 PhoH-like protein RZ95_02285 PF00919 Uncharacterized protein family UPF0004 RZ95_02285 PF04055 Radical SAM superfamily RZ95_02285 PF01938 TRAM domain RZ95_02290 PF01551 Peptidase family M23 RZ95_02290 PF01464 Transglycosylase SLT domain RZ95_02290 PF10145 Phage-related minor tail protein RZ95_02300 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RZ95_02300 PF00056 lactate/malate dehydrogenase, NAD binding domain RZ95_02325 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RZ95_02330 PF01066 CDP-alcohol phosphatidyltransferase RZ95_02365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RZ95_02365 PF00403 Heavy-metal-associated domain RZ95_02365 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_02375 PF04273 Putative phosphatase (DUF442) RZ95_02375 PF00753 Metallo-beta-lactamase superfamily RZ95_02385 PF00085 Thioredoxin RZ95_02390 PF03061 Thioesterase superfamily RZ95_02405 PF04461 Protein of unknown function (DUF520) RZ95_02415 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RZ95_02415 PF01266 FAD dependent oxidoreductase RZ95_02425 PF03795 YCII-related domain RZ95_02430 PF04279 Intracellular septation protein A RZ95_02435 PF02811 PHP domain RZ95_02440 PF01062 Bestrophin, RFP-TM, chloride channel RZ95_02445 PF04002 RadC-like JAB domain RZ95_02450 PF04127 DNA / pantothenate metabolism flavoprotein RZ95_02450 PF02441 Flavoprotein RZ95_02460 PF02556 Preprotein translocase subunit SecB RZ95_02465 PF00462 Glutaredoxin RZ95_02475 PF03193 RsgA GTPase RZ95_02480 PF00929 Exonuclease RZ95_02515 PF02321 Outer membrane efflux protein RZ95_02525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RZ95_02540 PF09334 tRNA synthetases class I (M) RZ95_02540 PF13603 Leucyl-tRNA synthetase, Domain 2 RZ95_02540 PF08264 Anticodon-binding domain of tRNA RZ95_02540 PF00133 tRNA synthetases class I (I, L, M and V) RZ95_02550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RZ95_02550 PF00205 Thiamine pyrophosphate enzyme, central domain RZ95_02550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RZ95_02555 PF10369 Small subunit of acetolactate synthase RZ95_02560 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RZ95_02560 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RZ95_02585 PF00534 Glycosyl transferases group 1 RZ95_02585 PF13439 Glycosyltransferase Family 4 RZ95_02590 PF01569 PAP2 superfamily RZ95_02595 PF04384 Iron-sulphur cluster assembly RZ95_02600 PF00334 Nucleoside diphosphate kinase RZ95_02605 PF04055 Radical SAM superfamily RZ95_02615 PF13464 Domain of unknown function (DUF4115) RZ95_02620 PF04551 GcpE protein RZ95_02625 PF13393 Histidyl-tRNA synthetase RZ95_02625 PF03129 Anticodon binding domain RZ95_02635 PF13360 PQQ-like domain RZ95_02635 PF01011 PQQ enzyme repeat RZ95_02640 PF01926 50S ribosome-binding GTPase RZ95_02640 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RZ95_02645 PF01648 4'-phosphopantetheinyl transferase superfamily RZ95_02650 PF02355 Protein export membrane protein RZ95_02650 PF07549 SecD/SecF GG Motif RZ95_02655 PF07549 SecD/SecF GG Motif RZ95_02655 PF13721 SecD export protein N-terminal TM region RZ95_02655 PF02355 Protein export membrane protein RZ95_02660 PF02699 Preprotein translocase subunit RZ95_02665 PF01702 Queuine tRNA-ribosyltransferase RZ95_02675 PF07282 Putative transposase DNA-binding domain RZ95_02675 PF12323 Helix-turn-helix domain RZ95_02675 PF01385 Probable transposase RZ95_02685 PF02547 Queuosine biosynthesis protein RZ95_02695 PF13356 Arm DNA-binding domain RZ95_02695 PF00589 Phage integrase family RZ95_02750 PF00512 His Kinase A (phospho-acceptor) domain RZ95_02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_02750 PF13426 PAS domain RZ95_02750 PF00672 HAMP domain RZ95_02755 PF03710 Glutamate-ammonia ligase adenylyltransferase RZ95_02755 PF08335 GlnD PII-uridylyltransferase RZ95_02760 PF01063 Amino-transferase class IV RZ95_02765 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RZ95_02765 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RZ95_02775 PF17101 Stealth protein CR1, conserved region 1 RZ95_02775 PF11380 Stealth protein CR2, conserved region 2 RZ95_02775 PF17102 Stealth protein CR3, conserved region 3 RZ95_02810 PF01757 Acyltransferase family RZ95_02825 PF02938 GAD domain RZ95_02825 PF01336 OB-fold nucleic acid binding domain RZ95_02825 PF00152 tRNA synthetases class II (D, K and N) RZ95_02835 PF07715 TonB-dependent Receptor Plug Domain RZ95_02835 PF00593 TonB dependent receptor RZ95_02855 PF06146 Phosphate-starvation-inducible E RZ95_02860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_02860 PF12806 Acetyl-CoA dehydrogenase C-terminal like RZ95_02860 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_02860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_02865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_02865 PF12806 Acetyl-CoA dehydrogenase C-terminal like RZ95_02865 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_02865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_02875 PF00512 His Kinase A (phospho-acceptor) domain RZ95_02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_02875 PF00672 HAMP domain RZ95_02880 PF00486 Transcriptional regulatory protein, C terminal RZ95_02880 PF00072 Response regulator receiver domain RZ95_02885 PF00324 Amino acid permease RZ95_02890 PF04237 YjbR RZ95_02895 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RZ95_02915 PF01923 Cobalamin adenosyltransferase RZ95_02920 PF07715 TonB-dependent Receptor Plug Domain RZ95_02920 PF00593 TonB dependent receptor RZ95_02925 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RZ95_02930 PF00291 Pyridoxal-phosphate dependent enzyme RZ95_02950 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RZ95_02950 PF12833 Helix-turn-helix domain RZ95_02960 PF00290 Tryptophan synthase alpha chain RZ95_02965 PF01039 Carboxyl transferase domain RZ95_02970 PF08245 Mur ligase middle domain RZ95_02970 PF02875 Mur ligase family, glutamate ligase domain RZ95_02985 PF00753 Metallo-beta-lactamase superfamily RZ95_02990 PF10417 C-terminal domain of 1-Cys peroxiredoxin RZ95_02990 PF00578 AhpC/TSA family RZ95_03000 PF07517 SecA DEAD-like domain RZ95_03000 PF07516 SecA Wing and Scaffold domain RZ95_03000 PF02810 SEC-C motif RZ95_03000 PF01043 SecA preprotein cross-linking domain RZ95_03010 PF01960 ArgJ family RZ95_03015 PF02445 Quinolinate synthetase A protein RZ95_03045 PF17152 Periplasmic sensor domain RZ95_03045 PF00990 Diguanylate cyclase, GGDEF domain RZ95_03050 PF13689 YfiR/HmsC-like RZ95_03100 PF13817 IS66 C-terminal element RZ95_03100 PF13007 Transposase C of IS166 homeodomain RZ95_03100 PF13005 zinc-finger binding domain of transposase IS66 RZ95_03100 PF03050 Transposase IS66 family RZ95_03120 PF04386 Stringent starvation protein B RZ95_03125 PF02798 Glutathione S-transferase, N-terminal domain RZ95_03125 PF00043 Glutathione S-transferase, C-terminal domain RZ95_03135 PF00380 Ribosomal protein S9/S16 RZ95_03140 PF00572 Ribosomal protein L13 RZ95_03145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RZ95_03150 PF00398 Ribosomal RNA adenine dimethylase RZ95_03155 PF00149 Calcineurin-like phosphoesterase RZ95_03180 PF01926 50S ribosome-binding GTPase RZ95_03180 PF13167 GTP-binding GTPase N-terminal RZ95_03180 PF16360 GTP-binding GTPase Middle Region RZ95_03190 PF13091 PLD-like domain RZ95_03195 PF00149 Calcineurin-like phosphoesterase RZ95_03195 PF10518 TAT (twin-arginine translocation) pathway signal sequence RZ95_03205 PF00083 Sugar (and other) transporter RZ95_03205 PF07690 Major Facilitator Superfamily RZ95_03210 PF03006 Haemolysin-III related RZ95_03220 PF13673 Acetyltransferase (GNAT) domain RZ95_03230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RZ95_03230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RZ95_03230 PF00378 Enoyl-CoA hydratase/isomerase RZ95_03235 PF00108 Thiolase, N-terminal domain RZ95_03235 PF02803 Thiolase, C-terminal domain RZ95_03240 PF12833 Helix-turn-helix domain RZ95_03240 PF02311 AraC-like ligand binding domain RZ95_03245 PF02515 CoA-transferase family III RZ95_03250 PF04966 Carbohydrate-selective porin, OprB family RZ95_03255 PF01011 PQQ enzyme repeat RZ95_03260 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RZ95_03260 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RZ95_03270 PF00893 Small Multidrug Resistance protein RZ95_03280 PF00108 Thiolase, N-terminal domain RZ95_03280 PF02803 Thiolase, C-terminal domain RZ95_03290 PF00691 OmpA family RZ95_03290 PF13505 Outer membrane protein beta-barrel domain RZ95_03295 PF00324 Amino acid permease RZ95_03300 PF05175 Methyltransferase small domain RZ95_03300 PF08468 Methyltransferase small domain N-terminal RZ95_03305 PF00860 Permease family RZ95_03315 PF01741 Large-conductance mechanosensitive channel, MscL RZ95_03325 PF09312 SurA N-terminal domain RZ95_03325 PF00639 PPIC-type PPIASE domain RZ95_03330 PF06827 Zinc finger found in FPG and IleRS RZ95_03330 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RZ95_03330 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RZ95_03335 PF04966 Carbohydrate-selective porin, OprB family RZ95_03340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RZ95_03370 PF00330 Aconitase family (aconitate hydratase) RZ95_03370 PF00694 Aconitase C-terminal domain RZ95_03385 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RZ95_03390 PF01850 PIN domain RZ95_03420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RZ95_03425 PF00849 RNA pseudouridylate synthase RZ95_03445 PF04343 Protein of unknown function, DUF488 RZ95_03450 PF03831 PhnA domain RZ95_03450 PF08274 PhnA Zinc-Ribbon RZ95_03460 PF07411 Domain of unknown function (DUF1508) RZ95_03480 PF01207 Dihydrouridine synthase (Dus) RZ95_03500 PF02978 Signal peptide binding domain RZ95_03500 PF00448 SRP54-type protein, GTPase domain RZ95_03500 PF02881 SRP54-type protein, helical bundle domain RZ95_03510 PF03309 Type III pantothenate kinase RZ95_03520 PF01925 Sulfite exporter TauE/SafE RZ95_03530 PF02463 RecF/RecN/SMC N terminal domain RZ95_03530 PF06470 SMC proteins Flexible Hinge Domain RZ95_03535 PF04354 ZipA, C-terminal FtsZ-binding domain RZ95_03540 PF12826 Helix-hairpin-helix motif RZ95_03540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RZ95_03540 PF03120 NAD-dependent DNA ligase OB-fold domain RZ95_03540 PF01653 NAD-dependent DNA ligase adenylation domain RZ95_03540 PF00533 BRCA1 C Terminus (BRCT) domain RZ95_03545 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family RZ95_03550 PF00593 TonB dependent receptor RZ95_03550 PF07715 TonB-dependent Receptor Plug Domain RZ95_03570 PF00210 Ferritin-like domain RZ95_03575 PF00578 AhpC/TSA family RZ95_03580 PF00561 alpha/beta hydrolase fold RZ95_03585 PF06968 Biotin and Thiamin Synthesis associated domain RZ95_03585 PF00202 Aminotransferase class-III RZ95_03585 PF04055 Radical SAM superfamily RZ95_03590 PF00155 Aminotransferase class I and II RZ95_03605 PF02472 Biopolymer transport protein ExbD/TolR RZ95_03610 PF02472 Biopolymer transport protein ExbD/TolR RZ95_03615 PF01618 MotA/TolQ/ExbB proton channel family RZ95_03625 PF07715 TonB-dependent Receptor Plug Domain RZ95_03625 PF00593 TonB dependent receptor RZ95_03645 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_03650 PF12911 N-terminal TM domain of oligopeptide transport permease C RZ95_03650 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_03655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RZ95_03655 PF00005 ABC transporter RZ95_03665 PF04079 Segregation and condensation complex subunit ScpB RZ95_03670 PF02616 Segregation and condensation protein ScpA RZ95_03680 PF01300 Telomere recombination RZ95_03685 PF04315 Elongation factor P hydroxylase RZ95_03690 PF02620 Large ribosomal RNA subunit accumulation protein YceD RZ95_03695 PF01783 Ribosomal L32p protein family RZ95_03700 PF00698 Acyl transferase domain RZ95_03710 PF00550 Phosphopantetheine attachment site RZ95_03715 PF04972 BON domain RZ95_03715 PF01476 LysM domain RZ95_03720 PF07729 FCD domain RZ95_03720 PF00392 Bacterial regulatory proteins, gntR family RZ95_03725 PF02785 Biotin carboxylase C-terminal domain RZ95_03725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RZ95_03725 PF00289 Biotin carboxylase, N-terminal domain RZ95_03730 PF01425 Amidase RZ95_03735 PF04717 Type VI secretion system, phage-baseplate injector RZ95_03755 PF00268 Ribonucleotide reductase, small chain RZ95_03760 PF03477 ATP cone domain RZ95_03760 PF00317 Ribonucleotide reductase, all-alpha domain RZ95_03760 PF02867 Ribonucleotide reductase, barrel domain RZ95_03765 PF00486 Transcriptional regulatory protein, C terminal RZ95_03765 PF00072 Response regulator receiver domain RZ95_03770 PF00672 HAMP domain RZ95_03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_03770 PF00512 His Kinase A (phospho-acceptor) domain RZ95_03780 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RZ95_03785 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RZ95_03790 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RZ95_03790 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RZ95_03800 PF10531 SLBB domain RZ95_03800 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RZ95_03800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RZ95_03805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RZ95_03805 PF00384 Molybdopterin oxidoreductase RZ95_03805 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RZ95_03810 PF00146 NADH dehydrogenase RZ95_03815 PF12838 4Fe-4S dicluster domain RZ95_03820 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RZ95_03825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RZ95_03830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RZ95_03830 PF00361 Proton-conducting membrane transporter RZ95_03835 PF00361 Proton-conducting membrane transporter RZ95_03840 PF00361 Proton-conducting membrane transporter RZ95_03850 PF00313 'Cold-shock' DNA-binding domain RZ95_03855 PF00313 'Cold-shock' DNA-binding domain RZ95_03860 PF03466 LysR substrate binding domain RZ95_03860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_03865 PF00970 Oxidoreductase FAD-binding domain RZ95_03865 PF00175 Oxidoreductase NAD-binding domain RZ95_03870 PF00990 Diguanylate cyclase, GGDEF domain RZ95_03870 PF00072 Response regulator receiver domain RZ95_03895 PF08264 Anticodon-binding domain of tRNA RZ95_03895 PF00133 tRNA synthetases class I (I, L, M and V) RZ95_03895 PF10458 Valyl tRNA synthetase tRNA binding arm RZ95_03925 PF03050 Transposase IS66 family RZ95_03925 PF13007 Transposase C of IS166 homeodomain RZ95_03925 PF13005 zinc-finger binding domain of transposase IS66 RZ95_03925 PF13817 IS66 C-terminal element RZ95_03930 PF13007 Transposase C of IS166 homeodomain RZ95_03930 PF13005 zinc-finger binding domain of transposase IS66 RZ95_03930 PF03050 Transposase IS66 family RZ95_03930 PF13817 IS66 C-terminal element RZ95_03935 PF01906 Putative heavy-metal-binding RZ95_03940 PF01906 Putative heavy-metal-binding RZ95_03945 PF02321 Outer membrane efflux protein RZ95_03950 PF00873 AcrB/AcrD/AcrF family RZ95_03955 PF00529 HlyD membrane-fusion protein of T1SS RZ95_03955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RZ95_03960 PF01569 PAP2 superfamily RZ95_03970 PF00348 Polyprenyl synthetase RZ95_03975 PF00829 Ribosomal prokaryotic L21 protein RZ95_03980 PF01016 Ribosomal L27 protein RZ95_03995 PF03548 Outer membrane lipoprotein carrier protein LolA RZ95_04005 PF02403 Seryl-tRNA synthetase N-terminal domain RZ95_04005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RZ95_04010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RZ95_04010 PF10414 Sirohaem synthase dimerisation region RZ95_04010 PF14824 Sirohaem biosynthesis protein central RZ95_04015 PF00588 SpoU rRNA Methylase family RZ95_04030 PF03358 NADPH-dependent FMN reductase RZ95_04035 PF13520 Amino acid permease RZ95_04040 PF00465 Iron-containing alcohol dehydrogenase RZ95_04050 PF03099 Biotin/lipoate A/B protein ligase family RZ95_04055 PF04359 Protein of unknown function (DUF493) RZ95_04060 PF04546 Sigma-70, non-essential region RZ95_04060 PF04539 Sigma-70 region 3 RZ95_04060 PF04545 Sigma-70, region 4 RZ95_04060 PF04542 Sigma-70 region 2 RZ95_04060 PF00140 Sigma-70 factor, region 1.2 RZ95_04060 PF03979 Sigma-70 factor, region 1.1 RZ95_04075 PF01810 LysE type translocator RZ95_04090 PF09335 SNARE associated Golgi protein RZ95_04110 PF01810 LysE type translocator RZ95_04115 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RZ95_04130 PF02261 Aspartate decarboxylase RZ95_04135 PF01195 Peptidyl-tRNA hydrolase RZ95_04140 PF01386 Ribosomal L25p family RZ95_04145 PF14572 Phosphoribosyl synthetase-associated domain RZ95_04145 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RZ95_04170 PF08544 GHMP kinases C terminal RZ95_04170 PF00288 GHMP kinases N terminal domain RZ95_04175 PF03550 Outer membrane lipoprotein LolB RZ95_04185 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RZ95_04185 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RZ95_04185 PF01488 Shikimate / quinate 5-dehydrogenase RZ95_04190 PF08278 DNA primase DnaG DnaB-binding RZ95_04190 PF10410 DnaB-helicase binding domain of primase RZ95_04190 PF01807 CHC2 zinc finger RZ95_04190 PF08275 DNA primase catalytic core, N-terminal domain RZ95_04195 PF13525 Outer membrane lipoprotein RZ95_04200 PF00849 RNA pseudouridylate synthase RZ95_04200 PF01479 S4 domain RZ95_04210 PF03358 NADPH-dependent FMN reductase RZ95_04215 PF01668 SmpB protein RZ95_04220 PF01467 Cytidylyltransferase-like RZ95_04225 PF00037 4Fe-4S binding domain RZ95_04240 PF02540 NAD synthase RZ95_04240 PF00795 Carbon-nitrogen hydrolase RZ95_04255 PF00106 short chain dehydrogenase RZ95_04260 PF00743 Flavin-binding monooxygenase-like RZ95_04265 PF00285 Citrate synthase, C-terminal domain RZ95_04270 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RZ95_04275 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RZ95_04280 PF02910 Fumarate reductase flavoprotein C-term RZ95_04280 PF00890 FAD binding domain RZ95_04285 PF13085 2Fe-2S iron-sulfur cluster binding domain RZ95_04290 PF00676 Dehydrogenase E1 component RZ95_04290 PF16078 2-oxoglutarate dehydrogenase N-terminus RZ95_04290 PF16870 2-oxoglutarate dehydrogenase C-terminal RZ95_04290 PF02779 Transketolase, pyrimidine binding domain RZ95_04295 PF00364 Biotin-requiring enzyme RZ95_04295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RZ95_04295 PF02817 e3 binding domain RZ95_04300 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_04300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RZ95_04305 PF00549 CoA-ligase RZ95_04305 PF08442 ATP-grasp domain RZ95_04310 PF02629 CoA binding domain RZ95_04310 PF00549 CoA-ligase RZ95_04320 PF15975 Flotillin RZ95_04320 PF01145 SPFH domain / Band 7 family RZ95_04325 PF07290 Protein of unknown function (DUF1449) RZ95_04330 PF00579 tRNA synthetases class I (W and Y) RZ95_04335 PF05661 Protein of unknown function (DUF808) RZ95_04340 PF04228 Putative neutral zinc metallopeptidase RZ95_04350 PF00999 Sodium/hydrogen exchanger family RZ95_04355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RZ95_04370 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_04375 PF03449 Transcription elongation factor, N-terminal RZ95_04375 PF01272 Transcription elongation factor, GreA/GreB, C-term RZ95_04380 PF02142 MGS-like domain RZ95_04380 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RZ95_04380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RZ95_04385 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RZ95_04385 PF00117 Glutamine amidotransferase class-I RZ95_04400 PF01985 CRS1 / YhbY (CRM) domain RZ95_04405 PF01728 FtsJ-like methyltransferase RZ95_04410 PF17862 AAA+ lid domain RZ95_04410 PF01434 Peptidase family M41 RZ95_04410 PF06480 FtsH Extracellular RZ95_04410 PF00004 ATPase family associated with various cellular activities (AAA) RZ95_04415 PF00809 Pterin binding enzyme RZ95_04435 PF16655 PhoD-like phosphatase, N-terminal domain RZ95_04435 PF09423 PhoD-like phosphatase RZ95_04455 PF03600 Citrate transporter RZ95_04460 PF01595 Cyclin M transmembrane N-terminal domain RZ95_04460 PF03471 Transporter associated domain RZ95_04460 PF00571 CBS domain RZ95_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_04465 PF03466 LysR substrate binding domain RZ95_04470 PF00463 Isocitrate lyase family RZ95_04475 PF01219 Prokaryotic diacylglycerol kinase RZ95_04485 PF00873 AcrB/AcrD/AcrF family RZ95_04490 PF03448 MgtE intracellular N domain RZ95_04490 PF01769 Divalent cation transporter RZ95_04490 PF00571 CBS domain RZ95_04505 PF01435 Peptidase family M48 RZ95_04510 PF01464 Transglycosylase SLT domain RZ95_04515 PF01171 PP-loop family RZ95_04525 PF00497 Bacterial extracellular solute-binding proteins, family 3 RZ95_04525 PF01464 Transglycosylase SLT domain RZ95_04530 PF03449 Transcription elongation factor, N-terminal RZ95_04530 PF01272 Transcription elongation factor, GreA/GreB, C-term RZ95_04550 PF00892 EamA-like transporter family RZ95_04560 PF00440 Bacterial regulatory proteins, tetR family RZ95_04560 PF16925 Tetracyclin repressor-like, C-terminal domain RZ95_04565 PF00698 Acyl transferase domain RZ95_04565 PF00550 Phosphopantetheine attachment site RZ95_04565 PF14765 Polyketide synthase dehydratase RZ95_04565 PF08659 KR domain RZ95_04565 PF02801 Beta-ketoacyl synthase, C-terminal domain RZ95_04565 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_04565 PF00109 Beta-ketoacyl synthase, N-terminal domain RZ95_04565 PF16197 Ketoacyl-synthetase C-terminal extension RZ95_04565 PF00107 Zinc-binding dehydrogenase RZ95_04575 PF02678 Pirin RZ95_04575 PF17954 Quercetinase C-terminal cupin domain RZ95_04590 PF01208 Uroporphyrinogen decarboxylase (URO-D) RZ95_04595 PF05675 Protein of unknown function (DUF817) RZ95_04610 PF00990 Diguanylate cyclase, GGDEF domain RZ95_04620 PF01227 GTP cyclohydrolase I RZ95_04630 PF00218 Indole-3-glycerol phosphate synthase RZ95_04635 PF00591 Glycosyl transferase family, a/b domain RZ95_04635 PF02885 Glycosyl transferase family, helical bundle domain RZ95_04640 PF00117 Glutamine amidotransferase class-I RZ95_04655 PF04345 Chorismate lyase RZ95_04660 PF01040 UbiA prenyltransferase family RZ95_04700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RZ95_04700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RZ95_04705 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RZ95_04705 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RZ95_04710 PF01784 NIF3 (NGG1p interacting factor 3) RZ95_04715 PF13180 PDZ domain RZ95_04715 PF17820 PDZ domain RZ95_04725 PF18073 Rubredoxin metal binding domain RZ95_04730 PF01235 Sodium:alanine symporter family RZ95_04735 PF00324 Amino acid permease RZ95_04745 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RZ95_04745 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RZ95_04750 PF01678 Diaminopimelate epimerase RZ95_04755 PF02899 Phage integrase, N-terminal SAM-like domain RZ95_04755 PF00589 Phage integrase family RZ95_04765 PF13302 Acetyltransferase (GNAT) domain RZ95_04770 PF01037 Lrp/AsnC ligand binding domain RZ95_04775 PF01810 LysE type translocator RZ95_04780 PF01012 Electron transfer flavoprotein domain RZ95_04785 PF01012 Electron transfer flavoprotein domain RZ95_04785 PF00766 Electron transfer flavoprotein FAD-binding domain RZ95_04795 PF03989 DNA gyrase C-terminal domain, beta-propeller RZ95_04795 PF00521 DNA gyrase/topoisomerase IV, subunit A RZ95_04815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RZ95_04825 PF00266 Aminotransferase class-V RZ95_04830 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RZ95_04850 PF00557 Metallopeptidase family M24 RZ95_04855 PF00318 Ribosomal protein S2 RZ95_04860 PF00889 Elongation factor TS RZ95_04880 PF13005 zinc-finger binding domain of transposase IS66 RZ95_04880 PF13007 Transposase C of IS166 homeodomain RZ95_04880 PF03050 Transposase IS66 family RZ95_04880 PF13817 IS66 C-terminal element RZ95_04910 PF03050 Transposase IS66 family RZ95_04910 PF13817 IS66 C-terminal element RZ95_04910 PF13007 Transposase C of IS166 homeodomain RZ95_04910 PF13005 zinc-finger binding domain of transposase IS66 RZ95_04915 PF03330 Lytic transglycolase RZ95_04915 PF05036 Sporulation related domain RZ95_04920 PF13406 Transglycosylase SLT domain RZ95_04935 PF14489 QueF-like protein RZ95_04935 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RZ95_04940 PF01061 ABC-2 type transporter RZ95_04945 PF00005 ABC transporter RZ95_04955 PF03453 MoeA N-terminal region (domain I and II) RZ95_04955 PF03454 MoeA C-terminal region (domain IV) RZ95_04955 PF00994 Probable molybdopterin binding domain RZ95_04960 PF01967 MoaC family RZ95_04960 PF00994 Probable molybdopterin binding domain RZ95_04965 PF06463 Molybdenum Cofactor Synthesis C RZ95_04965 PF04055 Radical SAM superfamily RZ95_04970 PF00384 Molybdopterin oxidoreductase RZ95_04975 PF02634 FdhD/NarQ family RZ95_04980 PF03459 TOBE domain RZ95_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_04990 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_04995 PF00005 ABC transporter RZ95_04995 PF03459 TOBE domain RZ95_05000 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RZ95_05000 PF12833 Helix-turn-helix domain RZ95_05020 PF12833 Helix-turn-helix domain RZ95_05025 PF00596 Class II Aldolase and Adducin N-terminal domain RZ95_05030 PF00155 Aminotransferase class I and II RZ95_05035 PF00892 EamA-like transporter family RZ95_05040 PF00999 Sodium/hydrogen exchanger family RZ95_05040 PF02254 TrkA-N domain RZ95_05045 PF00990 Diguanylate cyclase, GGDEF domain RZ95_05045 PF17158 Membrane-associated sensor, integral membrane domain RZ95_05080 PF00464 Serine hydroxymethyltransferase RZ95_05085 PF01272 Transcription elongation factor, GreA/GreB, C-term RZ95_05085 PF14760 Rnk N-terminus RZ95_05095 PF05816 Toxic anion resistance protein (TelA) RZ95_05105 PF13192 Thioredoxin domain RZ95_05105 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_05110 PF00037 4Fe-4S binding domain RZ95_05120 PF13411 MerR HTH family regulatory protein RZ95_05130 PF04717 Type VI secretion system, phage-baseplate injector RZ95_05165 PF00970 Oxidoreductase FAD-binding domain RZ95_05165 PF00175 Oxidoreductase NAD-binding domain RZ95_05170 PF18389 TrmO C-terminal domain RZ95_05170 PF01980 tRNA-methyltransferase O RZ95_05180 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RZ95_05180 PF00437 Type II/IV secretion system protein RZ95_05195 PF00512 His Kinase A (phospho-acceptor) domain RZ95_05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_05195 PF08521 Two-component sensor kinase N-terminal RZ95_05200 PF00293 NUDIX domain RZ95_05210 PF14814 Bifunctional transglycosylase second domain RZ95_05210 PF00905 Penicillin binding protein transpeptidase domain RZ95_05210 PF00912 Transglycosylase RZ95_05215 PF01513 ATP-NAD kinase RZ95_05220 PF07023 Protein of unknown function (DUF1315) RZ95_05230 PF00591 Glycosyl transferase family, a/b domain RZ95_05230 PF02885 Glycosyl transferase family, helical bundle domain RZ95_05235 PF00375 Sodium:dicarboxylate symporter family RZ95_05245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_05245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_05245 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_05250 PF01965 DJ-1/PfpI family RZ95_05255 PF00800 Prephenate dehydratase RZ95_05255 PF01817 Chorismate mutase type II RZ95_05255 PF01842 ACT domain RZ95_05260 PF00155 Aminotransferase class I and II RZ95_05265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RZ95_05285 PF03883 Peroxide stress protein YaaA RZ95_05295 PF00875 DNA photolyase RZ95_05295 PF03441 FAD binding domain of DNA photolyase RZ95_05305 PF00860 Permease family RZ95_05310 PF00962 Adenosine/AMP deaminase RZ95_05320 PF01292 Prokaryotic cytochrome b561 RZ95_05335 PF01351 Ribonuclease HII RZ95_05340 PF02599 Global regulator protein family RZ95_05345 PF13840 ACT domain RZ95_05345 PF01842 ACT domain RZ95_05345 PF00696 Amino acid kinase family RZ95_05350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RZ95_05350 PF01411 tRNA synthetases class II (A) RZ95_05350 PF02272 DHHA1 domain RZ95_05355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RZ95_05355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RZ95_05370 PF03591 AzlC protein RZ95_05375 PF01037 Lrp/AsnC ligand binding domain RZ95_05375 PF13404 AsnC-type helix-turn-helix domain RZ95_05395 PF13393 Histidyl-tRNA synthetase RZ95_05400 PF00709 Adenylosuccinate synthetase RZ95_05415 PF00248 Aldo/keto reductase family RZ95_05420 PF00027 Cyclic nucleotide-binding domain RZ95_05420 PF13545 Crp-like helix-turn-helix domain RZ95_05425 PF02566 OsmC-like protein RZ95_05430 PF10431 C-terminal, D2-small domain, of ClpB protein RZ95_05430 PF02861 Clp amino terminal domain, pathogenicity island component RZ95_05430 PF17871 AAA lid domain RZ95_05430 PF07724 AAA domain (Cdc48 subfamily) RZ95_05430 PF00004 ATPase family associated with various cellular activities (AAA) RZ95_05440 PF01170 Putative RNA methylase family UPF0020 RZ95_05440 PF02926 THUMP domain RZ95_05440 PF10672 S-adenosylmethionine-dependent methyltransferase RZ95_05450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RZ95_05450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RZ95_05455 PF01979 Amidohydrolase family RZ95_05470 PF02667 Short chain fatty acid transporter RZ95_05475 PF01144 Coenzyme A transferase RZ95_05480 PF01144 Coenzyme A transferase RZ95_05485 PF00682 HMGL-like RZ95_05490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RZ95_05490 PF00364 Biotin-requiring enzyme RZ95_05490 PF00289 Biotin carboxylase, N-terminal domain RZ95_05490 PF02785 Biotin carboxylase C-terminal domain RZ95_05495 PF00378 Enoyl-CoA hydratase/isomerase RZ95_05500 PF01039 Carboxyl transferase domain RZ95_05505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_05505 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_05505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_05510 PF00440 Bacterial regulatory proteins, tetR family RZ95_05510 PF17925 Tetracyclin repressor-like, C-terminal domain RZ95_05515 PF00501 AMP-binding enzyme RZ95_05515 PF13193 AMP-binding enzyme C-terminal domain RZ95_05520 PF04055 Radical SAM superfamily RZ95_05520 PF06968 Biotin and Thiamin Synthesis associated domain RZ95_05545 PF02390 Putative methyltransferase RZ95_05555 PF00916 Sulfate permease family RZ95_05555 PF01740 STAS domain RZ95_05560 PF02798 Glutathione S-transferase, N-terminal domain RZ95_05560 PF00043 Glutathione S-transferase, C-terminal domain RZ95_05565 PF02525 Flavodoxin-like fold RZ95_05580 PF05690 Thiazole biosynthesis protein ThiG RZ95_05590 PF04241 Protein of unknown function (DUF423) RZ95_05595 PF00140 Sigma-70 factor, region 1.2 RZ95_05595 PF04542 Sigma-70 region 2 RZ95_05595 PF04545 Sigma-70, region 4 RZ95_05605 PF00313 'Cold-shock' DNA-binding domain RZ95_05610 PF00270 DEAD/DEAH box helicase RZ95_05610 PF00271 Helicase conserved C-terminal domain RZ95_05620 PF00881 Nitroreductase family RZ95_05625 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RZ95_05625 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RZ95_05645 PF01180 Dihydroorotate dehydrogenase RZ95_05655 PF00156 Phosphoribosyl transferase domain RZ95_05670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RZ95_05670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RZ95_05675 PF01435 Peptidase family M48 RZ95_05680 PF09424 Yqey-like protein RZ95_05685 PF01165 Ribosomal protein S21 RZ95_05690 PF00814 Glycoprotease family RZ95_05710 PF03793 PASTA domain RZ95_05710 PF00069 Protein kinase domain RZ95_05735 PF00753 Metallo-beta-lactamase superfamily RZ95_05735 PF16123 Hydroxyacylglutathione hydrolase C-terminus RZ95_05740 PF00578 AhpC/TSA family RZ95_05740 PF10417 C-terminal domain of 1-Cys peroxiredoxin RZ95_05745 PF04408 Helicase associated domain (HA2) RZ95_05745 PF00270 DEAD/DEAH box helicase RZ95_05745 PF00271 Helicase conserved C-terminal domain RZ95_05745 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RZ95_05745 PF11898 Domain of unknown function (DUF3418) RZ95_05750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RZ95_05750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RZ95_05765 PF00005 ABC transporter RZ95_05775 PF07690 Major Facilitator Superfamily RZ95_05780 PF18267 Rubredoxin NAD+ reductase C-terminal domain RZ95_05780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RZ95_05780 PF04324 BFD-like [2Fe-2S] binding domain RZ95_05780 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_05780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RZ95_05785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RZ95_05785 PF04324 BFD-like [2Fe-2S] binding domain RZ95_05785 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_05785 PF18267 Rubredoxin NAD+ reductase C-terminal domain RZ95_05785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RZ95_05790 PF04324 BFD-like [2Fe-2S] binding domain RZ95_05790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RZ95_05790 PF00384 Molybdopterin oxidoreductase RZ95_05790 PF01568 Molydopterin dinucleotide binding domain RZ95_05795 PF12804 MobA-like NTP transferase domain RZ95_05800 PF06463 Molybdenum Cofactor Synthesis C RZ95_05800 PF04055 Radical SAM superfamily RZ95_05810 PF02391 MoaE protein RZ95_05815 PF01406 tRNA synthetases class I (C) catalytic domain RZ95_05815 PF09190 DALR domain RZ95_05830 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RZ95_05835 PF02277 Phosphoribosyltransferase RZ95_05840 PF00300 Histidine phosphatase superfamily (branch 1) RZ95_05845 PF02654 Cobalamin-5-phosphate synthase RZ95_05850 PF00571 CBS domain RZ95_05850 PF01380 SIS domain RZ95_05865 PF03968 OstA-like protein RZ95_05870 PF12399 Branched-chain amino acid ATP-binding cassette transporter RZ95_05870 PF00005 ABC transporter RZ95_05875 PF01205 Uncharacterized protein family UPF0029 RZ95_05880 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_05880 PF14602 Hexapeptide repeat of succinyl-transferase RZ95_05880 PF12804 MobA-like NTP transferase domain RZ95_05890 PF01596 O-methyltransferase RZ95_05900 PF00037 4Fe-4S binding domain RZ95_05900 PF11953 Domain of unknown function (DUF3470) RZ95_05905 PF00488 MutS domain V RZ95_05905 PF05188 MutS domain II RZ95_05905 PF05192 MutS domain III RZ95_05905 PF01624 MutS domain I RZ95_05905 PF05190 MutS family domain IV RZ95_05920 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_05925 PF00588 SpoU rRNA Methylase family RZ95_05930 PF02811 PHP domain RZ95_05930 PF01336 OB-fold nucleic acid binding domain RZ95_05930 PF07733 Bacterial DNA polymerase III alpha NTPase domain RZ95_05930 PF14579 Helix-hairpin-helix motif RZ95_05930 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RZ95_05940 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_05945 PF00005 ABC transporter RZ95_05945 PF09383 NIL domain RZ95_05950 PF03180 NLPA lipoprotein RZ95_05955 PF02843 Phosphoribosylglycinamide synthetase, C domain RZ95_05955 PF02844 Phosphoribosylglycinamide synthetase, N domain RZ95_05955 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RZ95_05960 PF02142 MGS-like domain RZ95_05960 PF01808 AICARFT/IMPCHase bienzyme RZ95_05965 PF02954 Bacterial regulatory protein, Fis family RZ95_05995 PF13932 GidA associated domain RZ95_05995 PF01134 Glucose inhibited division protein A RZ95_06010 PF14403 Circularly permuted ATP-grasp type 2 RZ95_06020 PF08379 Bacterial transglutaminase-like N-terminal region RZ95_06020 PF01841 Transglutaminase-like superfamily RZ95_06035 PF01168 Alanine racemase, N-terminal domain RZ95_06035 PF00842 Alanine racemase, C-terminal domain RZ95_06040 PF03796 DnaB-like helicase C terminal domain RZ95_06040 PF00772 DnaB-like helicase N terminal domain RZ95_06045 PF03948 Ribosomal protein L9, C-terminal domain RZ95_06045 PF01281 Ribosomal protein L9, N-terminal domain RZ95_06050 PF01084 Ribosomal protein S18 RZ95_06055 PF01250 Ribosomal protein S6 RZ95_06070 PF01040 UbiA prenyltransferase family RZ95_06075 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RZ95_06080 PF00510 Cytochrome c oxidase subunit III RZ95_06085 PF00115 Cytochrome C and Quinol oxidase polypeptide I RZ95_06090 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RZ95_06090 PF06481 COX Aromatic Rich Motif RZ95_06100 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RZ95_06100 PF02896 PEP-utilising enzyme, TIM barrel domain RZ95_06100 PF00391 PEP-utilising enzyme, mobile domain RZ95_06105 PF03618 Kinase/pyrophosphorylase RZ95_06120 PF00296 Luciferase-like monooxygenase RZ95_06135 PF03462 PCRF domain RZ95_06135 PF00472 RF-1 domain RZ95_06140 PF17827 PrmC N-terminal domain RZ95_06140 PF13847 Methyltransferase domain RZ95_06145 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_06150 PF09084 NMT1/THI5 like RZ95_06170 PF12833 Helix-turn-helix domain RZ95_06170 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RZ95_06175 PF00106 short chain dehydrogenase RZ95_06180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_06180 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_06180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_06185 PF13193 AMP-binding enzyme C-terminal domain RZ95_06185 PF00501 AMP-binding enzyme RZ95_06190 PF00899 ThiF family RZ95_06195 PF03109 ABC1 family RZ95_06200 PF02152 Dihydroneopterin aldolase RZ95_06215 PF03232 Ubiquinone biosynthesis protein COQ7 RZ95_06220 PF07690 Major Facilitator Superfamily RZ95_06225 PF01103 Surface antigen RZ95_06225 PF07244 Surface antigen variable number repeat RZ95_06225 PF17243 POTRA domain TamA domain 1 RZ95_06255 PF11791 Aconitate B N-terminal domain RZ95_06255 PF00330 Aconitase family (aconitate hydratase) RZ95_06255 PF06434 Aconitate hydratase 2 N-terminus RZ95_06265 PF13737 Transposase DDE domain RZ95_06270 PF03616 Sodium/glutamate symporter RZ95_06275 PF01037 Lrp/AsnC ligand binding domain RZ95_06280 PF00324 Amino acid permease RZ95_06300 PF05525 Branched-chain amino acid transport protein RZ95_06305 PF00557 Metallopeptidase family M24 RZ95_06310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_06310 PF03466 LysR substrate binding domain RZ95_06315 PF13291 ACT domain RZ95_06315 PF02824 TGS domain RZ95_06315 PF04607 Region found in RelA / SpoT proteins RZ95_06325 PF00072 Response regulator receiver domain RZ95_06325 PF02954 Bacterial regulatory protein, Fis family RZ95_06325 PF00158 Sigma-54 interaction domain RZ95_06330 PF00989 PAS fold RZ95_06330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_06330 PF00512 His Kinase A (phospho-acceptor) domain RZ95_06335 PF04055 Radical SAM superfamily RZ95_06335 PF00919 Uncharacterized protein family UPF0004 RZ95_06335 PF18693 TRAM domain RZ95_06340 PF00696 Amino acid kinase family RZ95_06345 PF01765 Ribosome recycling factor RZ95_06350 PF01255 Putative undecaprenyl diphosphate synthase RZ95_06360 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RZ95_06360 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RZ95_06360 PF13288 DXP reductoisomerase C-terminal domain RZ95_06365 PF13180 PDZ domain RZ95_06365 PF02163 Peptidase family M50 RZ95_06365 PF17820 PDZ domain RZ95_06370 PF07244 Surface antigen variable number repeat RZ95_06370 PF01103 Surface antigen RZ95_06380 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RZ95_06380 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_06385 PF07977 FabA-like domain RZ95_06390 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RZ95_06390 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_06400 PF02631 RecX family RZ95_06405 PF00154 recA bacterial DNA recombination protein RZ95_06410 PF01479 S4 domain RZ95_06415 PF13419 Haloacid dehalogenase-like hydrolase RZ95_06445 PF06630 Enterobacterial exodeoxyribonuclease VIII RZ95_06445 PF12684 PDDEXK-like domain of unknown function (DUF3799) RZ95_06605 PF01757 Acyltransferase family RZ95_06645 PF00459 Inositol monophosphatase family RZ95_06660 PF00041 Fibronectin type III domain RZ95_06660 PF12561 ToxR activated gene A lipoprotein domain RZ95_06665 PF01649 Ribosomal protein S20 RZ95_06670 PF13460 NAD(P)H-binding RZ95_06675 PF03737 Aldolase/RraA RZ95_06695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RZ95_06695 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_06710 PF07690 Major Facilitator Superfamily RZ95_06730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_06730 PF03466 LysR substrate binding domain RZ95_06740 PF06418 CTP synthase N-terminus RZ95_06740 PF00117 Glutamine amidotransferase class-I RZ95_06745 PF00793 DAHP synthetase I family RZ95_06750 PF03952 Enolase, N-terminal domain RZ95_06750 PF00113 Enolase, C-terminal TIM barrel domain RZ95_06755 PF04977 Septum formation initiator RZ95_06760 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RZ95_06765 PF01098 Cell cycle protein RZ95_06780 PF06039 Malate:quinone oxidoreductase (Mqo) RZ95_06785 PF05199 GMC oxidoreductase RZ95_06785 PF00732 GMC oxidoreductase RZ95_06790 PF00171 Aldehyde dehydrogenase family RZ95_06795 PF13977 BetI-type transcriptional repressor, C-terminal RZ95_06795 PF00440 Bacterial regulatory proteins, tetR family RZ95_06800 PF02028 BCCT, betaine/carnitine/choline family transporter RZ95_06815 PF08173 Membrane bound YbgT-like protein RZ95_06820 PF02322 Cytochrome bd terminal oxidase subunit II RZ95_06825 PF01654 Cytochrome bd terminal oxidase subunit I RZ95_06835 PF07290 Protein of unknown function (DUF1449) RZ95_06845 PF00294 pfkB family carbohydrate kinase RZ95_06855 PF00675 Insulinase (Peptidase family M16) RZ95_06855 PF08367 Peptidase M16C associated RZ95_06855 PF05193 Peptidase M16 inactive domain RZ95_06860 PF02253 Phospholipase A1 RZ95_06865 PF02386 Cation transport protein RZ95_06870 PF02080 TrkA-C domain RZ95_06870 PF02254 TrkA-N domain RZ95_06880 PF00291 Pyridoxal-phosphate dependent enzyme RZ95_06880 PF00585 C-terminal regulatory domain of Threonine dehydratase RZ95_06885 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RZ95_06910 PF01118 Semialdehyde dehydrogenase, NAD binding domain RZ95_06910 PF02774 Semialdehyde dehydrogenase, dimerisation domain RZ95_06920 PF02617 ATP-dependent Clp protease adaptor protein ClpS RZ95_06925 PF10431 C-terminal, D2-small domain, of ClpB protein RZ95_06925 PF17871 AAA lid domain RZ95_06925 PF02861 Clp amino terminal domain, pathogenicity island component RZ95_06925 PF07724 AAA domain (Cdc48 subfamily) RZ95_06925 PF00004 ATPase family associated with various cellular activities (AAA) RZ95_06930 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RZ95_06940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RZ95_06940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RZ95_06945 PF00440 Bacterial regulatory proteins, tetR family RZ95_06955 PF00285 Citrate synthase, C-terminal domain RZ95_06965 PF00756 Putative esterase RZ95_06970 PF00501 AMP-binding enzyme RZ95_06970 PF13193 AMP-binding enzyme C-terminal domain RZ95_06985 PF06968 Biotin and Thiamin Synthesis associated domain RZ95_06985 PF04055 Radical SAM superfamily RZ95_06990 PF08331 Domain of unknown function (DUF1730) RZ95_06995 PF01256 Carbohydrate kinase RZ95_06995 PF03853 YjeF-related protein N-terminus RZ95_07000 PF00708 Acylphosphatase RZ95_07005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RZ95_07010 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_07015 PF07943 Penicillin-binding protein 5, C-terminal domain RZ95_07015 PF00768 D-alanyl-D-alanine carboxypeptidase RZ95_07025 PF00576 HIUase/Transthyretin family RZ95_07030 PF03971 Monomeric isocitrate dehydrogenase RZ95_07040 PF00849 RNA pseudouridylate synthase RZ95_07075 PF00857 Isochorismatase family RZ95_07090 PF13438 Domain of unknown function (DUF4113) RZ95_07090 PF11799 impB/mucB/samB family C-terminal domain RZ95_07090 PF00817 impB/mucB/samB family RZ95_07095 PF00717 Peptidase S24-like RZ95_07095 PF01726 LexA DNA binding domain RZ95_07105 PF00199 Catalase RZ95_07105 PF06628 Catalase-related immune-responsive RZ95_07105 PF18011 C-terminal domain found in long catalases RZ95_07110 PF04239 Protein of unknown function (DUF421) RZ95_07150 PF07690 Major Facilitator Superfamily RZ95_07155 PF00982 Glycosyltransferase family 20 RZ95_07160 PF02358 Trehalose-phosphatase RZ95_07170 PF13742 OB-fold nucleic acid binding domain RZ95_07170 PF02601 Exonuclease VII, large subunit RZ95_07205 PF00180 Isocitrate/isopropylmalate dehydrogenase RZ95_07220 PF01613 Flavin reductase like domain RZ95_07230 PF02567 Phenazine biosynthesis-like protein RZ95_07235 PF05193 Peptidase M16 inactive domain RZ95_07235 PF00675 Insulinase (Peptidase family M16) RZ95_07270 PF02581 Thiamine monophosphate synthase RZ95_07275 PF00202 Aminotransferase class-III RZ95_07305 PF02075 Crossover junction endodeoxyribonuclease RuvC RZ95_07315 PF01810 LysE type translocator RZ95_07335 PF02773 S-adenosylmethionine synthetase, C-terminal domain RZ95_07335 PF00438 S-adenosylmethionine synthetase, N-terminal domain RZ95_07335 PF02772 S-adenosylmethionine synthetase, central domain RZ95_07340 PF02780 Transketolase, C-terminal domain RZ95_07340 PF00456 Transketolase, thiamine diphosphate binding domain RZ95_07340 PF02779 Transketolase, pyrimidine binding domain RZ95_07355 PF00583 Acetyltransferase (GNAT) family RZ95_07360 PF04264 YceI-like domain RZ95_07365 PF02540 NAD synthase RZ95_07365 PF00958 GMP synthase C terminal domain RZ95_07365 PF00117 Glutamine amidotransferase class-I RZ95_07375 PF00106 short chain dehydrogenase RZ95_07380 PF01323 DSBA-like thioredoxin domain RZ95_07385 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RZ95_07390 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RZ95_07395 PF13520 Amino acid permease RZ95_07405 PF00171 Aldehyde dehydrogenase family RZ95_07420 PF00465 Iron-containing alcohol dehydrogenase RZ95_07430 PF05970 PIF1-like helicase RZ95_07430 PF14493 Helix-turn-helix domain RZ95_07435 PF00520 Ion transport protein RZ95_07435 PF00027 Cyclic nucleotide-binding domain RZ95_07440 PF07690 Major Facilitator Superfamily RZ95_07445 PF04284 Protein of unknown function (DUF441) RZ95_07450 PF00849 RNA pseudouridylate synthase RZ95_07450 PF01479 S4 domain RZ95_07465 PF00849 RNA pseudouridylate synthase RZ95_07470 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RZ95_07475 PF01119 DNA mismatch repair protein, C-terminal domain RZ95_07475 PF08676 MutL C terminal dimerisation domain RZ95_07485 PF17209 Hfq protein RZ95_07490 PF00639 PPIC-type PPIASE domain RZ95_07490 PF09312 SurA N-terminal domain RZ95_07495 PF03968 OstA-like protein RZ95_07495 PF04453 LPS transport system D RZ95_07500 PF01636 Phosphotransferase enzyme family RZ95_07505 PF00483 Nucleotidyl transferase RZ95_07510 PF02527 rRNA small subunit methyltransferase G RZ95_07515 PF13614 AAA domain RZ95_07520 PF17762 HTH domain found in ParB protein RZ95_07520 PF02195 ParB-like nuclease domain RZ95_07525 PF01618 MotA/TolQ/ExbB proton channel family RZ95_07535 PF00005 ABC transporter RZ95_07535 PF00664 ABC transporter transmembrane region RZ95_07540 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RZ95_07545 PF02348 Cytidylyltransferase RZ95_07550 PF09115 DNA polymerase III, delta subunit, C terminal RZ95_07560 PF01026 TatD related DNase RZ95_07575 PF02501 Type II secretion system (T2SS), protein I RZ95_07575 PF07963 Prokaryotic N-terminal methylation motif RZ95_07580 PF07963 Prokaryotic N-terminal methylation motif RZ95_07580 PF11612 Type II secretion system (T2SS), protein J RZ95_07585 PF03934 Type II secretion system (T2SS), protein K RZ95_07595 PF03167 Uracil DNA glycosylase superfamily RZ95_07605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RZ95_07615 PF02224 Cytidylate kinase RZ95_07620 PF00575 S1 RNA binding domain RZ95_07625 PF00216 Bacterial DNA-binding protein RZ95_07635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RZ95_07640 PF03956 Lysine exporter LysO RZ95_07645 PF00743 Flavin-binding monooxygenase-like RZ95_07655 PF03969 AFG1-like ATPase RZ95_07660 PF01274 Malate synthase RZ95_07680 PF03471 Transporter associated domain RZ95_07680 PF03741 Integral membrane protein TerC family RZ95_07690 PF02110 Hydroxyethylthiazole kinase family RZ95_07705 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RZ95_07705 PF11940 Domain of unknown function (DUF3458) Ig-like fold RZ95_07705 PF01433 Peptidase family M1 domain RZ95_07715 PF00582 Universal stress protein family RZ95_07725 PF00135 Carboxylesterase family RZ95_07730 PF00893 Small Multidrug Resistance protein RZ95_07735 PF00440 Bacterial regulatory proteins, tetR family RZ95_07740 PF03594 Benzoate membrane transport protein RZ95_07745 PF01810 LysE type translocator RZ95_07750 PF00923 Transaldolase/Fructose-6-phosphate aldolase RZ95_07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_07755 PF03466 LysR substrate binding domain RZ95_07770 PF02803 Thiolase, C-terminal domain RZ95_07770 PF00108 Thiolase, N-terminal domain RZ95_07795 PF12170 DNA polymerase III tau subunit V interacting with alpha RZ95_07795 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RZ95_07795 PF12169 DNA polymerase III subunits gamma and tau domain III RZ95_07800 PF03061 Thioesterase superfamily RZ95_07805 PF00465 Iron-containing alcohol dehydrogenase RZ95_07810 PF01451 Low molecular weight phosphotyrosine protein phosphatase RZ95_07815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RZ95_07815 PF01565 FAD binding domain RZ95_07830 PF01645 Conserved region in glutamate synthase RZ95_07835 PF00196 Bacterial regulatory proteins, luxR family RZ95_07835 PF00072 Response regulator receiver domain RZ95_07840 PF05231 MASE1 RZ95_07840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_07840 PF07730 Histidine kinase RZ95_07845 PF08007 Cupin superfamily protein RZ95_07855 PF02545 Maf-like protein RZ95_07865 PF00162 Phosphoglycerate kinase RZ95_07875 PF01116 Fructose-bisphosphate aldolase class-II RZ95_07885 PF00881 Nitroreductase family RZ95_07900 PF00149 Calcineurin-like phosphoesterase RZ95_07905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RZ95_07910 PF00749 tRNA synthetases class I (E and Q), catalytic domain RZ95_07910 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RZ95_07915 PF01062 Bestrophin, RFP-TM, chloride channel RZ95_07945 PF05958 tRNA (Uracil-5-)-methyltransferase RZ95_07950 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RZ95_07950 PF14850 DNA-binding domain of Proline dehydrogenase RZ95_07950 PF01619 Proline dehydrogenase RZ95_07950 PF00171 Aldehyde dehydrogenase family RZ95_07955 PF01037 Lrp/AsnC ligand binding domain RZ95_07960 PF00474 Sodium:solute symporter family RZ95_07970 PF02559 CarD-like/TRCF domain RZ95_07970 PF03461 TRCF domain RZ95_07970 PF17757 UvrB interaction domain RZ95_07970 PF00270 DEAD/DEAH box helicase RZ95_07970 PF00271 Helicase conserved C-terminal domain RZ95_07980 PF00211 Adenylate and Guanylate cyclase catalytic domain RZ95_07985 PF00111 2Fe-2S iron-sulfur cluster binding domain RZ95_07990 PF00012 Hsp70 protein RZ95_07995 PF07743 HSCB C-terminal oligomerisation domain RZ95_07995 PF00226 DnaJ domain RZ95_08000 PF01521 Iron-sulphur cluster biosynthesis RZ95_08005 PF01592 NifU-like N terminal domain RZ95_08010 PF00266 Aminotransferase class-V RZ95_08015 PF02082 Transcriptional regulator RZ95_08030 PF00216 Bacterial DNA-binding protein RZ95_08055 PF00267 Gram-negative porin RZ95_08060 PF01230 HIT domain RZ95_08075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RZ95_08075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RZ95_08085 PF01053 Cys/Met metabolism PLP-dependent enzyme RZ95_08090 PF02575 YbaB/EbfC DNA-binding family RZ95_08095 PF13662 Toprim domain RZ95_08095 PF02132 RecR protein RZ95_08110 PF00570 HRDC domain RZ95_08110 PF01612 3'-5' exonuclease RZ95_08115 PF05166 YcgL domain RZ95_08125 PF17862 AAA+ lid domain RZ95_08125 PF00004 ATPase family associated with various cellular activities (AAA) RZ95_08125 PF01434 Peptidase family M41 RZ95_08135 PF00291 Pyridoxal-phosphate dependent enzyme RZ95_08140 PF00478 IMP dehydrogenase / GMP reductase domain RZ95_08140 PF00571 CBS domain RZ95_08170 PF05193 Peptidase M16 inactive domain RZ95_08170 PF00675 Insulinase (Peptidase family M16) RZ95_08175 PF00448 SRP54-type protein, GTPase domain RZ95_08175 PF02881 SRP54-type protein, helical bundle domain RZ95_08225 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_08225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_08225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_08230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_08230 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_08230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_08235 PF03109 ABC1 family RZ95_08250 PF05175 Methyltransferase small domain RZ95_08255 PF01264 Chorismate synthase RZ95_08265 PF01266 FAD dependent oxidoreductase RZ95_08275 PF00990 Diguanylate cyclase, GGDEF domain RZ95_08280 PF01425 Amidase RZ95_08285 PF12832 MFS_1 like family RZ95_08300 PF15887 Putative zinc-binding metallo-peptidase RZ95_08300 PF10005 zinc-ribbon domain RZ95_08315 PF01402 Ribbon-helix-helix protein, copG family RZ95_08315 PF08753 NikR C terminal nickel binding domain RZ95_08325 PF00893 Small Multidrug Resistance protein RZ95_08340 PF00005 ABC transporter RZ95_08370 PF04143 Sulphur transport RZ95_08380 PF04273 Putative phosphatase (DUF442) RZ95_08380 PF00753 Metallo-beta-lactamase superfamily RZ95_08385 PF12697 Alpha/beta hydrolase family RZ95_08415 PF07724 AAA domain (Cdc48 subfamily) RZ95_08415 PF10431 C-terminal, D2-small domain, of ClpB protein RZ95_08415 PF17871 AAA lid domain RZ95_08415 PF00004 ATPase family associated with various cellular activities (AAA) RZ95_08425 PF13340 Putative transposase of IS4/5 family (DUF4096) RZ95_08480 PF00691 OmpA family RZ95_08480 PF05736 OprF membrane domain RZ95_08540 PF11798 IMS family HHH motif RZ95_08540 PF00817 impB/mucB/samB family RZ95_08540 PF11799 impB/mucB/samB family C-terminal domain RZ95_08540 PF13438 Domain of unknown function (DUF4113) RZ95_08570 PF09828 Chromate resistance exported protein RZ95_08575 PF02417 Chromate transporter RZ95_08580 PF02705 K+ potassium transporter RZ95_08590 PF02583 Metal-sensitive transcriptional repressor RZ95_08600 PF07690 Major Facilitator Superfamily RZ95_08620 PF00873 AcrB/AcrD/AcrF family RZ95_08625 PF00529 HlyD membrane-fusion protein of T1SS RZ95_08625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RZ95_08640 PF03471 Transporter associated domain RZ95_08640 PF03741 Integral membrane protein TerC family RZ95_08645 PF17755 UvrA DNA-binding domain RZ95_08650 PF00107 Zinc-binding dehydrogenase RZ95_08650 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_08655 PF00440 Bacterial regulatory proteins, tetR family RZ95_08655 PF16925 Tetracyclin repressor-like, C-terminal domain RZ95_08695 PF13359 DDE superfamily endonuclease RZ95_08695 PF13613 Helix-turn-helix of DDE superfamily endonuclease RZ95_08715 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_08715 PF00107 Zinc-binding dehydrogenase RZ95_08725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RZ95_08725 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_08730 PF00364 Biotin-requiring enzyme RZ95_08730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RZ95_08730 PF02817 e3 binding domain RZ95_08735 PF02780 Transketolase, C-terminal domain RZ95_08735 PF02779 Transketolase, pyrimidine binding domain RZ95_08740 PF00676 Dehydrogenase E1 component RZ95_08745 PF04055 Radical SAM superfamily RZ95_08755 PF00486 Transcriptional regulatory protein, C terminal RZ95_08755 PF00072 Response regulator receiver domain RZ95_08760 PF00989 PAS fold RZ95_08760 PF00512 His Kinase A (phospho-acceptor) domain RZ95_08760 PF16736 Single Cache-like RZ95_08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_08770 PF00873 AcrB/AcrD/AcrF family RZ95_08775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RZ95_08775 PF00529 HlyD membrane-fusion protein of T1SS RZ95_08785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_08785 PF03466 LysR substrate binding domain RZ95_08805 PF17763 Glutaminase/Asparaginase C-terminal domain RZ95_08805 PF00710 Asparaginase, N-terminal RZ95_08810 PF00106 short chain dehydrogenase RZ95_08815 PF07715 TonB-dependent Receptor Plug Domain RZ95_08815 PF00593 TonB dependent receptor RZ95_08825 PF07715 TonB-dependent Receptor Plug Domain RZ95_08825 PF00593 TonB dependent receptor RZ95_08830 PF00873 AcrB/AcrD/AcrF family RZ95_08835 PF00529 HlyD membrane-fusion protein of T1SS RZ95_08835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RZ95_08850 PF01545 Cation efflux family RZ95_08855 PF00106 short chain dehydrogenase RZ95_08875 PF07690 Major Facilitator Superfamily RZ95_08880 PF03466 LysR substrate binding domain RZ95_08880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_08885 PF13378 Enolase C-terminal domain-like RZ95_08885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RZ95_08890 PF02426 Muconolactone delta-isomerase RZ95_08895 PF00775 Dioxygenase RZ95_08895 PF04444 Catechol dioxygenase N terminus RZ95_08900 PF00355 Rieske [2Fe-2S] domain RZ95_08900 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RZ95_08905 PF00866 Ring hydroxylating beta subunit RZ95_08910 PF00175 Oxidoreductase NAD-binding domain RZ95_08910 PF00111 2Fe-2S iron-sulfur cluster binding domain RZ95_08910 PF00970 Oxidoreductase FAD-binding domain RZ95_08915 PF00106 short chain dehydrogenase RZ95_08920 PF03594 Benzoate membrane transport protein RZ95_08925 PF01144 Coenzyme A transferase RZ95_08930 PF01144 Coenzyme A transferase RZ95_08935 PF00108 Thiolase, N-terminal domain RZ95_08935 PF02803 Thiolase, C-terminal domain RZ95_08940 PF12146 Serine aminopeptidase, S33 RZ95_08950 PF01220 Dehydroquinase class II RZ95_08955 PF00364 Biotin-requiring enzyme RZ95_08960 PF02785 Biotin carboxylase C-terminal domain RZ95_08960 PF00289 Biotin carboxylase, N-terminal domain RZ95_08960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RZ95_08970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RZ95_08970 PF02785 Biotin carboxylase C-terminal domain RZ95_08970 PF00289 Biotin carboxylase, N-terminal domain RZ95_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_08985 PF03466 LysR substrate binding domain RZ95_08990 PF00108 Thiolase, N-terminal domain RZ95_08990 PF02803 Thiolase, C-terminal domain RZ95_08995 PF08360 QacR-like protein, C-terminal region RZ95_08995 PF00440 Bacterial regulatory proteins, tetR family RZ95_09000 PF00291 Pyridoxal-phosphate dependent enzyme RZ95_09005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RZ95_09005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RZ95_09010 PF00860 Permease family RZ95_09015 PF01613 Flavin reductase like domain RZ95_09020 PF01042 Endoribonuclease L-PSP RZ95_09025 PF00857 Isochorismatase family RZ95_09030 PF00296 Luciferase-like monooxygenase RZ95_09035 PF12697 Alpha/beta hydrolase family RZ95_09045 PF00916 Sulfate permease family RZ95_09045 PF01740 STAS domain RZ95_09050 PF00375 Sodium:dicarboxylate symporter family RZ95_09060 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) RZ95_09065 PF00924 Mechanosensitive ion channel RZ95_09075 PF00005 ABC transporter RZ95_09075 PF00664 ABC transporter transmembrane region RZ95_09080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RZ95_09080 PF12833 Helix-turn-helix domain RZ95_09085 PF01597 Glycine cleavage H-protein RZ95_09095 PF00437 Type II/IV secretion system protein RZ95_09100 PF00793 DAHP synthetase I family RZ95_09105 PF03707 Bacterial signalling protein N terminal repeat RZ95_09105 PF00990 Diguanylate cyclase, GGDEF domain RZ95_09105 PF00563 EAL domain RZ95_09110 PF00487 Fatty acid desaturase RZ95_09120 PF00107 Zinc-binding dehydrogenase RZ95_09120 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_09125 PF13091 PLD-like domain RZ95_09145 PF06865 Pyrimidine/purine nucleoside phosphorylase RZ95_09150 PF00106 short chain dehydrogenase RZ95_09190 PF00206 Lyase RZ95_09190 PF10415 Fumarase C C-terminus RZ95_09195 PF16363 GDP-mannose 4,6 dehydratase RZ95_09240 PF13340 Putative transposase of IS4/5 family (DUF4096) RZ95_09330 PF10548 P22AR C-terminal domain RZ95_09330 PF08346 AntA/AntB antirepressor RZ95_09420 PF04607 Region found in RelA / SpoT proteins RZ95_09420 PF02824 TGS domain RZ95_09420 PF13291 ACT domain RZ95_09555 PF00589 Phage integrase family RZ95_09560 PF02635 DsrE/DsrF-like family RZ95_09580 PF01638 HxlR-like helix-turn-helix RZ95_09585 PF13419 Haloacid dehalogenase-like hydrolase RZ95_09590 PF03466 LysR substrate binding domain RZ95_09590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_09595 PF03788 LrgA family RZ95_09600 PF04172 LrgB-like family RZ95_09610 PF00593 TonB dependent receptor RZ95_09610 PF07715 TonB-dependent Receptor Plug Domain RZ95_09615 PF07690 Major Facilitator Superfamily RZ95_09630 PF04183 IucA / IucC family RZ95_09630 PF06276 Ferric iron reductase FhuF-like transporter RZ95_09635 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RZ95_09640 PF06276 Ferric iron reductase FhuF-like transporter RZ95_09640 PF04183 IucA / IucC family RZ95_09645 PF04073 Aminoacyl-tRNA editing domain RZ95_09650 PF00487 Fatty acid desaturase RZ95_09655 PF12833 Helix-turn-helix domain RZ95_09655 PF12852 Cupin RZ95_09660 PF18381 YcaO cyclodehydratase C-terminal domain RZ95_09660 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding RZ95_09665 PF02684 Lipid-A-disaccharide synthetase RZ95_09685 PF01925 Sulfite exporter TauE/SafE RZ95_09690 PF00793 DAHP synthetase I family RZ95_09700 PF02542 YgbB family RZ95_09710 PF02464 Competence-damaged protein RZ95_09710 PF00994 Probable molybdopterin binding domain RZ95_09710 PF18146 Damage-inducible protein CinA KH domain RZ95_09735 PF01553 Acyltransferase RZ95_09740 PF01709 Transcriptional regulator RZ95_09760 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RZ95_09760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_09765 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RZ95_09765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_09770 PF00296 Luciferase-like monooxygenase RZ95_09775 PF03180 NLPA lipoprotein RZ95_09785 PF09383 NIL domain RZ95_09785 PF00005 ABC transporter RZ95_09790 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_09795 PF06071 Protein of unknown function (DUF933) RZ95_09795 PF01926 50S ribosome-binding GTPase RZ95_09810 PF13545 Crp-like helix-turn-helix domain RZ95_09810 PF00027 Cyclic nucleotide-binding domain RZ95_09820 PF03591 AzlC protein RZ95_09825 PF05437 Branched-chain amino acid transport protein (AzlD) RZ95_09830 PF02222 ATP-grasp domain RZ95_09835 PF08335 GlnD PII-uridylyltransferase RZ95_09835 PF01966 HD domain RZ95_09835 PF01909 Nucleotidyltransferase domain RZ95_09840 PF00155 Aminotransferase class I and II RZ95_09845 PF07715 TonB-dependent Receptor Plug Domain RZ95_09845 PF00593 TonB dependent receptor RZ95_09860 PF00255 Glutathione peroxidase RZ95_09865 PF01641 SelR domain RZ95_09870 PF00155 Aminotransferase class I and II RZ95_09890 PF13192 Thioredoxin domain RZ95_09890 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_09915 PF03060 Nitronate monooxygenase RZ95_09920 PF01207 Dihydrouridine synthase (Dus) RZ95_09925 PF01292 Prokaryotic cytochrome b561 RZ95_09930 PF00990 Diguanylate cyclase, GGDEF domain RZ95_09930 PF00072 Response regulator receiver domain RZ95_09945 PF00313 'Cold-shock' DNA-binding domain RZ95_09955 PF00107 Zinc-binding dehydrogenase RZ95_09955 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_09960 PF01638 HxlR-like helix-turn-helix RZ95_09985 PF00313 'Cold-shock' DNA-binding domain RZ95_09995 PF07759 Protein of unknown function (DUF1615) RZ95_10010 PF00487 Fatty acid desaturase RZ95_10015 PF00111 2Fe-2S iron-sulfur cluster binding domain RZ95_10015 PF00175 Oxidoreductase NAD-binding domain RZ95_10015 PF00970 Oxidoreductase FAD-binding domain RZ95_10020 PF00440 Bacterial regulatory proteins, tetR family RZ95_10035 PF18339 RapA N-terminal Tudor like domain 1 RZ95_10035 PF18337 RapA N-terminal Tudor like domain RZ95_10035 PF12137 RNA polymerase recycling family C-terminal RZ95_10035 PF00271 Helicase conserved C-terminal domain RZ95_10035 PF00176 SNF2 family N-terminal domain RZ95_10040 PF00849 RNA pseudouridylate synthase RZ95_10055 PF00005 ABC transporter RZ95_10060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RZ95_10070 PF01979 Amidohydrolase family RZ95_10075 PF03466 LysR substrate binding domain RZ95_10075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_10080 PF02417 Chromate transporter RZ95_10090 PF02321 Outer membrane efflux protein RZ95_10095 PF13737 Transposase DDE domain RZ95_10100 PF00892 EamA-like transporter family RZ95_10105 PF00529 HlyD membrane-fusion protein of T1SS RZ95_10110 PF00664 ABC transporter transmembrane region RZ95_10110 PF03412 Peptidase C39 family RZ95_10110 PF00005 ABC transporter RZ95_10115 PF02321 Outer membrane efflux protein RZ95_10120 PF00535 Glycosyl transferase family 2 RZ95_10120 PF13181 Tetratricopeptide repeat RZ95_10150 PF00005 ABC transporter RZ95_10170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_10170 PF03466 LysR substrate binding domain RZ95_10175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RZ95_10175 PF01411 tRNA synthetases class II (A) RZ95_10175 PF02272 DHHA1 domain RZ95_10195 PF00717 Peptidase S24-like RZ95_10195 PF01726 LexA DNA binding domain RZ95_10200 PF00817 impB/mucB/samB family RZ95_10200 PF11798 IMS family HHH motif RZ95_10200 PF13438 Domain of unknown function (DUF4113) RZ95_10200 PF11799 impB/mucB/samB family C-terminal domain RZ95_10215 PF13737 Transposase DDE domain RZ95_10430 PF00589 Phage integrase family RZ95_10440 PF13559 Domain of unknown function (DUF4129) RZ95_10440 PF11992 Domain of unknown function (DUF3488) RZ95_10440 PF01841 Transglutaminase-like superfamily RZ95_10450 PF17863 AAA lid domain RZ95_10450 PF07726 ATPase family associated with various cellular activities (AAA) RZ95_10460 PF04328 Selenoprotein, putative RZ95_10465 PF02554 Carbon starvation protein CstA RZ95_10465 PF13722 5TM C-terminal transporter carbon starvation CstA RZ95_10470 PF09285 Elongation factor P, C-terminal RZ95_10470 PF08207 Elongation factor P (EF-P) KOW-like domain RZ95_10470 PF01132 Elongation factor P (EF-P) OB domain RZ95_10475 PF04055 Radical SAM superfamily RZ95_10490 PF01197 Ribosomal protein L31 RZ95_10495 PF13593 SBF-like CPA transporter family (DUF4137) RZ95_10500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RZ95_10505 PF07690 Major Facilitator Superfamily RZ95_10510 PF13654 AAA domain RZ95_10510 PF05362 Lon protease (S16) C-terminal proteolytic domain RZ95_10515 PF00462 Glutaredoxin RZ95_10520 PF00202 Aminotransferase class-III RZ95_10525 PF08496 Peptidase family S49 N-terminal RZ95_10525 PF01343 Peptidase family S49 RZ95_10530 PF00005 ABC transporter RZ95_10535 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_10540 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_10545 PF12849 PBP superfamily domain RZ95_10550 PF00282 Pyridoxal-dependent decarboxylase conserved domain RZ95_10555 PF00202 Aminotransferase class-III RZ95_10570 PF01569 PAP2 superfamily RZ95_10575 PF00696 Amino acid kinase family RZ95_10575 PF01472 PUA domain RZ95_10580 PF01018 GTP1/OBG RZ95_10580 PF01926 50S ribosome-binding GTPase RZ95_10585 PF01638 HxlR-like helix-turn-helix RZ95_10590 PF05368 NmrA-like family RZ95_10605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RZ95_10605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RZ95_10610 PF00892 EamA-like transporter family RZ95_10620 PF00271 Helicase conserved C-terminal domain RZ95_10620 PF02151 UvrB/uvrC motif RZ95_10620 PF12344 Ultra-violet resistance protein B RZ95_10620 PF17757 UvrB interaction domain RZ95_10620 PF04851 Type III restriction enzyme, res subunit RZ95_10635 PF03707 Bacterial signalling protein N terminal repeat RZ95_10635 PF00563 EAL domain RZ95_10635 PF00990 Diguanylate cyclase, GGDEF domain RZ95_10645 PF13340 Putative transposase of IS4/5 family (DUF4096) RZ95_10655 PF00892 EamA-like transporter family RZ95_10680 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) RZ95_10685 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RZ95_10690 PF02565 Recombination protein O C terminal RZ95_10690 PF11967 Recombination protein O N terminal RZ95_10700 PF01926 50S ribosome-binding GTPase RZ95_10700 PF07650 KH domain RZ95_10705 PF14622 Ribonuclease-III-like RZ95_10705 PF00035 Double-stranded RNA binding motif RZ95_10715 PF10502 Signal peptidase, peptidase S26 RZ95_10720 PF00679 Elongation factor G C-terminus RZ95_10720 PF00009 Elongation factor Tu GTP binding domain RZ95_10720 PF06421 GTP-binding protein LepA C-terminus RZ95_10720 PF03144 Elongation factor Tu domain 2 RZ95_10735 PF02910 Fumarate reductase flavoprotein C-term RZ95_10735 PF00890 FAD binding domain RZ95_10745 PF02223 Thymidylate kinase RZ95_10750 PF02618 YceG-like family RZ95_10770 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_10775 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_10780 PF00005 ABC transporter RZ95_10780 PF12857 TOBE-like domain RZ95_10785 PF03466 LysR substrate binding domain RZ95_10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_10800 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RZ95_10800 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_10800 PF14602 Hexapeptide repeat of succinyl-transferase RZ95_10805 PF04055 Radical SAM superfamily RZ95_10810 PF06508 Queuosine biosynthesis protein QueC RZ95_10825 PF00578 AhpC/TSA family RZ95_10830 PF01810 LysE type translocator RZ95_10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_10835 PF03466 LysR substrate binding domain RZ95_10840 PF04264 YceI-like domain RZ95_10845 PF01467 Cytidylyltransferase-like RZ95_10845 PF00293 NUDIX domain RZ95_10850 PF00378 Enoyl-CoA hydratase/isomerase RZ95_10860 PF01784 NIF3 (NGG1p interacting factor 3) RZ95_10870 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RZ95_10870 PF02769 AIR synthase related protein, C-terminal domain RZ95_10870 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RZ95_10885 PF01966 HD domain RZ95_10890 PF07499 RuvA, C-terminal domain RZ95_10890 PF01330 RuvA N terminal domain RZ95_10895 PF17864 RuvB AAA lid domain RZ95_10895 PF05491 RuvB C-terminal winged helix domain RZ95_10895 PF05496 Holliday junction DNA helicase RuvB P-loop domain RZ95_10910 PF03061 Thioesterase superfamily RZ95_10915 PF01618 MotA/TolQ/ExbB proton channel family RZ95_10920 PF02472 Biopolymer transport protein ExbD/TolR RZ95_10930 PF04052 TolB amino-terminal domain RZ95_10930 PF07676 WD40-like Beta Propeller Repeat RZ95_10935 PF00691 OmpA family RZ95_10945 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RZ95_10950 PF08032 RNA 2'-O ribose methyltransferase substrate binding RZ95_10950 PF00588 SpoU rRNA Methylase family RZ95_10980 PF00308 Bacterial dnaA protein RZ95_10980 PF08299 Bacterial dnaA protein helix-turn-helix RZ95_10985 PF01594 AI-2E family transporter RZ95_10990 PF00586 AIR synthase related protein, N-terminal domain RZ95_10990 PF02769 AIR synthase related protein, C-terminal domain RZ95_10995 PF00551 Formyl transferase RZ95_11005 PF06965 Na+/H+ antiporter 1 RZ95_11005 PF01343 Peptidase family S49 RZ95_11015 PF00753 Metallo-beta-lactamase superfamily RZ95_11015 PF13567 Domain of unknown function (DUF4131) RZ95_11015 PF03772 Competence protein RZ95_11020 PF00005 ABC transporter RZ95_11035 PF00892 EamA-like transporter family RZ95_11040 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RZ95_11050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RZ95_11050 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_11055 PF04055 Radical SAM superfamily RZ95_11060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_11060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RZ95_11060 PF09317 Domain of unknown function (DUF1974) RZ95_11060 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_11100 PF05221 S-adenosyl-L-homocysteine hydrolase RZ95_11100 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RZ95_11105 PF02219 Methylenetetrahydrofolate reductase RZ95_11110 PF04452 RNA methyltransferase RZ95_11115 PF00563 EAL domain RZ95_11115 PF00498 FHA domain RZ95_11115 PF00990 Diguanylate cyclase, GGDEF domain RZ95_11120 PF00390 Malic enzyme, N-terminal domain RZ95_11120 PF03949 Malic enzyme, NAD binding domain RZ95_11120 PF01515 Phosphate acetyl/butaryl transferase RZ95_11125 PF01743 Poly A polymerase head domain RZ95_11125 PF12627 Probable RNA and SrmB- binding site of polymerase A RZ95_11130 PF00152 tRNA synthetases class II (D, K and N) RZ95_11135 PF11890 Domain of unknown function (DUF3410) RZ95_11135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RZ95_11135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RZ95_11155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RZ95_11155 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_11160 PF01565 FAD binding domain RZ95_11160 PF09330 D-lactate dehydrogenase, membrane binding RZ95_11165 PF01070 FMN-dependent dehydrogenase RZ95_11170 PF00392 Bacterial regulatory proteins, gntR family RZ95_11170 PF07729 FCD domain RZ95_11175 PF02652 L-lactate permease RZ95_11180 PF00764 Arginosuccinate synthase RZ95_11185 PF01590 GAF domain RZ95_11185 PF00990 Diguanylate cyclase, GGDEF domain RZ95_11185 PF00563 EAL domain RZ95_11185 PF00360 Phytochrome region RZ95_11190 PF01979 Amidohydrolase family RZ95_11195 PF00929 Exonuclease RZ95_11205 PF00324 Amino acid permease RZ95_11215 PF00324 Amino acid permease RZ95_11240 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family RZ95_11250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RZ95_11250 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_11255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RZ95_11255 PF00005 ABC transporter RZ95_11260 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_11260 PF12911 N-terminal TM domain of oligopeptide transport permease C RZ95_11265 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_11270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RZ95_11275 PF01464 Transglycosylase SLT domain RZ95_11275 PF01476 LysM domain RZ95_11280 PF00929 Exonuclease RZ95_11290 PF09297 NADH pyrophosphatase zinc ribbon domain RZ95_11290 PF00293 NUDIX domain RZ95_11295 PF07859 alpha/beta hydrolase fold RZ95_11300 PF04972 BON domain RZ95_11305 PF02021 Uncharacterised protein family UPF0102 RZ95_11310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RZ95_11315 PF03466 LysR substrate binding domain RZ95_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_11320 PF01551 Peptidase family M23 RZ95_11320 PF01476 LysM domain RZ95_11325 PF01975 Survival protein SurE RZ95_11335 PF00199 Catalase RZ95_11365 PF00768 D-alanyl-D-alanine carboxypeptidase RZ95_11365 PF07943 Penicillin-binding protein 5, C-terminal domain RZ95_11370 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_11375 PF00293 NUDIX domain RZ95_11385 PF04356 Protein of unknown function (DUF489) RZ95_11390 PF08328 Adenylosuccinate lyase C-terminal RZ95_11390 PF00206 Lyase RZ95_11405 PF01494 FAD binding domain RZ95_11410 PF01494 FAD binding domain RZ95_11425 PF05195 Aminopeptidase P, N-terminal domain RZ95_11425 PF00557 Metallopeptidase family M24 RZ95_11430 PF03695 Uncharacterised protein family (UPF0149) RZ95_11465 PF02472 Biopolymer transport protein ExbD/TolR RZ95_11470 PF01618 MotA/TolQ/ExbB proton channel family RZ95_11475 PF02333 Phytase RZ95_11485 PF00990 Diguanylate cyclase, GGDEF domain RZ95_11485 PF00072 Response regulator receiver domain RZ95_11490 PF12833 Helix-turn-helix domain RZ95_11490 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RZ95_11500 PF00245 Alkaline phosphatase RZ95_11520 PF00593 TonB dependent receptor RZ95_11520 PF07715 TonB-dependent Receptor Plug Domain RZ95_11525 PF13737 Transposase DDE domain RZ95_11530 PF02785 Biotin carboxylase C-terminal domain RZ95_11530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RZ95_11530 PF00289 Biotin carboxylase, N-terminal domain RZ95_11530 PF00364 Biotin-requiring enzyme RZ95_11540 PF07286 Protein of unknown function (DUF1445) RZ95_11545 PF03746 LamB/YcsF family RZ95_11550 PF01566 Natural resistance-associated macrophage protein RZ95_11555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_11555 PF03466 LysR substrate binding domain RZ95_11565 PF13411 MerR HTH family regulatory protein RZ95_11570 PF01812 5-formyltetrahydrofolate cyclo-ligase family RZ95_11575 PF02190 ATP-dependent protease La (LON) substrate-binding domain RZ95_11575 PF00004 ATPase family associated with various cellular activities (AAA) RZ95_11575 PF05362 Lon protease (S16) C-terminal proteolytic domain RZ95_11585 PF04389 Peptidase family M28 RZ95_11590 PF02590 Predicted SPOUT methyltransferase RZ95_11595 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RZ95_11605 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RZ95_11605 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RZ95_11610 PF04060 Putative Fe-S cluster RZ95_11615 PF10576 Iron-sulfur binding domain of endonuclease III RZ95_11615 PF00633 Helix-hairpin-helix motif RZ95_11615 PF00730 HhH-GPD superfamily base excision DNA repair protein RZ95_11625 PF05191 Adenylate kinase, active site lid RZ95_11640 PF00905 Penicillin binding protein transpeptidase domain RZ95_11640 PF03717 Penicillin-binding Protein dimerisation domain RZ95_11660 PF01553 Acyltransferase RZ95_11670 PF00884 Sulfatase RZ95_11675 PF04055 Radical SAM superfamily RZ95_11675 PF13186 Iron-sulfur cluster-binding domain RZ95_11685 PF00118 TCP-1/cpn60 chaperonin family RZ95_11690 PF00166 Chaperonin 10 Kd subunit RZ95_11700 PF00781 Diacylglycerol kinase catalytic domain RZ95_11705 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain RZ95_11705 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain RZ95_11710 PF01266 FAD dependent oxidoreductase RZ95_11710 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RZ95_11715 PF00083 Sugar (and other) transporter RZ95_11730 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RZ95_11730 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RZ95_11755 PF14765 Polyketide synthase dehydratase RZ95_11755 PF00698 Acyl transferase domain RZ95_11755 PF00550 Phosphopantetheine attachment site RZ95_11755 PF08659 KR domain RZ95_11755 PF00109 Beta-ketoacyl synthase, N-terminal domain RZ95_11755 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_11755 PF16197 Ketoacyl-synthetase C-terminal extension RZ95_11755 PF02801 Beta-ketoacyl synthase, C-terminal domain RZ95_11770 PF03551 Transcriptional regulator PadR-like family RZ95_11785 PF00009 Elongation factor Tu GTP binding domain RZ95_11790 PF01507 Phosphoadenosine phosphosulfate reductase family RZ95_11795 PF13737 Transposase DDE domain RZ95_11800 PF14052 Capsule assembly protein Wzi RZ95_11805 PF01336 OB-fold nucleic acid binding domain RZ95_11805 PF00152 tRNA synthetases class II (D, K and N) RZ95_11815 PF00156 Phosphoribosyl transferase domain RZ95_11820 PF00301 Rubredoxin RZ95_11825 PF18113 Rubredoxin binding C-terminal domain RZ95_11825 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_11830 PF00561 alpha/beta hydrolase fold RZ95_11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_11835 PF03466 LysR substrate binding domain RZ95_11840 PF13089 Polyphosphate kinase N-terminal domain RZ95_11840 PF17941 Polyphosphate kinase C-terminal domain 1 RZ95_11840 PF13090 Polyphosphate kinase C-terminal domain 2 RZ95_11840 PF02503 Polyphosphate kinase middle domain RZ95_11845 PF00912 Transglycosylase RZ95_11850 PF01694 Rhomboid family RZ95_11860 PF00005 ABC transporter RZ95_11865 PF13472 GDSL-like Lipase/Acylhydrolase family RZ95_11870 PF00484 Carbonic anhydrase RZ95_11875 PF00561 alpha/beta hydrolase fold RZ95_11885 PF07715 TonB-dependent Receptor Plug Domain RZ95_11885 PF00593 TonB dependent receptor RZ95_11890 PF01521 Iron-sulphur cluster biosynthesis RZ95_11890 PF01106 NifU-like domain RZ95_11910 PF01384 Phosphate transporter family RZ95_11915 PF02607 B12 binding domain RZ95_11915 PF02965 Vitamin B12 dependent methionine synthase, activation domain RZ95_11915 PF00809 Pterin binding enzyme RZ95_11915 PF02574 Homocysteine S-methyltransferase RZ95_11915 PF02310 B12 binding domain RZ95_11930 PF04480 Protein of unknown function (DUF559) RZ95_11940 PF07690 Major Facilitator Superfamily RZ95_11945 PF12833 Helix-turn-helix domain RZ95_11945 PF02311 AraC-like ligand binding domain RZ95_11950 PF01327 Polypeptide deformylase RZ95_11955 PF00083 Sugar (and other) transporter RZ95_11955 PF08946 Osmosensory transporter coiled coil RZ95_11970 PF04973 Nicotinamide mononucleotide transporter RZ95_11975 PF00378 Enoyl-CoA hydratase/isomerase RZ95_11995 PF00583 Acetyltransferase (GNAT) family RZ95_12005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RZ95_12010 PF07152 YaeQ protein RZ95_12015 PF02492 CobW/HypB/UreG, nucleotide-binding domain RZ95_12015 PF07683 Cobalamin synthesis protein cobW C-terminal domain RZ95_12030 PF03061 Thioesterase superfamily RZ95_12035 PF01734 Patatin-like phospholipase RZ95_12040 PF02417 Chromate transporter RZ95_12045 PF01235 Sodium:alanine symporter family RZ95_12050 PF03616 Sodium/glutamate symporter RZ95_12070 PF07690 Major Facilitator Superfamily RZ95_12075 PF12805 FUSC-like inner membrane protein yccS RZ95_12085 PF00258 Flavodoxin RZ95_12085 PF00667 FAD binding domain RZ95_12085 PF00175 Oxidoreductase NAD-binding domain RZ95_12145 PF04304 Protein of unknown function (DUF454) RZ95_12160 PF01546 Peptidase family M20/M25/M40 RZ95_12160 PF07687 Peptidase dimerisation domain RZ95_12170 PF01584 CheW-like domain RZ95_12170 PF01584 CheW-like domain RZ95_12170 PF02895 Signal transducing histidine kinase, homodimeric domain RZ95_12170 PF01627 Hpt domain RZ95_12170 PF07194 P2 response regulator binding domain RZ95_12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_12170 PF01627 Hpt domain RZ95_12170 PF02895 Signal transducing histidine kinase, homodimeric domain RZ95_12170 PF07194 P2 response regulator binding domain RZ95_12175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RZ95_12175 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RZ95_12180 PF01584 CheW-like domain RZ95_12185 PF00072 Response regulator receiver domain RZ95_12190 PF00072 Response regulator receiver domain RZ95_12215 PF00873 AcrB/AcrD/AcrF family RZ95_12220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RZ95_12220 PF04073 Aminoacyl-tRNA editing domain RZ95_12220 PF03129 Anticodon binding domain RZ95_12245 PF00692 dUTPase RZ95_12255 PF16868 NMT1-like family RZ95_12270 PF10609 NUBPL iron-transfer P-loop NTPase RZ95_12295 PF09334 tRNA synthetases class I (M) RZ95_12295 PF01588 Putative tRNA binding domain RZ95_12310 PF05643 Putative bacterial lipoprotein (DUF799) RZ95_12320 PF03783 Curli production assembly/transport component CsgG RZ95_12330 PF06100 MCRA family RZ95_12355 PF13533 Biotin-lipoyl like RZ95_12360 PF00291 Pyridoxal-phosphate dependent enzyme RZ95_12375 PF05552 Conserved TM helix RZ95_12390 PF00497 Bacterial extracellular solute-binding proteins, family 3 RZ95_12395 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_12400 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_12405 PF00005 ABC transporter RZ95_12410 PF00194 Eukaryotic-type carbonic anhydrase RZ95_12415 PF00909 Ammonium Transporter Family RZ95_12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_12430 PF00512 His Kinase A (phospho-acceptor) domain RZ95_12430 PF08521 Two-component sensor kinase N-terminal RZ95_12435 PF00072 Response regulator receiver domain RZ95_12435 PF00486 Transcriptional regulatory protein, C terminal RZ95_12440 PF08019 Phosphoethanolamine transferase EptA/EptB RZ95_12440 PF00884 Sulfatase RZ95_12470 PF01734 Patatin-like phospholipase RZ95_12480 PF01145 SPFH domain / Band 7 family RZ95_12485 PF00348 Polyprenyl synthetase RZ95_12490 PF04303 PrpF protein RZ95_12495 PF00324 Amino acid permease RZ95_12505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RZ95_12510 PF00324 Amino acid permease RZ95_12515 PF00155 Aminotransferase class I and II RZ95_12530 PF14497 Glutathione S-transferase, C-terminal domain RZ95_12530 PF02798 Glutathione S-transferase, N-terminal domain RZ95_12545 PF03358 NADPH-dependent FMN reductase RZ95_12550 PF01758 Sodium Bile acid symporter family RZ95_12560 PF01022 Bacterial regulatory protein, arsR family RZ95_12565 PF03960 ArsC family RZ95_12570 PF05199 GMC oxidoreductase RZ95_12575 PF00171 Aldehyde dehydrogenase family RZ95_12580 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RZ95_12580 PF12833 Helix-turn-helix domain RZ95_12600 PF01507 Phosphoadenosine phosphosulfate reductase family RZ95_12605 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain RZ95_12605 PF06974 Protein of unknown function (DUF1298) RZ95_12610 PF00575 S1 RNA binding domain RZ95_12610 PF10150 Ribonuclease E/G family RZ95_12615 PF02545 Maf-like protein RZ95_12620 PF04093 rod shape-determining protein MreD RZ95_12625 PF04085 rod shape-determining protein MreC RZ95_12635 PF02686 Glu-tRNAGln amidotransferase C subunit RZ95_12640 PF01425 Amidase RZ95_12645 PF02637 GatB domain RZ95_12645 PF02934 GatB/GatE catalytic domain RZ95_12685 PF05992 SbmA/BacA-like family RZ95_12705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_12705 PF03466 LysR substrate binding domain RZ95_12710 PF01144 Coenzyme A transferase RZ95_12715 PF01144 Coenzyme A transferase RZ95_12725 PF00593 TonB dependent receptor RZ95_12725 PF07715 TonB-dependent Receptor Plug Domain RZ95_12730 PF01011 PQQ enzyme repeat RZ95_12730 PF13360 PQQ-like domain RZ95_12735 PF04966 Carbohydrate-selective porin, OprB family RZ95_12740 PF05048 Periplasmic copper-binding protein (NosD) RZ95_12745 PF01487 Type I 3-dehydroquinase RZ95_12750 PF00775 Dioxygenase RZ95_12755 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal RZ95_12755 PF00775 Dioxygenase RZ95_12760 PF02627 Carboxymuconolactone decarboxylase family RZ95_12765 PF07690 Major Facilitator Superfamily RZ95_12770 PF00561 alpha/beta hydrolase fold RZ95_12775 PF10397 Adenylosuccinate lyase C-terminus RZ95_12775 PF00206 Lyase RZ95_12780 PF00108 Thiolase, N-terminal domain RZ95_12780 PF02803 Thiolase, C-terminal domain RZ95_12785 PF01144 Coenzyme A transferase RZ95_12790 PF01144 Coenzyme A transferase RZ95_12795 PF01614 Bacterial transcriptional regulator RZ95_12795 PF09339 IclR helix-turn-helix domain RZ95_12800 PF00842 Alanine racemase, C-terminal domain RZ95_12800 PF01168 Alanine racemase, N-terminal domain RZ95_12805 PF00324 Amino acid permease RZ95_12810 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RZ95_12815 PF04996 Succinylarginine dihydrolase RZ95_12820 PF00171 Aldehyde dehydrogenase family RZ95_12825 PF04958 Arginine N-succinyltransferase beta subunit RZ95_12830 PF00202 Aminotransferase class-III RZ95_12835 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RZ95_12835 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RZ95_12840 PF01037 Lrp/AsnC ligand binding domain RZ95_12855 PF00171 Aldehyde dehydrogenase family RZ95_12860 PF00202 Aminotransferase class-III RZ95_12865 PF00155 Aminotransferase class I and II RZ95_12865 PF00392 Bacterial regulatory proteins, gntR family RZ95_12870 PF00324 Amino acid permease RZ95_12885 PF01654 Cytochrome bd terminal oxidase subunit I RZ95_12890 PF02322 Cytochrome bd terminal oxidase subunit II RZ95_12895 PF00155 Aminotransferase class I and II RZ95_12895 PF00392 Bacterial regulatory proteins, gntR family RZ95_12905 PF04172 LrgB-like family RZ95_12910 PF03788 LrgA family RZ95_12930 PF01037 Lrp/AsnC ligand binding domain RZ95_12935 PF00892 EamA-like transporter family RZ95_12940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_12940 PF03466 LysR substrate binding domain RZ95_12945 PF07690 Major Facilitator Superfamily RZ95_12990 PF00563 EAL domain RZ95_12990 PF00990 Diguanylate cyclase, GGDEF domain RZ95_12990 PF03707 Bacterial signalling protein N terminal repeat RZ95_13000 PF04151 Bacterial pre-peptidase C-terminal domain RZ95_13010 PF16884 N-terminal domain of oxidoreductase RZ95_13010 PF00107 Zinc-binding dehydrogenase RZ95_13015 PF16925 Tetracyclin repressor-like, C-terminal domain RZ95_13015 PF00440 Bacterial regulatory proteins, tetR family RZ95_13025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RZ95_13035 PF00465 Iron-containing alcohol dehydrogenase RZ95_13045 PF00756 Putative esterase RZ95_13050 PF00107 Zinc-binding dehydrogenase RZ95_13050 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_13055 PF02583 Metal-sensitive transcriptional repressor RZ95_13060 PF00109 Beta-ketoacyl synthase, N-terminal domain RZ95_13060 PF00698 Acyl transferase domain RZ95_13060 PF00550 Phosphopantetheine attachment site RZ95_13060 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_13060 PF02801 Beta-ketoacyl synthase, C-terminal domain RZ95_13060 PF16197 Ketoacyl-synthetase C-terminal extension RZ95_13060 PF08659 KR domain RZ95_13060 PF14765 Polyketide synthase dehydratase RZ95_13065 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_13065 PF00107 Zinc-binding dehydrogenase RZ95_13070 PF03466 LysR substrate binding domain RZ95_13070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_13075 PF00106 short chain dehydrogenase RZ95_13080 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_13080 PF00107 Zinc-binding dehydrogenase RZ95_13095 PF13784 Fic/DOC family N-terminal RZ95_13095 PF02661 Fic/DOC family RZ95_13105 PF00925 GTP cyclohydrolase II RZ95_13110 PF00290 Tryptophan synthase alpha chain RZ95_13115 PF00291 Pyridoxal-phosphate dependent enzyme RZ95_13120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_13120 PF03466 LysR substrate binding domain RZ95_13135 PF00072 Response regulator receiver domain RZ95_13135 PF00486 Transcriptional regulatory protein, C terminal RZ95_13140 PF00512 His Kinase A (phospho-acceptor) domain RZ95_13140 PF08521 Two-component sensor kinase N-terminal RZ95_13140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_13180 PF09297 NADH pyrophosphatase zinc ribbon domain RZ95_13180 PF00293 NUDIX domain RZ95_13185 PF04244 Deoxyribodipyrimidine photo-lyase-related protein RZ95_13195 PF13333 Integrase core domain RZ95_13195 PF13276 HTH-like domain RZ95_13195 PF00665 Integrase core domain RZ95_13215 PF02384 N-6 DNA Methylase RZ95_13215 PF12161 HsdM N-terminal domain RZ95_13230 PF18766 SWI2/SNF2 ATPase RZ95_13230 PF12008 Type I restriction and modification enzyme - subunit R C terminal RZ95_13230 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RZ95_13260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RZ95_13260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RZ95_13265 PF07690 Major Facilitator Superfamily RZ95_13270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RZ95_13270 PF00529 HlyD membrane-fusion protein of T1SS RZ95_13275 PF03061 Thioesterase superfamily RZ95_13280 PF00490 Delta-aminolevulinic acid dehydratase RZ95_13285 PF01266 FAD dependent oxidoreductase RZ95_13290 PF08338 Domain of unknown function (DUF1731) RZ95_13290 PF01370 NAD dependent epimerase/dehydratase family RZ95_13300 PF00990 Diguanylate cyclase, GGDEF domain RZ95_13300 PF01590 GAF domain RZ95_13300 PF00360 Phytochrome region RZ95_13300 PF00563 EAL domain RZ95_13305 PF12320 Type 5 capsule protein repressor C-terminal domain RZ95_13305 PF00149 Calcineurin-like phosphoesterase RZ95_13320 PF01168 Alanine racemase, N-terminal domain RZ95_13325 PF00437 Type II/IV secretion system protein RZ95_13330 PF00437 Type II/IV secretion system protein RZ95_13335 PF01475 Ferric uptake regulator family RZ95_13340 PF04355 SmpA / OmlA family RZ95_13345 PF03658 RnfH family Ubiquitin RZ95_13355 PF01814 Hemerythrin HHE cation binding domain RZ95_13360 PF13936 Helix-turn-helix domain RZ95_13360 PF00665 Integrase core domain RZ95_13365 PF14864 Alkyl sulfatase C-terminal RZ95_13365 PF00753 Metallo-beta-lactamase superfamily RZ95_13365 PF14863 Alkyl sulfatase dimerisation RZ95_13375 PF00665 Integrase core domain RZ95_13375 PF13936 Helix-turn-helix domain RZ95_13380 PF13230 Glutamine amidotransferases class-II RZ95_13385 PF00696 Amino acid kinase family RZ95_13390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RZ95_13390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RZ95_13390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RZ95_13390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RZ95_13395 PF00692 dUTPase RZ95_13400 PF00580 UvrD/REP helicase N-terminal domain RZ95_13400 PF13361 UvrD-like helicase C-terminal domain RZ95_13405 PF00691 OmpA family RZ95_13405 PF13488 Glycine zipper RZ95_13410 PF01553 Acyltransferase RZ95_13420 PF03775 Septum formation inhibitor MinC, C-terminal domain RZ95_13425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RZ95_13430 PF03776 Septum formation topological specificity factor MinE RZ95_13445 PF17854 FtsK alpha domain RZ95_13445 PF01580 FtsK/SpoIIIE family RZ95_13445 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RZ95_13445 PF09397 Ftsk gamma domain RZ95_13450 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_13455 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RZ95_13460 PF04377 Arginine-tRNA-protein transferase, C terminus RZ95_13460 PF04376 Arginine-tRNA-protein transferase, N terminus RZ95_13465 PF00583 Acetyltransferase (GNAT) family RZ95_13480 PF03764 Elongation factor G, domain IV RZ95_13480 PF00009 Elongation factor Tu GTP binding domain RZ95_13480 PF03144 Elongation factor Tu domain 2 RZ95_13480 PF00679 Elongation factor G C-terminus RZ95_13480 PF14492 Elongation Factor G, domain II RZ95_13485 PF00177 Ribosomal protein S7p/S5e RZ95_13490 PF00164 Ribosomal protein S12/S23 RZ95_13500 PF02801 Beta-ketoacyl synthase, C-terminal domain RZ95_13500 PF00109 Beta-ketoacyl synthase, N-terminal domain RZ95_13510 PF01757 Acyltransferase family RZ95_13515 PF00324 Amino acid permease RZ95_13520 PF01042 Endoribonuclease L-PSP RZ95_13525 PF00842 Alanine racemase, C-terminal domain RZ95_13525 PF01168 Alanine racemase, N-terminal domain RZ95_13530 PF01266 FAD dependent oxidoreductase RZ95_13535 PF01037 Lrp/AsnC ligand binding domain RZ95_13545 PF13419 Haloacid dehalogenase-like hydrolase RZ95_13550 PF02581 Thiamine monophosphate synthase RZ95_13550 PF03070 TENA/THI-4/PQQC family RZ95_13550 PF08543 Phosphomethylpyrimidine kinase RZ95_13555 PF08378 Nuclease-related domain RZ95_13560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RZ95_13560 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RZ95_13565 PF00893 Small Multidrug Resistance protein RZ95_13570 PF00893 Small Multidrug Resistance protein RZ95_13585 PF00394 Multicopper oxidase RZ95_13585 PF07731 Multicopper oxidase RZ95_13585 PF07732 Multicopper oxidase RZ95_13595 PF00834 Ribulose-phosphate 3 epimerase family RZ95_13615 PF00756 Putative esterase RZ95_13625 PF04445 Putative SAM-dependent methyltransferase RZ95_13630 PF02673 Bacitracin resistance protein BacA RZ95_13635 PF00814 Glycoprotease family RZ95_13640 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_13645 PF00293 NUDIX domain RZ95_13685 PF04715 Anthranilate synthase component I, N terminal region RZ95_13685 PF00425 chorismate binding enzyme RZ95_13690 PF00155 Aminotransferase class I and II RZ95_13695 PF00815 Histidinol dehydrogenase RZ95_13705 PF01634 ATP phosphoribosyltransferase RZ95_13710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RZ95_13715 PF01722 BolA-like protein RZ95_13720 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RZ95_13725 PF00309 Sigma-54 factor, Activator interacting domain (AID) RZ95_13725 PF04552 Sigma-54, DNA binding domain RZ95_13725 PF04963 Sigma-54 factor, core binding domain RZ95_13730 PF01965 DJ-1/PfpI family RZ95_13750 PF07690 Major Facilitator Superfamily RZ95_13780 PF04333 MlaA lipoprotein RZ95_13785 PF07228 Stage II sporulation protein E (SpoIIE) RZ95_13785 PF13426 PAS domain RZ95_13795 PF00795 Carbon-nitrogen hydrolase RZ95_13800 PF02566 OsmC-like protein RZ95_13810 PF00437 Type II/IV secretion system protein RZ95_13830 PF01367 5'-3' exonuclease, C-terminal SAM fold RZ95_13830 PF01612 3'-5' exonuclease RZ95_13830 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RZ95_13830 PF00476 DNA polymerase family A RZ95_13835 PF02325 YGGT family RZ95_13840 PF14748 Pyrroline-5-carboxylate reductase dimerisation RZ95_13840 PF03807 NADP oxidoreductase coenzyme F420-dependent RZ95_13845 PF09179 TilS substrate binding domain RZ95_13845 PF01171 PP-loop family RZ95_13845 PF11734 TilS substrate C-terminal domain RZ95_13850 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RZ95_13855 PF02541 Ppx/GppA phosphatase family RZ95_13860 PF00085 Thioredoxin RZ95_13865 PF07498 Rho termination factor, N-terminal domain RZ95_13865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RZ95_13865 PF07497 Rho termination factor, RNA-binding domain RZ95_13875 PF00216 Bacterial DNA-binding protein RZ95_13880 PF03483 B3/4 domain RZ95_13880 PF01588 Putative tRNA binding domain RZ95_13880 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RZ95_13880 PF03147 Ferredoxin-fold anticodon binding domain RZ95_13880 PF03484 tRNA synthetase B5 domain RZ95_13885 PF01409 tRNA synthetases class II core domain (F) RZ95_13885 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RZ95_13905 PF00453 Ribosomal protein L20 RZ95_13910 PF01632 Ribosomal protein L35 RZ95_13925 PF09335 SNARE associated Golgi protein RZ95_13940 PF00043 Glutathione S-transferase, C-terminal domain RZ95_13940 PF02798 Glutathione S-transferase, N-terminal domain RZ95_13950 PF05198 Translation initiation factor IF-3, N-terminal domain RZ95_13950 PF00707 Translation initiation factor IF-3, C-terminal domain RZ95_13955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RZ95_13955 PF03129 Anticodon binding domain RZ95_13955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RZ95_13955 PF02824 TGS domain RZ95_13960 PF00501 AMP-binding enzyme RZ95_13960 PF13193 AMP-binding enzyme C-terminal domain RZ95_13965 PF04751 Protein of unknown function (DUF615) RZ95_13970 PF00381 PTS HPr component phosphorylation site RZ95_13975 PF03668 P-loop ATPase protein family RZ95_13980 PF02569 Pantoate-beta-alanine ligase RZ95_13985 PF02548 Ketopantoate hydroxymethyltransferase RZ95_13990 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RZ95_13995 PF01743 Poly A polymerase head domain RZ95_13995 PF12627 Probable RNA and SrmB- binding site of polymerase A RZ95_13995 PF12626 Polymerase A arginine-rich C-terminus RZ95_14005 PF03819 MazG nucleotide pyrophosphohydrolase domain RZ95_14015 PF13291 ACT domain RZ95_14015 PF04607 Region found in RelA / SpoT proteins RZ95_14015 PF02824 TGS domain RZ95_14020 PF05958 tRNA (Uracil-5-)-methyltransferase RZ95_14030 PF00291 Pyridoxal-phosphate dependent enzyme RZ95_14035 PF01627 Hpt domain RZ95_14035 PF00672 HAMP domain RZ95_14035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_14035 PF00512 His Kinase A (phospho-acceptor) domain RZ95_14035 PF00072 Response regulator receiver domain RZ95_14035 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RZ95_14040 PF00378 Enoyl-CoA hydratase/isomerase RZ95_14045 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RZ95_14045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RZ95_14050 PF01261 Xylose isomerase-like TIM barrel RZ95_14065 PF00672 HAMP domain RZ95_14065 PF00909 Ammonium Transporter Family RZ95_14075 PF02233 NAD(P) transhydrogenase beta subunit RZ95_14080 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RZ95_14085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RZ95_14085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RZ95_14090 PF07690 Major Facilitator Superfamily RZ95_14110 PF00120 Glutamine synthetase, catalytic domain RZ95_14115 PF00072 Response regulator receiver domain RZ95_14115 PF00486 Transcriptional regulatory protein, C terminal RZ95_14120 PF13493 Domain of unknown function (DUF4118) RZ95_14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_14120 PF00512 His Kinase A (phospho-acceptor) domain RZ95_14120 PF02702 Osmosensitive K+ channel His kinase sensor domain RZ95_14125 PF02669 K+-transporting ATPase, c chain RZ95_14135 PF03814 Potassium-transporting ATPase A subunit RZ95_14150 PF00593 TonB dependent receptor RZ95_14150 PF07715 TonB-dependent Receptor Plug Domain RZ95_14165 PF01654 Cytochrome bd terminal oxidase subunit I RZ95_14170 PF02322 Cytochrome bd terminal oxidase subunit II RZ95_14195 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_14200 PF03358 NADPH-dependent FMN reductase RZ95_14205 PF01758 Sodium Bile acid symporter family RZ95_14215 PF01022 Bacterial regulatory protein, arsR family RZ95_14220 PF03960 ArsC family RZ95_14245 PF13005 zinc-finger binding domain of transposase IS66 RZ95_14245 PF13007 Transposase C of IS166 homeodomain RZ95_14245 PF03050 Transposase IS66 family RZ95_14245 PF13817 IS66 C-terminal element RZ95_14335 PF00589 Phage integrase family RZ95_14340 PF01207 Dihydrouridine synthase (Dus) RZ95_14360 PF00694 Aconitase C-terminal domain RZ95_14360 PF00330 Aconitase family (aconitate hydratase) RZ95_14365 PF01026 TatD related DNase RZ95_14380 PF00009 Elongation factor Tu GTP binding domain RZ95_14380 PF03144 Elongation factor Tu domain 2 RZ95_14380 PF16658 Class II release factor RF3, C-terminal domain RZ95_14390 PF11818 C-terminal domain of tail specific protease (DUF3340) RZ95_14390 PF00595 PDZ domain RZ95_14390 PF17804 Tail specific protease N-terminal domain RZ95_14390 PF03572 Peptidase family S41 RZ95_14395 PF00933 Glycosyl hydrolase family 3 N terminal domain RZ95_14405 PF00561 alpha/beta hydrolase fold RZ95_14410 PF00171 Aldehyde dehydrogenase family RZ95_14415 PF00871 Acetokinase family RZ95_14420 PF07085 DRTGG domain RZ95_14420 PF01515 Phosphate acetyl/butaryl transferase RZ95_14440 PF12833 Helix-turn-helix domain RZ95_14440 PF06445 GyrI-like small molecule binding domain RZ95_14450 PF05683 Fumarase C-terminus RZ95_14450 PF05681 Fumarate hydratase (Fumerase) RZ95_14465 PF10431 C-terminal, D2-small domain, of ClpB protein RZ95_14465 PF06689 ClpX C4-type zinc finger RZ95_14465 PF07724 AAA domain (Cdc48 subfamily) RZ95_14470 PF00574 Clp protease RZ95_14475 PF05697 Bacterial trigger factor protein (TF) RZ95_14475 PF05698 Bacterial trigger factor protein (TF) C-terminus RZ95_14475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RZ95_14485 PF07715 TonB-dependent Receptor Plug Domain RZ95_14485 PF00593 TonB dependent receptor RZ95_14490 PF00593 TonB dependent receptor RZ95_14490 PF07715 TonB-dependent Receptor Plug Domain RZ95_14495 PF18331 PKHD-type hydroxylase C-terminal domain RZ95_14495 PF13640 2OG-Fe(II) oxygenase superfamily RZ95_14500 PF01070 FMN-dependent dehydrogenase RZ95_14505 PF08502 LeuA allosteric (dimerisation) domain RZ95_14505 PF00682 HMGL-like RZ95_14510 PF00561 alpha/beta hydrolase fold RZ95_14515 PF00561 alpha/beta hydrolase fold RZ95_14515 PF07021 Methionine biosynthesis protein MetW RZ95_14530 PF01725 Ham1 family RZ95_14540 PF02416 mttA/Hcf106 family RZ95_14545 PF02416 mttA/Hcf106 family RZ95_14550 PF00902 Sec-independent protein translocase protein (TatC) RZ95_14565 PF01790 Prolipoprotein diacylglyceryl transferase RZ95_14585 PF00303 Thymidylate synthase RZ95_14590 PF00186 Dihydrofolate reductase RZ95_14605 PF01625 Peptide methionine sulfoxide reductase RZ95_14615 PF01618 MotA/TolQ/ExbB proton channel family RZ95_14625 PF00551 Formyl transferase RZ95_14625 PF01842 ACT domain RZ95_14635 PF00171 Aldehyde dehydrogenase family RZ95_14640 PF00830 Ribosomal L28 family RZ95_14645 PF00471 Ribosomal protein L33 RZ95_14650 PF02254 TrkA-N domain RZ95_14650 PF00999 Sodium/hydrogen exchanger family RZ95_14675 PF00580 UvrD/REP helicase N-terminal domain RZ95_14675 PF13361 UvrD-like helicase C-terminal domain RZ95_14680 PF02595 Glycerate kinase family RZ95_14705 PF00293 NUDIX domain RZ95_14710 PF01396 Topoisomerase DNA binding C4 zinc finger RZ95_14710 PF01751 Toprim domain RZ95_14710 PF01131 DNA topoisomerase RZ95_14710 PF08272 Topoisomerase I zinc-ribbon-like RZ95_14725 PF04102 SlyX RZ95_14740 PF03279 Bacterial lipid A biosynthesis acyltransferase RZ95_14750 PF02774 Semialdehyde dehydrogenase, dimerisation domain RZ95_14750 PF01118 Semialdehyde dehydrogenase, NAD binding domain RZ95_14770 PF01416 tRNA pseudouridine synthase RZ95_14780 PF01176 Translation initiation factor 1A / IF-1 RZ95_14795 PF00180 Isocitrate/isopropylmalate dehydrogenase RZ95_14805 PF00694 Aconitase C-terminal domain RZ95_14810 PF00330 Aconitase family (aconitate hydratase) RZ95_14820 PF03466 LysR substrate binding domain RZ95_14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_14840 PF00293 NUDIX domain RZ95_14845 PF00391 PEP-utilising enzyme, mobile domain RZ95_14845 PF05524 PEP-utilising enzyme, N-terminal RZ95_14845 PF01590 GAF domain RZ95_14845 PF02896 PEP-utilising enzyme, TIM barrel domain RZ95_14860 PF01037 Lrp/AsnC ligand binding domain RZ95_14860 PF13404 AsnC-type helix-turn-helix domain RZ95_14870 PF02770 Acyl-CoA dehydrogenase, middle domain RZ95_14870 PF18158 Adaptive response protein AidB N-terminal domain RZ95_14870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RZ95_14885 PF00141 Peroxidase RZ95_14890 PF12706 Beta-lactamase superfamily domain RZ95_14900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_14900 PF03466 LysR substrate binding domain RZ95_14915 PF00849 RNA pseudouridylate synthase RZ95_14915 PF01479 S4 domain RZ95_14920 PF00575 S1 RNA binding domain RZ95_14920 PF10150 Ribonuclease E/G family RZ95_14920 PF12111 Polyribonucleotide phosphorylase C terminal RZ95_14925 PF00501 AMP-binding enzyme RZ95_14925 PF13193 AMP-binding enzyme C-terminal domain RZ95_14950 PF04024 PspC domain RZ95_14965 PF02091 Glycyl-tRNA synthetase alpha subunit RZ95_14970 PF02092 Glycyl-tRNA synthetase beta subunit RZ95_14970 PF05746 DALR anticodon binding domain RZ95_14975 PF02463 RecF/RecN/SMC N terminal domain RZ95_15010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RZ95_15010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RZ95_15025 PF01209 ubiE/COQ5 methyltransferase family RZ95_15050 PF03884 DNA gyrase inhibitor YacG RZ95_15060 PF00753 Metallo-beta-lactamase superfamily RZ95_15065 PF00762 Ferrochelatase RZ95_15075 PF01177 Asp/Glu/Hydantoin racemase RZ95_15095 PF01206 Sulfurtransferase TusA RZ95_15100 PF03471 Transporter associated domain RZ95_15100 PF00571 CBS domain RZ95_15105 PF00795 Carbon-nitrogen hydrolase RZ95_15110 PF01588 Putative tRNA binding domain RZ95_15120 PF07963 Prokaryotic N-terminal methylation motif RZ95_15120 PF08334 Type II secretion system (T2SS), protein G RZ95_15125 PF00482 Type II secretion system (T2SS), protein F RZ95_15130 PF00271 Helicase conserved C-terminal domain RZ95_15130 PF00270 DEAD/DEAH box helicase RZ95_15130 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RZ95_15130 PF17764 3′ DNA-binding domain (3′BD) RZ95_15130 PF18074 Primosomal protein N C-terminal domain RZ95_15135 PF02254 TrkA-N domain RZ95_15135 PF00999 Sodium/hydrogen exchanger family RZ95_15140 PF01430 Hsp33 protein RZ95_15150 PF00226 DnaJ domain RZ95_15150 PF01556 DnaJ C terminal domain RZ95_15160 PF04325 Protein of unknown function (DUF465) RZ95_15165 PF01544 CorA-like Mg2+ transporter protein RZ95_15170 PF00013 KH domain RZ95_15170 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RZ95_15170 PF00575 S1 RNA binding domain RZ95_15170 PF03725 3' exoribonuclease family, domain 2 RZ95_15170 PF01138 3' exoribonuclease family, domain 1 RZ95_15175 PF00312 Ribosomal protein S15 RZ95_15185 PF13538 UvrD-like helicase C-terminal domain RZ95_15195 PF17946 RecC C-terminal domain RZ95_15205 PF03976 Polyphosphate kinase 2 (PPK2) RZ95_15215 PF01209 ubiE/COQ5 methyltransferase family RZ95_15225 PF03109 ABC1 family RZ95_15235 PF01494 FAD binding domain RZ95_15240 PF01502 Phosphoribosyl-AMP cyclohydrolase RZ95_15250 PF02463 RecF/RecN/SMC N terminal domain RZ95_15255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RZ95_15255 PF13244 Domain of unknown function (DUF4040) RZ95_15255 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RZ95_15255 PF00361 Proton-conducting membrane transporter RZ95_15260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RZ95_15265 PF00361 Proton-conducting membrane transporter RZ95_15275 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RZ95_15285 PF02033 Ribosome-binding factor A RZ95_15290 PF11987 Translation-initiation factor 2 RZ95_15290 PF08364 Bacterial translation initiation factor IF-2 associated region RZ95_15290 PF04760 Translation initiation factor IF-2, N-terminal region RZ95_15290 PF00009 Elongation factor Tu GTP binding domain RZ95_15295 PF08529 NusA N-terminal domain RZ95_15295 PF13184 NusA-like KH domain RZ95_15295 PF00575 S1 RNA binding domain RZ95_15300 PF17384 RimP C-terminal SH3 domain RZ95_15300 PF02576 RimP N-terminal domain RZ95_15330 PF03840 Preprotein translocase SecG subunit RZ95_15335 PF00121 Triosephosphate isomerase RZ95_15340 PF00437 Type II/IV secretion system protein RZ95_15340 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RZ95_15345 PF00482 Type II secretion system (T2SS), protein F RZ95_15350 PF01478 Type IV leader peptidase family RZ95_15350 PF06750 Bacterial Peptidase A24 N-terminal domain RZ95_15355 PF01121 Dephospho-CoA kinase RZ95_15365 PF08032 RNA 2'-O ribose methyltransferase substrate binding RZ95_15365 PF00588 SpoU rRNA Methylase family RZ95_15370 PF06865 Pyrimidine/purine nucleoside phosphorylase RZ95_15375 PF02463 RecF/RecN/SMC N terminal domain RZ95_15380 PF02622 Uncharacterized ACR, COG1678 RZ95_15385 PF03652 Holliday junction resolvase RZ95_15390 PF13533 Biotin-lipoyl like RZ95_15400 PF04632 Fusaric acid resistance protein family RZ95_15415 PF00664 ABC transporter transmembrane region RZ95_15415 PF00005 ABC transporter RZ95_15420 PF01066 CDP-alcohol phosphatidyltransferase RZ95_15430 PF08459 UvrC Helix-hairpin-helix N-terminal RZ95_15430 PF01541 GIY-YIG catalytic domain RZ95_15430 PF02151 UvrB/uvrC motif RZ95_15450 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RZ95_15450 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RZ95_15450 PF00378 Enoyl-CoA hydratase/isomerase RZ95_15455 PF02803 Thiolase, C-terminal domain RZ95_15455 PF00108 Thiolase, N-terminal domain RZ95_15465 PF03848 Tellurite resistance protein TehB RZ95_15465 PF09313 Domain of unknown function (DUF1971) RZ95_15495 PF01323 DSBA-like thioredoxin domain RZ95_15520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_15520 PF00183 Hsp90 protein RZ95_15530 PF03922 OmpW family RZ95_15535 PF13726 Na+-H+ antiporter family RZ95_15535 PF03553 Na+/H+ antiporter family RZ95_15560 PF04998 RNA polymerase Rpb1, domain 5 RZ95_15560 PF00623 RNA polymerase Rpb1, domain 2 RZ95_15560 PF04997 RNA polymerase Rpb1, domain 1 RZ95_15560 PF04983 RNA polymerase Rpb1, domain 3 RZ95_15560 PF05000 RNA polymerase Rpb1, domain 4 RZ95_15565 PF04563 RNA polymerase beta subunit RZ95_15565 PF10385 RNA polymerase beta subunit external 1 domain RZ95_15565 PF04561 RNA polymerase Rpb2, domain 2 RZ95_15565 PF04560 RNA polymerase Rpb2, domain 7 RZ95_15565 PF00562 RNA polymerase Rpb2, domain 6 RZ95_15565 PF04565 RNA polymerase Rpb2, domain 3 RZ95_15570 PF00542 Ribosomal protein L7/L12 C-terminal domain RZ95_15570 PF16320 Ribosomal protein L7/L12 dimerisation domain RZ95_15575 PF00466 Ribosomal protein L10 RZ95_15580 PF00687 Ribosomal protein L1p/L10e family RZ95_15585 PF03946 Ribosomal protein L11, N-terminal domain RZ95_15585 PF00298 Ribosomal protein L11, RNA binding domain RZ95_15590 PF02357 Transcription termination factor nusG RZ95_15590 PF00467 KOW motif RZ95_15595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RZ95_15630 PF00425 chorismate binding enzyme RZ95_15630 PF04715 Anthranilate synthase component I, N terminal region RZ95_15635 PF13419 Haloacid dehalogenase-like hydrolase RZ95_15640 PF16697 Inner membrane component of T3SS, cytoplasmic domain RZ95_15645 PF00263 Bacterial type II and III secretion system protein RZ95_15645 PF03958 Bacterial type II/III secretion system short domain RZ95_15650 PF11356 Type II secretion system protein C RZ95_15660 PF00816 H-NS histone family RZ95_15665 PF03061 Thioesterase superfamily RZ95_15685 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RZ95_15685 PF03900 Porphobilinogen deaminase, C-terminal domain RZ95_15690 PF00072 Response regulator receiver domain RZ95_15690 PF04397 LytTr DNA-binding domain RZ95_15695 PF07694 5TMR of 5TMR-LYT RZ95_15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_15695 PF06580 Histidine kinase RZ95_15700 PF00206 Lyase RZ95_15700 PF14698 Argininosuccinate lyase C-terminal RZ95_15705 PF04362 Bacterial Fe(2+) trafficking RZ95_15710 PF01895 PhoU domain RZ95_15715 PF02321 Outer membrane efflux protein RZ95_15725 PF01964 Radical SAM ThiC family RZ95_15725 PF13667 ThiC-associated domain RZ95_15730 PF00293 NUDIX domain RZ95_15735 PF00149 Calcineurin-like phosphoesterase RZ95_15740 PF01258 Prokaryotic dksA/traR C4-type zinc finger RZ95_15745 PF00749 tRNA synthetases class I (E and Q), catalytic domain RZ95_15750 PF01098 Cell cycle protein RZ95_15755 PF08245 Mur ligase middle domain RZ95_15755 PF02875 Mur ligase family, glutamate ligase domain RZ95_15765 PF07664 Ferrous iron transport protein B C terminus RZ95_15765 PF02421 Ferrous iron transport protein B RZ95_15765 PF07670 Nucleoside recognition RZ95_15775 PF02899 Phage integrase, N-terminal SAM-like domain RZ95_15775 PF00589 Phage integrase family RZ95_15780 PF13098 Thioredoxin-like domain RZ95_15780 PF10411 Disulfide bond isomerase protein N-terminus RZ95_15785 PF00742 Homoserine dehydrogenase RZ95_15785 PF01842 ACT domain RZ95_15785 PF03447 Homoserine dehydrogenase, NAD binding domain RZ95_15790 PF00291 Pyridoxal-phosphate dependent enzyme RZ95_15795 PF00768 D-alanyl-D-alanine carboxypeptidase RZ95_15800 PF00072 Response regulator receiver domain RZ95_15800 PF00196 Bacterial regulatory proteins, luxR family RZ95_15805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_15805 PF00512 His Kinase A (phospho-acceptor) domain RZ95_15810 PF00158 Sigma-54 interaction domain RZ95_15810 PF00072 Response regulator receiver domain RZ95_15810 PF02954 Bacterial regulatory protein, Fis family RZ95_15815 PF03572 Peptidase family S41 RZ95_15815 PF00595 PDZ domain RZ95_15820 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RZ95_15820 PF01676 Metalloenzyme superfamily RZ95_15825 PF03739 Lipopolysaccharide export system permease LptF/LptG RZ95_15830 PF03739 Lipopolysaccharide export system permease LptF/LptG RZ95_15835 PF00883 Cytosol aminopeptidase family, catalytic domain RZ95_15835 PF02789 Cytosol aminopeptidase family, N-terminal domain RZ95_15850 PF09335 SNARE associated Golgi protein RZ95_15855 PF00677 Lumazine binding domain RZ95_15865 PF01872 RibD C-terminal domain RZ95_15865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RZ95_15870 PF03477 ATP cone domain RZ95_15875 PF00909 Ammonium Transporter Family RZ95_15880 PF00543 Nitrogen regulatory protein P-II RZ95_15940 PF02421 Ferrous iron transport protein B RZ95_15940 PF07664 Ferrous iron transport protein B C terminus RZ95_15940 PF07670 Nucleoside recognition RZ95_15990 PF00665 Integrase core domain RZ95_16020 PF03573 outer membrane porin, OprD family RZ95_16025 PF00719 Inorganic pyrophosphatase RZ95_16040 PF13193 AMP-binding enzyme C-terminal domain RZ95_16040 PF00501 AMP-binding enzyme RZ95_16045 PF03989 DNA gyrase C-terminal domain, beta-propeller RZ95_16045 PF00521 DNA gyrase/topoisomerase IV, subunit A RZ95_16055 PF07690 Major Facilitator Superfamily RZ95_16060 PF03458 UPF0126 domain RZ95_16065 PF02810 SEC-C motif RZ95_16070 PF03471 Transporter associated domain RZ95_16070 PF03741 Integral membrane protein TerC family RZ95_16075 PF03641 Possible lysine decarboxylase RZ95_16090 PF07690 Major Facilitator Superfamily RZ95_16100 PF11798 IMS family HHH motif RZ95_16100 PF11799 impB/mucB/samB family C-terminal domain RZ95_16100 PF00817 impB/mucB/samB family RZ95_16115 PF08497 Radical SAM N-terminal RZ95_16115 PF11842 Domain of unknown function (DUF3362) RZ95_16115 PF04055 Radical SAM superfamily RZ95_16125 PF01546 Peptidase family M20/M25/M40 RZ95_16125 PF07687 Peptidase dimerisation domain RZ95_16165 PF01327 Polypeptide deformylase RZ95_16175 PF17782 DprA winged helix domain RZ95_16175 PF02481 DNA recombination-mediator protein A RZ95_16180 PF01300 Telomere recombination RZ95_16185 PF00892 EamA-like transporter family RZ95_16195 PF00255 Glutathione peroxidase RZ95_16225 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RZ95_16230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RZ95_16230 PF02874 ATP synthase alpha/beta family, beta-barrel domain RZ95_16235 PF00231 ATP synthase RZ95_16240 PF00306 ATP synthase alpha/beta chain, C terminal domain RZ95_16240 PF02874 ATP synthase alpha/beta family, beta-barrel domain RZ95_16240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RZ95_16245 PF00213 ATP synthase delta (OSCP) subunit RZ95_16250 PF00430 ATP synthase B/B' CF(0) RZ95_16255 PF00137 ATP synthase subunit C RZ95_16260 PF00119 ATP synthase A chain RZ95_16280 PF00005 ABC transporter RZ95_16285 PF00950 ABC 3 transport family RZ95_16300 PF04261 Dyp-type peroxidase family RZ95_16315 PF00877 NlpC/P60 family RZ95_16315 PF01476 LysM domain RZ95_16320 PF16671 Actin cross-linking domain RZ95_16320 PF04717 Type VI secretion system, phage-baseplate injector RZ95_16325 PF03949 Malic enzyme, NAD binding domain RZ95_16325 PF00390 Malic enzyme, N-terminal domain RZ95_16340 PF00750 tRNA synthetases class I (R) RZ95_16340 PF05746 DALR anticodon binding domain RZ95_16340 PF03485 Arginyl tRNA synthetase N terminal domain RZ95_16365 PF05726 Pirin C-terminal cupin domain RZ95_16365 PF02678 Pirin RZ95_16375 PF00117 Glutamine amidotransferase class-I RZ95_16375 PF02540 NAD synthase RZ95_16375 PF00958 GMP synthase C terminal domain RZ95_16390 PF09335 SNARE associated Golgi protein RZ95_16405 PF13614 AAA domain RZ95_16415 PF01722 BolA-like protein RZ95_16455 PF01527 Transposase RZ95_16460 PF00271 Helicase conserved C-terminal domain RZ95_16460 PF12419 SNF2 Helicase protein RZ95_16460 PF00176 SNF2 family N-terminal domain RZ95_16465 PF02378 Phosphotransferase system, EIIC RZ95_16465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RZ95_16470 PF00294 pfkB family carbohydrate kinase RZ95_16475 PF02896 PEP-utilising enzyme, TIM barrel domain RZ95_16475 PF00391 PEP-utilising enzyme, mobile domain RZ95_16475 PF05524 PEP-utilising enzyme, N-terminal RZ95_16475 PF00381 PTS HPr component phosphorylation site RZ95_16475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RZ95_16480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_16480 PF03466 LysR substrate binding domain RZ95_16485 PF02677 Epoxyqueuosine reductase QueH RZ95_16495 PF00925 GTP cyclohydrolase II RZ95_16495 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RZ95_16500 PF00885 6,7-dimethyl-8-ribityllumazine synthase RZ95_16505 PF01029 NusB family RZ95_16510 PF02769 AIR synthase related protein, C-terminal domain RZ95_16510 PF00586 AIR synthase related protein, N-terminal domain RZ95_16515 PF04608 Phosphatidylglycerophosphatase A RZ95_16520 PF12804 MobA-like NTP transferase domain RZ95_16520 PF14602 Hexapeptide repeat of succinyl-transferase RZ95_16520 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_16525 PF01380 SIS domain RZ95_16530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RZ95_16530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RZ95_16530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RZ95_16530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RZ95_16535 PF14052 Capsule assembly protein Wzi RZ95_16540 PF16363 GDP-mannose 4,6 dehydratase RZ95_16545 PF00342 Phosphoglucose isomerase RZ95_16550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RZ95_16550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RZ95_16550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RZ95_16555 PF00483 Nucleotidyl transferase RZ95_16560 PF02397 Bacterial sugar transferase RZ95_16565 PF13477 Glycosyl transferase 4-like RZ95_16565 PF00534 Glycosyl transferases group 1 RZ95_16570 PF00534 Glycosyl transferases group 1 RZ95_16570 PF13439 Glycosyltransferase Family 4 RZ95_16580 PF13439 Glycosyltransferase Family 4 RZ95_16580 PF00534 Glycosyl transferases group 1 RZ95_16600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RZ95_16605 PF00483 Nucleotidyl transferase RZ95_16610 PF16363 GDP-mannose 4,6 dehydratase RZ95_16615 PF02719 Polysaccharide biosynthesis protein RZ95_16620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RZ95_16625 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_16625 PF14602 Hexapeptide repeat of succinyl-transferase RZ95_16625 PF17836 PglD N-terminal domain RZ95_16630 PF02397 Bacterial sugar transferase RZ95_16635 PF12804 MobA-like NTP transferase domain RZ95_16635 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_16635 PF14602 Hexapeptide repeat of succinyl-transferase RZ95_16640 PF13477 Glycosyl transferase 4-like RZ95_16640 PF00534 Glycosyl transferases group 1 RZ95_16645 PF00534 Glycosyl transferases group 1 RZ95_16645 PF13439 Glycosyltransferase Family 4 RZ95_16650 PF13439 Glycosyltransferase Family 4 RZ95_16650 PF00534 Glycosyl transferases group 1 RZ95_16655 PF00132 Bacterial transferase hexapeptide (six repeats) RZ95_16670 PF01370 NAD dependent epimerase/dehydratase family RZ95_16675 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RZ95_16675 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RZ95_16675 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RZ95_16680 PF18412 Outer-membrane lipoprotein Wza C-terminal domain RZ95_16680 PF10531 SLBB domain RZ95_16680 PF02563 Polysaccharide biosynthesis/export protein RZ95_16685 PF01451 Low molecular weight phosphotyrosine protein phosphatase RZ95_16690 PF13614 AAA domain RZ95_16690 PF02706 Chain length determinant protein RZ95_16690 PF13807 G-rich domain on putative tyrosine kinase RZ95_16695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RZ95_16695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RZ95_16700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RZ95_16700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RZ95_16705 PF03023 Lipid II flippase MurJ RZ95_16710 PF01510 N-acetylmuramoyl-L-alanine amidase RZ95_16715 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RZ95_16715 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RZ95_16720 PF01138 3' exoribonuclease family, domain 1 RZ95_16720 PF03725 3' exoribonuclease family, domain 2 RZ95_16725 PF00440 Bacterial regulatory proteins, tetR family RZ95_16730 PF04932 O-Antigen ligase RZ95_16730 PF11846 Virulence factor membrane-bound polymerase, C-terminal RZ95_16730 PF15864 Protein glycosylation ligase RZ95_16735 PF01323 DSBA-like thioredoxin domain RZ95_16745 PF13419 Haloacid dehalogenase-like hydrolase RZ95_16750 PF00106 short chain dehydrogenase RZ95_16770 PF00696 Amino acid kinase family RZ95_16770 PF00583 Acetyltransferase (GNAT) family RZ95_16775 PF09084 NMT1/THI5 like RZ95_16780 PF09084 NMT1/THI5 like RZ95_16785 PF00296 Luciferase-like monooxygenase RZ95_16790 PF00528 Binding-protein-dependent transport system inner membrane component RZ95_16795 PF00005 ABC transporter RZ95_16800 PF00440 Bacterial regulatory proteins, tetR family RZ95_16800 PF08362 YcdC-like protein, C-terminal region RZ95_16815 PF06574 FAD synthetase RZ95_16815 PF01687 Riboflavin kinase RZ95_16820 PF06827 Zinc finger found in FPG and IleRS RZ95_16820 PF08264 Anticodon-binding domain of tRNA RZ95_16820 PF00133 tRNA synthetases class I (I, L, M and V) RZ95_16825 PF01252 Signal peptidase (SPase) II RZ95_16830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RZ95_16855 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RZ95_16855 PF01348 Type II intron maturase RZ95_16890 PF00579 tRNA synthetases class I (W and Y) RZ95_16895 PF03702 Anhydro-N-acetylmuramic acid kinase RZ95_16900 PF13406 Transglycosylase SLT domain RZ95_16905 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RZ95_16905 PF02222 ATP-grasp domain RZ95_16910 PF00731 AIR carboxylase RZ95_16920 PF01225 Mur ligase family, catalytic domain RZ95_16920 PF02875 Mur ligase family, glutamate ligase domain RZ95_16920 PF08245 Mur ligase middle domain RZ95_16950 PF03741 Integral membrane protein TerC family RZ95_16960 PF03738 Glutathionylspermidine synthase preATP-grasp RZ95_16970 PF01979 Amidohydrolase family RZ95_16975 PF00156 Phosphoribosyl transferase domain RZ95_16990 PF10411 Disulfide bond isomerase protein N-terminus RZ95_16990 PF13098 Thioredoxin-like domain RZ95_16995 PF01545 Cation efflux family RZ95_17000 PF02583 Metal-sensitive transcriptional repressor RZ95_17005 PF07690 Major Facilitator Superfamily RZ95_17010 PF12631 MnmE helical domain RZ95_17010 PF01926 50S ribosome-binding GTPase RZ95_17010 PF10396 GTP-binding protein TrmE N-terminus RZ95_17015 PF02096 60Kd inner membrane protein RZ95_17015 PF14849 YidC periplasmic domain RZ95_17020 PF01809 Putative membrane protein insertion efficiency factor RZ95_17025 PF00825 Ribonuclease P RZ95_17030 PF00468 Ribosomal protein L34 RZ95_17045 PF01740 STAS domain RZ95_17045 PF00916 Sulfate permease family RZ95_17055 PF01381 Helix-turn-helix RZ95_17060 PF05973 Phage derived protein Gp49-like (DUF891) RZ95_17075 PF13610 DDE domain RZ95_17085 PF13276 HTH-like domain RZ95_17085 PF13333 Integrase core domain RZ95_17085 PF00665 Integrase core domain RZ95_17110 PF00962 Adenosine/AMP deaminase RZ95_17210 PF01636 Phosphotransferase enzyme family RZ95_17215 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase RZ95_17225 PF07690 Major Facilitator Superfamily RZ95_17230 PF00440 Bacterial regulatory proteins, tetR family RZ95_17230 PF02909 Tetracyclin repressor-like, C-terminal domain RZ95_17250 PF01526 Tn3 transposase DDE domain RZ95_17250 PF13700 Domain of unknown function (DUF4158) RZ95_17255 PF00239 Resolvase, N terminal domain RZ95_17255 PF02796 Helix-turn-helix domain of resolvase RZ95_17275 PF01435 Peptidase family M48 RZ95_17470 PF00580 UvrD/REP helicase N-terminal domain RZ95_17470 PF13361 UvrD-like helicase C-terminal domain RZ95_17505 PF13614 AAA domain RZ95_17510 PF02195 ParB-like nuclease domain RZ95_17510 PF17762 HTH domain found in ParB protein RZ95_17530 PF00437 Type II/IV secretion system protein RZ95_17700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RZ95_17715 PF00462 Glutaredoxin RZ95_17720 PF00111 2Fe-2S iron-sulfur cluster binding domain RZ95_17720 PF00175 Oxidoreductase NAD-binding domain RZ95_17720 PF00970 Oxidoreductase FAD-binding domain RZ95_17725 PF00174 Oxidoreductase molybdopterin binding domain RZ95_17750 PF00107 Zinc-binding dehydrogenase RZ95_17750 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_17765 PF02798 Glutathione S-transferase, N-terminal domain RZ95_17765 PF00043 Glutathione S-transferase, C-terminal domain RZ95_17770 PF01625 Peptide methionine sulfoxide reductase RZ95_17775 PF01641 SelR domain RZ95_17790 PF13276 HTH-like domain RZ95_17790 PF00665 Integrase core domain RZ95_17790 PF13333 Integrase core domain RZ95_17800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RZ95_17800 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_17805 PF13737 Transposase DDE domain RZ95_17815 PF00717 Peptidase S24-like RZ95_17820 PF11798 IMS family HHH motif RZ95_17820 PF13438 Domain of unknown function (DUF4113) RZ95_17820 PF11799 impB/mucB/samB family C-terminal domain RZ95_17820 PF00817 impB/mucB/samB family RZ95_17835 PF13495 Phage integrase, N-terminal SAM-like domain RZ95_17835 PF00589 Phage integrase family RZ95_17850 PF00893 Small Multidrug Resistance protein RZ95_17855 PF00809 Pterin binding enzyme RZ95_17875 PF00005 ABC transporter RZ95_17875 PF00664 ABC transporter transmembrane region RZ95_17905 PF00809 Pterin binding enzyme RZ95_17950 PF00665 Integrase core domain RZ95_17950 PF13936 Helix-turn-helix domain RZ95_17955 PF01636 Phosphotransferase enzyme family RZ95_17960 PF13936 Helix-turn-helix domain RZ95_17960 PF00665 Integrase core domain RZ95_17995 PF00313 'Cold-shock' DNA-binding domain RZ95_18035 PF17841 BID domain of Bartonella effector protein (Bep) RZ95_18035 PF02661 Fic/DOC family RZ95_18130 PF18337 RapA N-terminal Tudor like domain RZ95_18130 PF18339 RapA N-terminal Tudor like domain 1 RZ95_18130 PF00271 Helicase conserved C-terminal domain RZ95_18130 PF12137 RNA polymerase recycling family C-terminal RZ95_18130 PF00176 SNF2 family N-terminal domain RZ95_18185 PF00565 Staphylococcal nuclease homologue RZ95_18230 PF12833 Helix-turn-helix domain RZ95_18230 PF02311 AraC-like ligand binding domain RZ95_18235 PF01625 Peptide methionine sulfoxide reductase RZ95_18250 PF00462 Glutaredoxin RZ95_18255 PF01641 SelR domain RZ95_18270 PF00108 Thiolase, N-terminal domain RZ95_18270 PF02803 Thiolase, C-terminal domain RZ95_18275 PF01625 Peptide methionine sulfoxide reductase RZ95_18280 PF00990 Diguanylate cyclase, GGDEF domain RZ95_18280 PF08448 PAS fold RZ95_18305 PF01381 Helix-turn-helix RZ95_18320 PF02384 N-6 DNA Methylase RZ95_18320 PF12161 HsdM N-terminal domain RZ95_18325 PF01420 Type I restriction modification DNA specificity domain RZ95_18340 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RZ95_18340 PF11867 Domain of unknown function (DUF3387) RZ95_18340 PF18766 SWI2/SNF2 ATPase RZ95_18360 PF01555 DNA methylase RZ95_18365 PF04851 Type III restriction enzyme, res subunit RZ95_18400 PF01396 Topoisomerase DNA binding C4 zinc finger RZ95_18400 PF01751 Toprim domain RZ95_18400 PF01131 DNA topoisomerase RZ95_18470 PF02899 Phage integrase, N-terminal SAM-like domain RZ95_18470 PF00589 Phage integrase family RZ95_18495 PF01520 N-acetylmuramoyl-L-alanine amidase RZ95_18495 PF08239 Bacterial SH3 domain RZ95_18515 PF02522 Aminoglycoside 3-N-acetyltransferase RZ95_18555 PF01695 IstB-like ATP binding protein RZ95_18560 PF02796 Helix-turn-helix domain of resolvase RZ95_18560 PF00665 Integrase core domain RZ95_18585 PF13737 Transposase DDE domain RZ95_18595 PF06505 Activator of aromatic catabolism RZ95_18595 PF00158 Sigma-54 interaction domain RZ95_18595 PF02954 Bacterial regulatory protein, Fis family RZ95_18595 PF02830 V4R domain RZ95_18600 PF01557 Fumarylacetoacetate (FAA) hydrolase family RZ95_18605 PF07836 DmpG-like communication domain RZ95_18605 PF00682 HMGL-like RZ95_18610 PF01118 Semialdehyde dehydrogenase, NAD binding domain RZ95_18610 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation RZ95_18615 PF01557 Fumarylacetoacetate (FAA) hydrolase family RZ95_18625 PF00561 alpha/beta hydrolase fold RZ95_18630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RZ95_18635 PF00111 2Fe-2S iron-sulfur cluster binding domain RZ95_18640 PF00111 2Fe-2S iron-sulfur cluster binding domain RZ95_18640 PF00175 Oxidoreductase NAD-binding domain RZ95_18640 PF00970 Oxidoreductase FAD-binding domain RZ95_18650 PF04945 YHS domain RZ95_18650 PF02332 Methane/Phenol/Toluene Hydroxylase RZ95_18655 PF02406 MmoB/DmpM family RZ95_18660 PF02332 Methane/Phenol/Toluene Hydroxylase RZ95_18670 PF00665 Integrase core domain RZ95_18670 PF13276 HTH-like domain RZ95_18670 PF13333 Integrase core domain RZ95_18685 PF13610 DDE domain RZ95_18695 PF03243 Alkylmercury lyase RZ95_18695 PF12324 Helix-turn-helix domain of alkylmercury lyase RZ95_18705 PF00403 Heavy-metal-associated domain RZ95_18705 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_18705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RZ95_18710 PF00403 Heavy-metal-associated domain RZ95_18715 PF02411 MerT mercuric transport protein RZ95_18720 PF13411 MerR HTH family regulatory protein RZ95_18725 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_18725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RZ95_18730 PF02796 Helix-turn-helix domain of resolvase RZ95_18730 PF00239 Resolvase, N terminal domain RZ95_18745 PF09278 MerR, DNA binding RZ95_18745 PF00376 MerR family regulatory protein RZ95_18750 PF02411 MerT mercuric transport protein RZ95_18760 PF03203 MerC mercury resistance protein RZ95_18765 PF07992 Pyridine nucleotide-disulphide oxidoreductase RZ95_18765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RZ95_18765 PF00403 Heavy-metal-associated domain RZ95_18770 PF12324 Helix-turn-helix domain of alkylmercury lyase RZ95_18770 PF03243 Alkylmercury lyase RZ95_18775 PF13411 MerR HTH family regulatory protein RZ95_18795 PF13610 DDE domain RZ95_18810 PF13361 UvrD-like helicase C-terminal domain RZ95_18810 PF00580 UvrD/REP helicase N-terminal domain RZ95_18830 PF03466 LysR substrate binding domain RZ95_18830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_18835 PF07690 Major Facilitator Superfamily RZ95_18840 PF00775 Dioxygenase RZ95_18840 PF04444 Catechol dioxygenase N terminus RZ95_18845 PF01494 FAD binding domain RZ95_18850 PF03466 LysR substrate binding domain RZ95_18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_18855 PF07690 Major Facilitator Superfamily RZ95_18860 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 RZ95_18860 PF13542 Helix-turn-helix domain of transposase family ISL3 RZ95_18860 PF01610 Transposase RZ95_18865 PF00171 Aldehyde dehydrogenase family RZ95_18870 PF00107 Zinc-binding dehydrogenase RZ95_18870 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_18875 PF00107 Zinc-binding dehydrogenase RZ95_18875 PF08240 Alcohol dehydrogenase GroES-like domain RZ95_18880 PF13610 DDE domain RZ95_18890 PF13610 DDE domain RZ95_18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_18895 PF00512 His Kinase A (phospho-acceptor) domain RZ95_18895 PF00989 PAS fold RZ95_18895 PF16736 Single Cache-like RZ95_18900 PF07690 Major Facilitator Superfamily RZ95_18905 PF02321 Outer membrane efflux protein RZ95_18910 PF00873 AcrB/AcrD/AcrF family RZ95_18915 PF00529 HlyD membrane-fusion protein of T1SS RZ95_18915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RZ95_18920 PF00072 Response regulator receiver domain RZ95_18920 PF00486 Transcriptional regulatory protein, C terminal RZ95_18925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RZ95_18925 PF00512 His Kinase A (phospho-acceptor) domain RZ95_18925 PF00672 HAMP domain RZ95_18935 PF02796 Helix-turn-helix domain of resolvase RZ95_18935 PF00239 Resolvase, N terminal domain RZ95_18940 PF01636 Phosphotransferase enzyme family RZ95_19010 PF13936 Helix-turn-helix domain RZ95_19010 PF00665 Integrase core domain RZ95_19035 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RZ95_19035 PF02753 Pili assembly chaperone PapD, C-terminal domain RZ95_19040 PF00577 Outer membrane usher protein RZ95_19040 PF13954 PapC N-terminal domain RZ95_19040 PF13953 PapC C-terminal domain RZ95_19085 PF01381 Helix-turn-helix RZ95_19090 PF05973 Phage derived protein Gp49-like (DUF891) RZ95_19130 PF12833 Helix-turn-helix domain RZ95_19145 PF00905 Penicillin binding protein transpeptidase domain RZ95_19180 PF03389 MobA/MobL family RZ95_19195 PF01051 Initiator Replication protein RZ95_19225 PF02086 D12 class N6 adenine-specific DNA methyltransferase RZ95_19255 PF17841 BID domain of Bartonella effector protein (Bep) RZ95_19255 PF03389 MobA/MobL family RZ95_19255 PF01443 Viral (Superfamily 1) RNA helicase RZ95_19265 PF01051 Initiator Replication protein RZ95_19275 PF13505 Outer membrane protein beta-barrel domain RZ95_19280 PF01926 50S ribosome-binding GTPase RZ95_19285 PF01926 50S ribosome-binding GTPase RZ95_19290 PF00809 Pterin binding enzyme RZ95_19310 PF04221 RelB antitoxin RZ95_19330 PF01051 Initiator Replication protein RZ95_19335 PF03389 MobA/MobL family RZ95_19350 PF00857 Isochorismatase family RZ95_19355 PF12706 Beta-lactamase superfamily domain RZ95_19360 PF01965 DJ-1/PfpI family RZ95_19365 PF04221 RelB antitoxin RZ95_19435 PF01051 Initiator Replication protein RZ95_19445 PF00582 Universal stress protein family RZ95_19450 PF00916 Sulfate permease family RZ95_19450 PF01740 STAS domain RZ95_19530 PF13614 AAA domain RZ95_19540 PF01527 Transposase RZ95_19550 PF13333 Integrase core domain RZ95_19550 PF13276 HTH-like domain RZ95_19550 PF00665 Integrase core domain RZ95_19555 PF13635 Domain of unknown function (DUF4143) RZ95_19555 PF13173 AAA domain RZ95_19615 PF00899 ThiF family RZ95_19615 PF14461 Prokaryotic E2 family B RZ95_19620 PF00899 ThiF family RZ95_19625 PF00005 ABC transporter RZ95_19625 PF17760 UvrA interaction domain RZ95_19625 PF17755 UvrA DNA-binding domain RZ95_19635 PF02796 Helix-turn-helix domain of resolvase RZ95_19635 PF00239 Resolvase, N terminal domain RZ95_19665 PF13737 Transposase DDE domain RZ95_19670 PF01494 FAD binding domain RZ95_19680 PF07690 Major Facilitator Superfamily RZ95_19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RZ95_19685 PF03466 LysR substrate binding domain RZ95_19780 PF01494 FAD binding domain RZ95_19785 PF01614 Bacterial transcriptional regulator RZ95_19785 PF09339 IclR helix-turn-helix domain RZ95_19795 PF00171 Aldehyde dehydrogenase family RZ95_19805 PF00175 Oxidoreductase NAD-binding domain RZ95_19805 PF00111 2Fe-2S iron-sulfur cluster binding domain RZ95_19810 PF00355 Rieske [2Fe-2S] domain RZ95_19820 PF00171 Aldehyde dehydrogenase family RZ95_19830 PF13613 Helix-turn-helix of DDE superfamily endonuclease RZ95_19830 PF13359 DDE superfamily endonuclease RZ95_19845 PF13401 AAA domain RZ95_19845 PF11426 Tn7 transposition regulator TnsC RZ95_19850 PF00665 Integrase core domain RZ95_19855 PF08722 TnsA endonuclease N terminal RZ95_19855 PF08721 TnsA endonuclease C terminal RZ95_19860 PF01527 Transposase RZ95_19895 PF13340 Putative transposase of IS4/5 family (DUF4096) RZ95_19900 PF13361 UvrD-like helicase C-terminal domain RZ95_19900 PF00580 UvrD/REP helicase N-terminal domain RZ95_19915 PF13737 Transposase DDE domain RZ95_19950 PF13356 Arm DNA-binding domain RZ95_19950 PF00589 Phage integrase family RZ95_19955 PF04233 Phage Mu protein F like protein RZ95_19965 PF12762 ISXO2-like transposase domain RZ95_19985 PF00717 Peptidase S24-like RZ95_19985 PF01726 LexA DNA binding domain RZ95_19990 PF13438 Domain of unknown function (DUF4113) RZ95_19990 PF00817 impB/mucB/samB family RZ95_19990 PF11799 impB/mucB/samB family C-terminal domain RZ95_19990 PF11798 IMS family HHH motif