locus-tag class description ABCA12_0001 PF08299 Bacterial dnaA protein helix-turn-helix ABCA12_0001 PF00308 Bacterial dnaA protein ABCA12_0001 PF11638 DnaA N-terminal domain ABCA12_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain ABCA12_0002 PF02767 DNA polymerase III beta subunit, central domain ABCA12_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain ABCA12_0003 PF02463 RecF/RecN/SMC N terminal domain ABCA12_0004 PF01751 Toprim domain ABCA12_0004 PF00204 DNA gyrase B ABCA12_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_0004 PF00986 DNA gyrase B subunit, carboxyl terminus ABCA12_0004 PF18053 DNA gyrase B subunit insert domain ABCA12_0006 PF09335 SNARE associated Golgi protein ABCA12_0007 PF12848 ABC transporter ABCA12_0007 PF00005 ABC transporter ABCA12_0014 PF01521 Iron-sulphur cluster biosynthesis ABCA12_0015 PF03702 Anhydro-N-acetylmuramic acid kinase ABCA12_0016 PF00579 tRNA synthetases class I (W and Y) ABCA12_0022 PF00209 Sodium:neurotransmitter symporter family ABCA12_0024 PF01189 16S rRNA methyltransferase RsmB/F ABCA12_0024 PF01029 NusB family ABCA12_0025 PF02911 Formyl transferase, C-terminal domain ABCA12_0025 PF00551 Formyl transferase ABCA12_0026 PF00920 Dehydratase family ABCA12_0029 PF00860 Permease family ABCA12_0030 PF00311 Phosphoenolpyruvate carboxylase ABCA12_0031 PF00440 Bacterial regulatory proteins, tetR family ABCA12_0032 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCA12_0033 PF00873 AcrB/AcrD/AcrF family ABCA12_0035 PF00226 DnaJ domain ABCA12_0035 PF00684 DnaJ central domain ABCA12_0035 PF01556 DnaJ C terminal domain ABCA12_0036 PF05173 Dihydrodipicolinate reductase, C-terminus ABCA12_0036 PF01113 Dihydrodipicolinate reductase, N-terminus ABCA12_0038 PF07690 Major Facilitator Superfamily ABCA12_0039 PF00248 Aldo/keto reductase family ABCA12_0040 PF03466 LysR substrate binding domain ABCA12_0040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_0042 PF00155 Aminotransferase class I and II ABCA12_0042 PF00392 Bacterial regulatory proteins, gntR family ABCA12_0043 PF00107 Zinc-binding dehydrogenase ABCA12_0043 PF08240 Alcohol dehydrogenase GroES-like domain ABCA12_0044 PF03352 Methyladenine glycosylase ABCA12_0046 PF01551 Peptidase family M23 ABCA12_0047 PF00730 HhH-GPD superfamily base excision DNA repair protein ABCA12_0047 PF14815 NUDIX domain ABCA12_0047 PF00633 Helix-hairpin-helix motif ABCA12_0049 PF07043 Protein of unknown function (DUF1328) ABCA12_0050 PF03692 Putative zinc- or iron-chelating domain ABCA12_0051 PF07995 Glucose / Sorbosone dehydrogenase ABCA12_0052 PF00144 Beta-lactamase ABCA12_0053 PF12002 MgsA AAA+ ATPase C terminal ABCA12_0053 PF00004 ATPase family associated with various cellular activities (AAA) ABCA12_0053 PF16193 AAA C-terminal domain ABCA12_0054 PF00892 EamA-like transporter family ABCA12_0057 PF01259 SAICAR synthetase ABCA12_0059 PF00701 Dihydrodipicolinate synthetase family ABCA12_0060 PF00857 Isochorismatase family ABCA12_0063 PF13817 IS66 C-terminal element ABCA12_0063 PF13007 Transposase C of IS166 homeodomain ABCA12_0063 PF03050 Transposase IS66 family ABCA12_0063 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_0075 PF06527 TniQ ABCA12_0075 PF15978 Tn7-like transposition protein D ABCA12_0076 PF13401 AAA domain ABCA12_0076 PF11426 Tn7 transposition regulator TnsC ABCA12_0077 PF00665 Integrase core domain ABCA12_0078 PF08722 TnsA endonuclease N terminal ABCA12_0078 PF08721 TnsA endonuclease C terminal ABCA12_0079 PF01380 SIS domain ABCA12_0080 PF00132 Bacterial transferase hexapeptide (six repeats) ABCA12_0080 PF14602 Hexapeptide repeat of succinyl-transferase ABCA12_0080 PF12804 MobA-like NTP transferase domain ABCA12_0081 PF04608 Phosphatidylglycerophosphatase A ABCA12_0082 PF02769 AIR synthase related protein, C-terminal domain ABCA12_0082 PF00586 AIR synthase related protein, N-terminal domain ABCA12_0083 PF01029 NusB family ABCA12_0084 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABCA12_0085 PF00925 GTP cyclohydrolase II ABCA12_0085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABCA12_0090 PF02580 D-Tyr-tRNA(Tyr) deacylase ABCA12_0091 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABCA12_0091 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABCA12_0093 PF00581 Rhodanese-like domain ABCA12_0094 PF02666 Phosphatidylserine decarboxylase ABCA12_0096 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_0096 PF03466 LysR substrate binding domain ABCA12_0099 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_0099 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_0099 PF11808 Phosphate regulon sensor protein PhoR ABCA12_0099 PF00989 PAS fold ABCA12_0100 PF00072 Response regulator receiver domain ABCA12_0100 PF00486 Transcriptional regulatory protein, C terminal ABCA12_0102 PF00106 short chain dehydrogenase ABCA12_0103 PF01554 MatE ABCA12_0104 PF00155 Aminotransferase class I and II ABCA12_0106 PF04286 Protein of unknown function (DUF445) ABCA12_0109 PF04262 Glutamate-cysteine ligase ABCA12_0110 PF02600 Disulfide bond formation protein DsbB ABCA12_0111 PF04717 Type VI secretion system, phage-baseplate injector ABCA12_0111 PF13296 Putative type VI secretion system Rhs element Vgr ABCA12_0111 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ABCA12_0112 PF01476 LysM domain ABCA12_0112 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABCA12_0114 PF13737 Transposase DDE domain ABCA12_0118 PF05728 Uncharacterised protein family (UPF0227) ABCA12_0121 PF01554 MatE ABCA12_0123 PF02653 Branched-chain amino acid transport system / permease component ABCA12_0125 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABCA12_0125 PF00005 ABC transporter ABCA12_0126 PF00005 ABC transporter ABCA12_0129 PF00583 Acetyltransferase (GNAT) family ABCA12_0134 PF11412 Disulphide bond corrector protein DsbC ABCA12_0134 PF02683 Cytochrome C biogenesis protein transmembrane region ABCA12_0136 PF00990 Diguanylate cyclase, GGDEF domain ABCA12_0136 PF17151 Periplasmic sensor domain ABCA12_0137 PF07859 alpha/beta hydrolase fold ABCA12_0140 PF03372 Endonuclease/Exonuclease/phosphatase family ABCA12_0141 PF00156 Phosphoribosyl transferase domain ABCA12_0143 PF13737 Transposase DDE domain ABCA12_0149 PF01661 Macro domain ABCA12_0152 PF01047 MarR family ABCA12_0153 PF00255 Glutathione peroxidase ABCA12_0154 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ABCA12_0154 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ABCA12_0155 PF03033 Glycosyltransferase family 28 N-terminal domain ABCA12_0155 PF04101 Glycosyltransferase family 28 C-terminal domain ABCA12_0156 PF08245 Mur ligase middle domain ABCA12_0156 PF02875 Mur ligase family, glutamate ligase domain ABCA12_0156 PF01225 Mur ligase family, catalytic domain ABCA12_0157 PF07478 D-ala D-ala ligase C-terminus ABCA12_0157 PF01820 D-ala D-ala ligase N-terminus ABCA12_0158 PF03799 Cell division protein FtsQ ABCA12_0158 PF08478 POTRA domain, FtsQ-type ABCA12_0159 PF02491 SHS2 domain inserted in FTSA ABCA12_0160 PF12327 FtsZ family, C-terminal domain ABCA12_0160 PF00091 Tubulin/FtsZ family, GTPase domain ABCA12_0161 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ABCA12_0164 PF17831 Pyruvate dehydrogenase E1 component middle domain ABCA12_0164 PF00456 Transketolase, thiamine diphosphate binding domain ABCA12_0165 PF00364 Biotin-requiring enzyme ABCA12_0165 PF02817 e3 binding domain ABCA12_0165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABCA12_0167 PF01169 Uncharacterized protein family UPF0016 ABCA12_0168 PF00593 TonB dependent receptor ABCA12_0168 PF07715 TonB-dependent Receptor Plug Domain ABCA12_0169 PF01613 Flavin reductase like domain ABCA12_0169 PF00258 Flavodoxin ABCA12_0170 PF03692 Putative zinc- or iron-chelating domain ABCA12_0171 PF00478 IMP dehydrogenase / GMP reductase domain ABCA12_0171 PF00571 CBS domain ABCA12_0172 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABCA12_0172 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABCA12_0172 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABCA12_0172 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABCA12_0173 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ABCA12_0173 PF01243 Pyridoxamine 5'-phosphate oxidase ABCA12_0174 PF17768 RecJ OB domain ABCA12_0174 PF02272 DHHA1 domain ABCA12_0174 PF01368 DHH family ABCA12_0177 PF00472 RF-1 domain ABCA12_0177 PF03462 PCRF domain ABCA12_0179 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCA12_0180 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ABCA12_0181 PF04452 RNA methyltransferase ABCA12_0182 PF00924 Mechanosensitive ion channel ABCA12_0184 PF00501 AMP-binding enzyme ABCA12_0184 PF13193 AMP-binding enzyme C-terminal domain ABCA12_0184 PF16177 Acetyl-coenzyme A synthetase N-terminus ABCA12_0185 PF00857 Isochorismatase family ABCA12_0187 PF00296 Luciferase-like monooxygenase ABCA12_0188 PF03358 NADPH-dependent FMN reductase ABCA12_0189 PF00196 Bacterial regulatory proteins, luxR family ABCA12_0189 PF00072 Response regulator receiver domain ABCA12_0191 PF00990 Diguanylate cyclase, GGDEF domain ABCA12_0193 PF17760 UvrA interaction domain ABCA12_0193 PF17755 UvrA DNA-binding domain ABCA12_0194 PF00440 Bacterial regulatory proteins, tetR family ABCA12_0194 PF16925 Tetracyclin repressor-like, C-terminal domain ABCA12_0195 PF08240 Alcohol dehydrogenase GroES-like domain ABCA12_0195 PF00107 Zinc-binding dehydrogenase ABCA12_0195 PF14765 Polyketide synthase dehydratase ABCA12_0195 PF00550 Phosphopantetheine attachment site ABCA12_0195 PF08659 KR domain ABCA12_0195 PF02801 Beta-ketoacyl synthase, C-terminal domain ABCA12_0195 PF00109 Beta-ketoacyl synthase, N-terminal domain ABCA12_0195 PF00698 Acyl transferase domain ABCA12_0195 PF16197 Ketoacyl-synthetase C-terminal extension ABCA12_0197 PF03070 TENA/THI-4/PQQC family ABCA12_0199 PF07690 Major Facilitator Superfamily ABCA12_0200 PF00436 Single-strand binding protein family ABCA12_0201 PF00324 Amino acid permease ABCA12_0202 PF00392 Bacterial regulatory proteins, gntR family ABCA12_0202 PF00155 Aminotransferase class I and II ABCA12_0203 PF00202 Aminotransferase class-III ABCA12_0204 PF00171 Aldehyde dehydrogenase family ABCA12_0205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_0206 PF00857 Isochorismatase family ABCA12_0207 PF05726 Pirin C-terminal cupin domain ABCA12_0207 PF02678 Pirin ABCA12_0208 PF01593 Flavin containing amine oxidoreductase ABCA12_0212 PF13296 Putative type VI secretion system Rhs element Vgr ABCA12_0212 PF04717 Type VI secretion system, phage-baseplate injector ABCA12_0212 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ABCA12_0213 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_0232 PF13676 TIR domain ABCA12_0242 PF03796 DnaB-like helicase C terminal domain ABCA12_0242 PF00772 DnaB-like helicase N terminal domain ABCA12_0250 PF13356 Arm DNA-binding domain ABCA12_0250 PF00589 Phage integrase family ABCA12_0251 PF02705 K+ potassium transporter ABCA12_0257 PF00977 Histidine biosynthesis protein ABCA12_0258 PF01636 Phosphotransferase enzyme family ABCA12_0262 PF03992 Antibiotic biosynthesis monooxygenase ABCA12_0264 PF01381 Helix-turn-helix ABCA12_0264 PF08671 Anti-repressor SinI ABCA12_0265 PF01740 STAS domain ABCA12_0265 PF00916 Sulfate permease family ABCA12_0266 PF00977 Histidine biosynthesis protein ABCA12_0269 PF00117 Glutamine amidotransferase class-I ABCA12_0270 PF00475 Imidazoleglycerol-phosphate dehydratase ABCA12_0273 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ABCA12_0273 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ABCA12_0274 PF00672 HAMP domain ABCA12_0274 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_0274 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_0275 PF00486 Transcriptional regulatory protein, C terminal ABCA12_0275 PF00072 Response regulator receiver domain ABCA12_0276 PF16921 Tex protein YqgF-like domain ABCA12_0276 PF09371 Tex-like protein N-terminal domain ABCA12_0276 PF00575 S1 RNA binding domain ABCA12_0276 PF17674 HHH domain ABCA12_0283 PF00083 Sugar (and other) transporter ABCA12_0284 PF13411 MerR HTH family regulatory protein ABCA12_0285 PF00550 Phosphopantetheine attachment site ABCA12_0285 PF07993 Male sterility protein ABCA12_0286 PF00106 short chain dehydrogenase ABCA12_0287 PF01053 Cys/Met metabolism PLP-dependent enzyme ABCA12_0288 PF00005 ABC transporter ABCA12_0288 PF12848 ABC transporter ABCA12_0296 PF00529 HlyD membrane-fusion protein of T1SS ABCA12_0296 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCA12_0297 PF00873 AcrB/AcrD/AcrF family ABCA12_0298 PF01545 Cation efflux family ABCA12_0303 PF00324 Amino acid permease ABCA12_0304 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABCA12_0308 PF01795 MraW methylase family ABCA12_0310 PF00905 Penicillin binding protein transpeptidase domain ABCA12_0310 PF03717 Penicillin-binding Protein dimerisation domain ABCA12_0311 PF02875 Mur ligase family, glutamate ligase domain ABCA12_0311 PF01225 Mur ligase family, catalytic domain ABCA12_0311 PF08245 Mur ligase middle domain ABCA12_0312 PF08245 Mur ligase middle domain ABCA12_0312 PF02875 Mur ligase family, glutamate ligase domain ABCA12_0312 PF01225 Mur ligase family, catalytic domain ABCA12_0315 PF13847 Methyltransferase domain ABCA12_0316 PF00912 Transglycosylase ABCA12_0316 PF17092 Penicillin-binding protein OB-like domain ABCA12_0316 PF00905 Penicillin binding protein transpeptidase domain ABCA12_0317 PF11104 Type IV pilus assembly protein PilM; ABCA12_0318 PF05137 Fimbrial assembly protein (PilN) ABCA12_0319 PF04350 Pilus assembly protein, PilO ABCA12_0321 PF03958 Bacterial type II/III secretion system short domain ABCA12_0321 PF07660 Secretin and TonB N terminus short domain ABCA12_0321 PF00263 Bacterial type II and III secretion system protein ABCA12_0321 PF11741 AMIN domain ABCA12_0322 PF01202 Shikimate kinase ABCA12_0323 PF01761 3-dehydroquinate synthase ABCA12_0325 PF04898 Glutamate synthase central domain ABCA12_0325 PF00310 Glutamine amidotransferases class-II ABCA12_0325 PF01493 GXGXG motif ABCA12_0325 PF01645 Conserved region in glutamate synthase ABCA12_0326 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_0326 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABCA12_0327 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_0327 PF13817 IS66 C-terminal element ABCA12_0327 PF03050 Transposase IS66 family ABCA12_0327 PF13007 Transposase C of IS166 homeodomain ABCA12_0330 PF04011 LemA family ABCA12_0331 PF04536 TPM domain ABCA12_0333 PF00114 Pilin (bacterial filament) ABCA12_0333 PF07963 Prokaryotic N-terminal methylation motif ABCA12_0334 PF07963 Prokaryotic N-terminal methylation motif ABCA12_0334 PF00114 Pilin (bacterial filament) ABCA12_0339 PF00210 Ferritin-like domain ABCA12_0340 PF04324 BFD-like [2Fe-2S] binding domain ABCA12_0341 PF01042 Endoribonuclease L-PSP ABCA12_0342 PF02824 TGS domain ABCA12_0342 PF13291 ACT domain ABCA12_0342 PF04607 Region found in RelA / SpoT proteins ABCA12_0343 PF01192 RNA polymerase Rpb6 ABCA12_0344 PF00625 Guanylate kinase ABCA12_0345 PF02401 LytB protein ABCA12_0350 PF00114 Pilin (bacterial filament) ABCA12_0350 PF07963 Prokaryotic N-terminal methylation motif ABCA12_0360 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_0360 PF13007 Transposase C of IS166 homeodomain ABCA12_0360 PF13817 IS66 C-terminal element ABCA12_0360 PF03050 Transposase IS66 family ABCA12_0361 PF00114 Pilin (bacterial filament) ABCA12_0361 PF07963 Prokaryotic N-terminal methylation motif ABCA12_0362 PF00886 Ribosomal protein S16 ABCA12_0363 PF05239 PRC-barrel domain ABCA12_0363 PF01782 RimM N-terminal domain ABCA12_0364 PF01746 tRNA (Guanine-1)-methyltransferase ABCA12_0365 PF01245 Ribosomal protein L19 ABCA12_0366 PF00561 alpha/beta hydrolase fold ABCA12_0367 PF03280 Proteobacterial lipase chaperone protein ABCA12_0368 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABCA12_0368 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABCA12_0368 PF09157 Pseudouridine synthase II TruB, C-terminal ABCA12_0369 PF01925 Sulfite exporter TauE/SafE ABCA12_0371 PF00892 EamA-like transporter family ABCA12_0372 PF00892 EamA-like transporter family ABCA12_0373 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABCA12_0373 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABCA12_0374 PF02913 FAD linked oxidases, C-terminal domain ABCA12_0374 PF01565 FAD binding domain ABCA12_0378 PF03992 Antibiotic biosynthesis monooxygenase ABCA12_0379 PF02525 Flavodoxin-like fold ABCA12_0382 PF07690 Major Facilitator Superfamily ABCA12_0383 PF12805 FUSC-like inner membrane protein yccS ABCA12_0384 PF00080 Copper/zinc superoxide dismutase (SODC) ABCA12_0385 PF01594 AI-2E family transporter ABCA12_0386 PF13614 AAA domain ABCA12_0388 PF01209 ubiE/COQ5 methyltransferase family ABCA12_0391 PF01938 TRAM domain ABCA12_0391 PF05958 tRNA (Uracil-5-)-methyltransferase ABCA12_0399 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_0399 PF13359 DDE superfamily endonuclease ABCA12_0401 PF13737 Transposase DDE domain ABCA12_0403 PF02092 Glycyl-tRNA synthetase beta subunit ABCA12_0403 PF05746 DALR anticodon binding domain ABCA12_0404 PF02091 Glycyl-tRNA synthetase alpha subunit ABCA12_0407 PF00939 Sodium:sulfate symporter transmembrane region ABCA12_0409 PF01743 Poly A polymerase head domain ABCA12_0409 PF00571 CBS domain ABCA12_0410 PF04024 PspC domain ABCA12_0412 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_0412 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_0412 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABCA12_0412 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_0414 PF08501 Shikimate dehydrogenase substrate binding domain ABCA12_0414 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABCA12_0414 PF01488 Shikimate / quinate 5-dehydrogenase ABCA12_0415 PF01218 Coproporphyrinogen III oxidase ABCA12_0416 PF00925 GTP cyclohydrolase II ABCA12_0417 PF02780 Transketolase, C-terminal domain ABCA12_0417 PF02779 Transketolase, pyrimidine binding domain ABCA12_0417 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABCA12_0418 PF00459 Inositol monophosphatase family ABCA12_0419 PF00271 Helicase conserved C-terminal domain ABCA12_0419 PF00270 DEAD/DEAH box helicase ABCA12_0421 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_0422 PF00005 ABC transporter ABCA12_0423 PF02405 Permease MlaE ABCA12_0424 PF02470 MlaD protein ABCA12_0425 PF05494 MlaC protein ABCA12_0428 PF01544 CorA-like Mg2+ transporter protein ABCA12_0429 PF03641 Possible lysine decarboxylase ABCA12_0431 PF00156 Phosphoribosyl transferase domain ABCA12_0432 PF17191 RecG wedge domain ABCA12_0432 PF00271 Helicase conserved C-terminal domain ABCA12_0432 PF00270 DEAD/DEAH box helicase ABCA12_0435 PF01553 Acyltransferase ABCA12_0437 PF00375 Sodium:dicarboxylate symporter family ABCA12_0439 PF01926 50S ribosome-binding GTPase ABCA12_0440 PF02082 Transcriptional regulator ABCA12_0441 PF00042 Globin ABCA12_0441 PF00970 Oxidoreductase FAD-binding domain ABCA12_0441 PF00175 Oxidoreductase NAD-binding domain ABCA12_0442 PF05872 Bacterial protein of unknown function (DUF853) ABCA12_0443 PF01053 Cys/Met metabolism PLP-dependent enzyme ABCA12_0444 PF00117 Glutamine amidotransferase class-I ABCA12_0445 PF00338 Ribosomal protein S10p/S20e ABCA12_0446 PF00297 Ribosomal protein L3 ABCA12_0447 PF00573 Ribosomal protein L4/L1 family ABCA12_0448 PF00276 Ribosomal protein L23 ABCA12_0449 PF00181 Ribosomal Proteins L2, RNA binding domain ABCA12_0449 PF03947 Ribosomal Proteins L2, C-terminal domain ABCA12_0450 PF00203 Ribosomal protein S19 ABCA12_0451 PF00237 Ribosomal protein L22p/L17e ABCA12_0452 PF00189 Ribosomal protein S3, C-terminal domain ABCA12_0452 PF07650 KH domain ABCA12_0453 PF00252 Ribosomal protein L16p/L10e ABCA12_0454 PF00831 Ribosomal L29 protein ABCA12_0455 PF00366 Ribosomal protein S17 ABCA12_0456 PF00238 Ribosomal protein L14p/L23e ABCA12_0457 PF00467 KOW motif ABCA12_0457 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABCA12_0458 PF00281 Ribosomal protein L5 ABCA12_0458 PF00673 ribosomal L5P family C-terminus ABCA12_0459 PF00253 Ribosomal protein S14p/S29e ABCA12_0460 PF00410 Ribosomal protein S8 ABCA12_0461 PF00347 Ribosomal protein L6 ABCA12_0462 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABCA12_0463 PF00333 Ribosomal protein S5, N-terminal domain ABCA12_0463 PF03719 Ribosomal protein S5, C-terminal domain ABCA12_0464 PF00327 Ribosomal protein L30p/L7e ABCA12_0465 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABCA12_0466 PF00344 SecY translocase ABCA12_0468 PF00416 Ribosomal protein S13/S18 ABCA12_0469 PF00411 Ribosomal protein S11 ABCA12_0470 PF00163 Ribosomal protein S4/S9 N-terminal domain ABCA12_0470 PF01479 S4 domain ABCA12_0471 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABCA12_0471 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABCA12_0471 PF01000 RNA polymerase Rpb3/RpoA insert domain ABCA12_0472 PF01196 Ribosomal protein L17 ABCA12_0474 PF00743 Flavin-binding monooxygenase-like ABCA12_0476 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_0476 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_0476 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_0477 PF03937 Flavinator of succinate dehydrogenase ABCA12_0487 PF00892 EamA-like transporter family ABCA12_0490 PF01432 Peptidase family M3 ABCA12_0492 PF08461 Ribonuclease R winged-helix domain ABCA12_0492 PF08206 Ribonuclease B OB domain ABCA12_0492 PF00575 S1 RNA binding domain ABCA12_0492 PF17876 Cold shock domain ABCA12_0492 PF00773 RNB domain ABCA12_0501 PF03631 Virulence factor BrkB ABCA12_0502 PF03358 NADPH-dependent FMN reductase ABCA12_0508 PF00902 Sec-independent protein translocase protein (TatC) ABCA12_0509 PF02416 mttA/Hcf106 family ABCA12_0510 PF02416 mttA/Hcf106 family ABCA12_0511 PF01725 Ham1 family ABCA12_0512 PF01725 Ham1 family ABCA12_0515 PF07021 Methionine biosynthesis protein MetW ABCA12_0515 PF00561 alpha/beta hydrolase fold ABCA12_0516 PF00561 alpha/beta hydrolase fold ABCA12_0517 PF08502 LeuA allosteric (dimerisation) domain ABCA12_0517 PF00682 HMGL-like ABCA12_0518 PF18331 PKHD-type hydroxylase C-terminal domain ABCA12_0518 PF13640 2OG-Fe(II) oxygenase superfamily ABCA12_0519 PF00593 TonB dependent receptor ABCA12_0519 PF07715 TonB-dependent Receptor Plug Domain ABCA12_0520 PF05697 Bacterial trigger factor protein (TF) ABCA12_0520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCA12_0520 PF05698 Bacterial trigger factor protein (TF) C-terminus ABCA12_0521 PF00574 Clp protease ABCA12_0522 PF07724 AAA domain (Cdc48 subfamily) ABCA12_0522 PF10431 C-terminal, D2-small domain, of ClpB protein ABCA12_0522 PF06689 ClpX C4-type zinc finger ABCA12_0525 PF05681 Fumarate hydratase (Fumerase) ABCA12_0525 PF05683 Fumarase C-terminus ABCA12_0528 PF07085 DRTGG domain ABCA12_0528 PF01515 Phosphate acetyl/butaryl transferase ABCA12_0529 PF00871 Acetokinase family ABCA12_0530 PF00171 Aldehyde dehydrogenase family ABCA12_0531 PF12697 Alpha/beta hydrolase family ABCA12_0533 PF00933 Glycosyl hydrolase family 3 N terminal domain ABCA12_0534 PF00595 PDZ domain ABCA12_0534 PF11818 C-terminal domain of tail specific protease (DUF3340) ABCA12_0534 PF03572 Peptidase family S41 ABCA12_0534 PF17804 Tail specific protease N-terminal domain ABCA12_0539 PF01926 50S ribosome-binding GTPase ABCA12_0539 PF16360 GTP-binding GTPase Middle Region ABCA12_0539 PF13167 GTP-binding GTPase N-terminal ABCA12_0542 PF13091 PLD-like domain ABCA12_0543 PF00149 Calcineurin-like phosphoesterase ABCA12_0543 PF10518 TAT (twin-arginine translocation) pathway signal sequence ABCA12_0544 PF01389 OmpA-like transmembrane domain ABCA12_0544 PF00691 OmpA family ABCA12_0545 PF00990 Diguanylate cyclase, GGDEF domain ABCA12_0545 PF17152 Periplasmic sensor domain ABCA12_0551 PF00085 Thioredoxin ABCA12_0552 PF03061 Thioesterase superfamily ABCA12_0558 PF04461 Protein of unknown function (DUF520) ABCA12_0560 PF01266 FAD dependent oxidoreductase ABCA12_0560 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ABCA12_0562 PF03795 YCII-related domain ABCA12_0563 PF04279 Intracellular septation protein A ABCA12_0564 PF02811 PHP domain ABCA12_0565 PF01062 Bestrophin, RFP-TM, chloride channel ABCA12_0566 PF04002 RadC-like JAB domain ABCA12_0567 PF04127 DNA / pantothenate metabolism flavoprotein ABCA12_0567 PF02441 Flavoprotein ABCA12_0569 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABCA12_0569 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABCA12_0571 PF02556 Preprotein translocase subunit SecB ABCA12_0572 PF00462 Glutaredoxin ABCA12_0574 PF03193 RsgA GTPase ABCA12_0575 PF00929 Exonuclease ABCA12_0580 PF02321 Outer membrane efflux protein ABCA12_0581 PF00005 ABC transporter ABCA12_0581 PF12704 MacB-like periplasmic core domain ABCA12_0581 PF02687 FtsX-like permease family ABCA12_0582 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCA12_0584 PF06144 DNA polymerase III, delta subunit ABCA12_0586 PF00133 tRNA synthetases class I (I, L, M and V) ABCA12_0586 PF13603 Leucyl-tRNA synthetase, Domain 2 ABCA12_0586 PF09334 tRNA synthetases class I (M) ABCA12_0586 PF08264 Anticodon-binding domain of tRNA ABCA12_0588 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABCA12_0588 PF00205 Thiamine pyrophosphate enzyme, central domain ABCA12_0588 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABCA12_0589 PF10369 Small subunit of acetolactate synthase ABCA12_0590 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABCA12_0590 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABCA12_0591 PF00990 Diguanylate cyclase, GGDEF domain ABCA12_0591 PF00563 EAL domain ABCA12_0591 PF03707 Bacterial signalling protein N terminal repeat ABCA12_0594 PF03960 ArsC family ABCA12_0595 PF01022 Bacterial regulatory protein, arsR family ABCA12_0597 PF01758 Sodium Bile acid symporter family ABCA12_0598 PF03358 NADPH-dependent FMN reductase ABCA12_0601 PF16658 Class II release factor RF3, C-terminal domain ABCA12_0601 PF03144 Elongation factor Tu domain 2 ABCA12_0601 PF00009 Elongation factor Tu GTP binding domain ABCA12_0603 PF11738 Protein of unknown function (DUF3298) ABCA12_0603 PF01522 Polysaccharide deacetylase ABCA12_0603 PF13739 Deacetylase PdaC ABCA12_0604 PF01026 TatD related DNase ABCA12_0605 PF00694 Aconitase C-terminal domain ABCA12_0605 PF00330 Aconitase family (aconitate hydratase) ABCA12_0607 PF00899 ThiF family ABCA12_0609 PF01207 Dihydrouridine synthase (Dus) ABCA12_0610 PF00589 Phage integrase family ABCA12_0622 PF05656 Protein of unknown function (DUF805) ABCA12_0625 PF13090 Polyphosphate kinase C-terminal domain 2 ABCA12_0625 PF13089 Polyphosphate kinase N-terminal domain ABCA12_0625 PF17941 Polyphosphate kinase C-terminal domain 1 ABCA12_0625 PF02503 Polyphosphate kinase middle domain ABCA12_0629 PF12161 HsdM N-terminal domain ABCA12_0629 PF02384 N-6 DNA Methylase ABCA12_0630 PF01420 Type I restriction modification DNA specificity domain ABCA12_0633 PF00176 SNF2 family N-terminal domain ABCA12_0633 PF00271 Helicase conserved C-terminal domain ABCA12_0634 PF18073 Rubredoxin metal binding domain ABCA12_0635 PF00270 DEAD/DEAH box helicase ABCA12_0635 PF17191 RecG wedge domain ABCA12_0635 PF13749 Putative ATP-dependent DNA helicase recG C-terminal ABCA12_0636 PF02661 Fic/DOC family ABCA12_0636 PF13784 Fic/DOC family N-terminal ABCA12_0638 PF07690 Major Facilitator Superfamily ABCA12_0640 PF00376 MerR family regulatory protein ABCA12_0640 PF09278 MerR, DNA binding ABCA12_0641 PF00376 MerR family regulatory protein ABCA12_0641 PF09278 MerR, DNA binding ABCA12_0642 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABCA12_0642 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABCA12_0644 PF02233 NAD(P) transhydrogenase beta subunit ABCA12_0645 PF00106 short chain dehydrogenase ABCA12_0646 PF00909 Ammonium Transporter Family ABCA12_0646 PF00672 HAMP domain ABCA12_0649 PF01261 Xylose isomerase-like TIM barrel ABCA12_0650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABCA12_0650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABCA12_0651 PF00378 Enoyl-CoA hydratase/isomerase ABCA12_0652 PF01627 Hpt domain ABCA12_0652 PF00672 HAMP domain ABCA12_0652 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ABCA12_0652 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_0652 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_0652 PF00072 Response regulator receiver domain ABCA12_0653 PF00291 Pyridoxal-phosphate dependent enzyme ABCA12_0655 PF05958 tRNA (Uracil-5-)-methyltransferase ABCA12_0656 PF04607 Region found in RelA / SpoT proteins ABCA12_0656 PF13291 ACT domain ABCA12_0656 PF02824 TGS domain ABCA12_0658 PF03819 MazG nucleotide pyrophosphohydrolase domain ABCA12_0660 PF12627 Probable RNA and SrmB- binding site of polymerase A ABCA12_0660 PF12626 Polymerase A arginine-rich C-terminus ABCA12_0660 PF01743 Poly A polymerase head domain ABCA12_0661 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABCA12_0662 PF02548 Ketopantoate hydroxymethyltransferase ABCA12_0663 PF02569 Pantoate-beta-alanine ligase ABCA12_0664 PF03668 P-loop ATPase protein family ABCA12_0665 PF00381 PTS HPr component phosphorylation site ABCA12_0666 PF04751 Protein of unknown function (DUF615) ABCA12_0667 PF13193 AMP-binding enzyme C-terminal domain ABCA12_0667 PF00501 AMP-binding enzyme ABCA12_0668 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABCA12_0668 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABCA12_0668 PF03129 Anticodon binding domain ABCA12_0668 PF02824 TGS domain ABCA12_0669 PF05198 Translation initiation factor IF-3, N-terminal domain ABCA12_0669 PF00707 Translation initiation factor IF-3, C-terminal domain ABCA12_0670 PF00011 Hsp20/alpha crystallin family ABCA12_0671 PF02798 Glutathione S-transferase, N-terminal domain ABCA12_0671 PF00043 Glutathione S-transferase, C-terminal domain ABCA12_0673 PF09335 SNARE associated Golgi protein ABCA12_0674 PF07690 Major Facilitator Superfamily ABCA12_0675 PF01632 Ribosomal protein L35 ABCA12_0676 PF00453 Ribosomal protein L20 ABCA12_0679 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABCA12_0679 PF01409 tRNA synthetases class II core domain (F) ABCA12_0680 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABCA12_0680 PF01588 Putative tRNA binding domain ABCA12_0680 PF03484 tRNA synthetase B5 domain ABCA12_0680 PF03147 Ferredoxin-fold anticodon binding domain ABCA12_0680 PF03483 B3/4 domain ABCA12_0681 PF00216 Bacterial DNA-binding protein ABCA12_0683 PF07497 Rho termination factor, RNA-binding domain ABCA12_0683 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABCA12_0683 PF07498 Rho termination factor, N-terminal domain ABCA12_0684 PF00085 Thioredoxin ABCA12_0685 PF02541 Ppx/GppA phosphatase family ABCA12_0686 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABCA12_0687 PF09179 TilS substrate binding domain ABCA12_0687 PF01171 PP-loop family ABCA12_0687 PF11734 TilS substrate C-terminal domain ABCA12_0688 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABCA12_0688 PF03807 NADP oxidoreductase coenzyme F420-dependent ABCA12_0689 PF02325 YGGT family ABCA12_0690 PF01367 5'-3' exonuclease, C-terminal SAM fold ABCA12_0690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABCA12_0690 PF00476 DNA polymerase family A ABCA12_0690 PF01612 3'-5' exonuclease ABCA12_0694 PF00437 Type II/IV secretion system protein ABCA12_0695 PF02566 OsmC-like protein ABCA12_0697 PF00795 Carbon-nitrogen hydrolase ABCA12_0701 PF04552 Sigma-54, DNA binding domain ABCA12_0701 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABCA12_0701 PF04963 Sigma-54 factor, core binding domain ABCA12_0702 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABCA12_0703 PF01722 BolA-like protein ABCA12_0704 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABCA12_0705 PF01634 ATP phosphoribosyltransferase ABCA12_0706 PF00815 Histidinol dehydrogenase ABCA12_0707 PF00155 Aminotransferase class I and II ABCA12_0708 PF00425 chorismate binding enzyme ABCA12_0708 PF04715 Anthranilate synthase component I, N terminal region ABCA12_0716 PF00293 NUDIX domain ABCA12_0718 PF00814 Glycoprotease family ABCA12_0719 PF02673 Bacitracin resistance protein BacA ABCA12_0720 PF04445 Putative SAM-dependent methyltransferase ABCA12_0722 PF00756 Putative esterase ABCA12_0724 PF00834 Ribulose-phosphate 3 epimerase family ABCA12_0726 PF07731 Multicopper oxidase ABCA12_0726 PF07732 Multicopper oxidase ABCA12_0726 PF00394 Multicopper oxidase ABCA12_0730 PF00893 Small Multidrug Resistance protein ABCA12_0731 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABCA12_0731 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABCA12_0732 PF01960 ArgJ family ABCA12_0733 PF02445 Quinolinate synthetase A protein ABCA12_0735 PF08378 Nuclease-related domain ABCA12_0736 PF00732 GMC oxidoreductase ABCA12_0736 PF05199 GMC oxidoreductase ABCA12_0738 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABCA12_0739 PF14572 Phosphoribosyl synthetase-associated domain ABCA12_0739 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABCA12_0740 PF00107 Zinc-binding dehydrogenase ABCA12_0740 PF08240 Alcohol dehydrogenase GroES-like domain ABCA12_0742 PF00732 GMC oxidoreductase ABCA12_0742 PF05199 GMC oxidoreductase ABCA12_0743 PF00171 Aldehyde dehydrogenase family ABCA12_0744 PF00440 Bacterial regulatory proteins, tetR family ABCA12_0744 PF13977 BetI-type transcriptional repressor, C-terminal ABCA12_0745 PF02028 BCCT, betaine/carnitine/choline family transporter ABCA12_0748 PF05977 Transmembrane secretion effector ABCA12_0749 PF06039 Malate:quinone oxidoreductase (Mqo) ABCA12_0758 PF01381 Helix-turn-helix ABCA12_0760 PF01527 Transposase ABCA12_0761 PF13333 Integrase core domain ABCA12_0761 PF13276 HTH-like domain ABCA12_0761 PF00665 Integrase core domain ABCA12_0762 PF00226 DnaJ domain ABCA12_0762 PF00684 DnaJ central domain ABCA12_0762 PF01556 DnaJ C terminal domain ABCA12_0763 PF00665 Integrase core domain ABCA12_0763 PF13276 HTH-like domain ABCA12_0765 PF04851 Type III restriction enzyme, res subunit ABCA12_0765 PF00271 Helicase conserved C-terminal domain ABCA12_0765 PF08463 EcoEI R protein C-terminal ABCA12_0765 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ABCA12_0766 PF02384 N-6 DNA Methylase ABCA12_0766 PF12161 HsdM N-terminal domain ABCA12_0767 PF13737 Transposase DDE domain ABCA12_0770 PF00268 Ribonucleotide reductase, small chain ABCA12_0772 PF00317 Ribonucleotide reductase, all-alpha domain ABCA12_0772 PF02867 Ribonucleotide reductase, barrel domain ABCA12_0772 PF03477 ATP cone domain ABCA12_0773 PF00486 Transcriptional regulatory protein, C terminal ABCA12_0773 PF00072 Response regulator receiver domain ABCA12_0774 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_0774 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_0774 PF00672 HAMP domain ABCA12_0776 PF00990 Diguanylate cyclase, GGDEF domain ABCA12_0776 PF17158 Membrane-associated sensor, integral membrane domain ABCA12_0777 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ABCA12_0778 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ABCA12_0779 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ABCA12_0779 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ABCA12_0781 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ABCA12_0781 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ABCA12_0781 PF10531 SLBB domain ABCA12_0782 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABCA12_0782 PF00384 Molybdopterin oxidoreductase ABCA12_0782 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABCA12_0783 PF00146 NADH dehydrogenase ABCA12_0784 PF12838 4Fe-4S dicluster domain ABCA12_0785 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ABCA12_0786 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABCA12_0787 PF00361 Proton-conducting membrane transporter ABCA12_0787 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABCA12_0788 PF00361 Proton-conducting membrane transporter ABCA12_0789 PF00361 Proton-conducting membrane transporter ABCA12_0792 PF13007 Transposase C of IS166 homeodomain ABCA12_0792 PF13817 IS66 C-terminal element ABCA12_0792 PF03050 Transposase IS66 family ABCA12_0792 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_0795 PF00313 'Cold-shock' DNA-binding domain ABCA12_0796 PF03466 LysR substrate binding domain ABCA12_0796 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_0797 PF00970 Oxidoreductase FAD-binding domain ABCA12_0797 PF00175 Oxidoreductase NAD-binding domain ABCA12_0800 PF05552 Conserved TM helix ABCA12_0804 PF00291 Pyridoxal-phosphate dependent enzyme ABCA12_0805 PF13533 Biotin-lipoyl like ABCA12_0810 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABCA12_0810 PF00753 Metallo-beta-lactamase superfamily ABCA12_0812 PF01588 Putative tRNA binding domain ABCA12_0812 PF09334 tRNA synthetases class I (M) ABCA12_0815 PF13302 Acetyltransferase (GNAT) domain ABCA12_0817 PF10609 NUBPL iron-transfer P-loop NTPase ABCA12_0818 PF01048 Phosphorylase superfamily ABCA12_0821 PF00692 dUTPase ABCA12_0827 PF05685 Putative restriction endonuclease ABCA12_0830 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_0830 PF13007 Transposase C of IS166 homeodomain ABCA12_0830 PF13817 IS66 C-terminal element ABCA12_0830 PF03050 Transposase IS66 family ABCA12_0831 PF01207 Dihydrouridine synthase (Dus) ABCA12_0833 PF00448 SRP54-type protein, GTPase domain ABCA12_0833 PF02881 SRP54-type protein, helical bundle domain ABCA12_0833 PF02978 Signal peptide binding domain ABCA12_0835 PF03309 Type III pantothenate kinase ABCA12_0838 PF01925 Sulfite exporter TauE/SafE ABCA12_0840 PF02463 RecF/RecN/SMC N terminal domain ABCA12_0840 PF06470 SMC proteins Flexible Hinge Domain ABCA12_0842 PF03120 NAD-dependent DNA ligase OB-fold domain ABCA12_0842 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABCA12_0842 PF00533 BRCA1 C Terminus (BRCT) domain ABCA12_0842 PF01653 NAD-dependent DNA ligase adenylation domain ABCA12_0842 PF12826 Helix-hairpin-helix motif ABCA12_0845 PF00210 Ferritin-like domain ABCA12_0846 PF00578 AhpC/TSA family ABCA12_0847 PF12697 Alpha/beta hydrolase family ABCA12_0847 PF08241 Methyltransferase domain ABCA12_0848 PF00202 Aminotransferase class-III ABCA12_0848 PF04055 Radical SAM superfamily ABCA12_0848 PF06968 Biotin and Thiamin Synthesis associated domain ABCA12_0849 PF00155 Aminotransferase class I and II ABCA12_0853 PF02472 Biopolymer transport protein ExbD/TolR ABCA12_0854 PF02472 Biopolymer transport protein ExbD/TolR ABCA12_0855 PF01618 MotA/TolQ/ExbB proton channel family ABCA12_0864 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_0865 PF12911 N-terminal TM domain of oligopeptide transport permease C ABCA12_0865 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_0868 PF01479 S4 domain ABCA12_0868 PF00849 RNA pseudouridylate synthase ABCA12_0869 PF04079 Segregation and condensation complex subunit ScpB ABCA12_0870 PF02616 Segregation and condensation protein ScpA ABCA12_0872 PF01300 Telomere recombination ABCA12_0873 PF04315 Elongation factor P hydroxylase ABCA12_0874 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABCA12_0875 PF01783 Ribosomal L32p protein family ABCA12_0876 PF00698 Acyl transferase domain ABCA12_0878 PF00550 Phosphopantetheine attachment site ABCA12_0879 PF00550 Phosphopantetheine attachment site ABCA12_0880 PF01476 LysM domain ABCA12_0880 PF04972 BON domain ABCA12_0881 PF02581 Thiamine monophosphate synthase ABCA12_0881 PF03070 TENA/THI-4/PQQC family ABCA12_0881 PF08543 Phosphomethylpyrimidine kinase ABCA12_0882 PF13419 Haloacid dehalogenase-like hydrolase ABCA12_0883 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABCA12_0887 PF01734 Patatin-like phospholipase ABCA12_0889 PF02261 Aspartate decarboxylase ABCA12_0890 PF01195 Peptidyl-tRNA hydrolase ABCA12_0891 PF01386 Ribosomal L25p family ABCA12_0892 PF14572 Phosphoribosyl synthetase-associated domain ABCA12_0892 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABCA12_0894 PF03550 Outer membrane lipoprotein LolB ABCA12_0896 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABCA12_0896 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABCA12_0896 PF01488 Shikimate / quinate 5-dehydrogenase ABCA12_0897 PF01807 CHC2 zinc finger ABCA12_0897 PF08275 DNA primase catalytic core, N-terminal domain ABCA12_0897 PF08278 DNA primase DnaG DnaB-binding ABCA12_0897 PF10410 DnaB-helicase binding domain of primase ABCA12_0898 PF13525 Outer membrane lipoprotein ABCA12_0899 PF01479 S4 domain ABCA12_0899 PF00849 RNA pseudouridylate synthase ABCA12_0900 PF02578 Multi-copper polyphenol oxidoreductase laccase ABCA12_0901 PF03358 NADPH-dependent FMN reductase ABCA12_0902 PF01668 SmpB protein ABCA12_0903 PF01467 Cytidylyltransferase-like ABCA12_0905 PF00795 Carbon-nitrogen hydrolase ABCA12_0905 PF02540 NAD synthase ABCA12_0912 PF03653 Uncharacterised protein family (UPF0093) ABCA12_0913 PF02801 Beta-ketoacyl synthase, C-terminal domain ABCA12_0913 PF00109 Beta-ketoacyl synthase, N-terminal domain ABCA12_0914 PF12787 EcsC protein family ABCA12_0915 PF00164 Ribosomal protein S12/S23 ABCA12_0916 PF00177 Ribosomal protein S7p/S5e ABCA12_0917 PF00009 Elongation factor Tu GTP binding domain ABCA12_0917 PF03764 Elongation factor G, domain IV ABCA12_0917 PF00679 Elongation factor G C-terminus ABCA12_0917 PF03144 Elongation factor Tu domain 2 ABCA12_0917 PF14492 Elongation Factor G, domain II ABCA12_0918 PF03144 Elongation factor Tu domain 2 ABCA12_0918 PF00009 Elongation factor Tu GTP binding domain ABCA12_0918 PF03143 Elongation factor Tu C-terminal domain ABCA12_0921 PF00583 Acetyltransferase (GNAT) family ABCA12_0922 PF04376 Arginine-tRNA-protein transferase, N terminus ABCA12_0922 PF04377 Arginine-tRNA-protein transferase, C terminus ABCA12_0923 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ABCA12_0924 PF13847 Methyltransferase domain ABCA12_0924 PF10119 Predicted methyltransferase regulatory domain ABCA12_0925 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_0926 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ABCA12_0926 PF17854 FtsK alpha domain ABCA12_0926 PF09397 Ftsk gamma domain ABCA12_0926 PF01580 FtsK/SpoIIIE family ABCA12_0927 PF01810 LysE type translocator ABCA12_0929 PF03776 Septum formation topological specificity factor MinE ABCA12_0930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABCA12_0931 PF03775 Septum formation inhibitor MinC, C-terminal domain ABCA12_0933 PF01553 Acyltransferase ABCA12_0934 PF00691 OmpA family ABCA12_0934 PF13488 Glycine zipper ABCA12_0935 PF13361 UvrD-like helicase C-terminal domain ABCA12_0935 PF00580 UvrD/REP helicase N-terminal domain ABCA12_0936 PF00692 dUTPase ABCA12_0937 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABCA12_0937 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABCA12_0937 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABCA12_0937 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABCA12_0938 PF00696 Amino acid kinase family ABCA12_0940 PF13230 Glutamine amidotransferases class-II ABCA12_0941 PF01814 Hemerythrin HHE cation binding domain ABCA12_0943 PF03658 RnfH family Ubiquitin ABCA12_0944 PF04355 SmpA / OmlA family ABCA12_0945 PF01475 Ferric uptake regulator family ABCA12_0946 PF00437 Type II/IV secretion system protein ABCA12_0947 PF00437 Type II/IV secretion system protein ABCA12_0948 PF01168 Alanine racemase, N-terminal domain ABCA12_0950 PF00149 Calcineurin-like phosphoesterase ABCA12_0950 PF12320 Type 5 capsule protein repressor C-terminal domain ABCA12_0956 PF00378 Enoyl-CoA hydratase/isomerase ABCA12_0961 PF08338 Domain of unknown function (DUF1731) ABCA12_0961 PF01370 NAD dependent epimerase/dehydratase family ABCA12_0962 PF01266 FAD dependent oxidoreductase ABCA12_0963 PF00490 Delta-aminolevulinic acid dehydratase ABCA12_0964 PF03061 Thioesterase superfamily ABCA12_0965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCA12_0965 PF00529 HlyD membrane-fusion protein of T1SS ABCA12_0966 PF07690 Major Facilitator Superfamily ABCA12_0968 PF09278 MerR, DNA binding ABCA12_0968 PF00376 MerR family regulatory protein ABCA12_0969 PF00403 Heavy-metal-associated domain ABCA12_0970 PF00436 Single-strand binding protein family ABCA12_0978 PF00589 Phage integrase family ABCA12_0978 PF13356 Arm DNA-binding domain ABCA12_0979 PF00005 ABC transporter ABCA12_0984 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABCA12_0984 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABCA12_0985 PF00202 Aminotransferase class-III ABCA12_0986 PF04958 Arginine N-succinyltransferase beta subunit ABCA12_0987 PF00171 Aldehyde dehydrogenase family ABCA12_0988 PF04996 Succinylarginine dihydrolase ABCA12_0989 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ABCA12_0991 PF00324 Amino acid permease ABCA12_0994 PF13817 IS66 C-terminal element ABCA12_0994 PF13007 Transposase C of IS166 homeodomain ABCA12_0994 PF03050 Transposase IS66 family ABCA12_0994 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_0995 PF08212 Lipocalin-like domain ABCA12_0996 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ABCA12_0998 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_1000 PF02583 Metal-sensitive transcriptional repressor ABCA12_1001 PF16916 Dimerisation domain of Zinc Transporter ABCA12_1001 PF01545 Cation efflux family ABCA12_1002 PF02417 Chromate transporter ABCA12_1003 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABCA12_1004 PF00005 ABC transporter ABCA12_1005 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_1006 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ABCA12_1007 PF00582 Universal stress protein family ABCA12_1011 PF01327 Polypeptide deformylase ABCA12_1012 PF04480 Protein of unknown function (DUF559) ABCA12_1014 PF00809 Pterin binding enzyme ABCA12_1014 PF02574 Homocysteine S-methyltransferase ABCA12_1014 PF02310 B12 binding domain ABCA12_1014 PF02607 B12 binding domain ABCA12_1014 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABCA12_1015 PF01384 Phosphate transporter family ABCA12_1016 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_1018 PF18073 Rubredoxin metal binding domain ABCA12_1019 PF01235 Sodium:alanine symporter family ABCA12_1020 PF00324 Amino acid permease ABCA12_1022 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABCA12_1022 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABCA12_1023 PF01678 Diaminopimelate epimerase ABCA12_1026 PF01810 LysE type translocator ABCA12_1027 PF02899 Phage integrase, N-terminal SAM-like domain ABCA12_1027 PF00589 Phage integrase family ABCA12_1028 PF01012 Electron transfer flavoprotein domain ABCA12_1029 PF01012 Electron transfer flavoprotein domain ABCA12_1029 PF00766 Electron transfer flavoprotein FAD-binding domain ABCA12_1032 PF00521 DNA gyrase/topoisomerase IV, subunit A ABCA12_1032 PF03989 DNA gyrase C-terminal domain, beta-propeller ABCA12_1035 PF13533 Biotin-lipoyl like ABCA12_1037 PF00266 Aminotransferase class-V ABCA12_1040 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABCA12_1043 PF02687 FtsX-like permease family ABCA12_1043 PF12704 MacB-like periplasmic core domain ABCA12_1044 PF00005 ABC transporter ABCA12_1046 PF03772 Competence protein ABCA12_1046 PF00753 Metallo-beta-lactamase superfamily ABCA12_1046 PF13567 Domain of unknown function (DUF4131) ABCA12_1048 PF01343 Peptidase family S49 ABCA12_1048 PF06965 Na+/H+ antiporter 1 ABCA12_1050 PF00551 Formyl transferase ABCA12_1051 PF00586 AIR synthase related protein, N-terminal domain ABCA12_1051 PF02769 AIR synthase related protein, C-terminal domain ABCA12_1052 PF01594 AI-2E family transporter ABCA12_1053 PF08299 Bacterial dnaA protein helix-turn-helix ABCA12_1053 PF11638 DnaA N-terminal domain ABCA12_1053 PF00308 Bacterial dnaA protein ABCA12_1059 PF00588 SpoU rRNA Methylase family ABCA12_1059 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABCA12_1060 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ABCA12_1062 PF00691 OmpA family ABCA12_1063 PF07676 WD40-like Beta Propeller Repeat ABCA12_1063 PF04052 TolB amino-terminal domain ABCA12_1065 PF02472 Biopolymer transport protein ExbD/TolR ABCA12_1066 PF01618 MotA/TolQ/ExbB proton channel family ABCA12_1067 PF03061 Thioesterase superfamily ABCA12_1069 PF05491 RuvB C-terminal winged helix domain ABCA12_1069 PF17864 RuvB AAA lid domain ABCA12_1069 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABCA12_1070 PF07499 RuvA, C-terminal domain ABCA12_1070 PF01330 RuvA N terminal domain ABCA12_1071 PF01966 HD domain ABCA12_1072 PF02769 AIR synthase related protein, C-terminal domain ABCA12_1072 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABCA12_1072 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ABCA12_1073 PF07690 Major Facilitator Superfamily ABCA12_1077 PF13359 DDE superfamily endonuclease ABCA12_1077 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_1078 PF01784 NIF3 (NGG1p interacting factor 3) ABCA12_1079 PF00881 Nitroreductase family ABCA12_1080 PF00378 Enoyl-CoA hydratase/isomerase ABCA12_1081 PF00293 NUDIX domain ABCA12_1081 PF01467 Cytidylyltransferase-like ABCA12_1084 PF00578 AhpC/TSA family ABCA12_1087 PF06508 Queuosine biosynthesis protein QueC ABCA12_1088 PF04055 Radical SAM superfamily ABCA12_1089 PF14602 Hexapeptide repeat of succinyl-transferase ABCA12_1089 PF00132 Bacterial transferase hexapeptide (six repeats) ABCA12_1089 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ABCA12_1091 PF03466 LysR substrate binding domain ABCA12_1091 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_1092 PF00005 ABC transporter ABCA12_1092 PF12857 TOBE-like domain ABCA12_1093 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_1094 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_1097 PF01063 Amino-transferase class IV ABCA12_1098 PF02618 YceG-like family ABCA12_1099 PF02223 Thymidylate kinase ABCA12_1100 PF00890 FAD binding domain ABCA12_1100 PF02910 Fumarate reductase flavoprotein C-term ABCA12_1101 PF13180 PDZ domain ABCA12_1103 PF06421 GTP-binding protein LepA C-terminus ABCA12_1103 PF00679 Elongation factor G C-terminus ABCA12_1103 PF00009 Elongation factor Tu GTP binding domain ABCA12_1103 PF03144 Elongation factor Tu domain 2 ABCA12_1104 PF10502 Signal peptidase, peptidase S26 ABCA12_1106 PF00035 Double-stranded RNA binding motif ABCA12_1106 PF14622 Ribonuclease-III-like ABCA12_1107 PF07650 KH domain ABCA12_1107 PF01926 50S ribosome-binding GTPase ABCA12_1109 PF11967 Recombination protein O N terminal ABCA12_1109 PF02565 Recombination protein O C terminal ABCA12_1110 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ABCA12_1111 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ABCA12_1113 PF00155 Aminotransferase class I and II ABCA12_1115 PF05922 Peptidase inhibitor I9 ABCA12_1115 PF00082 Subtilase family ABCA12_1117 PF00106 short chain dehydrogenase ABCA12_1118 PF00271 Helicase conserved C-terminal domain ABCA12_1118 PF17757 UvrB interaction domain ABCA12_1118 PF12344 Ultra-violet resistance protein B ABCA12_1118 PF02151 UvrB/uvrC motif ABCA12_1118 PF04851 Type III restriction enzyme, res subunit ABCA12_1121 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABCA12_1121 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABCA12_1124 PF01926 50S ribosome-binding GTPase ABCA12_1124 PF01018 GTP1/OBG ABCA12_1125 PF01018 GTP1/OBG ABCA12_1125 PF01926 50S ribosome-binding GTPase ABCA12_1126 PF00696 Amino acid kinase family ABCA12_1126 PF01472 PUA domain ABCA12_1128 PF07759 Protein of unknown function (DUF1615) ABCA12_1129 PF01207 Dihydrouridine synthase (Dus) ABCA12_1130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_1130 PF03466 LysR substrate binding domain ABCA12_1131 PF00561 alpha/beta hydrolase fold ABCA12_1132 PF18113 Rubredoxin binding C-terminal domain ABCA12_1132 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_1133 PF00301 Rubredoxin ABCA12_1135 PF00152 tRNA synthetases class II (D, K and N) ABCA12_1135 PF01336 OB-fold nucleic acid binding domain ABCA12_1136 PF14052 Capsule assembly protein Wzi ABCA12_1138 PF01507 Phosphoadenosine phosphosulfate reductase family ABCA12_1139 PF00009 Elongation factor Tu GTP binding domain ABCA12_1141 PF16320 Ribosomal protein L7/L12 dimerisation domain ABCA12_1141 PF00542 Ribosomal protein L7/L12 C-terminal domain ABCA12_1142 PF01595 Cyclin M transmembrane N-terminal domain ABCA12_1142 PF03471 Transporter associated domain ABCA12_1142 PF00571 CBS domain ABCA12_1143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_1143 PF03466 LysR substrate binding domain ABCA12_1144 PF00463 Isocitrate lyase family ABCA12_1146 PF01406 tRNA synthetases class I (C) catalytic domain ABCA12_1146 PF09190 DALR domain ABCA12_1147 PF00571 CBS domain ABCA12_1147 PF01380 SIS domain ABCA12_1150 PF03968 OstA-like protein ABCA12_1151 PF12399 Branched-chain amino acid ATP-binding cassette transporter ABCA12_1151 PF00005 ABC transporter ABCA12_1155 PF02321 Outer membrane efflux protein ABCA12_1156 PF00664 ABC transporter transmembrane region ABCA12_1156 PF00005 ABC transporter ABCA12_1156 PF03412 Peptidase C39 family ABCA12_1158 PF09186 Domain of unknown function (DUF1949) ABCA12_1158 PF01205 Uncharacterized protein family UPF0029 ABCA12_1159 PF00132 Bacterial transferase hexapeptide (six repeats) ABCA12_1161 PF01596 O-methyltransferase ABCA12_1163 PF11953 Domain of unknown function (DUF3470) ABCA12_1163 PF00037 4Fe-4S binding domain ABCA12_1164 PF05190 MutS family domain IV ABCA12_1164 PF05192 MutS domain III ABCA12_1164 PF05188 MutS domain II ABCA12_1164 PF00488 MutS domain V ABCA12_1164 PF01624 MutS domain I ABCA12_1165 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_1168 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_1168 PF13359 DDE superfamily endonuclease ABCA12_1172 PF00005 ABC transporter ABCA12_1173 PF02705 K+ potassium transporter ABCA12_1174 PF03741 Integral membrane protein TerC family ABCA12_1174 PF03471 Transporter associated domain ABCA12_1175 PF01098 Cell cycle protein ABCA12_1176 PF00665 Integrase core domain ABCA12_1176 PF13276 HTH-like domain ABCA12_1176 PF13333 Integrase core domain ABCA12_1177 PF01527 Transposase ABCA12_1178 PF01098 Cell cycle protein ABCA12_1181 PF09297 NADH pyrophosphatase zinc ribbon domain ABCA12_1181 PF00293 NUDIX domain ABCA12_1182 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_1182 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_1182 PF00672 HAMP domain ABCA12_1183 PF00072 Response regulator receiver domain ABCA12_1183 PF00486 Transcriptional regulatory protein, C terminal ABCA12_1185 PF00576 HIUase/Transthyretin family ABCA12_1188 PF00717 Peptidase S24-like ABCA12_1189 PF11799 impB/mucB/samB family C-terminal domain ABCA12_1189 PF11798 IMS family HHH motif ABCA12_1189 PF13438 Domain of unknown function (DUF4113) ABCA12_1189 PF00817 impB/mucB/samB family ABCA12_1193 PF12706 Beta-lactamase superfamily domain ABCA12_1195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABCA12_1195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABCA12_1196 PF01553 Acyltransferase ABCA12_1197 PF01435 Peptidase family M48 ABCA12_1200 PF09424 Yqey-like protein ABCA12_1201 PF01165 Ribosomal protein S21 ABCA12_1202 PF00814 Glycoprotease family ABCA12_1204 PF00892 EamA-like transporter family ABCA12_1208 PF00069 Protein kinase domain ABCA12_1208 PF03793 PASTA domain ABCA12_1209 PF01614 Bacterial transcriptional regulator ABCA12_1209 PF09339 IclR helix-turn-helix domain ABCA12_1210 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_1210 PF14759 Reductase C-terminal ABCA12_1212 PF12697 Alpha/beta hydrolase family ABCA12_1215 PF01958 Domain of unknown function DUF108 ABCA12_1215 PF03447 Homoserine dehydrogenase, NAD binding domain ABCA12_1218 PF00205 Thiamine pyrophosphate enzyme, central domain ABCA12_1218 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABCA12_1218 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABCA12_1221 PF01638 HxlR-like helix-turn-helix ABCA12_1224 PF00206 Lyase ABCA12_1224 PF08328 Adenylosuccinate lyase C-terminal ABCA12_1225 PF04356 Protein of unknown function (DUF489) ABCA12_1227 PF00293 NUDIX domain ABCA12_1229 PF00132 Bacterial transferase hexapeptide (six repeats) ABCA12_1230 PF07943 Penicillin-binding protein 5, C-terminal domain ABCA12_1230 PF00768 D-alanyl-D-alanine carboxypeptidase ABCA12_1233 PF01975 Survival protein SurE ABCA12_1234 PF01551 Peptidase family M23 ABCA12_1234 PF01476 LysM domain ABCA12_1237 PF13654 AAA domain ABCA12_1237 PF05362 Lon protease (S16) C-terminal proteolytic domain ABCA12_1239 PF07690 Major Facilitator Superfamily ABCA12_1240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABCA12_1241 PF13593 SBF-like CPA transporter family (DUF4137) ABCA12_1242 PF01197 Ribosomal protein L31 ABCA12_1245 PF04055 Radical SAM superfamily ABCA12_1246 PF08207 Elongation factor P (EF-P) KOW-like domain ABCA12_1246 PF01132 Elongation factor P (EF-P) OB domain ABCA12_1246 PF09285 Elongation factor P, C-terminal ABCA12_1247 PF02554 Carbon starvation protein CstA ABCA12_1247 PF13722 5TM C-terminal transporter carbon starvation CstA ABCA12_1248 PF04328 Selenoprotein, putative ABCA12_1249 PF17863 AAA lid domain ABCA12_1249 PF07726 ATPase family associated with various cellular activities (AAA) ABCA12_1251 PF11992 Domain of unknown function (DUF3488) ABCA12_1251 PF01841 Transglutaminase-like superfamily ABCA12_1251 PF13559 Domain of unknown function (DUF4129) ABCA12_1259 PF17954 Quercetinase C-terminal cupin domain ABCA12_1259 PF02678 Pirin ABCA12_1260 PF00764 Arginosuccinate synthase ABCA12_1261 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCA12_1261 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_1269 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_1269 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_1269 PF09317 Domain of unknown function (DUF1974) ABCA12_1269 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_1270 PF02954 Bacterial regulatory protein, Fis family ABCA12_1270 PF00158 Sigma-54 interaction domain ABCA12_1270 PF13185 GAF domain ABCA12_1271 PF00753 Metallo-beta-lactamase superfamily ABCA12_1273 PF01925 Sulfite exporter TauE/SafE ABCA12_1279 PF13649 Methyltransferase domain ABCA12_1280 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_1280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_1280 PF08521 Two-component sensor kinase N-terminal ABCA12_1281 PF00486 Transcriptional regulatory protein, C terminal ABCA12_1281 PF00072 Response regulator receiver domain ABCA12_1286 PF00576 HIUase/Transthyretin family ABCA12_1291 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_1293 PF01494 FAD binding domain ABCA12_1295 PF07729 FCD domain ABCA12_1295 PF00392 Bacterial regulatory proteins, gntR family ABCA12_1296 PF03561 Allantoicase repeat ABCA12_1297 PF04115 Ureidoglycolate lyase ABCA12_1298 PF04115 Ureidoglycolate lyase ABCA12_1300 PF09084 NMT1/THI5 like ABCA12_1301 PF00005 ABC transporter ABCA12_1303 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_1304 PF01979 Amidohydrolase family ABCA12_1308 PF00355 Rieske [2Fe-2S] domain ABCA12_1309 PF07702 UTRA domain ABCA12_1309 PF00392 Bacterial regulatory proteins, gntR family ABCA12_1310 PF05962 HutD ABCA12_1311 PF17392 Urocanase C-terminal domain ABCA12_1311 PF17391 Urocanase N-terminal domain ABCA12_1311 PF01175 Urocanase Rossmann-like domain ABCA12_1312 PF00221 Aromatic amino acid lyase ABCA12_1313 PF00324 Amino acid permease ABCA12_1314 PF01979 Amidohydrolase family ABCA12_1315 PF00491 Arginase family ABCA12_1316 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABCA12_1316 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABCA12_1319 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABCA12_1319 PF12833 Helix-turn-helix domain ABCA12_1320 PF00155 Aminotransferase class I and II ABCA12_1320 PF00392 Bacterial regulatory proteins, gntR family ABCA12_1325 PF00440 Bacterial regulatory proteins, tetR family ABCA12_1325 PF17932 Tetracyclin repressor-like, C-terminal domain ABCA12_1328 PF00106 short chain dehydrogenase ABCA12_1329 PF00743 Flavin-binding monooxygenase-like ABCA12_1330 PF04072 Leucine carboxyl methyltransferase ABCA12_1331 PF03746 LamB/YcsF family ABCA12_1332 PF02626 Carboxyltransferase domain, subdomain A and B ABCA12_1333 PF00289 Biotin carboxylase, N-terminal domain ABCA12_1333 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCA12_1333 PF02785 Biotin carboxylase C-terminal domain ABCA12_1333 PF00364 Biotin-requiring enzyme ABCA12_1334 PF01435 Peptidase family M48 ABCA12_1335 PF13545 Crp-like helix-turn-helix domain ABCA12_1335 PF00027 Cyclic nucleotide-binding domain ABCA12_1336 PF02566 OsmC-like protein ABCA12_1338 PF02861 Clp amino terminal domain, pathogenicity island component ABCA12_1338 PF17871 AAA lid domain ABCA12_1338 PF07724 AAA domain (Cdc48 subfamily) ABCA12_1338 PF00004 ATPase family associated with various cellular activities (AAA) ABCA12_1338 PF10431 C-terminal, D2-small domain, of ClpB protein ABCA12_1340 PF02926 THUMP domain ABCA12_1340 PF10672 S-adenosylmethionine-dependent methyltransferase ABCA12_1340 PF01170 Putative RNA methylase family UPF0020 ABCA12_1342 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABCA12_1342 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABCA12_1343 PF01979 Amidohydrolase family ABCA12_1346 PF02390 Putative methyltransferase ABCA12_1348 PF00043 Glutathione S-transferase, C-terminal domain ABCA12_1348 PF02798 Glutathione S-transferase, N-terminal domain ABCA12_1350 PF13192 Thioredoxin domain ABCA12_1350 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_1353 PF00487 Fatty acid desaturase ABCA12_1355 PF00578 AhpC/TSA family ABCA12_1355 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABCA12_1357 PF11898 Domain of unknown function (DUF3418) ABCA12_1357 PF04408 Helicase associated domain (HA2) ABCA12_1357 PF00271 Helicase conserved C-terminal domain ABCA12_1357 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ABCA12_1357 PF00270 DEAD/DEAH box helicase ABCA12_1361 PF04055 Radical SAM superfamily ABCA12_1362 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_1362 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABCA12_1365 PF05036 Sporulation related domain ABCA12_1365 PF03330 Lytic transglycolase ABCA12_1366 PF13406 Transglycosylase SLT domain ABCA12_1367 PF01098 Cell cycle protein ABCA12_1369 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ABCA12_1369 PF14489 QueF-like protein ABCA12_1370 PF01061 ABC-2 type transporter ABCA12_1371 PF00005 ABC transporter ABCA12_1376 PF00149 Calcineurin-like phosphoesterase ABCA12_1377 PF00665 Integrase core domain ABCA12_1377 PF13276 HTH-like domain ABCA12_1380 PF02661 Fic/DOC family ABCA12_1380 PF13784 Fic/DOC family N-terminal ABCA12_1381 PF02652 L-lactate permease ABCA12_1382 PF00392 Bacterial regulatory proteins, gntR family ABCA12_1382 PF07729 FCD domain ABCA12_1383 PF01070 FMN-dependent dehydrogenase ABCA12_1384 PF01565 FAD binding domain ABCA12_1384 PF09330 D-lactate dehydrogenase, membrane binding ABCA12_1387 PF00107 Zinc-binding dehydrogenase ABCA12_1387 PF08240 Alcohol dehydrogenase GroES-like domain ABCA12_1388 PF00106 short chain dehydrogenase ABCA12_1389 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_1389 PF03466 LysR substrate binding domain ABCA12_1390 PF00107 Zinc-binding dehydrogenase ABCA12_1390 PF08240 Alcohol dehydrogenase GroES-like domain ABCA12_1391 PF00109 Beta-ketoacyl synthase, N-terminal domain ABCA12_1391 PF00550 Phosphopantetheine attachment site ABCA12_1391 PF08659 KR domain ABCA12_1391 PF16197 Ketoacyl-synthetase C-terminal extension ABCA12_1391 PF14765 Polyketide synthase dehydratase ABCA12_1391 PF08240 Alcohol dehydrogenase GroES-like domain ABCA12_1391 PF02801 Beta-ketoacyl synthase, C-terminal domain ABCA12_1391 PF00698 Acyl transferase domain ABCA12_1391 PF00107 Zinc-binding dehydrogenase ABCA12_1392 PF02583 Metal-sensitive transcriptional repressor ABCA12_1393 PF08240 Alcohol dehydrogenase GroES-like domain ABCA12_1393 PF00107 Zinc-binding dehydrogenase ABCA12_1394 PF00756 Putative esterase ABCA12_1396 PF00465 Iron-containing alcohol dehydrogenase ABCA12_1399 PF16925 Tetracyclin repressor-like, C-terminal domain ABCA12_1399 PF00440 Bacterial regulatory proteins, tetR family ABCA12_1403 PF13276 HTH-like domain ABCA12_1403 PF00665 Integrase core domain ABCA12_1403 PF13333 Integrase core domain ABCA12_1405 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_1411 PF00419 Fimbrial protein ABCA12_1412 PF00577 Outer membrane usher protein ABCA12_1412 PF13954 PapC N-terminal domain ABCA12_1412 PF13953 PapC C-terminal domain ABCA12_1414 PF02753 Pili assembly chaperone PapD, C-terminal domain ABCA12_1414 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ABCA12_1415 PF16970 Type-1 fimbrial protein, A ABCA12_1416 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_1419 PF06968 Biotin and Thiamin Synthesis associated domain ABCA12_1419 PF04055 Radical SAM superfamily ABCA12_1420 PF08331 Domain of unknown function (DUF1730) ABCA12_1421 PF03853 YjeF-related protein N-terminus ABCA12_1421 PF01256 Carbohydrate kinase ABCA12_1422 PF02075 Crossover junction endodeoxyribonuclease RuvC ABCA12_1424 PF00313 'Cold-shock' DNA-binding domain ABCA12_1432 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABCA12_1432 PF02772 S-adenosylmethionine synthetase, central domain ABCA12_1432 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABCA12_1433 PF02779 Transketolase, pyrimidine binding domain ABCA12_1433 PF02780 Transketolase, C-terminal domain ABCA12_1433 PF00456 Transketolase, thiamine diphosphate binding domain ABCA12_1435 PF04264 YceI-like domain ABCA12_1437 PF09857 Putative toxin of bacterial toxin-antitoxin pair ABCA12_1438 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABCA12_1440 PF09992 Phosphodiester glycosidase ABCA12_1442 PF05958 tRNA (Uracil-5-)-methyltransferase ABCA12_1444 PF00171 Aldehyde dehydrogenase family ABCA12_1444 PF01619 Proline dehydrogenase ABCA12_1444 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ABCA12_1444 PF14850 DNA-binding domain of Proline dehydrogenase ABCA12_1445 PF01037 Lrp/AsnC ligand binding domain ABCA12_1446 PF00474 Sodium:solute symporter family ABCA12_1447 PF01597 Glycine cleavage H-protein ABCA12_1448 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABCA12_1448 PF12833 Helix-turn-helix domain ABCA12_1450 PF00005 ABC transporter ABCA12_1450 PF00664 ABC transporter transmembrane region ABCA12_1453 PF00924 Mechanosensitive ion channel ABCA12_1454 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ABCA12_1456 PF00375 Sodium:dicarboxylate symporter family ABCA12_1457 PF00916 Sulfate permease family ABCA12_1457 PF01740 STAS domain ABCA12_1460 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_1460 PF13359 DDE superfamily endonuclease ABCA12_1463 PF08007 Cupin superfamily protein ABCA12_1464 PF12170 DNA polymerase III tau subunit V interacting with alpha ABCA12_1464 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ABCA12_1464 PF12169 DNA polymerase III subunits gamma and tau domain III ABCA12_1465 PF03061 Thioesterase superfamily ABCA12_1466 PF00465 Iron-containing alcohol dehydrogenase ABCA12_1467 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABCA12_1468 PF01565 FAD binding domain ABCA12_1468 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABCA12_1474 PF01645 Conserved region in glutamate synthase ABCA12_1475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABCA12_1478 PF14497 Glutathione S-transferase, C-terminal domain ABCA12_1478 PF02798 Glutathione S-transferase, N-terminal domain ABCA12_1480 PF00324 Amino acid permease ABCA12_1481 PF12832 MFS_1 like family ABCA12_1482 PF01425 Amidase ABCA12_1484 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCA12_1484 PF02785 Biotin carboxylase C-terminal domain ABCA12_1484 PF00289 Biotin carboxylase, N-terminal domain ABCA12_1485 PF00364 Biotin-requiring enzyme ABCA12_1486 PF01220 Dehydroquinase class II ABCA12_1487 PF00005 ABC transporter ABCA12_1489 PF07690 Major Facilitator Superfamily ABCA12_1490 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABCA12_1490 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABCA12_1490 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABCA12_1490 PF13806 Rieske-like [2Fe-2S] domain ABCA12_1490 PF04324 BFD-like [2Fe-2S] binding domain ABCA12_1490 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_1491 PF04324 BFD-like [2Fe-2S] binding domain ABCA12_1491 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABCA12_1491 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABCA12_1491 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_1491 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABCA12_1492 PF04324 BFD-like [2Fe-2S] binding domain ABCA12_1492 PF01568 Molydopterin dinucleotide binding domain ABCA12_1492 PF00384 Molybdopterin oxidoreductase ABCA12_1492 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABCA12_1493 PF12804 MobA-like NTP transferase domain ABCA12_1494 PF00291 Pyridoxal-phosphate dependent enzyme ABCA12_1497 PF04055 Radical SAM superfamily ABCA12_1497 PF06463 Molybdenum Cofactor Synthesis C ABCA12_1500 PF02391 MoaE protein ABCA12_1501 PF00994 Probable molybdopterin binding domain ABCA12_1501 PF01967 MoaC family ABCA12_1502 PF00994 Probable molybdopterin binding domain ABCA12_1502 PF03454 MoeA C-terminal region (domain IV) ABCA12_1502 PF03453 MoeA N-terminal region (domain I and II) ABCA12_1503 PF01638 HxlR-like helix-turn-helix ABCA12_1507 PF02635 DsrE/DsrF-like family ABCA12_1508 PF16363 GDP-mannose 4,6 dehydratase ABCA12_1509 PF00206 Lyase ABCA12_1509 PF10415 Fumarase C C-terminus ABCA12_1512 PF01266 FAD dependent oxidoreductase ABCA12_1514 PF02542 YgbB family ABCA12_1516 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABCA12_1516 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABCA12_1517 PF00440 Bacterial regulatory proteins, tetR family ABCA12_1518 PF02954 Bacterial regulatory protein, Fis family ABCA12_1518 PF00072 Response regulator receiver domain ABCA12_1518 PF00158 Sigma-54 interaction domain ABCA12_1519 PF00989 PAS fold ABCA12_1519 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_1519 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_1520 PF04055 Radical SAM superfamily ABCA12_1520 PF18693 TRAM domain ABCA12_1520 PF00919 Uncharacterized protein family UPF0004 ABCA12_1521 PF00696 Amino acid kinase family ABCA12_1522 PF01765 Ribosome recycling factor ABCA12_1523 PF01255 Putative undecaprenyl diphosphate synthase ABCA12_1525 PF13288 DXP reductoisomerase C-terminal domain ABCA12_1525 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABCA12_1525 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABCA12_1526 PF13180 PDZ domain ABCA12_1526 PF02163 Peptidase family M50 ABCA12_1526 PF17820 PDZ domain ABCA12_1527 PF01103 Surface antigen ABCA12_1527 PF07244 Surface antigen variable number repeat ABCA12_1529 PF00132 Bacterial transferase hexapeptide (six repeats) ABCA12_1529 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ABCA12_1530 PF07977 FabA-like domain ABCA12_1531 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ABCA12_1531 PF00132 Bacterial transferase hexapeptide (six repeats) ABCA12_1532 PF12833 Helix-turn-helix domain ABCA12_1532 PF12852 Cupin ABCA12_1533 PF00487 Fatty acid desaturase ABCA12_1535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABCA12_1535 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_1536 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_1536 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_1536 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_1537 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_1537 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_1537 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_1538 PF03109 ABC1 family ABCA12_1540 PF04073 Aminoacyl-tRNA editing domain ABCA12_1541 PF04183 IucA / IucC family ABCA12_1541 PF06276 Ferric iron reductase FhuF-like transporter ABCA12_1542 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABCA12_1543 PF06276 Ferric iron reductase FhuF-like transporter ABCA12_1543 PF04183 IucA / IucC family ABCA12_1546 PF07690 Major Facilitator Superfamily ABCA12_1547 PF00593 TonB dependent receptor ABCA12_1547 PF07715 TonB-dependent Receptor Plug Domain ABCA12_1549 PF13419 Haloacid dehalogenase-like hydrolase ABCA12_1551 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ABCA12_1552 PF02277 Phosphoribosyltransferase ABCA12_1554 PF02654 Cobalamin-5-phosphate synthase ABCA12_1557 PF13359 DDE superfamily endonuclease ABCA12_1557 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_1560 PF00593 TonB dependent receptor ABCA12_1560 PF07715 TonB-dependent Receptor Plug Domain ABCA12_1562 PF00793 DAHP synthetase I family ABCA12_1563 PF01925 Sulfite exporter TauE/SafE ABCA12_1567 PF02684 Lipid-A-disaccharide synthetase ABCA12_1572 PF01230 HIT domain ABCA12_1574 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABCA12_1574 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABCA12_1576 PF01053 Cys/Met metabolism PLP-dependent enzyme ABCA12_1577 PF02575 YbaB/EbfC DNA-binding family ABCA12_1578 PF02132 RecR protein ABCA12_1578 PF13662 Toprim domain ABCA12_1579 PF01612 3'-5' exonuclease ABCA12_1579 PF00570 HRDC domain ABCA12_1580 PF05166 YcgL domain ABCA12_1582 PF00004 ATPase family associated with various cellular activities (AAA) ABCA12_1582 PF01434 Peptidase family M41 ABCA12_1582 PF17862 AAA+ lid domain ABCA12_1584 PF00291 Pyridoxal-phosphate dependent enzyme ABCA12_1585 PF05175 Methyltransferase small domain ABCA12_1586 PF01264 Chorismate synthase ABCA12_1587 PF00990 Diguanylate cyclase, GGDEF domain ABCA12_1596 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_1600 PF13276 HTH-like domain ABCA12_1600 PF00665 Integrase core domain ABCA12_1600 PF13333 Integrase core domain ABCA12_1602 PF07728 AAA domain (dynein-related subfamily) ABCA12_1603 PF09905 DNA-binding protein VF530 ABCA12_1607 PF01925 Sulfite exporter TauE/SafE ABCA12_1608 PF01613 Flavin reductase like domain ABCA12_1609 PF01717 Cobalamin-independent synthase, Catalytic domain ABCA12_1609 PF08267 Cobalamin-independent synthase, N-terminal domain ABCA12_1611 PF00593 TonB dependent receptor ABCA12_1611 PF07715 TonB-dependent Receptor Plug Domain ABCA12_1613 PF03466 LysR substrate binding domain ABCA12_1613 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_1614 PF01144 Coenzyme A transferase ABCA12_1615 PF01144 Coenzyme A transferase ABCA12_1616 PF00108 Thiolase, N-terminal domain ABCA12_1616 PF02803 Thiolase, C-terminal domain ABCA12_1617 PF07690 Major Facilitator Superfamily ABCA12_1620 PF00501 AMP-binding enzyme ABCA12_1620 PF13193 AMP-binding enzyme C-terminal domain ABCA12_1621 PF00440 Bacterial regulatory proteins, tetR family ABCA12_1622 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_1622 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_1622 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_1625 PF00378 Enoyl-CoA hydratase/isomerase ABCA12_1626 PF18140 Propionyl-coenzyme A carboxylase BT domain ABCA12_1626 PF02785 Biotin carboxylase C-terminal domain ABCA12_1626 PF00364 Biotin-requiring enzyme ABCA12_1626 PF00289 Biotin carboxylase, N-terminal domain ABCA12_1626 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCA12_1627 PF00682 HMGL-like ABCA12_1628 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_1628 PF03466 LysR substrate binding domain ABCA12_1633 PF03050 Transposase IS66 family ABCA12_1633 PF13817 IS66 C-terminal element ABCA12_1633 PF13007 Transposase C of IS166 homeodomain ABCA12_1633 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_1635 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_1636 PF00005 ABC transporter ABCA12_1637 PF09084 NMT1/THI5 like ABCA12_1638 PF08753 NikR C terminal nickel binding domain ABCA12_1638 PF01402 Ribbon-helix-helix protein, copG family ABCA12_1641 PF00289 Biotin carboxylase, N-terminal domain ABCA12_1641 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCA12_1641 PF02785 Biotin carboxylase C-terminal domain ABCA12_1644 PF01037 Lrp/AsnC ligand binding domain ABCA12_1651 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding ABCA12_1651 PF18381 YcaO cyclodehydratase C-terminal domain ABCA12_1653 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_1653 PF03466 LysR substrate binding domain ABCA12_1654 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABCA12_1654 PF13378 Enolase C-terminal domain-like ABCA12_1655 PF02426 Muconolactone delta-isomerase ABCA12_1656 PF04444 Catechol dioxygenase N terminus ABCA12_1656 PF00775 Dioxygenase ABCA12_1657 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ABCA12_1657 PF00355 Rieske [2Fe-2S] domain ABCA12_1658 PF00866 Ring hydroxylating beta subunit ABCA12_1659 PF00175 Oxidoreductase NAD-binding domain ABCA12_1659 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCA12_1659 PF00970 Oxidoreductase FAD-binding domain ABCA12_1660 PF00106 short chain dehydrogenase ABCA12_1661 PF03594 Benzoate membrane transport protein ABCA12_1662 PF01144 Coenzyme A transferase ABCA12_1663 PF01144 Coenzyme A transferase ABCA12_1664 PF00108 Thiolase, N-terminal domain ABCA12_1664 PF02803 Thiolase, C-terminal domain ABCA12_1665 PF12146 Serine aminopeptidase, S33 ABCA12_1667 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_1667 PF13359 DDE superfamily endonuclease ABCA12_1668 PF07690 Major Facilitator Superfamily ABCA12_1670 PF00465 Iron-containing alcohol dehydrogenase ABCA12_1672 PF00171 Aldehyde dehydrogenase family ABCA12_1674 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABCA12_1674 PF02558 Ketopantoate reductase PanE/ApbA ABCA12_1675 PF01965 DJ-1/PfpI family ABCA12_1676 PF00107 Zinc-binding dehydrogenase ABCA12_1676 PF08240 Alcohol dehydrogenase GroES-like domain ABCA12_1677 PF06719 AraC-type transcriptional regulator N-terminus ABCA12_1677 PF12833 Helix-turn-helix domain ABCA12_1679 PF00392 Bacterial regulatory proteins, gntR family ABCA12_1679 PF07729 FCD domain ABCA12_1680 PF02785 Biotin carboxylase C-terminal domain ABCA12_1680 PF00289 Biotin carboxylase, N-terminal domain ABCA12_1680 PF00364 Biotin-requiring enzyme ABCA12_1680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCA12_1681 PF01425 Amidase ABCA12_1682 PF13276 HTH-like domain ABCA12_1682 PF13333 Integrase core domain ABCA12_1682 PF00665 Integrase core domain ABCA12_1685 PF00753 Metallo-beta-lactamase superfamily ABCA12_1687 PF04143 Sulphur transport ABCA12_1689 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABCA12_1690 PF04977 Septum formation initiator ABCA12_1691 PF03952 Enolase, N-terminal domain ABCA12_1691 PF00113 Enolase, C-terminal TIM barrel domain ABCA12_1692 PF00793 DAHP synthetase I family ABCA12_1693 PF06418 CTP synthase N-terminus ABCA12_1693 PF00117 Glutamine amidotransferase class-I ABCA12_1700 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_1700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCA12_1702 PF12697 Alpha/beta hydrolase family ABCA12_1704 PF00793 DAHP synthetase I family ABCA12_1705 PF16326 ABC transporter C-terminal domain ABCA12_1705 PF12848 ABC transporter ABCA12_1705 PF00005 ABC transporter ABCA12_1706 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ABCA12_1707 PF00004 ATPase family associated with various cellular activities (AAA) ABCA12_1707 PF07724 AAA domain (Cdc48 subfamily) ABCA12_1707 PF17871 AAA lid domain ABCA12_1707 PF02861 Clp amino terminal domain, pathogenicity island component ABCA12_1707 PF10431 C-terminal, D2-small domain, of ClpB protein ABCA12_1709 PF02617 ATP-dependent Clp protease adaptor protein ClpS ABCA12_1711 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABCA12_1711 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABCA12_1714 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABCA12_1715 PF00585 C-terminal regulatory domain of Threonine dehydratase ABCA12_1715 PF00291 Pyridoxal-phosphate dependent enzyme ABCA12_1716 PF02080 TrkA-C domain ABCA12_1716 PF02254 TrkA-N domain ABCA12_1717 PF02386 Cation transport protein ABCA12_1719 PF02253 Phospholipase A1 ABCA12_1720 PF00675 Insulinase (Peptidase family M16) ABCA12_1720 PF05193 Peptidase M16 inactive domain ABCA12_1720 PF08367 Peptidase M16C associated ABCA12_1721 PF00294 pfkB family carbohydrate kinase ABCA12_1725 PF01654 Cytochrome bd terminal oxidase subunit I ABCA12_1726 PF02322 Cytochrome bd terminal oxidase subunit II ABCA12_1730 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ABCA12_1733 PF02881 SRP54-type protein, helical bundle domain ABCA12_1733 PF00448 SRP54-type protein, GTPase domain ABCA12_1738 PF00571 CBS domain ABCA12_1738 PF01380 SIS domain ABCA12_1739 PF00202 Aminotransferase class-III ABCA12_1740 PF00462 Glutaredoxin ABCA12_1742 PF02824 TGS domain ABCA12_1742 PF04607 Region found in RelA / SpoT proteins ABCA12_1742 PF13291 ACT domain ABCA12_1743 PF03466 LysR substrate binding domain ABCA12_1743 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_1744 PF00557 Metallopeptidase family M24 ABCA12_1745 PF05525 Branched-chain amino acid transport protein ABCA12_1751 PF01274 Malate synthase ABCA12_1752 PF03969 AFG1-like ATPase ABCA12_1754 PF00743 Flavin-binding monooxygenase-like ABCA12_1756 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABCA12_1760 PF13007 Transposase C of IS166 homeodomain ABCA12_1760 PF13817 IS66 C-terminal element ABCA12_1760 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_1760 PF03050 Transposase IS66 family ABCA12_1762 PF00216 Bacterial DNA-binding protein ABCA12_1763 PF00575 S1 RNA binding domain ABCA12_1764 PF02224 Cytidylate kinase ABCA12_1766 PF14437 MafB19-like deaminase ABCA12_1768 PF03167 Uracil DNA glycosylase superfamily ABCA12_1770 PF03934 Type II secretion system (T2SS), protein K ABCA12_1775 PF07963 Prokaryotic N-terminal methylation motif ABCA12_1777 PF01026 TatD related DNase ABCA12_1779 PF09115 DNA polymerase III, delta subunit, C terminal ABCA12_1780 PF02348 Cytidylyltransferase ABCA12_1781 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ABCA12_1782 PF00664 ABC transporter transmembrane region ABCA12_1782 PF00005 ABC transporter ABCA12_1784 PF01618 MotA/TolQ/ExbB proton channel family ABCA12_1785 PF17762 HTH domain found in ParB protein ABCA12_1785 PF02195 ParB-like nuclease domain ABCA12_1786 PF13614 AAA domain ABCA12_1787 PF02527 rRNA small subunit methyltransferase G ABCA12_1788 PF00483 Nucleotidyl transferase ABCA12_1789 PF01636 Phosphotransferase enzyme family ABCA12_1790 PF04453 LPS transport system D ABCA12_1790 PF03968 OstA-like protein ABCA12_1791 PF09312 SurA N-terminal domain ABCA12_1791 PF00639 PPIC-type PPIASE domain ABCA12_1792 PF01116 Fructose-bisphosphate aldolase class-II ABCA12_1793 PF00270 DEAD/DEAH box helicase ABCA12_1793 PF00271 Helicase conserved C-terminal domain ABCA12_1794 PF00313 'Cold-shock' DNA-binding domain ABCA12_1796 PF04545 Sigma-70, region 4 ABCA12_1796 PF04542 Sigma-70 region 2 ABCA12_1796 PF00140 Sigma-70 factor, region 1.2 ABCA12_1799 PF05690 Thiazole biosynthesis protein ThiG ABCA12_1804 PF03883 Peroxide stress protein YaaA ABCA12_1807 PF00158 Sigma-54 interaction domain ABCA12_1807 PF06956 Regulator of RNA terminal phosphate cyclase ABCA12_1808 PF00753 Metallo-beta-lactamase superfamily ABCA12_1809 PF00753 Metallo-beta-lactamase superfamily ABCA12_1810 PF01139 tRNA-splicing ligase RtcB ABCA12_1813 PF01137 RNA 3'-terminal phosphate cyclase ABCA12_1813 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain ABCA12_1814 PF01546 Peptidase family M20/M25/M40 ABCA12_1814 PF07687 Peptidase dimerisation domain ABCA12_1816 PF01527 Transposase ABCA12_1817 PF13333 Integrase core domain ABCA12_1817 PF00665 Integrase core domain ABCA12_1817 PF13276 HTH-like domain ABCA12_1818 PF03781 Sulfatase-modifying factor enzyme 1 ABCA12_1820 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABCA12_1822 PF01817 Chorismate mutase type II ABCA12_1822 PF01842 ACT domain ABCA12_1822 PF00800 Prephenate dehydratase ABCA12_1824 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_1824 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_1824 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_1825 PF00591 Glycosyl transferase family, a/b domain ABCA12_1825 PF02885 Glycosyl transferase family, helical bundle domain ABCA12_1832 PF13737 Transposase DDE domain ABCA12_1835 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ABCA12_1835 PF04717 Type VI secretion system, phage-baseplate injector ABCA12_1835 PF13296 Putative type VI secretion system Rhs element Vgr ABCA12_1836 PF07023 Protein of unknown function (DUF1315) ABCA12_1837 PF01513 ATP-NAD kinase ABCA12_1838 PF00905 Penicillin binding protein transpeptidase domain ABCA12_1838 PF14814 Bifunctional transglycosylase second domain ABCA12_1838 PF00912 Transglycosylase ABCA12_1840 PF00293 NUDIX domain ABCA12_1842 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_1842 PF08521 Two-component sensor kinase N-terminal ABCA12_1842 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_1843 PF00072 Response regulator receiver domain ABCA12_1843 PF00486 Transcriptional regulatory protein, C terminal ABCA12_1844 PF09308 LuxQ, periplasmic ABCA12_1844 PF00072 Response regulator receiver domain ABCA12_1844 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_1844 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_1846 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABCA12_1846 PF00437 Type II/IV secretion system protein ABCA12_1847 PF01527 Transposase ABCA12_1848 PF00665 Integrase core domain ABCA12_1848 PF13333 Integrase core domain ABCA12_1848 PF13276 HTH-like domain ABCA12_1850 PF01980 tRNA-methyltransferase O ABCA12_1850 PF18389 TrmO C-terminal domain ABCA12_1851 PF00970 Oxidoreductase FAD-binding domain ABCA12_1851 PF00175 Oxidoreductase NAD-binding domain ABCA12_1854 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_1855 PF04284 Protein of unknown function (DUF441) ABCA12_1856 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_1856 PF03466 LysR substrate binding domain ABCA12_1857 PF07690 Major Facilitator Superfamily ABCA12_1858 PF09997 Predicted membrane protein (DUF2238) ABCA12_1861 PF00520 Ion transport protein ABCA12_1861 PF00027 Cyclic nucleotide-binding domain ABCA12_1865 PF11791 Aconitate B N-terminal domain ABCA12_1865 PF06434 Aconitate hydratase 2 N-terminus ABCA12_1865 PF00330 Aconitase family (aconitate hydratase) ABCA12_1869 PF07244 Surface antigen variable number repeat ABCA12_1869 PF17243 POTRA domain TamA domain 1 ABCA12_1869 PF01103 Surface antigen ABCA12_1870 PF07690 Major Facilitator Superfamily ABCA12_1871 PF03232 Ubiquinone biosynthesis protein COQ7 ABCA12_1874 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_1877 PF02152 Dihydroneopterin aldolase ABCA12_1878 PF03109 ABC1 family ABCA12_1879 PF00899 ThiF family ABCA12_1880 PF13333 Integrase core domain ABCA12_1880 PF00665 Integrase core domain ABCA12_1880 PF13276 HTH-like domain ABCA12_1881 PF01527 Transposase ABCA12_1883 PF01613 Flavin reductase like domain ABCA12_1886 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABCA12_1886 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABCA12_1887 PF00106 short chain dehydrogenase ABCA12_1888 PF02311 AraC-like ligand binding domain ABCA12_1888 PF12833 Helix-turn-helix domain ABCA12_1889 PF04299 Putative FMN-binding domain ABCA12_1890 PF13847 Methyltransferase domain ABCA12_1890 PF17827 PrmC N-terminal domain ABCA12_1891 PF00472 RF-1 domain ABCA12_1891 PF03462 PCRF domain ABCA12_1892 PF05360 yiaA/B two helix domain ABCA12_1895 PF16325 Peptidase family U32 C-terminal domain ABCA12_1895 PF01136 Peptidase family U32 ABCA12_1896 PF00037 4Fe-4S binding domain ABCA12_1897 PF00464 Serine hydroxymethyltransferase ABCA12_1902 PF13333 Integrase core domain ABCA12_1902 PF13276 HTH-like domain ABCA12_1902 PF00665 Integrase core domain ABCA12_1903 PF01527 Transposase ABCA12_1904 PF01527 Transposase ABCA12_1906 PF01434 Peptidase family M41 ABCA12_1906 PF17862 AAA+ lid domain ABCA12_1906 PF00004 ATPase family associated with various cellular activities (AAA) ABCA12_1913 PF03050 Transposase IS66 family ABCA12_1913 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_1913 PF13007 Transposase C of IS166 homeodomain ABCA12_1913 PF13817 IS66 C-terminal element ABCA12_1916 PF01527 Transposase ABCA12_1924 PF01527 Transposase ABCA12_1925 PF03279 Bacterial lipid A biosynthesis acyltransferase ABCA12_1926 PF00313 'Cold-shock' DNA-binding domain ABCA12_1930 PF01553 Acyltransferase ABCA12_1931 PF01709 Transcriptional regulator ABCA12_1934 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_1934 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_1936 PF00296 Luciferase-like monooxygenase ABCA12_1937 PF03180 NLPA lipoprotein ABCA12_1938 PF09383 NIL domain ABCA12_1938 PF00005 ABC transporter ABCA12_1939 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_1940 PF06071 Protein of unknown function (DUF933) ABCA12_1940 PF01926 50S ribosome-binding GTPase ABCA12_1943 PF13545 Crp-like helix-turn-helix domain ABCA12_1943 PF00027 Cyclic nucleotide-binding domain ABCA12_1945 PF02222 ATP-grasp domain ABCA12_1946 PF01909 Nucleotidyltransferase domain ABCA12_1946 PF01966 HD domain ABCA12_1946 PF08335 GlnD PII-uridylyltransferase ABCA12_1947 PF00155 Aminotransferase class I and II ABCA12_1949 PF01037 Lrp/AsnC ligand binding domain ABCA12_1951 PF13533 Biotin-lipoyl like ABCA12_1952 PF00873 AcrB/AcrD/AcrF family ABCA12_1953 PF00255 Glutathione peroxidase ABCA12_1954 PF01641 SelR domain ABCA12_1955 PF00155 Aminotransferase class I and II ABCA12_1957 PF17763 Glutaminase/Asparaginase C-terminal domain ABCA12_1957 PF00710 Asparaginase, N-terminal ABCA12_1958 PF17763 Glutaminase/Asparaginase C-terminal domain ABCA12_1958 PF00710 Asparaginase, N-terminal ABCA12_1959 PF14579 Helix-hairpin-helix motif ABCA12_1959 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABCA12_1959 PF02811 PHP domain ABCA12_1959 PF01336 OB-fold nucleic acid binding domain ABCA12_1959 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABCA12_1960 PF00588 SpoU rRNA Methylase family ABCA12_1961 PF00132 Bacterial transferase hexapeptide (six repeats) ABCA12_1963 PF00561 alpha/beta hydrolase fold ABCA12_1963 PF08386 TAP-like protein ABCA12_1964 PF13192 Thioredoxin domain ABCA12_1964 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_1966 PF05816 Toxic anion resistance protein (TelA) ABCA12_1971 PF02673 Bacitracin resistance protein BacA ABCA12_1973 PF00156 Phosphoribosyl transferase domain ABCA12_1974 PF02674 Colicin V production protein ABCA12_1975 PF01180 Dihydroorotate dehydrogenase ABCA12_1979 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABCA12_1979 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABCA12_1980 PF00881 Nitroreductase family ABCA12_1983 PF00162 Phosphoglycerate kinase ABCA12_1985 PF02545 Maf-like protein ABCA12_1987 PF01527 Transposase ABCA12_1988 PF13333 Integrase core domain ABCA12_1988 PF00665 Integrase core domain ABCA12_1988 PF13276 HTH-like domain ABCA12_1991 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_1991 PF13359 DDE superfamily endonuclease ABCA12_1993 PF00144 Beta-lactamase ABCA12_1994 PF01575 MaoC like domain ABCA12_1996 PF02803 Thiolase, C-terminal domain ABCA12_1996 PF00108 Thiolase, N-terminal domain ABCA12_1999 PF03737 Aldolase/RraA ABCA12_2000 PF13460 NAD(P)H-binding ABCA12_2001 PF01649 Ribosomal protein S20 ABCA12_2002 PF17945 Beta/Gamma crystallin ABCA12_2002 PF12561 ToxR activated gene A lipoprotein domain ABCA12_2005 PF00459 Inositol monophosphatase family ABCA12_2006 PF13419 Haloacid dehalogenase-like hydrolase ABCA12_2007 PF01479 S4 domain ABCA12_2008 PF00154 recA bacterial DNA recombination protein ABCA12_2009 PF02631 RecX family ABCA12_2011 PF13145 PPIC-type PPIASE domain ABCA12_2012 PF00216 Bacterial DNA-binding protein ABCA12_2015 PF02082 Transcriptional regulator ABCA12_2016 PF00266 Aminotransferase class-V ABCA12_2017 PF01592 NifU-like N terminal domain ABCA12_2018 PF01521 Iron-sulphur cluster biosynthesis ABCA12_2019 PF07743 HSCB C-terminal oligomerisation domain ABCA12_2019 PF00226 DnaJ domain ABCA12_2020 PF00012 Hsp70 protein ABCA12_2021 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCA12_2022 PF00211 Adenylate and Guanylate cyclase catalytic domain ABCA12_2024 PF02559 CarD-like/TRCF domain ABCA12_2024 PF00270 DEAD/DEAH box helicase ABCA12_2024 PF00271 Helicase conserved C-terminal domain ABCA12_2024 PF03461 TRCF domain ABCA12_2024 PF17757 UvrB interaction domain ABCA12_2026 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_2026 PF03466 LysR substrate binding domain ABCA12_2027 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABCA12_2028 PF01810 LysE type translocator ABCA12_2029 PF03594 Benzoate membrane transport protein ABCA12_2030 PF00999 Sodium/hydrogen exchanger family ABCA12_2030 PF02254 TrkA-N domain ABCA12_2031 PF06271 RDD family ABCA12_2033 PF03315 Serine dehydratase beta chain ABCA12_2033 PF03313 Serine dehydratase alpha chain ABCA12_2034 PF01433 Peptidase family M1 domain ABCA12_2034 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ABCA12_2034 PF11940 Domain of unknown function (DUF3458) Ig-like fold ABCA12_2039 PF02110 Hydroxyethylthiazole kinase family ABCA12_2044 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) ABCA12_2044 PF13296 Putative type VI secretion system Rhs element Vgr ABCA12_2044 PF04717 Type VI secretion system, phage-baseplate injector ABCA12_2045 PF04717 Type VI secretion system, phage-baseplate injector ABCA12_2045 PF01471 Putative peptidoglycan binding domain ABCA12_2047 PF05970 PIF1-like helicase ABCA12_2047 PF14493 Helix-turn-helix domain ABCA12_2051 PF00958 GMP synthase C terminal domain ABCA12_2051 PF00117 Glutamine amidotransferase class-I ABCA12_2051 PF02540 NAD synthase ABCA12_2053 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABCA12_2053 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ABCA12_2054 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABCA12_2060 PF17209 Hfq protein ABCA12_2062 PF01119 DNA mismatch repair protein, C-terminal domain ABCA12_2062 PF08676 MutL C terminal dimerisation domain ABCA12_2063 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABCA12_2065 PF00849 RNA pseudouridylate synthase ABCA12_2067 PF00583 Acetyltransferase (GNAT) family ABCA12_2068 PF00849 RNA pseudouridylate synthase ABCA12_2068 PF01479 S4 domain ABCA12_2071 PF00296 Luciferase-like monooxygenase ABCA12_2073 PF03618 Kinase/pyrophosphorylase ABCA12_2074 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ABCA12_2074 PF00391 PEP-utilising enzyme, mobile domain ABCA12_2074 PF02896 PEP-utilising enzyme, TIM barrel domain ABCA12_2076 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABCA12_2076 PF06481 COX Aromatic Rich Motif ABCA12_2077 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABCA12_2078 PF00510 Cytochrome c oxidase subunit III ABCA12_2079 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABCA12_2080 PF01040 UbiA prenyltransferase family ABCA12_2083 PF01250 Ribosomal protein S6 ABCA12_2084 PF01084 Ribosomal protein S18 ABCA12_2085 PF01281 Ribosomal protein L9, N-terminal domain ABCA12_2085 PF03948 Ribosomal protein L9, C-terminal domain ABCA12_2086 PF03796 DnaB-like helicase C terminal domain ABCA12_2086 PF00772 DnaB-like helicase N terminal domain ABCA12_2087 PF01168 Alanine racemase, N-terminal domain ABCA12_2087 PF00842 Alanine racemase, C-terminal domain ABCA12_2089 PF08379 Bacterial transglutaminase-like N-terminal region ABCA12_2089 PF01841 Transglutaminase-like superfamily ABCA12_2091 PF14403 Circularly permuted ATP-grasp type 2 ABCA12_2093 PF00709 Adenylosuccinate synthetase ABCA12_2094 PF13393 Histidyl-tRNA synthetase ABCA12_2096 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABCA12_2096 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABCA12_2097 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABCA12_2097 PF01411 tRNA synthetases class II (A) ABCA12_2097 PF02272 DHHA1 domain ABCA12_2098 PF00696 Amino acid kinase family ABCA12_2098 PF13840 ACT domain ABCA12_2098 PF01842 ACT domain ABCA12_2099 PF02599 Global regulator protein family ABCA12_2100 PF01351 Ribonuclease HII ABCA12_2103 PF01292 Prokaryotic cytochrome b561 ABCA12_2104 PF00962 Adenosine/AMP deaminase ABCA12_2105 PF00860 Permease family ABCA12_2107 PF00593 TonB dependent receptor ABCA12_2107 PF07715 TonB-dependent Receptor Plug Domain ABCA12_2112 PF00893 Small Multidrug Resistance protein ABCA12_2113 PF01134 Glucose inhibited division protein A ABCA12_2113 PF13932 GidA associated domain ABCA12_2117 PF02954 Bacterial regulatory protein, Fis family ABCA12_2118 PF02142 MGS-like domain ABCA12_2118 PF01808 AICARFT/IMPCHase bienzyme ABCA12_2119 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABCA12_2119 PF02843 Phosphoribosylglycinamide synthetase, C domain ABCA12_2119 PF02844 Phosphoribosylglycinamide synthetase, N domain ABCA12_2120 PF03180 NLPA lipoprotein ABCA12_2121 PF09383 NIL domain ABCA12_2121 PF00005 ABC transporter ABCA12_2122 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_2125 PF00753 Metallo-beta-lactamase superfamily ABCA12_2125 PF16123 Hydroxyacylglutathione hydrolase C-terminus ABCA12_2127 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ABCA12_2127 PF05221 S-adenosyl-L-homocysteine hydrolase ABCA12_2128 PF02219 Methylenetetrahydrofolate reductase ABCA12_2129 PF04452 RNA methyltransferase ABCA12_2130 PF00990 Diguanylate cyclase, GGDEF domain ABCA12_2130 PF00563 EAL domain ABCA12_2130 PF03707 Bacterial signalling protein N terminal repeat ABCA12_2131 PF00390 Malic enzyme, N-terminal domain ABCA12_2131 PF01515 Phosphate acetyl/butaryl transferase ABCA12_2131 PF03949 Malic enzyme, NAD binding domain ABCA12_2132 PF01743 Poly A polymerase head domain ABCA12_2132 PF12627 Probable RNA and SrmB- binding site of polymerase A ABCA12_2133 PF00889 Elongation factor TS ABCA12_2134 PF00318 Ribosomal protein S2 ABCA12_2135 PF00557 Metallopeptidase family M24 ABCA12_2137 PF07690 Major Facilitator Superfamily ABCA12_2139 PF13180 PDZ domain ABCA12_2139 PF17820 PDZ domain ABCA12_2140 PF01784 NIF3 (NGG1p interacting factor 3) ABCA12_2141 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABCA12_2141 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABCA12_2145 PF01040 UbiA prenyltransferase family ABCA12_2146 PF01040 UbiA prenyltransferase family ABCA12_2147 PF04345 Chorismate lyase ABCA12_2148 PF00120 Glutamine synthetase, catalytic domain ABCA12_2148 PF03951 Glutamine synthetase, beta-Grasp domain ABCA12_2149 PF00117 Glutamine amidotransferase class-I ABCA12_2150 PF00375 Sodium:dicarboxylate symporter family ABCA12_2151 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCA12_2151 PF03476 MOSC N-terminal beta barrel domain ABCA12_2151 PF03473 MOSC domain ABCA12_2152 PF00591 Glycosyl transferase family, a/b domain ABCA12_2152 PF02885 Glycosyl transferase family, helical bundle domain ABCA12_2153 PF00218 Indole-3-glycerol phosphate synthase ABCA12_2154 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_2157 PF01227 GTP cyclohydrolase I ABCA12_2161 PF13737 Transposase DDE domain ABCA12_2163 PF05675 Protein of unknown function (DUF817) ABCA12_2164 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABCA12_2168 PF01979 Amidohydrolase family ABCA12_2169 PF00929 Exonuclease ABCA12_2171 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABCA12_2171 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_2172 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABCA12_2172 PF00005 ABC transporter ABCA12_2173 PF12911 N-terminal TM domain of oligopeptide transport permease C ABCA12_2173 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_2174 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_2175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABCA12_2176 PF01476 LysM domain ABCA12_2176 PF01464 Transglycosylase SLT domain ABCA12_2177 PF00929 Exonuclease ABCA12_2179 PF09297 NADH pyrophosphatase zinc ribbon domain ABCA12_2179 PF00293 NUDIX domain ABCA12_2181 PF04972 BON domain ABCA12_2182 PF02021 Uncharacterised protein family UPF0102 ABCA12_2184 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABCA12_2187 PF13411 MerR HTH family regulatory protein ABCA12_2189 PF01494 FAD binding domain ABCA12_2190 PF01494 FAD binding domain ABCA12_2191 PF00557 Metallopeptidase family M24 ABCA12_2191 PF05195 Aminopeptidase P, N-terminal domain ABCA12_2197 PF05762 VWA domain containing CoxE-like protein ABCA12_2201 PF07728 AAA domain (dynein-related subfamily) ABCA12_2205 PF04355 SmpA / OmlA family ABCA12_2205 PF00691 OmpA family ABCA12_2206 PF01527 Transposase ABCA12_2207 PF13276 HTH-like domain ABCA12_2207 PF13333 Integrase core domain ABCA12_2207 PF00665 Integrase core domain ABCA12_2208 PF01527 Transposase ABCA12_2211 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABCA12_2212 PF00004 ATPase family associated with various cellular activities (AAA) ABCA12_2212 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABCA12_2212 PF05362 Lon protease (S16) C-terminal proteolytic domain ABCA12_2213 PF02590 Predicted SPOUT methyltransferase ABCA12_2214 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ABCA12_2216 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABCA12_2216 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABCA12_2217 PF04060 Putative Fe-S cluster ABCA12_2218 PF10576 Iron-sulfur binding domain of endonuclease III ABCA12_2218 PF00633 Helix-hairpin-helix motif ABCA12_2218 PF00730 HhH-GPD superfamily base excision DNA repair protein ABCA12_2220 PF05191 Adenylate kinase, active site lid ABCA12_2223 PF00905 Penicillin binding protein transpeptidase domain ABCA12_2223 PF03717 Penicillin-binding Protein dimerisation domain ABCA12_2231 PF08496 Peptidase family S49 N-terminal ABCA12_2231 PF01343 Peptidase family S49 ABCA12_2233 PF00005 ABC transporter ABCA12_2234 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_2235 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_2238 PF00282 Pyridoxal-dependent decarboxylase conserved domain ABCA12_2239 PF00202 Aminotransferase class-III ABCA12_2241 PF00440 Bacterial regulatory proteins, tetR family ABCA12_2243 PF00487 Fatty acid desaturase ABCA12_2244 PF00970 Oxidoreductase FAD-binding domain ABCA12_2244 PF00175 Oxidoreductase NAD-binding domain ABCA12_2244 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCA12_2245 PF00440 Bacterial regulatory proteins, tetR family ABCA12_2247 PF13737 Transposase DDE domain ABCA12_2248 PF00210 Ferritin-like domain ABCA12_2250 PF00176 SNF2 family N-terminal domain ABCA12_2250 PF12137 RNA polymerase recycling family C-terminal ABCA12_2250 PF18337 RapA N-terminal Tudor like domain ABCA12_2250 PF18339 RapA N-terminal Tudor like domain 1 ABCA12_2250 PF00271 Helicase conserved C-terminal domain ABCA12_2251 PF00849 RNA pseudouridylate synthase ABCA12_2252 PF00202 Aminotransferase class-III ABCA12_2253 PF02581 Thiamine monophosphate synthase ABCA12_2256 PF09615 CRISPR-associated protein (Cas_Csy3) ABCA12_2257 PF09614 CRISPR-associated protein (Cas_Csy2) ABCA12_2258 PF09611 CRISPR-associated protein (Cas_Csy1) ABCA12_2261 PF01867 CRISPR associated protein Cas1 ABCA12_2267 PF01699 Sodium/calcium exchanger protein ABCA12_2268 PF05193 Peptidase M16 inactive domain ABCA12_2268 PF00675 Insulinase (Peptidase family M16) ABCA12_2269 PF02567 Phenazine biosynthesis-like protein ABCA12_2270 PF00180 Isocitrate/isopropylmalate dehydrogenase ABCA12_2271 PF00849 RNA pseudouridylate synthase ABCA12_2273 PF03971 Monomeric isocitrate dehydrogenase ABCA12_2275 PF07943 Penicillin-binding protein 5, C-terminal domain ABCA12_2275 PF00768 D-alanyl-D-alanine carboxypeptidase ABCA12_2276 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_2277 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCA12_2278 PF00875 DNA photolyase ABCA12_2278 PF03441 FAD binding domain of DNA photolyase ABCA12_2282 PF01654 Cytochrome bd terminal oxidase subunit I ABCA12_2284 PF02322 Cytochrome bd terminal oxidase subunit II ABCA12_2286 PF03060 Nitronate monooxygenase ABCA12_2287 PF02503 Polyphosphate kinase middle domain ABCA12_2287 PF13090 Polyphosphate kinase C-terminal domain 2 ABCA12_2287 PF17941 Polyphosphate kinase C-terminal domain 1 ABCA12_2287 PF13089 Polyphosphate kinase N-terminal domain ABCA12_2288 PF00912 Transglycosylase ABCA12_2289 PF01694 Rhomboid family ABCA12_2292 PF00005 ABC transporter ABCA12_2293 PF13472 GDSL-like Lipase/Acylhydrolase family ABCA12_2294 PF00484 Carbonic anhydrase ABCA12_2295 PF00561 alpha/beta hydrolase fold ABCA12_2297 PF00593 TonB dependent receptor ABCA12_2297 PF07715 TonB-dependent Receptor Plug Domain ABCA12_2298 PF07715 TonB-dependent Receptor Plug Domain ABCA12_2298 PF00593 TonB dependent receptor ABCA12_2299 PF01106 NifU-like domain ABCA12_2299 PF01521 Iron-sulphur cluster biosynthesis ABCA12_2301 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_2304 PF00152 tRNA synthetases class II (D, K and N) ABCA12_2305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABCA12_2305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABCA12_2305 PF11890 Domain of unknown function (DUF3410) ABCA12_2306 PF01219 Prokaryotic diacylglycerol kinase ABCA12_2308 PF00118 TCP-1/cpn60 chaperonin family ABCA12_2309 PF00166 Chaperonin 10 Kd subunit ABCA12_2311 PF00781 Diacylglycerol kinase catalytic domain ABCA12_2312 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ABCA12_2312 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ABCA12_2313 PF01266 FAD dependent oxidoreductase ABCA12_2313 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABCA12_2314 PF08220 DeoR-like helix-turn-helix domain ABCA12_2314 PF00455 DeoR C terminal sensor domain ABCA12_2315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABCA12_2315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABCA12_2317 PF14542 GCN5-related N-acetyl-transferase ABCA12_2319 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABCA12_2319 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABCA12_2320 PF09423 PhoD-like phosphatase ABCA12_2320 PF16655 PhoD-like phosphatase, N-terminal domain ABCA12_2322 PF00535 Glycosyl transferase family 2 ABCA12_2323 PF01522 Polysaccharide deacetylase ABCA12_2323 PF14883 Hypothetical glycosyl hydrolase family 13 ABCA12_2325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCA12_2326 PF07152 YaeQ protein ABCA12_2327 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABCA12_2327 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABCA12_2329 PF03061 Thioesterase superfamily ABCA12_2331 PF13359 DDE superfamily endonuclease ABCA12_2331 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_2334 PF10415 Fumarase C C-terminus ABCA12_2334 PF00206 Lyase ABCA12_2335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_2335 PF03466 LysR substrate binding domain ABCA12_2336 PF13737 Transposase DDE domain ABCA12_2338 PF00589 Phage integrase family ABCA12_2338 PF13356 Arm DNA-binding domain ABCA12_2341 PF09828 Chromate resistance exported protein ABCA12_2342 PF02417 Chromate transporter ABCA12_2343 PF07690 Major Facilitator Superfamily ABCA12_2349 PF00529 HlyD membrane-fusion protein of T1SS ABCA12_2349 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCA12_2360 PF05930 Prophage CP4-57 regulatory protein (AlpA) ABCA12_2364 PF00873 AcrB/AcrD/AcrF family ABCA12_2365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCA12_2369 PF07732 Multicopper oxidase ABCA12_2369 PF00394 Multicopper oxidase ABCA12_2369 PF07731 Multicopper oxidase ABCA12_2371 PF00486 Transcriptional regulatory protein, C terminal ABCA12_2371 PF00072 Response regulator receiver domain ABCA12_2372 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2372 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_2372 PF00672 HAMP domain ABCA12_2377 PF02661 Fic/DOC family ABCA12_2378 PF13411 MerR HTH family regulatory protein ABCA12_2379 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_2379 PF00403 Heavy-metal-associated domain ABCA12_2379 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABCA12_2380 PF03203 MerC mercury resistance protein ABCA12_2381 PF00376 MerR family regulatory protein ABCA12_2381 PF09278 MerR, DNA binding ABCA12_2382 PF01252 Signal peptidase (SPase) II ABCA12_2384 PF13411 MerR HTH family regulatory protein ABCA12_2393 PF01272 Transcription elongation factor, GreA/GreB, C-term ABCA12_2393 PF03449 Transcription elongation factor, N-terminal ABCA12_2394 PF01464 Transglycosylase SLT domain ABCA12_2394 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABCA12_2396 PF01171 PP-loop family ABCA12_2397 PF01464 Transglycosylase SLT domain ABCA12_2398 PF01435 Peptidase family M48 ABCA12_2400 PF00571 CBS domain ABCA12_2400 PF01769 Divalent cation transporter ABCA12_2400 PF03448 MgtE intracellular N domain ABCA12_2401 PF00873 AcrB/AcrD/AcrF family ABCA12_2402 PF00884 Sulfatase ABCA12_2403 PF03009 Glycerophosphoryl diester phosphodiesterase family ABCA12_2404 PF04973 Nicotinamide mononucleotide transporter ABCA12_2408 PF12450 von Willebrand factor ABCA12_2408 PF12034 Domain of unknown function (DUF3520) ABCA12_2408 PF00092 von Willebrand factor type A domain ABCA12_2409 PF00809 Pterin binding enzyme ABCA12_2410 PF06480 FtsH Extracellular ABCA12_2410 PF00004 ATPase family associated with various cellular activities (AAA) ABCA12_2410 PF01434 Peptidase family M41 ABCA12_2410 PF17862 AAA+ lid domain ABCA12_2411 PF01728 FtsJ-like methyltransferase ABCA12_2412 PF01985 CRS1 / YhbY (CRM) domain ABCA12_2415 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABCA12_2415 PF00117 Glutamine amidotransferase class-I ABCA12_2416 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABCA12_2416 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCA12_2416 PF02142 MGS-like domain ABCA12_2417 PF03449 Transcription elongation factor, N-terminal ABCA12_2417 PF01272 Transcription elongation factor, GreA/GreB, C-term ABCA12_2420 PF00582 Universal stress protein family ABCA12_2422 PF13737 Transposase DDE domain ABCA12_2424 PF00999 Sodium/hydrogen exchanger family ABCA12_2425 PF13007 Transposase C of IS166 homeodomain ABCA12_2425 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_2425 PF03050 Transposase IS66 family ABCA12_2425 PF13817 IS66 C-terminal element ABCA12_2428 PF00999 Sodium/hydrogen exchanger family ABCA12_2429 PF04228 Putative neutral zinc metallopeptidase ABCA12_2430 PF05661 Protein of unknown function (DUF808) ABCA12_2431 PF00579 tRNA synthetases class I (W and Y) ABCA12_2432 PF07290 Protein of unknown function (DUF1449) ABCA12_2433 PF15975 Flotillin ABCA12_2433 PF01145 SPFH domain / Band 7 family ABCA12_2434 PF13361 UvrD-like helicase C-terminal domain ABCA12_2434 PF00580 UvrD/REP helicase N-terminal domain ABCA12_2436 PF01425 Amidase ABCA12_2438 PF01145 SPFH domain / Band 7 family ABCA12_2438 PF15975 Flotillin ABCA12_2440 PF00549 CoA-ligase ABCA12_2440 PF02629 CoA binding domain ABCA12_2441 PF08442 ATP-grasp domain ABCA12_2441 PF00549 CoA-ligase ABCA12_2442 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABCA12_2442 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_2443 PF00364 Biotin-requiring enzyme ABCA12_2443 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABCA12_2443 PF02817 e3 binding domain ABCA12_2444 PF02779 Transketolase, pyrimidine binding domain ABCA12_2444 PF00676 Dehydrogenase E1 component ABCA12_2444 PF16870 2-oxoglutarate dehydrogenase C-terminal ABCA12_2444 PF16078 2-oxoglutarate dehydrogenase N-terminus ABCA12_2445 PF13085 2Fe-2S iron-sulfur cluster binding domain ABCA12_2446 PF00890 FAD binding domain ABCA12_2446 PF02910 Fumarate reductase flavoprotein C-term ABCA12_2447 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABCA12_2448 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABCA12_2450 PF00285 Citrate synthase, C-terminal domain ABCA12_2454 PF17773 UPF0176 acylphosphatase like domain ABCA12_2454 PF00581 Rhodanese-like domain ABCA12_2455 PF09335 SNARE associated Golgi protein ABCA12_2457 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_2457 PF13359 DDE superfamily endonuclease ABCA12_2463 PF03979 Sigma-70 factor, region 1.1 ABCA12_2463 PF04545 Sigma-70, region 4 ABCA12_2463 PF04546 Sigma-70, non-essential region ABCA12_2463 PF00140 Sigma-70 factor, region 1.2 ABCA12_2463 PF04539 Sigma-70 region 3 ABCA12_2463 PF04542 Sigma-70 region 2 ABCA12_2464 PF04359 Protein of unknown function (DUF493) ABCA12_2466 PF03099 Biotin/lipoate A/B protein ligase family ABCA12_2468 PF00465 Iron-containing alcohol dehydrogenase ABCA12_2469 PF13520 Amino acid permease ABCA12_2471 PF03358 NADPH-dependent FMN reductase ABCA12_2472 PF01638 HxlR-like helix-turn-helix ABCA12_2473 PF00588 SpoU rRNA Methylase family ABCA12_2474 PF10414 Sirohaem synthase dimerisation region ABCA12_2474 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABCA12_2474 PF14824 Sirohaem biosynthesis protein central ABCA12_2475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABCA12_2475 PF02403 Seryl-tRNA synthetase N-terminal domain ABCA12_2477 PF03548 Outer membrane lipoprotein carrier protein LolA ABCA12_2478 PF02678 Pirin ABCA12_2478 PF05726 Pirin C-terminal cupin domain ABCA12_2479 PF01016 Ribosomal L27 protein ABCA12_2480 PF00829 Ribosomal prokaryotic L21 protein ABCA12_2481 PF00348 Polyprenyl synthetase ABCA12_2483 PF01569 PAP2 superfamily ABCA12_2484 PF00529 HlyD membrane-fusion protein of T1SS ABCA12_2484 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ABCA12_2487 PF02321 Outer membrane efflux protein ABCA12_2488 PF01906 Putative heavy-metal-binding ABCA12_2489 PF01906 Putative heavy-metal-binding ABCA12_2493 PF00133 tRNA synthetases class I (I, L, M and V) ABCA12_2493 PF08264 Anticodon-binding domain of tRNA ABCA12_2493 PF10458 Valyl tRNA synthetase tRNA binding arm ABCA12_2495 PF00909 Ammonium Transporter Family ABCA12_2498 PF08521 Two-component sensor kinase N-terminal ABCA12_2498 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2498 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_2499 PF00072 Response regulator receiver domain ABCA12_2499 PF00486 Transcriptional regulatory protein, C terminal ABCA12_2500 PF00884 Sulfatase ABCA12_2500 PF08019 Phosphoethanolamine transferase EptA/EptB ABCA12_2505 PF01734 Patatin-like phospholipase ABCA12_2507 PF01145 SPFH domain / Band 7 family ABCA12_2508 PF12823 Domain of unknown function (DUF3817) ABCA12_2509 PF00348 Polyprenyl synthetase ABCA12_2510 PF04303 PrpF protein ABCA12_2511 PF00324 Amino acid permease ABCA12_2512 PF02463 RecF/RecN/SMC N terminal domain ABCA12_2513 PF00580 UvrD/REP helicase N-terminal domain ABCA12_2513 PF13361 UvrD-like helicase C-terminal domain ABCA12_2515 PF00120 Glutamine synthetase, catalytic domain ABCA12_2516 PF01569 PAP2 superfamily ABCA12_2518 PF03600 Citrate transporter ABCA12_2520 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_2520 PF13359 DDE superfamily endonuclease ABCA12_2522 PF00171 Aldehyde dehydrogenase family ABCA12_2524 PF00486 Transcriptional regulatory protein, C terminal ABCA12_2524 PF00072 Response regulator receiver domain ABCA12_2525 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_2525 PF02702 Osmosensitive K+ channel His kinase sensor domain ABCA12_2525 PF13493 Domain of unknown function (DUF4118) ABCA12_2525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2526 PF13493 Domain of unknown function (DUF4118) ABCA12_2526 PF13492 GAF domain ABCA12_2526 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2526 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_2526 PF02702 Osmosensitive K+ channel His kinase sensor domain ABCA12_2528 PF02669 K+-transporting ATPase, c chain ABCA12_2530 PF03814 Potassium-transporting ATPase A subunit ABCA12_2535 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain ABCA12_2535 PF06974 Protein of unknown function (DUF1298) ABCA12_2537 PF10150 Ribonuclease E/G family ABCA12_2537 PF00575 S1 RNA binding domain ABCA12_2538 PF02545 Maf-like protein ABCA12_2540 PF04085 rod shape-determining protein MreC ABCA12_2542 PF02686 Glu-tRNAGln amidotransferase C subunit ABCA12_2543 PF01425 Amidase ABCA12_2544 PF02934 GatB/GatE catalytic domain ABCA12_2544 PF02637 GatB domain ABCA12_2546 PF01725 Ham1 family ABCA12_2547 PF13359 DDE superfamily endonuclease ABCA12_2547 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_2549 PF00962 Adenosine/AMP deaminase ABCA12_2554 PF03466 LysR substrate binding domain ABCA12_2554 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_2557 PF05992 SbmA/BacA-like family ABCA12_2558 PF01734 Patatin-like phospholipase ABCA12_2559 PF01235 Sodium:alanine symporter family ABCA12_2563 PF00881 Nitroreductase family ABCA12_2564 PF07690 Major Facilitator Superfamily ABCA12_2565 PF12805 FUSC-like inner membrane protein yccS ABCA12_2571 PF17969 L,D-transpeptidase C-terminal domain ABCA12_2571 PF03734 L,D-transpeptidase catalytic domain ABCA12_2572 PF04304 Protein of unknown function (DUF454) ABCA12_2574 PF08085 Entericidin EcnA/B family ABCA12_2575 PF07687 Peptidase dimerisation domain ABCA12_2575 PF01546 Peptidase family M20/M25/M40 ABCA12_2577 PF02895 Signal transducing histidine kinase, homodimeric domain ABCA12_2577 PF01627 Hpt domain ABCA12_2577 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2577 PF02895 Signal transducing histidine kinase, homodimeric domain ABCA12_2577 PF01584 CheW-like domain ABCA12_2577 PF01584 CheW-like domain ABCA12_2577 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2577 PF07194 P2 response regulator binding domain ABCA12_2577 PF01627 Hpt domain ABCA12_2577 PF07194 P2 response regulator binding domain ABCA12_2578 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ABCA12_2578 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABCA12_2579 PF01584 CheW-like domain ABCA12_2580 PF00072 Response regulator receiver domain ABCA12_2581 PF00072 Response regulator receiver domain ABCA12_2583 PF04073 Aminoacyl-tRNA editing domain ABCA12_2583 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABCA12_2583 PF03129 Anticodon binding domain ABCA12_2584 PF07411 Domain of unknown function (DUF1508) ABCA12_2585 PF03831 PhnA domain ABCA12_2585 PF08274 PhnA Zinc-Ribbon ABCA12_2586 PF04343 Protein of unknown function, DUF488 ABCA12_2588 PF01571 Aminomethyltransferase folate-binding domain ABCA12_2590 PF07715 TonB-dependent Receptor Plug Domain ABCA12_2590 PF00593 TonB dependent receptor ABCA12_2591 PF06827 Zinc finger found in FPG and IleRS ABCA12_2591 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABCA12_2591 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABCA12_2592 PF00639 PPIC-type PPIASE domain ABCA12_2592 PF09312 SurA N-terminal domain ABCA12_2594 PF01741 Large-conductance mechanosensitive channel, MscL ABCA12_2595 PF00679 Elongation factor G C-terminus ABCA12_2595 PF00009 Elongation factor Tu GTP binding domain ABCA12_2595 PF03144 Elongation factor Tu domain 2 ABCA12_2596 PF00860 Permease family ABCA12_2597 PF08468 Methyltransferase small domain N-terminal ABCA12_2597 PF05175 Methyltransferase small domain ABCA12_2598 PF00324 Amino acid permease ABCA12_2599 PF01139 tRNA-splicing ligase RtcB ABCA12_2601 PF00691 OmpA family ABCA12_2601 PF13505 Outer membrane protein beta-barrel domain ABCA12_2603 PF02803 Thiolase, C-terminal domain ABCA12_2603 PF00108 Thiolase, N-terminal domain ABCA12_2605 PF00893 Small Multidrug Resistance protein ABCA12_2607 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABCA12_2607 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABCA12_2608 PF01011 PQQ enzyme repeat ABCA12_2609 PF04966 Carbohydrate-selective porin, OprB family ABCA12_2610 PF02515 CoA-transferase family III ABCA12_2611 PF12833 Helix-turn-helix domain ABCA12_2611 PF02311 AraC-like ligand binding domain ABCA12_2614 PF00108 Thiolase, N-terminal domain ABCA12_2614 PF02803 Thiolase, C-terminal domain ABCA12_2615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABCA12_2615 PF00378 Enoyl-CoA hydratase/isomerase ABCA12_2615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABCA12_2621 PF03006 Haemolysin-III related ABCA12_2622 PF00083 Sugar (and other) transporter ABCA12_2622 PF07690 Major Facilitator Superfamily ABCA12_2625 PF02810 SEC-C motif ABCA12_2625 PF07517 SecA DEAD-like domain ABCA12_2625 PF01043 SecA preprotein cross-linking domain ABCA12_2625 PF07516 SecA Wing and Scaffold domain ABCA12_2626 PF00578 AhpC/TSA family ABCA12_2626 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABCA12_2627 PF00753 Metallo-beta-lactamase superfamily ABCA12_2631 PF08245 Mur ligase middle domain ABCA12_2631 PF02875 Mur ligase family, glutamate ligase domain ABCA12_2632 PF01039 Carboxyl transferase domain ABCA12_2633 PF00290 Tryptophan synthase alpha chain ABCA12_2638 PF00149 Calcineurin-like phosphoesterase ABCA12_2640 PF00291 Pyridoxal-phosphate dependent enzyme ABCA12_2641 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABCA12_2642 PF00593 TonB dependent receptor ABCA12_2642 PF07715 TonB-dependent Receptor Plug Domain ABCA12_2643 PF01923 Cobalamin adenosyltransferase ABCA12_2647 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABCA12_2650 PF00072 Response regulator receiver domain ABCA12_2650 PF00486 Transcriptional regulatory protein, C terminal ABCA12_2651 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_2651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2651 PF00672 HAMP domain ABCA12_2653 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_2653 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABCA12_2653 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_2653 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_2654 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_2654 PF12806 Acetyl-CoA dehydrogenase C-terminal like ABCA12_2654 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_2654 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_2660 PF06146 Phosphate-starvation-inducible E ABCA12_2666 PF00593 TonB dependent receptor ABCA12_2666 PF07715 TonB-dependent Receptor Plug Domain ABCA12_2668 PF01336 OB-fold nucleic acid binding domain ABCA12_2668 PF00152 tRNA synthetases class II (D, K and N) ABCA12_2668 PF02938 GAD domain ABCA12_2673 PF01050 Mannose-6-phosphate isomerase ABCA12_2673 PF00483 Nucleotidyl transferase ABCA12_2676 PF17102 Stealth protein CR3, conserved region 3 ABCA12_2676 PF17103 Stealth protein CR4, conserved region 4 ABCA12_2676 PF17101 Stealth protein CR1, conserved region 1 ABCA12_2676 PF11380 Stealth protein CR2, conserved region 2 ABCA12_2678 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABCA12_2678 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABCA12_2679 PF01063 Amino-transferase class IV ABCA12_2680 PF03710 Glutamate-ammonia ligase adenylyltransferase ABCA12_2680 PF08335 GlnD PII-uridylyltransferase ABCA12_2681 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_2681 PF09456 RcsC Alpha-Beta-Loop (ABL) ABCA12_2681 PF00072 Response regulator receiver domain ABCA12_2681 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2682 PF02547 Queuosine biosynthesis protein ABCA12_2685 PF01702 Queuine tRNA-ribosyltransferase ABCA12_2686 PF02699 Preprotein translocase subunit ABCA12_2687 PF02355 Protein export membrane protein ABCA12_2687 PF13721 SecD export protein N-terminal TM region ABCA12_2687 PF07549 SecD/SecF GG Motif ABCA12_2688 PF02355 Protein export membrane protein ABCA12_2688 PF07549 SecD/SecF GG Motif ABCA12_2690 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABCA12_2690 PF01926 50S ribosome-binding GTPase ABCA12_2691 PF13360 PQQ-like domain ABCA12_2693 PF03129 Anticodon binding domain ABCA12_2693 PF13393 Histidyl-tRNA synthetase ABCA12_2694 PF04551 GcpE protein ABCA12_2697 PF04055 Radical SAM superfamily ABCA12_2698 PF00334 Nucleoside diphosphate kinase ABCA12_2699 PF04384 Iron-sulphur cluster assembly ABCA12_2700 PF01569 PAP2 superfamily ABCA12_2701 PF00534 Glycosyl transferases group 1 ABCA12_2701 PF13439 Glycosyltransferase Family 4 ABCA12_2702 PF00149 Calcineurin-like phosphoesterase ABCA12_2703 PF00398 Ribosomal RNA adenine dimethylase ABCA12_2704 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABCA12_2706 PF00572 Ribosomal protein L13 ABCA12_2707 PF00380 Ribosomal protein S9/S16 ABCA12_2708 PF02798 Glutathione S-transferase, N-terminal domain ABCA12_2708 PF00043 Glutathione S-transferase, C-terminal domain ABCA12_2709 PF04386 Stringent starvation protein B ABCA12_2713 PF13359 DDE superfamily endonuclease ABCA12_2713 PF13613 Helix-turn-helix of DDE superfamily endonuclease ABCA12_2717 PF03372 Endonuclease/Exonuclease/phosphatase family ABCA12_2718 PF13340 Putative transposase of IS4/5 family (DUF4096) ABCA12_2723 PF02785 Biotin carboxylase C-terminal domain ABCA12_2723 PF00289 Biotin carboxylase, N-terminal domain ABCA12_2723 PF00364 Biotin-requiring enzyme ABCA12_2723 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABCA12_2725 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_2725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_2725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_2726 PF01039 Carboxyl transferase domain ABCA12_2729 PF17932 Tetracyclin repressor-like, C-terminal domain ABCA12_2729 PF00440 Bacterial regulatory proteins, tetR family ABCA12_2730 PF13302 Acetyltransferase (GNAT) domain ABCA12_2731 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_2731 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_2731 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_2732 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_2732 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_2732 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_2733 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_2733 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_2733 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_2738 PF01066 CDP-alcohol phosphatidyltransferase ABCA12_2739 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ABCA12_2743 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABCA12_2743 PF00056 lactate/malate dehydrogenase, NAD binding domain ABCA12_2745 PF10145 Phage-related minor tail protein ABCA12_2745 PF01551 Peptidase family M23 ABCA12_2745 PF01464 Transglycosylase SLT domain ABCA12_2746 PF04055 Radical SAM superfamily ABCA12_2746 PF01938 TRAM domain ABCA12_2746 PF00919 Uncharacterized protein family UPF0004 ABCA12_2747 PF02562 PhoH-like protein ABCA12_2748 PF02130 Uncharacterized protein family UPF0054 ABCA12_2751 PF07715 TonB-dependent Receptor Plug Domain ABCA12_2751 PF00593 TonB dependent receptor ABCA12_2756 PF00303 Thymidylate synthase ABCA12_2757 PF00186 Dihydrofolate reductase ABCA12_2760 PF01625 Peptide methionine sulfoxide reductase ABCA12_2762 PF01618 MotA/TolQ/ExbB proton channel family ABCA12_2764 PF01842 ACT domain ABCA12_2764 PF00551 Formyl transferase ABCA12_2765 PF00440 Bacterial regulatory proteins, tetR family ABCA12_2765 PF08360 QacR-like protein, C-terminal region ABCA12_2766 PF00171 Aldehyde dehydrogenase family ABCA12_2767 PF00830 Ribosomal L28 family ABCA12_2768 PF00471 Ribosomal protein L33 ABCA12_2769 PF02254 TrkA-N domain ABCA12_2769 PF00999 Sodium/hydrogen exchanger family ABCA12_2773 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ABCA12_2774 PF00580 UvrD/REP helicase N-terminal domain ABCA12_2774 PF13361 UvrD-like helicase C-terminal domain ABCA12_2778 PF01396 Topoisomerase DNA binding C4 zinc finger ABCA12_2778 PF01131 DNA topoisomerase ABCA12_2778 PF08272 Topoisomerase I zinc-ribbon-like ABCA12_2778 PF01751 Toprim domain ABCA12_2781 PF04102 SlyX ABCA12_2782 PF12848 ABC transporter ABCA12_2782 PF00005 ABC transporter ABCA12_2782 PF16326 ABC transporter C-terminal domain ABCA12_2784 PF03279 Bacterial lipid A biosynthesis acyltransferase ABCA12_2786 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABCA12_2786 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABCA12_2790 PF01416 tRNA pseudouridine synthase ABCA12_2792 PF01176 Translation initiation factor 1A / IF-1 ABCA12_2795 PF00180 Isocitrate/isopropylmalate dehydrogenase ABCA12_2797 PF00694 Aconitase C-terminal domain ABCA12_2798 PF00330 Aconitase family (aconitate hydratase) ABCA12_2800 PF03466 LysR substrate binding domain ABCA12_2800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_2805 PF00293 NUDIX domain ABCA12_2806 PF01590 GAF domain ABCA12_2806 PF02896 PEP-utilising enzyme, TIM barrel domain ABCA12_2806 PF00391 PEP-utilising enzyme, mobile domain ABCA12_2806 PF05524 PEP-utilising enzyme, N-terminal ABCA12_2808 PF00141 Peroxidase ABCA12_2809 PF04134 Protein of unknown function, DUF393 ABCA12_2811 PF12706 Beta-lactamase superfamily domain ABCA12_2812 PF03466 LysR substrate binding domain ABCA12_2812 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_2816 PF01479 S4 domain ABCA12_2816 PF00849 RNA pseudouridylate synthase ABCA12_2817 PF00575 S1 RNA binding domain ABCA12_2817 PF10150 Ribonuclease E/G family ABCA12_2817 PF12111 Polyribonucleotide phosphorylase C terminal ABCA12_2818 PF13193 AMP-binding enzyme C-terminal domain ABCA12_2818 PF00501 AMP-binding enzyme ABCA12_2820 PF04055 Radical SAM superfamily ABCA12_2820 PF06969 HemN C-terminal domain ABCA12_2824 PF03109 ABC1 family ABCA12_2825 PF01197 Ribosomal protein L31 ABCA12_2827 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABCA12_2833 PF01613 Flavin reductase like domain ABCA12_2835 PF00375 Sodium:dicarboxylate symporter family ABCA12_2836 PF13247 4Fe-4S dicluster domain ABCA12_2836 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABCA12_2836 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABCA12_2840 PF00753 Metallo-beta-lactamase superfamily ABCA12_2844 PF01177 Asp/Glu/Hydantoin racemase ABCA12_2848 PF08281 Sigma-70, region 4 ABCA12_2848 PF04542 Sigma-70 region 2 ABCA12_2850 PF05114 Protein of unknown function (DUF692) ABCA12_2853 PF01810 LysE type translocator ABCA12_2854 PF01206 Sulfurtransferase TusA ABCA12_2855 PF00571 CBS domain ABCA12_2855 PF03471 Transporter associated domain ABCA12_2856 PF00795 Carbon-nitrogen hydrolase ABCA12_2858 PF08334 Type II secretion system (T2SS), protein G ABCA12_2858 PF07963 Prokaryotic N-terminal methylation motif ABCA12_2859 PF00482 Type II secretion system (T2SS), protein F ABCA12_2860 PF00270 DEAD/DEAH box helicase ABCA12_2860 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABCA12_2860 PF18074 Primosomal protein N C-terminal domain ABCA12_2860 PF17764 3′ DNA-binding domain (3′BD) ABCA12_2860 PF00271 Helicase conserved C-terminal domain ABCA12_2861 PF00999 Sodium/hydrogen exchanger family ABCA12_2861 PF02254 TrkA-N domain ABCA12_2862 PF01430 Hsp33 protein ABCA12_2864 PF00226 DnaJ domain ABCA12_2864 PF01556 DnaJ C terminal domain ABCA12_2866 PF01544 CorA-like Mg2+ transporter protein ABCA12_2867 PF00013 KH domain ABCA12_2867 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABCA12_2867 PF01138 3' exoribonuclease family, domain 1 ABCA12_2867 PF03725 3' exoribonuclease family, domain 2 ABCA12_2867 PF00575 S1 RNA binding domain ABCA12_2868 PF00312 Ribosomal protein S15 ABCA12_2869 PF00144 Beta-lactamase ABCA12_2870 PF13538 UvrD-like helicase C-terminal domain ABCA12_2873 PF17946 RecC C-terminal domain ABCA12_2876 PF03976 Polyphosphate kinase 2 (PPK2) ABCA12_2878 PF01209 ubiE/COQ5 methyltransferase family ABCA12_2880 PF03109 ABC1 family ABCA12_2883 PF01494 FAD binding domain ABCA12_2884 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABCA12_2886 PF01502 Phosphoribosyl-AMP cyclohydrolase ABCA12_2889 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABCA12_2889 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABCA12_2889 PF00361 Proton-conducting membrane transporter ABCA12_2889 PF13244 Domain of unknown function (DUF4040) ABCA12_2890 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABCA12_2891 PF00361 Proton-conducting membrane transporter ABCA12_2892 PF01899 Na+/H+ ion antiporter subunit ABCA12_2893 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABCA12_2894 PF03334 Na+/H+ antiporter subunit ABCA12_2895 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_2895 PF13007 Transposase C of IS166 homeodomain ABCA12_2895 PF13817 IS66 C-terminal element ABCA12_2895 PF03050 Transposase IS66 family ABCA12_2898 PF02033 Ribosome-binding factor A ABCA12_2899 PF08364 Bacterial translation initiation factor IF-2 associated region ABCA12_2899 PF04760 Translation initiation factor IF-2, N-terminal region ABCA12_2899 PF00009 Elongation factor Tu GTP binding domain ABCA12_2899 PF11987 Translation-initiation factor 2 ABCA12_2900 PF13184 NusA-like KH domain ABCA12_2900 PF00575 S1 RNA binding domain ABCA12_2900 PF08529 NusA N-terminal domain ABCA12_2901 PF02576 RimP N-terminal domain ABCA12_2901 PF17384 RimP C-terminal SH3 domain ABCA12_2902 PF03840 Preprotein translocase SecG subunit ABCA12_2903 PF00121 Triosephosphate isomerase ABCA12_2904 PF00437 Type II/IV secretion system protein ABCA12_2904 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ABCA12_2905 PF00482 Type II secretion system (T2SS), protein F ABCA12_2906 PF01478 Type IV leader peptidase family ABCA12_2906 PF06750 Bacterial Peptidase A24 N-terminal domain ABCA12_2907 PF01121 Dephospho-CoA kinase ABCA12_2909 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABCA12_2909 PF00588 SpoU rRNA Methylase family ABCA12_2910 PF06865 Pyrimidine/purine nucleoside phosphorylase ABCA12_2911 PF02463 RecF/RecN/SMC N terminal domain ABCA12_2912 PF02622 Uncharacterized ACR, COG1678 ABCA12_2913 PF03652 Holliday junction resolvase ABCA12_2914 PF13533 Biotin-lipoyl like ABCA12_2918 PF01066 CDP-alcohol phosphatidyltransferase ABCA12_2920 PF01541 GIY-YIG catalytic domain ABCA12_2920 PF08459 UvrC Helix-hairpin-helix N-terminal ABCA12_2920 PF02151 UvrB/uvrC motif ABCA12_2924 PF00990 Diguanylate cyclase, GGDEF domain ABCA12_2925 PF00378 Enoyl-CoA hydratase/isomerase ABCA12_2925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABCA12_2925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABCA12_2926 PF02803 Thiolase, C-terminal domain ABCA12_2926 PF00108 Thiolase, N-terminal domain ABCA12_2928 PF08000 Bacterial PH domain ABCA12_2928 PF11724 YvbH-like oligomerisation region ABCA12_2931 PF00005 ABC transporter ABCA12_2931 PF00664 ABC transporter transmembrane region ABCA12_2935 PF01323 DSBA-like thioredoxin domain ABCA12_2938 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2938 PF00183 Hsp90 protein ABCA12_2941 PF13726 Na+-H+ antiporter family ABCA12_2941 PF03553 Na+/H+ antiporter family ABCA12_2945 PF04997 RNA polymerase Rpb1, domain 1 ABCA12_2945 PF04998 RNA polymerase Rpb1, domain 5 ABCA12_2945 PF04983 RNA polymerase Rpb1, domain 3 ABCA12_2945 PF05000 RNA polymerase Rpb1, domain 4 ABCA12_2945 PF00623 RNA polymerase Rpb1, domain 2 ABCA12_2946 PF04560 RNA polymerase Rpb2, domain 7 ABCA12_2946 PF10385 RNA polymerase beta subunit external 1 domain ABCA12_2946 PF04565 RNA polymerase Rpb2, domain 3 ABCA12_2946 PF04561 RNA polymerase Rpb2, domain 2 ABCA12_2946 PF04563 RNA polymerase beta subunit ABCA12_2946 PF00562 RNA polymerase Rpb2, domain 6 ABCA12_2947 PF16320 Ribosomal protein L7/L12 dimerisation domain ABCA12_2947 PF00542 Ribosomal protein L7/L12 C-terminal domain ABCA12_2948 PF00466 Ribosomal protein L10 ABCA12_2949 PF00687 Ribosomal protein L1p/L10e family ABCA12_2950 PF03946 Ribosomal protein L11, N-terminal domain ABCA12_2950 PF00298 Ribosomal protein L11, RNA binding domain ABCA12_2951 PF00467 KOW motif ABCA12_2951 PF02357 Transcription termination factor nusG ABCA12_2952 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABCA12_2953 PF03143 Elongation factor Tu C-terminal domain ABCA12_2953 PF03144 Elongation factor Tu domain 2 ABCA12_2953 PF00009 Elongation factor Tu GTP binding domain ABCA12_2954 PF00425 chorismate binding enzyme ABCA12_2954 PF04715 Anthranilate synthase component I, N terminal region ABCA12_2955 PF13419 Haloacid dehalogenase-like hydrolase ABCA12_2956 PF12401 Protein of unknown function (DUF2662) ABCA12_2956 PF00498 FHA domain ABCA12_2957 PF03958 Bacterial type II/III secretion system short domain ABCA12_2957 PF00263 Bacterial type II and III secretion system protein ABCA12_2960 PF00816 H-NS histone family ABCA12_2966 PF03900 Porphobilinogen deaminase, C-terminal domain ABCA12_2966 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABCA12_2967 PF04397 LytTr DNA-binding domain ABCA12_2967 PF00072 Response regulator receiver domain ABCA12_2968 PF07694 5TMR of 5TMR-LYT ABCA12_2968 PF06580 Histidine kinase ABCA12_2968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2969 PF00206 Lyase ABCA12_2969 PF14698 Argininosuccinate lyase C-terminal ABCA12_2970 PF04362 Bacterial Fe(2+) trafficking ABCA12_2971 PF01895 PhoU domain ABCA12_2972 PF13667 ThiC-associated domain ABCA12_2972 PF01964 Radical SAM ThiC family ABCA12_2974 PF00149 Calcineurin-like phosphoesterase ABCA12_2975 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABCA12_2976 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABCA12_2977 PF01098 Cell cycle protein ABCA12_2978 PF08245 Mur ligase middle domain ABCA12_2978 PF02875 Mur ligase family, glutamate ligase domain ABCA12_2980 PF02421 Ferrous iron transport protein B ABCA12_2980 PF07664 Ferrous iron transport protein B C terminus ABCA12_2980 PF07670 Nucleoside recognition ABCA12_2982 PF02899 Phage integrase, N-terminal SAM-like domain ABCA12_2982 PF00589 Phage integrase family ABCA12_2983 PF10411 Disulfide bond isomerase protein N-terminus ABCA12_2983 PF13098 Thioredoxin-like domain ABCA12_2984 PF03447 Homoserine dehydrogenase, NAD binding domain ABCA12_2984 PF00742 Homoserine dehydrogenase ABCA12_2984 PF01842 ACT domain ABCA12_2985 PF00291 Pyridoxal-phosphate dependent enzyme ABCA12_2988 PF00768 D-alanyl-D-alanine carboxypeptidase ABCA12_2989 PF00072 Response regulator receiver domain ABCA12_2989 PF00196 Bacterial regulatory proteins, luxR family ABCA12_2991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_2991 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_2992 PF02954 Bacterial regulatory protein, Fis family ABCA12_2992 PF00158 Sigma-54 interaction domain ABCA12_2992 PF00072 Response regulator receiver domain ABCA12_2993 PF17820 PDZ domain ABCA12_2993 PF01471 Putative peptidoglycan binding domain ABCA12_2993 PF03572 Peptidase family S41 ABCA12_2994 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABCA12_2994 PF01676 Metalloenzyme superfamily ABCA12_2995 PF03739 Lipopolysaccharide export system permease LptF/LptG ABCA12_2996 PF03739 Lipopolysaccharide export system permease LptF/LptG ABCA12_2997 PF02789 Cytosol aminopeptidase family, N-terminal domain ABCA12_2997 PF00883 Cytosol aminopeptidase family, catalytic domain ABCA12_3000 PF00677 Lumazine binding domain ABCA12_3001 PF00230 Major intrinsic protein ABCA12_3003 PF01872 RibD C-terminal domain ABCA12_3003 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABCA12_3004 PF03477 ATP cone domain ABCA12_3005 PF00909 Ammonium Transporter Family ABCA12_3006 PF00543 Nitrogen regulatory protein P-II ABCA12_3008 PF01078 Magnesium chelatase, subunit ChlI ABCA12_3008 PF13335 Magnesium chelatase, subunit ChlI C-terminal ABCA12_3011 PF03573 outer membrane porin, OprD family ABCA12_3012 PF00719 Inorganic pyrophosphatase ABCA12_3015 PF13193 AMP-binding enzyme C-terminal domain ABCA12_3015 PF00501 AMP-binding enzyme ABCA12_3016 PF00521 DNA gyrase/topoisomerase IV, subunit A ABCA12_3016 PF03989 DNA gyrase C-terminal domain, beta-propeller ABCA12_3017 PF03458 UPF0126 domain ABCA12_3018 PF02810 SEC-C motif ABCA12_3019 PF03471 Transporter associated domain ABCA12_3019 PF03741 Integral membrane protein TerC family ABCA12_3020 PF03641 Possible lysine decarboxylase ABCA12_3022 PF07690 Major Facilitator Superfamily ABCA12_3025 PF11799 impB/mucB/samB family C-terminal domain ABCA12_3025 PF00817 impB/mucB/samB family ABCA12_3025 PF11798 IMS family HHH motif ABCA12_3026 PF00072 Response regulator receiver domain ABCA12_3026 PF00486 Transcriptional regulatory protein, C terminal ABCA12_3027 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_3027 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_3027 PF00672 HAMP domain ABCA12_3028 PF06123 Inner membrane protein CreD ABCA12_3032 PF11842 Domain of unknown function (DUF3362) ABCA12_3032 PF08497 Radical SAM N-terminal ABCA12_3032 PF04055 Radical SAM superfamily ABCA12_3033 PF07690 Major Facilitator Superfamily ABCA12_3034 PF07690 Major Facilitator Superfamily ABCA12_3038 PF03358 NADPH-dependent FMN reductase ABCA12_3042 PF00291 Pyridoxal-phosphate dependent enzyme ABCA12_3043 PF02690 Na+/Pi-cotransporter ABCA12_3044 PF02028 BCCT, betaine/carnitine/choline family transporter ABCA12_3048 PF00474 Sodium:solute symporter family ABCA12_3049 PF04341 Protein of unknown function, DUF485 ABCA12_3050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABCA12_3050 PF00512 His Kinase A (phospho-acceptor) domain ABCA12_3050 PF09308 LuxQ, periplasmic ABCA12_3050 PF00072 Response regulator receiver domain ABCA12_3054 PF01327 Polypeptide deformylase ABCA12_3055 PF01476 LysM domain ABCA12_3056 PF02481 DNA recombination-mediator protein A ABCA12_3056 PF17782 DprA winged helix domain ABCA12_3057 PF01300 Telomere recombination ABCA12_3059 PF00440 Bacterial regulatory proteins, tetR family ABCA12_3063 PF00255 Glutathione peroxidase ABCA12_3066 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABCA12_3067 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABCA12_3067 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABCA12_3068 PF00231 ATP synthase ABCA12_3069 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABCA12_3069 PF00306 ATP synthase alpha/beta chain, C terminal domain ABCA12_3069 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABCA12_3070 PF00213 ATP synthase delta (OSCP) subunit ABCA12_3071 PF00430 ATP synthase B/B' CF(0) ABCA12_3072 PF00137 ATP synthase subunit C ABCA12_3073 PF00119 ATP synthase A chain ABCA12_3075 PF01297 Zinc-uptake complex component A periplasmic ABCA12_3077 PF00005 ABC transporter ABCA12_3078 PF00950 ABC 3 transport family ABCA12_3079 PF01810 LysE type translocator ABCA12_3080 PF04261 Dyp-type peroxidase family ABCA12_3082 PF00390 Malic enzyme, N-terminal domain ABCA12_3082 PF03949 Malic enzyme, NAD binding domain ABCA12_3083 PF03485 Arginyl tRNA synthetase N terminal domain ABCA12_3083 PF05746 DALR anticodon binding domain ABCA12_3083 PF00750 tRNA synthetases class I (R) ABCA12_3087 PF02678 Pirin ABCA12_3087 PF05726 Pirin C-terminal cupin domain ABCA12_3089 PF00990 Diguanylate cyclase, GGDEF domain ABCA12_3089 PF00072 Response regulator receiver domain ABCA12_3090 PF00117 Glutamine amidotransferase class-I ABCA12_3090 PF00958 GMP synthase C terminal domain ABCA12_3090 PF02540 NAD synthase ABCA12_3091 PF04286 Protein of unknown function (DUF445) ABCA12_3096 PF09335 SNARE associated Golgi protein ABCA12_3099 PF13614 AAA domain ABCA12_3101 PF01722 BolA-like protein ABCA12_3106 PF07120 Protein of unknown function (DUF1376) ABCA12_3109 PF00293 NUDIX domain ABCA12_3119 PF13657 HipA N-terminal domain ABCA12_3119 PF07804 HipA-like C-terminal domain ABCA12_3120 PF00176 SNF2 family N-terminal domain ABCA12_3120 PF00271 Helicase conserved C-terminal domain ABCA12_3120 PF12419 SNF2 Helicase protein ABCA12_3123 PF13737 Transposase DDE domain ABCA12_3130 PF13007 Transposase C of IS166 homeodomain ABCA12_3130 PF13817 IS66 C-terminal element ABCA12_3130 PF03050 Transposase IS66 family ABCA12_3130 PF13005 zinc-finger binding domain of transposase IS66 ABCA12_3131 PF00753 Metallo-beta-lactamase superfamily ABCA12_3131 PF14863 Alkyl sulfatase dimerisation ABCA12_3131 PF14864 Alkyl sulfatase C-terminal ABCA12_3133 PF13737 Transposase DDE domain ABCA12_3139 PF00083 Sugar (and other) transporter ABCA12_3139 PF07690 Major Facilitator Superfamily ABCA12_3140 PF00378 Enoyl-CoA hydratase/isomerase ABCA12_3141 PF00378 Enoyl-CoA hydratase/isomerase ABCA12_3142 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_3142 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_3142 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_3143 PF00501 AMP-binding enzyme ABCA12_3143 PF13193 AMP-binding enzyme C-terminal domain ABCA12_3144 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABCA12_3144 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABCA12_3145 PF00171 Aldehyde dehydrogenase family ABCA12_3147 PF00324 Amino acid permease ABCA12_3148 PF01042 Endoribonuclease L-PSP ABCA12_3149 PF00842 Alanine racemase, C-terminal domain ABCA12_3149 PF01168 Alanine racemase, N-terminal domain ABCA12_3150 PF01266 FAD dependent oxidoreductase ABCA12_3151 PF01037 Lrp/AsnC ligand binding domain ABCA12_3155 PF00849 RNA pseudouridylate synthase ABCA12_3159 PF12833 Helix-turn-helix domain ABCA12_3165 PF00330 Aconitase family (aconitate hydratase) ABCA12_3165 PF00694 Aconitase C-terminal domain ABCA12_3166 PF00285 Citrate synthase, C-terminal domain ABCA12_3168 PF07729 FCD domain ABCA12_3168 PF00392 Bacterial regulatory proteins, gntR family ABCA12_3169 PF00155 Aminotransferase class I and II ABCA12_3170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABCA12_3170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABCA12_3170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABCA12_3170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABCA12_3171 PF16363 GDP-mannose 4,6 dehydratase ABCA12_3172 PF00342 Phosphoglucose isomerase ABCA12_3173 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABCA12_3173 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABCA12_3173 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABCA12_3174 PF00483 Nucleotidyl transferase ABCA12_3175 PF02719 Polysaccharide biosynthesis protein ABCA12_3177 PF00953 Glycosyl transferase family 4 ABCA12_3178 PF01370 NAD dependent epimerase/dehydratase family ABCA12_3179 PF13477 Glycosyl transferase 4-like ABCA12_3179 PF00534 Glycosyl transferases group 1 ABCA12_3183 PF00534 Glycosyl transferases group 1 ABCA12_3183 PF13439 Glycosyltransferase Family 4 ABCA12_3185 PF02350 UDP-N-acetylglucosamine 2-epimerase ABCA12_3187 PF13439 Glycosyltransferase Family 4 ABCA12_3187 PF00534 Glycosyl transferases group 1 ABCA12_3188 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ABCA12_3189 PF00132 Bacterial transferase hexapeptide (six repeats) ABCA12_3190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABCA12_3190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABCA12_3191 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABCA12_3191 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABCA12_3191 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABCA12_3192 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ABCA12_3192 PF10531 SLBB domain ABCA12_3192 PF02563 Polysaccharide biosynthesis/export protein ABCA12_3193 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABCA12_3194 PF13614 AAA domain ABCA12_3194 PF13807 G-rich domain on putative tyrosine kinase ABCA12_3194 PF02706 Chain length determinant protein ABCA12_3195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABCA12_3195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCA12_3196 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCA12_3196 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ABCA12_3197 PF03023 Lipid II flippase MurJ ABCA12_3198 PF01510 N-acetylmuramoyl-L-alanine amidase ABCA12_3199 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABCA12_3199 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABCA12_3201 PF03725 3' exoribonuclease family, domain 2 ABCA12_3201 PF01138 3' exoribonuclease family, domain 1 ABCA12_3202 PF00487 Fatty acid desaturase ABCA12_3203 PF00970 Oxidoreductase FAD-binding domain ABCA12_3203 PF00175 Oxidoreductase NAD-binding domain ABCA12_3203 PF00111 2Fe-2S iron-sulfur cluster binding domain ABCA12_3204 PF00440 Bacterial regulatory proteins, tetR family ABCA12_3205 PF08360 QacR-like protein, C-terminal region ABCA12_3205 PF00440 Bacterial regulatory proteins, tetR family ABCA12_3206 PF01323 DSBA-like thioredoxin domain ABCA12_3208 PF13419 Haloacid dehalogenase-like hydrolase ABCA12_3209 PF00106 short chain dehydrogenase ABCA12_3211 PF00583 Acetyltransferase (GNAT) family ABCA12_3211 PF00696 Amino acid kinase family ABCA12_3212 PF09084 NMT1/THI5 like ABCA12_3213 PF00296 Luciferase-like monooxygenase ABCA12_3214 PF00528 Binding-protein-dependent transport system inner membrane component ABCA12_3215 PF00005 ABC transporter ABCA12_3216 PF17938 Tetracyclin repressor-like, C-terminal domain ABCA12_3216 PF00440 Bacterial regulatory proteins, tetR family ABCA12_3219 PF06574 FAD synthetase ABCA12_3219 PF01687 Riboflavin kinase ABCA12_3220 PF08264 Anticodon-binding domain of tRNA ABCA12_3220 PF00133 tRNA synthetases class I (I, L, M and V) ABCA12_3220 PF06827 Zinc finger found in FPG and IleRS ABCA12_3221 PF01252 Signal peptidase (SPase) II ABCA12_3222 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABCA12_3223 PF03358 NADPH-dependent FMN reductase ABCA12_3224 PF07517 SecA DEAD-like domain ABCA12_3224 PF07516 SecA Wing and Scaffold domain ABCA12_3224 PF01043 SecA preprotein cross-linking domain ABCA12_3224 PF02810 SEC-C motif ABCA12_3225 PF13737 Transposase DDE domain ABCA12_3227 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABCA12_3228 PF07859 alpha/beta hydrolase fold ABCA12_3231 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_3231 PF03466 LysR substrate binding domain ABCA12_3232 PF01025 GrpE ABCA12_3233 PF00012 Hsp70 protein ABCA12_3242 PF13406 Transglycosylase SLT domain ABCA12_3243 PF02222 ATP-grasp domain ABCA12_3243 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABCA12_3244 PF00731 AIR carboxylase ABCA12_3247 PF08245 Mur ligase middle domain ABCA12_3247 PF01225 Mur ligase family, catalytic domain ABCA12_3247 PF02875 Mur ligase family, glutamate ligase domain ABCA12_3248 PF00106 short chain dehydrogenase ABCA12_3251 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABCA12_3251 PF02770 Acyl-CoA dehydrogenase, middle domain ABCA12_3251 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABCA12_3252 PF03466 LysR substrate binding domain ABCA12_3252 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABCA12_3255 PF03741 Integral membrane protein TerC family ABCA12_3257 PF03738 Glutathionylspermidine synthase preATP-grasp ABCA12_3259 PF01979 Amidohydrolase family ABCA12_3261 PF00156 Phosphoribosyl transferase domain ABCA12_3263 PF13098 Thioredoxin-like domain ABCA12_3263 PF10411 Disulfide bond isomerase protein N-terminus ABCA12_3264 PF00437 Type II/IV secretion system protein ABCA12_3265 PF12631 MnmE helical domain ABCA12_3265 PF10396 GTP-binding protein TrmE N-terminus ABCA12_3265 PF01926 50S ribosome-binding GTPase ABCA12_3266 PF14849 YidC periplasmic domain ABCA12_3266 PF02096 60Kd inner membrane protein ABCA12_3267 PF01809 Putative membrane protein insertion efficiency factor ABCA12_3268 PF00825 Ribonuclease P