locus-tag class description J5N61_00005 PF00308 Bacterial dnaA protein J5N61_00005 PF08299 Bacterial dnaA protein helix-turn-helix J5N61_00005 PF11638 DnaA N-terminal domain J5N61_00020 PF02463 RecF/RecN/SMC N terminal domain J5N61_00025 PF00204 DNA gyrase B J5N61_00025 PF00986 DNA gyrase B subunit, carboxyl terminus J5N61_00025 PF18053 DNA gyrase B subunit insert domain J5N61_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_00025 PF01751 Toprim domain J5N61_00035 PF09335 SNARE associated Golgi protein J5N61_00040 PF00005 ABC transporter J5N61_00040 PF12848 ABC transporter J5N61_00070 PF01521 Iron-sulphur cluster biosynthesis J5N61_00075 PF03702 Anhydro-N-acetylmuramic acid kinase J5N61_00080 PF00579 tRNA synthetases class I (W and Y) J5N61_00120 PF03358 NADPH-dependent FMN reductase J5N61_00125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J5N61_00130 PF01252 Signal peptidase (SPase) II J5N61_00135 PF08264 Anticodon-binding domain of tRNA J5N61_00135 PF00133 tRNA synthetases class I (I, L, M and V) J5N61_00135 PF06827 Zinc finger found in FPG and IleRS J5N61_00140 PF06574 FAD synthetase J5N61_00140 PF01687 Riboflavin kinase J5N61_00155 PF08362 YcdC-like protein, C-terminal region J5N61_00155 PF00440 Bacterial regulatory proteins, tetR family J5N61_00160 PF00005 ABC transporter J5N61_00165 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_00170 PF00296 Luciferase-like monooxygenase J5N61_00175 PF09084 NMT1/THI5 like J5N61_00180 PF09084 NMT1/THI5 like J5N61_00185 PF00696 Amino acid kinase family J5N61_00185 PF00583 Acetyltransferase (GNAT) family J5N61_00195 PF00106 short chain dehydrogenase J5N61_00200 PF13419 Haloacid dehalogenase-like hydrolase J5N61_00210 PF01323 DSBA-like thioredoxin domain J5N61_00215 PF00440 Bacterial regulatory proteins, tetR family J5N61_00215 PF08360 QacR-like protein, C-terminal region J5N61_00220 PF00440 Bacterial regulatory proteins, tetR family J5N61_00225 PF00970 Oxidoreductase FAD-binding domain J5N61_00225 PF00111 2Fe-2S iron-sulfur cluster binding domain J5N61_00225 PF00175 Oxidoreductase NAD-binding domain J5N61_00230 PF00487 Fatty acid desaturase J5N61_00235 PF01138 3' exoribonuclease family, domain 1 J5N61_00235 PF03725 3' exoribonuclease family, domain 2 J5N61_00250 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J5N61_00250 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J5N61_00255 PF01510 N-acetylmuramoyl-L-alanine amidase J5N61_00260 PF03023 Lipid II flippase MurJ J5N61_00265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J5N61_00265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J5N61_00270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J5N61_00270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J5N61_00275 PF02350 UDP-N-acetylglucosamine 2-epimerase J5N61_00280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J5N61_00280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J5N61_00280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J5N61_00285 PF00132 Bacterial transferase hexapeptide (six repeats) J5N61_00300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5N61_00300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5N61_00315 PF02397 Bacterial sugar transferase J5N61_00320 PF14602 Hexapeptide repeat of succinyl-transferase J5N61_00320 PF17836 PglD N-terminal domain J5N61_00320 PF00132 Bacterial transferase hexapeptide (six repeats) J5N61_00325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J5N61_00330 PF02719 Polysaccharide biosynthesis protein J5N61_00335 PF13614 AAA domain J5N61_00335 PF13807 G-rich domain on putative tyrosine kinase J5N61_00335 PF02706 Chain length determinant protein J5N61_00340 PF01451 Low molecular weight phosphotyrosine protein phosphatase J5N61_00345 PF18412 Outer-membrane lipoprotein Wza C-terminal domain J5N61_00345 PF02563 Polysaccharide biosynthesis/export protein J5N61_00345 PF10531 SLBB domain J5N61_00350 PF01943 Polysaccharide biosynthesis protein J5N61_00355 PF02350 UDP-N-acetylglucosamine 2-epimerase J5N61_00370 PF13439 Glycosyltransferase Family 4 J5N61_00370 PF00534 Glycosyl transferases group 1 J5N61_00380 PF02397 Bacterial sugar transferase J5N61_00385 PF00483 Nucleotidyl transferase J5N61_00390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J5N61_00390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J5N61_00390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J5N61_00395 PF00342 Phosphoglucose isomerase J5N61_00400 PF16363 GDP-mannose 4,6 dehydratase J5N61_00405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J5N61_00405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J5N61_00405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J5N61_00405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J5N61_00410 PF00155 Aminotransferase class I and II J5N61_00415 PF07729 FCD domain J5N61_00415 PF00392 Bacterial regulatory proteins, gntR family J5N61_00425 PF00285 Citrate synthase, C-terminal domain J5N61_00430 PF00330 Aconitase family (aconitate hydratase) J5N61_00430 PF00694 Aconitase C-terminal domain J5N61_00460 PF12833 Helix-turn-helix domain J5N61_00480 PF00849 RNA pseudouridylate synthase J5N61_00500 PF01037 Lrp/AsnC ligand binding domain J5N61_00505 PF01266 FAD dependent oxidoreductase J5N61_00510 PF01168 Alanine racemase, N-terminal domain J5N61_00510 PF00842 Alanine racemase, C-terminal domain J5N61_00515 PF01042 Endoribonuclease L-PSP J5N61_00520 PF00324 Amino acid permease J5N61_00530 PF00171 Aldehyde dehydrogenase family J5N61_00535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5N61_00535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5N61_00540 PF00501 AMP-binding enzyme J5N61_00540 PF13193 AMP-binding enzyme C-terminal domain J5N61_00545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_00545 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_00545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_00550 PF00378 Enoyl-CoA hydratase/isomerase J5N61_00555 PF00378 Enoyl-CoA hydratase/isomerase J5N61_00560 PF00083 Sugar (and other) transporter J5N61_00560 PF07690 Major Facilitator Superfamily J5N61_00570 PF02560 Cyanate lyase C-terminal domain J5N61_00575 PF02416 mttA/Hcf106 family J5N61_00580 PF02416 mttA/Hcf106 family J5N61_00585 PF00902 Sec-independent protein translocase protein (TatC) J5N61_00590 PF01590 GAF domain J5N61_00590 PF00158 Sigma-54 interaction domain J5N61_00590 PF02954 Bacterial regulatory protein, Fis family J5N61_00600 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_00600 PF18113 Rubredoxin binding C-terminal domain J5N61_00605 PF00005 ABC transporter J5N61_00610 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_00615 PF00005 ABC transporter J5N61_00620 PF01925 Sulfite exporter TauE/SafE J5N61_00625 PF00753 Metallo-beta-lactamase superfamily J5N61_00670 PF13737 Transposase DDE domain J5N61_00685 PF12419 SNF2 Helicase protein J5N61_00685 PF00271 Helicase conserved C-terminal domain J5N61_00685 PF00176 SNF2 family N-terminal domain J5N61_00690 PF13657 HipA N-terminal domain J5N61_00690 PF07804 HipA-like C-terminal domain J5N61_00755 PF00145 C-5 cytosine-specific DNA methylase J5N61_00760 PF04546 Sigma-70, non-essential region J5N61_00760 PF03979 Sigma-70 factor, region 1.1 J5N61_00760 PF00140 Sigma-70 factor, region 1.2 J5N61_00760 PF04542 Sigma-70 region 2 J5N61_00760 PF04539 Sigma-70 region 3 J5N61_00760 PF04545 Sigma-70, region 4 J5N61_00785 PF01695 IstB-like ATP binding protein J5N61_00790 PF07120 Protein of unknown function (DUF1376) J5N61_00825 PF01722 BolA-like protein J5N61_00835 PF13614 AAA domain J5N61_00850 PF09335 SNARE associated Golgi protein J5N61_00860 PF04286 Protein of unknown function (DUF445) J5N61_00865 PF00117 Glutamine amidotransferase class-I J5N61_00865 PF00958 GMP synthase C terminal domain J5N61_00865 PF02540 NAD synthase J5N61_00870 PF14338 Mrr N-terminal domain J5N61_00870 PF04471 Restriction endonuclease J5N61_00875 PF02678 Pirin J5N61_00875 PF05726 Pirin C-terminal cupin domain J5N61_00895 PF05746 DALR anticodon binding domain J5N61_00895 PF00750 tRNA synthetases class I (R) J5N61_00895 PF03485 Arginyl tRNA synthetase N terminal domain J5N61_00900 PF00390 Malic enzyme, N-terminal domain J5N61_00900 PF03949 Malic enzyme, NAD binding domain J5N61_00910 PF04261 Dyp-type peroxidase family J5N61_00915 PF01810 LysE type translocator J5N61_00920 PF00950 ABC 3 transport family J5N61_00925 PF00005 ABC transporter J5N61_00935 PF01297 Zinc-uptake complex component A periplasmic J5N61_00945 PF00119 ATP synthase A chain J5N61_00950 PF00137 ATP synthase subunit C J5N61_00955 PF00430 ATP synthase B/B' CF(0) J5N61_00960 PF00213 ATP synthase delta (OSCP) subunit J5N61_00965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5N61_00965 PF00306 ATP synthase alpha/beta chain, C terminal domain J5N61_00965 PF02874 ATP synthase alpha/beta family, beta-barrel domain J5N61_00970 PF00231 ATP synthase J5N61_00975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5N61_00975 PF02874 ATP synthase alpha/beta family, beta-barrel domain J5N61_00980 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J5N61_01005 PF00255 Glutathione peroxidase J5N61_01015 PF01300 Telomere recombination J5N61_01020 PF02481 DNA recombination-mediator protein A J5N61_01020 PF17782 DprA winged helix domain J5N61_01025 PF01476 LysM domain J5N61_01030 PF01327 Polypeptide deformylase J5N61_01050 PF00072 Response regulator receiver domain J5N61_01050 PF09308 LuxQ, periplasmic J5N61_01050 PF00512 His Kinase A (phospho-acceptor) domain J5N61_01050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_01055 PF04341 Protein of unknown function, DUF485 J5N61_01060 PF00474 Sodium:solute symporter family J5N61_01080 PF02028 BCCT, betaine/carnitine/choline family transporter J5N61_01115 PF00291 Pyridoxal-phosphate dependent enzyme J5N61_01135 PF03358 NADPH-dependent FMN reductase J5N61_01155 PF07690 Major Facilitator Superfamily J5N61_01160 PF11842 Domain of unknown function (DUF3362) J5N61_01160 PF08497 Radical SAM N-terminal J5N61_01160 PF04055 Radical SAM superfamily J5N61_01180 PF06123 Inner membrane protein CreD J5N61_01185 PF00672 HAMP domain J5N61_01185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_01185 PF00512 His Kinase A (phospho-acceptor) domain J5N61_01190 PF00486 Transcriptional regulatory protein, C terminal J5N61_01190 PF00072 Response regulator receiver domain J5N61_01195 PF00817 impB/mucB/samB family J5N61_01195 PF11799 impB/mucB/samB family C-terminal domain J5N61_01195 PF11798 IMS family HHH motif J5N61_01210 PF07690 Major Facilitator Superfamily J5N61_01220 PF03641 Possible lysine decarboxylase J5N61_01225 PF03471 Transporter associated domain J5N61_01225 PF03741 Integral membrane protein TerC family J5N61_01230 PF02810 SEC-C motif J5N61_01235 PF03458 UPF0126 domain J5N61_01240 PF00521 DNA gyrase/topoisomerase IV, subunit A J5N61_01240 PF03989 DNA gyrase C-terminal domain, beta-propeller J5N61_01245 PF00501 AMP-binding enzyme J5N61_01245 PF13193 AMP-binding enzyme C-terminal domain J5N61_01260 PF00719 Inorganic pyrophosphatase J5N61_01265 PF03573 outer membrane porin, OprD family J5N61_01280 PF13335 Magnesium chelatase, subunit ChlI C-terminal J5N61_01280 PF01078 Magnesium chelatase, subunit ChlI J5N61_01320 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_01330 PF00111 2Fe-2S iron-sulfur cluster binding domain J5N61_01340 PF00376 MerR family regulatory protein J5N61_01340 PF09278 MerR, DNA binding J5N61_01345 PF00403 Heavy-metal-associated domain J5N61_01350 PF01022 Bacterial regulatory protein, arsR family J5N61_01355 PF16916 Dimerisation domain of Zinc Transporter J5N61_01355 PF01545 Cation efflux family J5N61_01375 PF00899 ThiF family J5N61_01375 PF14461 Prokaryotic E2 family B J5N61_01415 PF13335 Magnesium chelatase, subunit ChlI C-terminal J5N61_01415 PF01078 Magnesium chelatase, subunit ChlI J5N61_01425 PF00543 Nitrogen regulatory protein P-II J5N61_01430 PF00909 Ammonium Transporter Family J5N61_01435 PF03477 ATP cone domain J5N61_01440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J5N61_01440 PF01872 RibD C-terminal domain J5N61_01450 PF00230 Major intrinsic protein J5N61_01455 PF00677 Lumazine binding domain J5N61_01470 PF02789 Cytosol aminopeptidase family, N-terminal domain J5N61_01470 PF00883 Cytosol aminopeptidase family, catalytic domain J5N61_01475 PF03739 Lipopolysaccharide export system permease LptF/LptG J5N61_01480 PF03739 Lipopolysaccharide export system permease LptF/LptG J5N61_01485 PF01676 Metalloenzyme superfamily J5N61_01485 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J5N61_01490 PF01471 Putative peptidoglycan binding domain J5N61_01490 PF03572 Peptidase family S41 J5N61_01490 PF17820 PDZ domain J5N61_01495 PF00158 Sigma-54 interaction domain J5N61_01495 PF00072 Response regulator receiver domain J5N61_01495 PF02954 Bacterial regulatory protein, Fis family J5N61_01500 PF00512 His Kinase A (phospho-acceptor) domain J5N61_01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_01505 PF00072 Response regulator receiver domain J5N61_01505 PF00196 Bacterial regulatory proteins, luxR family J5N61_01510 PF00768 D-alanyl-D-alanine carboxypeptidase J5N61_01525 PF00291 Pyridoxal-phosphate dependent enzyme J5N61_01530 PF00742 Homoserine dehydrogenase J5N61_01530 PF03447 Homoserine dehydrogenase, NAD binding domain J5N61_01530 PF01842 ACT domain J5N61_01535 PF10411 Disulfide bond isomerase protein N-terminus J5N61_01535 PF13098 Thioredoxin-like domain J5N61_01540 PF02899 Phage integrase, N-terminal SAM-like domain J5N61_01540 PF00589 Phage integrase family J5N61_01550 PF07670 Nucleoside recognition J5N61_01550 PF02421 Ferrous iron transport protein B J5N61_01550 PF07664 Ferrous iron transport protein B C terminus J5N61_01560 PF08245 Mur ligase middle domain J5N61_01560 PF02875 Mur ligase family, glutamate ligase domain J5N61_01565 PF01098 Cell cycle protein J5N61_01570 PF00749 tRNA synthetases class I (E and Q), catalytic domain J5N61_01575 PF01258 Prokaryotic dksA/traR C4-type zinc finger J5N61_01580 PF00149 Calcineurin-like phosphoesterase J5N61_01590 PF01964 Radical SAM ThiC family J5N61_01590 PF13667 ThiC-associated domain J5N61_01595 PF01895 PhoU domain J5N61_01605 PF04362 Bacterial Fe(2+) trafficking J5N61_01610 PF14698 Argininosuccinate lyase C-terminal J5N61_01610 PF00206 Lyase J5N61_01615 PF07694 5TMR of 5TMR-LYT J5N61_01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_01615 PF06580 Histidine kinase J5N61_01620 PF04397 LytTr DNA-binding domain J5N61_01620 PF00072 Response regulator receiver domain J5N61_01625 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J5N61_01625 PF03900 Porphobilinogen deaminase, C-terminal domain J5N61_01650 PF00816 H-NS histone family J5N61_01665 PF03958 Bacterial type II/III secretion system short domain J5N61_01665 PF00263 Bacterial type II and III secretion system protein J5N61_01670 PF00498 FHA domain J5N61_01670 PF12401 Protein of unknown function (DUF2662) J5N61_01675 PF13419 Haloacid dehalogenase-like hydrolase J5N61_01680 PF00425 chorismate binding enzyme J5N61_01680 PF04715 Anthranilate synthase component I, N terminal region J5N61_01705 PF03144 Elongation factor Tu domain 2 J5N61_01705 PF03143 Elongation factor Tu C-terminal domain J5N61_01705 PF00009 Elongation factor Tu GTP binding domain J5N61_01715 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J5N61_01720 PF00467 KOW motif J5N61_01720 PF02357 Transcription termination factor nusG J5N61_01725 PF00298 Ribosomal protein L11, RNA binding domain J5N61_01725 PF03946 Ribosomal protein L11, N-terminal domain J5N61_01730 PF00687 Ribosomal protein L1p/L10e family J5N61_01735 PF00466 Ribosomal protein L10 J5N61_01740 PF16320 Ribosomal protein L7/L12 dimerisation domain J5N61_01740 PF00542 Ribosomal protein L7/L12 C-terminal domain J5N61_01745 PF04561 RNA polymerase Rpb2, domain 2 J5N61_01745 PF04565 RNA polymerase Rpb2, domain 3 J5N61_01745 PF10385 RNA polymerase beta subunit external 1 domain J5N61_01745 PF00562 RNA polymerase Rpb2, domain 6 J5N61_01745 PF04560 RNA polymerase Rpb2, domain 7 J5N61_01745 PF04563 RNA polymerase beta subunit J5N61_01750 PF04997 RNA polymerase Rpb1, domain 1 J5N61_01750 PF00623 RNA polymerase Rpb1, domain 2 J5N61_01750 PF04983 RNA polymerase Rpb1, domain 3 J5N61_01750 PF05000 RNA polymerase Rpb1, domain 4 J5N61_01750 PF04998 RNA polymerase Rpb1, domain 5 J5N61_01770 PF03553 Na+/H+ antiporter family J5N61_01770 PF13726 Na+-H+ antiporter family J5N61_01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_01785 PF00183 Hsp90 protein J5N61_01805 PF01323 DSBA-like thioredoxin domain J5N61_01815 PF00664 ABC transporter transmembrane region J5N61_01815 PF00005 ABC transporter J5N61_01835 PF08000 Bacterial PH domain J5N61_01835 PF11724 YvbH-like oligomerisation region J5N61_01840 PF00108 Thiolase, N-terminal domain J5N61_01840 PF02803 Thiolase, C-terminal domain J5N61_01845 PF00378 Enoyl-CoA hydratase/isomerase J5N61_01845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J5N61_01845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J5N61_01850 PF00990 Diguanylate cyclase, GGDEF domain J5N61_01870 PF01541 GIY-YIG catalytic domain J5N61_01870 PF02151 UvrB/uvrC motif J5N61_01870 PF08459 UvrC Helix-hairpin-helix N-terminal J5N61_01880 PF01066 CDP-alcohol phosphatidyltransferase J5N61_01900 PF13533 Biotin-lipoyl like J5N61_01905 PF03652 Holliday junction resolvase J5N61_01910 PF02622 Uncharacterized ACR, COG1678 J5N61_01915 PF02463 RecF/RecN/SMC N terminal domain J5N61_01920 PF06865 Pyrimidine/purine nucleoside phosphorylase J5N61_01925 PF00588 SpoU rRNA Methylase family J5N61_01925 PF08032 RNA 2'-O ribose methyltransferase substrate binding J5N61_01935 PF01121 Dephospho-CoA kinase J5N61_01940 PF06750 Bacterial Peptidase A24 N-terminal domain J5N61_01940 PF01478 Type IV leader peptidase family J5N61_01945 PF00482 Type II secretion system (T2SS), protein F J5N61_01950 PF00437 Type II/IV secretion system protein J5N61_01950 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J5N61_01955 PF00121 Triosephosphate isomerase J5N61_01960 PF03840 Preprotein translocase SecG subunit J5N61_01980 PF02576 RimP N-terminal domain J5N61_01980 PF17384 RimP C-terminal SH3 domain J5N61_01985 PF13184 NusA-like KH domain J5N61_01985 PF08529 NusA N-terminal domain J5N61_01985 PF00575 S1 RNA binding domain J5N61_01990 PF00009 Elongation factor Tu GTP binding domain J5N61_01990 PF11987 Translation-initiation factor 2 J5N61_01990 PF08364 Bacterial translation initiation factor IF-2 associated region J5N61_01990 PF04760 Translation initiation factor IF-2, N-terminal region J5N61_01995 PF02033 Ribosome-binding factor A J5N61_02000 PF03334 Na+/H+ antiporter subunit J5N61_02005 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J5N61_02010 PF01899 Na+/H+ ion antiporter subunit J5N61_02015 PF00361 Proton-conducting membrane transporter J5N61_02020 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J5N61_02025 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J5N61_02025 PF13244 Domain of unknown function (DUF4040) J5N61_02025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J5N61_02025 PF00361 Proton-conducting membrane transporter J5N61_02040 PF01502 Phosphoribosyl-AMP cyclohydrolase J5N61_02045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5N61_02050 PF01494 FAD binding domain J5N61_02055 PF03109 ABC1 family J5N61_02065 PF01209 ubiE/COQ5 methyltransferase family J5N61_02075 PF03976 Polyphosphate kinase 2 (PPK2) J5N61_02085 PF17946 RecC C-terminal domain J5N61_02090 PF12705 PD-(D/E)XK nuclease superfamily J5N61_02090 PF00580 UvrD/REP helicase N-terminal domain J5N61_02090 PF13361 UvrD-like helicase C-terminal domain J5N61_02095 PF13538 UvrD-like helicase C-terminal domain J5N61_02100 PF00144 Beta-lactamase J5N61_02105 PF00312 Ribosomal protein S15 J5N61_02110 PF01138 3' exoribonuclease family, domain 1 J5N61_02110 PF03725 3' exoribonuclease family, domain 2 J5N61_02110 PF00575 S1 RNA binding domain J5N61_02110 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J5N61_02110 PF00013 KH domain J5N61_02115 PF01544 CorA-like Mg2+ transporter protein J5N61_02125 PF01556 DnaJ C terminal domain J5N61_02125 PF00226 DnaJ domain J5N61_02130 PF01430 Hsp33 protein J5N61_02135 PF00999 Sodium/hydrogen exchanger family J5N61_02135 PF02254 TrkA-N domain J5N61_02140 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J5N61_02140 PF18074 Primosomal protein N C-terminal domain J5N61_02140 PF00271 Helicase conserved C-terminal domain J5N61_02140 PF00270 DEAD/DEAH box helicase J5N61_02140 PF17764 3′ DNA-binding domain (3′BD) J5N61_02145 PF00482 Type II secretion system (T2SS), protein F J5N61_02150 PF07963 Prokaryotic N-terminal methylation motif J5N61_02150 PF08334 Type II secretion system (T2SS), protein G J5N61_02160 PF00795 Carbon-nitrogen hydrolase J5N61_02165 PF00571 CBS domain J5N61_02165 PF03471 Transporter associated domain J5N61_02170 PF01206 Sulfurtransferase TusA J5N61_02175 PF01810 LysE type translocator J5N61_02190 PF05114 Protein of unknown function (DUF692) J5N61_02200 PF04542 Sigma-70 region 2 J5N61_02200 PF08281 Sigma-70, region 4 J5N61_02220 PF01177 Asp/Glu/Hydantoin racemase J5N61_02230 PF00762 Ferrochelatase J5N61_02235 PF00753 Metallo-beta-lactamase superfamily J5N61_02240 PF03884 DNA gyrase inhibitor YacG J5N61_02250 PF13247 4Fe-4S dicluster domain J5N61_02250 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J5N61_02250 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_02255 PF00375 Sodium:dicarboxylate symporter family J5N61_02265 PF01613 Flavin reductase like domain J5N61_02270 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_02285 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J5N61_02295 PF01197 Ribosomal protein L31 J5N61_02300 PF03109 ABC1 family J5N61_02305 PF01554 MatE J5N61_02315 PF06969 HemN C-terminal domain J5N61_02315 PF04055 Radical SAM superfamily J5N61_02335 PF13193 AMP-binding enzyme C-terminal domain J5N61_02335 PF00501 AMP-binding enzyme J5N61_02340 PF00575 S1 RNA binding domain J5N61_02340 PF10150 Ribonuclease E/G family J5N61_02340 PF12111 Polyribonucleotide phosphorylase C terminal J5N61_02345 PF01479 S4 domain J5N61_02345 PF00849 RNA pseudouridylate synthase J5N61_02365 PF03466 LysR substrate binding domain J5N61_02365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_02370 PF12706 Beta-lactamase superfamily domain J5N61_02375 PF06628 Catalase-related immune-responsive J5N61_02375 PF00199 Catalase J5N61_02380 PF01590 GAF domain J5N61_02380 PF00391 PEP-utilising enzyme, mobile domain J5N61_02380 PF02896 PEP-utilising enzyme, TIM barrel domain J5N61_02380 PF05524 PEP-utilising enzyme, N-terminal J5N61_02385 PF00293 NUDIX domain J5N61_02410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_02410 PF03466 LysR substrate binding domain J5N61_02420 PF00330 Aconitase family (aconitate hydratase) J5N61_02425 PF00694 Aconitase C-terminal domain J5N61_02435 PF00180 Isocitrate/isopropylmalate dehydrogenase J5N61_02450 PF01176 Translation initiation factor 1A / IF-1 J5N61_02460 PF01416 tRNA pseudouridine synthase J5N61_02480 PF01118 Semialdehyde dehydrogenase, NAD binding domain J5N61_02480 PF02774 Semialdehyde dehydrogenase, dimerisation domain J5N61_02490 PF03279 Bacterial lipid A biosynthesis acyltransferase J5N61_02500 PF00005 ABC transporter J5N61_02500 PF16326 ABC transporter C-terminal domain J5N61_02500 PF12848 ABC transporter J5N61_02505 PF04102 SlyX J5N61_02520 PF01131 DNA topoisomerase J5N61_02520 PF08272 Topoisomerase I zinc-ribbon-like J5N61_02520 PF01396 Topoisomerase DNA binding C4 zinc finger J5N61_02520 PF01751 Toprim domain J5N61_02535 PF00580 UvrD/REP helicase N-terminal domain J5N61_02535 PF13361 UvrD-like helicase C-terminal domain J5N61_02540 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) J5N61_02560 PF02254 TrkA-N domain J5N61_02560 PF00999 Sodium/hydrogen exchanger family J5N61_02565 PF00471 Ribosomal protein L33 J5N61_02570 PF00830 Ribosomal L28 family J5N61_02575 PF00171 Aldehyde dehydrogenase family J5N61_02580 PF00440 Bacterial regulatory proteins, tetR family J5N61_02580 PF08360 QacR-like protein, C-terminal region J5N61_02585 PF01842 ACT domain J5N61_02585 PF00551 Formyl transferase J5N61_02595 PF01618 MotA/TolQ/ExbB proton channel family J5N61_02605 PF01625 Peptide methionine sulfoxide reductase J5N61_02620 PF00186 Dihydrofolate reductase J5N61_02625 PF00303 Thymidylate synthase J5N61_02650 PF07715 TonB-dependent Receptor Plug Domain J5N61_02650 PF00593 TonB dependent receptor J5N61_02660 PF02130 Uncharacterized protein family UPF0054 J5N61_02665 PF02562 PhoH-like protein J5N61_02670 PF04055 Radical SAM superfamily J5N61_02670 PF00919 Uncharacterized protein family UPF0004 J5N61_02670 PF01938 TRAM domain J5N61_02675 PF10145 Phage-related minor tail protein J5N61_02675 PF01464 Transglycosylase SLT domain J5N61_02675 PF01551 Peptidase family M23 J5N61_02685 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J5N61_02685 PF00056 lactate/malate dehydrogenase, NAD binding domain J5N61_02705 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J5N61_02710 PF01066 CDP-alcohol phosphatidyltransferase J5N61_02745 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_02755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_02755 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_02755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_02760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_02760 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_02760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_02765 PF13302 Acetyltransferase (GNAT) domain J5N61_02770 PF17932 Tetracyclin repressor-like, C-terminal domain J5N61_02770 PF00440 Bacterial regulatory proteins, tetR family J5N61_02785 PF01039 Carboxyl transferase domain J5N61_02790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_02790 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_02790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_02800 PF00289 Biotin carboxylase, N-terminal domain J5N61_02800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5N61_02800 PF02785 Biotin carboxylase C-terminal domain J5N61_02800 PF00364 Biotin-requiring enzyme J5N61_02815 PF03372 Endonuclease/Exonuclease/phosphatase family J5N61_02845 PF04386 Stringent starvation protein B J5N61_02850 PF00043 Glutathione S-transferase, C-terminal domain J5N61_02850 PF02798 Glutathione S-transferase, N-terminal domain J5N61_02855 PF00380 Ribosomal protein S9/S16 J5N61_02860 PF00572 Ribosomal protein L13 J5N61_02870 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J5N61_02875 PF00398 Ribosomal RNA adenine dimethylase J5N61_02880 PF00149 Calcineurin-like phosphoesterase J5N61_02885 PF13439 Glycosyltransferase Family 4 J5N61_02885 PF00534 Glycosyl transferases group 1 J5N61_02890 PF01569 PAP2 superfamily J5N61_02895 PF04384 Iron-sulphur cluster assembly J5N61_02900 PF00334 Nucleoside diphosphate kinase J5N61_02905 PF04055 Radical SAM superfamily J5N61_02920 PF04551 GcpE protein J5N61_02925 PF03129 Anticodon binding domain J5N61_02925 PF13393 Histidyl-tRNA synthetase J5N61_02935 PF13360 PQQ-like domain J5N61_02940 PF01926 50S ribosome-binding GTPase J5N61_02940 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J5N61_02950 PF02355 Protein export membrane protein J5N61_02950 PF07549 SecD/SecF GG Motif J5N61_02955 PF02355 Protein export membrane protein J5N61_02955 PF13721 SecD export protein N-terminal TM region J5N61_02955 PF07549 SecD/SecF GG Motif J5N61_02960 PF02699 Preprotein translocase subunit J5N61_02965 PF01702 Queuine tRNA-ribosyltransferase J5N61_02980 PF02547 Queuosine biosynthesis protein J5N61_02990 PF00072 Response regulator receiver domain J5N61_02990 PF09456 RcsC Alpha-Beta-Loop (ABL) J5N61_02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_02990 PF00512 His Kinase A (phospho-acceptor) domain J5N61_02995 PF08335 GlnD PII-uridylyltransferase J5N61_02995 PF03710 Glutamate-ammonia ligase adenylyltransferase J5N61_03000 PF01063 Amino-transferase class IV J5N61_03005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J5N61_03005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J5N61_03005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J5N61_03015 PF11380 Stealth protein CR2, conserved region 2 J5N61_03015 PF17102 Stealth protein CR3, conserved region 3 J5N61_03015 PF17103 Stealth protein CR4, conserved region 4 J5N61_03015 PF17101 Stealth protein CR1, conserved region 1 J5N61_03030 PF01757 Acyltransferase family J5N61_03045 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) J5N61_03060 PF02938 GAD domain J5N61_03060 PF00152 tRNA synthetases class II (D, K and N) J5N61_03060 PF01336 OB-fold nucleic acid binding domain J5N61_03070 PF00593 TonB dependent receptor J5N61_03070 PF07715 TonB-dependent Receptor Plug Domain J5N61_03100 PF06146 Phosphate-starvation-inducible E J5N61_03105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_03105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_03105 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_03105 PF12806 Acetyl-CoA dehydrogenase C-terminal like J5N61_03110 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_03110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_03110 PF12806 Acetyl-CoA dehydrogenase C-terminal like J5N61_03110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_03120 PF00512 His Kinase A (phospho-acceptor) domain J5N61_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_03120 PF00672 HAMP domain J5N61_03125 PF00486 Transcriptional regulatory protein, C terminal J5N61_03125 PF00072 Response regulator receiver domain J5N61_03140 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J5N61_03160 PF01923 Cobalamin adenosyltransferase J5N61_03165 PF07715 TonB-dependent Receptor Plug Domain J5N61_03165 PF00593 TonB dependent receptor J5N61_03170 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J5N61_03175 PF00291 Pyridoxal-phosphate dependent enzyme J5N61_03185 PF00149 Calcineurin-like phosphoesterase J5N61_03210 PF00290 Tryptophan synthase alpha chain J5N61_03215 PF01039 Carboxyl transferase domain J5N61_03220 PF02875 Mur ligase family, glutamate ligase domain J5N61_03220 PF08245 Mur ligase middle domain J5N61_03240 PF00753 Metallo-beta-lactamase superfamily J5N61_03245 PF10417 C-terminal domain of 1-Cys peroxiredoxin J5N61_03245 PF00578 AhpC/TSA family J5N61_03250 PF01043 SecA preprotein cross-linking domain J5N61_03250 PF07516 SecA Wing and Scaffold domain J5N61_03250 PF07517 SecA DEAD-like domain J5N61_03250 PF02810 SEC-C motif J5N61_03265 PF00083 Sugar (and other) transporter J5N61_03265 PF07690 Major Facilitator Superfamily J5N61_03270 PF03006 Haemolysin-III related J5N61_03300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J5N61_03300 PF00378 Enoyl-CoA hydratase/isomerase J5N61_03300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J5N61_03305 PF02803 Thiolase, C-terminal domain J5N61_03305 PF00108 Thiolase, N-terminal domain J5N61_03320 PF12833 Helix-turn-helix domain J5N61_03320 PF02311 AraC-like ligand binding domain J5N61_03325 PF02515 CoA-transferase family III J5N61_03330 PF04966 Carbohydrate-selective porin, OprB family J5N61_03335 PF01011 PQQ enzyme repeat J5N61_03340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J5N61_03340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J5N61_03350 PF00893 Small Multidrug Resistance protein J5N61_03360 PF00108 Thiolase, N-terminal domain J5N61_03360 PF02803 Thiolase, C-terminal domain J5N61_03370 PF00691 OmpA family J5N61_03370 PF13505 Outer membrane protein beta-barrel domain J5N61_03380 PF01139 tRNA-splicing ligase RtcB J5N61_03385 PF00324 Amino acid permease J5N61_03390 PF08468 Methyltransferase small domain N-terminal J5N61_03390 PF05175 Methyltransferase small domain J5N61_03395 PF00860 Permease family J5N61_03400 PF00009 Elongation factor Tu GTP binding domain J5N61_03400 PF03144 Elongation factor Tu domain 2 J5N61_03400 PF00679 Elongation factor G C-terminus J5N61_03405 PF01741 Large-conductance mechanosensitive channel, MscL J5N61_03420 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J5N61_03420 PF06827 Zinc finger found in FPG and IleRS J5N61_03420 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J5N61_03425 PF07715 TonB-dependent Receptor Plug Domain J5N61_03425 PF00593 TonB dependent receptor J5N61_03435 PF01571 Aminomethyltransferase folate-binding domain J5N61_03445 PF04343 Protein of unknown function, DUF488 J5N61_03450 PF03831 PhnA domain J5N61_03450 PF08274 PhnA Zinc-Ribbon J5N61_03455 PF07411 Domain of unknown function (DUF1508) J5N61_03460 PF03129 Anticodon binding domain J5N61_03460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J5N61_03460 PF04073 Aminoacyl-tRNA editing domain J5N61_03470 PF00072 Response regulator receiver domain J5N61_03475 PF00072 Response regulator receiver domain J5N61_03480 PF01584 CheW-like domain J5N61_03485 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J5N61_03485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5N61_03490 PF07194 P2 response regulator binding domain J5N61_03490 PF01627 Hpt domain J5N61_03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_03490 PF01584 CheW-like domain J5N61_03490 PF07194 P2 response regulator binding domain J5N61_03490 PF02895 Signal transducing histidine kinase, homodimeric domain J5N61_03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_03490 PF01627 Hpt domain J5N61_03490 PF01584 CheW-like domain J5N61_03490 PF02895 Signal transducing histidine kinase, homodimeric domain J5N61_03500 PF07687 Peptidase dimerisation domain J5N61_03500 PF01546 Peptidase family M20/M25/M40 J5N61_03505 PF08085 Entericidin EcnA/B family J5N61_03520 PF04304 Protein of unknown function (DUF454) J5N61_03525 PF03734 L,D-transpeptidase catalytic domain J5N61_03525 PF17969 L,D-transpeptidase C-terminal domain J5N61_03570 PF00258 Flavodoxin J5N61_03570 PF00175 Oxidoreductase NAD-binding domain J5N61_03570 PF00667 FAD binding domain J5N61_03580 PF12805 FUSC-like inner membrane protein yccS J5N61_03585 PF07690 Major Facilitator Superfamily J5N61_03590 PF00881 Nitroreductase family J5N61_03600 PF03616 Sodium/glutamate symporter J5N61_03605 PF01235 Sodium:alanine symporter family J5N61_03610 PF01734 Patatin-like phospholipase J5N61_03615 PF05992 SbmA/BacA-like family J5N61_03630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_03630 PF03466 LysR substrate binding domain J5N61_03660 PF02637 GatB domain J5N61_03660 PF02934 GatB/GatE catalytic domain J5N61_03665 PF01425 Amidase J5N61_03670 PF02686 Glu-tRNAGln amidotransferase C subunit J5N61_03680 PF04085 rod shape-determining protein MreC J5N61_03690 PF02545 Maf-like protein J5N61_03695 PF10150 Ribonuclease E/G family J5N61_03695 PF00575 S1 RNA binding domain J5N61_03700 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain J5N61_03700 PF06974 Protein of unknown function (DUF1298) J5N61_03705 PF01507 Phosphoadenosine phosphosulfate reductase family J5N61_03720 PF03814 Potassium-transporting ATPase A subunit J5N61_03730 PF02669 K+-transporting ATPase, c chain J5N61_03735 PF13493 Domain of unknown function (DUF4118) J5N61_03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_03735 PF00512 His Kinase A (phospho-acceptor) domain J5N61_03735 PF02702 Osmosensitive K+ channel His kinase sensor domain J5N61_03740 PF00072 Response regulator receiver domain J5N61_03740 PF00486 Transcriptional regulatory protein, C terminal J5N61_03745 PF00171 Aldehyde dehydrogenase family J5N61_03750 PF03600 Citrate transporter J5N61_03760 PF01569 PAP2 superfamily J5N61_03765 PF00120 Glutamine synthetase, catalytic domain J5N61_03785 PF00324 Amino acid permease J5N61_03790 PF04303 PrpF protein J5N61_03795 PF00348 Polyprenyl synthetase J5N61_03800 PF12823 Domain of unknown function (DUF3817) J5N61_03805 PF01145 SPFH domain / Band 7 family J5N61_03815 PF01734 Patatin-like phospholipase J5N61_03835 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_03840 PF08019 Phosphoethanolamine transferase EptA/EptB J5N61_03840 PF00884 Sulfatase J5N61_03845 PF00072 Response regulator receiver domain J5N61_03845 PF00486 Transcriptional regulatory protein, C terminal J5N61_03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_03850 PF00512 His Kinase A (phospho-acceptor) domain J5N61_03850 PF08521 Two-component sensor kinase N-terminal J5N61_03865 PF00909 Ammonium Transporter Family J5N61_03870 PF00990 Diguanylate cyclase, GGDEF domain J5N61_03870 PF00072 Response regulator receiver domain J5N61_03880 PF04480 Protein of unknown function (DUF559) J5N61_03895 PF00133 tRNA synthetases class I (I, L, M and V) J5N61_03895 PF10458 Valyl tRNA synthetase tRNA binding arm J5N61_03895 PF08264 Anticodon-binding domain of tRNA J5N61_03915 PF01906 Putative heavy-metal-binding J5N61_03920 PF01906 Putative heavy-metal-binding J5N61_03925 PF02321 Outer membrane efflux protein J5N61_03930 PF00873 AcrB/AcrD/AcrF family J5N61_03935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5N61_03935 PF00529 HlyD membrane-fusion protein of T1SS J5N61_03940 PF01569 PAP2 superfamily J5N61_03950 PF00348 Polyprenyl synthetase J5N61_03955 PF00829 Ribosomal prokaryotic L21 protein J5N61_03960 PF01016 Ribosomal L27 protein J5N61_03965 PF02678 Pirin J5N61_03965 PF05726 Pirin C-terminal cupin domain J5N61_03970 PF03548 Outer membrane lipoprotein carrier protein LolA J5N61_03980 PF02403 Seryl-tRNA synthetase N-terminal domain J5N61_03980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J5N61_03985 PF10414 Sirohaem synthase dimerisation region J5N61_03985 PF14824 Sirohaem biosynthesis protein central J5N61_03985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5N61_03990 PF00588 SpoU rRNA Methylase family J5N61_03995 PF01638 HxlR-like helix-turn-helix J5N61_04000 PF03358 NADPH-dependent FMN reductase J5N61_04005 PF13520 Amino acid permease J5N61_04010 PF00465 Iron-containing alcohol dehydrogenase J5N61_04020 PF03099 Biotin/lipoate A/B protein ligase family J5N61_04030 PF04359 Protein of unknown function (DUF493) J5N61_04035 PF04545 Sigma-70, region 4 J5N61_04035 PF04546 Sigma-70, non-essential region J5N61_04035 PF03979 Sigma-70 factor, region 1.1 J5N61_04035 PF00140 Sigma-70 factor, region 1.2 J5N61_04035 PF04542 Sigma-70 region 2 J5N61_04035 PF04539 Sigma-70 region 3 J5N61_04055 PF05724 Thiopurine S-methyltransferase (TPMT) J5N61_04060 PF09335 SNARE associated Golgi protein J5N61_04065 PF00581 Rhodanese-like domain J5N61_04065 PF17773 UPF0176 acylphosphatase like domain J5N61_04085 PF00285 Citrate synthase, C-terminal domain J5N61_04090 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J5N61_04095 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J5N61_04100 PF00890 FAD binding domain J5N61_04100 PF02910 Fumarate reductase flavoprotein C-term J5N61_04105 PF13085 2Fe-2S iron-sulfur cluster binding domain J5N61_04110 PF16078 2-oxoglutarate dehydrogenase N-terminus J5N61_04110 PF00676 Dehydrogenase E1 component J5N61_04110 PF16870 2-oxoglutarate dehydrogenase C-terminal J5N61_04110 PF02779 Transketolase, pyrimidine binding domain J5N61_04115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J5N61_04115 PF00364 Biotin-requiring enzyme J5N61_04115 PF02817 e3 binding domain J5N61_04120 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_04120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5N61_04125 PF08442 ATP-grasp domain J5N61_04125 PF00549 CoA-ligase J5N61_04130 PF00549 CoA-ligase J5N61_04130 PF02629 CoA binding domain J5N61_04140 PF14883 Hypothetical glycosyl hydrolase family 13 J5N61_04140 PF01522 Polysaccharide deacetylase J5N61_04145 PF00535 Glycosyl transferase family 2 J5N61_04155 PF01145 SPFH domain / Band 7 family J5N61_04155 PF15975 Flotillin J5N61_04160 PF07290 Protein of unknown function (DUF1449) J5N61_04165 PF00579 tRNA synthetases class I (W and Y) J5N61_04170 PF05661 Protein of unknown function (DUF808) J5N61_04175 PF04228 Putative neutral zinc metallopeptidase J5N61_04180 PF00999 Sodium/hydrogen exchanger family J5N61_04190 PF13737 Transposase DDE domain J5N61_04195 PF00582 Universal stress protein family J5N61_04200 PF00132 Bacterial transferase hexapeptide (six repeats) J5N61_04205 PF01272 Transcription elongation factor, GreA/GreB, C-term J5N61_04205 PF03449 Transcription elongation factor, N-terminal J5N61_04210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5N61_04210 PF02142 MGS-like domain J5N61_04210 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J5N61_04215 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J5N61_04215 PF00117 Glutamine amidotransferase class-I J5N61_04230 PF01985 CRS1 / YhbY (CRM) domain J5N61_04235 PF01728 FtsJ-like methyltransferase J5N61_04240 PF00004 ATPase family associated with various cellular activities (AAA) J5N61_04240 PF17862 AAA+ lid domain J5N61_04240 PF06480 FtsH Extracellular J5N61_04240 PF01434 Peptidase family M41 J5N61_04245 PF00809 Pterin binding enzyme J5N61_04250 PF12450 von Willebrand factor J5N61_04250 PF00092 von Willebrand factor type A domain J5N61_04250 PF12034 Domain of unknown function (DUF3520) J5N61_04270 PF04973 Nicotinamide mononucleotide transporter J5N61_04275 PF03009 Glycerophosphoryl diester phosphodiesterase family J5N61_04280 PF00884 Sulfatase J5N61_04285 PF00873 AcrB/AcrD/AcrF family J5N61_04290 PF00571 CBS domain J5N61_04290 PF01769 Divalent cation transporter J5N61_04290 PF03448 MgtE intracellular N domain J5N61_04300 PF01435 Peptidase family M48 J5N61_04305 PF01464 Transglycosylase SLT domain J5N61_04310 PF01171 PP-loop family J5N61_04320 PF01464 Transglycosylase SLT domain J5N61_04320 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5N61_04325 PF01272 Transcription elongation factor, GreA/GreB, C-term J5N61_04325 PF03449 Transcription elongation factor, N-terminal J5N61_04335 PF14659 Phage integrase, N-terminal SAM-like domain J5N61_04335 PF00589 Phage integrase family J5N61_04380 PF02311 AraC-like ligand binding domain J5N61_04380 PF12833 Helix-turn-helix domain J5N61_04390 PF00462 Glutaredoxin J5N61_04395 PF01641 SelR domain J5N61_04400 PF01625 Peptide methionine sulfoxide reductase J5N61_04405 PF00990 Diguanylate cyclase, GGDEF domain J5N61_04430 PF01695 IstB-like ATP binding protein J5N61_04435 PF01381 Helix-turn-helix J5N61_04450 PF12161 HsdM N-terminal domain J5N61_04450 PF02384 N-6 DNA Methylase J5N61_04475 PF18766 SWI2/SNF2 ATPase J5N61_04475 PF11867 Domain of unknown function (DUF3387) J5N61_04475 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J5N61_04530 PF00375 Sodium:dicarboxylate symporter family J5N61_04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_04535 PF03466 LysR substrate binding domain J5N61_04540 PF10415 Fumarase C C-terminus J5N61_04540 PF00206 Lyase J5N61_04550 PF03061 Thioesterase superfamily J5N61_04560 PF02492 CobW/HypB/UreG, nucleotide-binding domain J5N61_04560 PF07683 Cobalamin synthesis protein cobW C-terminal domain J5N61_04565 PF07152 YaeQ protein J5N61_04570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J5N61_04580 PF01522 Polysaccharide deacetylase J5N61_04580 PF14883 Hypothetical glycosyl hydrolase family 13 J5N61_04585 PF00535 Glycosyl transferase family 2 J5N61_04600 PF16655 PhoD-like phosphatase, N-terminal domain J5N61_04600 PF09423 PhoD-like phosphatase J5N61_04615 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J5N61_04615 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J5N61_04625 PF14542 GCN5-related N-acetyl-transferase J5N61_04635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J5N61_04635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J5N61_04640 PF08220 DeoR-like helix-turn-helix domain J5N61_04640 PF00455 DeoR C terminal sensor domain J5N61_04645 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J5N61_04645 PF01266 FAD dependent oxidoreductase J5N61_04650 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain J5N61_04650 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain J5N61_04655 PF00781 Diacylglycerol kinase catalytic domain J5N61_04665 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_04670 PF00166 Chaperonin 10 Kd subunit J5N61_04675 PF00118 TCP-1/cpn60 chaperonin family J5N61_04690 PF03389 MobA/MobL family J5N61_04725 PF00872 Transposase, Mutator family J5N61_04735 PF00857 Isochorismatase family J5N61_04750 PF11799 impB/mucB/samB family C-terminal domain J5N61_04750 PF13438 Domain of unknown function (DUF4113) J5N61_04750 PF00817 impB/mucB/samB family J5N61_04755 PF01726 LexA DNA binding domain J5N61_04755 PF00717 Peptidase S24-like J5N61_04770 PF00199 Catalase J5N61_04770 PF18011 C-terminal domain found in long catalases J5N61_04770 PF06628 Catalase-related immune-responsive J5N61_04775 PF04239 Protein of unknown function (DUF421) J5N61_04825 PF00982 Glycosyltransferase family 20 J5N61_04830 PF02358 Trehalose-phosphatase J5N61_04845 PF02601 Exonuclease VII, large subunit J5N61_04845 PF13742 OB-fold nucleic acid binding domain J5N61_04885 PF13356 Arm DNA-binding domain J5N61_04885 PF00589 Phage integrase family J5N61_04895 PF01219 Prokaryotic diacylglycerol kinase J5N61_04905 PF11890 Domain of unknown function (DUF3410) J5N61_04905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5N61_04905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5N61_04910 PF00152 tRNA synthetases class II (D, K and N) J5N61_04930 PF01521 Iron-sulphur cluster biosynthesis J5N61_04930 PF01106 NifU-like domain J5N61_04935 PF07715 TonB-dependent Receptor Plug Domain J5N61_04935 PF00593 TonB dependent receptor J5N61_04945 PF00561 alpha/beta hydrolase fold J5N61_04950 PF00484 Carbonic anhydrase J5N61_04955 PF13472 GDSL-like Lipase/Acylhydrolase family J5N61_04960 PF00005 ABC transporter J5N61_04970 PF01694 Rhomboid family J5N61_04975 PF00912 Transglycosylase J5N61_04980 PF02503 Polyphosphate kinase middle domain J5N61_04980 PF13090 Polyphosphate kinase C-terminal domain 2 J5N61_04980 PF17941 Polyphosphate kinase C-terminal domain 1 J5N61_04980 PF13089 Polyphosphate kinase N-terminal domain J5N61_04985 PF03060 Nitronate monooxygenase J5N61_04990 PF02322 Cytochrome bd terminal oxidase subunit II J5N61_04995 PF01654 Cytochrome bd terminal oxidase subunit I J5N61_05010 PF00875 DNA photolyase J5N61_05010 PF03441 FAD binding domain of DNA photolyase J5N61_05015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J5N61_05020 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_05025 PF07943 Penicillin-binding protein 5, C-terminal domain J5N61_05025 PF00768 D-alanyl-D-alanine carboxypeptidase J5N61_05035 PF03971 Monomeric isocitrate dehydrogenase J5N61_05050 PF00849 RNA pseudouridylate synthase J5N61_05055 PF00180 Isocitrate/isopropylmalate dehydrogenase J5N61_05060 PF02567 Phenazine biosynthesis-like protein J5N61_05065 PF00675 Insulinase (Peptidase family M16) J5N61_05065 PF05193 Peptidase M16 inactive domain J5N61_05070 PF01699 Sodium/calcium exchanger protein J5N61_05095 PF02581 Thiamine monophosphate synthase J5N61_05100 PF00202 Aminotransferase class-III J5N61_05105 PF00849 RNA pseudouridylate synthase J5N61_05110 PF00271 Helicase conserved C-terminal domain J5N61_05110 PF00176 SNF2 family N-terminal domain J5N61_05110 PF18339 RapA N-terminal Tudor like domain 1 J5N61_05110 PF18337 RapA N-terminal Tudor like domain J5N61_05110 PF12137 RNA polymerase recycling family C-terminal J5N61_05115 PF00210 Ferritin-like domain J5N61_05125 PF00440 Bacterial regulatory proteins, tetR family J5N61_05130 PF00970 Oxidoreductase FAD-binding domain J5N61_05130 PF00111 2Fe-2S iron-sulfur cluster binding domain J5N61_05130 PF00175 Oxidoreductase NAD-binding domain J5N61_05135 PF00487 Fatty acid desaturase J5N61_05145 PF00440 Bacterial regulatory proteins, tetR family J5N61_05155 PF00202 Aminotransferase class-III J5N61_05160 PF00282 Pyridoxal-dependent decarboxylase conserved domain J5N61_05165 PF00355 Rieske [2Fe-2S] domain J5N61_05175 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_05180 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_05185 PF00005 ABC transporter J5N61_05190 PF01343 Peptidase family S49 J5N61_05190 PF08496 Peptidase family S49 N-terminal J5N61_05220 PF03717 Penicillin-binding Protein dimerisation domain J5N61_05220 PF00905 Penicillin binding protein transpeptidase domain J5N61_05235 PF05191 Adenylate kinase, active site lid J5N61_05245 PF10576 Iron-sulfur binding domain of endonuclease III J5N61_05245 PF00633 Helix-hairpin-helix motif J5N61_05245 PF00730 HhH-GPD superfamily base excision DNA repair protein J5N61_05250 PF04060 Putative Fe-S cluster J5N61_05255 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J5N61_05255 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J5N61_05265 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase J5N61_05270 PF02590 Predicted SPOUT methyltransferase J5N61_05275 PF00004 ATPase family associated with various cellular activities (AAA) J5N61_05275 PF05362 Lon protease (S16) C-terminal proteolytic domain J5N61_05275 PF02190 ATP-dependent protease La (LON) substrate-binding domain J5N61_05280 PF01812 5-formyltetrahydrofolate cyclo-ligase family J5N61_05345 PF13018 Extended Signal Peptide of Type V secretion system J5N61_05345 PF03895 YadA-like membrane anchor domain J5N61_05345 PF05658 Head domain of trimeric autotransporter adhesin J5N61_05345 PF05662 Coiled stalk of trimeric autotransporter adhesin J5N61_05350 PF00691 OmpA family J5N61_05350 PF04355 SmpA / OmlA family J5N61_05360 PF13569 Domain of unknown function (DUF4132) J5N61_05365 PF07728 AAA domain (dynein-related subfamily) J5N61_05375 PF05762 VWA domain containing CoxE-like protein J5N61_05410 PF05195 Aminopeptidase P, N-terminal domain J5N61_05410 PF00557 Metallopeptidase family M24 J5N61_05415 PF01494 FAD binding domain J5N61_05420 PF01494 FAD binding domain J5N61_05430 PF13411 MerR HTH family regulatory protein J5N61_05445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5N61_05455 PF02021 Uncharacterised protein family UPF0102 J5N61_05460 PF04972 BON domain J5N61_05470 PF00293 NUDIX domain J5N61_05470 PF09297 NADH pyrophosphatase zinc ribbon domain J5N61_05480 PF00929 Exonuclease J5N61_05485 PF01464 Transglycosylase SLT domain J5N61_05485 PF01476 LysM domain J5N61_05490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5N61_05495 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_05500 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_05500 PF12911 N-terminal TM domain of oligopeptide transport permease C J5N61_05505 PF00005 ABC transporter J5N61_05505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5N61_05510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J5N61_05510 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_05525 PF00929 Exonuclease J5N61_05530 PF01979 Amidohydrolase family J5N61_05535 PF01590 GAF domain J5N61_05535 PF00990 Diguanylate cyclase, GGDEF domain J5N61_05535 PF00360 Phytochrome region J5N61_05535 PF00563 EAL domain J5N61_05545 PF01208 Uroporphyrinogen decarboxylase (URO-D) J5N61_05550 PF05675 Protein of unknown function (DUF817) J5N61_05570 PF01227 GTP cyclohydrolase I J5N61_05580 PF00218 Indole-3-glycerol phosphate synthase J5N61_05585 PF02885 Glycosyl transferase family, helical bundle domain J5N61_05585 PF00591 Glycosyl transferase family, a/b domain J5N61_05590 PF00111 2Fe-2S iron-sulfur cluster binding domain J5N61_05590 PF03473 MOSC domain J5N61_05590 PF03476 MOSC N-terminal beta barrel domain J5N61_05595 PF00375 Sodium:dicarboxylate symporter family J5N61_05600 PF00117 Glutamine amidotransferase class-I J5N61_05605 PF03951 Glutamine synthetase, beta-Grasp domain J5N61_05605 PF00120 Glutamine synthetase, catalytic domain J5N61_05610 PF04345 Chorismate lyase J5N61_05615 PF01040 UbiA prenyltransferase family J5N61_05655 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J5N61_05655 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J5N61_05660 PF01784 NIF3 (NGG1p interacting factor 3) J5N61_05665 PF13180 PDZ domain J5N61_05665 PF17820 PDZ domain J5N61_05675 PF07690 Major Facilitator Superfamily J5N61_05685 PF00557 Metallopeptidase family M24 J5N61_05690 PF00318 Ribosomal protein S2 J5N61_05695 PF00889 Elongation factor TS J5N61_05700 PF01743 Poly A polymerase head domain J5N61_05700 PF12627 Probable RNA and SrmB- binding site of polymerase A J5N61_05705 PF00390 Malic enzyme, N-terminal domain J5N61_05705 PF03949 Malic enzyme, NAD binding domain J5N61_05705 PF01515 Phosphate acetyl/butaryl transferase J5N61_05710 PF00990 Diguanylate cyclase, GGDEF domain J5N61_05710 PF03707 Bacterial signalling protein N terminal repeat J5N61_05710 PF00563 EAL domain J5N61_05715 PF04452 RNA methyltransferase J5N61_05720 PF02219 Methylenetetrahydrofolate reductase J5N61_05725 PF05221 S-adenosyl-L-homocysteine hydrolase J5N61_05725 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J5N61_05735 PF16123 Hydroxyacylglutathione hydrolase C-terminus J5N61_05735 PF00753 Metallo-beta-lactamase superfamily J5N61_05750 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_05755 PF09383 NIL domain J5N61_05755 PF00005 ABC transporter J5N61_05760 PF03180 NLPA lipoprotein J5N61_05765 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J5N61_05765 PF02843 Phosphoribosylglycinamide synthetase, C domain J5N61_05765 PF02844 Phosphoribosylglycinamide synthetase, N domain J5N61_05770 PF01808 AICARFT/IMPCHase bienzyme J5N61_05770 PF02142 MGS-like domain J5N61_05775 PF02954 Bacterial regulatory protein, Fis family J5N61_05795 PF01134 Glucose inhibited division protein A J5N61_05795 PF13932 GidA associated domain J5N61_05800 PF00893 Small Multidrug Resistance protein J5N61_05825 PF07715 TonB-dependent Receptor Plug Domain J5N61_05825 PF00593 TonB dependent receptor J5N61_05830 PF00860 Permease family J5N61_05835 PF00962 Adenosine/AMP deaminase J5N61_05840 PF01292 Prokaryotic cytochrome b561 J5N61_05855 PF01351 Ribonuclease HII J5N61_05860 PF02599 Global regulator protein family J5N61_05865 PF00696 Amino acid kinase family J5N61_05865 PF01842 ACT domain J5N61_05865 PF13840 ACT domain J5N61_05965 PF01695 IstB-like ATP binding protein J5N61_06020 PF06381 Protein of unknown function (DUF1073) J5N61_06080 PF02646 RmuC family J5N61_06160 PF11799 impB/mucB/samB family C-terminal domain J5N61_06160 PF00817 impB/mucB/samB family J5N61_06160 PF13438 Domain of unknown function (DUF4113) J5N61_06165 PF01726 LexA DNA binding domain J5N61_06165 PF00717 Peptidase S24-like J5N61_06180 PF01411 tRNA synthetases class II (A) J5N61_06180 PF02272 DHHA1 domain J5N61_06180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J5N61_06185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J5N61_06185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J5N61_06195 PF13393 Histidyl-tRNA synthetase J5N61_06200 PF00709 Adenylosuccinate synthetase J5N61_06210 PF14403 Circularly permuted ATP-grasp type 2 J5N61_06220 PF08379 Bacterial transglutaminase-like N-terminal region J5N61_06220 PF01841 Transglutaminase-like superfamily J5N61_06230 PF00842 Alanine racemase, C-terminal domain J5N61_06230 PF01168 Alanine racemase, N-terminal domain J5N61_06235 PF03796 DnaB-like helicase C terminal domain J5N61_06235 PF00772 DnaB-like helicase N terminal domain J5N61_06240 PF03948 Ribosomal protein L9, C-terminal domain J5N61_06240 PF01281 Ribosomal protein L9, N-terminal domain J5N61_06245 PF01084 Ribosomal protein S18 J5N61_06250 PF01250 Ribosomal protein S6 J5N61_06280 PF01040 UbiA prenyltransferase family J5N61_06285 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J5N61_06290 PF00510 Cytochrome c oxidase subunit III J5N61_06295 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5N61_06300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J5N61_06300 PF06481 COX Aromatic Rich Motif J5N61_06310 PF00391 PEP-utilising enzyme, mobile domain J5N61_06310 PF02896 PEP-utilising enzyme, TIM barrel domain J5N61_06310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J5N61_06315 PF03618 Kinase/pyrophosphorylase J5N61_06325 PF00296 Luciferase-like monooxygenase J5N61_06335 PF01479 S4 domain J5N61_06335 PF00849 RNA pseudouridylate synthase J5N61_06340 PF00583 Acetyltransferase (GNAT) family J5N61_06350 PF00849 RNA pseudouridylate synthase J5N61_06360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J5N61_06365 PF08676 MutL C terminal dimerisation domain J5N61_06365 PF01119 DNA mismatch repair protein, C-terminal domain J5N61_06375 PF17209 Hfq protein J5N61_06385 PF00881 Nitroreductase family J5N61_06390 PF00149 Calcineurin-like phosphoesterase J5N61_06395 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J5N61_06400 PF00749 tRNA synthetases class I (E and Q), catalytic domain J5N61_06400 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J5N61_06410 PF00117 Glutamine amidotransferase class-I J5N61_06410 PF00958 GMP synthase C terminal domain J5N61_06410 PF02540 NAD synthase J5N61_06420 PF13520 Amino acid permease J5N61_06430 PF14493 Helix-turn-helix domain J5N61_06430 PF05970 PIF1-like helicase J5N61_06440 PF13296 Putative type VI secretion system Rhs element Vgr J5N61_06440 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J5N61_06440 PF04717 Type VI secretion system, phage-baseplate injector J5N61_06460 PF02110 Hydroxyethylthiazole kinase family J5N61_06485 PF11940 Domain of unknown function (DUF3458) Ig-like fold J5N61_06485 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J5N61_06485 PF01433 Peptidase family M1 domain J5N61_06490 PF03313 Serine dehydratase alpha chain J5N61_06490 PF03315 Serine dehydratase beta chain J5N61_06500 PF06271 RDD family J5N61_06520 PF01810 LysE type translocator J5N61_06525 PF00923 Transaldolase/Fructose-6-phosphate aldolase J5N61_06530 PF03466 LysR substrate binding domain J5N61_06530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_06540 PF03461 TRCF domain J5N61_06540 PF00270 DEAD/DEAH box helicase J5N61_06540 PF00271 Helicase conserved C-terminal domain J5N61_06540 PF17757 UvrB interaction domain J5N61_06540 PF02559 CarD-like/TRCF domain J5N61_06550 PF00211 Adenylate and Guanylate cyclase catalytic domain J5N61_06555 PF00111 2Fe-2S iron-sulfur cluster binding domain J5N61_06560 PF00012 Hsp70 protein J5N61_06565 PF00226 DnaJ domain J5N61_06565 PF07743 HSCB C-terminal oligomerisation domain J5N61_06570 PF01521 Iron-sulphur cluster biosynthesis J5N61_06575 PF01592 NifU-like N terminal domain J5N61_06580 PF00266 Aminotransferase class-V J5N61_06585 PF02082 Transcriptional regulator J5N61_06600 PF00216 Bacterial DNA-binding protein J5N61_06620 PF02631 RecX family J5N61_06625 PF00154 recA bacterial DNA recombination protein J5N61_06630 PF01479 S4 domain J5N61_06635 PF13419 Haloacid dehalogenase-like hydrolase J5N61_06640 PF00459 Inositol monophosphatase family J5N61_06655 PF01649 Ribosomal protein S20 J5N61_06660 PF13460 NAD(P)H-binding J5N61_06665 PF03737 Aldolase/RraA J5N61_06680 PF02803 Thiolase, C-terminal domain J5N61_06680 PF00108 Thiolase, N-terminal domain J5N61_06695 PF00144 Beta-lactamase J5N61_06715 PF02545 Maf-like protein J5N61_06725 PF00162 Phosphoglycerate kinase J5N61_06740 PF00881 Nitroreductase family J5N61_06745 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J5N61_06745 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J5N61_06770 PF01180 Dihydroorotate dehydrogenase J5N61_06775 PF02674 Colicin V production protein J5N61_06780 PF00156 Phosphoribosyl transferase domain J5N61_06790 PF02673 Bacitracin resistance protein BacA J5N61_06815 PF05816 Toxic anion resistance protein (TelA) J5N61_06825 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_06825 PF13192 Thioredoxin domain J5N61_06830 PF00561 alpha/beta hydrolase fold J5N61_06830 PF08386 TAP-like protein J5N61_06840 PF00132 Bacterial transferase hexapeptide (six repeats) J5N61_06845 PF00588 SpoU rRNA Methylase family J5N61_06850 PF07733 Bacterial DNA polymerase III alpha NTPase domain J5N61_06850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J5N61_06850 PF14579 Helix-hairpin-helix motif J5N61_06850 PF02811 PHP domain J5N61_06850 PF01336 OB-fold nucleic acid binding domain J5N61_06865 PF00155 Aminotransferase class I and II J5N61_06870 PF01641 SelR domain J5N61_06875 PF00255 Glutathione peroxidase J5N61_06880 PF00873 AcrB/AcrD/AcrF family J5N61_06885 PF13533 Biotin-lipoyl like J5N61_06890 PF01037 Lrp/AsnC ligand binding domain J5N61_06900 PF00155 Aminotransferase class I and II J5N61_06905 PF01966 HD domain J5N61_06905 PF01909 Nucleotidyltransferase domain J5N61_06905 PF08335 GlnD PII-uridylyltransferase J5N61_06910 PF02222 ATP-grasp domain J5N61_06920 PF00027 Cyclic nucleotide-binding domain J5N61_06920 PF13545 Crp-like helix-turn-helix domain J5N61_06935 PF01926 50S ribosome-binding GTPase J5N61_06935 PF06071 Protein of unknown function (DUF933) J5N61_06940 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_06945 PF09383 NIL domain J5N61_06945 PF00005 ABC transporter J5N61_06950 PF03180 NLPA lipoprotein J5N61_06955 PF00296 Luciferase-like monooxygenase J5N61_06965 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J5N61_06965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_06980 PF01709 Transcriptional regulator J5N61_06995 PF00313 'Cold-shock' DNA-binding domain J5N61_07005 PF03279 Bacterial lipid A biosynthesis acyltransferase J5N61_07010 PF00199 Catalase J5N61_07015 PF13613 Helix-turn-helix of DDE superfamily endonuclease J5N61_07015 PF13359 DDE superfamily endonuclease J5N61_07050 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_07090 PF00589 Phage integrase family J5N61_07090 PF14659 Phage integrase, N-terminal SAM-like domain J5N61_07125 PF08241 Methyltransferase domain J5N61_07160 PF08463 EcoEI R protein C-terminal J5N61_07160 PF00271 Helicase conserved C-terminal domain J5N61_07160 PF04851 Type III restriction enzyme, res subunit J5N61_07160 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J5N61_07165 PF02384 N-6 DNA Methylase J5N61_07270 PF10431 C-terminal, D2-small domain, of ClpB protein J5N61_07270 PF00004 ATPase family associated with various cellular activities (AAA) J5N61_07270 PF17871 AAA lid domain J5N61_07270 PF02861 Clp amino terminal domain, pathogenicity island component J5N61_07270 PF07724 AAA domain (Cdc48 subfamily) J5N61_07285 PF13356 Arm DNA-binding domain J5N61_07285 PF00589 Phage integrase family J5N61_07320 PF07728 AAA domain (dynein-related subfamily) J5N61_07320 PF17868 AAA lid domain J5N61_07320 PF12592 Protein of unknown function (DUF3763) J5N61_07330 PF00350 Dynamin family J5N61_07335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J5N61_07335 PF01926 50S ribosome-binding GTPase J5N61_07365 PF13356 Arm DNA-binding domain J5N61_07365 PF00589 Phage integrase family J5N61_07380 PF02661 Fic/DOC family J5N61_07380 PF13784 Fic/DOC family N-terminal J5N61_07385 PF02652 L-lactate permease J5N61_07390 PF07729 FCD domain J5N61_07390 PF00392 Bacterial regulatory proteins, gntR family J5N61_07395 PF01070 FMN-dependent dehydrogenase J5N61_07400 PF09330 D-lactate dehydrogenase, membrane binding J5N61_07400 PF01565 FAD binding domain J5N61_07415 PF04055 Radical SAM superfamily J5N61_07420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5N61_07420 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_07440 PF03330 Lytic transglycolase J5N61_07440 PF05036 Sporulation related domain J5N61_07445 PF13406 Transglycosylase SLT domain J5N61_07450 PF01098 Cell cycle protein J5N61_07460 PF14489 QueF-like protein J5N61_07460 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J5N61_07465 PF01061 ABC-2 type transporter J5N61_07470 PF00005 ABC transporter J5N61_07515 PF00464 Serine hydroxymethyltransferase J5N61_07520 PF00037 4Fe-4S binding domain J5N61_07525 PF01136 Peptidase family U32 J5N61_07525 PF16325 Peptidase family U32 C-terminal domain J5N61_07540 PF05360 yiaA/B two helix domain J5N61_07545 PF03462 PCRF domain J5N61_07545 PF00472 RF-1 domain J5N61_07550 PF13847 Methyltransferase domain J5N61_07550 PF17827 PrmC N-terminal domain J5N61_07555 PF04299 Putative FMN-binding domain J5N61_07565 PF00106 short chain dehydrogenase J5N61_07570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J5N61_07570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J5N61_07575 PF01613 Flavin reductase like domain J5N61_07590 PF00899 ThiF family J5N61_07595 PF03109 ABC1 family J5N61_07600 PF02152 Dihydroneopterin aldolase J5N61_07625 PF03232 Ubiquinone biosynthesis protein COQ7 J5N61_07630 PF07690 Major Facilitator Superfamily J5N61_07635 PF01103 Surface antigen J5N61_07635 PF07244 Surface antigen variable number repeat J5N61_07635 PF17243 POTRA domain TamA domain 1 J5N61_07655 PF00330 Aconitase family (aconitate hydratase) J5N61_07655 PF06434 Aconitate hydratase 2 N-terminus J5N61_07655 PF11791 Aconitate B N-terminal domain J5N61_07680 PF00939 Sodium:sulfate symporter transmembrane region J5N61_07685 PF00027 Cyclic nucleotide-binding domain J5N61_07685 PF00520 Ion transport protein J5N61_07690 PF01810 LysE type translocator J5N61_07695 PF09997 Predicted membrane protein (DUF2238) J5N61_07700 PF07690 Major Facilitator Superfamily J5N61_07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_07705 PF03466 LysR substrate binding domain J5N61_07710 PF04284 Protein of unknown function (DUF441) J5N61_07725 PF00175 Oxidoreductase NAD-binding domain J5N61_07725 PF00970 Oxidoreductase FAD-binding domain J5N61_07730 PF18389 TrmO C-terminal domain J5N61_07730 PF01980 tRNA-methyltransferase O J5N61_07740 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J5N61_07740 PF00437 Type II/IV secretion system protein J5N61_07750 PF00486 Transcriptional regulatory protein, C terminal J5N61_07750 PF00072 Response regulator receiver domain J5N61_07755 PF00512 His Kinase A (phospho-acceptor) domain J5N61_07755 PF08521 Two-component sensor kinase N-terminal J5N61_07755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_07765 PF00293 NUDIX domain J5N61_07775 PF00912 Transglycosylase J5N61_07775 PF14814 Bifunctional transglycosylase second domain J5N61_07775 PF00905 Penicillin binding protein transpeptidase domain J5N61_07780 PF01513 ATP-NAD kinase J5N61_07785 PF07023 Protein of unknown function (DUF1315) J5N61_07790 PF00591 Glycosyl transferase family, a/b domain J5N61_07790 PF02885 Glycosyl transferase family, helical bundle domain J5N61_07795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_07795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_07795 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_07810 PF01817 Chorismate mutase type II J5N61_07810 PF00800 Prephenate dehydratase J5N61_07810 PF01842 ACT domain J5N61_07815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J5N61_07825 PF03781 Sulfatase-modifying factor enzyme 1 J5N61_07830 PF01546 Peptidase family M20/M25/M40 J5N61_07830 PF07687 Peptidase dimerisation domain J5N61_07835 PF01137 RNA 3'-terminal phosphate cyclase J5N61_07835 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain J5N61_07850 PF01139 tRNA-splicing ligase RtcB J5N61_07860 PF00158 Sigma-54 interaction domain J5N61_07860 PF06956 Regulator of RNA terminal phosphate cyclase J5N61_07875 PF03883 Peroxide stress protein YaaA J5N61_07895 PF05690 Thiazole biosynthesis protein ThiG J5N61_07910 PF00140 Sigma-70 factor, region 1.2 J5N61_07910 PF04542 Sigma-70 region 2 J5N61_07910 PF04545 Sigma-70, region 4 J5N61_07920 PF00313 'Cold-shock' DNA-binding domain J5N61_07925 PF00271 Helicase conserved C-terminal domain J5N61_07925 PF00270 DEAD/DEAH box helicase J5N61_07930 PF01116 Fructose-bisphosphate aldolase class-II J5N61_07935 PF00639 PPIC-type PPIASE domain J5N61_07935 PF09312 SurA N-terminal domain J5N61_07940 PF04453 LPS transport system D J5N61_07940 PF03968 OstA-like protein J5N61_07945 PF01636 Phosphotransferase enzyme family J5N61_07950 PF00483 Nucleotidyl transferase J5N61_07955 PF02527 rRNA small subunit methyltransferase G J5N61_07960 PF13614 AAA domain J5N61_07965 PF17762 HTH domain found in ParB protein J5N61_07965 PF02195 ParB-like nuclease domain J5N61_07970 PF01618 MotA/TolQ/ExbB proton channel family J5N61_07980 PF00664 ABC transporter transmembrane region J5N61_07980 PF00005 ABC transporter J5N61_07985 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J5N61_07990 PF02348 Cytidylyltransferase J5N61_07995 PF09115 DNA polymerase III, delta subunit, C terminal J5N61_08000 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_08010 PF01026 TatD related DNase J5N61_08020 PF07963 Prokaryotic N-terminal methylation motif J5N61_08025 PF07963 Prokaryotic N-terminal methylation motif J5N61_08025 PF02501 Type II secretion system (T2SS), protein I J5N61_08030 PF07963 Prokaryotic N-terminal methylation motif J5N61_08030 PF11612 Type II secretion system (T2SS), protein J J5N61_08035 PF03934 Type II secretion system (T2SS), protein K J5N61_08045 PF03167 Uracil DNA glycosylase superfamily J5N61_08055 PF14437 MafB19-like deaminase J5N61_08065 PF02224 Cytidylate kinase J5N61_08070 PF00575 S1 RNA binding domain J5N61_08075 PF00216 Bacterial DNA-binding protein J5N61_08090 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_08095 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J5N61_08105 PF00743 Flavin-binding monooxygenase-like J5N61_08115 PF03969 AFG1-like ATPase J5N61_08120 PF01274 Malate synthase J5N61_08150 PF05525 Branched-chain amino acid transport protein J5N61_08155 PF00557 Metallopeptidase family M24 J5N61_08160 PF03466 LysR substrate binding domain J5N61_08160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_08165 PF04607 Region found in RelA / SpoT proteins J5N61_08165 PF02824 TGS domain J5N61_08165 PF13291 ACT domain J5N61_08175 PF00462 Glutaredoxin J5N61_08180 PF00202 Aminotransferase class-III J5N61_08185 PF00571 CBS domain J5N61_08185 PF01380 SIS domain J5N61_08215 PF00448 SRP54-type protein, GTPase domain J5N61_08215 PF02881 SRP54-type protein, helical bundle domain J5N61_08225 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J5N61_08240 PF08173 Membrane bound YbgT-like protein J5N61_08245 PF02322 Cytochrome bd terminal oxidase subunit II J5N61_08250 PF01654 Cytochrome bd terminal oxidase subunit I J5N61_08270 PF00294 pfkB family carbohydrate kinase J5N61_08275 PF08367 Peptidase M16C associated J5N61_08275 PF00675 Insulinase (Peptidase family M16) J5N61_08275 PF05193 Peptidase M16 inactive domain J5N61_08280 PF02253 Phospholipase A1 J5N61_08290 PF02386 Cation transport protein J5N61_08295 PF02080 TrkA-C domain J5N61_08295 PF02254 TrkA-N domain J5N61_08300 PF00291 Pyridoxal-phosphate dependent enzyme J5N61_08300 PF00585 C-terminal regulatory domain of Threonine dehydratase J5N61_08305 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J5N61_08320 PF01118 Semialdehyde dehydrogenase, NAD binding domain J5N61_08320 PF02774 Semialdehyde dehydrogenase, dimerisation domain J5N61_08330 PF02617 ATP-dependent Clp protease adaptor protein ClpS J5N61_08335 PF02617 ATP-dependent Clp protease adaptor protein ClpS J5N61_08340 PF00004 ATPase family associated with various cellular activities (AAA) J5N61_08340 PF07724 AAA domain (Cdc48 subfamily) J5N61_08340 PF02861 Clp amino terminal domain, pathogenicity island component J5N61_08340 PF10431 C-terminal, D2-small domain, of ClpB protein J5N61_08340 PF17871 AAA lid domain J5N61_08345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J5N61_08350 PF00005 ABC transporter J5N61_08350 PF12848 ABC transporter J5N61_08355 PF00793 DAHP synthetase I family J5N61_08370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J5N61_08370 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_08410 PF06418 CTP synthase N-terminus J5N61_08410 PF00117 Glutamine amidotransferase class-I J5N61_08415 PF00793 DAHP synthetase I family J5N61_08420 PF03952 Enolase, N-terminal domain J5N61_08420 PF00113 Enolase, C-terminal TIM barrel domain J5N61_08425 PF04977 Septum formation initiator J5N61_08430 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J5N61_08440 PF04143 Sulphur transport J5N61_08450 PF00753 Metallo-beta-lactamase superfamily J5N61_08465 PF13333 Integrase core domain J5N61_08465 PF13276 HTH-like domain J5N61_08465 PF00665 Integrase core domain J5N61_08470 PF01425 Amidase J5N61_08475 PF02785 Biotin carboxylase C-terminal domain J5N61_08475 PF00289 Biotin carboxylase, N-terminal domain J5N61_08475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5N61_08475 PF00364 Biotin-requiring enzyme J5N61_08480 PF07729 FCD domain J5N61_08480 PF00392 Bacterial regulatory proteins, gntR family J5N61_08495 PF08240 Alcohol dehydrogenase GroES-like domain J5N61_08495 PF00107 Zinc-binding dehydrogenase J5N61_08500 PF01965 DJ-1/PfpI family J5N61_08505 PF02558 Ketopantoate reductase PanE/ApbA J5N61_08505 PF08546 Ketopantoate reductase PanE/ApbA C terminal J5N61_08515 PF00171 Aldehyde dehydrogenase family J5N61_08525 PF00465 Iron-containing alcohol dehydrogenase J5N61_08535 PF07690 Major Facilitator Superfamily J5N61_08540 PF12146 Serine aminopeptidase, S33 J5N61_08545 PF02803 Thiolase, C-terminal domain J5N61_08545 PF00108 Thiolase, N-terminal domain J5N61_08550 PF01144 Coenzyme A transferase J5N61_08555 PF01144 Coenzyme A transferase J5N61_08560 PF03594 Benzoate membrane transport protein J5N61_08565 PF00106 short chain dehydrogenase J5N61_08570 PF00970 Oxidoreductase FAD-binding domain J5N61_08570 PF00111 2Fe-2S iron-sulfur cluster binding domain J5N61_08570 PF00175 Oxidoreductase NAD-binding domain J5N61_08585 PF04444 Catechol dioxygenase N terminus J5N61_08585 PF00775 Dioxygenase J5N61_08590 PF02426 Muconolactone delta-isomerase J5N61_08595 PF13378 Enolase C-terminal domain-like J5N61_08595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5N61_08600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_08600 PF03466 LysR substrate binding domain J5N61_08610 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding J5N61_08610 PF18381 YcaO cyclodehydratase C-terminal domain J5N61_08620 PF00793 DAHP synthetase I family J5N61_08625 PF01925 Sulfite exporter TauE/SafE J5N61_08640 PF02684 Lipid-A-disaccharide synthetase J5N61_08665 PF01230 HIT domain J5N61_08675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5N61_08675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5N61_08685 PF01053 Cys/Met metabolism PLP-dependent enzyme J5N61_08690 PF02575 YbaB/EbfC DNA-binding family J5N61_08695 PF02132 RecR protein J5N61_08695 PF13662 Toprim domain J5N61_08700 PF01612 3'-5' exonuclease J5N61_08700 PF00570 HRDC domain J5N61_08705 PF05166 YcgL domain J5N61_08715 PF01434 Peptidase family M41 J5N61_08715 PF17862 AAA+ lid domain J5N61_08715 PF00004 ATPase family associated with various cellular activities (AAA) J5N61_08725 PF00291 Pyridoxal-phosphate dependent enzyme J5N61_08730 PF05175 Methyltransferase small domain J5N61_08735 PF01264 Chorismate synthase J5N61_08740 PF00990 Diguanylate cyclase, GGDEF domain J5N61_08755 PF12833 Helix-turn-helix domain J5N61_08850 PF01925 Sulfite exporter TauE/SafE J5N61_08855 PF01613 Flavin reductase like domain J5N61_08860 PF01717 Cobalamin-independent synthase, Catalytic domain J5N61_08860 PF08267 Cobalamin-independent synthase, N-terminal domain J5N61_08870 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_08875 PF00593 TonB dependent receptor J5N61_08875 PF07715 TonB-dependent Receptor Plug Domain J5N61_08895 PF02654 Cobalamin-5-phosphate synthase J5N61_08905 PF02277 Phosphoribosyltransferase J5N61_08910 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J5N61_08920 PF13419 Haloacid dehalogenase-like hydrolase J5N61_08930 PF00593 TonB dependent receptor J5N61_08930 PF07715 TonB-dependent Receptor Plug Domain J5N61_08935 PF07690 Major Facilitator Superfamily J5N61_08950 PF06276 Ferric iron reductase FhuF-like transporter J5N61_08950 PF04183 IucA / IucC family J5N61_08955 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J5N61_08960 PF06276 Ferric iron reductase FhuF-like transporter J5N61_08960 PF04183 IucA / IucC family J5N61_08965 PF04073 Aminoacyl-tRNA editing domain J5N61_08975 PF03109 ABC1 family J5N61_08980 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_08985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_08985 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_08985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_08990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_08990 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_08990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_08995 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_08995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5N61_09000 PF00487 Fatty acid desaturase J5N61_09005 PF12833 Helix-turn-helix domain J5N61_09005 PF12852 Cupin J5N61_09010 PF00132 Bacterial transferase hexapeptide (six repeats) J5N61_09010 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J5N61_09015 PF07977 FabA-like domain J5N61_09020 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J5N61_09020 PF00132 Bacterial transferase hexapeptide (six repeats) J5N61_09030 PF01103 Surface antigen J5N61_09030 PF07244 Surface antigen variable number repeat J5N61_09035 PF13180 PDZ domain J5N61_09035 PF17820 PDZ domain J5N61_09035 PF02163 Peptidase family M50 J5N61_09040 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J5N61_09040 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J5N61_09040 PF13288 DXP reductoisomerase C-terminal domain J5N61_09050 PF01255 Putative undecaprenyl diphosphate synthase J5N61_09055 PF01765 Ribosome recycling factor J5N61_09060 PF00696 Amino acid kinase family J5N61_09065 PF04055 Radical SAM superfamily J5N61_09065 PF18693 TRAM domain J5N61_09065 PF00919 Uncharacterized protein family UPF0004 J5N61_09070 PF00512 His Kinase A (phospho-acceptor) domain J5N61_09070 PF00989 PAS fold J5N61_09070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_09075 PF02954 Bacterial regulatory protein, Fis family J5N61_09075 PF00072 Response regulator receiver domain J5N61_09075 PF00158 Sigma-54 interaction domain J5N61_09080 PF00440 Bacterial regulatory proteins, tetR family J5N61_09085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J5N61_09085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J5N61_09095 PF02542 YgbB family J5N61_09105 PF01266 FAD dependent oxidoreductase J5N61_09115 PF10415 Fumarase C C-terminus J5N61_09115 PF00206 Lyase J5N61_09120 PF16363 GDP-mannose 4,6 dehydratase J5N61_09125 PF02635 DsrE/DsrF-like family J5N61_09145 PF01638 HxlR-like helix-turn-helix J5N61_09150 PF00994 Probable molybdopterin binding domain J5N61_09150 PF03454 MoeA C-terminal region (domain IV) J5N61_09150 PF03453 MoeA N-terminal region (domain I and II) J5N61_09155 PF01967 MoaC family J5N61_09155 PF00994 Probable molybdopterin binding domain J5N61_09160 PF02391 MoaE protein J5N61_09170 PF06463 Molybdenum Cofactor Synthesis C J5N61_09170 PF04055 Radical SAM superfamily J5N61_09180 PF00291 Pyridoxal-phosphate dependent enzyme J5N61_09185 PF12804 MobA-like NTP transferase domain J5N61_09190 PF04324 BFD-like [2Fe-2S] binding domain J5N61_09190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J5N61_09190 PF00384 Molybdopterin oxidoreductase J5N61_09190 PF01568 Molydopterin dinucleotide binding domain J5N61_09195 PF18267 Rubredoxin NAD+ reductase C-terminal domain J5N61_09195 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_09195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J5N61_09195 PF04324 BFD-like [2Fe-2S] binding domain J5N61_09195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J5N61_09200 PF13806 Rieske-like [2Fe-2S] domain J5N61_09200 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_09200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J5N61_09200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J5N61_09200 PF04324 BFD-like [2Fe-2S] binding domain J5N61_09200 PF18267 Rubredoxin NAD+ reductase C-terminal domain J5N61_09205 PF07690 Major Facilitator Superfamily J5N61_09215 PF00005 ABC transporter J5N61_09220 PF01220 Dehydroquinase class II J5N61_09225 PF00364 Biotin-requiring enzyme J5N61_09230 PF00289 Biotin carboxylase, N-terminal domain J5N61_09230 PF02785 Biotin carboxylase C-terminal domain J5N61_09230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5N61_09240 PF01425 Amidase J5N61_09245 PF12832 MFS_1 like family J5N61_09250 PF00817 impB/mucB/samB family J5N61_09250 PF13438 Domain of unknown function (DUF4113) J5N61_09250 PF11798 IMS family HHH motif J5N61_09250 PF11799 impB/mucB/samB family C-terminal domain J5N61_09375 PF01695 IstB-like ATP binding protein J5N61_09435 PF09588 YqaJ-like viral recombinase domain J5N61_09445 PF00580 UvrD/REP helicase N-terminal domain J5N61_09445 PF13361 UvrD-like helicase C-terminal domain J5N61_09450 PF02954 Bacterial regulatory protein, Fis family J5N61_09470 PF00324 Amino acid permease J5N61_09480 PF02798 Glutathione S-transferase, N-terminal domain J5N61_09480 PF14497 Glutathione S-transferase, C-terminal domain J5N61_09495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5N61_09500 PF01645 Conserved region in glutamate synthase J5N61_09530 PF01565 FAD binding domain J5N61_09530 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J5N61_09535 PF01451 Low molecular weight phosphotyrosine protein phosphatase J5N61_09540 PF00465 Iron-containing alcohol dehydrogenase J5N61_09545 PF03061 Thioesterase superfamily J5N61_09550 PF12169 DNA polymerase III subunits gamma and tau domain III J5N61_09550 PF12170 DNA polymerase III tau subunit V interacting with alpha J5N61_09555 PF08007 Cupin superfamily protein J5N61_09565 PF13359 DDE superfamily endonuclease J5N61_09565 PF13613 Helix-turn-helix of DDE superfamily endonuclease J5N61_09580 PF00916 Sulfate permease family J5N61_09580 PF01740 STAS domain J5N61_09585 PF00375 Sodium:dicarboxylate symporter family J5N61_09595 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) J5N61_09600 PF00924 Mechanosensitive ion channel J5N61_09615 PF00005 ABC transporter J5N61_09615 PF00664 ABC transporter transmembrane region J5N61_09625 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J5N61_09625 PF12833 Helix-turn-helix domain J5N61_09630 PF01597 Glycine cleavage H-protein J5N61_09635 PF00474 Sodium:solute symporter family J5N61_09640 PF01037 Lrp/AsnC ligand binding domain J5N61_09645 PF00171 Aldehyde dehydrogenase family J5N61_09645 PF01619 Proline dehydrogenase J5N61_09645 PF14850 DNA-binding domain of Proline dehydrogenase J5N61_09645 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J5N61_09650 PF05958 tRNA (Uracil-5-)-methyltransferase J5N61_09670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J5N61_09675 PF09857 Putative toxin of bacterial toxin-antitoxin pair J5N61_09685 PF04264 YceI-like domain J5N61_09695 PF02779 Transketolase, pyrimidine binding domain J5N61_09695 PF02780 Transketolase, C-terminal domain J5N61_09695 PF00456 Transketolase, thiamine diphosphate binding domain J5N61_09700 PF02773 S-adenosylmethionine synthetase, C-terminal domain J5N61_09700 PF02772 S-adenosylmethionine synthetase, central domain J5N61_09700 PF00438 S-adenosylmethionine synthetase, N-terminal domain J5N61_09735 PF00313 'Cold-shock' DNA-binding domain J5N61_09750 PF02075 Crossover junction endodeoxyribonuclease RuvC J5N61_09755 PF01256 Carbohydrate kinase J5N61_09755 PF03853 YjeF-related protein N-terminus J5N61_09760 PF08331 Domain of unknown function (DUF1730) J5N61_09765 PF04055 Radical SAM superfamily J5N61_09765 PF06968 Biotin and Thiamin Synthesis associated domain J5N61_09780 PF16970 Type-1 fimbrial protein, A J5N61_09785 PF02753 Pili assembly chaperone PapD, C-terminal domain J5N61_09785 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J5N61_09790 PF00577 Outer membrane usher protein J5N61_09790 PF13954 PapC N-terminal domain J5N61_09790 PF13953 PapC C-terminal domain J5N61_09795 PF00419 Fimbrial protein J5N61_09820 PF00107 Zinc-binding dehydrogenase J5N61_09820 PF16884 N-terminal domain of oxidoreductase J5N61_09825 PF00440 Bacterial regulatory proteins, tetR family J5N61_09825 PF16925 Tetracyclin repressor-like, C-terminal domain J5N61_09835 PF00465 Iron-containing alcohol dehydrogenase J5N61_09850 PF00756 Putative esterase J5N61_09855 PF08240 Alcohol dehydrogenase GroES-like domain J5N61_09855 PF00107 Zinc-binding dehydrogenase J5N61_09860 PF02583 Metal-sensitive transcriptional repressor J5N61_09865 PF00698 Acyl transferase domain J5N61_09865 PF08240 Alcohol dehydrogenase GroES-like domain J5N61_09865 PF16197 Ketoacyl-synthetase C-terminal extension J5N61_09865 PF00109 Beta-ketoacyl synthase, N-terminal domain J5N61_09865 PF02801 Beta-ketoacyl synthase, C-terminal domain J5N61_09865 PF08659 KR domain J5N61_09865 PF00550 Phosphopantetheine attachment site J5N61_09865 PF14765 Polyketide synthase dehydratase J5N61_09870 PF08240 Alcohol dehydrogenase GroES-like domain J5N61_09870 PF00107 Zinc-binding dehydrogenase J5N61_09875 PF03466 LysR substrate binding domain J5N61_09875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_09880 PF00106 short chain dehydrogenase J5N61_09885 PF08240 Alcohol dehydrogenase GroES-like domain J5N61_09885 PF00107 Zinc-binding dehydrogenase J5N61_09910 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J5N61_09910 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J5N61_09915 PF00271 Helicase conserved C-terminal domain J5N61_09915 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J5N61_09915 PF00270 DEAD/DEAH box helicase J5N61_09915 PF11898 Domain of unknown function (DUF3418) J5N61_09915 PF04408 Helicase associated domain (HA2) J5N61_09925 PF10417 C-terminal domain of 1-Cys peroxiredoxin J5N61_09925 PF00578 AhpC/TSA family J5N61_09935 PF00487 Fatty acid desaturase J5N61_09950 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_09950 PF13192 Thioredoxin domain J5N61_09960 PF00043 Glutathione S-transferase, C-terminal domain J5N61_09960 PF02798 Glutathione S-transferase, N-terminal domain J5N61_09970 PF02390 Putative methyltransferase J5N61_09985 PF01979 Amidohydrolase family J5N61_09990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J5N61_09990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J5N61_10000 PF01170 Putative RNA methylase family UPF0020 J5N61_10000 PF10672 S-adenosylmethionine-dependent methyltransferase J5N61_10000 PF02926 THUMP domain J5N61_10010 PF00004 ATPase family associated with various cellular activities (AAA) J5N61_10010 PF07724 AAA domain (Cdc48 subfamily) J5N61_10010 PF17871 AAA lid domain J5N61_10010 PF02861 Clp amino terminal domain, pathogenicity island component J5N61_10010 PF10431 C-terminal, D2-small domain, of ClpB protein J5N61_10020 PF02566 OsmC-like protein J5N61_10025 PF13545 Crp-like helix-turn-helix domain J5N61_10025 PF00027 Cyclic nucleotide-binding domain J5N61_10030 PF01435 Peptidase family M48 J5N61_10035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5N61_10035 PF00364 Biotin-requiring enzyme J5N61_10035 PF00289 Biotin carboxylase, N-terminal domain J5N61_10035 PF02785 Biotin carboxylase C-terminal domain J5N61_10040 PF02682 Carboxyltransferase domain, subdomain C and D J5N61_10045 PF03746 LamB/YcsF family J5N61_10050 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_10055 PF04072 Leucine carboxyl methyltransferase J5N61_10060 PF00743 Flavin-binding monooxygenase-like J5N61_10065 PF00106 short chain dehydrogenase J5N61_10080 PF17932 Tetracyclin repressor-like, C-terminal domain J5N61_10080 PF00440 Bacterial regulatory proteins, tetR family J5N61_10105 PF00155 Aminotransferase class I and II J5N61_10105 PF00392 Bacterial regulatory proteins, gntR family J5N61_10110 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J5N61_10110 PF12833 Helix-turn-helix domain J5N61_10130 PF00491 Arginase family J5N61_10135 PF01979 Amidohydrolase family J5N61_10140 PF00324 Amino acid permease J5N61_10145 PF00221 Aromatic amino acid lyase J5N61_10150 PF17391 Urocanase N-terminal domain J5N61_10150 PF17392 Urocanase C-terminal domain J5N61_10150 PF01175 Urocanase Rossmann-like domain J5N61_10155 PF05962 HutD J5N61_10160 PF07702 UTRA domain J5N61_10160 PF00392 Bacterial regulatory proteins, gntR family J5N61_10180 PF13359 DDE superfamily endonuclease J5N61_10180 PF13613 Helix-turn-helix of DDE superfamily endonuclease J5N61_10190 PF04115 Ureidoglycolate lyase J5N61_10195 PF03561 Allantoicase repeat J5N61_10200 PF07729 FCD domain J5N61_10200 PF00392 Bacterial regulatory proteins, gntR family J5N61_10205 PF01494 FAD binding domain J5N61_10230 PF00576 HIUase/Transthyretin family J5N61_10255 PF00072 Response regulator receiver domain J5N61_10255 PF00486 Transcriptional regulatory protein, C terminal J5N61_10260 PF08521 Two-component sensor kinase N-terminal J5N61_10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_10260 PF00512 His Kinase A (phospho-acceptor) domain J5N61_10265 PF13649 Methyltransferase domain J5N61_10295 PF01925 Sulfite exporter TauE/SafE J5N61_10305 PF00753 Metallo-beta-lactamase superfamily J5N61_10310 PF13185 GAF domain J5N61_10310 PF02954 Bacterial regulatory protein, Fis family J5N61_10310 PF00158 Sigma-54 interaction domain J5N61_10315 PF09317 Domain of unknown function (DUF1974) J5N61_10315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_10315 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_10315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_10390 PF02769 AIR synthase related protein, C-terminal domain J5N61_10390 PF00586 AIR synthase related protein, N-terminal domain J5N61_10405 PF00795 Carbon-nitrogen hydrolase J5N61_10415 PF01590 GAF domain J5N61_10415 PF00158 Sigma-54 interaction domain J5N61_10430 PF02472 Biopolymer transport protein ExbD/TolR J5N61_10435 PF01618 MotA/TolQ/ExbB proton channel family J5N61_10440 PF02333 Phytase J5N61_10450 PF00072 Response regulator receiver domain J5N61_10450 PF00990 Diguanylate cyclase, GGDEF domain J5N61_10455 PF12833 Helix-turn-helix domain J5N61_10455 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J5N61_10465 PF00245 Alkaline phosphatase J5N61_10470 PF00245 Alkaline phosphatase J5N61_10485 PF00873 AcrB/AcrD/AcrF family J5N61_10490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5N61_10510 PF07731 Multicopper oxidase J5N61_10510 PF00394 Multicopper oxidase J5N61_10510 PF07732 Multicopper oxidase J5N61_10520 PF00486 Transcriptional regulatory protein, C terminal J5N61_10520 PF00072 Response regulator receiver domain J5N61_10525 PF00672 HAMP domain J5N61_10525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_10525 PF00512 His Kinase A (phospho-acceptor) domain J5N61_10570 PF14659 Phage integrase, N-terminal SAM-like domain J5N61_10570 PF00589 Phage integrase family J5N61_10625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J5N61_10625 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_10630 PF00764 Arginosuccinate synthase J5N61_10635 PF17954 Quercetinase C-terminal cupin domain J5N61_10635 PF02678 Pirin J5N61_10685 PF13359 DDE superfamily endonuclease J5N61_10685 PF13613 Helix-turn-helix of DDE superfamily endonuclease J5N61_10690 PF13359 DDE superfamily endonuclease J5N61_10690 PF13613 Helix-turn-helix of DDE superfamily endonuclease J5N61_10715 PF00239 Resolvase, N terminal domain J5N61_10715 PF02796 Helix-turn-helix domain of resolvase J5N61_10735 PF13356 Arm DNA-binding domain J5N61_10735 PF00589 Phage integrase family J5N61_10745 PF01841 Transglutaminase-like superfamily J5N61_10745 PF13559 Domain of unknown function (DUF4129) J5N61_10745 PF11992 Domain of unknown function (DUF3488) J5N61_10755 PF17863 AAA lid domain J5N61_10755 PF07726 ATPase family associated with various cellular activities (AAA) J5N61_10760 PF04328 Selenoprotein, putative J5N61_10765 PF02554 Carbon starvation protein CstA J5N61_10765 PF13722 5TM C-terminal transporter carbon starvation CstA J5N61_10770 PF09285 Elongation factor P, C-terminal J5N61_10770 PF01132 Elongation factor P (EF-P) OB domain J5N61_10770 PF08207 Elongation factor P (EF-P) KOW-like domain J5N61_10775 PF04055 Radical SAM superfamily J5N61_10790 PF01197 Ribosomal protein L31 J5N61_10795 PF13593 SBF-like CPA transporter family (DUF4137) J5N61_10800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5N61_10805 PF07690 Major Facilitator Superfamily J5N61_10810 PF05362 Lon protease (S16) C-terminal proteolytic domain J5N61_10810 PF13654 AAA domain J5N61_10815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_10815 PF03466 LysR substrate binding domain J5N61_10820 PF01476 LysM domain J5N61_10820 PF01551 Peptidase family M23 J5N61_10825 PF01975 Survival protein SurE J5N61_10840 PF07943 Penicillin-binding protein 5, C-terminal domain J5N61_10840 PF00768 D-alanyl-D-alanine carboxypeptidase J5N61_10845 PF00132 Bacterial transferase hexapeptide (six repeats) J5N61_10850 PF10946 Protein of unknown function DUF2625 J5N61_10855 PF00293 NUDIX domain J5N61_10865 PF04356 Protein of unknown function (DUF489) J5N61_10870 PF08328 Adenylosuccinate lyase C-terminal J5N61_10870 PF00206 Lyase J5N61_10885 PF00106 short chain dehydrogenase J5N61_10885 PF00561 alpha/beta hydrolase fold J5N61_10895 PF01638 HxlR-like helix-turn-helix J5N61_10910 PF00171 Aldehyde dehydrogenase family J5N61_10925 PF12697 Alpha/beta hydrolase family J5N61_10940 PF09339 IclR helix-turn-helix domain J5N61_10940 PF01614 Bacterial transcriptional regulator J5N61_10965 PF03793 PASTA domain J5N61_10965 PF00069 Protein kinase domain J5N61_10985 PF00892 EamA-like transporter family J5N61_10995 PF00814 Glycoprotease family J5N61_11000 PF01165 Ribosomal protein S21 J5N61_11005 PF09424 Yqey-like protein J5N61_11020 PF01435 Peptidase family M48 J5N61_11025 PF01553 Acyltransferase J5N61_11030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5N61_11030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5N61_11040 PF12706 Beta-lactamase superfamily domain J5N61_11055 PF13438 Domain of unknown function (DUF4113) J5N61_11055 PF11798 IMS family HHH motif J5N61_11055 PF11799 impB/mucB/samB family C-terminal domain J5N61_11055 PF00817 impB/mucB/samB family J5N61_11060 PF00717 Peptidase S24-like J5N61_11075 PF00576 HIUase/Transthyretin family J5N61_11085 PF00072 Response regulator receiver domain J5N61_11085 PF00486 Transcriptional regulatory protein, C terminal J5N61_11090 PF00672 HAMP domain J5N61_11090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_11090 PF00512 His Kinase A (phospho-acceptor) domain J5N61_11095 PF00293 NUDIX domain J5N61_11095 PF09297 NADH pyrophosphatase zinc ribbon domain J5N61_11110 PF01098 Cell cycle protein J5N61_11115 PF03741 Integral membrane protein TerC family J5N61_11115 PF03471 Transporter associated domain J5N61_11120 PF02705 K+ potassium transporter J5N61_11125 PF00005 ABC transporter J5N61_11145 PF05188 MutS domain II J5N61_11145 PF00488 MutS domain V J5N61_11145 PF05190 MutS family domain IV J5N61_11145 PF05192 MutS domain III J5N61_11145 PF01624 MutS domain I J5N61_11150 PF00037 4Fe-4S binding domain J5N61_11150 PF11953 Domain of unknown function (DUF3470) J5N61_11160 PF01596 O-methyltransferase J5N61_11170 PF00132 Bacterial transferase hexapeptide (six repeats) J5N61_11175 PF01205 Uncharacterized protein family UPF0029 J5N61_11175 PF09186 Domain of unknown function (DUF1949) J5N61_11185 PF00664 ABC transporter transmembrane region J5N61_11185 PF00005 ABC transporter J5N61_11190 PF02321 Outer membrane efflux protein J5N61_11195 PF00005 ABC transporter J5N61_11195 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5N61_11200 PF03968 OstA-like protein J5N61_11215 PF00571 CBS domain J5N61_11215 PF01380 SIS domain J5N61_11220 PF09190 DALR domain J5N61_11220 PF01406 tRNA synthetases class I (C) catalytic domain J5N61_11230 PF04170 NlpE N-terminal domain J5N61_11230 PF17185 NlpE C-terminal OB domain J5N61_11240 PF00463 Isocitrate lyase family J5N61_11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_11245 PF03466 LysR substrate binding domain J5N61_11250 PF00571 CBS domain J5N61_11250 PF03471 Transporter associated domain J5N61_11250 PF01595 Cyclin M transmembrane N-terminal domain J5N61_11255 PF00542 Ribosomal protein L7/L12 C-terminal domain J5N61_11255 PF16320 Ribosomal protein L7/L12 dimerisation domain J5N61_11265 PF00009 Elongation factor Tu GTP binding domain J5N61_11270 PF01507 Phosphoadenosine phosphosulfate reductase family J5N61_11275 PF14052 Capsule assembly protein Wzi J5N61_11280 PF00152 tRNA synthetases class II (D, K and N) J5N61_11280 PF01336 OB-fold nucleic acid binding domain J5N61_11290 PF00301 Rubredoxin J5N61_11295 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_11295 PF18113 Rubredoxin binding C-terminal domain J5N61_11300 PF00561 alpha/beta hydrolase fold J5N61_11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_11305 PF03466 LysR substrate binding domain J5N61_11310 PF01207 Dihydrouridine synthase (Dus) J5N61_11315 PF07759 Protein of unknown function (DUF1615) J5N61_11325 PF00696 Amino acid kinase family J5N61_11325 PF01472 PUA domain J5N61_11330 PF01018 GTP1/OBG J5N61_11330 PF01926 50S ribosome-binding GTPase J5N61_11345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J5N61_11345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J5N61_11360 PF00271 Helicase conserved C-terminal domain J5N61_11360 PF04851 Type III restriction enzyme, res subunit J5N61_11360 PF02151 UvrB/uvrC motif J5N61_11360 PF12344 Ultra-violet resistance protein B J5N61_11360 PF17757 UvrB interaction domain J5N61_11365 PF00106 short chain dehydrogenase J5N61_11375 PF05922 Peptidase inhibitor I9 J5N61_11375 PF00082 Subtilase family J5N61_11385 PF00155 Aminotransferase class I and II J5N61_11400 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J5N61_11405 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J5N61_11410 PF02565 Recombination protein O C terminal J5N61_11410 PF11967 Recombination protein O N terminal J5N61_11420 PF01926 50S ribosome-binding GTPase J5N61_11420 PF07650 KH domain J5N61_11425 PF00035 Double-stranded RNA binding motif J5N61_11425 PF14622 Ribonuclease-III-like J5N61_11435 PF10502 Signal peptidase, peptidase S26 J5N61_11440 PF00679 Elongation factor G C-terminus J5N61_11440 PF00009 Elongation factor Tu GTP binding domain J5N61_11440 PF03144 Elongation factor Tu domain 2 J5N61_11440 PF06421 GTP-binding protein LepA C-terminus J5N61_11450 PF13180 PDZ domain J5N61_11455 PF02910 Fumarate reductase flavoprotein C-term J5N61_11455 PF00890 FAD binding domain J5N61_11460 PF02223 Thymidylate kinase J5N61_11465 PF02618 YceG-like family J5N61_11470 PF01063 Amino-transferase class IV J5N61_11485 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_11490 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_11495 PF00005 ABC transporter J5N61_11495 PF12857 TOBE-like domain J5N61_11500 PF03466 LysR substrate binding domain J5N61_11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_11510 PF00132 Bacterial transferase hexapeptide (six repeats) J5N61_11510 PF14602 Hexapeptide repeat of succinyl-transferase J5N61_11510 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J5N61_11515 PF04055 Radical SAM superfamily J5N61_11520 PF06508 Queuosine biosynthesis protein QueC J5N61_11545 PF00578 AhpC/TSA family J5N61_11560 PF01467 Cytidylyltransferase-like J5N61_11560 PF00293 NUDIX domain J5N61_11565 PF00378 Enoyl-CoA hydratase/isomerase J5N61_11570 PF00881 Nitroreductase family J5N61_11575 PF01784 NIF3 (NGG1p interacting factor 3) J5N61_11585 PF07690 Major Facilitator Superfamily J5N61_11590 PF02769 AIR synthase related protein, C-terminal domain J5N61_11590 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J5N61_11590 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J5N61_11595 PF01966 HD domain J5N61_11600 PF07499 RuvA, C-terminal domain J5N61_11600 PF01330 RuvA N terminal domain J5N61_11605 PF17864 RuvB AAA lid domain J5N61_11605 PF05491 RuvB C-terminal winged helix domain J5N61_11605 PF05496 Holliday junction DNA helicase RuvB P-loop domain J5N61_11615 PF03061 Thioesterase superfamily J5N61_11620 PF01618 MotA/TolQ/ExbB proton channel family J5N61_11625 PF02472 Biopolymer transport protein ExbD/TolR J5N61_11635 PF04052 TolB amino-terminal domain J5N61_11635 PF07676 WD40-like Beta Propeller Repeat J5N61_11640 PF00691 OmpA family J5N61_11650 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J5N61_11655 PF00588 SpoU rRNA Methylase family J5N61_11655 PF08032 RNA 2'-O ribose methyltransferase substrate binding J5N61_11685 PF00308 Bacterial dnaA protein J5N61_11685 PF08299 Bacterial dnaA protein helix-turn-helix J5N61_11685 PF11638 DnaA N-terminal domain J5N61_11690 PF01594 AI-2E family transporter J5N61_11695 PF00586 AIR synthase related protein, N-terminal domain J5N61_11695 PF02769 AIR synthase related protein, C-terminal domain J5N61_11700 PF00551 Formyl transferase J5N61_11710 PF06965 Na+/H+ antiporter 1 J5N61_11710 PF01343 Peptidase family S49 J5N61_11720 PF13567 Domain of unknown function (DUF4131) J5N61_11720 PF00753 Metallo-beta-lactamase superfamily J5N61_11720 PF03772 Competence protein J5N61_11725 PF00005 ABC transporter J5N61_11730 PF02687 FtsX-like permease family J5N61_11730 PF12704 MacB-like periplasmic core domain J5N61_11745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J5N61_11760 PF00266 Aminotransferase class-V J5N61_11770 PF13533 Biotin-lipoyl like J5N61_11785 PF03989 DNA gyrase C-terminal domain, beta-propeller J5N61_11785 PF00521 DNA gyrase/topoisomerase IV, subunit A J5N61_11790 PF05163 DinB family J5N61_11795 PF01012 Electron transfer flavoprotein domain J5N61_11795 PF00766 Electron transfer flavoprotein FAD-binding domain J5N61_11800 PF01012 Electron transfer flavoprotein domain J5N61_11805 PF02899 Phage integrase, N-terminal SAM-like domain J5N61_11805 PF00589 Phage integrase family J5N61_11810 PF01810 LysE type translocator J5N61_11820 PF01678 Diaminopimelate epimerase J5N61_11825 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J5N61_11825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J5N61_11835 PF00324 Amino acid permease J5N61_11840 PF01235 Sodium:alanine symporter family J5N61_11845 PF18073 Rubredoxin metal binding domain J5N61_11855 PF01384 Phosphate transporter family J5N61_11860 PF02574 Homocysteine S-methyltransferase J5N61_11860 PF00809 Pterin binding enzyme J5N61_11860 PF02965 Vitamin B12 dependent methionine synthase, activation domain J5N61_11860 PF02310 B12 binding domain J5N61_11860 PF02607 B12 binding domain J5N61_11890 PF01327 Polypeptide deformylase J5N61_11910 PF00582 Universal stress protein family J5N61_11915 PF02668 Taurine catabolism dioxygenase TauD, TfdA family J5N61_11920 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_11925 PF00005 ABC transporter J5N61_11930 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J5N61_11935 PF02417 Chromate transporter J5N61_11940 PF01545 Cation efflux family J5N61_11940 PF16916 Dimerisation domain of Zinc Transporter J5N61_11945 PF02583 Metal-sensitive transcriptional repressor J5N61_11950 PF00005 ABC transporter J5N61_11950 PF03459 TOBE domain J5N61_11955 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_11970 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J5N61_11980 PF08212 Lipocalin-like domain J5N61_11985 PF00324 Amino acid permease J5N61_11990 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J5N61_11995 PF04996 Succinylarginine dihydrolase J5N61_12000 PF00171 Aldehyde dehydrogenase family J5N61_12005 PF04958 Arginine N-succinyltransferase beta subunit J5N61_12010 PF00202 Aminotransferase class-III J5N61_12015 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J5N61_12015 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J5N61_12050 PF13356 Arm DNA-binding domain J5N61_12050 PF00589 Phage integrase family J5N61_12090 PF00436 Single-strand binding protein family J5N61_12100 PF00403 Heavy-metal-associated domain J5N61_12105 PF09278 MerR, DNA binding J5N61_12105 PF00376 MerR family regulatory protein J5N61_12115 PF07690 Major Facilitator Superfamily J5N61_12120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5N61_12120 PF00529 HlyD membrane-fusion protein of T1SS J5N61_12125 PF03061 Thioesterase superfamily J5N61_12130 PF00490 Delta-aminolevulinic acid dehydratase J5N61_12135 PF01266 FAD dependent oxidoreductase J5N61_12140 PF01370 NAD dependent epimerase/dehydratase family J5N61_12140 PF08338 Domain of unknown function (DUF1731) J5N61_12165 PF00378 Enoyl-CoA hydratase/isomerase J5N61_12190 PF12320 Type 5 capsule protein repressor C-terminal domain J5N61_12190 PF00149 Calcineurin-like phosphoesterase J5N61_12200 PF01168 Alanine racemase, N-terminal domain J5N61_12205 PF00437 Type II/IV secretion system protein J5N61_12210 PF00437 Type II/IV secretion system protein J5N61_12215 PF01475 Ferric uptake regulator family J5N61_12220 PF04355 SmpA / OmlA family J5N61_12225 PF03658 RnfH family Ubiquitin J5N61_12235 PF01814 Hemerythrin HHE cation binding domain J5N61_12240 PF13230 Glutamine amidotransferases class-II J5N61_12250 PF00696 Amino acid kinase family J5N61_12255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J5N61_12255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J5N61_12255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J5N61_12255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J5N61_12260 PF00692 dUTPase J5N61_12265 PF00580 UvrD/REP helicase N-terminal domain J5N61_12265 PF13361 UvrD-like helicase C-terminal domain J5N61_12270 PF13488 Glycine zipper J5N61_12270 PF00691 OmpA family J5N61_12275 PF01553 Acyltransferase J5N61_12285 PF03775 Septum formation inhibitor MinC, C-terminal domain J5N61_12290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J5N61_12295 PF03776 Septum formation topological specificity factor MinE J5N61_12305 PF01810 LysE type translocator J5N61_12310 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J5N61_12310 PF17854 FtsK alpha domain J5N61_12310 PF09397 Ftsk gamma domain J5N61_12310 PF01580 FtsK/SpoIIIE family J5N61_12315 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_12320 PF13847 Methyltransferase domain J5N61_12320 PF10119 Predicted methyltransferase regulatory domain J5N61_12325 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J5N61_12330 PF04376 Arginine-tRNA-protein transferase, N terminus J5N61_12330 PF04377 Arginine-tRNA-protein transferase, C terminus J5N61_12335 PF00583 Acetyltransferase (GNAT) family J5N61_12350 PF00009 Elongation factor Tu GTP binding domain J5N61_12350 PF03143 Elongation factor Tu C-terminal domain J5N61_12350 PF03144 Elongation factor Tu domain 2 J5N61_12355 PF00679 Elongation factor G C-terminus J5N61_12355 PF14492 Elongation Factor G, domain II J5N61_12355 PF03764 Elongation factor G, domain IV J5N61_12355 PF00009 Elongation factor Tu GTP binding domain J5N61_12355 PF03144 Elongation factor Tu domain 2 J5N61_12360 PF00177 Ribosomal protein S7p/S5e J5N61_12365 PF00164 Ribosomal protein S12/S23 J5N61_12370 PF12787 EcsC protein family J5N61_12375 PF00109 Beta-ketoacyl synthase, N-terminal domain J5N61_12375 PF02801 Beta-ketoacyl synthase, C-terminal domain J5N61_12380 PF03653 Uncharacterised protein family (UPF0093) J5N61_12395 PF00795 Carbon-nitrogen hydrolase J5N61_12395 PF02540 NAD synthase J5N61_12420 PF00037 4Fe-4S binding domain J5N61_12425 PF01467 Cytidylyltransferase-like J5N61_12430 PF01668 SmpB protein J5N61_12435 PF03358 NADPH-dependent FMN reductase J5N61_12440 PF02578 Multi-copper polyphenol oxidoreductase laccase J5N61_12445 PF00849 RNA pseudouridylate synthase J5N61_12445 PF01479 S4 domain J5N61_12450 PF13525 Outer membrane lipoprotein J5N61_12455 PF01807 CHC2 zinc finger J5N61_12455 PF08278 DNA primase DnaG DnaB-binding J5N61_12455 PF10410 DnaB-helicase binding domain of primase J5N61_12455 PF08275 DNA primase catalytic core, N-terminal domain J5N61_12460 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J5N61_12460 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J5N61_12460 PF01488 Shikimate / quinate 5-dehydrogenase J5N61_12470 PF03550 Outer membrane lipoprotein LolB J5N61_12475 PF00288 GHMP kinases N terminal domain J5N61_12475 PF08544 GHMP kinases C terminal J5N61_12500 PF14572 Phosphoribosyl synthetase-associated domain J5N61_12500 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J5N61_12505 PF01386 Ribosomal L25p family J5N61_12510 PF01195 Peptidyl-tRNA hydrolase J5N61_12515 PF02261 Aspartate decarboxylase J5N61_12520 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_12540 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J5N61_12545 PF13419 Haloacid dehalogenase-like hydrolase J5N61_12550 PF03070 TENA/THI-4/PQQC family J5N61_12550 PF02581 Thiamine monophosphate synthase J5N61_12550 PF08543 Phosphomethylpyrimidine kinase J5N61_12555 PF04972 BON domain J5N61_12555 PF01476 LysM domain J5N61_12560 PF00550 Phosphopantetheine attachment site J5N61_12570 PF00550 Phosphopantetheine attachment site J5N61_12580 PF00698 Acyl transferase domain J5N61_12585 PF01783 Ribosomal L32p protein family J5N61_12590 PF02620 Large ribosomal RNA subunit accumulation protein YceD J5N61_12595 PF04315 Elongation factor P hydroxylase J5N61_12600 PF01300 Telomere recombination J5N61_12610 PF02616 Segregation and condensation protein ScpA J5N61_12615 PF04079 Segregation and condensation complex subunit ScpB J5N61_12620 PF00849 RNA pseudouridylate synthase J5N61_12620 PF01479 S4 domain J5N61_12625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5N61_12625 PF00005 ABC transporter J5N61_12630 PF12911 N-terminal TM domain of oligopeptide transport permease C J5N61_12630 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_12635 PF00528 Binding-protein-dependent transport system inner membrane component J5N61_12650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5N61_12655 PF07715 TonB-dependent Receptor Plug Domain J5N61_12655 PF00593 TonB dependent receptor J5N61_12665 PF01618 MotA/TolQ/ExbB proton channel family J5N61_12670 PF02472 Biopolymer transport protein ExbD/TolR J5N61_12675 PF02472 Biopolymer transport protein ExbD/TolR J5N61_12695 PF00155 Aminotransferase class I and II J5N61_12700 PF06968 Biotin and Thiamin Synthesis associated domain J5N61_12700 PF04055 Radical SAM superfamily J5N61_12700 PF00202 Aminotransferase class-III J5N61_12705 PF08241 Methyltransferase domain J5N61_12705 PF12697 Alpha/beta hydrolase family J5N61_12715 PF00578 AhpC/TSA family J5N61_12720 PF00210 Ferritin-like domain J5N61_12735 PF12826 Helix-hairpin-helix motif J5N61_12735 PF03120 NAD-dependent DNA ligase OB-fold domain J5N61_12735 PF01653 NAD-dependent DNA ligase adenylation domain J5N61_12735 PF00533 BRCA1 C Terminus (BRCT) domain J5N61_12735 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J5N61_12745 PF02463 RecF/RecN/SMC N terminal domain J5N61_12745 PF06470 SMC proteins Flexible Hinge Domain J5N61_12755 PF01925 Sulfite exporter TauE/SafE J5N61_12765 PF03309 Type III pantothenate kinase J5N61_12775 PF00448 SRP54-type protein, GTPase domain J5N61_12775 PF02881 SRP54-type protein, helical bundle domain J5N61_12775 PF02978 Signal peptide binding domain J5N61_12785 PF01207 Dihydrouridine synthase (Dus) J5N61_12815 PF00692 dUTPase J5N61_12835 PF10609 NUBPL iron-transfer P-loop NTPase J5N61_12845 PF13302 Acetyltransferase (GNAT) domain J5N61_12860 PF09334 tRNA synthetases class I (M) J5N61_12860 PF01588 Putative tRNA binding domain J5N61_12870 PF00753 Metallo-beta-lactamase superfamily J5N61_12870 PF16123 Hydroxyacylglutathione hydrolase C-terminus J5N61_12900 PF00291 Pyridoxal-phosphate dependent enzyme J5N61_12920 PF05552 Conserved TM helix J5N61_12935 PF00970 Oxidoreductase FAD-binding domain J5N61_12935 PF00175 Oxidoreductase NAD-binding domain J5N61_12940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_12940 PF03466 LysR substrate binding domain J5N61_12945 PF00313 'Cold-shock' DNA-binding domain J5N61_12960 PF00361 Proton-conducting membrane transporter J5N61_12965 PF00361 Proton-conducting membrane transporter J5N61_12970 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J5N61_12970 PF00361 Proton-conducting membrane transporter J5N61_12975 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J5N61_12980 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J5N61_12985 PF12838 4Fe-4S dicluster domain J5N61_12990 PF00146 NADH dehydrogenase J5N61_12995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J5N61_12995 PF00384 Molybdopterin oxidoreductase J5N61_12995 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J5N61_13000 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J5N61_13000 PF10531 SLBB domain J5N61_13000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J5N61_13010 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J5N61_13010 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J5N61_13015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J5N61_13020 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J5N61_13035 PF00512 His Kinase A (phospho-acceptor) domain J5N61_13035 PF00672 HAMP domain J5N61_13035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_13040 PF00486 Transcriptional regulatory protein, C terminal J5N61_13040 PF00072 Response regulator receiver domain J5N61_13045 PF02867 Ribonucleotide reductase, barrel domain J5N61_13045 PF03477 ATP cone domain J5N61_13045 PF00317 Ribonucleotide reductase, all-alpha domain J5N61_13060 PF00268 Ribonucleotide reductase, small chain J5N61_13065 PF06039 Malate:quinone oxidoreductase (Mqo) J5N61_13070 PF05977 Transmembrane secretion effector J5N61_13090 PF02028 BCCT, betaine/carnitine/choline family transporter J5N61_13095 PF13977 BetI-type transcriptional repressor, C-terminal J5N61_13095 PF00440 Bacterial regulatory proteins, tetR family J5N61_13100 PF00171 Aldehyde dehydrogenase family J5N61_13105 PF00732 GMC oxidoreductase J5N61_13105 PF05199 GMC oxidoreductase J5N61_13115 PF00107 Zinc-binding dehydrogenase J5N61_13115 PF08240 Alcohol dehydrogenase GroES-like domain J5N61_13120 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J5N61_13120 PF14572 Phosphoribosyl synthetase-associated domain J5N61_13125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J5N61_13135 PF05199 GMC oxidoreductase J5N61_13135 PF00732 GMC oxidoreductase J5N61_13140 PF08378 Nuclease-related domain J5N61_13170 PF02445 Quinolinate synthetase A protein J5N61_13175 PF01960 ArgJ family J5N61_13180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J5N61_13180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J5N61_13185 PF00893 Small Multidrug Resistance protein J5N61_13215 PF00834 Ribulose-phosphate 3 epimerase family J5N61_13225 PF00756 Putative esterase J5N61_13235 PF04445 Putative SAM-dependent methyltransferase J5N61_13240 PF02673 Bacitracin resistance protein BacA J5N61_13245 PF00814 Glycoprotease family J5N61_13255 PF00293 NUDIX domain J5N61_13295 PF04715 Anthranilate synthase component I, N terminal region J5N61_13295 PF00425 chorismate binding enzyme J5N61_13300 PF00155 Aminotransferase class I and II J5N61_13305 PF00815 Histidinol dehydrogenase J5N61_13310 PF01634 ATP phosphoribosyltransferase J5N61_13315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J5N61_13320 PF01722 BolA-like protein J5N61_13325 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J5N61_13330 PF00309 Sigma-54 factor, Activator interacting domain (AID) J5N61_13330 PF04552 Sigma-54, DNA binding domain J5N61_13330 PF04963 Sigma-54 factor, core binding domain J5N61_13375 PF00795 Carbon-nitrogen hydrolase J5N61_13385 PF02566 OsmC-like protein J5N61_13390 PF00437 Type II/IV secretion system protein J5N61_13410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J5N61_13410 PF01612 3'-5' exonuclease J5N61_13410 PF00476 DNA polymerase family A J5N61_13410 PF01367 5'-3' exonuclease, C-terminal SAM fold J5N61_13415 PF02325 YGGT family J5N61_13420 PF14748 Pyrroline-5-carboxylate reductase dimerisation J5N61_13420 PF03807 NADP oxidoreductase coenzyme F420-dependent J5N61_13425 PF11734 TilS substrate C-terminal domain J5N61_13425 PF09179 TilS substrate binding domain J5N61_13425 PF01171 PP-loop family J5N61_13430 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J5N61_13435 PF02541 Ppx/GppA phosphatase family J5N61_13440 PF00085 Thioredoxin J5N61_13445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5N61_13445 PF07498 Rho termination factor, N-terminal domain J5N61_13445 PF07497 Rho termination factor, RNA-binding domain J5N61_13455 PF00216 Bacterial DNA-binding protein J5N61_13460 PF03483 B3/4 domain J5N61_13460 PF03147 Ferredoxin-fold anticodon binding domain J5N61_13460 PF01588 Putative tRNA binding domain J5N61_13460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J5N61_13460 PF03484 tRNA synthetase B5 domain J5N61_13465 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J5N61_13465 PF01409 tRNA synthetases class II core domain (F) J5N61_13480 PF00453 Ribosomal protein L20 J5N61_13485 PF01632 Ribosomal protein L35 J5N61_13495 PF09335 SNARE associated Golgi protein J5N61_13500 PF00043 Glutathione S-transferase, C-terminal domain J5N61_13500 PF02798 Glutathione S-transferase, N-terminal domain J5N61_13505 PF00011 Hsp20/alpha crystallin family J5N61_13510 PF05198 Translation initiation factor IF-3, N-terminal domain J5N61_13510 PF00707 Translation initiation factor IF-3, C-terminal domain J5N61_13515 PF03129 Anticodon binding domain J5N61_13515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J5N61_13515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J5N61_13515 PF02824 TGS domain J5N61_13520 PF00501 AMP-binding enzyme J5N61_13520 PF13193 AMP-binding enzyme C-terminal domain J5N61_13525 PF04751 Protein of unknown function (DUF615) J5N61_13530 PF00381 PTS HPr component phosphorylation site J5N61_13535 PF03668 P-loop ATPase protein family J5N61_13540 PF02569 Pantoate-beta-alanine ligase J5N61_13545 PF02548 Ketopantoate hydroxymethyltransferase J5N61_13550 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J5N61_13555 PF01743 Poly A polymerase head domain J5N61_13555 PF12626 Polymerase A arginine-rich C-terminus J5N61_13555 PF12627 Probable RNA and SrmB- binding site of polymerase A J5N61_13565 PF03819 MazG nucleotide pyrophosphohydrolase domain J5N61_13575 PF02824 TGS domain J5N61_13575 PF04607 Region found in RelA / SpoT proteins J5N61_13575 PF13291 ACT domain J5N61_13580 PF05958 tRNA (Uracil-5-)-methyltransferase J5N61_13590 PF00291 Pyridoxal-phosphate dependent enzyme J5N61_13595 PF00672 HAMP domain J5N61_13595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_13595 PF00512 His Kinase A (phospho-acceptor) domain J5N61_13595 PF01627 Hpt domain J5N61_13595 PF00072 Response regulator receiver domain J5N61_13595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J5N61_13600 PF00378 Enoyl-CoA hydratase/isomerase J5N61_13605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5N61_13605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5N61_13610 PF01261 Xylose isomerase-like TIM barrel J5N61_13625 PF00909 Ammonium Transporter Family J5N61_13625 PF00672 HAMP domain J5N61_13630 PF00106 short chain dehydrogenase J5N61_13635 PF02233 NAD(P) transhydrogenase beta subunit J5N61_13640 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J5N61_13645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J5N61_13645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J5N61_13650 PF00376 MerR family regulatory protein J5N61_13650 PF09278 MerR, DNA binding J5N61_13660 PF07690 Major Facilitator Superfamily J5N61_13785 PF03354 Phage Terminase J5N61_13835 PF00717 Peptidase S24-like J5N61_13835 PF01726 LexA DNA binding domain J5N61_13885 PF00145 C-5 cytosine-specific DNA methylase J5N61_13890 PF00589 Phage integrase family J5N61_13895 PF01207 Dihydrouridine synthase (Dus) J5N61_13905 PF00899 ThiF family J5N61_13920 PF00694 Aconitase C-terminal domain J5N61_13920 PF00330 Aconitase family (aconitate hydratase) J5N61_13925 PF01026 TatD related DNase J5N61_13930 PF11738 Protein of unknown function (DUF3298) J5N61_13930 PF13739 Deacetylase PdaC J5N61_13930 PF01522 Polysaccharide deacetylase J5N61_13940 PF00009 Elongation factor Tu GTP binding domain J5N61_13940 PF03144 Elongation factor Tu domain 2 J5N61_13940 PF16658 Class II release factor RF3, C-terminal domain J5N61_13955 PF03358 NADPH-dependent FMN reductase J5N61_13960 PF01758 Sodium Bile acid symporter family J5N61_13970 PF01022 Bacterial regulatory protein, arsR family J5N61_13975 PF03960 ArsC family J5N61_13980 PF00561 alpha/beta hydrolase fold J5N61_13985 PF03707 Bacterial signalling protein N terminal repeat J5N61_13985 PF00563 EAL domain J5N61_13985 PF00990 Diguanylate cyclase, GGDEF domain J5N61_13990 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J5N61_13990 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J5N61_13995 PF10369 Small subunit of acetolactate synthase J5N61_14000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5N61_14000 PF00205 Thiamine pyrophosphate enzyme, central domain J5N61_14000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5N61_14010 PF09334 tRNA synthetases class I (M) J5N61_14010 PF13603 Leucyl-tRNA synthetase, Domain 2 J5N61_14010 PF08264 Anticodon-binding domain of tRNA J5N61_14010 PF00133 tRNA synthetases class I (I, L, M and V) J5N61_14020 PF06144 DNA polymerase III, delta subunit J5N61_14030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5N61_14035 PF00005 ABC transporter J5N61_14035 PF02687 FtsX-like permease family J5N61_14035 PF12704 MacB-like periplasmic core domain J5N61_14040 PF02321 Outer membrane efflux protein J5N61_14065 PF00929 Exonuclease J5N61_14070 PF03193 RsgA GTPase J5N61_14080 PF00462 Glutaredoxin J5N61_14085 PF02556 Preprotein translocase subunit SecB J5N61_14095 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J5N61_14095 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J5N61_14105 PF02441 Flavoprotein J5N61_14105 PF04127 DNA / pantothenate metabolism flavoprotein J5N61_14110 PF04002 RadC-like JAB domain J5N61_14115 PF01062 Bestrophin, RFP-TM, chloride channel J5N61_14120 PF02811 PHP domain J5N61_14125 PF04279 Intracellular septation protein A J5N61_14130 PF03795 YCII-related domain J5N61_14140 PF01266 FAD dependent oxidoreductase J5N61_14140 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J5N61_14150 PF04461 Protein of unknown function (DUF520) J5N61_14165 PF13185 GAF domain J5N61_14170 PF03061 Thioesterase superfamily J5N61_14175 PF00085 Thioredoxin J5N61_14180 PF00561 alpha/beta hydrolase fold J5N61_14185 PF04273 Putative phosphatase (DUF442) J5N61_14185 PF00753 Metallo-beta-lactamase superfamily J5N61_14230 PF17152 Periplasmic sensor domain J5N61_14230 PF00990 Diguanylate cyclase, GGDEF domain J5N61_14235 PF00691 OmpA family J5N61_14235 PF01389 OmpA-like transmembrane domain J5N61_14240 PF00149 Calcineurin-like phosphoesterase J5N61_14240 PF10518 TAT (twin-arginine translocation) pathway signal sequence J5N61_14245 PF13091 PLD-like domain J5N61_14255 PF16360 GTP-binding GTPase Middle Region J5N61_14255 PF13167 GTP-binding GTPase N-terminal J5N61_14255 PF01926 50S ribosome-binding GTPase J5N61_14280 PF17804 Tail specific protease N-terminal domain J5N61_14280 PF00595 PDZ domain J5N61_14280 PF03572 Peptidase family S41 J5N61_14280 PF11818 C-terminal domain of tail specific protease (DUF3340) J5N61_14285 PF00933 Glycosyl hydrolase family 3 N terminal domain J5N61_14295 PF12697 Alpha/beta hydrolase family J5N61_14300 PF00171 Aldehyde dehydrogenase family J5N61_14305 PF00871 Acetokinase family J5N61_14310 PF07085 DRTGG domain J5N61_14310 PF01515 Phosphate acetyl/butaryl transferase J5N61_14325 PF05681 Fumarate hydratase (Fumerase) J5N61_14325 PF05683 Fumarase C-terminus J5N61_14340 PF07724 AAA domain (Cdc48 subfamily) J5N61_14340 PF10431 C-terminal, D2-small domain, of ClpB protein J5N61_14340 PF06689 ClpX C4-type zinc finger J5N61_14345 PF00574 Clp protease J5N61_14350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J5N61_14350 PF05698 Bacterial trigger factor protein (TF) C-terminus J5N61_14350 PF05697 Bacterial trigger factor protein (TF) J5N61_14360 PF07715 TonB-dependent Receptor Plug Domain J5N61_14360 PF00593 TonB dependent receptor J5N61_14365 PF18331 PKHD-type hydroxylase C-terminal domain J5N61_14365 PF13640 2OG-Fe(II) oxygenase superfamily J5N61_14370 PF00682 HMGL-like J5N61_14370 PF08502 LeuA allosteric (dimerisation) domain J5N61_14375 PF00561 alpha/beta hydrolase fold J5N61_14380 PF00561 alpha/beta hydrolase fold J5N61_14380 PF07021 Methionine biosynthesis protein MetW J5N61_14395 PF01725 Ham1 family J5N61_14400 PF02416 mttA/Hcf106 family J5N61_14405 PF02416 mttA/Hcf106 family J5N61_14410 PF00902 Sec-independent protein translocase protein (TatC) J5N61_14425 PF01790 Prolipoprotein diacylglyceryl transferase J5N61_14435 PF03358 NADPH-dependent FMN reductase J5N61_14440 PF03631 Virulence factor BrkB J5N61_14460 PF01557 Fumarylacetoacetate (FAA) hydrolase family J5N61_14500 PF17876 Cold shock domain J5N61_14500 PF08206 Ribonuclease B OB domain J5N61_14500 PF00773 RNB domain J5N61_14500 PF00575 S1 RNA binding domain J5N61_14500 PF08461 Ribonuclease R winged-helix domain J5N61_14510 PF01432 Peptidase family M3 J5N61_14530 PF00892 EamA-like transporter family J5N61_14565 PF03937 Flavinator of succinate dehydrogenase J5N61_14570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_14570 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_14570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_14580 PF00743 Flavin-binding monooxygenase-like J5N61_14590 PF01196 Ribosomal protein L17 J5N61_14595 PF01000 RNA polymerase Rpb3/RpoA insert domain J5N61_14595 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J5N61_14595 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J5N61_14600 PF00163 Ribosomal protein S4/S9 N-terminal domain J5N61_14600 PF01479 S4 domain J5N61_14605 PF00411 Ribosomal protein S11 J5N61_14610 PF00416 Ribosomal protein S13/S18 J5N61_14615 PF00444 Ribosomal protein L36 J5N61_14620 PF00344 SecY translocase J5N61_14625 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J5N61_14630 PF00327 Ribosomal protein L30p/L7e J5N61_14635 PF00333 Ribosomal protein S5, N-terminal domain J5N61_14635 PF03719 Ribosomal protein S5, C-terminal domain J5N61_14640 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J5N61_14645 PF00347 Ribosomal protein L6 J5N61_14650 PF00410 Ribosomal protein S8 J5N61_14655 PF00253 Ribosomal protein S14p/S29e J5N61_14660 PF00281 Ribosomal protein L5 J5N61_14660 PF00673 ribosomal L5P family C-terminus J5N61_14665 PF00467 KOW motif J5N61_14665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J5N61_14670 PF00238 Ribosomal protein L14p/L23e J5N61_14675 PF00366 Ribosomal protein S17 J5N61_14680 PF00831 Ribosomal L29 protein J5N61_14685 PF00252 Ribosomal protein L16p/L10e J5N61_14690 PF00189 Ribosomal protein S3, C-terminal domain J5N61_14690 PF07650 KH domain J5N61_14695 PF00237 Ribosomal protein L22p/L17e J5N61_14700 PF00203 Ribosomal protein S19 J5N61_14705 PF00181 Ribosomal Proteins L2, RNA binding domain J5N61_14705 PF03947 Ribosomal Proteins L2, C-terminal domain J5N61_14710 PF00276 Ribosomal protein L23 J5N61_14715 PF00573 Ribosomal protein L4/L1 family J5N61_14720 PF00297 Ribosomal protein L3 J5N61_14725 PF00338 Ribosomal protein S10p/S20e J5N61_14730 PF00117 Glutamine amidotransferase class-I J5N61_14735 PF01053 Cys/Met metabolism PLP-dependent enzyme J5N61_14740 PF05872 Bacterial protein of unknown function (DUF853) J5N61_14745 PF00970 Oxidoreductase FAD-binding domain J5N61_14745 PF00042 Globin J5N61_14745 PF00175 Oxidoreductase NAD-binding domain J5N61_14750 PF02082 Transcriptional regulator J5N61_14755 PF01926 50S ribosome-binding GTPase J5N61_14765 PF00375 Sodium:dicarboxylate symporter family J5N61_14775 PF01553 Acyltransferase J5N61_14790 PF17191 RecG wedge domain J5N61_14790 PF00270 DEAD/DEAH box helicase J5N61_14790 PF00271 Helicase conserved C-terminal domain J5N61_14795 PF00156 Phosphoribosyl transferase domain J5N61_14805 PF03641 Possible lysine decarboxylase J5N61_14810 PF01544 CorA-like Mg2+ transporter protein J5N61_14825 PF05494 MlaC protein J5N61_14830 PF02470 MlaD protein J5N61_14835 PF02405 Permease MlaE J5N61_14840 PF00005 ABC transporter J5N61_14845 PF00270 DEAD/DEAH box helicase J5N61_14845 PF00271 Helicase conserved C-terminal domain J5N61_14850 PF00459 Inositol monophosphatase family J5N61_14855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J5N61_14855 PF02779 Transketolase, pyrimidine binding domain J5N61_14855 PF02780 Transketolase, C-terminal domain J5N61_14860 PF00925 GTP cyclohydrolase II J5N61_14865 PF01218 Coproporphyrinogen III oxidase J5N61_14870 PF01488 Shikimate / quinate 5-dehydrogenase J5N61_14870 PF08501 Shikimate dehydrogenase substrate binding domain J5N61_14870 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J5N61_14880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_14880 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_14880 PF12806 Acetyl-CoA dehydrogenase C-terminal like J5N61_14880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_14890 PF04024 PspC domain J5N61_14895 PF00571 CBS domain J5N61_14895 PF01743 Poly A polymerase head domain J5N61_14905 PF00939 Sodium:sulfate symporter transmembrane region J5N61_14920 PF02091 Glycyl-tRNA synthetase alpha subunit J5N61_14925 PF02092 Glycyl-tRNA synthetase beta subunit J5N61_14925 PF05746 DALR anticodon binding domain J5N61_14955 PF01938 TRAM domain J5N61_14955 PF05958 tRNA (Uracil-5-)-methyltransferase J5N61_14970 PF01209 ubiE/COQ5 methyltransferase family J5N61_14980 PF13614 AAA domain J5N61_14985 PF01594 AI-2E family transporter J5N61_14990 PF00080 Copper/zinc superoxide dismutase (SODC) J5N61_14995 PF12805 FUSC-like inner membrane protein yccS J5N61_15000 PF07690 Major Facilitator Superfamily J5N61_15015 PF02525 Flavodoxin-like fold J5N61_15020 PF03992 Antibiotic biosynthesis monooxygenase J5N61_15035 PF02913 FAD linked oxidases, C-terminal domain J5N61_15035 PF01565 FAD binding domain J5N61_15040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5N61_15040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5N61_15045 PF00892 EamA-like transporter family J5N61_15050 PF00892 EamA-like transporter family J5N61_15060 PF01925 Sulfite exporter TauE/SafE J5N61_15065 PF09157 Pseudouridine synthase II TruB, C-terminal J5N61_15065 PF16198 tRNA pseudouridylate synthase B C-terminal domain J5N61_15065 PF01509 TruB family pseudouridylate synthase (N terminal domain) J5N61_15070 PF03280 Proteobacterial lipase chaperone protein J5N61_15075 PF00561 alpha/beta hydrolase fold J5N61_15080 PF01245 Ribosomal protein L19 J5N61_15085 PF01746 tRNA (Guanine-1)-methyltransferase J5N61_15090 PF05239 PRC-barrel domain J5N61_15090 PF01782 RimM N-terminal domain J5N61_15095 PF00886 Ribosomal protein S16 J5N61_15105 PF07963 Prokaryotic N-terminal methylation motif J5N61_15105 PF00114 Pilin (bacterial filament) J5N61_15130 PF07963 Prokaryotic N-terminal methylation motif J5N61_15130 PF14245 Type IV pilin PilA J5N61_15135 PF02401 LytB protein J5N61_15140 PF00625 Guanylate kinase J5N61_15145 PF01192 RNA polymerase Rpb6 J5N61_15150 PF13291 ACT domain J5N61_15150 PF04607 Region found in RelA / SpoT proteins J5N61_15150 PF02824 TGS domain J5N61_15155 PF01042 Endoribonuclease L-PSP J5N61_15160 PF04324 BFD-like [2Fe-2S] binding domain J5N61_15165 PF00210 Ferritin-like domain J5N61_15170 PF04932 O-Antigen ligase J5N61_15170 PF15864 Protein glycosylation ligase J5N61_15170 PF11846 Virulence factor membrane-bound polymerase, C-terminal J5N61_15180 PF07963 Prokaryotic N-terminal methylation motif J5N61_15180 PF00114 Pilin (bacterial filament) J5N61_15185 PF07963 Prokaryotic N-terminal methylation motif J5N61_15185 PF00114 Pilin (bacterial filament) J5N61_15240 PF01381 Helix-turn-helix J5N61_15250 PF04536 TPM domain J5N61_15255 PF04011 LemA family J5N61_15260 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J5N61_15260 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5N61_15265 PF00310 Glutamine amidotransferases class-II J5N61_15265 PF04898 Glutamate synthase central domain J5N61_15265 PF01493 GXGXG motif J5N61_15265 PF01645 Conserved region in glutamate synthase J5N61_15275 PF01761 3-dehydroquinate synthase J5N61_15280 PF01202 Shikimate kinase J5N61_15285 PF11741 AMIN domain J5N61_15285 PF00263 Bacterial type II and III secretion system protein J5N61_15285 PF03958 Bacterial type II/III secretion system short domain J5N61_15285 PF07660 Secretin and TonB N terminus short domain J5N61_15295 PF04350 Pilus assembly protein, PilO J5N61_15300 PF05137 Fimbrial assembly protein (PilN) J5N61_15305 PF11104 Type IV pilus assembly protein PilM; J5N61_15310 PF00912 Transglycosylase J5N61_15310 PF00905 Penicillin binding protein transpeptidase domain J5N61_15310 PF17092 Penicillin-binding protein OB-like domain J5N61_15315 PF13847 Methyltransferase domain J5N61_15320 PF00953 Glycosyl transferase family 4 J5N61_15325 PF01225 Mur ligase family, catalytic domain J5N61_15325 PF02875 Mur ligase family, glutamate ligase domain J5N61_15325 PF08245 Mur ligase middle domain J5N61_15330 PF08245 Mur ligase middle domain J5N61_15330 PF02875 Mur ligase family, glutamate ligase domain J5N61_15330 PF01225 Mur ligase family, catalytic domain J5N61_15335 PF00905 Penicillin binding protein transpeptidase domain J5N61_15335 PF03717 Penicillin-binding Protein dimerisation domain J5N61_15345 PF01795 MraW methylase family J5N61_15360 PF00749 tRNA synthetases class I (E and Q), catalytic domain J5N61_15375 PF00324 Amino acid permease J5N61_15405 PF01545 Cation efflux family J5N61_15410 PF00873 AcrB/AcrD/AcrF family J5N61_15415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5N61_15415 PF00529 HlyD membrane-fusion protein of T1SS J5N61_15430 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_15435 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family J5N61_15445 PF12848 ABC transporter J5N61_15445 PF00005 ABC transporter J5N61_15450 PF01053 Cys/Met metabolism PLP-dependent enzyme J5N61_15455 PF00106 short chain dehydrogenase J5N61_15460 PF00550 Phosphopantetheine attachment site J5N61_15460 PF07993 Male sterility protein J5N61_15465 PF13411 MerR HTH family regulatory protein J5N61_15470 PF00083 Sugar (and other) transporter J5N61_15495 PF17674 HHH domain J5N61_15495 PF00575 S1 RNA binding domain J5N61_15495 PF09371 Tex-like protein N-terminal domain J5N61_15495 PF16921 Tex protein YqgF-like domain J5N61_15500 PF00072 Response regulator receiver domain J5N61_15500 PF00486 Transcriptional regulatory protein, C terminal J5N61_15505 PF00672 HAMP domain J5N61_15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_15505 PF00512 His Kinase A (phospho-acceptor) domain J5N61_15510 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J5N61_15510 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J5N61_15535 PF00475 Imidazoleglycerol-phosphate dehydratase J5N61_15540 PF00117 Glutamine amidotransferase class-I J5N61_15555 PF00977 Histidine biosynthesis protein J5N61_15560 PF01740 STAS domain J5N61_15560 PF00916 Sulfate permease family J5N61_15565 PF01381 Helix-turn-helix J5N61_15575 PF03992 Antibiotic biosynthesis monooxygenase J5N61_15600 PF01636 Phosphotransferase enzyme family J5N61_15605 PF00977 Histidine biosynthesis protein J5N61_15640 PF02705 K+ potassium transporter J5N61_15745 PF02463 RecF/RecN/SMC N terminal domain J5N61_15760 PF01593 Flavin containing amine oxidoreductase J5N61_15765 PF02678 Pirin J5N61_15765 PF05726 Pirin C-terminal cupin domain J5N61_15770 PF00857 Isochorismatase family J5N61_15775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_15780 PF00171 Aldehyde dehydrogenase family J5N61_15785 PF00202 Aminotransferase class-III J5N61_15790 PF00392 Bacterial regulatory proteins, gntR family J5N61_15790 PF00155 Aminotransferase class I and II J5N61_15800 PF00436 Single-strand binding protein family J5N61_15805 PF07690 Major Facilitator Superfamily J5N61_15820 PF03070 TENA/THI-4/PQQC family J5N61_15830 PF16197 Ketoacyl-synthetase C-terminal extension J5N61_15830 PF14765 Polyketide synthase dehydratase J5N61_15830 PF08240 Alcohol dehydrogenase GroES-like domain J5N61_15830 PF00107 Zinc-binding dehydrogenase J5N61_15830 PF00109 Beta-ketoacyl synthase, N-terminal domain J5N61_15830 PF08659 KR domain J5N61_15830 PF00550 Phosphopantetheine attachment site J5N61_15830 PF02801 Beta-ketoacyl synthase, C-terminal domain J5N61_15830 PF00698 Acyl transferase domain J5N61_15835 PF00440 Bacterial regulatory proteins, tetR family J5N61_15835 PF16925 Tetracyclin repressor-like, C-terminal domain J5N61_15840 PF17755 UvrA DNA-binding domain J5N61_15840 PF17760 UvrA interaction domain J5N61_15850 PF00990 Diguanylate cyclase, GGDEF domain J5N61_15860 PF00196 Bacterial regulatory proteins, luxR family J5N61_15860 PF00072 Response regulator receiver domain J5N61_15865 PF03358 NADPH-dependent FMN reductase J5N61_15870 PF00296 Luciferase-like monooxygenase J5N61_15880 PF00857 Isochorismatase family J5N61_15885 PF00501 AMP-binding enzyme J5N61_15885 PF13193 AMP-binding enzyme C-terminal domain J5N61_15885 PF16177 Acetyl-coenzyme A synthetase N-terminus J5N61_15895 PF00924 Mechanosensitive ion channel J5N61_15900 PF04452 RNA methyltransferase J5N61_15905 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J5N61_15910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J5N61_15940 PF17768 RecJ OB domain J5N61_15940 PF02272 DHHA1 domain J5N61_15940 PF01368 DHH family J5N61_15945 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J5N61_15945 PF01243 Pyridoxamine 5'-phosphate oxidase J5N61_15950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J5N61_15950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J5N61_15950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J5N61_15950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J5N61_15955 PF00571 CBS domain J5N61_15955 PF00478 IMP dehydrogenase / GMP reductase domain J5N61_15960 PF03692 Putative zinc- or iron-chelating domain J5N61_15965 PF00258 Flavodoxin J5N61_15965 PF01613 Flavin reductase like domain J5N61_15970 PF00593 TonB dependent receptor J5N61_15970 PF07715 TonB-dependent Receptor Plug Domain J5N61_15975 PF01169 Uncharacterized protein family UPF0016 J5N61_15985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J5N61_15985 PF00364 Biotin-requiring enzyme J5N61_15985 PF02817 e3 binding domain J5N61_15990 PF17831 Pyruvate dehydrogenase E1 component middle domain J5N61_15990 PF00456 Transketolase, thiamine diphosphate binding domain J5N61_16005 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J5N61_16010 PF12327 FtsZ family, C-terminal domain J5N61_16010 PF00091 Tubulin/FtsZ family, GTPase domain J5N61_16015 PF02491 SHS2 domain inserted in FTSA J5N61_16020 PF08478 POTRA domain, FtsQ-type J5N61_16020 PF03799 Cell division protein FtsQ J5N61_16025 PF01820 D-ala D-ala ligase N-terminus J5N61_16025 PF07478 D-ala D-ala ligase C-terminus J5N61_16030 PF01225 Mur ligase family, catalytic domain J5N61_16030 PF02875 Mur ligase family, glutamate ligase domain J5N61_16030 PF08245 Mur ligase middle domain J5N61_16035 PF03033 Glycosyltransferase family 28 N-terminal domain J5N61_16035 PF04101 Glycosyltransferase family 28 C-terminal domain J5N61_16040 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J5N61_16040 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J5N61_16045 PF00255 Glutathione peroxidase J5N61_16050 PF01047 MarR family J5N61_16060 PF00313 'Cold-shock' DNA-binding domain J5N61_16075 PF00156 Phosphoribosyl transferase domain J5N61_16080 PF03372 Endonuclease/Exonuclease/phosphatase family J5N61_16085 PF03960 ArsC family J5N61_16095 PF07859 alpha/beta hydrolase fold J5N61_16100 PF13340 Putative transposase of IS4/5 family (DUF4096) J5N61_16105 PF17151 Periplasmic sensor domain J5N61_16105 PF00990 Diguanylate cyclase, GGDEF domain J5N61_16115 PF02683 Cytochrome C biogenesis protein transmembrane region J5N61_16115 PF11412 Disulphide bond corrector protein DsbC J5N61_16140 PF00583 Acetyltransferase (GNAT) family J5N61_16150 PF00005 ABC transporter J5N61_16155 PF00005 ABC transporter J5N61_16155 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5N61_16165 PF02653 Branched-chain amino acid transport system / permease component J5N61_16175 PF01554 MatE J5N61_16180 PF00204 DNA gyrase B J5N61_16180 PF00986 DNA gyrase B subunit, carboxyl terminus J5N61_16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_16180 PF01751 Toprim domain J5N61_16185 PF05728 Uncharacterised protein family (UPF0227) J5N61_16220 PF00665 Integrase core domain J5N61_16220 PF13936 Helix-turn-helix domain J5N61_16225 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) J5N61_16225 PF13296 Putative type VI secretion system Rhs element Vgr J5N61_16225 PF04717 Type VI secretion system, phage-baseplate injector J5N61_16230 PF02600 Disulfide bond formation protein DsbB J5N61_16235 PF04262 Glutamate-cysteine ligase J5N61_16250 PF04286 Protein of unknown function (DUF445) J5N61_16260 PF00155 Aminotransferase class I and II J5N61_16265 PF01554 MatE J5N61_16270 PF00106 short chain dehydrogenase J5N61_16280 PF00072 Response regulator receiver domain J5N61_16280 PF00486 Transcriptional regulatory protein, C terminal J5N61_16285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_16285 PF00512 His Kinase A (phospho-acceptor) domain J5N61_16285 PF00989 PAS fold J5N61_16285 PF11808 Phosphate regulon sensor protein PhoR J5N61_16300 PF03466 LysR substrate binding domain J5N61_16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_16320 PF02666 Phosphatidylserine decarboxylase J5N61_16325 PF00581 Rhodanese-like domain J5N61_16330 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J5N61_16330 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J5N61_16335 PF02580 D-Tyr-tRNA(Tyr) deacylase J5N61_16360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J5N61_16360 PF00925 GTP cyclohydrolase II J5N61_16365 PF00885 6,7-dimethyl-8-ribityllumazine synthase J5N61_16370 PF01029 NusB family J5N61_16375 PF02769 AIR synthase related protein, C-terminal domain J5N61_16375 PF00586 AIR synthase related protein, N-terminal domain J5N61_16380 PF04608 Phosphatidylglycerophosphatase A J5N61_16385 PF14602 Hexapeptide repeat of succinyl-transferase J5N61_16385 PF12804 MobA-like NTP transferase domain J5N61_16385 PF00132 Bacterial transferase hexapeptide (six repeats) J5N61_16390 PF01380 SIS domain J5N61_16395 PF08721 TnsA endonuclease C terminal J5N61_16395 PF08722 TnsA endonuclease N terminal J5N61_16400 PF00665 Integrase core domain J5N61_16405 PF11426 Tn7 transposition regulator TnsC J5N61_16405 PF13401 AAA domain J5N61_16410 PF06527 TniQ J5N61_16410 PF15978 Tn7-like transposition protein D J5N61_16420 PF13756 Stimulus-sensing domain J5N61_16420 PF00672 HAMP domain J5N61_16420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5N61_16420 PF00512 His Kinase A (phospho-acceptor) domain J5N61_16420 PF13755 Sensor N-terminal transmembrane domain J5N61_16430 PF00145 C-5 cytosine-specific DNA methylase J5N61_16435 PF01381 Helix-turn-helix J5N61_16460 PF00857 Isochorismatase family J5N61_16465 PF00701 Dihydrodipicolinate synthetase family J5N61_16475 PF01259 SAICAR synthetase J5N61_16485 PF00892 EamA-like transporter family J5N61_16490 PF12002 MgsA AAA+ ATPase C terminal J5N61_16490 PF16193 AAA C-terminal domain J5N61_16490 PF00004 ATPase family associated with various cellular activities (AAA) J5N61_16495 PF00144 Beta-lactamase J5N61_16500 PF07995 Glucose / Sorbosone dehydrogenase J5N61_16505 PF03692 Putative zinc- or iron-chelating domain J5N61_16510 PF07043 Protein of unknown function (DUF1328) J5N61_16520 PF00633 Helix-hairpin-helix motif J5N61_16520 PF14815 NUDIX domain J5N61_16520 PF00730 HhH-GPD superfamily base excision DNA repair protein J5N61_16525 PF01551 Peptidase family M23 J5N61_16535 PF03352 Methyladenine glycosylase J5N61_16540 PF08240 Alcohol dehydrogenase GroES-like domain J5N61_16540 PF00107 Zinc-binding dehydrogenase J5N61_16545 PF00392 Bacterial regulatory proteins, gntR family J5N61_16545 PF00155 Aminotransferase class I and II J5N61_16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_16555 PF03466 LysR substrate binding domain J5N61_16560 PF00248 Aldo/keto reductase family J5N61_16565 PF07690 Major Facilitator Superfamily J5N61_16575 PF05173 Dihydrodipicolinate reductase, C-terminus J5N61_16575 PF01113 Dihydrodipicolinate reductase, N-terminus J5N61_16580 PF00684 DnaJ central domain J5N61_16580 PF01556 DnaJ C terminal domain J5N61_16580 PF00226 DnaJ domain J5N61_16590 PF00873 AcrB/AcrD/AcrF family J5N61_16595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5N61_16600 PF00440 Bacterial regulatory proteins, tetR family J5N61_16605 PF00311 Phosphoenolpyruvate carboxylase J5N61_16610 PF00860 Permease family J5N61_16630 PF00920 Dehydratase family J5N61_16635 PF02911 Formyl transferase, C-terminal domain J5N61_16635 PF00551 Formyl transferase J5N61_16640 PF01189 16S rRNA methyltransferase RsmB/F J5N61_16640 PF01029 NusB family J5N61_16655 PF00209 Sodium:neurotransmitter symporter family J5N61_16660 PF00171 Aldehyde dehydrogenase family J5N61_16705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J5N61_16710 PF07859 alpha/beta hydrolase fold J5N61_16730 PF01025 GrpE J5N61_16735 PF00012 Hsp70 protein J5N61_16740 PF12706 Beta-lactamase superfamily domain J5N61_16765 PF13406 Transglycosylase SLT domain J5N61_16770 PF02222 ATP-grasp domain J5N61_16770 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J5N61_16775 PF00731 AIR carboxylase J5N61_16785 PF01225 Mur ligase family, catalytic domain J5N61_16785 PF02875 Mur ligase family, glutamate ligase domain J5N61_16785 PF08245 Mur ligase middle domain J5N61_16790 PF00106 short chain dehydrogenase J5N61_16805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5N61_16805 PF02770 Acyl-CoA dehydrogenase, middle domain J5N61_16805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5N61_16810 PF03466 LysR substrate binding domain J5N61_16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5N61_16820 PF03741 Integral membrane protein TerC family J5N61_16830 PF03738 Glutathionylspermidine synthase preATP-grasp J5N61_16840 PF01979 Amidohydrolase family J5N61_16845 PF00156 Phosphoribosyl transferase domain J5N61_16855 PF13098 Thioredoxin-like domain J5N61_16855 PF10411 Disulfide bond isomerase protein N-terminus J5N61_16860 PF00437 Type II/IV secretion system protein J5N61_16865 PF01926 50S ribosome-binding GTPase J5N61_16865 PF12631 MnmE helical domain J5N61_16865 PF10396 GTP-binding protein TrmE N-terminus J5N61_16870 PF02096 60Kd inner membrane protein J5N61_16870 PF14849 YidC periplasmic domain J5N61_16875 PF01809 Putative membrane protein insertion efficiency factor J5N61_16880 PF00825 Ribonuclease P J5N61_16885 PF00468 Ribosomal protein L34