locus-tag class description CS557_00005 PF00308 Bacterial dnaA protein CS557_00005 PF08299 Bacterial dnaA protein helix-turn-helix CS557_00005 PF11638 DnaA N-terminal domain CS557_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CS557_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CS557_00010 PF02767 DNA polymerase III beta subunit, central domain CS557_00015 PF02463 RecF/RecN/SMC N terminal domain CS557_00020 PF00204 DNA gyrase B CS557_00020 PF00986 DNA gyrase B subunit, carboxyl terminus CS557_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_00020 PF01751 Toprim domain CS557_00020 PF18053 DNA gyrase B subunit insert domain CS557_00030 PF09335 SNARE associated Golgi protein CS557_00035 PF00005 ABC transporter CS557_00035 PF12848 ABC transporter CS557_00065 PF01521 Iron-sulphur cluster biosynthesis CS557_00070 PF03702 Anhydro-N-acetylmuramic acid kinase CS557_00075 PF00579 tRNA synthetases class I (W and Y) CS557_00120 PF00171 Aldehyde dehydrogenase family CS557_00125 PF00209 Sodium:neurotransmitter symporter family CS557_00135 PF01029 NusB family CS557_00135 PF01189 16S rRNA methyltransferase RsmB/F CS557_00140 PF02911 Formyl transferase, C-terminal domain CS557_00140 PF00551 Formyl transferase CS557_00145 PF00920 Dehydratase family CS557_00160 PF03466 LysR substrate binding domain CS557_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_00170 PF00860 Permease family CS557_00175 PF00311 Phosphoenolpyruvate carboxylase CS557_00180 PF00440 Bacterial regulatory proteins, tetR family CS557_00185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CS557_00190 PF00873 AcrB/AcrD/AcrF family CS557_00200 PF00226 DnaJ domain CS557_00200 PF01556 DnaJ C terminal domain CS557_00200 PF00684 DnaJ central domain CS557_00205 PF01113 Dihydrodipicolinate reductase, N-terminus CS557_00205 PF05173 Dihydrodipicolinate reductase, C-terminus CS557_00215 PF07690 Major Facilitator Superfamily CS557_00220 PF00248 Aldo/keto reductase family CS557_00225 PF03466 LysR substrate binding domain CS557_00225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_00235 PF00155 Aminotransferase class I and II CS557_00235 PF00392 Bacterial regulatory proteins, gntR family CS557_00240 PF00107 Zinc-binding dehydrogenase CS557_00240 PF08240 Alcohol dehydrogenase GroES-like domain CS557_00245 PF03352 Methyladenine glycosylase CS557_00255 PF01551 Peptidase family M23 CS557_00260 PF14815 NUDIX domain CS557_00260 PF00633 Helix-hairpin-helix motif CS557_00260 PF00730 HhH-GPD superfamily base excision DNA repair protein CS557_00270 PF07043 Protein of unknown function (DUF1328) CS557_00275 PF03692 Putative zinc- or iron-chelating domain CS557_00280 PF07995 Glucose / Sorbosone dehydrogenase CS557_00285 PF00144 Beta-lactamase CS557_00290 PF12002 MgsA AAA+ ATPase C terminal CS557_00290 PF16193 AAA C-terminal domain CS557_00290 PF00004 ATPase family associated with various cellular activities (AAA) CS557_00295 PF00892 EamA-like transporter family CS557_00305 PF01259 SAICAR synthetase CS557_00315 PF00701 Dihydrodipicolinate synthetase family CS557_00320 PF00857 Isochorismatase family CS557_00335 PF01380 SIS domain CS557_00340 PF12804 MobA-like NTP transferase domain CS557_00340 PF14602 Hexapeptide repeat of succinyl-transferase CS557_00340 PF00132 Bacterial transferase hexapeptide (six repeats) CS557_00345 PF04608 Phosphatidylglycerophosphatase A CS557_00350 PF02769 AIR synthase related protein, C-terminal domain CS557_00350 PF00586 AIR synthase related protein, N-terminal domain CS557_00355 PF01029 NusB family CS557_00360 PF00885 6,7-dimethyl-8-ribityllumazine synthase CS557_00365 PF00925 GTP cyclohydrolase II CS557_00365 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CS557_00390 PF02580 D-Tyr-tRNA(Tyr) deacylase CS557_00395 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CS557_00395 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CS557_00405 PF00581 Rhodanese-like domain CS557_00410 PF02666 Phosphatidylserine decarboxylase CS557_00425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_00425 PF03466 LysR substrate binding domain CS557_00440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_00440 PF11808 Phosphate regulon sensor protein PhoR CS557_00440 PF00989 PAS fold CS557_00440 PF00512 His Kinase A (phospho-acceptor) domain CS557_00445 PF00072 Response regulator receiver domain CS557_00445 PF00486 Transcriptional regulatory protein, C terminal CS557_00455 PF00106 short chain dehydrogenase CS557_00460 PF01554 MatE CS557_00465 PF00155 Aminotransferase class I and II CS557_00475 PF04286 Protein of unknown function (DUF445) CS557_00490 PF04262 Glutamate-cysteine ligase CS557_00495 PF02600 Disulfide bond formation protein DsbB CS557_00500 PF04717 Type VI secretion system, phage-baseplate injector CS557_00500 PF16671 Actin cross-linking domain CS557_00540 PF05728 Uncharacterised protein family (UPF0227) CS557_00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_00545 PF01751 Toprim domain CS557_00545 PF00204 DNA gyrase B CS557_00545 PF00986 DNA gyrase B subunit, carboxyl terminus CS557_00550 PF01554 MatE CS557_00560 PF02653 Branched-chain amino acid transport system / permease component CS557_00570 PF12399 Branched-chain amino acid ATP-binding cassette transporter CS557_00570 PF00005 ABC transporter CS557_00575 PF00005 ABC transporter CS557_00585 PF00583 Acetyltransferase (GNAT) family CS557_00610 PF02683 Cytochrome C biogenesis protein transmembrane region CS557_00610 PF11412 Disulphide bond corrector protein DsbC CS557_00620 PF00990 Diguanylate cyclase, GGDEF domain CS557_00620 PF17151 Periplasmic sensor domain CS557_00625 PF07859 alpha/beta hydrolase fold CS557_00635 PF03960 ArsC family CS557_00640 PF03372 Endonuclease/Exonuclease/phosphatase family CS557_00645 PF00156 Phosphoribosyl transferase domain CS557_00660 PF00313 'Cold-shock' DNA-binding domain CS557_00670 PF01047 MarR family CS557_00675 PF00255 Glutathione peroxidase CS557_00680 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CS557_00680 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CS557_00685 PF03033 Glycosyltransferase family 28 N-terminal domain CS557_00685 PF04101 Glycosyltransferase family 28 C-terminal domain CS557_00690 PF01225 Mur ligase family, catalytic domain CS557_00690 PF02875 Mur ligase family, glutamate ligase domain CS557_00690 PF08245 Mur ligase middle domain CS557_00695 PF07478 D-ala D-ala ligase C-terminus CS557_00695 PF01820 D-ala D-ala ligase N-terminus CS557_00700 PF03799 Cell division protein FtsQ CS557_00700 PF08478 POTRA domain, FtsQ-type CS557_00705 PF02491 SHS2 domain inserted in FTSA CS557_00710 PF12327 FtsZ family, C-terminal domain CS557_00710 PF00091 Tubulin/FtsZ family, GTPase domain CS557_00715 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CS557_00730 PF17831 Pyruvate dehydrogenase E1 component middle domain CS557_00730 PF00456 Transketolase, thiamine diphosphate binding domain CS557_00735 PF02817 e3 binding domain CS557_00735 PF00364 Biotin-requiring enzyme CS557_00735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CS557_00750 PF01169 Uncharacterized protein family UPF0016 CS557_00755 PF07715 TonB-dependent Receptor Plug Domain CS557_00755 PF00593 TonB dependent receptor CS557_00760 PF00258 Flavodoxin CS557_00760 PF01613 Flavin reductase like domain CS557_00765 PF03692 Putative zinc- or iron-chelating domain CS557_00770 PF00571 CBS domain CS557_00770 PF00478 IMP dehydrogenase / GMP reductase domain CS557_00775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CS557_00775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CS557_00775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CS557_00775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CS557_00780 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CS557_00780 PF01243 Pyridoxamine 5'-phosphate oxidase CS557_00785 PF02272 DHHA1 domain CS557_00785 PF17768 RecJ OB domain CS557_00785 PF01368 DHH family CS557_00810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CS557_00815 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CS557_00820 PF04452 RNA methyltransferase CS557_00825 PF00924 Mechanosensitive ion channel CS557_00835 PF13193 AMP-binding enzyme C-terminal domain CS557_00835 PF16177 Acetyl-coenzyme A synthetase N-terminus CS557_00835 PF00501 AMP-binding enzyme CS557_00840 PF00857 Isochorismatase family CS557_00850 PF00296 Luciferase-like monooxygenase CS557_00855 PF03358 NADPH-dependent FMN reductase CS557_00860 PF00072 Response regulator receiver domain CS557_00860 PF00196 Bacterial regulatory proteins, luxR family CS557_00870 PF00990 Diguanylate cyclase, GGDEF domain CS557_00875 PF17755 UvrA DNA-binding domain CS557_00875 PF17760 UvrA interaction domain CS557_00880 PF00440 Bacterial regulatory proteins, tetR family CS557_00880 PF16925 Tetracyclin repressor-like, C-terminal domain CS557_00885 PF00550 Phosphopantetheine attachment site CS557_00885 PF08659 KR domain CS557_00885 PF02801 Beta-ketoacyl synthase, C-terminal domain CS557_00885 PF08240 Alcohol dehydrogenase GroES-like domain CS557_00885 PF00107 Zinc-binding dehydrogenase CS557_00885 PF16197 Ketoacyl-synthetase C-terminal extension CS557_00885 PF14765 Polyketide synthase dehydratase CS557_00885 PF00698 Acyl transferase domain CS557_00885 PF00109 Beta-ketoacyl synthase, N-terminal domain CS557_00895 PF03070 TENA/THI-4/PQQC family CS557_00905 PF07690 Major Facilitator Superfamily CS557_00910 PF00436 Single-strand binding protein family CS557_00920 PF00324 Amino acid permease CS557_00925 PF00155 Aminotransferase class I and II CS557_00925 PF00392 Bacterial regulatory proteins, gntR family CS557_00930 PF00202 Aminotransferase class-III CS557_00935 PF00171 Aldehyde dehydrogenase family CS557_00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_00945 PF00857 Isochorismatase family CS557_00950 PF02678 Pirin CS557_00950 PF05726 Pirin C-terminal cupin domain CS557_00955 PF01593 Flavin containing amine oxidoreductase CS557_00980 PF07693 KAP family P-loop domain CS557_01095 PF00069 Protein kinase domain CS557_01095 PF03793 PASTA domain CS557_01100 PF13356 Arm DNA-binding domain CS557_01100 PF00589 Phage integrase family CS557_01175 PF00772 DnaB-like helicase N terminal domain CS557_01175 PF03796 DnaB-like helicase C terminal domain CS557_01210 PF13356 Arm DNA-binding domain CS557_01210 PF00589 Phage integrase family CS557_01220 PF02705 K+ potassium transporter CS557_01235 PF00230 Major intrinsic protein CS557_01250 PF00977 Histidine biosynthesis protein CS557_01255 PF01636 Phosphotransferase enzyme family CS557_01275 PF03992 Antibiotic biosynthesis monooxygenase CS557_01285 PF08671 Anti-repressor SinI CS557_01285 PF01381 Helix-turn-helix CS557_01290 PF00916 Sulfate permease family CS557_01290 PF01740 STAS domain CS557_01295 PF00977 Histidine biosynthesis protein CS557_01310 PF00117 Glutamine amidotransferase class-I CS557_01315 PF00475 Imidazoleglycerol-phosphate dehydratase CS557_01340 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CS557_01340 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CS557_01345 PF00512 His Kinase A (phospho-acceptor) domain CS557_01345 PF00672 HAMP domain CS557_01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_01350 PF00486 Transcriptional regulatory protein, C terminal CS557_01350 PF00072 Response regulator receiver domain CS557_01355 PF16921 Tex protein YqgF-like domain CS557_01355 PF09371 Tex-like protein N-terminal domain CS557_01355 PF00575 S1 RNA binding domain CS557_01355 PF17674 HHH domain CS557_01380 PF00083 Sugar (and other) transporter CS557_01385 PF13411 MerR HTH family regulatory protein CS557_01390 PF00550 Phosphopantetheine attachment site CS557_01390 PF07993 Male sterility protein CS557_01395 PF00106 short chain dehydrogenase CS557_01400 PF01053 Cys/Met metabolism PLP-dependent enzyme CS557_01405 PF12848 ABC transporter CS557_01405 PF00005 ABC transporter CS557_01440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CS557_01440 PF00529 HlyD membrane-fusion protein of T1SS CS557_01445 PF00873 AcrB/AcrD/AcrF family CS557_01450 PF01545 Cation efflux family CS557_01480 PF00324 Amino acid permease CS557_01495 PF00749 tRNA synthetases class I (E and Q), catalytic domain CS557_01510 PF01795 MraW methylase family CS557_01520 PF03717 Penicillin-binding Protein dimerisation domain CS557_01520 PF00905 Penicillin binding protein transpeptidase domain CS557_01525 PF01225 Mur ligase family, catalytic domain CS557_01525 PF08245 Mur ligase middle domain CS557_01525 PF02875 Mur ligase family, glutamate ligase domain CS557_01530 PF02875 Mur ligase family, glutamate ligase domain CS557_01530 PF01225 Mur ligase family, catalytic domain CS557_01530 PF08245 Mur ligase middle domain CS557_01535 PF00953 Glycosyl transferase family 4 CS557_01540 PF13847 Methyltransferase domain CS557_01545 PF00905 Penicillin binding protein transpeptidase domain CS557_01545 PF00912 Transglycosylase CS557_01545 PF17092 Penicillin-binding protein OB-like domain CS557_01570 PF03958 Bacterial type II/III secretion system short domain CS557_01570 PF00263 Bacterial type II and III secretion system protein CS557_01570 PF11741 AMIN domain CS557_01570 PF07660 Secretin and TonB N terminus short domain CS557_01575 PF01202 Shikimate kinase CS557_01580 PF01761 3-dehydroquinate synthase CS557_01590 PF04898 Glutamate synthase central domain CS557_01590 PF01493 GXGXG motif CS557_01590 PF01645 Conserved region in glutamate synthase CS557_01590 PF00310 Glutamine amidotransferases class-II CS557_01595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CS557_01595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_01605 PF04011 LemA family CS557_01610 PF04536 TPM domain CS557_01620 PF07963 Prokaryotic N-terminal methylation motif CS557_01620 PF00114 Pilin (bacterial filament) CS557_01625 PF00114 Pilin (bacterial filament) CS557_01625 PF07963 Prokaryotic N-terminal methylation motif CS557_01630 PF04932 O-Antigen ligase CS557_01640 PF11846 Virulence factor membrane-bound polymerase, C-terminal CS557_01640 PF04932 O-Antigen ligase CS557_01640 PF15864 Protein glycosylation ligase CS557_01645 PF00210 Ferritin-like domain CS557_01650 PF04324 BFD-like [2Fe-2S] binding domain CS557_01655 PF01042 Endoribonuclease L-PSP CS557_01660 PF13291 ACT domain CS557_01660 PF04607 Region found in RelA / SpoT proteins CS557_01660 PF02824 TGS domain CS557_01665 PF01192 RNA polymerase Rpb6 CS557_01670 PF00625 Guanylate kinase CS557_01675 PF02401 LytB protein CS557_01680 PF07963 Prokaryotic N-terminal methylation motif CS557_01680 PF00114 Pilin (bacterial filament) CS557_01710 PF00114 Pilin (bacterial filament) CS557_01710 PF07963 Prokaryotic N-terminal methylation motif CS557_01715 PF00886 Ribosomal protein S16 CS557_01720 PF01782 RimM N-terminal domain CS557_01720 PF05239 PRC-barrel domain CS557_01725 PF01746 tRNA (Guanine-1)-methyltransferase CS557_01730 PF01245 Ribosomal protein L19 CS557_01735 PF00561 alpha/beta hydrolase fold CS557_01740 PF03280 Proteobacterial lipase chaperone protein CS557_01745 PF16198 tRNA pseudouridylate synthase B C-terminal domain CS557_01745 PF09157 Pseudouridine synthase II TruB, C-terminal CS557_01745 PF01509 TruB family pseudouridylate synthase (N terminal domain) CS557_01750 PF01925 Sulfite exporter TauE/SafE CS557_01760 PF00892 EamA-like transporter family CS557_01765 PF00892 EamA-like transporter family CS557_01770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS557_01770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CS557_01775 PF01565 FAD binding domain CS557_01775 PF02913 FAD linked oxidases, C-terminal domain CS557_01795 PF03992 Antibiotic biosynthesis monooxygenase CS557_01800 PF02525 Flavodoxin-like fold CS557_01815 PF07690 Major Facilitator Superfamily CS557_01820 PF12805 FUSC-like inner membrane protein yccS CS557_01825 PF00080 Copper/zinc superoxide dismutase (SODC) CS557_01830 PF01594 AI-2E family transporter CS557_01835 PF13614 AAA domain CS557_01845 PF01209 ubiE/COQ5 methyltransferase family CS557_01860 PF01938 TRAM domain CS557_01860 PF05958 tRNA (Uracil-5-)-methyltransferase CS557_01880 PF00082 Subtilase family CS557_01890 PF00743 Flavin-binding monooxygenase-like CS557_01905 PF05746 DALR anticodon binding domain CS557_01905 PF02092 Glycyl-tRNA synthetase beta subunit CS557_01910 PF02091 Glycyl-tRNA synthetase alpha subunit CS557_01925 PF00939 Sodium:sulfate symporter transmembrane region CS557_01940 PF04024 PspC domain CS557_01950 PF12806 Acetyl-CoA dehydrogenase C-terminal like CS557_01950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_01950 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_01950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_01960 PF08501 Shikimate dehydrogenase substrate binding domain CS557_01960 PF01488 Shikimate / quinate 5-dehydrogenase CS557_01960 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CS557_01970 PF00925 GTP cyclohydrolase II CS557_01975 PF02780 Transketolase, C-terminal domain CS557_01975 PF02779 Transketolase, pyrimidine binding domain CS557_01975 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CS557_01980 PF00459 Inositol monophosphatase family CS557_01985 PF03880 DbpA RNA binding domain CS557_01985 PF00270 DEAD/DEAH box helicase CS557_01985 PF12343 Cold shock protein DEAD box A CS557_01985 PF00271 Helicase conserved C-terminal domain CS557_01995 PF00005 ABC transporter CS557_02000 PF02405 Permease MlaE CS557_02005 PF02470 MlaD protein CS557_02010 PF05494 MlaC protein CS557_02025 PF01544 CorA-like Mg2+ transporter protein CS557_02030 PF03641 Possible lysine decarboxylase CS557_02040 PF00156 Phosphoribosyl transferase domain CS557_02045 PF17191 RecG wedge domain CS557_02045 PF00271 Helicase conserved C-terminal domain CS557_02045 PF00270 DEAD/DEAH box helicase CS557_02060 PF01553 Acyltransferase CS557_02070 PF00375 Sodium:dicarboxylate symporter family CS557_02080 PF01926 50S ribosome-binding GTPase CS557_02085 PF02082 Transcriptional regulator CS557_02090 PF00175 Oxidoreductase NAD-binding domain CS557_02090 PF00970 Oxidoreductase FAD-binding domain CS557_02090 PF00042 Globin CS557_02095 PF05872 Bacterial protein of unknown function (DUF853) CS557_02100 PF01053 Cys/Met metabolism PLP-dependent enzyme CS557_02105 PF00117 Glutamine amidotransferase class-I CS557_02110 PF00338 Ribosomal protein S10p/S20e CS557_02115 PF00297 Ribosomal protein L3 CS557_02120 PF00573 Ribosomal protein L4/L1 family CS557_02125 PF00276 Ribosomal protein L23 CS557_02130 PF00181 Ribosomal Proteins L2, RNA binding domain CS557_02130 PF03947 Ribosomal Proteins L2, C-terminal domain CS557_02135 PF00203 Ribosomal protein S19 CS557_02140 PF00237 Ribosomal protein L22p/L17e CS557_02145 PF07650 KH domain CS557_02145 PF00189 Ribosomal protein S3, C-terminal domain CS557_02150 PF00252 Ribosomal protein L16p/L10e CS557_02155 PF00831 Ribosomal L29 protein CS557_02160 PF00366 Ribosomal protein S17 CS557_02165 PF00238 Ribosomal protein L14p/L23e CS557_02170 PF00467 KOW motif CS557_02170 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CS557_02175 PF00673 ribosomal L5P family C-terminus CS557_02175 PF00281 Ribosomal protein L5 CS557_02180 PF00253 Ribosomal protein S14p/S29e CS557_02185 PF00410 Ribosomal protein S8 CS557_02190 PF00347 Ribosomal protein L6 CS557_02195 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CS557_02200 PF03719 Ribosomal protein S5, C-terminal domain CS557_02200 PF00333 Ribosomal protein S5, N-terminal domain CS557_02205 PF00327 Ribosomal protein L30p/L7e CS557_02210 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CS557_02215 PF00344 SecY translocase CS557_02220 PF00444 Ribosomal protein L36 CS557_02225 PF00416 Ribosomal protein S13/S18 CS557_02230 PF00411 Ribosomal protein S11 CS557_02235 PF01479 S4 domain CS557_02235 PF00163 Ribosomal protein S4/S9 N-terminal domain CS557_02240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CS557_02240 PF01000 RNA polymerase Rpb3/RpoA insert domain CS557_02240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CS557_02245 PF01196 Ribosomal protein L17 CS557_02255 PF00743 Flavin-binding monooxygenase-like CS557_02265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_02265 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_02265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_02270 PF03937 Flavinator of succinate dehydrogenase CS557_02310 PF00892 EamA-like transporter family CS557_02325 PF01432 Peptidase family M3 CS557_02335 PF00773 RNB domain CS557_02335 PF00575 S1 RNA binding domain CS557_02335 PF08461 Ribonuclease R winged-helix domain CS557_02335 PF17876 Cold shock domain CS557_02335 PF08206 Ribonuclease B OB domain CS557_02370 PF01557 Fumarylacetoacetate (FAA) hydrolase family CS557_02390 PF03631 Virulence factor BrkB CS557_02395 PF03358 NADPH-dependent FMN reductase CS557_02400 PF01790 Prolipoprotein diacylglyceryl transferase CS557_02415 PF00902 Sec-independent protein translocase protein (TatC) CS557_02420 PF02416 mttA/Hcf106 family CS557_02425 PF02416 mttA/Hcf106 family CS557_02430 PF01725 Ham1 family CS557_02445 PF07021 Methionine biosynthesis protein MetW CS557_02445 PF00561 alpha/beta hydrolase fold CS557_02450 PF00561 alpha/beta hydrolase fold CS557_02455 PF08502 LeuA allosteric (dimerisation) domain CS557_02455 PF00682 HMGL-like CS557_02465 PF13640 2OG-Fe(II) oxygenase superfamily CS557_02465 PF18331 PKHD-type hydroxylase C-terminal domain CS557_02470 PF00593 TonB dependent receptor CS557_02470 PF07715 TonB-dependent Receptor Plug Domain CS557_02475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CS557_02475 PF05698 Bacterial trigger factor protein (TF) C-terminus CS557_02475 PF05697 Bacterial trigger factor protein (TF) CS557_02480 PF00574 Clp protease CS557_02485 PF10431 C-terminal, D2-small domain, of ClpB protein CS557_02485 PF06689 ClpX C4-type zinc finger CS557_02485 PF07724 AAA domain (Cdc48 subfamily) CS557_02500 PF05683 Fumarase C-terminus CS557_02500 PF05681 Fumarate hydratase (Fumerase) CS557_02510 PF00892 EamA-like transporter family CS557_02515 PF07085 DRTGG domain CS557_02515 PF01515 Phosphate acetyl/butaryl transferase CS557_02520 PF00871 Acetokinase family CS557_02525 PF00171 Aldehyde dehydrogenase family CS557_02540 PF00933 Glycosyl hydrolase family 3 N terminal domain CS557_02545 PF03572 Peptidase family S41 CS557_02545 PF00595 PDZ domain CS557_02545 PF11818 C-terminal domain of tail specific protease (DUF3340) CS557_02545 PF17804 Tail specific protease N-terminal domain CS557_02570 PF16360 GTP-binding GTPase Middle Region CS557_02570 PF13167 GTP-binding GTPase N-terminal CS557_02570 PF01926 50S ribosome-binding GTPase CS557_02580 PF13091 PLD-like domain CS557_02585 PF00149 Calcineurin-like phosphoesterase CS557_02585 PF10518 TAT (twin-arginine translocation) pathway signal sequence CS557_02590 PF01389 OmpA-like transmembrane domain CS557_02590 PF00691 OmpA family CS557_02595 PF00990 Diguanylate cyclase, GGDEF domain CS557_02595 PF17152 Periplasmic sensor domain CS557_02635 PF00753 Metallo-beta-lactamase superfamily CS557_02635 PF04273 Putative phosphatase (DUF442) CS557_02640 PF00561 alpha/beta hydrolase fold CS557_02645 PF00085 Thioredoxin CS557_02650 PF03061 Thioesterase superfamily CS557_02655 PF13185 GAF domain CS557_02670 PF04461 Protein of unknown function (DUF520) CS557_02680 PF01266 FAD dependent oxidoreductase CS557_02680 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CS557_02690 PF03795 YCII-related domain CS557_02695 PF04279 Intracellular septation protein A CS557_02700 PF02811 PHP domain CS557_02705 PF01062 Bestrophin, RFP-TM, chloride channel CS557_02710 PF04002 RadC-like JAB domain CS557_02715 PF04127 DNA / pantothenate metabolism flavoprotein CS557_02715 PF02441 Flavoprotein CS557_02725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CS557_02725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CS557_02735 PF02556 Preprotein translocase subunit SecB CS557_02740 PF00462 Glutaredoxin CS557_02750 PF03193 RsgA GTPase CS557_02755 PF00929 Exonuclease CS557_02770 PF03691 Uncharacterised protein family (UPF0167) CS557_02775 PF02321 Outer membrane efflux protein CS557_02780 PF00005 ABC transporter CS557_02780 PF02687 FtsX-like permease family CS557_02780 PF12704 MacB-like periplasmic core domain CS557_02785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CS557_02795 PF06144 DNA polymerase III, delta subunit CS557_02805 PF08264 Anticodon-binding domain of tRNA CS557_02805 PF09334 tRNA synthetases class I (M) CS557_02805 PF13603 Leucyl-tRNA synthetase, Domain 2 CS557_02805 PF00133 tRNA synthetases class I (I, L, M and V) CS557_02815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CS557_02815 PF00205 Thiamine pyrophosphate enzyme, central domain CS557_02815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CS557_02820 PF10369 Small subunit of acetolactate synthase CS557_02825 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CS557_02825 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CS557_02830 PF00990 Diguanylate cyclase, GGDEF domain CS557_02830 PF00563 EAL domain CS557_02830 PF03707 Bacterial signalling protein N terminal repeat CS557_02835 PF00561 alpha/beta hydrolase fold CS557_02840 PF03960 ArsC family CS557_02845 PF01022 Bacterial regulatory protein, arsR family CS557_02855 PF01758 Sodium Bile acid symporter family CS557_02860 PF03358 NADPH-dependent FMN reductase CS557_02875 PF16658 Class II release factor RF3, C-terminal domain CS557_02875 PF03144 Elongation factor Tu domain 2 CS557_02875 PF00009 Elongation factor Tu GTP binding domain CS557_02885 PF01522 Polysaccharide deacetylase CS557_02885 PF13739 Deacetylase PdaC CS557_02885 PF11738 Protein of unknown function (DUF3298) CS557_02890 PF01026 TatD related DNase CS557_02895 PF00330 Aconitase family (aconitate hydratase) CS557_02895 PF00694 Aconitase C-terminal domain CS557_02910 PF00899 ThiF family CS557_02920 PF01207 Dihydrouridine synthase (Dus) CS557_02925 PF07690 Major Facilitator Superfamily CS557_02935 PF09278 MerR, DNA binding CS557_02935 PF00376 MerR family regulatory protein CS557_02940 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CS557_02940 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CS557_02945 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CS557_02950 PF02233 NAD(P) transhydrogenase beta subunit CS557_02955 PF00106 short chain dehydrogenase CS557_02960 PF00909 Ammonium Transporter Family CS557_02960 PF00672 HAMP domain CS557_02975 PF01261 Xylose isomerase-like TIM barrel CS557_02980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CS557_02980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CS557_02985 PF00378 Enoyl-CoA hydratase/isomerase CS557_02990 PF00672 HAMP domain CS557_02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_02990 PF00512 His Kinase A (phospho-acceptor) domain CS557_02990 PF01627 Hpt domain CS557_02990 PF00072 Response regulator receiver domain CS557_02990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CS557_02995 PF00291 Pyridoxal-phosphate dependent enzyme CS557_03005 PF05958 tRNA (Uracil-5-)-methyltransferase CS557_03010 PF02824 TGS domain CS557_03010 PF04607 Region found in RelA / SpoT proteins CS557_03010 PF13291 ACT domain CS557_03020 PF03819 MazG nucleotide pyrophosphohydrolase domain CS557_03030 PF01743 Poly A polymerase head domain CS557_03030 PF12626 Polymerase A arginine-rich C-terminus CS557_03030 PF12627 Probable RNA and SrmB- binding site of polymerase A CS557_03035 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CS557_03040 PF02548 Ketopantoate hydroxymethyltransferase CS557_03045 PF02569 Pantoate-beta-alanine ligase CS557_03050 PF03668 P-loop ATPase protein family CS557_03055 PF00381 PTS HPr component phosphorylation site CS557_03060 PF04751 Protein of unknown function (DUF615) CS557_03065 PF00501 AMP-binding enzyme CS557_03065 PF13193 AMP-binding enzyme C-terminal domain CS557_03075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CS557_03075 PF02824 TGS domain CS557_03075 PF03129 Anticodon binding domain CS557_03075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CS557_03080 PF00707 Translation initiation factor IF-3, C-terminal domain CS557_03080 PF05198 Translation initiation factor IF-3, N-terminal domain CS557_03090 PF00043 Glutathione S-transferase, C-terminal domain CS557_03090 PF02798 Glutathione S-transferase, N-terminal domain CS557_03100 PF09335 SNARE associated Golgi protein CS557_03105 PF07690 Major Facilitator Superfamily CS557_03110 PF01632 Ribosomal protein L35 CS557_03115 PF00453 Ribosomal protein L20 CS557_03130 PF01409 tRNA synthetases class II core domain (F) CS557_03130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CS557_03135 PF03147 Ferredoxin-fold anticodon binding domain CS557_03135 PF01588 Putative tRNA binding domain CS557_03135 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CS557_03135 PF03483 B3/4 domain CS557_03135 PF03484 tRNA synthetase B5 domain CS557_03140 PF00216 Bacterial DNA-binding protein CS557_03150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CS557_03150 PF07497 Rho termination factor, RNA-binding domain CS557_03150 PF07498 Rho termination factor, N-terminal domain CS557_03155 PF00085 Thioredoxin CS557_03160 PF02541 Ppx/GppA phosphatase family CS557_03165 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CS557_03170 PF11734 TilS substrate C-terminal domain CS557_03170 PF09179 TilS substrate binding domain CS557_03170 PF01171 PP-loop family CS557_03175 PF03807 NADP oxidoreductase coenzyme F420-dependent CS557_03175 PF14748 Pyrroline-5-carboxylate reductase dimerisation CS557_03180 PF02325 YGGT family CS557_03185 PF01367 5'-3' exonuclease, C-terminal SAM fold CS557_03185 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CS557_03185 PF00476 DNA polymerase family A CS557_03185 PF01612 3'-5' exonuclease CS557_03205 PF00437 Type II/IV secretion system protein CS557_03210 PF02566 OsmC-like protein CS557_03220 PF00795 Carbon-nitrogen hydrolase CS557_03265 PF00309 Sigma-54 factor, Activator interacting domain (AID) CS557_03265 PF04963 Sigma-54 factor, core binding domain CS557_03265 PF04552 Sigma-54, DNA binding domain CS557_03270 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CS557_03275 PF01722 BolA-like protein CS557_03280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CS557_03285 PF01634 ATP phosphoribosyltransferase CS557_03290 PF00815 Histidinol dehydrogenase CS557_03295 PF00155 Aminotransferase class I and II CS557_03300 PF00425 chorismate binding enzyme CS557_03300 PF04715 Anthranilate synthase component I, N terminal region CS557_03340 PF00293 NUDIX domain CS557_03350 PF00814 Glycoprotease family CS557_03355 PF02673 Bacitracin resistance protein BacA CS557_03360 PF04445 Putative SAM-dependent methyltransferase CS557_03370 PF00756 Putative esterase CS557_03380 PF00834 Ribulose-phosphate 3 epimerase family CS557_03390 PF07731 Multicopper oxidase CS557_03390 PF00394 Multicopper oxidase CS557_03390 PF07732 Multicopper oxidase CS557_03410 PF00893 Small Multidrug Resistance protein CS557_03415 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CS557_03415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CS557_03420 PF01960 ArgJ family CS557_03425 PF02445 Quinolinate synthetase A protein CS557_03455 PF08378 Nuclease-related domain CS557_03460 PF05199 GMC oxidoreductase CS557_03460 PF00732 GMC oxidoreductase CS557_03470 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CS557_03475 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CS557_03475 PF14572 Phosphoribosyl synthetase-associated domain CS557_03480 PF08240 Alcohol dehydrogenase GroES-like domain CS557_03480 PF00107 Zinc-binding dehydrogenase CS557_03490 PF00732 GMC oxidoreductase CS557_03490 PF05199 GMC oxidoreductase CS557_03495 PF00171 Aldehyde dehydrogenase family CS557_03500 PF00440 Bacterial regulatory proteins, tetR family CS557_03500 PF13977 BetI-type transcriptional repressor, C-terminal CS557_03505 PF02028 BCCT, betaine/carnitine/choline family transporter CS557_03520 PF05977 Transmembrane secretion effector CS557_03525 PF06039 Malate:quinone oxidoreductase (Mqo) CS557_03530 PF00268 Ribonucleotide reductase, small chain CS557_03540 PF00317 Ribonucleotide reductase, all-alpha domain CS557_03540 PF02867 Ribonucleotide reductase, barrel domain CS557_03540 PF03477 ATP cone domain CS557_03550 PF00486 Transcriptional regulatory protein, C terminal CS557_03550 PF00072 Response regulator receiver domain CS557_03555 PF00672 HAMP domain CS557_03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_03555 PF00512 His Kinase A (phospho-acceptor) domain CS557_03565 PF17158 Membrane-associated sensor, integral membrane domain CS557_03565 PF00990 Diguanylate cyclase, GGDEF domain CS557_03570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CS557_03575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CS557_03580 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CS557_03580 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CS557_03590 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CS557_03590 PF10531 SLBB domain CS557_03590 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CS557_03595 PF00384 Molybdopterin oxidoreductase CS557_03595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CS557_03595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CS557_03600 PF00146 NADH dehydrogenase CS557_03605 PF12838 4Fe-4S dicluster domain CS557_03610 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CS557_03615 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CS557_03620 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CS557_03620 PF00361 Proton-conducting membrane transporter CS557_03625 PF00361 Proton-conducting membrane transporter CS557_03630 PF00361 Proton-conducting membrane transporter CS557_03645 PF00313 'Cold-shock' DNA-binding domain CS557_03650 PF03466 LysR substrate binding domain CS557_03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_03655 PF00175 Oxidoreductase NAD-binding domain CS557_03655 PF00970 Oxidoreductase FAD-binding domain CS557_03670 PF05552 Conserved TM helix CS557_03690 PF00291 Pyridoxal-phosphate dependent enzyme CS557_03695 PF13533 Biotin-lipoyl like CS557_03720 PF00753 Metallo-beta-lactamase superfamily CS557_03720 PF16123 Hydroxyacylglutathione hydrolase C-terminus CS557_03730 PF09334 tRNA synthetases class I (M) CS557_03730 PF01588 Putative tRNA binding domain CS557_03745 PF13302 Acetyltransferase (GNAT) domain CS557_03755 PF10609 NUBPL iron-transfer P-loop NTPase CS557_03760 PF01048 Phosphorylase superfamily CS557_03775 PF00692 dUTPase CS557_03805 PF01207 Dihydrouridine synthase (Dus) CS557_03815 PF02881 SRP54-type protein, helical bundle domain CS557_03815 PF00448 SRP54-type protein, GTPase domain CS557_03815 PF02978 Signal peptide binding domain CS557_03825 PF03309 Type III pantothenate kinase CS557_03835 PF01925 Sulfite exporter TauE/SafE CS557_03845 PF06470 SMC proteins Flexible Hinge Domain CS557_03845 PF02463 RecF/RecN/SMC N terminal domain CS557_03855 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CS557_03855 PF12826 Helix-hairpin-helix motif CS557_03855 PF03120 NAD-dependent DNA ligase OB-fold domain CS557_03855 PF01653 NAD-dependent DNA ligase adenylation domain CS557_03855 PF00533 BRCA1 C Terminus (BRCT) domain CS557_03865 PF00210 Ferritin-like domain CS557_03870 PF00578 AhpC/TSA family CS557_03875 PF12697 Alpha/beta hydrolase family CS557_03875 PF08241 Methyltransferase domain CS557_03880 PF00202 Aminotransferase class-III CS557_03880 PF06968 Biotin and Thiamin Synthesis associated domain CS557_03880 PF04055 Radical SAM superfamily CS557_03885 PF00155 Aminotransferase class I and II CS557_03905 PF02472 Biopolymer transport protein ExbD/TolR CS557_03910 PF02472 Biopolymer transport protein ExbD/TolR CS557_03915 PF01618 MotA/TolQ/ExbB proton channel family CS557_03925 PF07715 TonB-dependent Receptor Plug Domain CS557_03925 PF00593 TonB dependent receptor CS557_03930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CS557_03945 PF00528 Binding-protein-dependent transport system inner membrane component CS557_03950 PF12911 N-terminal TM domain of oligopeptide transport permease C CS557_03950 PF00528 Binding-protein-dependent transport system inner membrane component CS557_03955 PF00005 ABC transporter CS557_03955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CS557_03960 PF00849 RNA pseudouridylate synthase CS557_03960 PF01479 S4 domain CS557_03965 PF04079 Segregation and condensation complex subunit ScpB CS557_03970 PF02616 Segregation and condensation protein ScpA CS557_03985 PF01300 Telomere recombination CS557_03990 PF04315 Elongation factor P hydroxylase CS557_03995 PF02620 Large ribosomal RNA subunit accumulation protein YceD CS557_04000 PF01783 Ribosomal L32p protein family CS557_04005 PF00698 Acyl transferase domain CS557_04015 PF00550 Phosphopantetheine attachment site CS557_04020 PF01476 LysM domain CS557_04020 PF04972 BON domain CS557_04025 PF08543 Phosphomethylpyrimidine kinase CS557_04025 PF03070 TENA/THI-4/PQQC family CS557_04025 PF02581 Thiamine monophosphate synthase CS557_04030 PF13419 Haloacid dehalogenase-like hydrolase CS557_04035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CS557_04050 PF00027 Cyclic nucleotide-binding domain CS557_04050 PF01734 Patatin-like phospholipase CS557_04055 PF02261 Aspartate decarboxylase CS557_04060 PF01195 Peptidyl-tRNA hydrolase CS557_04065 PF01386 Ribosomal L25p family CS557_04070 PF14572 Phosphoribosyl synthetase-associated domain CS557_04070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CS557_04095 PF00288 GHMP kinases N terminal domain CS557_04095 PF08544 GHMP kinases C terminal CS557_04100 PF03550 Outer membrane lipoprotein LolB CS557_04110 PF01488 Shikimate / quinate 5-dehydrogenase CS557_04110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CS557_04110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CS557_04115 PF10410 DnaB-helicase binding domain of primase CS557_04115 PF01807 CHC2 zinc finger CS557_04115 PF08275 DNA primase catalytic core, N-terminal domain CS557_04115 PF08278 DNA primase DnaG DnaB-binding CS557_04120 PF13525 Outer membrane lipoprotein CS557_04125 PF01479 S4 domain CS557_04125 PF00849 RNA pseudouridylate synthase CS557_04135 PF03358 NADPH-dependent FMN reductase CS557_04140 PF01668 SmpB protein CS557_04145 PF01467 Cytidylyltransferase-like CS557_04150 PF00037 4Fe-4S binding domain CS557_04175 PF00795 Carbon-nitrogen hydrolase CS557_04175 PF02540 NAD synthase CS557_04195 PF02801 Beta-ketoacyl synthase, C-terminal domain CS557_04195 PF00109 Beta-ketoacyl synthase, N-terminal domain CS557_04200 PF12787 EcsC protein family CS557_04205 PF00164 Ribosomal protein S12/S23 CS557_04210 PF00177 Ribosomal protein S7p/S5e CS557_04215 PF03144 Elongation factor Tu domain 2 CS557_04215 PF03764 Elongation factor G, domain IV CS557_04215 PF14492 Elongation Factor G, domain II CS557_04215 PF00679 Elongation factor G C-terminus CS557_04215 PF00009 Elongation factor Tu GTP binding domain CS557_04220 PF03143 Elongation factor Tu C-terminal domain CS557_04220 PF03144 Elongation factor Tu domain 2 CS557_04220 PF00009 Elongation factor Tu GTP binding domain CS557_04235 PF00583 Acetyltransferase (GNAT) family CS557_04240 PF04376 Arginine-tRNA-protein transferase, N terminus CS557_04240 PF04377 Arginine-tRNA-protein transferase, C terminus CS557_04245 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CS557_04250 PF13847 Methyltransferase domain CS557_04250 PF10119 Predicted methyltransferase regulatory domain CS557_04255 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_04260 PF09397 Ftsk gamma domain CS557_04260 PF17854 FtsK alpha domain CS557_04260 PF01580 FtsK/SpoIIIE family CS557_04260 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CS557_04265 PF01810 LysE type translocator CS557_04275 PF03776 Septum formation topological specificity factor MinE CS557_04280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CS557_04285 PF03775 Septum formation inhibitor MinC, C-terminal domain CS557_04295 PF01553 Acyltransferase CS557_04300 PF13488 Glycine zipper CS557_04300 PF00691 OmpA family CS557_04305 PF13361 UvrD-like helicase C-terminal domain CS557_04305 PF00580 UvrD/REP helicase N-terminal domain CS557_04310 PF00692 dUTPase CS557_04315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CS557_04315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CS557_04315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CS557_04315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CS557_04320 PF00696 Amino acid kinase family CS557_04330 PF13230 Glutamine amidotransferases class-II CS557_04335 PF01814 Hemerythrin HHE cation binding domain CS557_04345 PF03658 RnfH family Ubiquitin CS557_04350 PF04355 SmpA / OmlA family CS557_04355 PF01475 Ferric uptake regulator family CS557_04360 PF00437 Type II/IV secretion system protein CS557_04365 PF00437 Type II/IV secretion system protein CS557_04370 PF01168 Alanine racemase, N-terminal domain CS557_04380 PF00149 Calcineurin-like phosphoesterase CS557_04380 PF12320 Type 5 capsule protein repressor C-terminal domain CS557_04385 PF00378 Enoyl-CoA hydratase/isomerase CS557_04410 PF01370 NAD dependent epimerase/dehydratase family CS557_04410 PF08338 Domain of unknown function (DUF1731) CS557_04415 PF01266 FAD dependent oxidoreductase CS557_04420 PF00490 Delta-aminolevulinic acid dehydratase CS557_04425 PF03061 Thioesterase superfamily CS557_04430 PF00529 HlyD membrane-fusion protein of T1SS CS557_04430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CS557_04435 PF07690 Major Facilitator Superfamily CS557_04445 PF00376 MerR family regulatory protein CS557_04445 PF09278 MerR, DNA binding CS557_04450 PF00403 Heavy-metal-associated domain CS557_04460 PF00005 ABC transporter CS557_04485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CS557_04485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CS557_04490 PF00202 Aminotransferase class-III CS557_04495 PF04958 Arginine N-succinyltransferase beta subunit CS557_04500 PF00171 Aldehyde dehydrogenase family CS557_04505 PF04996 Succinylarginine dihydrolase CS557_04510 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CS557_04515 PF00324 Amino acid permease CS557_04520 PF08212 Lipocalin-like domain CS557_04530 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CS557_04560 PF10431 C-terminal, D2-small domain, of ClpB protein CS557_04560 PF00004 ATPase family associated with various cellular activities (AAA) CS557_04560 PF07724 AAA domain (Cdc48 subfamily) CS557_04560 PF17871 AAA lid domain CS557_04615 PF04972 BON domain CS557_04615 PF00691 OmpA family CS557_04630 PF00528 Binding-protein-dependent transport system inner membrane component CS557_04635 PF00005 ABC transporter CS557_04635 PF03459 TOBE domain CS557_04640 PF02583 Metal-sensitive transcriptional repressor CS557_04645 PF01545 Cation efflux family CS557_04645 PF16916 Dimerisation domain of Zinc Transporter CS557_04650 PF02417 Chromate transporter CS557_04655 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CS557_04660 PF00005 ABC transporter CS557_04665 PF00528 Binding-protein-dependent transport system inner membrane component CS557_04670 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CS557_04675 PF00582 Universal stress protein family CS557_04695 PF01327 Polypeptide deformylase CS557_04715 PF02310 B12 binding domain CS557_04715 PF02607 B12 binding domain CS557_04715 PF02574 Homocysteine S-methyltransferase CS557_04715 PF00809 Pterin binding enzyme CS557_04715 PF02965 Vitamin B12 dependent methionine synthase, activation domain CS557_04720 PF01384 Phosphate transporter family CS557_04730 PF18073 Rubredoxin metal binding domain CS557_04735 PF01235 Sodium:alanine symporter family CS557_04740 PF00324 Amino acid permease CS557_04750 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CS557_04750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CS557_04755 PF01678 Diaminopimelate epimerase CS557_04765 PF01810 LysE type translocator CS557_04770 PF00589 Phage integrase family CS557_04770 PF02899 Phage integrase, N-terminal SAM-like domain CS557_04775 PF01012 Electron transfer flavoprotein domain CS557_04780 PF00766 Electron transfer flavoprotein FAD-binding domain CS557_04780 PF01012 Electron transfer flavoprotein domain CS557_04790 PF00521 DNA gyrase/topoisomerase IV, subunit A CS557_04790 PF03989 DNA gyrase C-terminal domain, beta-propeller CS557_04815 PF00266 Aminotransferase class-V CS557_04825 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CS557_04840 PF02687 FtsX-like permease family CS557_04840 PF12704 MacB-like periplasmic core domain CS557_04845 PF00005 ABC transporter CS557_04850 PF00753 Metallo-beta-lactamase superfamily CS557_04850 PF03772 Competence protein CS557_04850 PF13567 Domain of unknown function (DUF4131) CS557_04860 PF06965 Na+/H+ antiporter 1 CS557_04860 PF01343 Peptidase family S49 CS557_04870 PF00551 Formyl transferase CS557_04875 PF00586 AIR synthase related protein, N-terminal domain CS557_04875 PF02769 AIR synthase related protein, C-terminal domain CS557_04880 PF01594 AI-2E family transporter CS557_04885 PF11638 DnaA N-terminal domain CS557_04885 PF00308 Bacterial dnaA protein CS557_04885 PF08299 Bacterial dnaA protein helix-turn-helix CS557_04920 PF00588 SpoU rRNA Methylase family CS557_04920 PF08032 RNA 2'-O ribose methyltransferase substrate binding CS557_04925 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CS557_04935 PF00691 OmpA family CS557_04940 PF07676 WD40-like Beta Propeller Repeat CS557_04940 PF04052 TolB amino-terminal domain CS557_04950 PF02472 Biopolymer transport protein ExbD/TolR CS557_04955 PF01618 MotA/TolQ/ExbB proton channel family CS557_04960 PF03061 Thioesterase superfamily CS557_04970 PF05496 Holliday junction DNA helicase RuvB P-loop domain CS557_04970 PF17864 RuvB AAA lid domain CS557_04970 PF05491 RuvB C-terminal winged helix domain CS557_04975 PF07499 RuvA, C-terminal domain CS557_04975 PF01330 RuvA N terminal domain CS557_04985 PF01966 HD domain CS557_04995 PF02769 AIR synthase related protein, C-terminal domain CS557_04995 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CS557_04995 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CS557_05000 PF07690 Major Facilitator Superfamily CS557_05010 PF01784 NIF3 (NGG1p interacting factor 3) CS557_05015 PF00881 Nitroreductase family CS557_05020 PF00378 Enoyl-CoA hydratase/isomerase CS557_05025 PF01467 Cytidylyltransferase-like CS557_05025 PF00293 NUDIX domain CS557_05035 PF02798 Glutathione S-transferase, N-terminal domain CS557_05035 PF00043 Glutathione S-transferase, C-terminal domain CS557_05040 PF01361 Tautomerase enzyme CS557_05060 PF00578 AhpC/TSA family CS557_05075 PF06508 Queuosine biosynthesis protein QueC CS557_05080 PF04055 Radical SAM superfamily CS557_05085 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CS557_05085 PF00132 Bacterial transferase hexapeptide (six repeats) CS557_05085 PF14602 Hexapeptide repeat of succinyl-transferase CS557_05095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_05095 PF03466 LysR substrate binding domain CS557_05100 PF00005 ABC transporter CS557_05100 PF12857 TOBE-like domain CS557_05105 PF00528 Binding-protein-dependent transport system inner membrane component CS557_05110 PF00528 Binding-protein-dependent transport system inner membrane component CS557_05125 PF01063 Amino-transferase class IV CS557_05130 PF02618 YceG-like family CS557_05135 PF02223 Thymidylate kinase CS557_05140 PF00890 FAD binding domain CS557_05140 PF02910 Fumarate reductase flavoprotein C-term CS557_05145 PF13180 PDZ domain CS557_05155 PF00009 Elongation factor Tu GTP binding domain CS557_05155 PF03144 Elongation factor Tu domain 2 CS557_05155 PF00679 Elongation factor G C-terminus CS557_05155 PF06421 GTP-binding protein LepA C-terminus CS557_05160 PF10502 Signal peptidase, peptidase S26 CS557_05170 PF14622 Ribonuclease-III-like CS557_05170 PF00035 Double-stranded RNA binding motif CS557_05175 PF07650 KH domain CS557_05175 PF01926 50S ribosome-binding GTPase CS557_05185 PF02565 Recombination protein O C terminal CS557_05185 PF11967 Recombination protein O N terminal CS557_05190 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CS557_05195 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CS557_05220 PF00082 Subtilase family CS557_05220 PF05922 Peptidase inhibitor I9 CS557_05235 PF12344 Ultra-violet resistance protein B CS557_05235 PF00271 Helicase conserved C-terminal domain CS557_05235 PF02151 UvrB/uvrC motif CS557_05235 PF04851 Type III restriction enzyme, res subunit CS557_05235 PF17757 UvrB interaction domain CS557_05250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CS557_05250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CS557_05265 PF01018 GTP1/OBG CS557_05265 PF01926 50S ribosome-binding GTPase CS557_05270 PF00696 Amino acid kinase family CS557_05270 PF01472 PUA domain CS557_05280 PF07759 Protein of unknown function (DUF1615) CS557_05285 PF01207 Dihydrouridine synthase (Dus) CS557_05290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_05290 PF03466 LysR substrate binding domain CS557_05295 PF00561 alpha/beta hydrolase fold CS557_05300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_05300 PF18113 Rubredoxin binding C-terminal domain CS557_05305 PF00301 Rubredoxin CS557_05315 PF01336 OB-fold nucleic acid binding domain CS557_05315 PF00152 tRNA synthetases class II (D, K and N) CS557_05320 PF14052 Capsule assembly protein Wzi CS557_05325 PF01507 Phosphoadenosine phosphosulfate reductase family CS557_05330 PF00009 Elongation factor Tu GTP binding domain CS557_05340 PF00542 Ribosomal protein L7/L12 C-terminal domain CS557_05340 PF16320 Ribosomal protein L7/L12 dimerisation domain CS557_05345 PF00571 CBS domain CS557_05345 PF03471 Transporter associated domain CS557_05345 PF01595 Cyclin M transmembrane N-terminal domain CS557_05350 PF03466 LysR substrate binding domain CS557_05350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_05355 PF00463 Isocitrate lyase family CS557_05360 PF04170 NlpE N-terminal domain CS557_05360 PF17185 NlpE C-terminal OB domain CS557_05370 PF09190 DALR domain CS557_05370 PF01406 tRNA synthetases class I (C) catalytic domain CS557_05375 PF01380 SIS domain CS557_05375 PF00571 CBS domain CS557_05390 PF03968 OstA-like protein CS557_05395 PF12399 Branched-chain amino acid ATP-binding cassette transporter CS557_05395 PF00005 ABC transporter CS557_05405 PF02321 Outer membrane efflux protein CS557_05410 PF03412 Peptidase C39 family CS557_05410 PF00005 ABC transporter CS557_05410 PF00664 ABC transporter transmembrane region CS557_05420 PF01205 Uncharacterized protein family UPF0029 CS557_05420 PF09186 Domain of unknown function (DUF1949) CS557_05425 PF00132 Bacterial transferase hexapeptide (six repeats) CS557_05435 PF01596 O-methyltransferase CS557_05445 PF00037 4Fe-4S binding domain CS557_05445 PF11953 Domain of unknown function (DUF3470) CS557_05450 PF05188 MutS domain II CS557_05450 PF05192 MutS domain III CS557_05450 PF01624 MutS domain I CS557_05450 PF00488 MutS domain V CS557_05450 PF05190 MutS family domain IV CS557_05470 PF02384 N-6 DNA Methylase CS557_05495 PF12102 Domain of unknown function (DUF3578) CS557_05495 PF07728 AAA domain (dynein-related subfamily) CS557_05505 PF13087 AAA domain CS557_05505 PF13195 Protein of unknown function (DUF4011) CS557_05505 PF13087 AAA domain CS557_05505 PF13086 AAA domain CS557_05505 PF13195 Protein of unknown function (DUF4011) CS557_05505 PF13086 AAA domain CS557_05510 PF08240 Alcohol dehydrogenase GroES-like domain CS557_05510 PF00107 Zinc-binding dehydrogenase CS557_05515 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CS557_05520 PF05853 beta-keto acid cleavage enzyme CS557_05525 PF07690 Major Facilitator Superfamily CS557_05540 PF03601 Conserved hypothetical protein 698 CS557_05570 PF04303 PrpF protein CS557_05575 PF00289 Biotin carboxylase, N-terminal domain CS557_05575 PF00364 Biotin-requiring enzyme CS557_05575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CS557_05575 PF02436 Conserved carboxylase domain CS557_05575 PF02785 Biotin carboxylase C-terminal domain CS557_05575 PF00682 HMGL-like CS557_05580 PF01292 Prokaryotic cytochrome b561 CS557_05585 PF01545 Cation efflux family CS557_05585 PF16916 Dimerisation domain of Zinc Transporter CS557_05600 PF00005 ABC transporter CS557_05605 PF02705 K+ potassium transporter CS557_05610 PF03741 Integral membrane protein TerC family CS557_05610 PF03471 Transporter associated domain CS557_05630 PF09297 NADH pyrophosphatase zinc ribbon domain CS557_05630 PF00293 NUDIX domain CS557_05635 PF00672 HAMP domain CS557_05635 PF00512 His Kinase A (phospho-acceptor) domain CS557_05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_05640 PF00486 Transcriptional regulatory protein, C terminal CS557_05640 PF00072 Response regulator receiver domain CS557_05650 PF00576 HIUase/Transthyretin family CS557_05665 PF00717 Peptidase S24-like CS557_05670 PF11799 impB/mucB/samB family C-terminal domain CS557_05670 PF00817 impB/mucB/samB family CS557_05670 PF13438 Domain of unknown function (DUF4113) CS557_05670 PF11798 IMS family HHH motif CS557_05685 PF12706 Beta-lactamase superfamily domain CS557_05695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS557_05695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CS557_05700 PF01553 Acyltransferase CS557_05705 PF01435 Peptidase family M48 CS557_05720 PF09424 Yqey-like protein CS557_05725 PF01165 Ribosomal protein S21 CS557_05730 PF00814 Glycoprotease family CS557_05740 PF00892 EamA-like transporter family CS557_05760 PF00069 Protein kinase domain CS557_05760 PF03793 PASTA domain CS557_05785 PF09339 IclR helix-turn-helix domain CS557_05785 PF01614 Bacterial transcriptional regulator CS557_05790 PF00355 Rieske [2Fe-2S] domain CS557_05800 PF00355 Rieske [2Fe-2S] domain CS557_05810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CS557_05815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_05815 PF14759 Reductase C-terminal CS557_05820 PF07690 Major Facilitator Superfamily CS557_05830 PF12697 Alpha/beta hydrolase family CS557_05840 PF01958 Domain of unknown function DUF108 CS557_05840 PF03447 Homoserine dehydrogenase, NAD binding domain CS557_05845 PF00171 Aldehyde dehydrogenase family CS557_05850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CS557_05850 PF00205 Thiamine pyrophosphate enzyme, central domain CS557_05850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CS557_05860 PF01638 HxlR-like helix-turn-helix CS557_05870 PF00561 alpha/beta hydrolase fold CS557_05870 PF00106 short chain dehydrogenase CS557_05885 PF00206 Lyase CS557_05885 PF08328 Adenylosuccinate lyase C-terminal CS557_05890 PF04356 Protein of unknown function (DUF489) CS557_05900 PF00293 NUDIX domain CS557_05910 PF00132 Bacterial transferase hexapeptide (six repeats) CS557_05915 PF07943 Penicillin-binding protein 5, C-terminal domain CS557_05915 PF00768 D-alanyl-D-alanine carboxypeptidase CS557_05930 PF01975 Survival protein SurE CS557_05935 PF01476 LysM domain CS557_05935 PF01551 Peptidase family M23 CS557_05940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_05940 PF03466 LysR substrate binding domain CS557_05945 PF05362 Lon protease (S16) C-terminal proteolytic domain CS557_05945 PF13654 AAA domain CS557_05950 PF07690 Major Facilitator Superfamily CS557_05955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CS557_05960 PF13593 SBF-like CPA transporter family (DUF4137) CS557_05975 PF01197 Ribosomal protein L31 CS557_05990 PF04055 Radical SAM superfamily CS557_05995 PF01132 Elongation factor P (EF-P) OB domain CS557_05995 PF08207 Elongation factor P (EF-P) KOW-like domain CS557_05995 PF09285 Elongation factor P, C-terminal CS557_06000 PF13722 5TM C-terminal transporter carbon starvation CstA CS557_06000 PF02554 Carbon starvation protein CstA CS557_06005 PF04328 Selenoprotein, putative CS557_06010 PF07726 ATPase family associated with various cellular activities (AAA) CS557_06010 PF17863 AAA lid domain CS557_06020 PF11992 Domain of unknown function (DUF3488) CS557_06020 PF13559 Domain of unknown function (DUF4129) CS557_06020 PF01841 Transglutaminase-like superfamily CS557_06065 PF17954 Quercetinase C-terminal cupin domain CS557_06065 PF02678 Pirin CS557_06070 PF00764 Arginosuccinate synthase CS557_06075 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_06075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CS557_06085 PF12833 Helix-turn-helix domain CS557_06085 PF06719 AraC-type transcriptional regulator N-terminus CS557_06090 PF07690 Major Facilitator Superfamily CS557_06100 PF12146 Serine aminopeptidase, S33 CS557_06105 PF00108 Thiolase, N-terminal domain CS557_06105 PF02803 Thiolase, C-terminal domain CS557_06110 PF01144 Coenzyme A transferase CS557_06115 PF01144 Coenzyme A transferase CS557_06120 PF04444 Catechol dioxygenase N terminus CS557_06120 PF00775 Dioxygenase CS557_06125 PF02426 Muconolactone delta-isomerase CS557_06130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CS557_06130 PF13378 Enolase C-terminal domain-like CS557_06135 PF00175 Oxidoreductase NAD-binding domain CS557_06135 PF00970 Oxidoreductase FAD-binding domain CS557_06135 PF00111 2Fe-2S iron-sulfur cluster binding domain CS557_06140 PF00866 Ring hydroxylating beta subunit CS557_06145 PF00355 Rieske [2Fe-2S] domain CS557_06145 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CS557_06175 PF01979 Amidohydrolase family CS557_06185 PF01502 Phosphoribosyl-AMP cyclohydrolase CS557_06190 PF02649 Type I GTP cyclohydrolase folE2 CS557_06205 PF02492 CobW/HypB/UreG, nucleotide-binding domain CS557_06205 PF07683 Cobalamin synthesis protein cobW C-terminal domain CS557_06210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_06210 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_06210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_06210 PF09317 Domain of unknown function (DUF1974) CS557_06215 PF00158 Sigma-54 interaction domain CS557_06215 PF02954 Bacterial regulatory protein, Fis family CS557_06215 PF13185 GAF domain CS557_06220 PF00753 Metallo-beta-lactamase superfamily CS557_06230 PF01925 Sulfite exporter TauE/SafE CS557_06260 PF13649 Methyltransferase domain CS557_06265 PF00512 His Kinase A (phospho-acceptor) domain CS557_06265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_06265 PF08521 Two-component sensor kinase N-terminal CS557_06270 PF00486 Transcriptional regulatory protein, C terminal CS557_06270 PF00072 Response regulator receiver domain CS557_06290 PF00155 Aminotransferase class I and II CS557_06295 PF06826 Predicted Permease Membrane Region CS557_06295 PF02080 TrkA-C domain CS557_06320 PF05662 Coiled stalk of trimeric autotransporter adhesin CS557_06320 PF13018 Extended Signal Peptide of Type V secretion system CS557_06320 PF03895 YadA-like membrane anchor domain CS557_06320 PF05658 Head domain of trimeric autotransporter adhesin CS557_06330 PF09339 IclR helix-turn-helix domain CS557_06330 PF01614 Bacterial transcriptional regulator CS557_06335 PF01144 Coenzyme A transferase CS557_06340 PF01144 Coenzyme A transferase CS557_06345 PF00108 Thiolase, N-terminal domain CS557_06345 PF02803 Thiolase, C-terminal domain CS557_06350 PF10397 Adenylosuccinate lyase C-terminus CS557_06350 PF00206 Lyase CS557_06355 PF00561 alpha/beta hydrolase fold CS557_06360 PF07690 Major Facilitator Superfamily CS557_06365 PF02627 Carboxymuconolactone decarboxylase family CS557_06370 PF00775 Dioxygenase CS557_06370 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CS557_06375 PF00775 Dioxygenase CS557_06380 PF01487 Type I 3-dehydroquinase CS557_06385 PF05048 Periplasmic copper-binding protein (NosD) CS557_06390 PF04966 Carbohydrate-selective porin, OprB family CS557_06395 PF01011 PQQ enzyme repeat CS557_06395 PF13360 PQQ-like domain CS557_06405 PF00576 HIUase/Transthyretin family CS557_06410 PF00860 Permease family CS557_06420 PF01494 FAD binding domain CS557_06425 PF07729 FCD domain CS557_06425 PF00392 Bacterial regulatory proteins, gntR family CS557_06430 PF03561 Allantoicase repeat CS557_06435 PF04115 Ureidoglycolate lyase CS557_06450 PF03466 LysR substrate binding domain CS557_06450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_06455 PF00355 Rieske [2Fe-2S] domain CS557_06460 PF07702 UTRA domain CS557_06460 PF00392 Bacterial regulatory proteins, gntR family CS557_06465 PF05962 HutD CS557_06470 PF17392 Urocanase C-terminal domain CS557_06470 PF01175 Urocanase Rossmann-like domain CS557_06470 PF17391 Urocanase N-terminal domain CS557_06475 PF00221 Aromatic amino acid lyase CS557_06480 PF00324 Amino acid permease CS557_06485 PF01979 Amidohydrolase family CS557_06490 PF00491 Arginase family CS557_06495 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CS557_06495 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CS557_06510 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CS557_06510 PF12833 Helix-turn-helix domain CS557_06515 PF00392 Bacterial regulatory proteins, gntR family CS557_06515 PF00155 Aminotransferase class I and II CS557_06525 PF12833 Helix-turn-helix domain CS557_06525 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CS557_06540 PF00384 Molybdopterin oxidoreductase CS557_06545 PF02634 FdhD/NarQ family CS557_06550 PF00440 Bacterial regulatory proteins, tetR family CS557_06550 PF17932 Tetracyclin repressor-like, C-terminal domain CS557_06565 PF00106 short chain dehydrogenase CS557_06570 PF00743 Flavin-binding monooxygenase-like CS557_06575 PF04072 Leucine carboxyl methyltransferase CS557_06580 PF03746 LamB/YcsF family CS557_06585 PF02682 Carboxyltransferase domain, subdomain C and D CS557_06590 PF02785 Biotin carboxylase C-terminal domain CS557_06590 PF00289 Biotin carboxylase, N-terminal domain CS557_06590 PF00364 Biotin-requiring enzyme CS557_06590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CS557_06595 PF01435 Peptidase family M48 CS557_06600 PF00027 Cyclic nucleotide-binding domain CS557_06600 PF13545 Crp-like helix-turn-helix domain CS557_06605 PF02566 OsmC-like protein CS557_06615 PF17871 AAA lid domain CS557_06615 PF02861 Clp amino terminal domain, pathogenicity island component CS557_06615 PF10431 C-terminal, D2-small domain, of ClpB protein CS557_06615 PF00004 ATPase family associated with various cellular activities (AAA) CS557_06615 PF07724 AAA domain (Cdc48 subfamily) CS557_06625 PF01170 Putative RNA methylase family UPF0020 CS557_06625 PF10672 S-adenosylmethionine-dependent methyltransferase CS557_06625 PF02926 THUMP domain CS557_06635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CS557_06635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CS557_06640 PF01979 Amidohydrolase family CS557_06655 PF02390 Putative methyltransferase CS557_06665 PF00043 Glutathione S-transferase, C-terminal domain CS557_06665 PF02798 Glutathione S-transferase, N-terminal domain CS557_06695 PF00487 Fatty acid desaturase CS557_06705 PF10417 C-terminal domain of 1-Cys peroxiredoxin CS557_06705 PF00578 AhpC/TSA family CS557_06715 PF04408 Helicase associated domain (HA2) CS557_06715 PF00271 Helicase conserved C-terminal domain CS557_06715 PF00270 DEAD/DEAH box helicase CS557_06715 PF11898 Domain of unknown function (DUF3418) CS557_06715 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CS557_06720 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CS557_06720 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CS557_06730 PF04055 Radical SAM superfamily CS557_06735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CS557_06735 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_06755 PF03330 Lytic transglycolase CS557_06755 PF05036 Sporulation related domain CS557_06760 PF13406 Transglycosylase SLT domain CS557_06765 PF01098 Cell cycle protein CS557_06775 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CS557_06775 PF14489 QueF-like protein CS557_06780 PF01061 ABC-2 type transporter CS557_06785 PF00005 ABC transporter CS557_06790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_06790 PF03466 LysR substrate binding domain CS557_06810 PF04966 Carbohydrate-selective porin, OprB family CS557_06820 PF06736 Protein of unknown function (DUF1211) CS557_06860 PF00464 Serine hydroxymethyltransferase CS557_06865 PF00037 4Fe-4S binding domain CS557_06880 PF05360 yiaA/B two helix domain CS557_06885 PF03462 PCRF domain CS557_06885 PF00472 RF-1 domain CS557_06890 PF13847 Methyltransferase domain CS557_06890 PF17827 PrmC N-terminal domain CS557_06895 PF04299 Putative FMN-binding domain CS557_06900 PF12833 Helix-turn-helix domain CS557_06900 PF02311 AraC-like ligand binding domain CS557_06905 PF00106 short chain dehydrogenase CS557_06910 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CS557_06910 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CS557_06915 PF01613 Flavin reductase like domain CS557_06925 PF00561 alpha/beta hydrolase fold CS557_06930 PF03280 Proteobacterial lipase chaperone protein CS557_06940 PF00899 ThiF family CS557_06945 PF03109 ABC1 family CS557_06950 PF02152 Dihydroneopterin aldolase CS557_06970 PF03232 Ubiquinone biosynthesis protein COQ7 CS557_06975 PF07690 Major Facilitator Superfamily CS557_06980 PF01103 Surface antigen CS557_06980 PF07244 Surface antigen variable number repeat CS557_06980 PF17243 POTRA domain TamA domain 1 CS557_07000 PF11791 Aconitate B N-terminal domain CS557_07000 PF06434 Aconitate hydratase 2 N-terminus CS557_07000 PF00330 Aconitase family (aconitate hydratase) CS557_07010 PF00939 Sodium:sulfate symporter transmembrane region CS557_07015 PF00520 Ion transport protein CS557_07015 PF00027 Cyclic nucleotide-binding domain CS557_07020 PF01810 LysE type translocator CS557_07025 PF09997 Predicted membrane protein (DUF2238) CS557_07030 PF07690 Major Facilitator Superfamily CS557_07035 PF03466 LysR substrate binding domain CS557_07035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_07040 PF04284 Protein of unknown function (DUF441) CS557_07060 PF00175 Oxidoreductase NAD-binding domain CS557_07060 PF00970 Oxidoreductase FAD-binding domain CS557_07065 PF18389 TrmO C-terminal domain CS557_07065 PF01980 tRNA-methyltransferase O CS557_07075 PF00437 Type II/IV secretion system protein CS557_07085 PF00072 Response regulator receiver domain CS557_07085 PF00486 Transcriptional regulatory protein, C terminal CS557_07090 PF08521 Two-component sensor kinase N-terminal CS557_07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_07090 PF00512 His Kinase A (phospho-acceptor) domain CS557_07100 PF00293 NUDIX domain CS557_07110 PF00912 Transglycosylase CS557_07110 PF00905 Penicillin binding protein transpeptidase domain CS557_07110 PF14814 Bifunctional transglycosylase second domain CS557_07120 PF01513 ATP-NAD kinase CS557_07125 PF07023 Protein of unknown function (DUF1315) CS557_07130 PF04717 Type VI secretion system, phage-baseplate injector CS557_07170 PF00591 Glycosyl transferase family, a/b domain CS557_07170 PF02885 Glycosyl transferase family, helical bundle domain CS557_07175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_07175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_07175 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_07185 PF01842 ACT domain CS557_07185 PF00800 Prephenate dehydratase CS557_07185 PF01817 Chorismate mutase type II CS557_07190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CS557_07200 PF03781 Sulfatase-modifying factor enzyme 1 CS557_07205 PF07687 Peptidase dimerisation domain CS557_07205 PF01546 Peptidase family M20/M25/M40 CS557_07210 PF01137 RNA 3'-terminal phosphate cyclase CS557_07210 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CS557_07225 PF01139 tRNA-splicing ligase RtcB CS557_07230 PF00753 Metallo-beta-lactamase superfamily CS557_07240 PF00158 Sigma-54 interaction domain CS557_07240 PF06956 Regulator of RNA terminal phosphate cyclase CS557_07255 PF03883 Peroxide stress protein YaaA CS557_07275 PF05690 Thiazole biosynthesis protein ThiG CS557_07290 PF04542 Sigma-70 region 2 CS557_07290 PF00140 Sigma-70 factor, region 1.2 CS557_07290 PF04545 Sigma-70, region 4 CS557_07300 PF00313 'Cold-shock' DNA-binding domain CS557_07305 PF00270 DEAD/DEAH box helicase CS557_07305 PF00271 Helicase conserved C-terminal domain CS557_07310 PF01116 Fructose-bisphosphate aldolase class-II CS557_07315 PF00639 PPIC-type PPIASE domain CS557_07315 PF09312 SurA N-terminal domain CS557_07320 PF03968 OstA-like protein CS557_07320 PF04453 LPS transport system D CS557_07325 PF01636 Phosphotransferase enzyme family CS557_07330 PF00483 Nucleotidyl transferase CS557_07335 PF02527 rRNA small subunit methyltransferase G CS557_07340 PF13614 AAA domain CS557_07345 PF17762 HTH domain found in ParB protein CS557_07345 PF02195 ParB-like nuclease domain CS557_07350 PF01618 MotA/TolQ/ExbB proton channel family CS557_07360 PF00664 ABC transporter transmembrane region CS557_07360 PF00005 ABC transporter CS557_07365 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CS557_07370 PF02348 Cytidylyltransferase CS557_07375 PF09115 DNA polymerase III, delta subunit, C terminal CS557_07385 PF01026 TatD related DNase CS557_07395 PF12019 Type II transport protein GspH CS557_07395 PF07963 Prokaryotic N-terminal methylation motif CS557_07400 PF02501 Type II secretion system (T2SS), protein I CS557_07400 PF07963 Prokaryotic N-terminal methylation motif CS557_07405 PF11612 Type II secretion system (T2SS), protein J CS557_07405 PF07963 Prokaryotic N-terminal methylation motif CS557_07410 PF03934 Type II secretion system (T2SS), protein K CS557_07420 PF03167 Uracil DNA glycosylase superfamily CS557_07430 PF14437 MafB19-like deaminase CS557_07440 PF02224 Cytidylate kinase CS557_07445 PF00575 S1 RNA binding domain CS557_07450 PF00216 Bacterial DNA-binding protein CS557_07465 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CS557_07475 PF00743 Flavin-binding monooxygenase-like CS557_07485 PF03969 AFG1-like ATPase CS557_07490 PF01274 Malate synthase CS557_07520 PF05525 Branched-chain amino acid transport protein CS557_07525 PF00557 Metallopeptidase family M24 CS557_07530 PF03466 LysR substrate binding domain CS557_07530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_07535 PF13291 ACT domain CS557_07535 PF04607 Region found in RelA / SpoT proteins CS557_07535 PF02824 TGS domain CS557_07545 PF00462 Glutaredoxin CS557_07550 PF00202 Aminotransferase class-III CS557_07555 PF01380 SIS domain CS557_07555 PF00571 CBS domain CS557_07580 PF02881 SRP54-type protein, helical bundle domain CS557_07580 PF00448 SRP54-type protein, GTPase domain CS557_07590 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CS557_07605 PF08173 Membrane bound YbgT-like protein CS557_07610 PF02322 Cytochrome bd terminal oxidase subunit II CS557_07615 PF01654 Cytochrome bd terminal oxidase subunit I CS557_07635 PF00294 pfkB family carbohydrate kinase CS557_07640 PF08367 Peptidase M16C associated CS557_07640 PF00675 Insulinase (Peptidase family M16) CS557_07640 PF05193 Peptidase M16 inactive domain CS557_07645 PF02253 Phospholipase A1 CS557_07655 PF02386 Cation transport protein CS557_07660 PF02254 TrkA-N domain CS557_07660 PF02080 TrkA-C domain CS557_07665 PF00585 C-terminal regulatory domain of Threonine dehydratase CS557_07665 PF00291 Pyridoxal-phosphate dependent enzyme CS557_07670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CS557_07685 PF02774 Semialdehyde dehydrogenase, dimerisation domain CS557_07685 PF01118 Semialdehyde dehydrogenase, NAD binding domain CS557_07695 PF02617 ATP-dependent Clp protease adaptor protein ClpS CS557_07700 PF17871 AAA lid domain CS557_07700 PF02861 Clp amino terminal domain, pathogenicity island component CS557_07700 PF07724 AAA domain (Cdc48 subfamily) CS557_07700 PF00004 ATPase family associated with various cellular activities (AAA) CS557_07700 PF10431 C-terminal, D2-small domain, of ClpB protein CS557_07705 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CS557_07710 PF12848 ABC transporter CS557_07710 PF00005 ABC transporter CS557_07715 PF00793 DAHP synthetase I family CS557_07720 PF12697 Alpha/beta hydrolase family CS557_07730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_07730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CS557_07760 PF06418 CTP synthase N-terminus CS557_07760 PF00117 Glutamine amidotransferase class-I CS557_07765 PF00793 DAHP synthetase I family CS557_07770 PF03952 Enolase, N-terminal domain CS557_07770 PF00113 Enolase, C-terminal TIM barrel domain CS557_07775 PF04977 Septum formation initiator CS557_07780 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CS557_07790 PF04143 Sulphur transport CS557_07800 PF00753 Metallo-beta-lactamase superfamily CS557_07815 PF13091 PLD-like domain CS557_07820 PF08240 Alcohol dehydrogenase GroES-like domain CS557_07820 PF00107 Zinc-binding dehydrogenase CS557_07825 PF01425 Amidase CS557_07830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CS557_07830 PF00364 Biotin-requiring enzyme CS557_07830 PF00289 Biotin carboxylase, N-terminal domain CS557_07830 PF02785 Biotin carboxylase C-terminal domain CS557_07835 PF07729 FCD domain CS557_07835 PF00392 Bacterial regulatory proteins, gntR family CS557_07845 PF12833 Helix-turn-helix domain CS557_07845 PF06719 AraC-type transcriptional regulator N-terminus CS557_07850 PF00107 Zinc-binding dehydrogenase CS557_07850 PF08240 Alcohol dehydrogenase GroES-like domain CS557_07855 PF01965 DJ-1/PfpI family CS557_07860 PF02558 Ketopantoate reductase PanE/ApbA CS557_07860 PF08546 Ketopantoate reductase PanE/ApbA C terminal CS557_07870 PF00171 Aldehyde dehydrogenase family CS557_07880 PF00465 Iron-containing alcohol dehydrogenase CS557_07890 PF07690 Major Facilitator Superfamily CS557_07895 PF12146 Serine aminopeptidase, S33 CS557_07900 PF00108 Thiolase, N-terminal domain CS557_07900 PF02803 Thiolase, C-terminal domain CS557_07905 PF01144 Coenzyme A transferase CS557_07910 PF01144 Coenzyme A transferase CS557_07915 PF03594 Benzoate membrane transport protein CS557_07920 PF00106 short chain dehydrogenase CS557_07925 PF00175 Oxidoreductase NAD-binding domain CS557_07925 PF00970 Oxidoreductase FAD-binding domain CS557_07925 PF00111 2Fe-2S iron-sulfur cluster binding domain CS557_07930 PF00866 Ring hydroxylating beta subunit CS557_07935 PF00355 Rieske [2Fe-2S] domain CS557_07935 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CS557_07940 PF00775 Dioxygenase CS557_07940 PF04444 Catechol dioxygenase N terminus CS557_07945 PF02426 Muconolactone delta-isomerase CS557_07955 PF03466 LysR substrate binding domain CS557_07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_07960 PF04909 Amidohydrolase CS557_07965 PF18381 YcaO cyclodehydratase C-terminal domain CS557_07965 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CS557_07975 PF00106 short chain dehydrogenase CS557_07990 PF00289 Biotin carboxylase, N-terminal domain CS557_07990 PF02785 Biotin carboxylase C-terminal domain CS557_07990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CS557_07995 PF01402 Ribbon-helix-helix protein, copG family CS557_07995 PF08753 NikR C terminal nickel binding domain CS557_08000 PF09084 NMT1/THI5 like CS557_08005 PF00005 ABC transporter CS557_08010 PF00528 Binding-protein-dependent transport system inner membrane component CS557_08035 PF03466 LysR substrate binding domain CS557_08035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_08040 PF00682 HMGL-like CS557_08045 PF02785 Biotin carboxylase C-terminal domain CS557_08045 PF00289 Biotin carboxylase, N-terminal domain CS557_08045 PF00364 Biotin-requiring enzyme CS557_08045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CS557_08050 PF00378 Enoyl-CoA hydratase/isomerase CS557_08055 PF01039 Carboxyl transferase domain CS557_08060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_08060 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_08060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_08065 PF00440 Bacterial regulatory proteins, tetR family CS557_08070 PF00501 AMP-binding enzyme CS557_08070 PF13193 AMP-binding enzyme C-terminal domain CS557_08085 PF07690 Major Facilitator Superfamily CS557_08090 PF02803 Thiolase, C-terminal domain CS557_08090 PF00108 Thiolase, N-terminal domain CS557_08095 PF01144 Coenzyme A transferase CS557_08100 PF01144 Coenzyme A transferase CS557_08105 PF03466 LysR substrate binding domain CS557_08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_08115 PF00593 TonB dependent receptor CS557_08115 PF07715 TonB-dependent Receptor Plug Domain CS557_08125 PF01717 Cobalamin-independent synthase, Catalytic domain CS557_08125 PF08267 Cobalamin-independent synthase, N-terminal domain CS557_08130 PF01613 Flavin reductase like domain CS557_08135 PF01925 Sulfite exporter TauE/SafE CS557_08155 PF09905 DNA-binding protein VF530 CS557_08175 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_08175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_08175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_08185 PF00501 AMP-binding enzyme CS557_08185 PF13193 AMP-binding enzyme C-terminal domain CS557_08220 PF00919 Uncharacterized protein family UPF0004 CS557_08220 PF04055 Radical SAM superfamily CS557_08220 PF01938 TRAM domain CS557_08225 PF03412 Peptidase C39 family CS557_08225 PF00005 ABC transporter CS557_08225 PF00664 ABC transporter transmembrane region CS557_08230 PF00529 HlyD membrane-fusion protein of T1SS CS557_08230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CS557_08310 PF12833 Helix-turn-helix domain CS557_08315 PF02525 Flavodoxin-like fold CS557_08325 PF00990 Diguanylate cyclase, GGDEF domain CS557_08330 PF01264 Chorismate synthase CS557_08335 PF05175 Methyltransferase small domain CS557_08340 PF00291 Pyridoxal-phosphate dependent enzyme CS557_08350 PF01434 Peptidase family M41 CS557_08350 PF00004 ATPase family associated with various cellular activities (AAA) CS557_08350 PF17862 AAA+ lid domain CS557_08360 PF05166 YcgL domain CS557_08365 PF01612 3'-5' exonuclease CS557_08365 PF00570 HRDC domain CS557_08370 PF13662 Toprim domain CS557_08370 PF02132 RecR protein CS557_08375 PF02575 YbaB/EbfC DNA-binding family CS557_08380 PF01053 Cys/Met metabolism PLP-dependent enzyme CS557_08390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CS557_08390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CS557_08400 PF01230 HIT domain CS557_08425 PF02684 Lipid-A-disaccharide synthetase CS557_08445 PF01925 Sulfite exporter TauE/SafE CS557_08450 PF00793 DAHP synthetase I family CS557_08460 PF07715 TonB-dependent Receptor Plug Domain CS557_08460 PF00593 TonB dependent receptor CS557_08470 PF02654 Cobalamin-5-phosphate synthase CS557_08480 PF02277 Phosphoribosyltransferase CS557_08485 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CS557_08495 PF13419 Haloacid dehalogenase-like hydrolase CS557_08505 PF00593 TonB dependent receptor CS557_08505 PF07715 TonB-dependent Receptor Plug Domain CS557_08510 PF07690 Major Facilitator Superfamily CS557_08525 PF06276 Ferric iron reductase FhuF-like transporter CS557_08525 PF04183 IucA / IucC family CS557_08530 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CS557_08535 PF04183 IucA / IucC family CS557_08535 PF06276 Ferric iron reductase FhuF-like transporter CS557_08540 PF04073 Aminoacyl-tRNA editing domain CS557_08550 PF03109 ABC1 family CS557_08555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_08555 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_08555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_08560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_08560 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_08560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_08565 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_08565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CS557_08570 PF00487 Fatty acid desaturase CS557_08575 PF12852 Cupin CS557_08575 PF12833 Helix-turn-helix domain CS557_08580 PF00132 Bacterial transferase hexapeptide (six repeats) CS557_08580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CS557_08585 PF07977 FabA-like domain CS557_08590 PF00132 Bacterial transferase hexapeptide (six repeats) CS557_08590 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CS557_08600 PF07244 Surface antigen variable number repeat CS557_08600 PF01103 Surface antigen CS557_08605 PF02163 Peptidase family M50 CS557_08605 PF17820 PDZ domain CS557_08605 PF13180 PDZ domain CS557_08610 PF13288 DXP reductoisomerase C-terminal domain CS557_08610 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CS557_08610 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CS557_08620 PF01255 Putative undecaprenyl diphosphate synthase CS557_08625 PF01765 Ribosome recycling factor CS557_08630 PF00696 Amino acid kinase family CS557_08635 PF04055 Radical SAM superfamily CS557_08635 PF00919 Uncharacterized protein family UPF0004 CS557_08635 PF18693 TRAM domain CS557_08640 PF00989 PAS fold CS557_08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_08640 PF00512 His Kinase A (phospho-acceptor) domain CS557_08645 PF02954 Bacterial regulatory protein, Fis family CS557_08645 PF00072 Response regulator receiver domain CS557_08645 PF00158 Sigma-54 interaction domain CS557_08650 PF00440 Bacterial regulatory proteins, tetR family CS557_08655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CS557_08655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CS557_08665 PF02542 YgbB family CS557_08675 PF01266 FAD dependent oxidoreductase CS557_08685 PF10415 Fumarase C C-terminus CS557_08685 PF00206 Lyase CS557_08690 PF16363 GDP-mannose 4,6 dehydratase CS557_08695 PF02635 DsrE/DsrF-like family CS557_08715 PF00892 EamA-like transporter family CS557_08720 PF00392 Bacterial regulatory proteins, gntR family CS557_08720 PF00155 Aminotransferase class I and II CS557_08725 PF01638 HxlR-like helix-turn-helix CS557_08730 PF00994 Probable molybdopterin binding domain CS557_08730 PF03454 MoeA C-terminal region (domain IV) CS557_08730 PF03453 MoeA N-terminal region (domain I and II) CS557_08735 PF00994 Probable molybdopterin binding domain CS557_08735 PF01967 MoaC family CS557_08740 PF02391 MoaE protein CS557_08750 PF04055 Radical SAM superfamily CS557_08750 PF06463 Molybdenum Cofactor Synthesis C CS557_08755 PF00384 Molybdopterin oxidoreductase CS557_08755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CS557_08755 PF01568 Molydopterin dinucleotide binding domain CS557_08760 PF00291 Pyridoxal-phosphate dependent enzyme CS557_08765 PF12804 MobA-like NTP transferase domain CS557_08770 PF04324 BFD-like [2Fe-2S] binding domain CS557_08770 PF00384 Molybdopterin oxidoreductase CS557_08770 PF01568 Molydopterin dinucleotide binding domain CS557_08770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CS557_08775 PF18267 Rubredoxin NAD+ reductase C-terminal domain CS557_08775 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_08775 PF04324 BFD-like [2Fe-2S] binding domain CS557_08775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CS557_08775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CS557_08780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CS557_08780 PF13806 Rieske-like [2Fe-2S] domain CS557_08780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CS557_08780 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_08780 PF18267 Rubredoxin NAD+ reductase C-terminal domain CS557_08780 PF04324 BFD-like [2Fe-2S] binding domain CS557_08785 PF07690 Major Facilitator Superfamily CS557_08795 PF00005 ABC transporter CS557_08800 PF01220 Dehydroquinase class II CS557_08805 PF00364 Biotin-requiring enzyme CS557_08810 PF00289 Biotin carboxylase, N-terminal domain CS557_08810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CS557_08810 PF02785 Biotin carboxylase C-terminal domain CS557_08820 PF01425 Amidase CS557_08825 PF12832 MFS_1 like family CS557_08830 PF00324 Amino acid permease CS557_08840 PF14497 Glutathione S-transferase, C-terminal domain CS557_08840 PF02798 Glutathione S-transferase, N-terminal domain CS557_08855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CS557_08860 PF01645 Conserved region in glutamate synthase CS557_08890 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CS557_08890 PF01565 FAD binding domain CS557_08895 PF01451 Low molecular weight phosphotyrosine protein phosphatase CS557_08900 PF00465 Iron-containing alcohol dehydrogenase CS557_08905 PF03061 Thioesterase superfamily CS557_08910 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CS557_08910 PF12169 DNA polymerase III subunits gamma and tau domain III CS557_08910 PF12170 DNA polymerase III tau subunit V interacting with alpha CS557_08915 PF08007 Cupin superfamily protein CS557_08945 PF00916 Sulfate permease family CS557_08945 PF01740 STAS domain CS557_08950 PF00375 Sodium:dicarboxylate symporter family CS557_08960 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CS557_08965 PF00924 Mechanosensitive ion channel CS557_08980 PF00664 ABC transporter transmembrane region CS557_08980 PF00005 ABC transporter CS557_08990 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CS557_08990 PF12833 Helix-turn-helix domain CS557_08995 PF01597 Glycine cleavage H-protein CS557_09000 PF00474 Sodium:solute symporter family CS557_09005 PF01037 Lrp/AsnC ligand binding domain CS557_09010 PF00171 Aldehyde dehydrogenase family CS557_09010 PF01619 Proline dehydrogenase CS557_09010 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CS557_09010 PF14850 DNA-binding domain of Proline dehydrogenase CS557_09020 PF05958 tRNA (Uracil-5-)-methyltransferase CS557_09030 PF09992 Phosphodiester glycosidase CS557_09040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CS557_09045 PF09857 Putative toxin of bacterial toxin-antitoxin pair CS557_09055 PF04264 YceI-like domain CS557_09065 PF02780 Transketolase, C-terminal domain CS557_09065 PF00456 Transketolase, thiamine diphosphate binding domain CS557_09065 PF02779 Transketolase, pyrimidine binding domain CS557_09070 PF02773 S-adenosylmethionine synthetase, C-terminal domain CS557_09070 PF02772 S-adenosylmethionine synthetase, central domain CS557_09070 PF00438 S-adenosylmethionine synthetase, N-terminal domain CS557_09105 PF00313 'Cold-shock' DNA-binding domain CS557_09120 PF02075 Crossover junction endodeoxyribonuclease RuvC CS557_09125 PF01256 Carbohydrate kinase CS557_09125 PF03853 YjeF-related protein N-terminus CS557_09130 PF08331 Domain of unknown function (DUF1730) CS557_09135 PF06968 Biotin and Thiamin Synthesis associated domain CS557_09135 PF04055 Radical SAM superfamily CS557_09150 PF16970 Type-1 fimbrial protein, A CS557_09155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CS557_09155 PF02753 Pili assembly chaperone PapD, C-terminal domain CS557_09160 PF13954 PapC N-terminal domain CS557_09160 PF00577 Outer membrane usher protein CS557_09160 PF13953 PapC C-terminal domain CS557_09165 PF00419 Fimbrial protein CS557_09185 PF01979 Amidohydrolase family CS557_09190 PF00199 Catalase CS557_09195 PF03279 Bacterial lipid A biosynthesis acyltransferase CS557_09205 PF00313 'Cold-shock' DNA-binding domain CS557_09220 PF01553 Acyltransferase CS557_09225 PF01709 Transcriptional regulator CS557_09240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_09240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CS557_09250 PF00296 Luciferase-like monooxygenase CS557_09255 PF03180 NLPA lipoprotein CS557_09265 PF00528 Binding-protein-dependent transport system inner membrane component CS557_09270 PF06071 Protein of unknown function (DUF933) CS557_09270 PF01926 50S ribosome-binding GTPase CS557_09285 PF00027 Cyclic nucleotide-binding domain CS557_09285 PF13545 Crp-like helix-turn-helix domain CS557_09295 PF02222 ATP-grasp domain CS557_09300 PF01966 HD domain CS557_09300 PF08335 GlnD PII-uridylyltransferase CS557_09300 PF01909 Nucleotidyltransferase domain CS557_09305 PF00155 Aminotransferase class I and II CS557_09315 PF01037 Lrp/AsnC ligand binding domain CS557_09320 PF13533 Biotin-lipoyl like CS557_09325 PF00873 AcrB/AcrD/AcrF family CS557_09330 PF00255 Glutathione peroxidase CS557_09335 PF01641 SelR domain CS557_09340 PF00155 Aminotransferase class I and II CS557_09350 PF00710 Asparaginase, N-terminal CS557_09350 PF17763 Glutaminase/Asparaginase C-terminal domain CS557_09355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CS557_09355 PF02811 PHP domain CS557_09355 PF01336 OB-fold nucleic acid binding domain CS557_09355 PF07733 Bacterial DNA polymerase III alpha NTPase domain CS557_09355 PF14579 Helix-hairpin-helix motif CS557_09360 PF00588 SpoU rRNA Methylase family CS557_09365 PF00132 Bacterial transferase hexapeptide (six repeats) CS557_09375 PF00561 alpha/beta hydrolase fold CS557_09375 PF08386 TAP-like protein CS557_09380 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_09380 PF13192 Thioredoxin domain CS557_09390 PF05816 Toxic anion resistance protein (TelA) CS557_09415 PF02673 Bacitracin resistance protein BacA CS557_09425 PF00156 Phosphoribosyl transferase domain CS557_09430 PF02674 Colicin V production protein CS557_09435 PF01180 Dihydroorotate dehydrogenase CS557_09455 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CS557_09455 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CS557_09460 PF00881 Nitroreductase family CS557_09475 PF00162 Phosphoglycerate kinase CS557_09485 PF02545 Maf-like protein CS557_09490 PF07690 Major Facilitator Superfamily CS557_09530 PF00108 Thiolase, N-terminal domain CS557_09530 PF02803 Thiolase, C-terminal domain CS557_09545 PF03737 Aldolase/RraA CS557_09550 PF13460 NAD(P)H-binding CS557_09555 PF01649 Ribosomal protein S20 CS557_09560 PF12561 ToxR activated gene A lipoprotein domain CS557_09560 PF00041 Fibronectin type III domain CS557_09570 PF00459 Inositol monophosphatase family CS557_09575 PF13419 Haloacid dehalogenase-like hydrolase CS557_09580 PF01479 S4 domain CS557_09585 PF00154 recA bacterial DNA recombination protein CS557_09590 PF02631 RecX family CS557_09610 PF00216 Bacterial DNA-binding protein CS557_09625 PF02082 Transcriptional regulator CS557_09630 PF00266 Aminotransferase class-V CS557_09635 PF01592 NifU-like N terminal domain CS557_09640 PF01521 Iron-sulphur cluster biosynthesis CS557_09645 PF07743 HSCB C-terminal oligomerisation domain CS557_09645 PF00226 DnaJ domain CS557_09650 PF00012 Hsp70 protein CS557_09655 PF00111 2Fe-2S iron-sulfur cluster binding domain CS557_09660 PF00211 Adenylate and Guanylate cyclase catalytic domain CS557_09670 PF02559 CarD-like/TRCF domain CS557_09670 PF00270 DEAD/DEAH box helicase CS557_09670 PF03461 TRCF domain CS557_09670 PF17757 UvrB interaction domain CS557_09670 PF00271 Helicase conserved C-terminal domain CS557_09680 PF03466 LysR substrate binding domain CS557_09680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_09690 PF01810 LysE type translocator CS557_09695 PF03594 Benzoate membrane transport protein CS557_09700 PF02254 TrkA-N domain CS557_09700 PF00999 Sodium/hydrogen exchanger family CS557_09715 PF03313 Serine dehydratase alpha chain CS557_09715 PF03315 Serine dehydratase beta chain CS557_09720 PF11940 Domain of unknown function (DUF3458) Ig-like fold CS557_09720 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CS557_09720 PF01433 Peptidase family M1 domain CS557_09745 PF02110 Hydroxyethylthiazole kinase family CS557_09755 PF05970 PIF1-like helicase CS557_09755 PF14493 Helix-turn-helix domain CS557_09765 PF13520 Amino acid permease CS557_09770 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CS557_09775 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CS557_09780 PF13302 Acetyltransferase (GNAT) domain CS557_09785 PF02540 NAD synthase CS557_09785 PF00958 GMP synthase C terminal domain CS557_09785 PF00117 Glutamine amidotransferase class-I CS557_09790 PF00749 tRNA synthetases class I (E and Q), catalytic domain CS557_09790 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CS557_09795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CS557_09800 PF00149 Calcineurin-like phosphoesterase CS557_09805 PF00881 Nitroreductase family CS557_09815 PF17209 Hfq protein CS557_09825 PF08676 MutL C terminal dimerisation domain CS557_09825 PF01119 DNA mismatch repair protein, C-terminal domain CS557_09830 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CS557_09840 PF01479 S4 domain CS557_09840 PF00849 RNA pseudouridylate synthase CS557_09850 PF00583 Acetyltransferase (GNAT) family CS557_09855 PF01479 S4 domain CS557_09855 PF00849 RNA pseudouridylate synthase CS557_09865 PF00296 Luciferase-like monooxygenase CS557_09875 PF03618 Kinase/pyrophosphorylase CS557_09880 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CS557_09880 PF00391 PEP-utilising enzyme, mobile domain CS557_09880 PF02896 PEP-utilising enzyme, TIM barrel domain CS557_09890 PF06481 COX Aromatic Rich Motif CS557_09890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CS557_09895 PF00115 Cytochrome C and Quinol oxidase polypeptide I CS557_09900 PF00510 Cytochrome c oxidase subunit III CS557_09905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CS557_09910 PF01040 UbiA prenyltransferase family CS557_09925 PF01250 Ribosomal protein S6 CS557_09930 PF01084 Ribosomal protein S18 CS557_09935 PF03948 Ribosomal protein L9, C-terminal domain CS557_09935 PF01281 Ribosomal protein L9, N-terminal domain CS557_09940 PF00772 DnaB-like helicase N terminal domain CS557_09940 PF03796 DnaB-like helicase C terminal domain CS557_09945 PF00842 Alanine racemase, C-terminal domain CS557_09945 PF01168 Alanine racemase, N-terminal domain CS557_09955 PF08379 Bacterial transglutaminase-like N-terminal region CS557_09955 PF01841 Transglutaminase-like superfamily CS557_09965 PF14403 Circularly permuted ATP-grasp type 2 CS557_09975 PF00709 Adenylosuccinate synthetase CS557_09980 PF13393 Histidyl-tRNA synthetase CS557_09990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CS557_09990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CS557_09995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CS557_09995 PF01411 tRNA synthetases class II (A) CS557_09995 PF02272 DHHA1 domain CS557_10000 PF13840 ACT domain CS557_10000 PF00696 Amino acid kinase family CS557_10000 PF01842 ACT domain CS557_10005 PF02599 Global regulator protein family CS557_10010 PF01351 Ribonuclease HII CS557_10025 PF01292 Prokaryotic cytochrome b561 CS557_10030 PF00962 Adenosine/AMP deaminase CS557_10035 PF00860 Permease family CS557_10045 PF07715 TonB-dependent Receptor Plug Domain CS557_10045 PF00593 TonB dependent receptor CS557_10055 PF12833 Helix-turn-helix domain CS557_10055 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CS557_10065 PF00893 Small Multidrug Resistance protein CS557_10070 PF01134 Glucose inhibited division protein A CS557_10070 PF13932 GidA associated domain CS557_10090 PF02954 Bacterial regulatory protein, Fis family CS557_10095 PF01808 AICARFT/IMPCHase bienzyme CS557_10095 PF02142 MGS-like domain CS557_10100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CS557_10100 PF02843 Phosphoribosylglycinamide synthetase, C domain CS557_10100 PF02844 Phosphoribosylglycinamide synthetase, N domain CS557_10105 PF03180 NLPA lipoprotein CS557_10110 PF00005 ABC transporter CS557_10110 PF09383 NIL domain CS557_10115 PF00528 Binding-protein-dependent transport system inner membrane component CS557_10130 PF16123 Hydroxyacylglutathione hydrolase C-terminus CS557_10130 PF00753 Metallo-beta-lactamase superfamily CS557_10140 PF05221 S-adenosyl-L-homocysteine hydrolase CS557_10140 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CS557_10145 PF02219 Methylenetetrahydrofolate reductase CS557_10150 PF04452 RNA methyltransferase CS557_10155 PF00990 Diguanylate cyclase, GGDEF domain CS557_10155 PF03707 Bacterial signalling protein N terminal repeat CS557_10155 PF00563 EAL domain CS557_10160 PF01515 Phosphate acetyl/butaryl transferase CS557_10160 PF00390 Malic enzyme, N-terminal domain CS557_10160 PF03949 Malic enzyme, NAD binding domain CS557_10165 PF12627 Probable RNA and SrmB- binding site of polymerase A CS557_10165 PF01743 Poly A polymerase head domain CS557_10170 PF00889 Elongation factor TS CS557_10175 PF00318 Ribosomal protein S2 CS557_10180 PF00557 Metallopeptidase family M24 CS557_10190 PF07690 Major Facilitator Superfamily CS557_10200 PF17820 PDZ domain CS557_10200 PF13180 PDZ domain CS557_10205 PF01784 NIF3 (NGG1p interacting factor 3) CS557_10210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CS557_10210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CS557_10245 PF01040 UbiA prenyltransferase family CS557_10250 PF04345 Chorismate lyase CS557_10260 PF00117 Glutamine amidotransferase class-I CS557_10270 PF00111 2Fe-2S iron-sulfur cluster binding domain CS557_10270 PF03473 MOSC domain CS557_10270 PF03476 MOSC N-terminal beta barrel domain CS557_10275 PF00591 Glycosyl transferase family, a/b domain CS557_10275 PF02885 Glycosyl transferase family, helical bundle domain CS557_10280 PF00218 Indole-3-glycerol phosphate synthase CS557_10315 PF05675 Protein of unknown function (DUF817) CS557_10320 PF01208 Uroporphyrinogen decarboxylase (URO-D) CS557_10330 PF00360 Phytochrome region CS557_10330 PF00990 Diguanylate cyclase, GGDEF domain CS557_10330 PF00563 EAL domain CS557_10330 PF01590 GAF domain CS557_10335 PF01979 Amidohydrolase family CS557_10340 PF00929 Exonuclease CS557_10355 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_10355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CS557_10360 PF00005 ABC transporter CS557_10360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CS557_10365 PF12911 N-terminal TM domain of oligopeptide transport permease C CS557_10365 PF00528 Binding-protein-dependent transport system inner membrane component CS557_10370 PF00528 Binding-protein-dependent transport system inner membrane component CS557_10375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CS557_10380 PF01476 LysM domain CS557_10380 PF01464 Transglycosylase SLT domain CS557_10385 PF00929 Exonuclease CS557_10395 PF09297 NADH pyrophosphatase zinc ribbon domain CS557_10395 PF00293 NUDIX domain CS557_10405 PF04972 BON domain CS557_10410 PF02021 Uncharacterised protein family UPF0102 CS557_10420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CS557_10430 PF13411 MerR HTH family regulatory protein CS557_10440 PF01494 FAD binding domain CS557_10445 PF01494 FAD binding domain CS557_10450 PF05195 Aminopeptidase P, N-terminal domain CS557_10450 PF00557 Metallopeptidase family M24 CS557_10485 PF05762 VWA domain containing CoxE-like protein CS557_10495 PF07728 AAA domain (dynein-related subfamily) CS557_10500 PF13569 Domain of unknown function (DUF4132) CS557_10510 PF13018 Extended Signal Peptide of Type V secretion system CS557_10510 PF05658 Head domain of trimeric autotransporter adhesin CS557_10510 PF13018 Extended Signal Peptide of Type V secretion system CS557_10510 PF03895 YadA-like membrane anchor domain CS557_10510 PF05658 Head domain of trimeric autotransporter adhesin CS557_10510 PF05662 Coiled stalk of trimeric autotransporter adhesin CS557_10510 PF05662 Coiled stalk of trimeric autotransporter adhesin CS557_10510 PF03895 YadA-like membrane anchor domain CS557_10510 PF05658 Head domain of trimeric autotransporter adhesin CS557_10510 PF05662 Coiled stalk of trimeric autotransporter adhesin CS557_10510 PF13018 Extended Signal Peptide of Type V secretion system CS557_10510 PF03895 YadA-like membrane anchor domain CS557_10510 PF05658 Head domain of trimeric autotransporter adhesin CS557_10510 PF13018 Extended Signal Peptide of Type V secretion system CS557_10510 PF05662 Coiled stalk of trimeric autotransporter adhesin CS557_10510 PF03895 YadA-like membrane anchor domain CS557_10515 PF01812 5-formyltetrahydrofolate cyclo-ligase family CS557_10520 PF02190 ATP-dependent protease La (LON) substrate-binding domain CS557_10520 PF05362 Lon protease (S16) C-terminal proteolytic domain CS557_10520 PF00004 ATPase family associated with various cellular activities (AAA) CS557_10525 PF02590 Predicted SPOUT methyltransferase CS557_10530 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CS557_10540 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CS557_10540 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CS557_10545 PF04060 Putative Fe-S cluster CS557_10550 PF10576 Iron-sulfur binding domain of endonuclease III CS557_10550 PF00633 Helix-hairpin-helix motif CS557_10550 PF00730 HhH-GPD superfamily base excision DNA repair protein CS557_10560 PF05191 Adenylate kinase, active site lid CS557_10575 PF00905 Penicillin binding protein transpeptidase domain CS557_10575 PF03717 Penicillin-binding Protein dimerisation domain CS557_10605 PF01343 Peptidase family S49 CS557_10605 PF08496 Peptidase family S49 N-terminal CS557_10610 PF00005 ABC transporter CS557_10615 PF00528 Binding-protein-dependent transport system inner membrane component CS557_10620 PF00528 Binding-protein-dependent transport system inner membrane component CS557_10630 PF00355 Rieske [2Fe-2S] domain CS557_10635 PF00282 Pyridoxal-dependent decarboxylase conserved domain CS557_10640 PF00202 Aminotransferase class-III CS557_10650 PF00440 Bacterial regulatory proteins, tetR family CS557_10660 PF00487 Fatty acid desaturase CS557_10665 PF00970 Oxidoreductase FAD-binding domain CS557_10665 PF00111 2Fe-2S iron-sulfur cluster binding domain CS557_10665 PF00175 Oxidoreductase NAD-binding domain CS557_10670 PF00440 Bacterial regulatory proteins, tetR family CS557_10680 PF00210 Ferritin-like domain CS557_10685 PF00271 Helicase conserved C-terminal domain CS557_10685 PF12137 RNA polymerase recycling family C-terminal CS557_10685 PF18337 RapA N-terminal Tudor like domain CS557_10685 PF00176 SNF2 family N-terminal domain CS557_10685 PF18339 RapA N-terminal Tudor like domain 1 CS557_10690 PF00849 RNA pseudouridylate synthase CS557_10695 PF00202 Aminotransferase class-III CS557_10700 PF02581 Thiamine monophosphate synthase CS557_10725 PF01699 Sodium/calcium exchanger protein CS557_10730 PF00675 Insulinase (Peptidase family M16) CS557_10730 PF05193 Peptidase M16 inactive domain CS557_10735 PF02567 Phenazine biosynthesis-like protein CS557_10740 PF00180 Isocitrate/isopropylmalate dehydrogenase CS557_10745 PF00849 RNA pseudouridylate synthase CS557_10755 PF03971 Monomeric isocitrate dehydrogenase CS557_10765 PF07943 Penicillin-binding protein 5, C-terminal domain CS557_10765 PF00768 D-alanyl-D-alanine carboxypeptidase CS557_10770 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_10775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CS557_10780 PF03441 FAD binding domain of DNA photolyase CS557_10780 PF00875 DNA photolyase CS557_10810 PF02350 UDP-N-acetylglucosamine 2-epimerase CS557_10830 PF01654 Cytochrome bd terminal oxidase subunit I CS557_10835 PF02322 Cytochrome bd terminal oxidase subunit II CS557_10840 PF03060 Nitronate monooxygenase CS557_10845 PF13089 Polyphosphate kinase N-terminal domain CS557_10845 PF13090 Polyphosphate kinase C-terminal domain 2 CS557_10845 PF17941 Polyphosphate kinase C-terminal domain 1 CS557_10845 PF02503 Polyphosphate kinase middle domain CS557_10850 PF00912 Transglycosylase CS557_10855 PF01694 Rhomboid family CS557_10865 PF00005 ABC transporter CS557_10870 PF13472 GDSL-like Lipase/Acylhydrolase family CS557_10875 PF00484 Carbonic anhydrase CS557_10880 PF00561 alpha/beta hydrolase fold CS557_10890 PF07715 TonB-dependent Receptor Plug Domain CS557_10890 PF00593 TonB dependent receptor CS557_10895 PF01521 Iron-sulphur cluster biosynthesis CS557_10895 PF01106 NifU-like domain CS557_10915 PF00152 tRNA synthetases class II (D, K and N) CS557_10920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CS557_10920 PF11890 Domain of unknown function (DUF3410) CS557_10920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CS557_10925 PF01219 Prokaryotic diacylglycerol kinase CS557_10935 PF00118 TCP-1/cpn60 chaperonin family CS557_10940 PF00166 Chaperonin 10 Kd subunit CS557_10955 PF00781 Diacylglycerol kinase catalytic domain CS557_10960 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CS557_10960 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CS557_10965 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CS557_10965 PF01266 FAD dependent oxidoreductase CS557_10970 PF08220 DeoR-like helix-turn-helix domain CS557_10970 PF00455 DeoR C terminal sensor domain CS557_10975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CS557_10975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CS557_10985 PF14542 GCN5-related N-acetyl-transferase CS557_10995 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CS557_10995 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CS557_11010 PF09423 PhoD-like phosphatase CS557_11010 PF16655 PhoD-like phosphatase, N-terminal domain CS557_11025 PF00535 Glycosyl transferase family 2 CS557_11030 PF14883 Hypothetical glycosyl hydrolase family 13 CS557_11030 PF01522 Polysaccharide deacetylase CS557_11040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CS557_11045 PF07152 YaeQ protein CS557_11050 PF02492 CobW/HypB/UreG, nucleotide-binding domain CS557_11050 PF07683 Cobalamin synthesis protein cobW C-terminal domain CS557_11060 PF03061 Thioesterase superfamily CS557_11070 PF00206 Lyase CS557_11070 PF10415 Fumarase C C-terminus CS557_11075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_11075 PF03466 LysR substrate binding domain CS557_11080 PF00375 Sodium:dicarboxylate symporter family CS557_11090 PF03449 Transcription elongation factor, N-terminal CS557_11090 PF01272 Transcription elongation factor, GreA/GreB, C-term CS557_11095 PF00497 Bacterial extracellular solute-binding proteins, family 3 CS557_11095 PF01464 Transglycosylase SLT domain CS557_11105 PF01171 PP-loop family CS557_11110 PF01464 Transglycosylase SLT domain CS557_11115 PF01435 Peptidase family M48 CS557_11125 PF03448 MgtE intracellular N domain CS557_11125 PF01769 Divalent cation transporter CS557_11125 PF00571 CBS domain CS557_11130 PF00873 AcrB/AcrD/AcrF family CS557_11135 PF00884 Sulfatase CS557_11140 PF03009 Glycerophosphoryl diester phosphodiesterase family CS557_11145 PF04973 Nicotinamide mononucleotide transporter CS557_11165 PF12034 Domain of unknown function (DUF3520) CS557_11165 PF00092 von Willebrand factor type A domain CS557_11165 PF12450 von Willebrand factor CS557_11170 PF00809 Pterin binding enzyme CS557_11175 PF06480 FtsH Extracellular CS557_11175 PF00004 ATPase family associated with various cellular activities (AAA) CS557_11175 PF17862 AAA+ lid domain CS557_11175 PF01434 Peptidase family M41 CS557_11180 PF01728 FtsJ-like methyltransferase CS557_11185 PF01985 CRS1 / YhbY (CRM) domain CS557_11200 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CS557_11200 PF00117 Glutamine amidotransferase class-I CS557_11205 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CS557_11205 PF02142 MGS-like domain CS557_11205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CS557_11210 PF01272 Transcription elongation factor, GreA/GreB, C-term CS557_11210 PF03449 Transcription elongation factor, N-terminal CS557_11215 PF00132 Bacterial transferase hexapeptide (six repeats) CS557_11220 PF00582 Universal stress protein family CS557_11240 PF09587 Bacterial capsule synthesis protein PGA_cap CS557_11260 PF00999 Sodium/hydrogen exchanger family CS557_11265 PF04228 Putative neutral zinc metallopeptidase CS557_11270 PF05661 Protein of unknown function (DUF808) CS557_11275 PF00579 tRNA synthetases class I (W and Y) CS557_11280 PF07290 Protein of unknown function (DUF1449) CS557_11285 PF15975 Flotillin CS557_11285 PF01145 SPFH domain / Band 7 family CS557_11295 PF00535 Glycosyl transferase family 2 CS557_11300 PF14883 Hypothetical glycosyl hydrolase family 13 CS557_11300 PF01522 Polysaccharide deacetylase CS557_11310 PF00549 CoA-ligase CS557_11310 PF02629 CoA binding domain CS557_11315 PF08442 ATP-grasp domain CS557_11315 PF00549 CoA-ligase CS557_11320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CS557_11320 PF07992 Pyridine nucleotide-disulphide oxidoreductase CS557_11325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CS557_11325 PF02817 e3 binding domain CS557_11325 PF00364 Biotin-requiring enzyme CS557_11330 PF16078 2-oxoglutarate dehydrogenase N-terminus CS557_11330 PF00676 Dehydrogenase E1 component CS557_11330 PF16870 2-oxoglutarate dehydrogenase C-terminal CS557_11330 PF02779 Transketolase, pyrimidine binding domain CS557_11340 PF13085 2Fe-2S iron-sulfur cluster binding domain CS557_11345 PF02910 Fumarate reductase flavoprotein C-term CS557_11345 PF00890 FAD binding domain CS557_11350 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CS557_11355 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CS557_11360 PF00285 Citrate synthase, C-terminal domain CS557_11385 PF09335 SNARE associated Golgi protein CS557_11390 PF05724 Thiopurine S-methyltransferase (TPMT) CS557_11400 PF03466 LysR substrate binding domain CS557_11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_11420 PF04545 Sigma-70, region 4 CS557_11420 PF00140 Sigma-70 factor, region 1.2 CS557_11420 PF04542 Sigma-70 region 2 CS557_11420 PF03979 Sigma-70 factor, region 1.1 CS557_11420 PF04539 Sigma-70 region 3 CS557_11420 PF04546 Sigma-70, non-essential region CS557_11425 PF04359 Protein of unknown function (DUF493) CS557_11435 PF03099 Biotin/lipoate A/B protein ligase family CS557_11445 PF00465 Iron-containing alcohol dehydrogenase CS557_11450 PF13520 Amino acid permease CS557_11455 PF03358 NADPH-dependent FMN reductase CS557_11460 PF01638 HxlR-like helix-turn-helix CS557_11465 PF00588 SpoU rRNA Methylase family CS557_11470 PF14824 Sirohaem biosynthesis protein central CS557_11470 PF10414 Sirohaem synthase dimerisation region CS557_11470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CS557_11475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CS557_11475 PF02403 Seryl-tRNA synthetase N-terminal domain CS557_11485 PF03548 Outer membrane lipoprotein carrier protein LolA CS557_11490 PF02678 Pirin CS557_11490 PF05726 Pirin C-terminal cupin domain CS557_11495 PF01016 Ribosomal L27 protein CS557_11500 PF00829 Ribosomal prokaryotic L21 protein CS557_11505 PF00348 Polyprenyl synthetase CS557_11515 PF01569 PAP2 superfamily CS557_11520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CS557_11520 PF00529 HlyD membrane-fusion protein of T1SS CS557_11525 PF00873 AcrB/AcrD/AcrF family CS557_11530 PF02321 Outer membrane efflux protein CS557_11535 PF01906 Putative heavy-metal-binding CS557_11540 PF01906 Putative heavy-metal-binding CS557_11565 PF00133 tRNA synthetases class I (I, L, M and V) CS557_11565 PF10458 Valyl tRNA synthetase tRNA binding arm CS557_11565 PF08264 Anticodon-binding domain of tRNA CS557_11580 PF00909 Ammonium Transporter Family CS557_11595 PF08521 Two-component sensor kinase N-terminal CS557_11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_11595 PF00512 His Kinase A (phospho-acceptor) domain CS557_11600 PF00486 Transcriptional regulatory protein, C terminal CS557_11600 PF00072 Response regulator receiver domain CS557_11605 PF08019 Phosphoethanolamine transferase EptA/EptB CS557_11605 PF00884 Sulfatase CS557_11625 PF01734 Patatin-like phospholipase CS557_11635 PF01145 SPFH domain / Band 7 family CS557_11640 PF12823 Domain of unknown function (DUF3817) CS557_11645 PF00348 Polyprenyl synthetase CS557_11650 PF04303 PrpF protein CS557_11655 PF00324 Amino acid permease CS557_11670 PF00120 Glutamine synthetase, catalytic domain CS557_11675 PF01569 PAP2 superfamily CS557_11685 PF03600 Citrate transporter CS557_11690 PF00171 Aldehyde dehydrogenase family CS557_11695 PF00072 Response regulator receiver domain CS557_11695 PF00486 Transcriptional regulatory protein, C terminal CS557_11700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_11700 PF13493 Domain of unknown function (DUF4118) CS557_11700 PF00512 His Kinase A (phospho-acceptor) domain CS557_11700 PF02702 Osmosensitive K+ channel His kinase sensor domain CS557_11705 PF02669 K+-transporting ATPase, c chain CS557_11715 PF03814 Potassium-transporting ATPase A subunit CS557_11735 PF01507 Phosphoadenosine phosphosulfate reductase family CS557_11740 PF06974 Protein of unknown function (DUF1298) CS557_11740 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain CS557_11750 PF00575 S1 RNA binding domain CS557_11750 PF10150 Ribonuclease E/G family CS557_11755 PF02545 Maf-like protein CS557_11765 PF04085 rod shape-determining protein MreC CS557_11775 PF02686 Glu-tRNAGln amidotransferase C subunit CS557_11780 PF01425 Amidase CS557_11785 PF02934 GatB/GatE catalytic domain CS557_11785 PF02637 GatB domain CS557_11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_11825 PF03466 LysR substrate binding domain CS557_11840 PF05992 SbmA/BacA-like family CS557_11845 PF01734 Patatin-like phospholipase CS557_11850 PF01235 Sodium:alanine symporter family CS557_11855 PF03616 Sodium/glutamate symporter CS557_11865 PF00881 Nitroreductase family CS557_11870 PF07690 Major Facilitator Superfamily CS557_11875 PF12805 FUSC-like inner membrane protein yccS CS557_11885 PF00175 Oxidoreductase NAD-binding domain CS557_11885 PF00258 Flavodoxin CS557_11885 PF00667 FAD binding domain CS557_11930 PF03734 L,D-transpeptidase catalytic domain CS557_11930 PF17969 L,D-transpeptidase C-terminal domain CS557_11935 PF04304 Protein of unknown function (DUF454) CS557_11945 PF08085 Entericidin EcnA/B family CS557_11950 PF07687 Peptidase dimerisation domain CS557_11950 PF01546 Peptidase family M20/M25/M40 CS557_11960 PF01627 Hpt domain CS557_11960 PF02895 Signal transducing histidine kinase, homodimeric domain CS557_11960 PF07194 P2 response regulator binding domain CS557_11960 PF01584 CheW-like domain CS557_11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_11960 PF07194 P2 response regulator binding domain CS557_11960 PF01584 CheW-like domain CS557_11960 PF02895 Signal transducing histidine kinase, homodimeric domain CS557_11960 PF01627 Hpt domain CS557_11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_11965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CS557_11965 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CS557_11970 PF01584 CheW-like domain CS557_11975 PF00072 Response regulator receiver domain CS557_11980 PF00072 Response regulator receiver domain CS557_11990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CS557_11990 PF04073 Aminoacyl-tRNA editing domain CS557_11990 PF03129 Anticodon binding domain CS557_11995 PF07411 Domain of unknown function (DUF1508) CS557_12000 PF03831 PhnA domain CS557_12000 PF08274 PhnA Zinc-Ribbon CS557_12005 PF04343 Protein of unknown function, DUF488 CS557_12015 PF01571 Aminomethyltransferase folate-binding domain CS557_12030 PF07715 TonB-dependent Receptor Plug Domain CS557_12030 PF00593 TonB dependent receptor CS557_12035 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CS557_12035 PF06827 Zinc finger found in FPG and IleRS CS557_12035 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CS557_12040 PF00639 PPIC-type PPIASE domain CS557_12040 PF09312 SurA N-terminal domain CS557_12050 PF01741 Large-conductance mechanosensitive channel, MscL CS557_12060 PF00860 Permease family CS557_12065 PF05175 Methyltransferase small domain CS557_12065 PF08468 Methyltransferase small domain N-terminal CS557_12070 PF00324 Amino acid permease CS557_12075 PF01139 tRNA-splicing ligase RtcB CS557_12080 PF13505 Outer membrane protein beta-barrel domain CS557_12080 PF00691 OmpA family CS557_12090 PF02803 Thiolase, C-terminal domain CS557_12090 PF00108 Thiolase, N-terminal domain CS557_12100 PF00893 Small Multidrug Resistance protein CS557_12110 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CS557_12110 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CS557_12115 PF01011 PQQ enzyme repeat CS557_12120 PF04966 Carbohydrate-selective porin, OprB family CS557_12125 PF02515 CoA-transferase family III CS557_12130 PF12833 Helix-turn-helix domain CS557_12130 PF02311 AraC-like ligand binding domain CS557_12145 PF02803 Thiolase, C-terminal domain CS557_12145 PF00108 Thiolase, N-terminal domain CS557_12150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CS557_12150 PF00378 Enoyl-CoA hydratase/isomerase CS557_12150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CS557_12180 PF03006 Haemolysin-III related CS557_12185 PF00083 Sugar (and other) transporter CS557_12185 PF07690 Major Facilitator Superfamily CS557_12200 PF07517 SecA DEAD-like domain CS557_12200 PF02810 SEC-C motif CS557_12200 PF01043 SecA preprotein cross-linking domain CS557_12200 PF07516 SecA Wing and Scaffold domain CS557_12205 PF10417 C-terminal domain of 1-Cys peroxiredoxin CS557_12205 PF00578 AhpC/TSA family CS557_12210 PF00753 Metallo-beta-lactamase superfamily CS557_12230 PF02875 Mur ligase family, glutamate ligase domain CS557_12230 PF08245 Mur ligase middle domain CS557_12235 PF01039 Carboxyl transferase domain CS557_12240 PF00290 Tryptophan synthase alpha chain CS557_12265 PF00149 Calcineurin-like phosphoesterase CS557_12275 PF00291 Pyridoxal-phosphate dependent enzyme CS557_12280 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CS557_12285 PF00593 TonB dependent receptor CS557_12285 PF07715 TonB-dependent Receptor Plug Domain CS557_12290 PF01923 Cobalamin adenosyltransferase CS557_12310 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CS557_12325 PF00486 Transcriptional regulatory protein, C terminal CS557_12325 PF00072 Response regulator receiver domain CS557_12330 PF00672 HAMP domain CS557_12330 PF00512 His Kinase A (phospho-acceptor) domain CS557_12330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_12340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_12340 PF12806 Acetyl-CoA dehydrogenase C-terminal like CS557_12340 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_12340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_12345 PF12806 Acetyl-CoA dehydrogenase C-terminal like CS557_12345 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_12345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_12345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_12375 PF06146 Phosphate-starvation-inducible E CS557_12400 PF00593 TonB dependent receptor CS557_12400 PF07715 TonB-dependent Receptor Plug Domain CS557_12410 PF00152 tRNA synthetases class II (D, K and N) CS557_12410 PF02938 GAD domain CS557_12410 PF01336 OB-fold nucleic acid binding domain CS557_12425 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CS557_12440 PF01757 Acyltransferase family CS557_12455 PF17103 Stealth protein CR4, conserved region 4 CS557_12455 PF11380 Stealth protein CR2, conserved region 2 CS557_12455 PF17101 Stealth protein CR1, conserved region 1 CS557_12455 PF17102 Stealth protein CR3, conserved region 3 CS557_12465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CS557_12465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CS557_12470 PF01063 Amino-transferase class IV CS557_12475 PF08335 GlnD PII-uridylyltransferase CS557_12475 PF03710 Glutamate-ammonia ligase adenylyltransferase CS557_12480 PF00072 Response regulator receiver domain CS557_12480 PF09456 RcsC Alpha-Beta-Loop (ABL) CS557_12480 PF00512 His Kinase A (phospho-acceptor) domain CS557_12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_12550 PF10122 Mu-like prophage protein Com CS557_12640 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CS557_12645 PF07927 HicA toxin of bacterial toxin-antitoxin, CS557_12740 PF02547 Queuosine biosynthesis protein CS557_12755 PF01702 Queuine tRNA-ribosyltransferase CS557_12760 PF02699 Preprotein translocase subunit CS557_12765 PF13721 SecD export protein N-terminal TM region CS557_12765 PF02355 Protein export membrane protein CS557_12765 PF07549 SecD/SecF GG Motif CS557_12770 PF07549 SecD/SecF GG Motif CS557_12770 PF02355 Protein export membrane protein CS557_12780 PF01926 50S ribosome-binding GTPase CS557_12780 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CS557_12785 PF13360 PQQ-like domain CS557_12795 PF03129 Anticodon binding domain CS557_12795 PF13393 Histidyl-tRNA synthetase CS557_12800 PF04551 GcpE protein CS557_12815 PF04055 Radical SAM superfamily CS557_12820 PF00334 Nucleoside diphosphate kinase CS557_12825 PF04384 Iron-sulphur cluster assembly CS557_12830 PF01569 PAP2 superfamily CS557_12835 PF00534 Glycosyl transferases group 1 CS557_12835 PF13439 Glycosyltransferase Family 4 CS557_12840 PF00149 Calcineurin-like phosphoesterase CS557_12845 PF00398 Ribosomal RNA adenine dimethylase CS557_12850 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CS557_12860 PF00572 Ribosomal protein L13 CS557_12865 PF00380 Ribosomal protein S9/S16 CS557_12875 PF02798 Glutathione S-transferase, N-terminal domain CS557_12875 PF00043 Glutathione S-transferase, C-terminal domain CS557_12880 PF04386 Stringent starvation protein B CS557_12910 PF03372 Endonuclease/Exonuclease/phosphatase family CS557_12925 PF00364 Biotin-requiring enzyme CS557_12925 PF02785 Biotin carboxylase C-terminal domain CS557_12925 PF00289 Biotin carboxylase, N-terminal domain CS557_12925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CS557_12935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_12935 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_12935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_12940 PF01039 Carboxyl transferase domain CS557_12955 PF17932 Tetracyclin repressor-like, C-terminal domain CS557_12955 PF00440 Bacterial regulatory proteins, tetR family CS557_12965 PF13302 Acetyltransferase (GNAT) domain CS557_12970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_12970 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_12970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_12975 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_12975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_12975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_13020 PF01066 CDP-alcohol phosphatidyltransferase CS557_13025 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CS557_13045 PF00056 lactate/malate dehydrogenase, NAD binding domain CS557_13045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CS557_13055 PF01464 Transglycosylase SLT domain CS557_13055 PF10145 Phage-related minor tail protein CS557_13055 PF01551 Peptidase family M23 CS557_13060 PF04055 Radical SAM superfamily CS557_13060 PF01938 TRAM domain CS557_13060 PF00919 Uncharacterized protein family UPF0004 CS557_13065 PF02562 PhoH-like protein CS557_13070 PF02130 Uncharacterized protein family UPF0054 CS557_13080 PF00593 TonB dependent receptor CS557_13080 PF07715 TonB-dependent Receptor Plug Domain CS557_13105 PF00303 Thymidylate synthase CS557_13110 PF00186 Dihydrofolate reductase CS557_13125 PF01625 Peptide methionine sulfoxide reductase CS557_13135 PF01618 MotA/TolQ/ExbB proton channel family CS557_13145 PF00551 Formyl transferase CS557_13145 PF01842 ACT domain CS557_13150 PF08360 QacR-like protein, C-terminal region CS557_13150 PF00440 Bacterial regulatory proteins, tetR family CS557_13155 PF00171 Aldehyde dehydrogenase family CS557_13160 PF00830 Ribosomal L28 family CS557_13165 PF00471 Ribosomal protein L33 CS557_13170 PF02254 TrkA-N domain CS557_13170 PF00999 Sodium/hydrogen exchanger family CS557_13190 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CS557_13195 PF13361 UvrD-like helicase C-terminal domain CS557_13195 PF00580 UvrD/REP helicase N-terminal domain CS557_13210 PF01751 Toprim domain CS557_13210 PF01131 DNA topoisomerase CS557_13210 PF08272 Topoisomerase I zinc-ribbon-like CS557_13210 PF01396 Topoisomerase DNA binding C4 zinc finger CS557_13220 PF01638 HxlR-like helix-turn-helix CS557_13225 PF00107 Zinc-binding dehydrogenase CS557_13225 PF08240 Alcohol dehydrogenase GroES-like domain CS557_13245 PF03279 Bacterial lipid A biosynthesis acyltransferase CS557_13275 PF01118 Semialdehyde dehydrogenase, NAD binding domain CS557_13275 PF02774 Semialdehyde dehydrogenase, dimerisation domain CS557_13295 PF01416 tRNA pseudouridine synthase CS557_13305 PF01176 Translation initiation factor 1A / IF-1 CS557_13320 PF00180 Isocitrate/isopropylmalate dehydrogenase CS557_13330 PF00694 Aconitase C-terminal domain CS557_13335 PF00330 Aconitase family (aconitate hydratase) CS557_13345 PF03466 LysR substrate binding domain CS557_13345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_13370 PF00293 NUDIX domain CS557_13375 PF05524 PEP-utilising enzyme, N-terminal CS557_13375 PF00391 PEP-utilising enzyme, mobile domain CS557_13375 PF02896 PEP-utilising enzyme, TIM barrel domain CS557_13375 PF01590 GAF domain CS557_13385 PF00141 Peroxidase CS557_13390 PF04134 Protein of unknown function, DUF393 CS557_13400 PF12706 Beta-lactamase superfamily domain CS557_13405 PF03466 LysR substrate binding domain CS557_13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_13420 PF13419 Haloacid dehalogenase-like hydrolase CS557_13425 PF01479 S4 domain CS557_13425 PF00849 RNA pseudouridylate synthase CS557_13435 PF00575 S1 RNA binding domain CS557_13435 PF12111 Polyribonucleotide phosphorylase C terminal CS557_13435 PF10150 Ribonuclease E/G family CS557_13440 PF00501 AMP-binding enzyme CS557_13440 PF13193 AMP-binding enzyme C-terminal domain CS557_13460 PF06969 HemN C-terminal domain CS557_13460 PF04055 Radical SAM superfamily CS557_13470 PF01554 MatE CS557_13475 PF03109 ABC1 family CS557_13480 PF01197 Ribosomal protein L31 CS557_13490 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CS557_13505 PF01613 Flavin reductase like domain CS557_13515 PF00375 Sodium:dicarboxylate symporter family CS557_13530 PF03884 DNA gyrase inhibitor YacG CS557_13535 PF00753 Metallo-beta-lactamase superfamily CS557_13540 PF00762 Ferrochelatase CS557_13550 PF01177 Asp/Glu/Hydantoin racemase CS557_13570 PF08281 Sigma-70, region 4 CS557_13570 PF04542 Sigma-70 region 2 CS557_13580 PF05114 Protein of unknown function (DUF692) CS557_13595 PF01810 LysE type translocator CS557_13600 PF01206 Sulfurtransferase TusA CS557_13605 PF03471 Transporter associated domain CS557_13605 PF00571 CBS domain CS557_13610 PF00795 Carbon-nitrogen hydrolase CS557_13620 PF08334 Type II secretion system (T2SS), protein G CS557_13620 PF07963 Prokaryotic N-terminal methylation motif CS557_13625 PF00482 Type II secretion system (T2SS), protein F CS557_13630 PF00270 DEAD/DEAH box helicase CS557_13630 PF00271 Helicase conserved C-terminal domain CS557_13630 PF17764 3′ DNA-binding domain (3′BD) CS557_13630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CS557_13630 PF18074 Primosomal protein N C-terminal domain CS557_13635 PF02254 TrkA-N domain CS557_13635 PF00999 Sodium/hydrogen exchanger family CS557_13640 PF01430 Hsp33 protein CS557_13645 PF01556 DnaJ C terminal domain CS557_13645 PF00226 DnaJ domain CS557_13655 PF01544 CorA-like Mg2+ transporter protein CS557_13660 PF00575 S1 RNA binding domain CS557_13660 PF01138 3' exoribonuclease family, domain 1 CS557_13660 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CS557_13660 PF00013 KH domain CS557_13660 PF03725 3' exoribonuclease family, domain 2 CS557_13665 PF00312 Ribosomal protein S15 CS557_13675 PF13538 UvrD-like helicase C-terminal domain CS557_13680 PF13361 UvrD-like helicase C-terminal domain CS557_13680 PF00580 UvrD/REP helicase N-terminal domain CS557_13680 PF12705 PD-(D/E)XK nuclease superfamily CS557_13685 PF17946 RecC C-terminal domain CS557_13700 PF03976 Polyphosphate kinase 2 (PPK2) CS557_13710 PF01209 ubiE/COQ5 methyltransferase family CS557_13720 PF03109 ABC1 family CS557_13725 PF01494 FAD binding domain CS557_13730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CS557_13740 PF01502 Phosphoribosyl-AMP cyclohydrolase CS557_13755 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CS557_13755 PF13244 Domain of unknown function (DUF4040) CS557_13755 PF00361 Proton-conducting membrane transporter CS557_13755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CS557_13760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CS557_13765 PF00361 Proton-conducting membrane transporter CS557_13775 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CS557_13785 PF02033 Ribosome-binding factor A CS557_13790 PF04760 Translation initiation factor IF-2, N-terminal region CS557_13790 PF08364 Bacterial translation initiation factor IF-2 associated region CS557_13790 PF00009 Elongation factor Tu GTP binding domain CS557_13790 PF11987 Translation-initiation factor 2 CS557_13795 PF00575 S1 RNA binding domain CS557_13795 PF08529 NusA N-terminal domain CS557_13795 PF13184 NusA-like KH domain CS557_13800 PF17384 RimP C-terminal SH3 domain CS557_13800 PF02576 RimP N-terminal domain CS557_13820 PF03840 Preprotein translocase SecG subunit CS557_13825 PF00121 Triosephosphate isomerase CS557_13830 PF00437 Type II/IV secretion system protein CS557_13830 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CS557_13835 PF00482 Type II secretion system (T2SS), protein F CS557_13840 PF06750 Bacterial Peptidase A24 N-terminal domain CS557_13840 PF01478 Type IV leader peptidase family CS557_13845 PF01121 Dephospho-CoA kinase CS557_13855 PF00588 SpoU rRNA Methylase family CS557_13855 PF08032 RNA 2'-O ribose methyltransferase substrate binding CS557_13860 PF06865 Pyrimidine/purine nucleoside phosphorylase CS557_13865 PF02463 RecF/RecN/SMC N terminal domain CS557_13870 PF02622 Uncharacterized ACR, COG1678 CS557_13875 PF03652 Holliday junction resolvase CS557_13880 PF13533 Biotin-lipoyl like CS557_13900 PF01066 CDP-alcohol phosphatidyltransferase CS557_13910 PF08459 UvrC Helix-hairpin-helix N-terminal CS557_13910 PF01541 GIY-YIG catalytic domain CS557_13910 PF02151 UvrB/uvrC motif CS557_13930 PF00990 Diguanylate cyclase, GGDEF domain CS557_13940 PF00378 Enoyl-CoA hydratase/isomerase CS557_13940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CS557_13940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CS557_13945 PF00108 Thiolase, N-terminal domain CS557_13945 PF02803 Thiolase, C-terminal domain CS557_13950 PF11724 YvbH-like oligomerisation region CS557_13950 PF08000 Bacterial PH domain CS557_13965 PF00005 ABC transporter CS557_13965 PF00664 ABC transporter transmembrane region CS557_13975 PF01323 DSBA-like thioredoxin domain CS557_13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_13995 PF00183 Hsp90 protein CS557_14010 PF13726 Na+-H+ antiporter family CS557_14010 PF03553 Na+/H+ antiporter family CS557_14030 PF04997 RNA polymerase Rpb1, domain 1 CS557_14030 PF04983 RNA polymerase Rpb1, domain 3 CS557_14030 PF05000 RNA polymerase Rpb1, domain 4 CS557_14030 PF04998 RNA polymerase Rpb1, domain 5 CS557_14030 PF00623 RNA polymerase Rpb1, domain 2 CS557_14035 PF04563 RNA polymerase beta subunit CS557_14035 PF04561 RNA polymerase Rpb2, domain 2 CS557_14035 PF04560 RNA polymerase Rpb2, domain 7 CS557_14035 PF00562 RNA polymerase Rpb2, domain 6 CS557_14035 PF10385 RNA polymerase beta subunit external 1 domain CS557_14035 PF04565 RNA polymerase Rpb2, domain 3 CS557_14040 PF00542 Ribosomal protein L7/L12 C-terminal domain CS557_14040 PF16320 Ribosomal protein L7/L12 dimerisation domain CS557_14045 PF00466 Ribosomal protein L10 CS557_14050 PF00687 Ribosomal protein L1p/L10e family CS557_14055 PF00298 Ribosomal protein L11, RNA binding domain CS557_14055 PF03946 Ribosomal protein L11, N-terminal domain CS557_14060 PF00467 KOW motif CS557_14060 PF02357 Transcription termination factor nusG CS557_14065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CS557_14075 PF03143 Elongation factor Tu C-terminal domain CS557_14075 PF03144 Elongation factor Tu domain 2 CS557_14075 PF00009 Elongation factor Tu GTP binding domain CS557_14100 PF04715 Anthranilate synthase component I, N terminal region CS557_14100 PF00425 chorismate binding enzyme CS557_14105 PF13419 Haloacid dehalogenase-like hydrolase CS557_14110 PF00498 FHA domain CS557_14110 PF12401 Protein of unknown function (DUF2662) CS557_14115 PF03958 Bacterial type II/III secretion system short domain CS557_14115 PF00263 Bacterial type II and III secretion system protein CS557_14130 PF00816 H-NS histone family CS557_14155 PF03900 Porphobilinogen deaminase, C-terminal domain CS557_14155 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CS557_14160 PF00072 Response regulator receiver domain CS557_14160 PF04397 LytTr DNA-binding domain CS557_14165 PF06580 Histidine kinase CS557_14165 PF07694 5TMR of 5TMR-LYT CS557_14165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_14170 PF14698 Argininosuccinate lyase C-terminal CS557_14170 PF00206 Lyase CS557_14175 PF04362 Bacterial Fe(2+) trafficking CS557_14185 PF01895 PhoU domain CS557_14190 PF01964 Radical SAM ThiC family CS557_14190 PF13667 ThiC-associated domain CS557_14200 PF00149 Calcineurin-like phosphoesterase CS557_14205 PF01258 Prokaryotic dksA/traR C4-type zinc finger CS557_14210 PF00749 tRNA synthetases class I (E and Q), catalytic domain CS557_14215 PF01098 Cell cycle protein CS557_14220 PF08245 Mur ligase middle domain CS557_14220 PF02875 Mur ligase family, glutamate ligase domain CS557_14230 PF02421 Ferrous iron transport protein B CS557_14230 PF07670 Nucleoside recognition CS557_14230 PF07664 Ferrous iron transport protein B C terminus CS557_14240 PF02899 Phage integrase, N-terminal SAM-like domain CS557_14240 PF00589 Phage integrase family CS557_14245 PF13098 Thioredoxin-like domain CS557_14245 PF10411 Disulfide bond isomerase protein N-terminus CS557_14250 PF03447 Homoserine dehydrogenase, NAD binding domain CS557_14250 PF00742 Homoserine dehydrogenase CS557_14250 PF01842 ACT domain CS557_14255 PF00291 Pyridoxal-phosphate dependent enzyme CS557_14270 PF00768 D-alanyl-D-alanine carboxypeptidase CS557_14275 PF00196 Bacterial regulatory proteins, luxR family CS557_14275 PF00072 Response regulator receiver domain CS557_14280 PF00512 His Kinase A (phospho-acceptor) domain CS557_14280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_14285 PF02954 Bacterial regulatory protein, Fis family CS557_14285 PF00072 Response regulator receiver domain CS557_14285 PF00158 Sigma-54 interaction domain CS557_14290 PF17820 PDZ domain CS557_14290 PF01471 Putative peptidoglycan binding domain CS557_14290 PF03572 Peptidase family S41 CS557_14295 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CS557_14295 PF01676 Metalloenzyme superfamily CS557_14300 PF03739 Lipopolysaccharide export system permease LptF/LptG CS557_14305 PF03739 Lipopolysaccharide export system permease LptF/LptG CS557_14310 PF02789 Cytosol aminopeptidase family, N-terminal domain CS557_14310 PF00883 Cytosol aminopeptidase family, catalytic domain CS557_14325 PF00677 Lumazine binding domain CS557_14330 PF00230 Major intrinsic protein CS557_14340 PF01872 RibD C-terminal domain CS557_14340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CS557_14345 PF03477 ATP cone domain CS557_14350 PF00909 Ammonium Transporter Family CS557_14355 PF00543 Nitrogen regulatory protein P-II CS557_14365 PF13335 Magnesium chelatase, subunit ChlI C-terminal CS557_14365 PF01078 Magnesium chelatase, subunit ChlI CS557_14385 PF00719 Inorganic pyrophosphatase CS557_14400 PF00501 AMP-binding enzyme CS557_14400 PF13193 AMP-binding enzyme C-terminal domain CS557_14405 PF03989 DNA gyrase C-terminal domain, beta-propeller CS557_14405 PF00521 DNA gyrase/topoisomerase IV, subunit A CS557_14415 PF03458 UPF0126 domain CS557_14420 PF02810 SEC-C motif CS557_14425 PF03741 Integral membrane protein TerC family CS557_14425 PF03471 Transporter associated domain CS557_14435 PF03641 Possible lysine decarboxylase CS557_14445 PF07690 Major Facilitator Superfamily CS557_14460 PF11798 IMS family HHH motif CS557_14460 PF00817 impB/mucB/samB family CS557_14460 PF11799 impB/mucB/samB family C-terminal domain CS557_14465 PF00486 Transcriptional regulatory protein, C terminal CS557_14465 PF00072 Response regulator receiver domain CS557_14470 PF00672 HAMP domain CS557_14470 PF00512 His Kinase A (phospho-acceptor) domain CS557_14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_14475 PF06123 Inner membrane protein CreD CS557_14495 PF11842 Domain of unknown function (DUF3362) CS557_14495 PF04055 Radical SAM superfamily CS557_14495 PF08497 Radical SAM N-terminal CS557_14500 PF07690 Major Facilitator Superfamily CS557_14520 PF03358 NADPH-dependent FMN reductase CS557_14540 PF00291 Pyridoxal-phosphate dependent enzyme CS557_14575 PF02028 BCCT, betaine/carnitine/choline family transporter CS557_14595 PF00474 Sodium:solute symporter family CS557_14600 PF04341 Protein of unknown function, DUF485 CS557_14605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CS557_14605 PF00512 His Kinase A (phospho-acceptor) domain CS557_14605 PF09308 LuxQ, periplasmic CS557_14605 PF00072 Response regulator receiver domain CS557_14625 PF01327 Polypeptide deformylase CS557_14630 PF01476 LysM domain CS557_14635 PF17782 DprA winged helix domain CS557_14635 PF02481 DNA recombination-mediator protein A CS557_14640 PF01300 Telomere recombination CS557_14650 PF00440 Bacterial regulatory proteins, tetR family CS557_14655 PF07690 Major Facilitator Superfamily CS557_14665 PF00255 Glutathione peroxidase CS557_14675 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CS557_14680 PF02874 ATP synthase alpha/beta family, beta-barrel domain CS557_14680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CS557_14685 PF00231 ATP synthase CS557_14690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CS557_14690 PF00306 ATP synthase alpha/beta chain, C terminal domain CS557_14690 PF02874 ATP synthase alpha/beta family, beta-barrel domain CS557_14695 PF00213 ATP synthase delta (OSCP) subunit CS557_14700 PF00430 ATP synthase B/B' CF(0) CS557_14705 PF00137 ATP synthase subunit C CS557_14710 PF00119 ATP synthase A chain CS557_14720 PF01297 Zinc-uptake complex component A periplasmic CS557_14730 PF00005 ABC transporter CS557_14735 PF00950 ABC 3 transport family CS557_14740 PF01810 LysE type translocator CS557_14745 PF04261 Dyp-type peroxidase family CS557_14750 PF03949 Malic enzyme, NAD binding domain CS557_14750 PF00390 Malic enzyme, N-terminal domain CS557_14755 PF00750 tRNA synthetases class I (R) CS557_14755 PF05746 DALR anticodon binding domain CS557_14755 PF03485 Arginyl tRNA synthetase N terminal domain CS557_14775 PF02678 Pirin CS557_14775 PF05726 Pirin C-terminal cupin domain CS557_14785 PF00117 Glutamine amidotransferase class-I CS557_14785 PF00958 GMP synthase C terminal domain CS557_14785 PF02540 NAD synthase CS557_14790 PF04286 Protein of unknown function (DUF445) CS557_14800 PF07681 DoxX CS557_14805 PF09335 SNARE associated Golgi protein CS557_14820 PF13614 AAA domain CS557_14830 PF01722 BolA-like protein CS557_14845 PF00083 Sugar (and other) transporter CS557_14845 PF07690 Major Facilitator Superfamily CS557_14850 PF00378 Enoyl-CoA hydratase/isomerase CS557_14855 PF00378 Enoyl-CoA hydratase/isomerase CS557_14860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_14860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_14860 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_14865 PF13193 AMP-binding enzyme C-terminal domain CS557_14865 PF00501 AMP-binding enzyme CS557_14870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CS557_14870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CS557_14875 PF00171 Aldehyde dehydrogenase family CS557_14885 PF00324 Amino acid permease CS557_14890 PF01042 Endoribonuclease L-PSP CS557_14895 PF01168 Alanine racemase, N-terminal domain CS557_14895 PF00842 Alanine racemase, C-terminal domain CS557_14900 PF01266 FAD dependent oxidoreductase CS557_14905 PF01037 Lrp/AsnC ligand binding domain CS557_14925 PF00849 RNA pseudouridylate synthase CS557_14945 PF02311 AraC-like ligand binding domain CS557_14945 PF12833 Helix-turn-helix domain CS557_14970 PF00330 Aconitase family (aconitate hydratase) CS557_14970 PF00694 Aconitase C-terminal domain CS557_14975 PF00285 Citrate synthase, C-terminal domain CS557_14985 PF00392 Bacterial regulatory proteins, gntR family CS557_14985 PF07729 FCD domain CS557_14990 PF00155 Aminotransferase class I and II CS557_14995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CS557_14995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CS557_14995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CS557_14995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CS557_15000 PF00342 Phosphoglucose isomerase CS557_15005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CS557_15005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CS557_15005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CS557_15010 PF00483 Nucleotidyl transferase CS557_15015 PF02719 Polysaccharide biosynthesis protein CS557_15025 PF00953 Glycosyl transferase family 4 CS557_15030 PF01370 NAD dependent epimerase/dehydratase family CS557_15035 PF13579 Glycosyl transferase 4-like domain CS557_15040 PF02350 UDP-N-acetylglucosamine 2-epimerase CS557_15045 PF01370 NAD dependent epimerase/dehydratase family CS557_15050 PF01757 Acyltransferase family CS557_15055 PF02719 Polysaccharide biosynthesis protein CS557_15055 PF08485 Polysaccharide biosynthesis protein C-terminal CS557_15060 PF00534 Glycosyl transferases group 1 CS557_15060 PF13439 Glycosyltransferase Family 4 CS557_15070 PF00132 Bacterial transferase hexapeptide (six repeats) CS557_15085 PF01370 NAD dependent epimerase/dehydratase family CS557_15090 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CS557_15090 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CS557_15090 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CS557_15095 PF02563 Polysaccharide biosynthesis/export protein CS557_15095 PF10531 SLBB domain CS557_15095 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CS557_15100 PF01451 Low molecular weight phosphotyrosine protein phosphatase CS557_15105 PF13807 G-rich domain on putative tyrosine kinase CS557_15105 PF13614 AAA domain CS557_15105 PF02706 Chain length determinant protein CS557_15110 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CS557_15110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CS557_15115 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CS557_15115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CS557_15120 PF03023 Lipid II flippase MurJ CS557_15125 PF01510 N-acetylmuramoyl-L-alanine amidase CS557_15130 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CS557_15130 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CS557_15140 PF05506 Domain of unknown function (DUF756) CS557_15140 PF04185 Phosphoesterase family CS557_15145 PF03725 3' exoribonuclease family, domain 2 CS557_15145 PF01138 3' exoribonuclease family, domain 1 CS557_15150 PF00487 Fatty acid desaturase CS557_15155 PF00970 Oxidoreductase FAD-binding domain CS557_15155 PF00111 2Fe-2S iron-sulfur cluster binding domain CS557_15155 PF00175 Oxidoreductase NAD-binding domain CS557_15160 PF00440 Bacterial regulatory proteins, tetR family CS557_15165 PF00440 Bacterial regulatory proteins, tetR family CS557_15165 PF08360 QacR-like protein, C-terminal region CS557_15170 PF01323 DSBA-like thioredoxin domain CS557_15180 PF13419 Haloacid dehalogenase-like hydrolase CS557_15185 PF00106 short chain dehydrogenase CS557_15195 PF00583 Acetyltransferase (GNAT) family CS557_15195 PF00696 Amino acid kinase family CS557_15200 PF09084 NMT1/THI5 like CS557_15205 PF09084 NMT1/THI5 like CS557_15210 PF00296 Luciferase-like monooxygenase CS557_15215 PF00528 Binding-protein-dependent transport system inner membrane component CS557_15220 PF00005 ABC transporter CS557_15225 PF00440 Bacterial regulatory proteins, tetR family CS557_15225 PF08362 YcdC-like protein, C-terminal region CS557_15240 PF01687 Riboflavin kinase CS557_15240 PF06574 FAD synthetase CS557_15245 PF06827 Zinc finger found in FPG and IleRS CS557_15245 PF08264 Anticodon-binding domain of tRNA CS557_15245 PF00133 tRNA synthetases class I (I, L, M and V) CS557_15250 PF01252 Signal peptidase (SPase) II CS557_15255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CS557_15260 PF03358 NADPH-dependent FMN reductase CS557_15295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CS557_15300 PF07859 alpha/beta hydrolase fold CS557_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_15315 PF03466 LysR substrate binding domain CS557_15320 PF01025 GrpE CS557_15325 PF00012 Hsp70 protein CS557_15330 PF12706 Beta-lactamase superfamily domain CS557_15355 PF13406 Transglycosylase SLT domain CS557_15360 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CS557_15360 PF02222 ATP-grasp domain CS557_15365 PF00731 AIR carboxylase CS557_15380 PF01225 Mur ligase family, catalytic domain CS557_15380 PF02875 Mur ligase family, glutamate ligase domain CS557_15380 PF08245 Mur ligase middle domain CS557_15385 PF00106 short chain dehydrogenase CS557_15400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CS557_15400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CS557_15400 PF02770 Acyl-CoA dehydrogenase, middle domain CS557_15405 PF03466 LysR substrate binding domain CS557_15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CS557_15415 PF03741 Integral membrane protein TerC family CS557_15425 PF03738 Glutathionylspermidine synthase preATP-grasp CS557_15435 PF01979 Amidohydrolase family CS557_15440 PF00156 Phosphoribosyl transferase domain CS557_15450 PF10411 Disulfide bond isomerase protein N-terminus CS557_15450 PF13098 Thioredoxin-like domain CS557_15455 PF00437 Type II/IV secretion system protein CS557_15465 PF01926 50S ribosome-binding GTPase CS557_15465 PF12631 MnmE helical domain CS557_15465 PF10396 GTP-binding protein TrmE N-terminus CS557_15470 PF02096 60Kd inner membrane protein CS557_15470 PF14849 YidC periplasmic domain CS557_15475 PF01809 Putative membrane protein insertion efficiency factor CS557_15480 PF00825 Ribonuclease P CS557_15485 PF00468 Ribosomal protein L34