CS557_00005 SM00382 ATPases associated with a variety of cellular activities CS557_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CS557_00010 SM00480 DNA polymerase III beta subunit CS557_00020 SM00387 Histidine kinase-like ATPases CS557_00020 SM00433 TopoisomeraseII CS557_00035 SM00382 ATPases associated with a variety of cellular activities CS557_00105 SM00671 Sel1-like repeats. CS557_00110 SM00248 ankyrin repeats CS557_00165 SM00822 CS557_00165 CS557_00200 SM00271 DnaJ molecular chaperone homology domain CS557_00235 SM00345 helix_turn_helix gluconate operon transcriptional repressor CS557_00240 SM00829 Enoylreductase CS557_00260 SM00478 endonuclease III CS557_00260 SM00525 CS557_00260 CS557_00290 SM00382 ATPases associated with a variety of cellular activities CS557_00315 SM01130 CS557_00315 CS557_00325 SM00344 helix_turn_helix ASNC type CS557_00405 SM00450 Rhodanese Homology Domain CS557_00440 SM00387 Histidine kinase-like ATPases CS557_00440 SM00388 His Kinase A (phosphoacceptor) domain CS557_00445 SM00448 cheY-homologous receiver domain CS557_00445 SM00862 Transcriptional regulatory protein, C terminal CS557_00545 SM00387 Histidine kinase-like ATPases CS557_00545 SM00433 TopoisomeraseII CS557_00575 SM00382 ATPases associated with a variety of cellular activities CS557_00620 SM00267 diguanylate cyclase CS557_00660 SM00357 Cold shock protein domain CS557_00670 SM00347 helix_turn_helix multiple antibiotic resistance protein CS557_00705 SM00842 Cell division protein FtsA CS557_00710 SM00864 Tubulin/FtsZ family, GTPase domain CS557_00710 SM00865 Tubulin/FtsZ family, C-terminal domain CS557_00760 SM00849 Metallo-beta-lactamase superfamily CS557_00770 SM00116 Domain in cystathionine beta-synthase and other proteins. CS557_00770 SM01240 CS557_00770 CS557_00805 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CS557_00845 SM00344 helix_turn_helix ASNC type CS557_00860 SM00421 helix_turn_helix, Lux Regulon CS557_00860 SM00448 cheY-homologous receiver domain CS557_00870 SM00267 diguanylate cyclase CS557_00885 SM00829 Enoylreductase CS557_00925 SM00345 helix_turn_helix gluconate operon transcriptional repressor CS557_01045 SM00530 Helix-turn-helix XRE-family like proteins CS557_01095 SM00220 Serine/Threonine protein kinases, catalytic domain CS557_01130 SM00255 Toll - interleukin 1 - resistance CS557_01225 SM00477 DNA/RNA non-specific endonuclease CS557_01225 SM00892 DNA/RNA non-specific endonuclease CS557_01240 SM00342 helix_turn_helix, arabinose operon control protein CS557_01285 SM00530 Helix-turn-helix XRE-family like proteins CS557_01300 SM00474 3'-5' exonuclease CS557_01345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CS557_01345 SM00387 Histidine kinase-like ATPases CS557_01345 SM00388 His Kinase A (phosphoacceptor) domain CS557_01350 SM00448 cheY-homologous receiver domain CS557_01350 SM00862 Transcriptional regulatory protein, C terminal CS557_01355 SM00316 Ribosomal protein S1-like RNA-binding domain CS557_01355 SM00732 Likely ribonuclease with RNase H fold. CS557_01360 SM00342 helix_turn_helix, arabinose operon control protein CS557_01385 SM00422 helix_turn_helix, mercury resistance CS557_01395 SM00822 CS557_01395 CS557_01405 SM00382 ATPases associated with a variety of cellular activities CS557_01550 SM00842 Cell division protein FtsA CS557_01570 SM00965 Secretin and TonB N terminus short domain CS557_01660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CS557_01660 SM00954 Region found in RelA / SpoT proteins CS557_01665 SM01409 CS557_01665 CS557_01670 SM00072 Guanylate kinase homologues. CS557_01935 SM00116 Domain in cystathionine beta-synthase and other proteins. CS557_01975 SM00861 Transketolase, pyrimidine binding domain CS557_01985 SM00487 DEAD-like helicases superfamily CS557_01985 SM00490 helicase superfamily c-terminal domain CS557_01995 SM00382 ATPases associated with a variety of cellular activities CS557_02045 SM00487 DEAD-like helicases superfamily CS557_02045 SM00490 helicase superfamily c-terminal domain CS557_02060 SM00563 Phosphate acyltransferases CS557_02110 SM01403 CS557_02110 CS557_02130 SM01382 CS557_02130 CS557_02130 SM01383 CS557_02130 CS557_02145 SM00322 K homology RNA-binding domain CS557_02165 SM01374 CS557_02165 CS557_02170 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CS557_02235 SM00363 S4 RNA-binding domain CS557_02235 SM01390 CS557_02235 CS557_02240 SM00662 RNA polymerases D CS557_02335 SM00316 Ribosomal protein S1-like RNA-binding domain CS557_02335 SM00955 CS557_02335 CS557_02380 SM00342 helix_turn_helix, arabinose operon control protein CS557_02440 SM00671 Sel1-like repeats. CS557_02455 SM00917 LeuA allosteric (dimerisation) domain CS557_02465 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CS557_02485 SM00382 ATPases associated with a variety of cellular activities CS557_02485 SM00994 ClpX C4-type zinc finger CS557_02485 SM01086 C-terminal, D2-small domain, of ClpB protein CS557_02505 SM00342 helix_turn_helix, arabinose operon control protein CS557_02545 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CS557_02545 SM00245 tail specific protease CS557_02575 SM00563 Phosphate acyltransferases CS557_02580 SM00155 Phospholipase D. Active site motifs. CS557_02595 SM00267 diguanylate cyclase CS557_02655 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CS557_02675 SM00450 Rhodanese Homology Domain CS557_02700 SM00481 DNA polymerase alpha chain like domain CS557_02725 SM00342 helix_turn_helix, arabinose operon control protein CS557_02745 SM00450 Rhodanese Homology Domain CS557_02755 SM00479 CS557_02755 CS557_02780 SM00382 ATPases associated with a variety of cellular activities CS557_02830 SM00052 Putative diguanylate phosphodiesterase CS557_02830 SM00267 diguanylate cyclase CS557_02845 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CS557_02850 SM00226 Low molecular weight phosphatase family CS557_02935 SM00422 helix_turn_helix, mercury resistance CS557_02940 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CS557_02940 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CS557_02990 SM00073 Histidine Phosphotransfer domain CS557_02990 SM00387 Histidine kinase-like ATPases CS557_02990 SM00388 His Kinase A (phosphoacceptor) domain CS557_02990 SM00448 cheY-homologous receiver domain CS557_03010 SM00954 Region found in RelA / SpoT proteins CS557_03025 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CS557_03075 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CS557_03135 SM00873 B3/4 domain CS557_03135 SM00874 tRNA synthetase B5 domain CS557_03135 SM00896 Ferredoxin-fold anticodon binding domain CS557_03140 SM00411 bacterial (prokaryotic) histone like domain CS557_03150 SM00357 Cold shock protein domain CS557_03150 SM00382 ATPases associated with a variety of cellular activities CS557_03150 SM00959 Rho termination factor, N-terminal domain CS557_03170 SM00977 TilS substrate C-terminal domain CS557_03185 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CS557_03185 SM00474 3'-5' exonuclease CS557_03185 SM00475 5'-3' exonuclease CS557_03185 SM00482 DNA polymerase A domain CS557_03205 SM00382 ATPases associated with a variety of cellular activities CS557_03230 SM00331 Sigma factor PP2C-like phosphatases CS557_03475 SM01400 CS557_03475 CS557_03550 SM00448 cheY-homologous receiver domain CS557_03550 SM00862 Transcriptional regulatory protein, C terminal CS557_03555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CS557_03555 SM00387 Histidine kinase-like ATPases CS557_03555 SM00388 His Kinase A (phosphoacceptor) domain CS557_03565 SM00267 diguanylate cyclase CS557_03590 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CS557_03595 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CS557_03595 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CS557_03640 SM00357 Cold shock protein domain CS557_03645 SM00357 Cold shock protein domain CS557_03645 SM00894 Excalibur calcium-binding domain CS557_03720 SM00849 Metallo-beta-lactamase superfamily CS557_03815 SM00382 ATPases associated with a variety of cellular activities CS557_03815 SM00962 SRP54-type protein, GTPase domain CS557_03815 SM00963 SRP54-type protein, helical bundle domain CS557_03840 SM00345 helix_turn_helix gluconate operon transcriptional repressor CS557_03850 SM00771 ZipA, C-terminal domain (FtsZ-binding) CS557_03855 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CS557_03855 SM00292 breast cancer carboxy-terminal domain CS557_03855 SM00532 Ligase N family CS557_03955 SM00382 ATPases associated with a variety of cellular activities CS557_03960 SM00363 S4 RNA-binding domain CS557_04005 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CS557_04010 SM00822 CS557_04010 CS557_04020 SM00257 Lysin motif CS557_04050 SM00100 Cyclic nucleotide-monophosphate binding domain CS557_04070 SM01400 CS557_04070 CS557_04105 SM00028 Tetratricopeptide repeats CS557_04115 SM00400 zinc finger CS557_04115 SM00493 CS557_04115 CS557_04125 SM00363 S4 RNA-binding domain CS557_04195 SM00825 Beta-ketoacyl synthase CS557_04215 SM00838 Elongation factor G C-terminus CS557_04215 SM00889 Elongation factor G, domain IV CS557_04260 SM00843 CS557_04260 CS557_04295 SM00563 Phosphate acyltransferases CS557_04360 SM00382 ATPases associated with a variety of cellular activities CS557_04365 SM00382 ATPases associated with a variety of cellular activities CS557_04420 SM01004 Delta-aminolevulinic acid dehydratase CS557_04445 SM00422 helix_turn_helix, mercury resistance CS557_04460 SM00382 ATPases associated with a variety of cellular activities CS557_04460 SM00404 Protein tyrosine phosphatase, catalytic domain motif CS557_04480 SM00344 helix_turn_helix ASNC type CS557_04485 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CS557_04560 SM00382 ATPases associated with a variety of cellular activities CS557_04560 SM01086 C-terminal, D2-small domain, of ClpB protein CS557_04635 SM00382 ATPases associated with a variety of cellular activities CS557_04655 SM00062 Bacterial periplasmic substrate-binding proteins CS557_04660 SM00382 ATPases associated with a variety of cellular activities CS557_04715 SM01018 B12 binding domain CS557_04725 SM00978 CS557_04725 CS557_04730 SM00382 ATPases associated with a variety of cellular activities CS557_04775 SM00893 Electron transfer flavoprotein domain CS557_04780 SM00893 Electron transfer flavoprotein domain CS557_04790 SM00434 DNA Topoisomerase IV CS557_04845 SM00382 ATPases associated with a variety of cellular activities CS557_04850 SM00849 Metallo-beta-lactamase superfamily CS557_04970 SM00382 ATPases associated with a variety of cellular activities CS557_04975 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CS557_04985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CS557_04995 SM01211 CS557_04995 CS557_05005 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CS557_05100 SM00382 ATPases associated with a variety of cellular activities CS557_05145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CS557_05155 SM00838 Elongation factor G C-terminus CS557_05170 SM00358 Double-stranded RNA binding motif CS557_05170 SM00535 Ribonuclease III family CS557_05235 SM00487 DEAD-like helicases superfamily CS557_05235 SM00490 helicase superfamily c-terminal domain CS557_05250 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CS557_05270 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CS557_05345 SM01091 Transporter associated domain CS557_05370 SM00840 CS557_05370 CS557_05375 SM00116 Domain in cystathionine beta-synthase and other proteins. CS557_05395 SM00382 ATPases associated with a variety of cellular activities CS557_05410 SM00382 ATPases associated with a variety of cellular activities CS557_05450 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CS557_05450 SM00534 ATPase domain of DNA mismatch repair MUTS family CS557_05490 SM00487 DEAD-like helicases superfamily CS557_05495 SM00382 ATPases associated with a variety of cellular activities CS557_05505 SM00952 CS557_05505 CS557_05510 SM00829 Enoylreductase CS557_05545 SM00342 helix_turn_helix, arabinose operon control protein CS557_05575 SM00878 Biotin carboxylase C-terminal domain CS557_05600 SM00382 ATPases associated with a variety of cellular activities CS557_05610 SM01091 Transporter associated domain CS557_05635 SM00387 Histidine kinase-like ATPases CS557_05635 SM00388 His Kinase A (phosphoacceptor) domain CS557_05640 SM00448 cheY-homologous receiver domain CS557_05640 SM00862 Transcriptional regulatory protein, C terminal CS557_05650 SM00095 Transthyretin CS557_05680 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CS557_05700 SM00563 Phosphate acyltransferases CS557_05760 SM00220 Serine/Threonine protein kinases, catalytic domain CS557_05785 SM00346 helix_turn_helix isocitrate lyase regulation CS557_05805 SM00822 CS557_05805 CS557_05915 SM00936 Penicillin-binding protein 5, C-terminal domain CS557_05935 SM00257 Lysin motif CS557_05980 SM00052 Putative diguanylate phosphodiesterase CS557_05995 SM00841 Elongation factor P, C-terminal CS557_05995 SM01185 CS557_05995 CS557_06020 SM00460 Transglutaminase/protease-like homologues CS557_06085 SM00342 helix_turn_helix, arabinose operon control protein CS557_06110 SM00882 Coenzyme A transferase CS557_06115 SM00882 Coenzyme A transferase CS557_06130 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CS557_06205 SM00833 Cobalamin synthesis protein cobW C-terminal domain CS557_06215 SM00382 ATPases associated with a variety of cellular activities CS557_06220 SM00849 Metallo-beta-lactamase superfamily CS557_06265 SM00387 Histidine kinase-like ATPases CS557_06265 SM00388 His Kinase A (phosphoacceptor) domain CS557_06270 SM00448 cheY-homologous receiver domain CS557_06270 SM00862 Transcriptional regulatory protein, C terminal CS557_06330 SM00346 helix_turn_helix isocitrate lyase regulation CS557_06335 SM00882 Coenzyme A transferase CS557_06340 SM00882 Coenzyme A transferase CS557_06350 SM00998 Adenylosuccinate lyase C-terminus CS557_06385 SM00710 Parallel beta-helix repeats CS557_06395 SM00564 beta-propeller repeat CS557_06425 SM00345 helix_turn_helix gluconate operon transcriptional repressor CS557_06425 SM00895 CS557_06425 CS557_06460 SM00345 helix_turn_helix gluconate operon transcriptional repressor CS557_06460 SM00866 CS557_06460 CS557_06495 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CS557_06510 SM00342 helix_turn_helix, arabinose operon control protein CS557_06515 SM00345 helix_turn_helix gluconate operon transcriptional repressor CS557_06525 SM00342 helix_turn_helix, arabinose operon control protein CS557_06585 SM00796 Allophanate hydrolase subunit 1 CS557_06585 SM00797 Allophanate hydrolase subunit 2 CS557_06590 SM00878 Biotin carboxylase C-terminal domain CS557_06600 SM00100 Cyclic nucleotide-monophosphate binding domain CS557_06600 SM00419 helix_turn_helix, cAMP Regulatory protein CS557_06615 SM00382 ATPases associated with a variety of cellular activities CS557_06615 SM01086 C-terminal, D2-small domain, of ClpB protein CS557_06625 SM00981 CS557_06625 CS557_06690 SM00342 helix_turn_helix, arabinose operon control protein CS557_06715 SM00382 ATPases associated with a variety of cellular activities CS557_06715 SM00487 DEAD-like helicases superfamily CS557_06715 SM00490 helicase superfamily c-terminal domain CS557_06715 SM00847 Helicase associated domain (HA2) Add an annotation CS557_06730 SM00729 Elongator protein 3, MiaB family, Radical SAM CS557_06785 SM00382 ATPases associated with a variety of cellular activities CS557_06845 SM00479 CS557_06845 CS557_06885 SM00937 CS557_06885 CS557_06900 SM00342 helix_turn_helix, arabinose operon control protein CS557_06905 SM00822 CS557_06905 CS557_06915 SM00903 Flavin reductase like domain CS557_06920 SM00342 helix_turn_helix, arabinose operon control protein CS557_06950 SM00905 Dihydroneopterin aldolase CS557_07045 SM01236 CS557_07045 CS557_07075 SM00382 ATPases associated with a variety of cellular activities CS557_07085 SM00448 cheY-homologous receiver domain CS557_07085 SM00862 Transcriptional regulatory protein, C terminal CS557_07090 SM00387 Histidine kinase-like ATPases CS557_07090 SM00388 His Kinase A (phosphoacceptor) domain CS557_07105 SM00028 Tetratricopeptide repeats CS557_07185 SM00830 Chorismate mutase type II CS557_07240 SM00382 ATPases associated with a variety of cellular activities CS557_07300 SM00357 Cold shock protein domain CS557_07305 SM00487 DEAD-like helicases superfamily CS557_07305 SM00490 helicase superfamily c-terminal domain CS557_07345 SM00470 ParB-like nuclease domain CS557_07360 SM00382 ATPases associated with a variety of cellular activities CS557_07420 SM00986 Uracil DNA glycosylase superfamily CS557_07420 SM00987 UreE urease accessory protein, C-terminal domain CS557_07445 SM00316 Ribosomal protein S1-like RNA-binding domain CS557_07450 SM00411 bacterial (prokaryotic) histone like domain CS557_07465 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CS557_07480 SM00342 helix_turn_helix, arabinose operon control protein CS557_07500 SM00347 helix_turn_helix multiple antibiotic resistance protein CS557_07555 SM00116 Domain in cystathionine beta-synthase and other proteins. CS557_07580 SM00382 ATPases associated with a variety of cellular activities CS557_07580 SM00962 SRP54-type protein, GTPase domain CS557_07580 SM00963 SRP54-type protein, helical bundle domain CS557_07640 SM01264 CS557_07640 CS557_07685 SM00859 Semialdehyde dehydrogenase, NAD binding domain CS557_07700 SM00382 ATPases associated with a variety of cellular activities CS557_07700 SM01086 C-terminal, D2-small domain, of ClpB protein CS557_07710 SM00382 ATPases associated with a variety of cellular activities CS557_07770 SM01192 CS557_07770 CS557_07770 SM01193 CS557_07770 CS557_07800 SM00849 Metallo-beta-lactamase superfamily CS557_07815 SM00155 Phospholipase D. Active site motifs. CS557_07820 SM00829 Enoylreductase CS557_07830 SM00796 Allophanate hydrolase subunit 1 CS557_07830 SM00797 Allophanate hydrolase subunit 2 CS557_07830 SM00878 Biotin carboxylase C-terminal domain CS557_07835 SM00345 helix_turn_helix gluconate operon transcriptional repressor CS557_07835 SM00895 CS557_07835 CS557_07845 SM00342 helix_turn_helix, arabinose operon control protein CS557_07850 SM00829 Enoylreductase CS557_07905 SM00882 Coenzyme A transferase CS557_07910 SM00882 Coenzyme A transferase CS557_07990 SM00796 Allophanate hydrolase subunit 1 CS557_07990 SM00797 Allophanate hydrolase subunit 2 CS557_07990 SM00878 Biotin carboxylase C-terminal domain CS557_08005 SM00382 ATPases associated with a variety of cellular activities CS557_08025 SM00342 helix_turn_helix, arabinose operon control protein CS557_08045 SM00878 Biotin carboxylase C-terminal domain CS557_08095 SM00882 Coenzyme A transferase CS557_08100 SM00882 Coenzyme A transferase CS557_08130 SM00903 Flavin reductase like domain CS557_08150 SM00530 Helix-turn-helix XRE-family like proteins CS557_08220 SM00729 Elongator protein 3, MiaB family, Radical SAM CS557_08225 SM00382 ATPases associated with a variety of cellular activities CS557_08240 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CS557_08285 SM00382 ATPases associated with a variety of cellular activities CS557_08310 SM00342 helix_turn_helix, arabinose operon control protein CS557_08325 SM00267 diguanylate cyclase CS557_08350 SM00382 ATPases associated with a variety of cellular activities CS557_08365 SM00341 Helicase and RNase D C-terminal CS557_08365 SM00474 3'-5' exonuclease CS557_08370 SM00493 CS557_08370 CS557_08395 SM01324 CS557_08395 CS557_08475 SM00855 Phosphoglycerate mutase family CS557_08520 SM01006 Siderophore biosynthesis protein domain CS557_08575 SM00342 helix_turn_helix, arabinose operon control protein CS557_08595 SM00935 Outer membrane protein (OmpH-like) CS557_08605 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CS557_08635 SM00729 Elongator protein 3, MiaB family, Radical SAM CS557_08640 SM00091 PAS domain CS557_08640 SM00387 Histidine kinase-like ATPases CS557_08640 SM00388 His Kinase A (phosphoacceptor) domain CS557_08645 SM00382 ATPases associated with a variety of cellular activities CS557_08645 SM00448 cheY-homologous receiver domain CS557_08720 SM00345 helix_turn_helix gluconate operon transcriptional repressor CS557_08730 SM00852 Probable molybdopterin binding domain CS557_08735 SM00852 Probable molybdopterin binding domain CS557_08750 SM00729 Elongator protein 3, MiaB family, Radical SAM CS557_08755 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CS557_08770 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CS557_08790 SM00448 cheY-homologous receiver domain CS557_08790 SM01012 CS557_08790 CS557_08810 SM00878 Biotin carboxylase C-terminal domain CS557_08850 SM00346 helix_turn_helix isocitrate lyase regulation CS557_08895 SM00226 Low molecular weight phosphatase family CS557_08910 SM00382 ATPases associated with a variety of cellular activities CS557_08915 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CS557_08940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CS557_08980 SM00382 ATPases associated with a variety of cellular activities CS557_08990 SM00342 helix_turn_helix, arabinose operon control protein CS557_09005 SM00344 helix_turn_helix ASNC type CS557_09055 SM00867 YceI-like domain CS557_09065 SM00861 Transketolase, pyrimidine binding domain CS557_09105 SM00357 Cold shock protein domain CS557_09135 SM00729 Elongator protein 3, MiaB family, Radical SAM CS557_09135 SM00876 Biotin and Thiamin Synthesis associated domain CS557_09205 SM00357 Cold shock protein domain CS557_09220 SM00563 Phosphate acyltransferases CS557_09230 SM00344 helix_turn_helix ASNC type CS557_09285 SM00100 Cyclic nucleotide-monophosphate binding domain CS557_09285 SM00419 helix_turn_helix, cAMP Regulatory protein CS557_09300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CS557_09315 SM00344 helix_turn_helix ASNC type CS557_09345 SM00671 Sel1-like repeats. CS557_09350 SM00870 CS557_09350 CS557_09355 SM00481 DNA polymerase alpha chain like domain CS557_09450 SM00855 Phosphoglycerate mutase family CS557_09525 SM00822 CS557_09525 CS557_09560 SM00458 Ricin-type beta-trefoil CS557_09580 SM00363 S4 RNA-binding domain CS557_09585 SM00382 ATPases associated with a variety of cellular activities CS557_09610 SM00411 bacterial (prokaryotic) histone like domain CS557_09645 SM00271 DnaJ molecular chaperone homology domain CS557_09660 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CS557_09670 SM00487 DEAD-like helicases superfamily CS557_09670 SM00490 helicase superfamily c-terminal domain CS557_09670 SM00982 CS557_09670 CS557_09670 SM01058 CarD-like/TRCF domain CS557_09755 SM00382 ATPases associated with a variety of cellular activities CS557_09825 SM00853 MutL C terminal dimerisation domain CS557_09825 SM01340 CS557_09825 CS557_09855 SM00363 S4 RNA-binding domain CS557_09945 SM01005 Alanine racemase, C-terminal domain CS557_09955 SM00460 Transglutaminase/protease-like homologues CS557_09975 SM00788 Adenylosuccinate synthetase CS557_09990 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CS557_09995 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CS557_10055 SM00342 helix_turn_helix, arabinose operon control protein CS557_10070 SM01228 CS557_10070 CS557_10095 SM00798 AICARFT/IMPCHase bienzyme CS557_10095 SM00851 MGS-like domain CS557_10100 SM01209 CS557_10100 CS557_10100 SM01210 CS557_10100 CS557_10110 SM00382 ATPases associated with a variety of cellular activities CS557_10110 SM00930 CS557_10110 CS557_10130 SM00849 Metallo-beta-lactamase superfamily CS557_10140 SM00996 S-adenosyl-L-homocysteine hydrolase CS557_10140 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CS557_10155 SM00052 Putative diguanylate phosphodiesterase CS557_10155 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CS557_10155 SM00091 PAS domain CS557_10155 SM00267 diguanylate cyclase CS557_10160 SM00919 Malic enzyme, NAD binding domain CS557_10160 SM01274 CS557_10160 CS557_10200 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CS557_10255 SM01230 CS557_10255 CS557_10290 SM00463 Small MutS-related domain CS557_10330 SM00267 diguanylate cyclase CS557_10340 SM00479 CS557_10340 CS557_10360 SM00382 ATPases associated with a variety of cellular activities CS557_10380 SM00257 Lysin motif CS557_10385 SM00479 CS557_10385 CS557_10430 SM00422 helix_turn_helix, mercury resistance CS557_10450 SM01011 Aminopeptidase P, N-terminal domain CS557_10485 SM00327 von Willebrand factor (vWF) type A domain CS557_10495 SM00382 ATPases associated with a variety of cellular activities CS557_10500 SM00567 E-Z type HEAT repeats CS557_10520 SM00382 ATPases associated with a variety of cellular activities CS557_10520 SM00464 Found in ATP-dependent protease La (LON) CS557_10540 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CS557_10550 SM00478 endonuclease III CS557_10550 SM00525 CS557_10550 CS557_10610 SM00382 ATPases associated with a variety of cellular activities CS557_10685 SM00487 DEAD-like helicases superfamily CS557_10685 SM00490 helicase superfamily c-terminal domain CS557_10710 SM00880 CS557_10710 CS557_10710 SM01118 CS557_10710 CS557_10740 SM01329 CS557_10740 CS557_10865 SM00382 ATPases associated with a variety of cellular activities CS557_10875 SM00947 Carbonic anhydrase CS557_10910 SM00421 helix_turn_helix, Lux Regulon CS557_10940 SM00883 Chaperonin 10 Kd subunit CS557_10955 SM00046 Diacylglycerol kinase catalytic domain (presumed) CS557_10970 SM00420 helix_turn_helix, Deoxyribose operon repressor CS557_10970 SM01134 CS557_10970 CS557_11045 SM01322 CS557_11045 CS557_11125 SM00116 Domain in cystathionine beta-synthase and other proteins. CS557_11125 SM00924 MgtE intracellular N domain CS557_11165 SM00327 von Willebrand factor (vWF) type A domain CS557_11175 SM00382 ATPases associated with a variety of cellular activities CS557_11185 SM01103 CS557_11185 CS557_11200 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CS557_11205 SM00851 MGS-like domain CS557_11205 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CS557_11240 SM00854 Bacterial capsule synthesis protein PGA_cap CS557_11285 SM00244 prohibitin homologues CS557_11310 SM00881 CoA binding domain CS557_11330 SM00861 Transketolase, pyrimidine binding domain CS557_11365 SM01324 CS557_11365 CS557_11380 SM00450 Rhodanese Homology Domain CS557_11515 SM00014 Acid phosphatase homologues CS557_11550 SM00822 CS557_11550 CS557_11595 SM00387 Histidine kinase-like ATPases CS557_11595 SM00388 His Kinase A (phosphoacceptor) domain CS557_11600 SM00448 cheY-homologous receiver domain CS557_11600 SM00862 Transcriptional regulatory protein, C terminal CS557_11620 SM00563 Phosphate acyltransferases CS557_11635 SM00244 prohibitin homologues CS557_11670 SM01230 CS557_11670 CS557_11675 SM00014 Acid phosphatase homologues CS557_11695 SM00448 cheY-homologous receiver domain CS557_11695 SM00862 Transcriptional regulatory protein, C terminal CS557_11700 SM00387 Histidine kinase-like ATPases CS557_11700 SM00388 His Kinase A (phosphoacceptor) domain CS557_11750 SM00316 Ribosomal protein S1-like RNA-binding domain CS557_11785 SM00845 GatB domain CS557_11960 SM00073 Histidine Phosphotransfer domain CS557_11960 SM00260 Two component signalling adaptor domain CS557_11960 SM00387 Histidine kinase-like ATPases CS557_11960 SM00448 cheY-homologous receiver domain CS557_11960 SM01231 CS557_11960 CS557_11965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CS557_11970 SM00260 Two component signalling adaptor domain CS557_11975 SM00448 cheY-homologous receiver domain CS557_11980 SM00448 cheY-homologous receiver domain CS557_12025 SM00671 Sel1-like repeats. CS557_12035 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CS557_12035 SM01232 CS557_12035 CS557_12055 SM00838 Elongation factor G C-terminus CS557_12115 SM00564 beta-propeller repeat CS557_12130 SM00342 helix_turn_helix, arabinose operon control protein CS557_12200 SM00957 SecA DEAD-like domain CS557_12200 SM00958 SecA preprotein cross-linking domain CS557_12210 SM00849 Metallo-beta-lactamase superfamily CS557_12215 SM00195 Dual specificity phosphatase, catalytic domain CS557_12250 SM00342 helix_turn_helix, arabinose operon control protein CS557_12325 SM00448 cheY-homologous receiver domain CS557_12325 SM00862 Transcriptional regulatory protein, C terminal CS557_12330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CS557_12330 SM00387 Histidine kinase-like ATPases CS557_12330 SM00388 His Kinase A (phosphoacceptor) domain CS557_12465 SM00984 UDP binding domain CS557_12480 SM00387 Histidine kinase-like ATPases CS557_12480 SM00388 His Kinase A (phosphoacceptor) domain CS557_12695 SM00530 Helix-turn-helix XRE-family like proteins CS557_12760 SM01323 CS557_12760 CS557_12785 SM00564 beta-propeller repeat CS557_12810 SM00028 Tetratricopeptide repeats CS557_12820 SM00562 CS557_12820 CS557_12830 SM00014 Acid phosphatase homologues CS557_12845 SM00650 Ribosomal RNA adenine dimethylases CS557_12905 SM00960 Roadblock/LC7 domain CS557_12925 SM00878 Biotin carboxylase C-terminal domain CS557_13030 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CS557_13060 SM00729 Elongator protein 3, MiaB family, Radical SAM CS557_13190 SM00360 RNA recognition motif CS557_13210 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CS557_13210 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CS557_13210 SM00493 CS557_13210 CS557_13225 SM00829 Enoylreductase CS557_13235 SM00382 ATPases associated with a variety of cellular activities CS557_13255 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CS557_13275 SM00859 Semialdehyde dehydrogenase, NAD binding domain CS557_13290 SM00870 CS557_13290 CS557_13300 SM00342 helix_turn_helix, arabinose operon control protein CS557_13305 SM00316 Ribosomal protein S1-like RNA-binding domain CS557_13320 SM01329 CS557_13320 CS557_13375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CS557_13425 SM00363 S4 RNA-binding domain CS557_13435 SM00316 Ribosomal protein S1-like RNA-binding domain CS557_13460 SM00729 Elongator protein 3, MiaB family, Radical SAM CS557_13505 SM00903 Flavin reductase like domain CS557_13535 SM00849 Metallo-beta-lactamase superfamily CS557_13605 SM00116 Domain in cystathionine beta-synthase and other proteins. CS557_13605 SM01091 Transporter associated domain CS557_13630 SM00487 DEAD-like helicases superfamily CS557_13630 SM00490 helicase superfamily c-terminal domain CS557_13645 SM00271 DnaJ molecular chaperone homology domain CS557_13660 SM00316 Ribosomal protein S1-like RNA-binding domain CS557_13660 SM00322 K homology RNA-binding domain CS557_13665 SM01387 CS557_13665 CS557_13795 SM00316 Ribosomal protein S1-like RNA-binding domain CS557_13855 SM00967 RNA 2'-O ribose methyltransferase substrate binding CS557_13875 SM00732 Likely ribonuclease with RNase H fold. CS557_13895 SM00346 helix_turn_helix isocitrate lyase regulation CS557_13910 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CS557_13910 SM00465 GIY-YIG type nucleases (URI domain) CS557_13930 SM00267 diguanylate cyclase CS557_13965 SM00382 ATPases associated with a variety of cellular activities CS557_13995 SM00387 Histidine kinase-like ATPases CS557_14030 SM00663 RNA polymerase I subunit A N-terminus CS557_14055 SM00649 Ribosomal protein L11/L12 CS557_14060 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CS557_14060 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CS557_14110 SM00240 Forkhead associated domain CS557_14120 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CS557_14130 SM00528 Domain in histone-like proteins of HNS family CS557_14160 SM00448 cheY-homologous receiver domain CS557_14160 SM00850 LytTr DNA-binding domain CS557_14235 SM00899 CS557_14235 CS557_14275 SM00421 helix_turn_helix, Lux Regulon CS557_14275 SM00448 cheY-homologous receiver domain CS557_14280 SM00387 Histidine kinase-like ATPases CS557_14280 SM00388 His Kinase A (phosphoacceptor) domain CS557_14285 SM00382 ATPases associated with a variety of cellular activities CS557_14285 SM00448 cheY-homologous receiver domain CS557_14290 SM00245 tail specific protease CS557_14355 SM00938 Nitrogen regulatory protein P-II CS557_14365 SM00382 ATPases associated with a variety of cellular activities CS557_14405 SM00434 DNA Topoisomerase IV CS557_14425 SM01091 Transporter associated domain CS557_14455 SM00641 Glycosyl hydrolases family 25 CS557_14465 SM00448 cheY-homologous receiver domain CS557_14465 SM00862 Transcriptional regulatory protein, C terminal CS557_14470 SM00387 Histidine kinase-like ATPases CS557_14470 SM00388 His Kinase A (phosphoacceptor) domain CS557_14495 SM00729 Elongator protein 3, MiaB family, Radical SAM CS557_14510 SM00422 helix_turn_helix, mercury resistance CS557_14605 SM00387 Histidine kinase-like ATPases CS557_14605 SM00388 His Kinase A (phosphoacceptor) domain CS557_14605 SM00448 cheY-homologous receiver domain CS557_14660 SM00342 helix_turn_helix, arabinose operon control protein CS557_14680 SM00382 ATPases associated with a variety of cellular activities CS557_14730 SM00382 ATPases associated with a variety of cellular activities CS557_14750 SM00919 Malic enzyme, NAD binding domain CS557_14750 SM01274 CS557_14750 CS557_14755 SM00836 DALR anticodon binding domain CS557_14755 SM01016 Arginyl tRNA synthetase N terminal dom CS557_14895 SM01005 Alanine racemase, C-terminal domain CS557_14905 SM00344 helix_turn_helix ASNC type CS557_14945 SM00342 helix_turn_helix, arabinose operon control protein CS557_14985 SM00345 helix_turn_helix gluconate operon transcriptional repressor CS557_14985 SM00895 CS557_14985 CS557_15005 SM00984 UDP binding domain CS557_15090 SM00984 UDP binding domain CS557_15100 SM00226 Low molecular weight phosphatase family CS557_15125 SM00644 CS557_15125 CS557_15200 SM00062 Bacterial periplasmic substrate-binding proteins CS557_15205 SM00062 Bacterial periplasmic substrate-binding proteins CS557_15220 SM00382 ATPases associated with a variety of cellular activities CS557_15240 SM00904 Riboflavin kinase CS557_15310 SM00849 Metallo-beta-lactamase superfamily CS557_15330 SM00849 Metallo-beta-lactamase superfamily CS557_15335 SM00235 Zinc-dependent metalloprotease CS557_15340 SM00235 Zinc-dependent metalloprotease CS557_15365 SM01001 AIR carboxylase CS557_15390 SM00855 Phosphoglycerate mutase family CS557_15475 SM01234 CS557_15475