RZ95_00005 SM00382 ATPases associated with a variety of cellular activities RZ95_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain RZ95_00010 SM00480 DNA polymerase III beta subunit RZ95_00020 SM00387 Histidine kinase-like ATPases RZ95_00020 SM00433 TopoisomeraseII RZ95_00030 SM00382 ATPases associated with a variety of cellular activities RZ95_00110 SM01321 RZ95_00110 RZ95_00250 SM00271 DnaJ molecular chaperone homology domain RZ95_00275 SM00345 helix_turn_helix gluconate operon transcriptional repressor RZ95_00280 SM00829 Enoylreductase RZ95_00300 SM00478 endonuclease III RZ95_00325 SM00382 ATPases associated with a variety of cellular activities RZ95_00330 SM01321 RZ95_00330 RZ95_00350 SM00382 ATPases associated with a variety of cellular activities RZ95_00365 SM00062 Bacterial periplasmic substrate-binding proteins RZ95_00385 SM01130 RZ95_00385 RZ95_00445 SM00450 Rhodanese Homology Domain RZ95_00455 SM00387 Histidine kinase-like ATPases RZ95_00455 SM00388 His Kinase A (phosphoacceptor) domain RZ95_00460 SM00448 cheY-homologous receiver domain RZ95_00460 SM00862 Transcriptional regulatory protein, C terminal RZ95_00520 SM00387 Histidine kinase-like ATPases RZ95_00520 SM00433 TopoisomeraseII RZ95_00545 SM00382 ATPases associated with a variety of cellular activities RZ95_00595 SM00267 diguanylate cyclase RZ95_00630 SM00342 helix_turn_helix, arabinose operon control protein RZ95_00645 SM00347 helix_turn_helix multiple antibiotic resistance protein RZ95_00680 SM00842 Cell division protein FtsA RZ95_00685 SM00864 Tubulin/FtsZ family, GTPase domain RZ95_00685 SM00865 Tubulin/FtsZ family, C-terminal domain RZ95_00720 SM00849 Metallo-beta-lactamase superfamily RZ95_00730 SM00116 Domain in cystathionine beta-synthase and other proteins. RZ95_00730 SM01240 RZ95_00730 RZ95_00760 SM00937 RZ95_00760 RZ95_00765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RZ95_00820 SM00421 helix_turn_helix, Lux Regulon RZ95_00820 SM00448 cheY-homologous receiver domain RZ95_00830 SM00387 Histidine kinase-like ATPases RZ95_00830 SM00388 His Kinase A (phosphoacceptor) domain RZ95_00830 SM00448 cheY-homologous receiver domain RZ95_00875 SM00267 diguanylate cyclase RZ95_00925 SM00255 Toll - interleukin 1 - resistance RZ95_00975 SM00448 cheY-homologous receiver domain RZ95_00975 SM00862 Transcriptional regulatory protein, C terminal RZ95_00980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RZ95_00980 SM00387 Histidine kinase-like ATPases RZ95_00980 SM00388 His Kinase A (phosphoacceptor) domain RZ95_00990 SM00746 metallochaperone-like domain RZ95_01045 SM00899 RZ95_01045 RZ95_01055 SM00422 helix_turn_helix, mercury resistance RZ95_01105 SM00903 Flavin reductase like domain RZ95_01215 SM00477 DNA/RNA non-specific endonuclease RZ95_01215 SM00892 DNA/RNA non-specific endonuclease RZ95_01230 SM00342 helix_turn_helix, arabinose operon control protein RZ95_01285 SM00530 Helix-turn-helix XRE-family like proteins RZ95_01295 SM00474 3'-5' exonuclease RZ95_01345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RZ95_01345 SM00387 Histidine kinase-like ATPases RZ95_01345 SM00388 His Kinase A (phosphoacceptor) domain RZ95_01350 SM00448 cheY-homologous receiver domain RZ95_01350 SM00862 Transcriptional regulatory protein, C terminal RZ95_01355 SM00316 Ribosomal protein S1-like RNA-binding domain RZ95_01355 SM00732 Likely ribonuclease with RNase H fold. RZ95_01370 SM00822 RZ95_01370 RZ95_01380 SM00382 ATPases associated with a variety of cellular activities RZ95_01495 SM00965 Secretin and TonB N terminus short domain RZ95_01590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RZ95_01590 SM00954 Region found in RelA / SpoT proteins RZ95_01595 SM01409 RZ95_01595 RZ95_01600 SM00072 Guanylate kinase homologues. RZ95_01795 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_01835 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_01845 SM00861 Transketolase, pyrimidine binding domain RZ95_01855 SM00487 DEAD-like helicases superfamily RZ95_01855 SM00490 helicase superfamily c-terminal domain RZ95_01860 SM00382 ATPases associated with a variety of cellular activities RZ95_01905 SM00487 DEAD-like helicases superfamily RZ95_01905 SM00490 helicase superfamily c-terminal domain RZ95_01925 SM00382 ATPases associated with a variety of cellular activities RZ95_01935 SM00563 Phosphate acyltransferases RZ95_01985 SM01403 RZ95_01985 RZ95_02005 SM01382 RZ95_02005 RZ95_02005 SM01383 RZ95_02005 RZ95_02020 SM00322 K homology RNA-binding domain RZ95_02040 SM01374 RZ95_02040 RZ95_02045 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RZ95_02110 SM00363 S4 RNA-binding domain RZ95_02110 SM01390 RZ95_02110 RZ95_02115 SM00662 RNA polymerases D RZ95_02185 SM00316 Ribosomal protein S1-like RNA-binding domain RZ95_02185 SM00955 RZ95_02185 RZ95_02220 SM00342 helix_turn_helix, arabinose operon control protein RZ95_02245 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RZ95_02245 SM00267 diguanylate cyclase RZ95_02285 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_02320 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RZ95_02410 SM00450 Rhodanese Homology Domain RZ95_02435 SM00481 DNA polymerase alpha chain like domain RZ95_02470 SM00450 Rhodanese Homology Domain RZ95_02480 SM00479 RZ95_02480 RZ95_02590 SM00014 Acid phosphatase homologues RZ95_02600 SM00562 RZ95_02600 RZ95_02605 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_02610 SM00028 Tetratricopeptide repeats RZ95_02635 SM00564 beta-propeller repeat RZ95_02660 SM01323 RZ95_02660 RZ95_02750 SM00387 Histidine kinase-like ATPases RZ95_02750 SM00388 His Kinase A (phosphoacceptor) domain RZ95_02765 SM00984 UDP binding domain RZ95_02875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RZ95_02875 SM00387 Histidine kinase-like ATPases RZ95_02875 SM00388 His Kinase A (phosphoacceptor) domain RZ95_02880 SM00448 cheY-homologous receiver domain RZ95_02880 SM00862 Transcriptional regulatory protein, C terminal RZ95_02950 SM00342 helix_turn_helix, arabinose operon control protein RZ95_02985 SM00849 Metallo-beta-lactamase superfamily RZ95_03000 SM00957 SecA DEAD-like domain RZ95_03000 SM00958 SecA preprotein cross-linking domain RZ95_03045 SM00267 diguanylate cyclase RZ95_03080 SM00960 Roadblock/LC7 domain RZ95_03150 SM00650 Ribosomal RNA adenine dimethylases RZ95_03185 SM00563 Phosphate acyltransferases RZ95_03190 SM00155 Phospholipase D. Active site motifs. RZ95_03240 SM00342 helix_turn_helix, arabinose operon control protein RZ95_03255 SM00564 beta-propeller repeat RZ95_03310 SM00838 Elongation factor G C-terminus RZ95_03330 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RZ95_03330 SM01232 RZ95_03330 RZ95_03350 SM00671 Sel1-like repeats. RZ95_03385 SM00966 SpoVT / AbrB like domain RZ95_03485 SM00382 ATPases associated with a variety of cellular activities RZ95_03500 SM00382 ATPases associated with a variety of cellular activities RZ95_03500 SM00962 SRP54-type protein, GTPase domain RZ95_03500 SM00963 SRP54-type protein, helical bundle domain RZ95_03525 SM00345 helix_turn_helix gluconate operon transcriptional repressor RZ95_03535 SM00771 ZipA, C-terminal domain (FtsZ-binding) RZ95_03540 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RZ95_03540 SM00292 breast cancer carboxy-terminal domain RZ95_03540 SM00532 Ligase N family RZ95_03655 SM00382 ATPases associated with a variety of cellular activities RZ95_03700 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RZ95_03705 SM00822 RZ95_03705 RZ95_03715 SM00257 Lysin motif RZ95_03720 SM00345 helix_turn_helix gluconate operon transcriptional repressor RZ95_03720 SM00895 RZ95_03720 RZ95_03725 SM00796 Allophanate hydrolase subunit 1 RZ95_03725 SM00797 Allophanate hydrolase subunit 2 RZ95_03725 SM00878 Biotin carboxylase C-terminal domain RZ95_03765 SM00448 cheY-homologous receiver domain RZ95_03765 SM00862 Transcriptional regulatory protein, C terminal RZ95_03770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RZ95_03770 SM00387 Histidine kinase-like ATPases RZ95_03770 SM00388 His Kinase A (phosphoacceptor) domain RZ95_03800 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RZ95_03805 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RZ95_03805 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RZ95_03850 SM00357 Cold shock protein domain RZ95_03855 SM00357 Cold shock protein domain RZ95_03870 SM00267 diguanylate cyclase RZ95_03905 SM00822 RZ95_03905 RZ95_03960 SM00014 Acid phosphatase homologues RZ95_04100 SM00450 Rhodanese Homology Domain RZ95_04145 SM01400 RZ95_04145 RZ95_04180 SM00028 Tetratricopeptide repeats RZ95_04190 SM00400 zinc finger RZ95_04190 SM00493 RZ95_04190 RZ95_04290 SM00861 Transketolase, pyrimidine binding domain RZ95_04310 SM00881 CoA binding domain RZ95_04320 SM00244 prohibitin homologues RZ95_04380 SM00851 MGS-like domain RZ95_04380 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RZ95_04385 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RZ95_04400 SM01103 RZ95_04400 RZ95_04410 SM00382 ATPases associated with a variety of cellular activities RZ95_04460 SM00116 Domain in cystathionine beta-synthase and other proteins. RZ95_04460 SM01091 Transporter associated domain RZ95_04490 SM00116 Domain in cystathionine beta-synthase and other proteins. RZ95_04490 SM00924 MgtE intracellular N domain RZ95_04565 SM00829 Enoylreductase RZ95_04610 SM00267 diguanylate cyclase RZ95_04625 SM00463 Small MutS-related domain RZ95_04645 SM01230 RZ95_04645 RZ95_04715 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RZ95_04720 SM00978 RZ95_04720 RZ95_04725 SM00382 ATPases associated with a variety of cellular activities RZ95_04770 SM00344 helix_turn_helix ASNC type RZ95_04780 SM00893 Electron transfer flavoprotein domain RZ95_04785 SM00893 Electron transfer flavoprotein domain RZ95_04795 SM00434 DNA Topoisomerase IV RZ95_04945 SM00382 ATPases associated with a variety of cellular activities RZ95_04955 SM00852 Probable molybdopterin binding domain RZ95_04960 SM00852 Probable molybdopterin binding domain RZ95_04965 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_04995 SM00382 ATPases associated with a variety of cellular activities RZ95_05000 SM00342 helix_turn_helix, arabinose operon control protein RZ95_05020 SM00342 helix_turn_helix, arabinose operon control protein RZ95_05025 SM01007 Class II Aldolase and Adducin N-terminal domain RZ95_05030 SM00345 helix_turn_helix gluconate operon transcriptional repressor RZ95_05045 SM00267 diguanylate cyclase RZ95_05070 SM00479 RZ95_05070 RZ95_05120 SM00422 helix_turn_helix, mercury resistance RZ95_05180 SM00382 ATPases associated with a variety of cellular activities RZ95_05195 SM00387 Histidine kinase-like ATPases RZ95_05195 SM00388 His Kinase A (phosphoacceptor) domain RZ95_05255 SM00830 Chorismate mutase type II RZ95_05350 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RZ95_05355 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RZ95_05375 SM00344 helix_turn_helix ASNC type RZ95_05400 SM00788 Adenylosuccinate synthetase RZ95_05420 SM00100 Cyclic nucleotide-monophosphate binding domain RZ95_05420 SM00419 helix_turn_helix, cAMP Regulatory protein RZ95_05430 SM00382 ATPases associated with a variety of cellular activities RZ95_05430 SM01086 C-terminal, D2-small domain, of ClpB protein RZ95_05440 SM00981 RZ95_05440 RZ95_05475 SM00882 Coenzyme A transferase RZ95_05480 SM00882 Coenzyme A transferase RZ95_05490 SM00878 Biotin carboxylase C-terminal domain RZ95_05520 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_05520 SM00876 Biotin and Thiamin Synthesis associated domain RZ95_05605 SM00357 Cold shock protein domain RZ95_05610 SM00487 DEAD-like helicases superfamily RZ95_05610 SM00490 helicase superfamily c-terminal domain RZ95_05630 SM00855 Phosphoglycerate mutase family RZ95_05710 SM00220 Serine/Threonine protein kinases, catalytic domain RZ95_05735 SM00849 Metallo-beta-lactamase superfamily RZ95_05745 SM00382 ATPases associated with a variety of cellular activities RZ95_05745 SM00487 DEAD-like helicases superfamily RZ95_05745 SM00490 helicase superfamily c-terminal domain RZ95_05745 SM00847 Helicase associated domain (HA2) Add an annotation RZ95_05755 SM00563 Phosphate acyltransferases RZ95_05770 SM01012 RZ95_05770 RZ95_05790 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RZ95_05800 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_05815 SM00840 RZ95_05815 RZ95_05840 SM00855 Phosphoglycerate mutase family RZ95_05850 SM00116 Domain in cystathionine beta-synthase and other proteins. RZ95_05870 SM00382 ATPases associated with a variety of cellular activities RZ95_05905 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RZ95_05905 SM00534 ATPase domain of DNA mismatch repair MUTS family RZ95_05930 SM00481 DNA polymerase alpha chain like domain RZ95_05945 SM00382 ATPases associated with a variety of cellular activities RZ95_05945 SM00930 RZ95_05945 RZ95_05955 SM01209 RZ95_05955 RZ95_05955 SM01210 RZ95_05955 RZ95_05960 SM00798 AICARFT/IMPCHase bienzyme RZ95_05960 SM00851 MGS-like domain RZ95_05995 SM01228 RZ95_05995 RZ95_06020 SM00460 Transglutaminase/protease-like homologues RZ95_06030 SM01034 Sensors of blue-light using FAD RZ95_06035 SM01005 Alanine racemase, C-terminal domain RZ95_06135 SM00937 RZ95_06135 RZ95_06150 SM00062 Bacterial periplasmic substrate-binding proteins RZ95_06170 SM00342 helix_turn_helix, arabinose operon control protein RZ95_06175 SM00822 RZ95_06175 RZ95_06200 SM00905 Dihydroneopterin aldolase RZ95_06275 SM00344 helix_turn_helix ASNC type RZ95_06325 SM00382 ATPases associated with a variety of cellular activities RZ95_06325 SM00448 cheY-homologous receiver domain RZ95_06330 SM00091 PAS domain RZ95_06330 SM00387 Histidine kinase-like ATPases RZ95_06330 SM00388 His Kinase A (phosphoacceptor) domain RZ95_06335 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_06365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RZ95_06375 SM00935 Outer membrane protein (OmpH-like) RZ95_06405 SM00382 ATPases associated with a variety of cellular activities RZ95_06410 SM00363 S4 RNA-binding domain RZ95_06465 SM00530 Helix-turn-helix XRE-family like proteins RZ95_06660 SM00458 Ricin-type beta-trefoil RZ95_06750 SM01192 RZ95_06750 RZ95_06750 SM01193 RZ95_06750 RZ95_06855 SM01264 RZ95_06855 RZ95_06910 SM00859 Semialdehyde dehydrogenase, NAD binding domain RZ95_06925 SM00382 ATPases associated with a variety of cellular activities RZ95_06925 SM01086 C-terminal, D2-small domain, of ClpB protein RZ95_06985 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_06985 SM00876 Biotin and Thiamin Synthesis associated domain RZ95_07020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RZ95_07025 SM00095 Transthyretin RZ95_07105 SM01060 RZ95_07105 RZ95_07120 SM01236 RZ95_07120 RZ95_07205 SM01329 RZ95_07205 RZ95_07220 SM00903 Flavin reductase like domain RZ95_07255 SM00880 RZ95_07255 RZ95_07255 SM01118 RZ95_07255 RZ95_07260 SM01118 RZ95_07260 RZ95_07340 SM00861 Transketolase, pyrimidine binding domain RZ95_07360 SM00867 YceI-like domain RZ95_07430 SM00382 ATPases associated with a variety of cellular activities RZ95_07450 SM00363 S4 RNA-binding domain RZ95_07475 SM00853 MutL C terminal dimerisation domain RZ95_07475 SM01340 RZ95_07475 RZ95_07520 SM00470 ParB-like nuclease domain RZ95_07535 SM00382 ATPases associated with a variety of cellular activities RZ95_07595 SM00986 Uracil DNA glycosylase superfamily RZ95_07595 SM00987 UreE urease accessory protein, C-terminal domain RZ95_07620 SM00316 Ribosomal protein S1-like RNA-binding domain RZ95_07625 SM00411 bacterial (prokaryotic) histone like domain RZ95_07635 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RZ95_07650 SM00342 helix_turn_helix, arabinose operon control protein RZ95_07670 SM00347 helix_turn_helix multiple antibiotic resistance protein RZ95_07680 SM01091 Transporter associated domain RZ95_07775 SM00822 RZ95_07775 RZ95_07795 SM00382 ATPases associated with a variety of cellular activities RZ95_07810 SM00226 Low molecular weight phosphatase family RZ95_07835 SM00421 helix_turn_helix, Lux Regulon RZ95_07835 SM00448 cheY-homologous receiver domain RZ95_07840 SM00387 Histidine kinase-like ATPases RZ95_07845 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. RZ95_07955 SM00344 helix_turn_helix ASNC type RZ95_07970 SM00487 DEAD-like helicases superfamily RZ95_07970 SM00490 helicase superfamily c-terminal domain RZ95_07970 SM00982 RZ95_07970 RZ95_07970 SM01058 CarD-like/TRCF domain RZ95_07980 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RZ95_07995 SM00271 DnaJ molecular chaperone homology domain RZ95_08030 SM00411 bacterial (prokaryotic) histone like domain RZ95_08065 SM01324 RZ95_08065 RZ95_08095 SM00493 RZ95_08095 RZ95_08110 SM00474 3'-5' exonuclease RZ95_08125 SM00382 ATPases associated with a variety of cellular activities RZ95_08140 SM00116 Domain in cystathionine beta-synthase and other proteins. RZ95_08175 SM00382 ATPases associated with a variety of cellular activities RZ95_08175 SM00962 SRP54-type protein, GTPase domain RZ95_08175 SM00963 SRP54-type protein, helical bundle domain RZ95_08275 SM00267 diguanylate cyclase RZ95_08340 SM00382 ATPases associated with a variety of cellular activities RZ95_08380 SM00849 Metallo-beta-lactamase superfamily RZ95_08415 SM00382 ATPases associated with a variety of cellular activities RZ95_08415 SM01086 C-terminal, D2-small domain, of ClpB protein RZ95_08525 SM00530 Helix-turn-helix XRE-family like proteins RZ95_08640 SM01091 Transporter associated domain RZ95_08650 SM00829 Enoylreductase RZ95_08665 SM00382 ATPases associated with a variety of cellular activities RZ95_08715 SM00829 Enoylreductase RZ95_08735 SM00861 Transketolase, pyrimidine binding domain RZ95_08745 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_08755 SM00448 cheY-homologous receiver domain RZ95_08755 SM00862 Transcriptional regulatory protein, C terminal RZ95_08760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RZ95_08760 SM00387 Histidine kinase-like ATPases RZ95_08760 SM00388 His Kinase A (phosphoacceptor) domain RZ95_08805 SM00870 RZ95_08805 RZ95_08855 SM00822 RZ95_08855 RZ95_08885 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RZ95_08925 SM00882 Coenzyme A transferase RZ95_08930 SM00882 Coenzyme A transferase RZ95_08960 SM00878 Biotin carboxylase C-terminal domain RZ95_08970 SM00796 Allophanate hydrolase subunit 1 RZ95_08970 SM00797 Allophanate hydrolase subunit 2 RZ95_08970 SM00878 Biotin carboxylase C-terminal domain RZ95_09015 SM00903 Flavin reductase like domain RZ95_09040 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RZ95_09075 SM00382 ATPases associated with a variety of cellular activities RZ95_09080 SM00342 helix_turn_helix, arabinose operon control protein RZ95_09105 SM00052 Putative diguanylate phosphodiesterase RZ95_09105 SM00267 diguanylate cyclase RZ95_09120 SM00829 Enoylreductase RZ95_09125 SM00155 Phospholipase D. Active site motifs. RZ95_09155 SM00855 Phosphoglycerate mutase family RZ95_09175 SM00318 Staphylococcal nuclease homologues RZ95_09420 SM00954 Region found in RelA / SpoT proteins RZ95_09625 SM01006 Siderophore biosynthesis protein domain RZ95_09655 SM00342 helix_turn_helix, arabinose operon control protein RZ95_09735 SM00563 Phosphate acyltransferases RZ95_09750 SM00344 helix_turn_helix ASNC type RZ95_09785 SM00382 ATPases associated with a variety of cellular activities RZ95_09785 SM00930 RZ95_09785 RZ95_09810 SM00100 Cyclic nucleotide-monophosphate binding domain RZ95_09810 SM00419 helix_turn_helix, cAMP Regulatory protein RZ95_09835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RZ95_09855 SM00342 helix_turn_helix, arabinose operon control protein RZ95_09930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RZ95_09930 SM00091 PAS domain RZ95_09930 SM00267 diguanylate cyclase RZ95_09945 SM00357 Cold shock protein domain RZ95_09955 SM00829 Enoylreductase RZ95_09985 SM00357 Cold shock protein domain RZ95_10035 SM00487 DEAD-like helicases superfamily RZ95_10035 SM00490 helicase superfamily c-terminal domain RZ95_10055 SM00382 ATPases associated with a variety of cellular activities RZ95_10110 SM00382 ATPases associated with a variety of cellular activities RZ95_10150 SM00382 ATPases associated with a variety of cellular activities RZ95_10165 SM00028 Tetratricopeptide repeats RZ95_10410 SM00530 Helix-turn-helix XRE-family like proteins RZ95_10440 SM00460 Transglutaminase/protease-like homologues RZ95_10470 SM00841 Elongation factor P, C-terminal RZ95_10470 SM01185 RZ95_10470 RZ95_10485 SM00052 Putative diguanylate phosphodiesterase RZ95_10485 SM00091 PAS domain RZ95_10530 SM00382 ATPases associated with a variety of cellular activities RZ95_10570 SM00014 Acid phosphatase homologues RZ95_10575 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RZ95_10605 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RZ95_10620 SM00487 DEAD-like helicases superfamily RZ95_10620 SM00490 helicase superfamily c-terminal domain RZ95_10635 SM00267 diguanylate cyclase RZ95_10705 SM00358 Double-stranded RNA binding motif RZ95_10705 SM00535 Ribonuclease III family RZ95_10720 SM00838 Elongation factor G C-terminus RZ95_10780 SM00382 ATPases associated with a variety of cellular activities RZ95_10840 SM00867 YceI-like domain RZ95_10870 SM01211 RZ95_10870 RZ95_10885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RZ95_10890 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RZ95_10895 SM00382 ATPases associated with a variety of cellular activities RZ95_11020 SM00382 ATPases associated with a variety of cellular activities RZ95_11055 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_11085 SM00671 Sel1-like repeats. RZ95_11100 SM00996 S-adenosyl-L-homocysteine hydrolase RZ95_11100 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RZ95_11115 SM00052 Putative diguanylate phosphodiesterase RZ95_11115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RZ95_11115 SM00267 diguanylate cyclase RZ95_11120 SM00919 Malic enzyme, NAD binding domain RZ95_11120 SM01274 RZ95_11120 RZ95_11170 SM00345 helix_turn_helix gluconate operon transcriptional repressor RZ95_11170 SM00895 RZ95_11170 RZ95_11185 SM00267 diguanylate cyclase RZ95_11195 SM00479 RZ95_11195 RZ95_11255 SM00382 ATPases associated with a variety of cellular activities RZ95_11275 SM00257 Lysin motif RZ95_11280 SM00479 RZ95_11280 RZ95_11320 SM00257 Lysin motif RZ95_11365 SM00936 Penicillin-binding protein 5, C-terminal domain RZ95_11425 SM01011 Aminopeptidase P, N-terminal domain RZ95_11485 SM00267 diguanylate cyclase RZ95_11490 SM00342 helix_turn_helix, arabinose operon control protein RZ95_11500 SM00098 Alkaline phosphatase homologues RZ95_11530 SM00878 Biotin carboxylase C-terminal domain RZ95_11535 SM00796 Allophanate hydrolase subunit 1 RZ95_11535 SM00797 Allophanate hydrolase subunit 2 RZ95_11560 SM00746 metallochaperone-like domain RZ95_11565 SM00422 helix_turn_helix, mercury resistance RZ95_11575 SM00382 ATPases associated with a variety of cellular activities RZ95_11575 SM00464 Found in ATP-dependent protease La (LON) RZ95_11605 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RZ95_11615 SM00478 endonuclease III RZ95_11660 SM00563 Phosphate acyltransferases RZ95_11690 SM00883 Chaperonin 10 Kd subunit RZ95_11700 SM00046 Diacylglycerol kinase catalytic domain (presumed) RZ95_11755 SM00829 Enoylreductase RZ95_11860 SM00382 ATPases associated with a variety of cellular activities RZ95_11870 SM00947 Carbonic anhydrase RZ95_11915 SM01018 B12 binding domain RZ95_11945 SM00342 helix_turn_helix, arabinose operon control protein RZ95_12010 SM01322 RZ95_12010 RZ95_12170 SM00073 Histidine Phosphotransfer domain RZ95_12170 SM00260 Two component signalling adaptor domain RZ95_12170 SM00387 Histidine kinase-like ATPases RZ95_12170 SM00448 cheY-homologous receiver domain RZ95_12170 SM01231 RZ95_12170 RZ95_12175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RZ95_12180 SM00260 Two component signalling adaptor domain RZ95_12185 SM00448 cheY-homologous receiver domain RZ95_12190 SM00448 cheY-homologous receiver domain RZ95_12305 SM00849 Metallo-beta-lactamase superfamily RZ95_12390 SM00062 Bacterial periplasmic substrate-binding proteins RZ95_12405 SM00382 ATPases associated with a variety of cellular activities RZ95_12410 SM01057 Eukaryotic-type carbonic anhydrase RZ95_12430 SM00387 Histidine kinase-like ATPases RZ95_12430 SM00388 His Kinase A (phosphoacceptor) domain RZ95_12435 SM00448 cheY-homologous receiver domain RZ95_12435 SM00862 Transcriptional regulatory protein, C terminal RZ95_12465 SM00563 Phosphate acyltransferases RZ95_12480 SM00244 prohibitin homologues RZ95_12520 SM00346 helix_turn_helix isocitrate lyase regulation RZ95_12555 SM00226 Low molecular weight phosphatase family RZ95_12560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RZ95_12580 SM00342 helix_turn_helix, arabinose operon control protein RZ95_12610 SM00316 Ribosomal protein S1-like RNA-binding domain RZ95_12645 SM00845 GatB domain RZ95_12710 SM00882 Coenzyme A transferase RZ95_12715 SM00882 Coenzyme A transferase RZ95_12730 SM00564 beta-propeller repeat RZ95_12740 SM00710 Parallel beta-helix repeats RZ95_12775 SM00998 Adenylosuccinate lyase C-terminus RZ95_12785 SM00882 Coenzyme A transferase RZ95_12790 SM00882 Coenzyme A transferase RZ95_12795 SM00346 helix_turn_helix isocitrate lyase regulation RZ95_12800 SM01005 Alanine racemase, C-terminal domain RZ95_12835 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RZ95_12840 SM00344 helix_turn_helix ASNC type RZ95_12865 SM00345 helix_turn_helix gluconate operon transcriptional repressor RZ95_12895 SM00345 helix_turn_helix gluconate operon transcriptional repressor RZ95_12930 SM00344 helix_turn_helix ASNC type RZ95_12990 SM00052 Putative diguanylate phosphodiesterase RZ95_12990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RZ95_12990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RZ95_12990 SM00091 PAS domain RZ95_12990 SM00267 diguanylate cyclase RZ95_13010 SM00829 Enoylreductase RZ95_13050 SM00829 Enoylreductase RZ95_13060 SM00829 Enoylreductase RZ95_13065 SM00829 Enoylreductase RZ95_13075 SM00822 RZ95_13075 RZ95_13080 SM00829 Enoylreductase RZ95_13135 SM00448 cheY-homologous receiver domain RZ95_13135 SM00862 Transcriptional regulatory protein, C terminal RZ95_13140 SM00387 Histidine kinase-like ATPases RZ95_13140 SM00388 His Kinase A (phosphoacceptor) domain RZ95_13230 SM00487 DEAD-like helicases superfamily RZ95_13280 SM01004 Delta-aminolevulinic acid dehydratase RZ95_13300 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RZ95_13300 SM00267 diguanylate cyclase RZ95_13325 SM00382 ATPases associated with a variety of cellular activities RZ95_13330 SM00382 ATPases associated with a variety of cellular activities RZ95_13365 SM00849 Metallo-beta-lactamase superfamily RZ95_13410 SM00563 Phosphate acyltransferases RZ95_13445 SM00843 RZ95_13445 RZ95_13480 SM00838 Elongation factor G C-terminus RZ95_13480 SM00889 Elongation factor G, domain IV RZ95_13500 SM00825 Beta-ketoacyl synthase RZ95_13525 SM01005 Alanine racemase, C-terminal domain RZ95_13535 SM00344 helix_turn_helix ASNC type RZ95_13735 SM00248 ankyrin repeats RZ95_13785 SM00331 Sigma factor PP2C-like phosphatases RZ95_13810 SM00382 ATPases associated with a variety of cellular activities RZ95_13830 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RZ95_13830 SM00474 3'-5' exonuclease RZ95_13830 SM00475 5'-3' exonuclease RZ95_13830 SM00482 DNA polymerase A domain RZ95_13845 SM00977 TilS substrate C-terminal domain RZ95_13865 SM00357 Cold shock protein domain RZ95_13865 SM00382 ATPases associated with a variety of cellular activities RZ95_13865 SM00959 Rho termination factor, N-terminal domain RZ95_13875 SM00411 bacterial (prokaryotic) histone like domain RZ95_13880 SM00873 B3/4 domain RZ95_13880 SM00874 tRNA synthetase B5 domain RZ95_13880 SM00896 Ferredoxin-fold anticodon binding domain RZ95_13895 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RZ95_13955 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RZ95_14000 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RZ95_14015 SM00954 Region found in RelA / SpoT proteins RZ95_14035 SM00073 Histidine Phosphotransfer domain RZ95_14035 SM00387 Histidine kinase-like ATPases RZ95_14035 SM00388 His Kinase A (phosphoacceptor) domain RZ95_14035 SM00448 cheY-homologous receiver domain RZ95_14085 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RZ95_14085 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RZ95_14110 SM01230 RZ95_14110 RZ95_14115 SM00448 cheY-homologous receiver domain RZ95_14115 SM00862 Transcriptional regulatory protein, C terminal RZ95_14120 SM00387 Histidine kinase-like ATPases RZ95_14120 SM00388 His Kinase A (phosphoacceptor) domain RZ95_14175 SM00530 Helix-turn-helix XRE-family like proteins RZ95_14210 SM00226 Low molecular weight phosphatase family RZ95_14215 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RZ95_14390 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RZ95_14390 SM00245 tail specific protease RZ95_14440 SM00342 helix_turn_helix, arabinose operon control protein RZ95_14465 SM00382 ATPases associated with a variety of cellular activities RZ95_14465 SM00994 ClpX C4-type zinc finger RZ95_14465 SM01086 C-terminal, D2-small domain, of ClpB protein RZ95_14495 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. RZ95_14505 SM00917 LeuA allosteric (dimerisation) domain RZ95_14520 SM00671 Sel1-like repeats. RZ95_14670 SM00360 RNA recognition motif RZ95_14710 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RZ95_14710 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RZ95_14710 SM00493 RZ95_14710 RZ95_14730 SM00382 ATPases associated with a variety of cellular activities RZ95_14750 SM00859 Semialdehyde dehydrogenase, NAD binding domain RZ95_14765 SM00870 RZ95_14765 RZ95_14775 SM00342 helix_turn_helix, arabinose operon control protein RZ95_14780 SM00316 Ribosomal protein S1-like RNA-binding domain RZ95_14795 SM01329 RZ95_14795 RZ95_14845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RZ95_14860 SM00344 helix_turn_helix ASNC type RZ95_14915 SM00363 S4 RNA-binding domain RZ95_14920 SM00316 Ribosomal protein S1-like RNA-binding domain RZ95_14955 SM00116 Domain in cystathionine beta-synthase and other proteins. RZ95_15060 SM00849 Metallo-beta-lactamase superfamily RZ95_15100 SM00116 Domain in cystathionine beta-synthase and other proteins. RZ95_15100 SM01091 Transporter associated domain RZ95_15130 SM00487 DEAD-like helicases superfamily RZ95_15130 SM00490 helicase superfamily c-terminal domain RZ95_15150 SM00271 DnaJ molecular chaperone homology domain RZ95_15170 SM00316 Ribosomal protein S1-like RNA-binding domain RZ95_15170 SM00322 K homology RNA-binding domain RZ95_15175 SM01387 RZ95_15175 RZ95_15295 SM00316 Ribosomal protein S1-like RNA-binding domain RZ95_15365 SM00967 RNA 2'-O ribose methyltransferase substrate binding RZ95_15385 SM00732 Likely ribonuclease with RNase H fold. RZ95_15415 SM00382 ATPases associated with a variety of cellular activities RZ95_15430 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RZ95_15430 SM00465 GIY-YIG type nucleases (URI domain) RZ95_15520 SM00387 Histidine kinase-like ATPases RZ95_15560 SM00663 RNA polymerase I subunit A N-terminus RZ95_15585 SM00649 Ribosomal protein L11/L12 RZ95_15590 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RZ95_15590 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RZ95_15640 SM00240 Forkhead associated domain RZ95_15660 SM00528 Domain in histone-like proteins of HNS family RZ95_15690 SM00448 cheY-homologous receiver domain RZ95_15690 SM00850 LytTr DNA-binding domain RZ95_15770 SM00899 RZ95_15770 RZ95_15800 SM00421 helix_turn_helix, Lux Regulon RZ95_15800 SM00448 cheY-homologous receiver domain RZ95_15805 SM00387 Histidine kinase-like ATPases RZ95_15805 SM00388 His Kinase A (phosphoacceptor) domain RZ95_15810 SM00382 ATPases associated with a variety of cellular activities RZ95_15810 SM00448 cheY-homologous receiver domain RZ95_15815 SM00245 tail specific protease RZ95_15880 SM00938 Nitrogen regulatory protein P-II RZ95_15900 SM00530 Helix-turn-helix XRE-family like proteins RZ95_15935 SM00899 RZ95_15935 RZ95_15945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RZ95_16045 SM00434 DNA Topoisomerase IV RZ95_16070 SM01091 Transporter associated domain RZ95_16095 SM00641 Glycosyl hydrolases family 25 RZ95_16115 SM00729 Elongator protein 3, MiaB family, Radical SAM RZ95_16230 SM00382 ATPases associated with a variety of cellular activities RZ95_16280 SM00382 ATPases associated with a variety of cellular activities RZ95_16315 SM00257 Lysin motif RZ95_16325 SM00919 Malic enzyme, NAD binding domain RZ95_16325 SM01274 RZ95_16325 RZ95_16340 SM00836 DALR anticodon binding domain RZ95_16340 SM01016 Arginyl tRNA synthetase N terminal dom RZ95_16445 SM00530 Helix-turn-helix XRE-family like proteins RZ95_16460 SM00487 DEAD-like helicases superfamily RZ95_16460 SM00490 helicase superfamily c-terminal domain RZ95_16550 SM00984 UDP binding domain RZ95_16675 SM00984 UDP binding domain RZ95_16685 SM00226 Low molecular weight phosphatase family RZ95_16710 SM00644 RZ95_16710 RZ95_16775 SM00062 Bacterial periplasmic substrate-binding proteins RZ95_16780 SM00062 Bacterial periplasmic substrate-binding proteins RZ95_16795 SM00382 ATPases associated with a variety of cellular activities RZ95_16815 SM00904 Riboflavin kinase RZ95_16910 SM01001 AIR carboxylase RZ95_16940 SM01321 RZ95_16940 RZ95_17020 SM01234 RZ95_17020 RZ95_17255 SM00857 Resolvase, N terminal domain RZ95_17345 SM00490 helicase superfamily c-terminal domain RZ95_17510 SM00470 ParB-like nuclease domain RZ95_17750 SM00829 Enoylreductase RZ95_17875 SM00382 ATPases associated with a variety of cellular activities RZ95_17995 SM00357 Cold shock protein domain RZ95_17995 SM00894 Excalibur calcium-binding domain RZ95_18095 SM00528 Domain in histone-like proteins of HNS family RZ95_18130 SM00487 DEAD-like helicases superfamily RZ95_18185 SM00318 Staphylococcal nuclease homologues RZ95_18230 SM00342 helix_turn_helix, arabinose operon control protein RZ95_18280 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RZ95_18280 SM00267 diguanylate cyclase RZ95_18305 SM00530 Helix-turn-helix XRE-family like proteins RZ95_18340 SM00487 DEAD-like helicases superfamily RZ95_18365 SM00487 DEAD-like helicases superfamily RZ95_18400 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RZ95_18400 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RZ95_18400 SM00493 RZ95_18400 RZ95_18495 SM00646 RZ95_18495 RZ95_18555 SM00382 ATPases associated with a variety of cellular activities RZ95_18595 SM00382 ATPases associated with a variety of cellular activities RZ95_18610 SM00859 Semialdehyde dehydrogenase, NAD binding domain RZ95_18700 SM00671 Sel1-like repeats. RZ95_18730 SM00857 Resolvase, N terminal domain RZ95_18745 SM00422 helix_turn_helix, mercury resistance RZ95_18775 SM00422 helix_turn_helix, mercury resistance RZ95_18870 SM00829 Enoylreductase RZ95_18895 SM00387 Histidine kinase-like ATPases RZ95_18920 SM00448 cheY-homologous receiver domain RZ95_18920 SM00862 Transcriptional regulatory protein, C terminal RZ95_18925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RZ95_18925 SM00387 Histidine kinase-like ATPases RZ95_18925 SM00388 His Kinase A (phosphoacceptor) domain RZ95_18935 SM00857 Resolvase, N terminal domain RZ95_18945 SM00382 ATPases associated with a variety of cellular activities RZ95_18950 SM00530 Helix-turn-helix XRE-family like proteins RZ95_19070 SM00530 Helix-turn-helix XRE-family like proteins RZ95_19080 SM00860 SMI1 / KNR4 family RZ95_19130 SM00342 helix_turn_helix, arabinose operon control protein RZ95_19360 SM00342 helix_turn_helix, arabinose operon control protein RZ95_19635 SM00857 Resolvase, N terminal domain RZ95_19785 SM00346 helix_turn_helix isocitrate lyase regulation RZ95_19800 SM00347 helix_turn_helix multiple antibiotic resistance protein RZ95_19845 SM00382 ATPases associated with a variety of cellular activities RZ95_19965 SM01126 RZ95_19965