BVL33_00055	SM00938	Nitrogen regulatory protein P-II
BVL33_00065	SM00382	ATPases associated with a variety of cellular activities
BVL33_00105	SM00434	DNA Topoisomerase IV
BVL33_00125	SM01091	Transporter associated domain
BVL33_00155	SM00641	Glycosyl hydrolases family 25
BVL33_00165	SM00448	cheY-homologous receiver domain
BVL33_00165	SM00862	Transcriptional regulatory protein, C terminal
BVL33_00170	SM00387	Histidine kinase-like ATPases
BVL33_00170	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_00210	SM00422	helix_turn_helix, mercury resistance
BVL33_00305	SM00387	Histidine kinase-like ATPases
BVL33_00305	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_00305	SM00448	cheY-homologous receiver domain
BVL33_00360	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_00380	SM00382	ATPases associated with a variety of cellular activities
BVL33_00430	SM00382	ATPases associated with a variety of cellular activities
BVL33_00490	SM00836	DALR anticodon binding domain
BVL33_00490	SM01016	Arginyl tRNA synthetase N terminal dom
BVL33_00495	SM00919	Malic enzyme, NAD binding domain
BVL33_00495	SM01274	BVL33_00495
BVL33_00605	SM00220	Serine/Threonine protein kinases, catalytic domain
BVL33_00620	SM00327	von Willebrand factor (vWF) type A domain
BVL33_00665	SM00487	DEAD-like helicases superfamily
BVL33_00685	SM00507	HNH nucleases
BVL33_00730	SM00487	DEAD-like helicases superfamily
BVL33_00745	SM00487	DEAD-like helicases superfamily
BVL33_00745	SM00490	helicase superfamily c-terminal domain
BVL33_00780	SM00344	helix_turn_helix ASNC type
BVL33_00820	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_00860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BVL33_00860	SM00895	BVL33_00860
BVL33_00880	SM00984	UDP binding domain
BVL33_00950	SM00226	Low molecular weight phosphatase family
BVL33_00990	SM00829	Enoylreductase
BVL33_01015	SM00984	UDP binding domain
BVL33_01040	SM00644	BVL33_01040
BVL33_01110	SM00062	Bacterial periplasmic substrate-binding proteins
BVL33_01115	SM00062	Bacterial periplasmic substrate-binding proteins
BVL33_01130	SM00382	ATPases associated with a variety of cellular activities
BVL33_01150	SM00904	Riboflavin kinase
BVL33_01260	SM00849	Metallo-beta-lactamase superfamily
BVL33_01265	SM00235	Zinc-dependent metalloprotease
BVL33_01275	SM00235	Zinc-dependent metalloprotease
BVL33_01300	SM01001	AIR carboxylase
BVL33_01325	SM00855	Phosphoglycerate mutase family
BVL33_01405	SM01234	BVL33_01405
BVL33_01420	SM00382	ATPases associated with a variety of cellular activities
BVL33_01420	SM00760	Bacterial dnaA protein helix-turn-helix domain
BVL33_01425	SM00480	DNA polymerase III beta subunit
BVL33_01435	SM00387	Histidine kinase-like ATPases
BVL33_01435	SM00433	TopoisomeraseII
BVL33_01450	SM00382	ATPases associated with a variety of cellular activities
BVL33_01525	SM00248	ankyrin repeats
BVL33_01580	SM00822	BVL33_01580
BVL33_01620	SM00271	DnaJ molecular chaperone homology domain
BVL33_01655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BVL33_01660	SM00829	Enoylreductase
BVL33_01680	SM00478	endonuclease III
BVL33_01680	SM00525	BVL33_01680
BVL33_01710	SM00382	ATPases associated with a variety of cellular activities
BVL33_01735	SM01130	BVL33_01735
BVL33_01745	SM00344	helix_turn_helix ASNC type
BVL33_01820	SM00450	Rhodanese Homology Domain
BVL33_01860	SM00387	Histidine kinase-like ATPases
BVL33_01860	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_01865	SM00448	cheY-homologous receiver domain
BVL33_01865	SM00862	Transcriptional regulatory protein, C terminal
BVL33_01995	SM00387	Histidine kinase-like ATPases
BVL33_01995	SM00433	TopoisomeraseII
BVL33_02025	SM00382	ATPases associated with a variety of cellular activities
BVL33_02070	SM00267	diguanylate cyclase
BVL33_02120	SM00347	helix_turn_helix multiple antibiotic resistance protein
BVL33_02155	SM00842	Cell division protein FtsA
BVL33_02160	SM00864	Tubulin/FtsZ family, GTPase domain
BVL33_02160	SM00865	Tubulin/FtsZ family, C-terminal domain
BVL33_02210	SM00849	Metallo-beta-lactamase superfamily
BVL33_02220	SM00116	Domain in cystathionine beta-synthase and other proteins.
BVL33_02220	SM01240	BVL33_02220
BVL33_02245	SM01126	BVL33_02245
BVL33_02255	SM00937	BVL33_02255
BVL33_02260	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BVL33_02300	SM00344	helix_turn_helix ASNC type
BVL33_02315	SM00421	helix_turn_helix, Lux Regulon
BVL33_02315	SM00448	cheY-homologous receiver domain
BVL33_02330	SM00849	Metallo-beta-lactamase superfamily
BVL33_02340	SM00267	diguanylate cyclase
BVL33_02360	SM00829	Enoylreductase
BVL33_02405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BVL33_02470	SM00477	DNA/RNA non-specific endonuclease
BVL33_02470	SM00892	DNA/RNA non-specific endonuclease
BVL33_02485	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_02530	SM00530	Helix-turn-helix XRE-family like proteins 
BVL33_02545	SM00474	3'-5' exonuclease
BVL33_02590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BVL33_02590	SM00387	Histidine kinase-like ATPases
BVL33_02590	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_02595	SM00448	cheY-homologous receiver domain
BVL33_02595	SM00862	Transcriptional regulatory protein, C terminal
BVL33_02600	SM00316	Ribosomal protein S1-like RNA-binding domain
BVL33_02600	SM00732	Likely ribonuclease with RNase H fold.
BVL33_02620	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_02645	SM00422	helix_turn_helix, mercury resistance
BVL33_02655	SM00822	BVL33_02655
BVL33_02665	SM00382	ATPases associated with a variety of cellular activities
BVL33_02670	SM00671	Sel1-like repeats.
BVL33_02810	SM00842	Cell division protein FtsA
BVL33_02830	SM00965	Secretin and TonB N terminus short domain
BVL33_02925	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BVL33_02925	SM00954	Region found in RelA / SpoT proteins
BVL33_02930	SM01409	BVL33_02930
BVL33_02935	SM00072	Guanylate kinase homologues.
BVL33_03195	SM00116	Domain in cystathionine beta-synthase and other proteins.
BVL33_03240	SM00861	Transketolase, pyrimidine binding domain
BVL33_03250	SM00487	DEAD-like helicases superfamily
BVL33_03250	SM00490	helicase superfamily c-terminal domain
BVL33_03260	SM00382	ATPases associated with a variety of cellular activities
BVL33_03310	SM00487	DEAD-like helicases superfamily
BVL33_03310	SM00490	helicase superfamily c-terminal domain
BVL33_03325	SM00563	Phosphate acyltransferases
BVL33_03375	SM01403	BVL33_03375
BVL33_03395	SM01382	BVL33_03395
BVL33_03395	SM01383	BVL33_03395
BVL33_03410	SM00322	K homology RNA-binding domain
BVL33_03430	SM01374	BVL33_03430
BVL33_03435	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BVL33_03500	SM00363	S4 RNA-binding domain
BVL33_03500	SM01390	BVL33_03500
BVL33_03505	SM00662	RNA polymerases D
BVL33_03600	SM00316	Ribosomal protein S1-like RNA-binding domain
BVL33_03600	SM00955	BVL33_03600
BVL33_03650	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_03715	SM00671	Sel1-like repeats.
BVL33_03730	SM00917	LeuA allosteric (dimerisation) domain
BVL33_03740	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BVL33_03760	SM00382	ATPases associated with a variety of cellular activities
BVL33_03760	SM00994	ClpX C4-type zinc finger
BVL33_03760	SM01086	C-terminal, D2-small domain, of ClpB protein
BVL33_03780	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_03820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BVL33_03820	SM00245	tail specific protease
BVL33_03850	SM00563	Phosphate acyltransferases
BVL33_03855	SM00155	Phospholipase D. Active site motifs.
BVL33_03870	SM00267	diguanylate cyclase
BVL33_03930	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BVL33_03950	SM00450	Rhodanese Homology Domain
BVL33_04000	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_04020	SM00450	Rhodanese Homology Domain
BVL33_04030	SM00479	BVL33_04030
BVL33_04060	SM00382	ATPases associated with a variety of cellular activities
BVL33_04125	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BVL33_04130	SM00226	Low molecular weight phosphatase family
BVL33_04205	SM00382	ATPases associated with a variety of cellular activities
BVL33_04485	SM00487	DEAD-like helicases superfamily
BVL33_04520	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BVL33_04520	SM00267	diguanylate cyclase
BVL33_04550	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_04580	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BVL33_04580	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BVL33_04635	SM00073	Histidine Phosphotransfer domain
BVL33_04635	SM00387	Histidine kinase-like ATPases
BVL33_04635	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_04635	SM00448	cheY-homologous receiver domain
BVL33_04655	SM00954	Region found in RelA / SpoT proteins
BVL33_04670	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BVL33_04720	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BVL33_04780	SM00873	B3/4 domain
BVL33_04780	SM00874	tRNA synthetase B5 domain
BVL33_04780	SM00896	Ferredoxin-fold anticodon binding domain
BVL33_04785	SM00411	bacterial (prokaryotic) histone like domain
BVL33_04795	SM00357	Cold shock protein domain
BVL33_04795	SM00382	ATPases associated with a variety of cellular activities
BVL33_04795	SM00959	Rho termination factor, N-terminal domain
BVL33_04815	SM00977	TilS substrate C-terminal domain
BVL33_04830	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BVL33_04830	SM00474	3'-5' exonuclease
BVL33_04830	SM00475	5'-3' exonuclease
BVL33_04830	SM00482	DNA polymerase A domain
BVL33_04850	SM00382	ATPases associated with a variety of cellular activities
BVL33_04875	SM00331	Sigma factor PP2C-like phosphatases
BVL33_05120	SM01400	BVL33_05120
BVL33_05185	SM00855	Phosphoglycerate mutase family
BVL33_05215	SM00387	Histidine kinase-like ATPases
BVL33_05260	SM00448	cheY-homologous receiver domain
BVL33_05260	SM00862	Transcriptional regulatory protein, C terminal
BVL33_05265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BVL33_05265	SM00387	Histidine kinase-like ATPases
BVL33_05265	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_05300	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BVL33_05305	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BVL33_05305	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BVL33_05350	SM00357	Cold shock protein domain
BVL33_05355	SM00357	Cold shock protein domain
BVL33_05355	SM00894	Excalibur calcium-binding domain
BVL33_05435	SM00849	Metallo-beta-lactamase superfamily
BVL33_05535	SM00382	ATPases associated with a variety of cellular activities
BVL33_05535	SM00962	SRP54-type protein, GTPase domain
BVL33_05535	SM00963	SRP54-type protein, helical bundle domain
BVL33_05560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BVL33_05570	SM00771	ZipA, C-terminal domain (FtsZ-binding)
BVL33_05575	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BVL33_05575	SM00292	breast cancer carboxy-terminal domain
BVL33_05575	SM00532	Ligase N family
BVL33_05685	SM00382	ATPases associated with a variety of cellular activities
BVL33_05690	SM00363	S4 RNA-binding domain
BVL33_05735	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BVL33_05740	SM00822	BVL33_05740
BVL33_05810	SM01400	BVL33_05810
BVL33_05845	SM00028	Tetratricopeptide repeats
BVL33_05855	SM00400	zinc finger
BVL33_05855	SM00493	BVL33_05855
BVL33_05865	SM00363	S4 RNA-binding domain
BVL33_05995	SM00487	DEAD-like helicases superfamily
BVL33_06025	SM00746	metallochaperone-like domain
BVL33_06030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BVL33_06030	SM00387	Histidine kinase-like ATPases
BVL33_06030	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_06035	SM00448	cheY-homologous receiver domain
BVL33_06035	SM00862	Transcriptional regulatory protein, C terminal
BVL33_06145	SM00825	Beta-ketoacyl synthase
BVL33_06165	SM00838	Elongation factor G C-terminus
BVL33_06165	SM00889	Elongation factor G, domain IV
BVL33_06210	SM00843	BVL33_06210
BVL33_06245	SM00563	Phosphate acyltransferases
BVL33_06320	SM00382	ATPases associated with a variety of cellular activities
BVL33_06325	SM00382	ATPases associated with a variety of cellular activities
BVL33_06375	SM00860	SMI1 / KNR4 family
BVL33_06405	SM01004	Delta-aminolevulinic acid dehydratase
BVL33_06430	SM00422	helix_turn_helix, mercury resistance
BVL33_06460	SM01040	BRO family, N-terminal domain
BVL33_06490	SM00382	ATPases associated with a variety of cellular activities
BVL33_06490	SM00404	Protein tyrosine phosphatase, catalytic domain motif
BVL33_06510	SM00344	helix_turn_helix ASNC type
BVL33_06515	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BVL33_06575	SM00382	ATPases associated with a variety of cellular activities
BVL33_06595	SM00062	Bacterial periplasmic substrate-binding proteins
BVL33_06600	SM00382	ATPases associated with a variety of cellular activities
BVL33_06655	SM01018	B12 binding domain
BVL33_06665	SM00978	BVL33_06665
BVL33_06670	SM00382	ATPases associated with a variety of cellular activities
BVL33_06715	SM00893	Electron transfer flavoprotein domain
BVL33_06720	SM00893	Electron transfer flavoprotein domain
BVL33_06730	SM00434	DNA Topoisomerase IV
BVL33_06790	SM00382	ATPases associated with a variety of cellular activities
BVL33_06910	SM00382	ATPases associated with a variety of cellular activities
BVL33_06915	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BVL33_06920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BVL33_06925	SM01211	BVL33_06925
BVL33_06935	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BVL33_07015	SM00382	ATPases associated with a variety of cellular activities
BVL33_07060	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BVL33_07070	SM00838	Elongation factor G C-terminus
BVL33_07085	SM00358	Double-stranded RNA binding motif
BVL33_07085	SM00535	Ribonuclease III family
BVL33_07150	SM00487	DEAD-like helicases superfamily
BVL33_07150	SM00490	helicase superfamily c-terminal domain
BVL33_07165	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BVL33_07185	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BVL33_07260	SM01091	Transporter associated domain
BVL33_07285	SM00840	BVL33_07285
BVL33_07290	SM00116	Domain in cystathionine beta-synthase and other proteins.
BVL33_07310	SM00382	ATPases associated with a variety of cellular activities
BVL33_07330	SM00382	ATPases associated with a variety of cellular activities
BVL33_07370	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BVL33_07370	SM00534	ATPase domain of DNA mismatch repair MUTS family
BVL33_07390	SM00382	ATPases associated with a variety of cellular activities
BVL33_07400	SM01091	Transporter associated domain
BVL33_07425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BVL33_07425	SM00387	Histidine kinase-like ATPases
BVL33_07425	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_07430	SM00448	cheY-homologous receiver domain
BVL33_07430	SM00862	Transcriptional regulatory protein, C terminal
BVL33_07440	SM00095	Transthyretin
BVL33_07465	SM01126	BVL33_07465
BVL33_07540	SM00220	Serine/Threonine protein kinases, catalytic domain
BVL33_07565	SM01126	BVL33_07565
BVL33_07635	SM00936	Penicillin-binding protein 5, C-terminal domain 
BVL33_07655	SM00257	Lysin motif
BVL33_07690	SM00052	Putative diguanylate phosphodiesterase
BVL33_07705	SM00841	Elongation factor P, C-terminal
BVL33_07705	SM01185	BVL33_07705
BVL33_07730	SM00460	Transglutaminase/protease-like homologues
BVL33_07785	SM00530	Helix-turn-helix XRE-family like proteins 
BVL33_07805	SM00778	Zinc-binding domain of primase-helicase
BVL33_07835	SM00507	HNH nucleases
BVL33_08140	SM00382	ATPases associated with a variety of cellular activities
BVL33_08145	SM00849	Metallo-beta-lactamase superfamily
BVL33_08190	SM00387	Histidine kinase-like ATPases
BVL33_08190	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_08195	SM00448	cheY-homologous receiver domain
BVL33_08195	SM00862	Transcriptional regulatory protein, C terminal
BVL33_08240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BVL33_08240	SM00895	BVL33_08240
BVL33_08270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BVL33_08270	SM00866	BVL33_08270
BVL33_08305	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BVL33_08320	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_08325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BVL33_08385	SM00796	Allophanate hydrolase subunit 1
BVL33_08385	SM00797	Allophanate hydrolase subunit 2
BVL33_08390	SM00878	Biotin carboxylase C-terminal domain
BVL33_08400	SM00100	Cyclic nucleotide-monophosphate binding domain
BVL33_08400	SM00419	helix_turn_helix, cAMP Regulatory protein
BVL33_08415	SM00382	ATPases associated with a variety of cellular activities
BVL33_08415	SM01086	C-terminal, D2-small domain, of ClpB protein
BVL33_08425	SM00981	BVL33_08425
BVL33_08490	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_08515	SM00382	ATPases associated with a variety of cellular activities
BVL33_08515	SM00487	DEAD-like helicases superfamily
BVL33_08515	SM00490	helicase superfamily c-terminal domain
BVL33_08515	SM00847	Helicase associated domain (HA2)  Add an annotation
BVL33_08530	SM00729	Elongator protein 3, MiaB family, Radical SAM
BVL33_08580	SM00382	ATPases associated with a variety of cellular activities
BVL33_08615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BVL33_08615	SM00895	BVL33_08615
BVL33_08650	SM00829	Enoylreductase
BVL33_08655	SM00822	BVL33_08655
BVL33_08665	SM00829	Enoylreductase
BVL33_08670	SM00829	Enoylreductase
BVL33_08680	SM00829	Enoylreductase
BVL33_08785	SM00729	Elongator protein 3, MiaB family, Radical SAM
BVL33_08785	SM00876	Biotin and Thiamin Synthesis associated domain
BVL33_08815	SM00357	Cold shock protein domain
BVL33_08855	SM00861	Transketolase, pyrimidine binding domain
BVL33_08865	SM00867	YceI-like domain 
BVL33_08910	SM00344	helix_turn_helix ASNC type
BVL33_08925	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_08935	SM00382	ATPases associated with a variety of cellular activities
BVL33_08975	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BVL33_08995	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BVL33_09000	SM00382	ATPases associated with a variety of cellular activities
BVL33_09015	SM00226	Low molecular weight phosphatase family
BVL33_09105	SM00878	Biotin carboxylase C-terminal domain
BVL33_09125	SM00448	cheY-homologous receiver domain
BVL33_09125	SM01012	BVL33_09125
BVL33_09145	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BVL33_09165	SM00729	Elongator protein 3, MiaB family, Radical SAM
BVL33_09180	SM00852	Probable molybdopterin binding domain
BVL33_09185	SM00852	Probable molybdopterin binding domain
BVL33_09260	SM00382	ATPases associated with a variety of cellular activities
BVL33_09260	SM00448	cheY-homologous receiver domain
BVL33_09265	SM00091	PAS domain
BVL33_09265	SM00387	Histidine kinase-like ATPases
BVL33_09265	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_09270	SM00729	Elongator protein 3, MiaB family, Radical SAM
BVL33_09300	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BVL33_09310	SM00935	Outer membrane protein (OmpH-like)
BVL33_09330	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_09385	SM01006	Siderophore biosynthesis protein domain
BVL33_09430	SM00855	Phosphoglycerate mutase family
BVL33_09510	SM01324	BVL33_09510
BVL33_09535	SM00493	BVL33_09535
BVL33_09565	SM00382	ATPases associated with a variety of cellular activities
BVL33_09590	SM00267	diguanylate cyclase
BVL33_09610	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_09640	SM00530	Helix-turn-helix XRE-family like proteins 
BVL33_09650	SM01126	BVL33_09650
BVL33_09655	SM00487	DEAD-like helicases superfamily
BVL33_09655	SM00490	helicase superfamily c-terminal domain
BVL33_09695	SM01126	BVL33_09695
BVL33_09700	SM00248	ankyrin repeats
BVL33_09730	SM00530	Helix-turn-helix XRE-family like proteins 
BVL33_09750	SM00903	Flavin reductase like domain
BVL33_09780	SM00882	Coenzyme A transferase
BVL33_09785	SM00882	Coenzyme A transferase
BVL33_09835	SM00878	Biotin carboxylase C-terminal domain
BVL33_09855	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_09875	SM00382	ATPases associated with a variety of cellular activities
BVL33_09890	SM00796	Allophanate hydrolase subunit 1
BVL33_09890	SM00797	Allophanate hydrolase subunit 2
BVL33_09890	SM00878	Biotin carboxylase C-terminal domain
BVL33_09905	SM00344	helix_turn_helix ASNC type
BVL33_09945	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BVL33_09985	SM00882	Coenzyme A transferase
BVL33_09990	SM00882	Coenzyme A transferase
BVL33_10045	SM00829	Enoylreductase
BVL33_10050	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_10060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BVL33_10060	SM00895	BVL33_10060
BVL33_10065	SM00796	Allophanate hydrolase subunit 1
BVL33_10065	SM00797	Allophanate hydrolase subunit 2
BVL33_10065	SM00878	Biotin carboxylase C-terminal domain
BVL33_10090	SM00849	Metallo-beta-lactamase superfamily
BVL33_10120	SM01192	BVL33_10120
BVL33_10120	SM01193	BVL33_10120
BVL33_10195	SM00382	ATPases associated with a variety of cellular activities
BVL33_10195	SM01086	C-terminal, D2-small domain, of ClpB protein
BVL33_10210	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BVL33_10255	SM01264	BVL33_10255
BVL33_10320	SM00382	ATPases associated with a variety of cellular activities
BVL33_10320	SM00962	SRP54-type protein, GTPase domain
BVL33_10320	SM00963	SRP54-type protein, helical bundle domain
BVL33_10345	SM00116	Domain in cystathionine beta-synthase and other proteins.
BVL33_10400	SM00347	helix_turn_helix multiple antibiotic resistance protein
BVL33_10420	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_10435	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BVL33_10450	SM00411	bacterial (prokaryotic) histone like domain
BVL33_10455	SM00316	Ribosomal protein S1-like RNA-binding domain
BVL33_10480	SM00986	Uracil DNA glycosylase superfamily
BVL33_10480	SM00987	UreE urease accessory protein, C-terminal domain 
BVL33_10540	SM00382	ATPases associated with a variety of cellular activities
BVL33_10555	SM00470	ParB-like nuclease domain
BVL33_10595	SM00487	DEAD-like helicases superfamily
BVL33_10595	SM00490	helicase superfamily c-terminal domain
BVL33_10600	SM00357	Cold shock protein domain
BVL33_10670	SM00382	ATPases associated with a variety of cellular activities
BVL33_10720	SM00830	Chorismate mutase type II
BVL33_10775	SM00028	Tetratricopeptide repeats
BVL33_10790	SM00387	Histidine kinase-like ATPases
BVL33_10790	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_10805	SM00382	ATPases associated with a variety of cellular activities
BVL33_10835	SM01236	BVL33_10835
BVL33_10940	SM00905	Dihydroneopterin aldolase
BVL33_10965	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_10970	SM00903	Flavin reductase like domain
BVL33_10980	SM00822	BVL33_10980
BVL33_10985	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_11000	SM00937	BVL33_11000
BVL33_11045	SM00479	BVL33_11045
BVL33_11070	SM00382	ATPases associated with a variety of cellular activities
BVL33_11180	SM00952	BVL33_11180
BVL33_11195	SM00487	DEAD-like helicases superfamily
BVL33_11195	SM00490	helicase superfamily c-terminal domain
BVL33_11300	SM00530	Helix-turn-helix XRE-family like proteins 
BVL33_11380	SM00357	Cold shock protein domain
BVL33_11395	SM00563	Phosphate acyltransferases
BVL33_11405	SM00344	helix_turn_helix ASNC type
BVL33_11435	SM00382	ATPases associated with a variety of cellular activities
BVL33_11460	SM00100	Cyclic nucleotide-monophosphate binding domain
BVL33_11460	SM00419	helix_turn_helix, cAMP Regulatory protein
BVL33_11475	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BVL33_11490	SM00344	helix_turn_helix ASNC type
BVL33_11520	SM00671	Sel1-like repeats.
BVL33_11525	SM00870	BVL33_11525
BVL33_11530	SM00481	DNA polymerase alpha chain like domain
BVL33_11625	SM00855	Phosphoglycerate mutase family
BVL33_11700	SM00822	BVL33_11700
BVL33_11755	SM00363	S4 RNA-binding domain
BVL33_11760	SM00382	ATPases associated with a variety of cellular activities
BVL33_11785	SM00411	bacterial (prokaryotic) histone like domain
BVL33_11820	SM00271	DnaJ molecular chaperone homology domain
BVL33_11835	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
BVL33_11845	SM00487	DEAD-like helicases superfamily
BVL33_11845	SM00490	helicase superfamily c-terminal domain
BVL33_11845	SM00982	BVL33_11845
BVL33_11845	SM01058	CarD-like/TRCF domain
BVL33_11970	SM00382	ATPases associated with a variety of cellular activities
BVL33_12035	SM00853	MutL C terminal dimerisation domain
BVL33_12035	SM01340	BVL33_12035
BVL33_12065	SM00363	S4 RNA-binding domain
BVL33_12155	SM01005	Alanine racemase, C-terminal domain
BVL33_12165	SM00460	Transglutaminase/protease-like homologues
BVL33_12185	SM00788	Adenylosuccinate synthetase
BVL33_12200	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BVL33_12205	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BVL33_12270	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_12285	SM01228	BVL33_12285
BVL33_12310	SM00798	AICARFT/IMPCHase bienzyme
BVL33_12310	SM00851	MGS-like domain
BVL33_12315	SM01209	BVL33_12315
BVL33_12315	SM01210	BVL33_12315
BVL33_12325	SM00382	ATPases associated with a variety of cellular activities
BVL33_12325	SM00930	BVL33_12325
BVL33_12345	SM00849	Metallo-beta-lactamase superfamily
BVL33_12355	SM00996	S-adenosyl-L-homocysteine hydrolase
BVL33_12355	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BVL33_12370	SM00052	Putative diguanylate phosphodiesterase
BVL33_12370	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BVL33_12370	SM00091	PAS domain
BVL33_12370	SM00267	diguanylate cyclase
BVL33_12375	SM00919	Malic enzyme, NAD binding domain
BVL33_12375	SM01274	BVL33_12375
BVL33_12415	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BVL33_12475	SM01230	BVL33_12475
BVL33_12510	SM00463	Small MutS-related domain
BVL33_12550	SM00267	diguanylate cyclase
BVL33_12560	SM00479	BVL33_12560
BVL33_12580	SM00382	ATPases associated with a variety of cellular activities
BVL33_12600	SM00257	Lysin motif
BVL33_12605	SM00479	BVL33_12605
BVL33_12655	SM00422	helix_turn_helix, mercury resistance
BVL33_12675	SM01011	Aminopeptidase P, N-terminal domain
BVL33_12710	SM00327	von Willebrand factor (vWF) type A domain
BVL33_12720	SM00382	ATPases associated with a variety of cellular activities
BVL33_12725	SM00567	E-Z type HEAT repeats
BVL33_12775	SM00382	ATPases associated with a variety of cellular activities
BVL33_12775	SM00464	Found in ATP-dependent protease La (LON)
BVL33_12795	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BVL33_12805	SM00478	endonuclease III
BVL33_12805	SM00525	BVL33_12805
BVL33_12870	SM00382	ATPases associated with a variety of cellular activities
BVL33_12945	SM00487	DEAD-like helicases superfamily
BVL33_12945	SM00490	helicase superfamily c-terminal domain
BVL33_13005	SM00880	BVL33_13005
BVL33_13005	SM01118	BVL33_13005
BVL33_13035	SM01329	BVL33_13035
BVL33_13125	SM00382	ATPases associated with a variety of cellular activities
BVL33_13135	SM00947	Carbonic anhydrase
BVL33_13170	SM00421	helix_turn_helix, Lux Regulon
BVL33_13200	SM00883	Chaperonin 10 Kd subunit
BVL33_13210	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BVL33_13225	SM00420	helix_turn_helix, Deoxyribose operon repressor
BVL33_13225	SM01134	BVL33_13225
BVL33_13300	SM01322	BVL33_13300
BVL33_13380	SM00116	Domain in cystathionine beta-synthase and other proteins.
BVL33_13380	SM00924	MgtE intracellular N domain
BVL33_13420	SM00327	von Willebrand factor (vWF) type A domain
BVL33_13440	SM00382	ATPases associated with a variety of cellular activities
BVL33_13450	SM01103	BVL33_13450
BVL33_13465	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BVL33_13470	SM00851	MGS-like domain
BVL33_13470	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BVL33_13535	SM00244	prohibitin homologues
BVL33_13560	SM00881	CoA binding domain
BVL33_13580	SM00861	Transketolase, pyrimidine binding domain
BVL33_13610	SM01324	BVL33_13610
BVL33_13625	SM00450	Rhodanese Homology Domain
BVL33_13765	SM00014	Acid phosphatase homologues
BVL33_13800	SM00822	BVL33_13800
BVL33_13860	SM00387	Histidine kinase-like ATPases
BVL33_13860	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_13865	SM00448	cheY-homologous receiver domain
BVL33_13865	SM00862	Transcriptional regulatory protein, C terminal
BVL33_13885	SM00563	Phosphate acyltransferases
BVL33_13900	SM00244	prohibitin homologues
BVL33_13940	SM00014	Acid phosphatase homologues
BVL33_13970	SM00387	Histidine kinase-like ATPases
BVL33_13970	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_14015	SM00316	Ribosomal protein S1-like RNA-binding domain
BVL33_14050	SM00845	GatB domain
BVL33_14055	SM00901	BVL33_14055
BVL33_14220	SM00073	Histidine Phosphotransfer domain
BVL33_14220	SM00260	Two component signalling adaptor domain
BVL33_14220	SM00387	Histidine kinase-like ATPases
BVL33_14220	SM00448	cheY-homologous receiver domain
BVL33_14220	SM01231	BVL33_14220
BVL33_14225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BVL33_14230	SM00260	Two component signalling adaptor domain
BVL33_14235	SM00448	cheY-homologous receiver domain
BVL33_14240	SM00448	cheY-homologous receiver domain
BVL33_14280	SM00671	Sel1-like repeats.
BVL33_14290	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BVL33_14290	SM01232	BVL33_14290
BVL33_14310	SM00838	Elongation factor G C-terminus
BVL33_14375	SM00564	beta-propeller repeat
BVL33_14390	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_14465	SM00957	SecA DEAD-like domain
BVL33_14465	SM00958	SecA preprotein cross-linking domain
BVL33_14475	SM00849	Metallo-beta-lactamase superfamily
BVL33_14480	SM00195	Dual specificity phosphatase, catalytic domain
BVL33_14515	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_14590	SM00448	cheY-homologous receiver domain
BVL33_14590	SM00862	Transcriptional regulatory protein, C terminal
BVL33_14595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BVL33_14595	SM00387	Histidine kinase-like ATPases
BVL33_14595	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_14700	SM00984	UDP binding domain
BVL33_14715	SM00387	Histidine kinase-like ATPases
BVL33_14715	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_14745	SM01323	BVL33_14745
BVL33_14770	SM00564	beta-propeller repeat
BVL33_14795	SM00028	Tetratricopeptide repeats
BVL33_14805	SM00562	BVL33_14805
BVL33_14815	SM00014	Acid phosphatase homologues
BVL33_14830	SM00650	Ribosomal RNA adenine dimethylases
BVL33_14885	SM00960	Roadblock/LC7 domain
BVL33_14905	SM00878	Biotin carboxylase C-terminal domain
BVL33_15010	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BVL33_15040	SM00729	Elongator protein 3, MiaB family, Radical SAM
BVL33_15175	SM00360	RNA recognition motif
BVL33_15200	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BVL33_15200	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BVL33_15200	SM00493	BVL33_15200
BVL33_15220	SM00382	ATPases associated with a variety of cellular activities
BVL33_15240	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BVL33_15255	SM00870	BVL33_15255
BVL33_15265	SM00342	helix_turn_helix, arabinose operon control protein
BVL33_15270	SM00316	Ribosomal protein S1-like RNA-binding domain
BVL33_15285	SM01329	BVL33_15285
BVL33_15340	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BVL33_15345	SM01060	BVL33_15345
BVL33_15375	SM00363	S4 RNA-binding domain
BVL33_15385	SM00316	Ribosomal protein S1-like RNA-binding domain
BVL33_15410	SM00729	Elongator protein 3, MiaB family, Radical SAM
BVL33_15460	SM00903	Flavin reductase like domain
BVL33_15490	SM00849	Metallo-beta-lactamase superfamily
BVL33_15560	SM00116	Domain in cystathionine beta-synthase and other proteins.
BVL33_15560	SM01091	Transporter associated domain
BVL33_15585	SM00487	DEAD-like helicases superfamily
BVL33_15585	SM00490	helicase superfamily c-terminal domain
BVL33_15600	SM00271	DnaJ molecular chaperone homology domain
BVL33_15615	SM00316	Ribosomal protein S1-like RNA-binding domain
BVL33_15615	SM00322	K homology RNA-binding domain
BVL33_15620	SM01387	BVL33_15620
BVL33_15745	SM00316	Ribosomal protein S1-like RNA-binding domain
BVL33_15805	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BVL33_15825	SM00732	Likely ribonuclease with RNase H fold.
BVL33_15845	SM00346	helix_turn_helix isocitrate lyase regulation
BVL33_15860	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BVL33_15860	SM00465	GIY-YIG type nucleases (URI domain)
BVL33_15880	SM00267	diguanylate cyclase
BVL33_15910	SM00382	ATPases associated with a variety of cellular activities
BVL33_15940	SM00387	Histidine kinase-like ATPases
BVL33_15975	SM00663	RNA polymerase I subunit A N-terminus
BVL33_16000	SM00649	Ribosomal protein L11/L12
BVL33_16005	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BVL33_16005	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BVL33_16055	SM00240	Forkhead associated domain
BVL33_16065	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BVL33_16075	SM00528	Domain in histone-like proteins of HNS family
BVL33_16105	SM00448	cheY-homologous receiver domain
BVL33_16105	SM00850	LytTr DNA-binding domain
BVL33_16175	SM00899	BVL33_16175
BVL33_16215	SM00421	helix_turn_helix, Lux Regulon
BVL33_16215	SM00448	cheY-homologous receiver domain
BVL33_16220	SM00387	Histidine kinase-like ATPases
BVL33_16220	SM00388	His Kinase A (phosphoacceptor) domain
BVL33_16225	SM00382	ATPases associated with a variety of cellular activities
BVL33_16225	SM00448	cheY-homologous receiver domain
BVL33_16230	SM00245	tail specific protease
