locus-tag class description DKC18_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain DKC18_000010 PF02767 DNA polymerase III beta subunit, central domain DKC18_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain DKC18_000035 PF12848 ABC transporter DKC18_000035 PF00005 ABC transporter DKC18_000055 PF01521 Iron-sulphur cluster biosynthesis DKC18_000060 PF00561 alpha/beta hydrolase fold DKC18_000115 PF00209 Sodium:neurotransmitter symporter family DKC18_000125 PF01189 16S rRNA methyltransferase RsmB/F DKC18_000125 PF01029 NusB family DKC18_000130 PF00551 Formyl transferase DKC18_000130 PF02911 Formyl transferase, C-terminal domain DKC18_000155 PF00860 Permease family DKC18_000195 PF05173 Dihydrodipicolinate reductase, C-terminus DKC18_000195 PF01113 Dihydrodipicolinate reductase, N-terminus DKC18_000205 PF07690 Major Facilitator Superfamily DKC18_000210 PF00248 Aldo/keto reductase family DKC18_000215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_000215 PF03466 LysR substrate binding domain DKC18_000230 PF00155 Aminotransferase class I and II DKC18_000230 PF00392 Bacterial regulatory proteins, gntR family DKC18_000255 PF14815 NUDIX domain DKC18_000255 PF00730 HhH-GPD superfamily base excision DNA repair protein DKC18_000255 PF00633 Helix-hairpin-helix motif DKC18_000255 PF10576 Iron-sulfur binding domain of endonuclease III DKC18_000275 PF07043 Protein of unknown function (DUF1328) DKC18_000280 PF03692 Putative zinc- or iron-chelating domain DKC18_000305 PF01259 SAICAR synthetase DKC18_000315 PF00701 Dihydrodipicolinate synthetase family DKC18_000320 PF00857 Isochorismatase family DKC18_000325 PF01758 Sodium Bile acid symporter family DKC18_000335 PF04463 Protein of unknown function (DUF523) DKC18_000340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKC18_000355 PF02798 Glutathione S-transferase, N-terminal domain DKC18_000355 PF14497 Glutathione S-transferase, C-terminal domain DKC18_000365 PF00324 Amino acid permease DKC18_000375 PF07683 Cobalamin synthesis protein cobW C-terminal domain DKC18_000375 PF02492 CobW/HypB/UreG, nucleotide-binding domain DKC18_000385 PF00392 Bacterial regulatory proteins, gntR family DKC18_000385 PF07702 UTRA domain DKC18_000390 PF05962 HutD DKC18_000395 PF13340 Putative transposase of IS4/5 family (DUF4096) DKC18_000405 PF00221 Aromatic amino acid lyase DKC18_000410 PF00324 Amino acid permease DKC18_000415 PF01979 Amidohydrolase family DKC18_000430 PF13419 Haloacid dehalogenase-like hydrolase DKC18_000475 PF01381 Helix-turn-helix DKC18_000520 PF08721 TnsA endonuclease C terminal DKC18_000520 PF08722 TnsA endonuclease N terminal DKC18_000525 PF01380 SIS domain DKC18_000530 PF14602 Hexapeptide repeat of succinyl-transferase DKC18_000530 PF12804 MobA-like NTP transferase domain DKC18_000530 PF00132 Bacterial transferase hexapeptide (six repeats) DKC18_000535 PF04608 Phosphatidylglycerophosphatase A DKC18_000540 PF02769 AIR synthase related protein, C-terminal domain DKC18_000540 PF00586 AIR synthase related protein, N-terminal domain DKC18_000545 PF01029 NusB family DKC18_000550 PF00885 6,7-dimethyl-8-ribityllumazine synthase DKC18_000585 PF02580 D-Tyr-tRNA(Tyr) deacylase DKC18_000590 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DKC18_000590 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DKC18_000595 PF00581 Rhodanese-like domain DKC18_000645 PF04286 Protein of unknown function (DUF445) DKC18_000660 PF04262 Glutamate-cysteine ligase DKC18_000720 PF05728 Uncharacterised protein family (UPF0227) DKC18_000750 PF00860 Permease family DKC18_000755 PF00576 HIUase/Transthyretin family DKC18_000790 PF00990 Diguanylate cyclase, GGDEF domain DKC18_000790 PF07694 5TMR of 5TMR-LYT DKC18_000795 PF07859 alpha/beta hydrolase fold DKC18_000805 PF03960 ArsC family DKC18_000810 PF03372 Endonuclease/Exonuclease/phosphatase family DKC18_000845 PF01225 Mur ligase family, catalytic domain DKC18_000845 PF02875 Mur ligase family, glutamate ligase domain DKC18_000845 PF08245 Mur ligase middle domain DKC18_000850 PF07478 D-ala D-ala ligase C-terminus DKC18_000850 PF01820 D-ala D-ala ligase N-terminus DKC18_000860 PF02491 SHS2 domain inserted in FTSA DKC18_000865 PF12327 FtsZ family, C-terminal domain DKC18_000865 PF00091 Tubulin/FtsZ family, GTPase domain DKC18_000880 PF01551 Peptidase family M23 DKC18_000885 PF17831 Pyruvate dehydrogenase E1 component middle domain DKC18_000885 PF00456 Transketolase, thiamine diphosphate binding domain DKC18_000890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKC18_000890 PF00364 Biotin-requiring enzyme DKC18_000890 PF02817 e3 binding domain DKC18_000900 PF01169 Uncharacterized protein family UPF0016 DKC18_000905 PF00258 Flavodoxin DKC18_000905 PF01613 Flavin reductase like domain DKC18_000910 PF03692 Putative zinc- or iron-chelating domain DKC18_000915 PF00478 IMP dehydrogenase / GMP reductase domain DKC18_000915 PF00571 CBS domain DKC18_000925 PF01243 Pyridoxamine 5'-phosphate oxidase DKC18_000925 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DKC18_000950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKC18_000980 PF16177 Acetyl-coenzyme A synthetase N-terminus DKC18_000980 PF00501 AMP-binding enzyme DKC18_000980 PF13193 AMP-binding enzyme C-terminal domain DKC18_000990 PF01037 Lrp/AsnC ligand binding domain DKC18_001005 PF00196 Bacterial regulatory proteins, luxR family DKC18_001005 PF00072 Response regulator receiver domain DKC18_001020 PF04341 Protein of unknown function, DUF485 DKC18_001025 PF00474 Sodium:solute symporter family DKC18_001055 PF16925 Tetracyclin repressor-like, C-terminal domain DKC18_001055 PF00440 Bacterial regulatory proteins, tetR family DKC18_001080 PF00376 MerR family regulatory protein DKC18_001080 PF09278 MerR, DNA binding DKC18_001095 PF07690 Major Facilitator Superfamily DKC18_001120 PF00436 Single-strand binding protein family DKC18_001130 PF01381 Helix-turn-helix DKC18_001135 PF18766 SWI2/SNF2 ATPase DKC18_001135 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DKC18_001135 PF12008 Type I restriction and modification enzyme - subunit R C terminal DKC18_001175 PF03591 AzlC protein DKC18_001195 PF00202 Aminotransferase class-III DKC18_001200 PF00171 Aldehyde dehydrogenase family DKC18_001210 PF00857 Isochorismatase family DKC18_001265 PF07690 Major Facilitator Superfamily DKC18_001270 PF03466 LysR substrate binding domain DKC18_001270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_001290 PF00248 Aldo/keto reductase family DKC18_001405 PF06250 YhcG PDDEXK nuclease domain DKC18_001405 PF17761 DUF1016 N-terminal domain DKC18_001465 PF00230 Major intrinsic protein DKC18_001470 PF13340 Putative transposase of IS4/5 family (DUF4096) DKC18_001485 PF00977 Histidine biosynthesis protein DKC18_001490 PF01636 Phosphotransferase enzyme family DKC18_001505 PF03992 Antibiotic biosynthesis monooxygenase DKC18_001525 PF00977 Histidine biosynthesis protein DKC18_001540 PF00117 Glutamine amidotransferase class-I DKC18_001545 PF00475 Imidazoleglycerol-phosphate dehydratase DKC18_001565 PF00583 Acetyltransferase (GNAT) family DKC18_001590 PF17674 HHH domain DKC18_001590 PF00575 S1 RNA binding domain DKC18_001590 PF09371 Tex-like protein N-terminal domain DKC18_001590 PF16921 Tex protein YqgF-like domain DKC18_001595 PF01740 STAS domain DKC18_001595 PF00916 Sulfate permease family DKC18_001600 PF00106 short chain dehydrogenase DKC18_001605 PF01053 Cys/Met metabolism PLP-dependent enzyme DKC18_001615 PF12848 ABC transporter DKC18_001615 PF00005 ABC transporter DKC18_001650 PF01545 Cation efflux family DKC18_001710 PF01795 MraW methylase family DKC18_001730 PF01225 Mur ligase family, catalytic domain DKC18_001730 PF08245 Mur ligase middle domain DKC18_001730 PF02875 Mur ligase family, glutamate ligase domain DKC18_001735 PF00953 Glycosyl transferase family 4 DKC18_001780 PF01202 Shikimate kinase DKC18_001785 PF01761 3-dehydroquinate synthase DKC18_001810 PF04011 LemA family DKC18_001815 PF04536 TPM domain DKC18_001830 PF00114 Pilin (bacterial filament) DKC18_001830 PF07963 Prokaryotic N-terminal methylation motif DKC18_001845 PF00210 Ferritin-like domain DKC18_001850 PF04324 BFD-like [2Fe-2S] binding domain DKC18_001860 PF13291 ACT domain DKC18_001860 PF04607 Region found in RelA / SpoT proteins DKC18_001860 PF02824 TGS domain DKC18_001870 PF01192 RNA polymerase Rpb6 DKC18_001875 PF00625 Guanylate kinase DKC18_001920 PF00886 Ribosomal protein S16 DKC18_001925 PF05239 PRC-barrel domain DKC18_001925 PF01782 RimM N-terminal domain DKC18_001930 PF01746 tRNA (Guanine-1)-methyltransferase DKC18_001940 PF00561 alpha/beta hydrolase fold DKC18_001950 PF16198 tRNA pseudouridylate synthase B C-terminal domain DKC18_001950 PF09157 Pseudouridine synthase II TruB, C-terminal DKC18_001950 PF01509 TruB family pseudouridylate synthase (N terminal domain) DKC18_001955 PF01925 Sulfite exporter TauE/SafE DKC18_001965 PF00892 EamA-like transporter family DKC18_001970 PF00892 EamA-like transporter family DKC18_001975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKC18_001975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKC18_001995 PF03992 Antibiotic biosynthesis monooxygenase DKC18_002000 PF02525 Flavodoxin-like fold DKC18_002020 PF00080 Copper/zinc superoxide dismutase (SODC) DKC18_002070 PF00202 Aminotransferase class-III DKC18_002075 PF04958 Arginine N-succinyltransferase beta subunit DKC18_002085 PF04996 Succinylarginine dihydrolase DKC18_002120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_002120 PF03466 LysR substrate binding domain DKC18_002125 PF00892 EamA-like transporter family DKC18_002135 PF02092 Glycyl-tRNA synthetase beta subunit DKC18_002135 PF05746 DALR anticodon binding domain DKC18_002140 PF02091 Glycyl-tRNA synthetase alpha subunit DKC18_002170 PF04024 PspC domain DKC18_002180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKC18_002180 PF02770 Acyl-CoA dehydrogenase, middle domain DKC18_002180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKC18_002180 PF12806 Acetyl-CoA dehydrogenase C-terminal like DKC18_002190 PF08501 Shikimate dehydrogenase substrate binding domain DKC18_002190 PF01488 Shikimate / quinate 5-dehydrogenase DKC18_002190 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DKC18_002200 PF00925 GTP cyclohydrolase II DKC18_002210 PF00459 Inositol monophosphatase family DKC18_002225 PF02405 Permease MlaE DKC18_002235 PF05494 MlaC protein DKC18_002245 PF01544 CorA-like Mg2+ transporter protein DKC18_002250 PF03641 Possible lysine decarboxylase DKC18_002255 PF00293 NUDIX domain DKC18_002260 PF00156 Phosphoribosyl transferase domain DKC18_002280 PF01553 Acyltransferase DKC18_002290 PF00375 Sodium:dicarboxylate symporter family DKC18_002305 PF02082 Transcriptional regulator DKC18_002310 PF00042 Globin DKC18_002310 PF00175 Oxidoreductase NAD-binding domain DKC18_002310 PF00970 Oxidoreductase FAD-binding domain DKC18_002325 PF01053 Cys/Met metabolism PLP-dependent enzyme DKC18_002330 PF00117 Glutamine amidotransferase class-I DKC18_002335 PF00338 Ribosomal protein S10p/S20e DKC18_002340 PF00297 Ribosomal protein L3 DKC18_002350 PF00276 Ribosomal protein L23 DKC18_002355 PF03947 Ribosomal Proteins L2, C-terminal domain DKC18_002355 PF00181 Ribosomal Proteins L2, RNA binding domain DKC18_002360 PF00203 Ribosomal protein S19 DKC18_002365 PF00237 Ribosomal protein L22p/L17e DKC18_002370 PF00189 Ribosomal protein S3, C-terminal domain DKC18_002370 PF07650 KH domain DKC18_002375 PF00252 Ribosomal protein L16p/L10e DKC18_002380 PF00831 Ribosomal L29 protein DKC18_002385 PF00366 Ribosomal protein S17 DKC18_002400 PF00673 ribosomal L5P family C-terminus DKC18_002400 PF00281 Ribosomal protein L5 DKC18_002405 PF00253 Ribosomal protein S14p/S29e DKC18_002410 PF00410 Ribosomal protein S8 DKC18_002415 PF00347 Ribosomal protein L6 DKC18_002420 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DKC18_002425 PF00333 Ribosomal protein S5, N-terminal domain DKC18_002425 PF03719 Ribosomal protein S5, C-terminal domain DKC18_002430 PF00327 Ribosomal protein L30p/L7e DKC18_002435 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DKC18_002445 PF00444 Ribosomal protein L36 DKC18_002450 PF00416 Ribosomal protein S13/S18 DKC18_002455 PF00411 Ribosomal protein S11 DKC18_002460 PF01479 S4 domain DKC18_002460 PF00163 Ribosomal protein S4/S9 N-terminal domain DKC18_002470 PF01196 Ribosomal protein L17 DKC18_002475 PF00743 Flavin-binding monooxygenase-like DKC18_002485 PF03937 Flavinator of succinate dehydrogenase DKC18_002520 PF09526 Probable metal-binding protein (DUF2387) DKC18_002525 PF01432 Peptidase family M3 DKC18_002575 PF01557 Fumarylacetoacetate (FAA) hydrolase family DKC18_002580 PF12833 Helix-turn-helix domain DKC18_002585 PF00892 EamA-like transporter family DKC18_002590 PF03631 Virulence factor BrkB DKC18_002595 PF03358 NADPH-dependent FMN reductase DKC18_002620 PF02130 Uncharacterized protein family UPF0054 DKC18_002625 PF02562 PhoH-like protein DKC18_002635 PF01551 Peptidase family M23 DKC18_002635 PF10145 Phage-related minor tail protein DKC18_002635 PF01464 Transglycosylase SLT domain DKC18_002645 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DKC18_002645 PF00056 lactate/malate dehydrogenase, NAD binding domain DKC18_002665 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DKC18_002670 PF01066 CDP-alcohol phosphatidyltransferase DKC18_002715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKC18_002715 PF02770 Acyl-CoA dehydrogenase, middle domain DKC18_002715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKC18_002750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKC18_002750 PF00364 Biotin-requiring enzyme DKC18_002750 PF00289 Biotin carboxylase, N-terminal domain DKC18_002750 PF02785 Biotin carboxylase C-terminal domain DKC18_002780 PF04386 Stringent starvation protein B DKC18_002790 PF00380 Ribosomal protein S9/S16 DKC18_002800 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DKC18_002805 PF00398 Ribosomal RNA adenine dimethylase DKC18_002840 PF13091 PLD-like domain DKC18_002845 PF00149 Calcineurin-like phosphoesterase DKC18_002845 PF10518 TAT (twin-arginine translocation) pathway signal sequence DKC18_002850 PF01389 OmpA-like transmembrane domain DKC18_002850 PF00691 OmpA family DKC18_002900 PF00753 Metallo-beta-lactamase superfamily DKC18_002900 PF04273 Putative phosphatase (DUF442) DKC18_002905 PF00561 alpha/beta hydrolase fold DKC18_002910 PF00085 Thioredoxin DKC18_002915 PF03061 Thioesterase superfamily DKC18_002930 PF04461 Protein of unknown function (DUF520) DKC18_002955 PF04279 Intracellular septation protein A DKC18_002970 PF04002 RadC-like JAB domain DKC18_002975 PF02441 Flavoprotein DKC18_002975 PF04127 DNA / pantothenate metabolism flavoprotein DKC18_002990 PF02699 Preprotein translocase subunit DKC18_002995 PF01702 Queuine tRNA-ribosyltransferase DKC18_003010 PF02547 Queuosine biosynthesis protein DKC18_003025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKC18_003025 PF00512 His Kinase A (phospho-acceptor) domain DKC18_003025 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKC18_003025 PF00072 Response regulator receiver domain DKC18_003060 PF00535 Glycosyl transferase family 2 DKC18_003090 PF17103 Stealth protein CR4, conserved region 4 DKC18_003090 PF11380 Stealth protein CR2, conserved region 2 DKC18_003090 PF17101 Stealth protein CR1, conserved region 1 DKC18_003105 PF00593 TonB dependent receptor DKC18_003105 PF07715 TonB-dependent Receptor Plug Domain DKC18_003125 PF06146 Phosphate-starvation-inducible E DKC18_003130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKC18_003130 PF02770 Acyl-CoA dehydrogenase, middle domain DKC18_003130 PF12806 Acetyl-CoA dehydrogenase C-terminal like DKC18_003130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKC18_003135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKC18_003135 PF12806 Acetyl-CoA dehydrogenase C-terminal like DKC18_003135 PF02770 Acyl-CoA dehydrogenase, middle domain DKC18_003135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKC18_003150 PF00072 Response regulator receiver domain DKC18_003150 PF00486 Transcriptional regulatory protein, C terminal DKC18_003190 PF00291 Pyridoxal-phosphate dependent enzyme DKC18_003220 PF00290 Tryptophan synthase alpha chain DKC18_003230 PF08245 Mur ligase middle domain DKC18_003230 PF02875 Mur ligase family, glutamate ligase domain DKC18_003245 PF00753 Metallo-beta-lactamase superfamily DKC18_003300 PF02803 Thiolase, C-terminal domain DKC18_003300 PF00108 Thiolase, N-terminal domain DKC18_003305 PF12833 Helix-turn-helix domain DKC18_003305 PF02311 AraC-like ligand binding domain DKC18_003315 PF04966 Carbohydrate-selective porin, OprB family DKC18_003320 PF01011 PQQ enzyme repeat DKC18_003325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DKC18_003325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DKC18_003335 PF00893 Small Multidrug Resistance protein DKC18_003365 PF00324 Amino acid permease DKC18_003385 PF01741 Large-conductance mechanosensitive channel, MscL DKC18_003415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKC18_003420 PF03547 Membrane transport protein DKC18_003430 PF13098 Thioredoxin-like domain DKC18_003430 PF10411 Disulfide bond isomerase protein N-terminus DKC18_003445 PF04343 Protein of unknown function, DUF488 DKC18_003450 PF03831 PhnA domain DKC18_003450 PF08274 PhnA Zinc-Ribbon DKC18_003455 PF07411 Domain of unknown function (DUF1508) DKC18_003485 PF00072 Response regulator receiver domain DKC18_003495 PF01546 Peptidase family M20/M25/M40 DKC18_003495 PF07687 Peptidase dimerisation domain DKC18_003510 PF04304 Protein of unknown function (DUF454) DKC18_003515 PF17969 L,D-transpeptidase C-terminal domain DKC18_003515 PF03734 L,D-transpeptidase catalytic domain DKC18_003575 PF00881 Nitroreductase family DKC18_003590 PF01235 Sodium:alanine symporter family DKC18_003595 PF01734 Patatin-like phospholipase DKC18_003630 PF02637 GatB domain DKC18_003630 PF02934 GatB/GatE catalytic domain DKC18_003640 PF02686 Glu-tRNAGln amidotransferase C subunit DKC18_003650 PF04085 rod shape-determining protein MreC DKC18_003685 PF01507 Phosphoadenosine phosphosulfate reductase family DKC18_003700 PF02525 Flavodoxin-like fold DKC18_003705 PF02311 AraC-like ligand binding domain DKC18_003705 PF12833 Helix-turn-helix domain DKC18_003720 PF02673 Bacitracin resistance protein BacA DKC18_003725 PF12833 Helix-turn-helix domain DKC18_003725 PF06719 AraC-type transcriptional regulator N-terminus DKC18_003730 PF08990 Erythronolide synthase docking DKC18_003730 PF00550 Phosphopantetheine attachment site DKC18_003730 PF00109 Beta-ketoacyl synthase, N-terminal domain DKC18_003730 PF16197 Ketoacyl-synthetase C-terminal extension DKC18_003730 PF14765 Polyketide synthase dehydratase DKC18_003730 PF09277 Erythronolide synthase, docking DKC18_003730 PF08240 Alcohol dehydrogenase GroES-like domain DKC18_003730 PF02801 Beta-ketoacyl synthase, C-terminal domain DKC18_003730 PF00698 Acyl transferase domain DKC18_003730 PF08659 KR domain DKC18_003735 PF01965 DJ-1/PfpI family DKC18_003755 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DKC18_003760 PF00293 NUDIX domain DKC18_003760 PF09297 NADH pyrophosphatase zinc ribbon domain DKC18_003785 PF01145 SPFH domain / Band 7 family DKC18_003795 PF01734 Patatin-like phospholipase DKC18_003820 PF00486 Transcriptional regulatory protein, C terminal DKC18_003820 PF00072 Response regulator receiver domain DKC18_003825 PF00512 His Kinase A (phospho-acceptor) domain DKC18_003825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKC18_003825 PF08521 Two-component sensor kinase N-terminal DKC18_003890 PF01906 Putative heavy-metal-binding DKC18_003895 PF01906 Putative heavy-metal-binding DKC18_003910 PF00529 HlyD membrane-fusion protein of T1SS DKC18_003910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKC18_003925 PF00348 Polyprenyl synthetase DKC18_003935 PF00829 Ribosomal prokaryotic L21 protein DKC18_003940 PF01016 Ribosomal L27 protein DKC18_003955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DKC18_003955 PF02403 Seryl-tRNA synthetase N-terminal domain DKC18_003965 PF00588 SpoU rRNA Methylase family DKC18_003970 PF01638 HxlR-like helix-turn-helix DKC18_003985 PF00465 Iron-containing alcohol dehydrogenase DKC18_003995 PF03099 Biotin/lipoate A/B protein ligase family DKC18_004000 PF04359 Protein of unknown function (DUF493) DKC18_004005 PF03979 Sigma-70 factor, region 1.1 DKC18_004005 PF04546 Sigma-70, non-essential region DKC18_004005 PF04545 Sigma-70, region 4 DKC18_004005 PF04539 Sigma-70 region 3 DKC18_004005 PF00140 Sigma-70 factor, region 1.2 DKC18_004005 PF04542 Sigma-70 region 2 DKC18_004030 PF00285 Citrate synthase, C-terminal domain DKC18_004035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKC18_004040 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKC18_004045 PF00890 FAD binding domain DKC18_004045 PF02910 Fumarate reductase flavoprotein C-term DKC18_004050 PF13085 2Fe-2S iron-sulfur cluster binding domain DKC18_004065 PF16078 2-oxoglutarate dehydrogenase N-terminus DKC18_004065 PF02779 Transketolase, pyrimidine binding domain DKC18_004065 PF16870 2-oxoglutarate dehydrogenase C-terminal DKC18_004065 PF00676 Dehydrogenase E1 component DKC18_004070 PF02817 e3 binding domain DKC18_004070 PF00364 Biotin-requiring enzyme DKC18_004070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKC18_004080 PF08442 ATP-grasp domain DKC18_004080 PF00549 CoA-ligase DKC18_004085 PF00549 CoA-ligase DKC18_004085 PF02629 CoA binding domain DKC18_004090 PF00579 tRNA synthetases class I (W and Y) DKC18_004095 PF05661 Protein of unknown function (DUF808) DKC18_004170 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKC18_004180 PF00582 Universal stress protein family DKC18_004185 PF00132 Bacterial transferase hexapeptide (six repeats) DKC18_004190 PF01042 Endoribonuclease L-PSP DKC18_004195 PF00440 Bacterial regulatory proteins, tetR family DKC18_004205 PF02142 MGS-like domain DKC18_004205 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DKC18_004205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKC18_004210 PF00117 Glutamine amidotransferase class-I DKC18_004210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DKC18_004225 PF01985 CRS1 / YhbY (CRM) domain DKC18_004230 PF01728 FtsJ-like methyltransferase DKC18_004235 PF17862 AAA+ lid domain DKC18_004235 PF06480 FtsH Extracellular DKC18_004235 PF01434 Peptidase family M41 DKC18_004235 PF00004 ATPase family associated with various cellular activities (AAA) DKC18_004260 PF09423 PhoD-like phosphatase DKC18_004260 PF16655 PhoD-like phosphatase, N-terminal domain DKC18_004275 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DKC18_004275 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DKC18_004290 PF00083 Sugar (and other) transporter DKC18_004295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DKC18_004295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DKC18_004300 PF01266 FAD dependent oxidoreductase DKC18_004300 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DKC18_004305 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DKC18_004305 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DKC18_004310 PF00781 Diacylglycerol kinase catalytic domain DKC18_004315 PF00149 Calcineurin-like phosphoesterase DKC18_004320 PF00166 Chaperonin 10 Kd subunit DKC18_004415 PF00873 AcrB/AcrD/AcrF family DKC18_004435 PF07690 Major Facilitator Superfamily DKC18_004475 PF00589 Phage integrase family DKC18_004475 PF14659 Phage integrase, N-terminal SAM-like domain DKC18_004475 PF13356 Arm DNA-binding domain DKC18_004480 PF01219 Prokaryotic diacylglycerol kinase DKC18_004485 PF00753 Metallo-beta-lactamase superfamily DKC18_004490 PF03009 Glycerophosphoryl diester phosphodiesterase family DKC18_004505 PF01435 Peptidase family M48 DKC18_004510 PF01464 Transglycosylase SLT domain DKC18_004520 PF01171 PP-loop family DKC18_004550 PF00550 Phosphopantetheine attachment site DKC18_004550 PF00975 Thioesterase domain DKC18_004550 PF13193 AMP-binding enzyme C-terminal domain DKC18_004550 PF00501 AMP-binding enzyme DKC18_004550 PF00668 Condensation domain DKC18_004560 PF09857 Putative toxin of bacterial toxin-antitoxin pair DKC18_004650 PF00216 Bacterial DNA-binding protein DKC18_004740 PF04233 Phage Mu protein F like protein DKC18_004860 PF00440 Bacterial regulatory proteins, tetR family DKC18_004870 PF00561 alpha/beta hydrolase fold DKC18_004870 PF00364 Biotin-requiring enzyme DKC18_004890 PF00529 HlyD membrane-fusion protein of T1SS DKC18_004890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKC18_004925 PF02634 FdhD/NarQ family DKC18_004930 PF06803 Protein of unknown function (DUF1232) DKC18_004940 PF00152 tRNA synthetases class II (D, K and N) DKC18_004950 PF18073 Rubredoxin metal binding domain DKC18_004960 PF00324 Amino acid permease DKC18_004975 PF01678 Diaminopimelate epimerase DKC18_004980 PF00561 alpha/beta hydrolase fold DKC18_004985 PF01810 LysE type translocator DKC18_004990 PF00589 Phage integrase family DKC18_004990 PF02899 Phage integrase, N-terminal SAM-like domain DKC18_004995 PF01012 Electron transfer flavoprotein domain DKC18_005000 PF00766 Electron transfer flavoprotein FAD-binding domain DKC18_005000 PF01012 Electron transfer flavoprotein domain DKC18_005010 PF00753 Metallo-beta-lactamase superfamily DKC18_005010 PF16123 Hydroxyacylglutathione hydrolase C-terminus DKC18_005015 PF00521 DNA gyrase/topoisomerase IV, subunit A DKC18_005015 PF03989 DNA gyrase C-terminal domain, beta-propeller DKC18_005060 PF13533 Biotin-lipoyl like DKC18_005070 PF00266 Aminotransferase class-V DKC18_005080 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DKC18_005090 PF12704 MacB-like periplasmic core domain DKC18_005090 PF02687 FtsX-like permease family DKC18_005095 PF00005 ABC transporter DKC18_005110 PF01343 Peptidase family S49 DKC18_005110 PF06965 Na+/H+ antiporter 1 DKC18_005115 PF12697 Alpha/beta hydrolase family DKC18_005120 PF00551 Formyl transferase DKC18_005125 PF02769 AIR synthase related protein, C-terminal domain DKC18_005125 PF00586 AIR synthase related protein, N-terminal domain DKC18_005130 PF01594 AI-2E family transporter DKC18_005135 PF11638 DnaA N-terminal domain DKC18_005135 PF08299 Bacterial dnaA protein helix-turn-helix DKC18_005135 PF00308 Bacterial dnaA protein DKC18_005165 PF00588 SpoU rRNA Methylase family DKC18_005165 PF08032 RNA 2'-O ribose methyltransferase substrate binding DKC18_005180 PF00691 OmpA family DKC18_005205 PF03061 Thioesterase superfamily DKC18_005215 PF05491 RuvB C-terminal winged helix domain DKC18_005215 PF05496 Holliday junction DNA helicase RuvB P-loop domain DKC18_005215 PF17864 RuvB AAA lid domain DKC18_005220 PF01330 RuvA N terminal domain DKC18_005220 PF07499 RuvA, C-terminal domain DKC18_005230 PF01966 HD domain DKC18_005235 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DKC18_005235 PF02769 AIR synthase related protein, C-terminal domain DKC18_005235 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DKC18_005255 PF01784 NIF3 (NGG1p interacting factor 3) DKC18_005260 PF00378 Enoyl-CoA hydratase/isomerase DKC18_005265 PF00293 NUDIX domain DKC18_005265 PF01467 Cytidylyltransferase-like DKC18_005280 PF00578 AhpC/TSA family DKC18_005295 PF06508 Queuosine biosynthesis protein QueC DKC18_005300 PF04055 Radical SAM superfamily DKC18_005315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_005315 PF03466 LysR substrate binding domain DKC18_005320 PF00005 ABC transporter DKC18_005320 PF12857 TOBE-like domain DKC18_005325 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_005330 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_005345 PF01063 Amino-transferase class IV DKC18_005350 PF02618 YceG-like family DKC18_005365 PF02910 Fumarate reductase flavoprotein C-term DKC18_005365 PF00890 FAD binding domain DKC18_005370 PF13180 PDZ domain DKC18_005385 PF00679 Elongation factor G C-terminus DKC18_005385 PF03144 Elongation factor Tu domain 2 DKC18_005385 PF06421 GTP-binding protein LepA C-terminus DKC18_005385 PF00009 Elongation factor Tu GTP binding domain DKC18_005400 PF14622 Ribonuclease-III-like DKC18_005400 PF00035 Double-stranded RNA binding motif DKC18_005405 PF07650 KH domain DKC18_005405 PF01926 50S ribosome-binding GTPase DKC18_005420 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DKC18_005430 PF00106 short chain dehydrogenase DKC18_005490 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKC18_005490 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKC18_005505 PF01926 50S ribosome-binding GTPase DKC18_005505 PF01018 GTP1/OBG DKC18_005510 PF01472 PUA domain DKC18_005510 PF00696 Amino acid kinase family DKC18_005590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKC18_005600 PF00768 D-alanyl-D-alanine carboxypeptidase DKC18_005600 PF07943 Penicillin-binding protein 5, C-terminal domain DKC18_005645 PF06779 Uncharacterised MFS-type transporter YbfB DKC18_005665 PF05193 Peptidase M16 inactive domain DKC18_005665 PF00675 Insulinase (Peptidase family M16) DKC18_005690 PF02581 Thiamine monophosphate synthase DKC18_005695 PF00202 Aminotransferase class-III DKC18_005705 PF00849 RNA pseudouridylate synthase DKC18_005710 PF00271 Helicase conserved C-terminal domain DKC18_005710 PF12137 RNA polymerase recycling family C-terminal DKC18_005710 PF00176 SNF2 family N-terminal domain DKC18_005710 PF18337 RapA N-terminal Tudor like domain DKC18_005710 PF18339 RapA N-terminal Tudor like domain 1 DKC18_005730 PF00487 Fatty acid desaturase DKC18_005750 PF00202 Aminotransferase class-III DKC18_005760 PF00171 Aldehyde dehydrogenase family DKC18_005770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DKC18_005770 PF00205 Thiamine pyrophosphate enzyme, central domain DKC18_005770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DKC18_005780 PF12849 PBP superfamily domain DKC18_005785 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_005795 PF00005 ABC transporter DKC18_005820 PF00206 Lyase DKC18_005820 PF08328 Adenylosuccinate lyase C-terminal DKC18_005845 PF07943 Penicillin-binding protein 5, C-terminal domain DKC18_005845 PF00768 D-alanyl-D-alanine carboxypeptidase DKC18_005870 PF03466 LysR substrate binding domain DKC18_005870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_005885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKC18_005895 PF01197 Ribosomal protein L31 DKC18_005910 PF04055 Radical SAM superfamily DKC18_005915 PF09285 Elongation factor P, C-terminal DKC18_005915 PF08207 Elongation factor P (EF-P) KOW-like domain DKC18_005915 PF01132 Elongation factor P (EF-P) OB domain DKC18_005925 PF04328 Selenoprotein, putative DKC18_006030 PF17954 Quercetinase C-terminal cupin domain DKC18_006030 PF02678 Pirin DKC18_006045 PF01208 Uroporphyrinogen decarboxylase (URO-D) DKC18_006095 PF01713 Smr domain DKC18_006100 PF00218 Indole-3-glycerol phosphate synthase DKC18_006105 PF00591 Glycosyl transferase family, a/b domain DKC18_006105 PF02885 Glycosyl transferase family, helical bundle domain DKC18_006120 PF00117 Glutamine amidotransferase class-I DKC18_006145 PF01040 UbiA prenyltransferase family DKC18_006180 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DKC18_006180 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DKC18_006185 PF01784 NIF3 (NGG1p interacting factor 3) DKC18_006200 PF01515 Phosphate acetyl/butaryl transferase DKC18_006200 PF00390 Malic enzyme, N-terminal domain DKC18_006200 PF03949 Malic enzyme, NAD binding domain DKC18_006245 PF04055 Radical SAM superfamily DKC18_006250 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKC18_006250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKC18_006260 PF07690 Major Facilitator Superfamily DKC18_006270 PF00557 Metallopeptidase family M24 DKC18_006290 PF12833 Helix-turn-helix domain DKC18_006310 PF03330 Lytic transglycolase DKC18_006310 PF05036 Sporulation related domain DKC18_006315 PF13406 Transglycosylase SLT domain DKC18_006335 PF01061 ABC-2 type transporter DKC18_006340 PF00005 ABC transporter DKC18_006370 PF02321 Outer membrane efflux protein DKC18_006395 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_006400 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_006405 PF00005 ABC transporter DKC18_006410 PF00893 Small Multidrug Resistance protein DKC18_006415 PF12838 4Fe-4S dicluster domain DKC18_006430 PF02567 Phenazine biosynthesis-like protein DKC18_006455 PF04076 Bacterial OB fold (BOF) protein DKC18_006485 PF00912 Transglycosylase DKC18_006485 PF00905 Penicillin binding protein transpeptidase domain DKC18_006485 PF14814 Bifunctional transglycosylase second domain DKC18_006490 PF01513 ATP-NAD kinase DKC18_006495 PF07023 Protein of unknown function (DUF1315) DKC18_006500 PF02885 Glycosyl transferase family, helical bundle domain DKC18_006500 PF00591 Glycosyl transferase family, a/b domain DKC18_006515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKC18_006515 PF02770 Acyl-CoA dehydrogenase, middle domain DKC18_006515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKC18_006530 PF00800 Prephenate dehydratase DKC18_006530 PF01817 Chorismate mutase type II DKC18_006530 PF01842 ACT domain DKC18_006545 PF03781 Sulfatase-modifying factor enzyme 1 DKC18_006555 PF00753 Metallo-beta-lactamase superfamily DKC18_006565 PF03883 Peroxide stress protein YaaA DKC18_006580 PF04241 Protein of unknown function (DUF423) DKC18_006585 PF04545 Sigma-70, region 4 DKC18_006585 PF04542 Sigma-70 region 2 DKC18_006585 PF00140 Sigma-70 factor, region 1.2 DKC18_006595 PF00313 'Cold-shock' DNA-binding domain DKC18_006615 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DKC18_006615 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DKC18_006635 PF01180 Dihydroorotate dehydrogenase DKC18_006640 PF02674 Colicin V production protein DKC18_006645 PF00156 Phosphoribosyl transferase domain DKC18_006670 PF09424 Yqey-like protein DKC18_006675 PF01165 Ribosomal protein S21 DKC18_006680 PF00814 Glycoprotease family DKC18_006780 PF00202 Aminotransferase class-III DKC18_006790 PF00324 Amino acid permease DKC18_006810 PF13649 Methyltransferase domain DKC18_006835 PF00561 alpha/beta hydrolase fold DKC18_006840 PF03616 Sodium/glutamate symporter DKC18_006910 PF12146 Serine aminopeptidase, S33 DKC18_006920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_006920 PF03466 LysR substrate binding domain DKC18_006960 PF04403 Paraquat-inducible protein A DKC18_006965 PF02470 MlaD protein DKC18_006975 PF00576 HIUase/Transthyretin family DKC18_006985 PF00072 Response regulator receiver domain DKC18_006985 PF00486 Transcriptional regulatory protein, C terminal DKC18_006990 PF00512 His Kinase A (phospho-acceptor) domain DKC18_006990 PF00672 HAMP domain DKC18_006990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKC18_007030 PF08521 Two-component sensor kinase N-terminal DKC18_007030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKC18_007030 PF00512 His Kinase A (phospho-acceptor) domain DKC18_007035 PF00486 Transcriptional regulatory protein, C terminal DKC18_007035 PF00072 Response regulator receiver domain DKC18_007050 PF00892 EamA-like transporter family DKC18_007055 PF07995 Glucose / Sorbosone dehydrogenase DKC18_007075 PF00375 Sodium:dicarboxylate symporter family DKC18_007085 PF16123 Hydroxyacylglutathione hydrolase C-terminus DKC18_007085 PF00753 Metallo-beta-lactamase superfamily DKC18_007090 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_007110 PF13333 Integrase core domain DKC18_007110 PF00665 Integrase core domain DKC18_007110 PF13276 HTH-like domain DKC18_007130 PF02954 Bacterial regulatory protein, Fis family DKC18_007170 PF08379 Bacterial transglutaminase-like N-terminal region DKC18_007170 PF01841 Transglutaminase-like superfamily DKC18_007180 PF00842 Alanine racemase, C-terminal domain DKC18_007180 PF01168 Alanine racemase, N-terminal domain DKC18_007185 PF03796 DnaB-like helicase C terminal domain DKC18_007185 PF00772 DnaB-like helicase N terminal domain DKC18_007190 PF01281 Ribosomal protein L9, N-terminal domain DKC18_007190 PF03948 Ribosomal protein L9, C-terminal domain DKC18_007195 PF01084 Ribosomal protein S18 DKC18_007200 PF01250 Ribosomal protein S6 DKC18_007205 PF01040 UbiA prenyltransferase family DKC18_007210 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DKC18_007220 PF00115 Cytochrome C and Quinol oxidase polypeptide I DKC18_007235 PF00391 PEP-utilising enzyme, mobile domain DKC18_007235 PF02896 PEP-utilising enzyme, TIM barrel domain DKC18_007235 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DKC18_007240 PF03618 Kinase/pyrophosphorylase DKC18_007260 PF00535 Glycosyl transferase family 2 DKC18_007265 PF13994 PgaD-like protein DKC18_007275 PF00296 Luciferase-like monooxygenase DKC18_007295 PF03466 LysR substrate binding domain DKC18_007295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_007310 PF03462 PCRF domain DKC18_007310 PF00472 RF-1 domain DKC18_007320 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_007330 PF12833 Helix-turn-helix domain DKC18_007335 PF00106 short chain dehydrogenase DKC18_007345 PF13193 AMP-binding enzyme C-terminal domain DKC18_007345 PF00501 AMP-binding enzyme DKC18_007350 PF01613 Flavin reductase like domain DKC18_007355 PF00899 ThiF family DKC18_007360 PF03109 ABC1 family DKC18_007375 PF03814 Potassium-transporting ATPase A subunit DKC18_007385 PF02669 K+-transporting ATPase, c chain DKC18_007410 PF03232 Ubiquinone biosynthesis protein COQ7 DKC18_007420 PF17243 POTRA domain TamA domain 1 DKC18_007420 PF07244 Surface antigen variable number repeat DKC18_007420 PF01103 Surface antigen DKC18_007450 PF00027 Cyclic nucleotide-binding domain DKC18_007450 PF00520 Ion transport protein DKC18_007455 PF07690 Major Facilitator Superfamily DKC18_007465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_007465 PF03466 LysR substrate binding domain DKC18_007470 PF04284 Protein of unknown function (DUF441) DKC18_007495 PF00849 RNA pseudouridylate synthase DKC18_007495 PF01479 S4 domain DKC18_007515 PF17209 Hfq protein DKC18_007545 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DKC18_007545 PF00749 tRNA synthetases class I (E and Q), catalytic domain DKC18_007550 PF02540 NAD synthase DKC18_007550 PF00958 GMP synthase C terminal domain DKC18_007550 PF00117 Glutamine amidotransferase class-I DKC18_007560 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DKC18_007565 PF13520 Amino acid permease DKC18_007585 PF00465 Iron-containing alcohol dehydrogenase DKC18_007600 PF06445 GyrI-like small molecule binding domain DKC18_007620 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DKC18_007620 PF11940 Domain of unknown function (DUF3458) Ig-like fold DKC18_007620 PF01433 Peptidase family M1 domain DKC18_007660 PF02798 Glutathione S-transferase, N-terminal domain DKC18_007675 PF01817 Chorismate mutase type II DKC18_007715 PF03328 HpcH/HpaI aldolase/citrate lyase family DKC18_007745 PF00924 Mechanosensitive ion channel DKC18_007815 PF02308 MgtC family DKC18_007820 PF03594 Benzoate membrane transport protein DKC18_007825 PF01037 Lrp/AsnC ligand binding domain DKC18_007830 PF01810 LysE type translocator DKC18_007840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_007840 PF03466 LysR substrate binding domain DKC18_007890 PF12170 DNA polymerase III tau subunit V interacting with alpha DKC18_007890 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DKC18_007890 PF12169 DNA polymerase III subunits gamma and tau domain III DKC18_007900 PF03061 Thioesterase superfamily DKC18_007915 PF00857 Isochorismatase family DKC18_007920 PF01638 HxlR-like helix-turn-helix DKC18_007930 PF01451 Low molecular weight phosphotyrosine protein phosphatase DKC18_007935 PF01565 FAD binding domain DKC18_007935 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DKC18_007980 PF13737 Transposase DDE domain DKC18_008010 PF02785 Biotin carboxylase C-terminal domain DKC18_008010 PF00289 Biotin carboxylase, N-terminal domain DKC18_008010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKC18_008015 PF00364 Biotin-requiring enzyme DKC18_008020 PF01220 Dehydroquinase class II DKC18_008035 PF00005 ABC transporter DKC18_008040 PF00486 Transcriptional regulatory protein, C terminal DKC18_008040 PF00072 Response regulator receiver domain DKC18_008050 PF04324 BFD-like [2Fe-2S] binding domain DKC18_008050 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DKC18_008050 PF13806 Rieske-like [2Fe-2S] domain DKC18_008050 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DKC18_008050 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKC18_008050 PF18267 Rubredoxin NAD+ reductase C-terminal domain DKC18_008080 PF06463 Molybdenum Cofactor Synthesis C DKC18_008080 PF04055 Radical SAM superfamily DKC18_008090 PF02391 MoaE protein DKC18_008095 PF00994 Probable molybdopterin binding domain DKC18_008095 PF01967 MoaC family DKC18_008100 PF03454 MoeA C-terminal region (domain IV) DKC18_008100 PF00994 Probable molybdopterin binding domain DKC18_008100 PF03453 MoeA N-terminal region (domain I and II) DKC18_008105 PF01638 HxlR-like helix-turn-helix DKC18_008135 PF02635 DsrE/DsrF-like family DKC18_008140 PF16363 GDP-mannose 4,6 dehydratase DKC18_008180 PF02542 YgbB family DKC18_008190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DKC18_008190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DKC18_008195 PF00440 Bacterial regulatory proteins, tetR family DKC18_008210 PF00919 Uncharacterized protein family UPF0004 DKC18_008210 PF04055 Radical SAM superfamily DKC18_008210 PF18693 TRAM domain DKC18_008215 PF00696 Amino acid kinase family DKC18_008220 PF01765 Ribosome recycling factor DKC18_008245 PF01103 Surface antigen DKC18_008245 PF07244 Surface antigen variable number repeat DKC18_008255 PF00132 Bacterial transferase hexapeptide (six repeats) DKC18_008255 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DKC18_008260 PF07977 FabA-like domain DKC18_008265 PF00132 Bacterial transferase hexapeptide (six repeats) DKC18_008265 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DKC18_008280 PF02631 RecX family DKC18_008285 PF00154 recA bacterial DNA recombination protein DKC18_008290 PF01479 S4 domain DKC18_008295 PF13419 Haloacid dehalogenase-like hydrolase DKC18_008315 PF01037 Lrp/AsnC ligand binding domain DKC18_008345 PF02586 SOS response associated peptidase (SRAP) DKC18_008410 PF05525 Branched-chain amino acid transport protein DKC18_008415 PF00557 Metallopeptidase family M24 DKC18_008430 PF00462 Glutaredoxin DKC18_008435 PF00202 Aminotransferase class-III DKC18_008440 PF01380 SIS domain DKC18_008440 PF00571 CBS domain DKC18_008465 PF02881 SRP54-type protein, helical bundle domain DKC18_008465 PF00448 SRP54-type protein, GTPase domain DKC18_008490 PF08173 Membrane bound YbgT-like protein DKC18_008495 PF02322 Cytochrome bd terminal oxidase subunit II DKC18_008520 PF00294 pfkB family carbohydrate kinase DKC18_008525 PF00593 TonB dependent receptor DKC18_008525 PF07715 TonB-dependent Receptor Plug Domain DKC18_008530 PF05193 Peptidase M16 inactive domain DKC18_008530 PF08367 Peptidase M16C associated DKC18_008530 PF00675 Insulinase (Peptidase family M16) DKC18_008545 PF02080 TrkA-C domain DKC18_008545 PF02254 TrkA-N domain DKC18_008555 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DKC18_008580 PF02617 ATP-dependent Clp protease adaptor protein ClpS DKC18_008590 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DKC18_008595 PF00793 DAHP synthetase I family DKC18_008635 PF00117 Glutamine amidotransferase class-I DKC18_008635 PF06418 CTP synthase N-terminus DKC18_008640 PF00793 DAHP synthetase I family DKC18_008645 PF03952 Enolase, N-terminal domain DKC18_008645 PF00113 Enolase, C-terminal TIM barrel domain DKC18_008660 PF04977 Septum formation initiator DKC18_008665 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DKC18_008670 PF01144 Coenzyme A transferase DKC18_008675 PF01144 Coenzyme A transferase DKC18_008685 PF00206 Lyase DKC18_008685 PF10397 Adenylosuccinate lyase C-terminus DKC18_008710 PF00775 Dioxygenase DKC18_008730 PF13360 PQQ-like domain DKC18_008730 PF01011 PQQ enzyme repeat DKC18_008740 PF04143 Sulphur transport DKC18_008755 PF01614 Bacterial transcriptional regulator DKC18_008755 PF09339 IclR helix-turn-helix domain DKC18_008760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_008760 PF03466 LysR substrate binding domain DKC18_008780 PF00106 short chain dehydrogenase DKC18_008800 PF01425 Amidase DKC18_008840 PF01613 Flavin reductase like domain DKC18_008845 PF12833 Helix-turn-helix domain DKC18_008845 PF02311 AraC-like ligand binding domain DKC18_008850 PF07833 Copper amine oxidase N-terminal domain DKC18_008850 PF02727 Copper amine oxidase, N2 domain DKC18_008850 PF01179 Copper amine oxidase, enzyme domain DKC18_008850 PF02728 Copper amine oxidase, N3 domain DKC18_008870 PF00108 Thiolase, N-terminal domain DKC18_008870 PF02803 Thiolase, C-terminal domain DKC18_008880 PF01144 Coenzyme A transferase DKC18_008885 PF01144 Coenzyme A transferase DKC18_008890 PF04444 Catechol dioxygenase N terminus DKC18_008890 PF00775 Dioxygenase DKC18_008895 PF02426 Muconolactone delta-isomerase DKC18_008900 PF13378 Enolase C-terminal domain-like DKC18_008900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DKC18_008905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_008905 PF03466 LysR substrate binding domain DKC18_008920 PF00920 Dehydratase family DKC18_008925 PF07690 Major Facilitator Superfamily DKC18_008945 PF00561 alpha/beta hydrolase fold DKC18_008960 PF01872 RibD C-terminal domain DKC18_008985 PF08359 YsiA-like protein, C-terminal region DKC18_008985 PF00440 Bacterial regulatory proteins, tetR family DKC18_009010 PF16295 Tetracyclin repressor-like, C-terminal domain DKC18_009010 PF00440 Bacterial regulatory proteins, tetR family DKC18_009035 PF07690 Major Facilitator Superfamily DKC18_009040 PF04909 Amidohydrolase DKC18_009070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKC18_009070 PF00529 HlyD membrane-fusion protein of T1SS DKC18_009085 PF00171 Aldehyde dehydrogenase family DKC18_009110 PF07690 Major Facilitator Superfamily DKC18_009115 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKC18_009115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKC18_009130 PF00005 ABC transporter DKC18_009150 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKC18_009150 PF14572 Phosphoribosyl synthetase-associated domain DKC18_009180 PF01425 Amidase DKC18_009225 PF02824 TGS domain DKC18_009225 PF04607 Region found in RelA / SpoT proteins DKC18_009225 PF13291 ACT domain DKC18_009265 PF00106 short chain dehydrogenase DKC18_009275 PF03466 LysR substrate binding domain DKC18_009275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_009300 PF16527 Two-component sensor protein CpxA, periplasmic domain DKC18_009300 PF00672 HAMP domain DKC18_009300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKC18_009300 PF00512 His Kinase A (phospho-acceptor) domain DKC18_009305 PF00072 Response regulator receiver domain DKC18_009305 PF00486 Transcriptional regulatory protein, C terminal DKC18_009330 PF16970 Type-1 fimbrial protein, A DKC18_009355 PF08240 Alcohol dehydrogenase GroES-like domain DKC18_009355 PF00107 Zinc-binding dehydrogenase DKC18_009390 PF13091 PLD-like domain DKC18_009420 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DKC18_009425 PF03070 TENA/THI-4/PQQC family DKC18_009435 PF08042 PqqA family DKC18_009440 PF13089 Polyphosphate kinase N-terminal domain DKC18_009440 PF17941 Polyphosphate kinase C-terminal domain 1 DKC18_009440 PF13090 Polyphosphate kinase C-terminal domain 2 DKC18_009440 PF02503 Polyphosphate kinase middle domain DKC18_009455 PF00593 TonB dependent receptor DKC18_009455 PF07715 TonB-dependent Receptor Plug Domain DKC18_009460 PF00873 AcrB/AcrD/AcrF family DKC18_009465 PF00857 Isochorismatase family DKC18_009465 PF00550 Phosphopantetheine attachment site DKC18_009480 PF00106 short chain dehydrogenase DKC18_009490 PF03621 MbtH-like protein DKC18_009500 PF05977 Transmembrane secretion effector DKC18_009530 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_009540 PF03459 TOBE domain DKC18_009540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_009570 PF01613 Flavin reductase like domain DKC18_009585 PF01738 Dienelactone hydrolase family DKC18_009590 PF07690 Major Facilitator Superfamily DKC18_009615 PF00753 Metallo-beta-lactamase superfamily DKC18_009650 PF03466 LysR substrate binding domain DKC18_009650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_009655 PF01144 Coenzyme A transferase DKC18_009670 PF02803 Thiolase, C-terminal domain DKC18_009670 PF00108 Thiolase, N-terminal domain DKC18_009675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_009675 PF03466 LysR substrate binding domain DKC18_009680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_009680 PF03466 LysR substrate binding domain DKC18_009700 PF00206 Lyase DKC18_009700 PF10415 Fumarase C C-terminus DKC18_009790 PF00005 ABC transporter DKC18_009795 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_009825 PF06445 GyrI-like small molecule binding domain DKC18_009825 PF12833 Helix-turn-helix domain DKC18_009855 PF00753 Metallo-beta-lactamase superfamily DKC18_009855 PF04273 Putative phosphatase (DUF442) DKC18_009865 PF00158 Sigma-54 interaction domain DKC18_009865 PF00072 Response regulator receiver domain DKC18_009865 PF02954 Bacterial regulatory protein, Fis family DKC18_009880 PF00106 short chain dehydrogenase DKC18_009890 PF02817 e3 binding domain DKC18_009890 PF00364 Biotin-requiring enzyme DKC18_009890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKC18_009905 PF04055 Radical SAM superfamily DKC18_009920 PF08448 PAS fold DKC18_009920 PF00990 Diguanylate cyclase, GGDEF domain DKC18_009925 PF01264 Chorismate synthase DKC18_009930 PF05175 Methyltransferase small domain DKC18_009935 PF00291 Pyridoxal-phosphate dependent enzyme DKC18_009945 PF00004 ATPase family associated with various cellular activities (AAA) DKC18_009945 PF01434 Peptidase family M41 DKC18_009945 PF17862 AAA+ lid domain DKC18_009955 PF05166 YcgL domain DKC18_009975 PF01612 3'-5' exonuclease DKC18_009975 PF00570 HRDC domain DKC18_009985 PF02575 YbaB/EbfC DNA-binding family DKC18_010040 PF01230 HIT domain DKC18_010075 PF00005 ABC transporter DKC18_010115 PF01925 Sulfite exporter TauE/SafE DKC18_010120 PF00793 DAHP synthetase I family DKC18_010130 PF00593 TonB dependent receptor DKC18_010130 PF07715 TonB-dependent Receptor Plug Domain DKC18_010145 PF00300 Histidine phosphatase superfamily (branch 1) DKC18_010155 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DKC18_010175 PF04073 Aminoacyl-tRNA editing domain DKC18_010190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKC18_010190 PF02770 Acyl-CoA dehydrogenase, middle domain DKC18_010190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKC18_010210 PF12833 Helix-turn-helix domain DKC18_010210 PF12852 Cupin DKC18_010235 PF02082 Transcriptional regulator DKC18_010240 PF00266 Aminotransferase class-V DKC18_010245 PF01592 NifU-like N terminal domain DKC18_010250 PF01521 Iron-sulphur cluster biosynthesis DKC18_010255 PF00226 DnaJ domain DKC18_010255 PF07743 HSCB C-terminal oligomerisation domain DKC18_010260 PF00012 Hsp70 protein DKC18_010265 PF00111 2Fe-2S iron-sulfur cluster binding domain DKC18_010305 PF13460 NAD(P)H-binding DKC18_010335 PF00005 ABC transporter DKC18_010335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKC18_010340 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_010345 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_010370 PF07715 TonB-dependent Receptor Plug Domain DKC18_010370 PF00593 TonB dependent receptor DKC18_010375 PF03544 Gram-negative bacterial TonB protein C-terminal DKC18_010400 PF01274 Malate synthase DKC18_010425 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DKC18_010435 PF00216 Bacterial DNA-binding protein DKC18_010440 PF00575 S1 RNA binding domain DKC18_010455 PF14437 MafB19-like deaminase DKC18_010465 PF03167 Uracil DNA glycosylase superfamily DKC18_010480 PF11612 Type II secretion system (T2SS), protein J DKC18_010480 PF07963 Prokaryotic N-terminal methylation motif DKC18_010485 PF02501 Type II secretion system (T2SS), protein I DKC18_010485 PF07963 Prokaryotic N-terminal methylation motif DKC18_010500 PF01026 TatD related DNase DKC18_010515 PF02348 Cytidylyltransferase DKC18_010520 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DKC18_010535 PF01618 MotA/TolQ/ExbB proton channel family DKC18_010545 PF13614 AAA domain DKC18_010555 PF00483 Nucleotidyl transferase DKC18_010560 PF01636 Phosphotransferase enzyme family DKC18_010565 PF03968 OstA-like protein DKC18_010565 PF04453 LPS transport system D DKC18_010575 PF01116 Fructose-bisphosphate aldolase class-II DKC18_010585 PF00162 Phosphoglycerate kinase DKC18_010615 PF00375 Sodium:dicarboxylate symporter family DKC18_010620 PF06912 Protein of unknown function (DUF1275) DKC18_010645 PF01597 Glycine cleavage H-protein DKC18_010650 PF02146 Sir2 family DKC18_010655 PF00474 Sodium:solute symporter family DKC18_010675 PF05958 tRNA (Uracil-5-)-methyltransferase DKC18_010695 PF04264 YceI-like domain DKC18_010740 PF02075 Crossover junction endodeoxyribonuclease RuvC DKC18_010745 PF01256 Carbohydrate kinase DKC18_010745 PF03853 YjeF-related protein N-terminus DKC18_010755 PF06968 Biotin and Thiamin Synthesis associated domain DKC18_010755 PF04055 Radical SAM superfamily DKC18_010770 PF16970 Type-1 fimbrial protein, A DKC18_010800 PF00892 EamA-like transporter family DKC18_010810 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DKC18_010840 PF00440 Bacterial regulatory proteins, tetR family DKC18_010855 PF01709 Transcriptional regulator DKC18_010860 PF01037 Lrp/AsnC ligand binding domain DKC18_010870 PF00005 ABC transporter DKC18_010920 PF09383 NIL domain DKC18_010920 PF00005 ABC transporter DKC18_010925 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_010955 PF03591 AzlC protein DKC18_010960 PF05437 Branched-chain amino acid transport protein (AzlD) DKC18_010980 PF00155 Aminotransferase class I and II DKC18_010995 PF00255 Glutathione peroxidase DKC18_011010 PF00375 Sodium:dicarboxylate symporter family DKC18_011025 PF00588 SpoU rRNA Methylase family DKC18_011030 PF00132 Bacterial transferase hexapeptide (six repeats) DKC18_011045 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKC18_011045 PF13192 Thioredoxin domain DKC18_011060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_011060 PF03466 LysR substrate binding domain DKC18_011065 PF01758 Sodium Bile acid symporter family DKC18_011075 PF03960 ArsC family DKC18_011085 PF01979 Amidohydrolase family DKC18_011085 PF13382 Adenine deaminase C-terminal domain DKC18_011125 PF00005 ABC transporter DKC18_011140 PF00083 Sugar (and other) transporter DKC18_011170 PF02322 Cytochrome bd terminal oxidase subunit II DKC18_011210 PF00155 Aminotransferase class I and II DKC18_011210 PF00392 Bacterial regulatory proteins, gntR family DKC18_011215 PF04172 LrgB-like family DKC18_011220 PF03788 LrgA family DKC18_011230 PF02798 Glutathione S-transferase, N-terminal domain DKC18_011230 PF14834 Glutathione S-transferase, C-terminal domain DKC18_011235 PF02798 Glutathione S-transferase, N-terminal domain DKC18_011240 PF03466 LysR substrate binding domain DKC18_011240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_011250 PF00581 Rhodanese-like domain DKC18_011265 PF00266 Aminotransferase class-V DKC18_011275 PF03466 LysR substrate binding domain DKC18_011275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_011280 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKC18_011305 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_011330 PF03466 LysR substrate binding domain DKC18_011330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_011345 PF00072 Response regulator receiver domain DKC18_011360 PF13404 AsnC-type helix-turn-helix domain DKC18_011360 PF01037 Lrp/AsnC ligand binding domain DKC18_011370 PF00717 Peptidase S24-like DKC18_011400 PF18011 C-terminal domain found in long catalases DKC18_011400 PF00199 Catalase DKC18_011400 PF06628 Catalase-related immune-responsive DKC18_011445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_011445 PF03466 LysR substrate binding domain DKC18_011475 PF00440 Bacterial regulatory proteins, tetR family DKC18_011480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKC18_011480 PF02770 Acyl-CoA dehydrogenase, middle domain DKC18_011480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKC18_011490 PF00378 Enoyl-CoA hydratase/isomerase DKC18_011495 PF02785 Biotin carboxylase C-terminal domain DKC18_011495 PF00289 Biotin carboxylase, N-terminal domain DKC18_011495 PF00364 Biotin-requiring enzyme DKC18_011495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKC18_011530 PF07690 Major Facilitator Superfamily DKC18_011545 PF01144 Coenzyme A transferase DKC18_011560 PF00378 Enoyl-CoA hydratase/isomerase DKC18_011575 PF02803 Thiolase, C-terminal domain DKC18_011575 PF00108 Thiolase, N-terminal domain DKC18_011600 PF00378 Enoyl-CoA hydratase/isomerase DKC18_011605 PF09339 IclR helix-turn-helix domain DKC18_011610 PF02515 CoA-transferase family III DKC18_011615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKC18_011615 PF02770 Acyl-CoA dehydrogenase, middle domain DKC18_011615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKC18_011630 PF00266 Aminotransferase class-V DKC18_011635 PF01266 FAD dependent oxidoreductase DKC18_011655 PF00392 Bacterial regulatory proteins, gntR family DKC18_011655 PF07702 UTRA domain DKC18_011660 PF01494 FAD binding domain DKC18_011690 PF12146 Serine aminopeptidase, S33 DKC18_011695 PF12146 Serine aminopeptidase, S33 DKC18_011700 PF03466 LysR substrate binding domain DKC18_011700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_011730 PF16295 Tetracyclin repressor-like, C-terminal domain DKC18_011730 PF00440 Bacterial regulatory proteins, tetR family DKC18_011750 PF00300 Histidine phosphatase superfamily (branch 1) DKC18_011760 PF03061 Thioesterase superfamily DKC18_011765 PF00132 Bacterial transferase hexapeptide (six repeats) DKC18_011775 PF14535 AMP-binding enzyme C-terminal domain DKC18_011775 PF00501 AMP-binding enzyme DKC18_011780 PF00108 Thiolase, N-terminal domain DKC18_011780 PF02803 Thiolase, C-terminal domain DKC18_011795 PF00378 Enoyl-CoA hydratase/isomerase DKC18_011800 PF00970 Oxidoreductase FAD-binding domain DKC18_011800 PF00111 2Fe-2S iron-sulfur cluster binding domain DKC18_011800 PF00175 Oxidoreductase NAD-binding domain DKC18_011805 PF01883 Iron-sulfur cluster assembly protein DKC18_011810 PF05138 Phenylacetic acid catabolic protein DKC18_011815 PF06243 Phenylacetic acid degradation B DKC18_011820 PF05138 Phenylacetic acid catabolic protein DKC18_011830 PF03313 Serine dehydratase alpha chain DKC18_011830 PF03315 Serine dehydratase beta chain DKC18_011840 PF13276 HTH-like domain DKC18_011840 PF00665 Integrase core domain DKC18_011840 PF13333 Integrase core domain DKC18_011880 PF07286 Protein of unknown function (DUF1445) DKC18_011885 PF03746 LamB/YcsF family DKC18_011905 PF08281 Sigma-70, region 4 DKC18_011905 PF04542 Sigma-70 region 2 DKC18_011915 PF05114 Protein of unknown function (DUF692) DKC18_011960 PF06629 MltA-interacting protein MipA DKC18_011965 PF00202 Aminotransferase class-III DKC18_012010 PF05593 RHS Repeat DKC18_012010 PF03527 RHS protein DKC18_012050 PF13411 MerR HTH family regulatory protein DKC18_012050 PF07739 TipAS antibiotic-recognition domain DKC18_012055 PF00313 'Cold-shock' DNA-binding domain DKC18_012060 PF00117 Glutamine amidotransferase class-I DKC18_012065 PF01053 Cys/Met metabolism PLP-dependent enzyme DKC18_012075 PF13404 AsnC-type helix-turn-helix domain DKC18_012075 PF01037 Lrp/AsnC ligand binding domain DKC18_012080 PF06865 Pyrimidine/purine nucleoside phosphorylase DKC18_012095 PF13302 Acetyltransferase (GNAT) domain DKC18_012100 PF07715 TonB-dependent Receptor Plug Domain DKC18_012140 PF16295 Tetracyclin repressor-like, C-terminal domain DKC18_012140 PF00440 Bacterial regulatory proteins, tetR family DKC18_012160 PF00512 His Kinase A (phospho-acceptor) domain DKC18_012160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKC18_012165 PF00072 Response regulator receiver domain DKC18_012165 PF00486 Transcriptional regulatory protein, C terminal DKC18_012210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_012210 PF03466 LysR substrate binding domain DKC18_012225 PF00106 short chain dehydrogenase DKC18_012270 PF00132 Bacterial transferase hexapeptide (six repeats) DKC18_012285 PF00664 ABC transporter transmembrane region DKC18_012285 PF03412 Peptidase C39 family DKC18_012285 PF00005 ABC transporter DKC18_012300 PF00005 ABC transporter DKC18_012300 PF12399 Branched-chain amino acid ATP-binding cassette transporter DKC18_012305 PF03968 OstA-like protein DKC18_012320 PF01380 SIS domain DKC18_012320 PF00571 CBS domain DKC18_012325 PF01406 tRNA synthetases class I (C) catalytic domain DKC18_012325 PF09190 DALR domain DKC18_012390 PF00313 'Cold-shock' DNA-binding domain DKC18_012425 PF13742 OB-fold nucleic acid binding domain DKC18_012425 PF02601 Exonuclease VII, large subunit DKC18_012470 PF00403 Heavy-metal-associated domain DKC18_012485 PF06099 Phenol hydroxylase subunit DKC18_012490 PF02332 Methane/Phenol/Toluene Hydroxylase DKC18_012495 PF02406 MmoB/DmpM family DKC18_012500 PF04945 YHS domain DKC18_012500 PF02332 Methane/Phenol/Toluene Hydroxylase DKC18_012510 PF00970 Oxidoreductase FAD-binding domain DKC18_012510 PF00111 2Fe-2S iron-sulfur cluster binding domain DKC18_012510 PF00175 Oxidoreductase NAD-binding domain DKC18_012525 PF00355 Rieske [2Fe-2S] domain DKC18_012525 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DKC18_012530 PF00866 Ring hydroxylating beta subunit DKC18_012535 PF00970 Oxidoreductase FAD-binding domain DKC18_012535 PF00111 2Fe-2S iron-sulfur cluster binding domain DKC18_012535 PF00175 Oxidoreductase NAD-binding domain DKC18_012540 PF00106 short chain dehydrogenase DKC18_012550 PF13737 Transposase DDE domain DKC18_012565 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DKC18_012565 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DKC18_012575 PF10417 C-terminal domain of 1-Cys peroxiredoxin DKC18_012575 PF00578 AhpC/TSA family DKC18_012595 PF13192 Thioredoxin domain DKC18_012595 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKC18_012605 PF00043 Glutathione S-transferase, C-terminal domain DKC18_012605 PF02798 Glutathione S-transferase, N-terminal domain DKC18_012615 PF02390 Putative methyltransferase DKC18_012620 PF00043 Glutathione S-transferase, C-terminal domain DKC18_012620 PF13417 Glutathione S-transferase, N-terminal domain DKC18_012630 PF13488 Glycine zipper DKC18_012630 PF00691 OmpA family DKC18_012640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DKC18_012640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DKC18_012650 PF02926 THUMP domain DKC18_012650 PF10672 S-adenosylmethionine-dependent methyltransferase DKC18_012650 PF01170 Putative RNA methylase family UPF0020 DKC18_012680 PF02566 OsmC-like protein DKC18_012685 PF13545 Crp-like helix-turn-helix domain DKC18_012685 PF00027 Cyclic nucleotide-binding domain DKC18_012690 PF00248 Aldo/keto reductase family DKC18_012710 PF13393 Histidyl-tRNA synthetase DKC18_012730 PF02599 Global regulator protein family DKC18_012745 PF01292 Prokaryotic cytochrome b561 DKC18_012750 PF00962 Adenosine/AMP deaminase DKC18_012770 PF00106 short chain dehydrogenase DKC18_012785 PF00440 Bacterial regulatory proteins, tetR family DKC18_012785 PF17932 Tetracyclin repressor-like, C-terminal domain DKC18_012795 PF00106 short chain dehydrogenase DKC18_012800 PF00743 Flavin-binding monooxygenase-like DKC18_012810 PF12833 Helix-turn-helix domain DKC18_012810 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DKC18_012815 PF00743 Flavin-binding monooxygenase-like DKC18_012820 PF00106 short chain dehydrogenase DKC18_012875 PF00378 Enoyl-CoA hydratase/isomerase DKC18_012905 PF07519 Tannase and feruloyl esterase DKC18_012920 PF00171 Aldehyde dehydrogenase family DKC18_012925 PF00324 Amino acid permease DKC18_012955 PF07729 FCD domain DKC18_012955 PF00392 Bacterial regulatory proteins, gntR family DKC18_012965 PF00324 Amino acid permease DKC18_012985 PF05643 Putative bacterial lipoprotein (DUF799) DKC18_012995 PF03783 Curli production assembly/transport component CsgG DKC18_013040 PF03180 NLPA lipoprotein DKC18_013065 PF00360 Phytochrome region DKC18_013065 PF00990 Diguanylate cyclase, GGDEF domain DKC18_013065 PF00563 EAL domain DKC18_013065 PF01590 GAF domain DKC18_013100 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKC18_013100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKC18_013110 PF12911 N-terminal TM domain of oligopeptide transport permease C DKC18_013110 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_013125 PF01464 Transglycosylase SLT domain DKC18_013125 PF01476 LysM domain DKC18_013125 PF01464 Transglycosylase SLT domain DKC18_013125 PF01476 LysM domain DKC18_013130 PF00929 Exonuclease DKC18_013150 PF04972 BON domain DKC18_013155 PF02021 Uncharacterised protein family UPF0102 DKC18_013170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_013170 PF03466 LysR substrate binding domain DKC18_013175 PF01810 LysE type translocator DKC18_013185 PF13411 MerR HTH family regulatory protein DKC18_013195 PF01494 FAD binding domain DKC18_013200 PF01494 FAD binding domain DKC18_013250 PF03895 YadA-like membrane anchor domain DKC18_013250 PF13018 Extended Signal Peptide of Type V secretion system DKC18_013250 PF05658 Head domain of trimeric autotransporter adhesin DKC18_013250 PF05662 Coiled stalk of trimeric autotransporter adhesin DKC18_013260 PF05658 Head domain of trimeric autotransporter adhesin DKC18_013260 PF05662 Coiled stalk of trimeric autotransporter adhesin DKC18_013260 PF03895 YadA-like membrane anchor domain DKC18_013260 PF13018 Extended Signal Peptide of Type V secretion system DKC18_013265 PF05362 Lon protease (S16) C-terminal proteolytic domain DKC18_013265 PF02190 ATP-dependent protease La (LON) substrate-binding domain DKC18_013265 PF00004 ATPase family associated with various cellular activities (AAA) DKC18_013270 PF02590 Predicted SPOUT methyltransferase DKC18_013275 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DKC18_013285 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DKC18_013285 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DKC18_013295 PF00633 Helix-hairpin-helix motif DKC18_013295 PF10576 Iron-sulfur binding domain of endonuclease III DKC18_013295 PF00730 HhH-GPD superfamily base excision DNA repair protein DKC18_013305 PF05191 Adenylate kinase, active site lid DKC18_013345 PF01730 UreF DKC18_013350 PF05194 UreE urease accessory protein, C-terminal domain DKC18_013350 PF02814 UreE urease accessory protein, N-terminal domain DKC18_013365 PF00699 Urease beta subunit DKC18_013370 PF00547 Urease, gamma subunit DKC18_013375 PF01774 UreD urease accessory protein DKC18_013390 PF00463 Isocitrate lyase family DKC18_013400 PF01595 Cyclin M transmembrane N-terminal domain DKC18_013400 PF03471 Transporter associated domain DKC18_013400 PF00571 CBS domain DKC18_013420 PF00009 Elongation factor Tu GTP binding domain DKC18_013425 PF01507 Phosphoadenosine phosphosulfate reductase family DKC18_013455 PF00301 Rubredoxin DKC18_013465 PF00561 alpha/beta hydrolase fold DKC18_013470 PF03466 LysR substrate binding domain DKC18_013470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_013485 PF00912 Transglycosylase DKC18_013490 PF01694 Rhomboid family DKC18_013500 PF00005 ABC transporter DKC18_013505 PF13472 GDSL-like Lipase/Acylhydrolase family DKC18_013510 PF00484 Carbonic anhydrase DKC18_013515 PF00561 alpha/beta hydrolase fold DKC18_013525 PF00593 TonB dependent receptor DKC18_013525 PF07715 TonB-dependent Receptor Plug Domain DKC18_013530 PF01521 Iron-sulphur cluster biosynthesis DKC18_013530 PF01106 NifU-like domain DKC18_013540 PF00884 Sulfatase DKC18_013565 PF01384 Phosphate transporter family DKC18_013575 PF02574 Homocysteine S-methyltransferase DKC18_013575 PF00809 Pterin binding enzyme DKC18_013575 PF02965 Vitamin B12 dependent methionine synthase, activation domain DKC18_013575 PF02607 B12 binding domain DKC18_013575 PF02310 B12 binding domain DKC18_013590 PF01263 Aldose 1-epimerase DKC18_013595 PF07690 Major Facilitator Superfamily DKC18_013605 PF04960 Glutaminase DKC18_013610 PF01327 Polypeptide deformylase DKC18_013625 PF00205 Thiamine pyrophosphate enzyme, central domain DKC18_013625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DKC18_013625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DKC18_013630 PF00171 Aldehyde dehydrogenase family DKC18_013635 PF01958 Domain of unknown function DUF108 DKC18_013635 PF03447 Homoserine dehydrogenase, NAD binding domain DKC18_013655 PF07690 Major Facilitator Superfamily DKC18_013665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKC18_013675 PF00355 Rieske [2Fe-2S] domain DKC18_013690 PF09339 IclR helix-turn-helix domain DKC18_013690 PF01614 Bacterial transcriptional regulator DKC18_013705 PF00378 Enoyl-CoA hydratase/isomerase DKC18_013725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKC18_013730 PF07152 YaeQ protein DKC18_013740 PF02492 CobW/HypB/UreG, nucleotide-binding domain DKC18_013740 PF07683 Cobalamin synthesis protein cobW C-terminal domain DKC18_013750 PF03061 Thioesterase superfamily DKC18_013760 PF02028 BCCT, betaine/carnitine/choline family transporter DKC18_013765 PF02028 BCCT, betaine/carnitine/choline family transporter DKC18_013770 PF13977 BetI-type transcriptional repressor, C-terminal DKC18_013770 PF00440 Bacterial regulatory proteins, tetR family DKC18_013785 PF06039 Malate:quinone oxidoreductase (Mqo) DKC18_013800 PF13520 Amino acid permease DKC18_013825 PF07690 Major Facilitator Superfamily DKC18_013830 PF13533 Biotin-lipoyl like DKC18_013890 PF00437 Type II/IV secretion system protein DKC18_013895 PF00437 Type II/IV secretion system protein DKC18_013900 PF01475 Ferric uptake regulator family DKC18_013905 PF04355 SmpA / OmlA family DKC18_013910 PF03658 RnfH family Ubiquitin DKC18_013925 PF01814 Hemerythrin HHE cation binding domain DKC18_013945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKC18_013945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKC18_013945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKC18_013945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKC18_013950 PF00692 dUTPase DKC18_013960 PF13488 Glycine zipper DKC18_013960 PF00691 OmpA family DKC18_013980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DKC18_013985 PF03776 Septum formation topological specificity factor MinE DKC18_013995 PF01810 LysE type translocator DKC18_014000 PF17854 FtsK alpha domain DKC18_014000 PF01580 FtsK/SpoIIIE family DKC18_014000 PF09397 Ftsk gamma domain DKC18_014000 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DKC18_014005 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKC18_014010 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DKC18_014015 PF04376 Arginine-tRNA-protein transferase, N terminus DKC18_014015 PF04377 Arginine-tRNA-protein transferase, C terminus DKC18_014035 PF00009 Elongation factor Tu GTP binding domain DKC18_014035 PF03144 Elongation factor Tu domain 2 DKC18_014035 PF03143 Elongation factor Tu C-terminal domain DKC18_014040 PF03764 Elongation factor G, domain IV DKC18_014040 PF03144 Elongation factor Tu domain 2 DKC18_014040 PF00009 Elongation factor Tu GTP binding domain DKC18_014040 PF00679 Elongation factor G C-terminus DKC18_014040 PF14492 Elongation Factor G, domain II DKC18_014045 PF00177 Ribosomal protein S7p/S5e DKC18_014050 PF00164 Ribosomal protein S12/S23 DKC18_014060 PF02801 Beta-ketoacyl synthase, C-terminal domain DKC18_014060 PF00109 Beta-ketoacyl synthase, N-terminal domain DKC18_014070 PF02678 Pirin DKC18_014070 PF05726 Pirin C-terminal cupin domain DKC18_014080 PF02540 NAD synthase DKC18_014080 PF00795 Carbon-nitrogen hydrolase DKC18_014110 PF07859 alpha/beta hydrolase fold DKC18_014115 PF02028 BCCT, betaine/carnitine/choline family transporter DKC18_014145 PF00037 4Fe-4S binding domain DKC18_014150 PF01467 Cytidylyltransferase-like DKC18_014155 PF01668 SmpB protein DKC18_014175 PF01479 S4 domain DKC18_014175 PF00849 RNA pseudouridylate synthase DKC18_014180 PF13525 Outer membrane lipoprotein DKC18_014190 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DKC18_014190 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DKC18_014190 PF01488 Shikimate / quinate 5-dehydrogenase DKC18_014200 PF03550 Outer membrane lipoprotein LolB DKC18_014230 PF14572 Phosphoribosyl synthetase-associated domain DKC18_014230 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKC18_014235 PF01386 Ribosomal L25p family DKC18_014240 PF01195 Peptidyl-tRNA hydrolase DKC18_014245 PF02261 Aspartate decarboxylase DKC18_014260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DKC18_014270 PF02581 Thiamine monophosphate synthase DKC18_014270 PF03070 TENA/THI-4/PQQC family DKC18_014270 PF08543 Phosphomethylpyrimidine kinase DKC18_014275 PF01476 LysM domain DKC18_014275 PF04972 BON domain DKC18_014280 PF00550 Phosphopantetheine attachment site DKC18_014295 PF01783 Ribosomal L32p protein family DKC18_014300 PF02620 Large ribosomal RNA subunit accumulation protein YceD DKC18_014310 PF01300 Telomere recombination DKC18_014320 PF04079 Segregation and condensation complex subunit ScpB DKC18_014325 PF00849 RNA pseudouridylate synthase DKC18_014325 PF01479 S4 domain DKC18_014340 PF00155 Aminotransferase class I and II DKC18_014345 PF06968 Biotin and Thiamin Synthesis associated domain DKC18_014345 PF04055 Radical SAM superfamily DKC18_014345 PF00202 Aminotransferase class-III DKC18_014360 PF00982 Glycosyltransferase family 20 DKC18_014370 PF00210 Ferritin-like domain DKC18_014415 PF13333 Integrase core domain DKC18_014415 PF13276 HTH-like domain DKC18_014415 PF00665 Integrase core domain DKC18_014430 PF01420 Type I restriction modification DNA specificity domain DKC18_014435 PF02384 N-6 DNA Methylase DKC18_014435 PF12161 HsdM N-terminal domain DKC18_014440 PF01381 Helix-turn-helix DKC18_014440 PF08671 Anti-repressor SinI DKC18_014475 PF01925 Sulfite exporter TauE/SafE DKC18_014500 PF01207 Dihydrouridine synthase (Dus) DKC18_014535 PF00692 dUTPase DKC18_014550 PF01048 Phosphorylase superfamily DKC18_014555 PF10609 NUBPL iron-transfer P-loop NTPase DKC18_014600 PF13533 Biotin-lipoyl like DKC18_014605 PF00291 Pyridoxal-phosphate dependent enzyme DKC18_014620 PF05552 Conserved TM helix DKC18_014635 PF00175 Oxidoreductase NAD-binding domain DKC18_014635 PF00970 Oxidoreductase FAD-binding domain DKC18_014660 PF00361 Proton-conducting membrane transporter DKC18_014665 PF00361 Proton-conducting membrane transporter DKC18_014670 PF00361 Proton-conducting membrane transporter DKC18_014670 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DKC18_014675 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKC18_014680 PF12838 4Fe-4S dicluster domain DKC18_014685 PF00146 NADH dehydrogenase DKC18_014695 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DKC18_014695 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DKC18_014695 PF10531 SLBB domain DKC18_014705 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DKC18_014705 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DKC18_014710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DKC18_014715 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DKC18_014730 PF00672 HAMP domain DKC18_014730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKC18_014730 PF00512 His Kinase A (phospho-acceptor) domain DKC18_014735 PF00486 Transcriptional regulatory protein, C terminal DKC18_014735 PF00072 Response regulator receiver domain DKC18_014755 PF00268 Ribonucleotide reductase, small chain DKC18_014775 PF01613 Flavin reductase like domain DKC18_014795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_014795 PF03466 LysR substrate binding domain DKC18_014835 PF02515 CoA-transferase family III DKC18_014840 PF07690 Major Facilitator Superfamily DKC18_014855 PF08240 Alcohol dehydrogenase GroES-like domain DKC18_014855 PF00107 Zinc-binding dehydrogenase DKC18_014875 PF00929 Exonuclease DKC18_015060 PF01471 Putative peptidoglycan binding domain DKC18_015060 PF01520 N-acetylmuramoyl-L-alanine amidase DKC18_015145 PF01960 ArgJ family DKC18_015150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKC18_015150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKC18_015155 PF00893 Small Multidrug Resistance protein DKC18_015185 PF00834 Ribulose-phosphate 3 epimerase family DKC18_015195 PF00756 Putative esterase DKC18_015205 PF04445 Putative SAM-dependent methyltransferase DKC18_015210 PF00814 Glycoprotease family DKC18_015215 PF00132 Bacterial transferase hexapeptide (six repeats) DKC18_015220 PF00293 NUDIX domain DKC18_015255 PF00155 Aminotransferase class I and II DKC18_015260 PF00815 Histidinol dehydrogenase DKC18_015265 PF01634 ATP phosphoribosyltransferase DKC18_015270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DKC18_015275 PF01722 BolA-like protein DKC18_015330 PF00795 Carbon-nitrogen hydrolase DKC18_015340 PF01047 MarR family DKC18_015375 PF02325 YGGT family DKC18_015380 PF03807 NADP oxidoreductase coenzyme F420-dependent DKC18_015380 PF14748 Pyrroline-5-carboxylate reductase dimerisation DKC18_015390 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DKC18_015400 PF00085 Thioredoxin DKC18_015420 PF00216 Bacterial DNA-binding protein DKC18_015430 PF01409 tRNA synthetases class II core domain (F) DKC18_015430 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DKC18_015450 PF00453 Ribosomal protein L20 DKC18_015455 PF01632 Ribosomal protein L35 DKC18_015460 PF07690 Major Facilitator Superfamily DKC18_015470 PF02798 Glutathione S-transferase, N-terminal domain DKC18_015470 PF00043 Glutathione S-transferase, C-terminal domain DKC18_015475 PF00707 Translation initiation factor IF-3, C-terminal domain DKC18_015475 PF05198 Translation initiation factor IF-3, N-terminal domain DKC18_015485 PF13193 AMP-binding enzyme C-terminal domain DKC18_015485 PF00501 AMP-binding enzyme DKC18_015490 PF04751 Protein of unknown function (DUF615) DKC18_015495 PF00381 PTS HPr component phosphorylation site DKC18_015510 PF02548 Ketopantoate hydroxymethyltransferase DKC18_015515 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DKC18_015540 PF04607 Region found in RelA / SpoT proteins DKC18_015540 PF02824 TGS domain DKC18_015540 PF13291 ACT domain DKC18_015555 PF00291 Pyridoxal-phosphate dependent enzyme DKC18_015560 PF00072 Response regulator receiver domain DKC18_015560 PF01627 Hpt domain DKC18_015560 PF00512 His Kinase A (phospho-acceptor) domain DKC18_015560 PF00672 HAMP domain DKC18_015560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKC18_015560 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DKC18_015565 PF00378 Enoyl-CoA hydratase/isomerase DKC18_015570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKC18_015570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKC18_015585 PF00106 short chain dehydrogenase DKC18_015590 PF02233 NAD(P) transhydrogenase beta subunit DKC18_015605 PF00892 EamA-like transporter family DKC18_015615 PF07690 Major Facilitator Superfamily DKC18_015645 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKC18_015670 PF01022 Bacterial regulatory protein, arsR family DKC18_015675 PF03960 ArsC family DKC18_015705 PF00873 AcrB/AcrD/AcrF family DKC18_015710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKC18_015730 PF07731 Multicopper oxidase DKC18_015730 PF07732 Multicopper oxidase DKC18_015730 PF00394 Multicopper oxidase DKC18_015745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKC18_015745 PF00672 HAMP domain DKC18_015745 PF00512 His Kinase A (phospho-acceptor) domain DKC18_015830 PF01207 Dihydrouridine synthase (Dus) DKC18_015840 PF03466 LysR substrate binding domain DKC18_015840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_015850 PF00899 ThiF family DKC18_015860 PF01026 TatD related DNase DKC18_015875 PF16658 Class II release factor RF3, C-terminal domain DKC18_015875 PF03144 Elongation factor Tu domain 2 DKC18_015875 PF00009 Elongation factor Tu GTP binding domain DKC18_015900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DKC18_015900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DKC18_015905 PF10369 Small subunit of acetolactate synthase DKC18_015910 PF00205 Thiamine pyrophosphate enzyme, central domain DKC18_015910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DKC18_015910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DKC18_015940 PF02687 FtsX-like permease family DKC18_015940 PF00005 ABC transporter DKC18_015940 PF12704 MacB-like periplasmic core domain DKC18_015965 PF03193 RsgA GTPase DKC18_015975 PF00462 Glutaredoxin DKC18_015980 PF02556 Preprotein translocase subunit SecB DKC18_015995 PF01011 PQQ enzyme repeat DKC18_015995 PF13360 PQQ-like domain DKC18_016015 PF13464 Domain of unknown function (DUF4115) DKC18_016025 PF04055 Radical SAM superfamily DKC18_016030 PF00334 Nucleoside diphosphate kinase DKC18_016035 PF04384 Iron-sulphur cluster assembly DKC18_016040 PF01569 PAP2 superfamily DKC18_016045 PF13439 Glycosyltransferase Family 4 DKC18_016045 PF00534 Glycosyl transferases group 1 DKC18_016055 PF00933 Glycosyl hydrolase family 3 N terminal domain DKC18_016065 PF12697 Alpha/beta hydrolase family DKC18_016080 PF01202 Shikimate kinase DKC18_016105 PF00871 Acetokinase family DKC18_016110 PF01515 Phosphate acetyl/butaryl transferase DKC18_016110 PF07085 DRTGG domain DKC18_016115 PF05681 Fumarate hydratase (Fumerase) DKC18_016115 PF05683 Fumarase C-terminus DKC18_016135 PF00574 Clp protease DKC18_016150 PF18331 PKHD-type hydroxylase C-terminal domain DKC18_016150 PF13640 2OG-Fe(II) oxygenase superfamily DKC18_016155 PF08502 LeuA allosteric (dimerisation) domain DKC18_016155 PF00682 HMGL-like DKC18_016165 PF07021 Methionine biosynthesis protein MetW DKC18_016165 PF00561 alpha/beta hydrolase fold DKC18_016185 PF02416 mttA/Hcf106 family DKC18_016190 PF02416 mttA/Hcf106 family DKC18_016225 PF00303 Thymidylate synthase DKC18_016230 PF00186 Dihydrofolate reductase DKC18_016245 PF01625 Peptide methionine sulfoxide reductase DKC18_016250 PF02472 Biopolymer transport protein ExbD/TolR DKC18_016255 PF01618 MotA/TolQ/ExbB proton channel family DKC18_016280 PF00830 Ribosomal L28 family DKC18_016310 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DKC18_016315 PF13361 UvrD-like helicase C-terminal domain DKC18_016315 PF00580 UvrD/REP helicase N-terminal domain DKC18_016340 PF01638 HxlR-like helix-turn-helix DKC18_016345 PF08240 Alcohol dehydrogenase GroES-like domain DKC18_016345 PF00107 Zinc-binding dehydrogenase DKC18_016365 PF01810 LysE type translocator DKC18_016370 PF03279 Bacterial lipid A biosynthesis acyltransferase DKC18_016390 PF02774 Semialdehyde dehydrogenase, dimerisation domain DKC18_016390 PF01118 Semialdehyde dehydrogenase, NAD binding domain DKC18_016410 PF01416 tRNA pseudouridine synthase DKC18_016420 PF01176 Translation initiation factor 1A / IF-1 DKC18_016435 PF00180 Isocitrate/isopropylmalate dehydrogenase DKC18_016500 PF12706 Beta-lactamase superfamily domain DKC18_016515 PF02798 Glutathione S-transferase, N-terminal domain DKC18_016520 PF08279 HTH domain DKC18_016520 PF13280 WYL domain DKC18_016530 PF00849 RNA pseudouridylate synthase DKC18_016530 PF01479 S4 domain DKC18_016560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_016560 PF03466 LysR substrate binding domain DKC18_016570 PF04055 Radical SAM superfamily DKC18_016570 PF06969 HemN C-terminal domain DKC18_016580 PF01554 MatE DKC18_016585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKC18_016585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DKC18_016585 PF02770 Acyl-CoA dehydrogenase, middle domain DKC18_016600 PF01197 Ribosomal protein L31 DKC18_016610 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DKC18_016630 PF03884 DNA gyrase inhibitor YacG DKC18_016635 PF00753 Metallo-beta-lactamase superfamily DKC18_016650 PF01177 Asp/Glu/Hydantoin racemase DKC18_016670 PF01206 Sulfurtransferase TusA DKC18_016675 PF00571 CBS domain DKC18_016675 PF03471 Transporter associated domain DKC18_016680 PF00795 Carbon-nitrogen hydrolase DKC18_016715 PF02254 TrkA-N domain DKC18_016715 PF00999 Sodium/hydrogen exchanger family DKC18_016720 PF01430 Hsp33 protein DKC18_016750 PF00312 Ribosomal protein S15 DKC18_016795 PF01209 ubiE/COQ5 methyltransferase family DKC18_016805 PF03109 ABC1 family DKC18_016820 PF01502 Phosphoribosyl-AMP cyclohydrolase DKC18_016840 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKC18_016845 PF00361 Proton-conducting membrane transporter DKC18_016855 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DKC18_016865 PF02033 Ribosome-binding factor A DKC18_016875 PF13184 NusA-like KH domain DKC18_016875 PF00575 S1 RNA binding domain DKC18_016875 PF08529 NusA N-terminal domain DKC18_016880 PF17384 RimP C-terminal SH3 domain DKC18_016880 PF02576 RimP N-terminal domain DKC18_016900 PF03840 Preprotein translocase SecG subunit DKC18_016905 PF00121 Triosephosphate isomerase DKC18_016915 PF00482 Type II secretion system (T2SS), protein F DKC18_016920 PF06750 Bacterial Peptidase A24 N-terminal domain DKC18_016920 PF01478 Type IV leader peptidase family DKC18_016925 PF01121 Dephospho-CoA kinase DKC18_016935 PF08032 RNA 2'-O ribose methyltransferase substrate binding DKC18_016935 PF00588 SpoU rRNA Methylase family DKC18_016940 PF06865 Pyrimidine/purine nucleoside phosphorylase DKC18_016950 PF02463 RecF/RecN/SMC N terminal domain DKC18_016955 PF02622 Uncharacterized ACR, COG1678 DKC18_016960 PF03652 Holliday junction resolvase DKC18_016990 PF02805 Metal binding domain of Ada DKC18_016990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKC18_016990 PF12833 Helix-turn-helix domain DKC18_016990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKC18_016995 PF01066 CDP-alcohol phosphatidyltransferase DKC18_017005 PF01541 GIY-YIG catalytic domain DKC18_017005 PF02151 UvrB/uvrC motif DKC18_017005 PF08459 UvrC Helix-hairpin-helix N-terminal DKC18_017030 PF02803 Thiolase, C-terminal domain DKC18_017030 PF00108 Thiolase, N-terminal domain DKC18_017045 PF00376 MerR family regulatory protein DKC18_017045 PF09278 MerR, DNA binding DKC18_017070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKC18_017070 PF00183 Hsp90 protein DKC18_017090 PF00561 alpha/beta hydrolase fold DKC18_017110 PF04997 RNA polymerase Rpb1, domain 1 DKC18_017110 PF00623 RNA polymerase Rpb1, domain 2 DKC18_017110 PF04983 RNA polymerase Rpb1, domain 3 DKC18_017110 PF05000 RNA polymerase Rpb1, domain 4 DKC18_017110 PF04998 RNA polymerase Rpb1, domain 5 DKC18_017115 PF04561 RNA polymerase Rpb2, domain 2 DKC18_017115 PF04560 RNA polymerase Rpb2, domain 7 DKC18_017115 PF00562 RNA polymerase Rpb2, domain 6 DKC18_017115 PF10385 RNA polymerase beta subunit external 1 domain DKC18_017115 PF04565 RNA polymerase Rpb2, domain 3 DKC18_017115 PF04563 RNA polymerase beta subunit DKC18_017125 PF00466 Ribosomal protein L10 DKC18_017130 PF00687 Ribosomal protein L1p/L10e family DKC18_017135 PF00298 Ribosomal protein L11, RNA binding domain DKC18_017135 PF03946 Ribosomal protein L11, N-terminal domain DKC18_017140 PF02357 Transcription termination factor nusG DKC18_017140 PF00467 KOW motif DKC18_017145 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DKC18_017155 PF03143 Elongation factor Tu C-terminal domain DKC18_017155 PF03144 Elongation factor Tu domain 2 DKC18_017155 PF00009 Elongation factor Tu GTP binding domain DKC18_017180 PF04715 Anthranilate synthase component I, N terminal region DKC18_017180 PF00425 chorismate binding enzyme DKC18_017185 PF13419 Haloacid dehalogenase-like hydrolase DKC18_017190 PF00498 FHA domain DKC18_017190 PF12401 Protein of unknown function (DUF2662) DKC18_017195 PF03958 Bacterial type II/III secretion system short domain DKC18_017195 PF00263 Bacterial type II and III secretion system protein DKC18_017210 PF00816 H-NS histone family DKC18_017235 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DKC18_017235 PF03900 Porphobilinogen deaminase, C-terminal domain DKC18_017260 PF01895 PhoU domain DKC18_017290 PF00293 NUDIX domain DKC18_017300 PF01258 Prokaryotic dksA/traR C4-type zinc finger DKC18_017310 PF01098 Cell cycle protein DKC18_017315 PF02875 Mur ligase family, glutamate ligase domain DKC18_017315 PF08245 Mur ligase middle domain DKC18_017345 PF01842 ACT domain DKC18_017345 PF03447 Homoserine dehydrogenase, NAD binding domain DKC18_017345 PF00742 Homoserine dehydrogenase DKC18_017350 PF00291 Pyridoxal-phosphate dependent enzyme DKC18_017355 PF00768 D-alanyl-D-alanine carboxypeptidase DKC18_017360 PF00072 Response regulator receiver domain DKC18_017360 PF00196 Bacterial regulatory proteins, luxR family DKC18_017380 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DKC18_017380 PF01676 Metalloenzyme superfamily DKC18_017385 PF03739 Lipopolysaccharide export system permease LptF/LptG DKC18_017430 PF03477 ATP cone domain DKC18_017435 PF00909 Ammonium Transporter Family DKC18_017440 PF00543 Nitrogen regulatory protein P-II DKC18_017465 PF00905 Penicillin binding protein transpeptidase domain DKC18_017490 PF01740 STAS domain DKC18_017490 PF00916 Sulfate permease family DKC18_017495 PF00582 Universal stress protein family DKC18_017525 PF00665 Integrase core domain DKC18_017535 PF01078 Magnesium chelatase, subunit ChlI DKC18_017535 PF13335 Magnesium chelatase, subunit ChlI C-terminal DKC18_017545 PF00596 Class II Aldolase and Adducin N-terminal domain DKC18_017565 PF00719 Inorganic pyrophosphatase DKC18_017585 PF03989 DNA gyrase C-terminal domain, beta-propeller DKC18_017585 PF00521 DNA gyrase/topoisomerase IV, subunit A DKC18_017595 PF03458 UPF0126 domain DKC18_017600 PF02810 SEC-C motif DKC18_017605 PF03741 Integral membrane protein TerC family DKC18_017605 PF03471 Transporter associated domain DKC18_017610 PF03641 Possible lysine decarboxylase DKC18_017660 PF03358 NADPH-dependent FMN reductase DKC18_017710 PF00440 Bacterial regulatory proteins, tetR family DKC18_017735 PF01327 Polypeptide deformylase DKC18_017760 PF01300 Telomere recombination DKC18_017785 PF00255 Glutathione peroxidase DKC18_017800 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKC18_017800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKC18_017805 PF00231 ATP synthase DKC18_017810 PF00306 ATP synthase alpha/beta chain, C terminal domain DKC18_017810 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKC18_017810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKC18_017825 PF00137 ATP synthase subunit C DKC18_017830 PF00119 ATP synthase A chain DKC18_017855 PF00950 ABC 3 transport family DKC18_017865 PF04261 Dyp-type peroxidase family DKC18_017875 PF03949 Malic enzyme, NAD binding domain DKC18_017875 PF00390 Malic enzyme, N-terminal domain DKC18_017900 PF02678 Pirin DKC18_017900 PF05726 Pirin C-terminal cupin domain DKC18_017910 PF01475 Ferric uptake regulator family DKC18_017920 PF13302 Acetyltransferase (GNAT) domain DKC18_017930 PF04286 Protein of unknown function (DUF445) DKC18_018035 PF02321 Outer membrane efflux protein DKC18_018045 PF13657 HipA N-terminal domain DKC18_018045 PF07804 HipA-like C-terminal domain DKC18_018050 PF00271 Helicase conserved C-terminal domain DKC18_018050 PF12419 SNF2 Helicase protein DKC18_018050 PF00176 SNF2 family N-terminal domain DKC18_018065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKC18_018065 PF02378 Phosphotransferase system, EIIC DKC18_018075 PF00391 PEP-utilising enzyme, mobile domain DKC18_018075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKC18_018075 PF00381 PTS HPr component phosphorylation site DKC18_018075 PF05524 PEP-utilising enzyme, N-terminal DKC18_018075 PF02896 PEP-utilising enzyme, TIM barrel domain DKC18_018080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKC18_018080 PF00381 PTS HPr component phosphorylation site DKC18_018125 PF00765 Autoinducer synthase DKC18_018135 PF00378 Enoyl-CoA hydratase/isomerase DKC18_018150 PF13193 AMP-binding enzyme C-terminal domain DKC18_018150 PF00501 AMP-binding enzyme DKC18_018160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKC18_018160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKC18_018165 PF00171 Aldehyde dehydrogenase family DKC18_018175 PF00324 Amino acid permease DKC18_018180 PF00324 Amino acid permease DKC18_018185 PF01042 Endoribonuclease L-PSP DKC18_018190 PF01168 Alanine racemase, N-terminal domain DKC18_018190 PF00842 Alanine racemase, C-terminal domain DKC18_018195 PF01266 FAD dependent oxidoreductase DKC18_018200 PF01037 Lrp/AsnC ligand binding domain DKC18_018225 PF00849 RNA pseudouridylate synthase DKC18_018290 PF01070 FMN-dependent dehydrogenase DKC18_018295 PF07729 FCD domain DKC18_018295 PF00392 Bacterial regulatory proteins, gntR family DKC18_018300 PF02652 L-lactate permease DKC18_018315 PF16363 GDP-mannose 4,6 dehydratase DKC18_018325 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DKC18_018325 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DKC18_018325 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DKC18_018330 PF00483 Nucleotidyl transferase DKC18_018335 PF02397 Bacterial sugar transferase DKC18_018370 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DKC18_018375 PF01575 MaoC like domain DKC18_018385 PF05523 WxcM-like, C-terminal DKC18_018390 PF00483 Nucleotidyl transferase DKC18_018395 PF16363 GDP-mannose 4,6 dehydratase DKC18_018410 PF01451 Low molecular weight phosphotyrosine protein phosphatase DKC18_018425 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DKC18_018425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKC18_018430 PF03023 Lipid II flippase MurJ DKC18_018435 PF01510 N-acetylmuramoyl-L-alanine amidase DKC18_018450 PF05506 Domain of unknown function (DUF756) DKC18_018450 PF04185 Phosphoesterase family DKC18_018460 PF00487 Fatty acid desaturase DKC18_018470 PF00440 Bacterial regulatory proteins, tetR family DKC18_018480 PF01323 DSBA-like thioredoxin domain DKC18_018490 PF13419 Haloacid dehalogenase-like hydrolase DKC18_018495 PF00106 short chain dehydrogenase DKC18_018525 PF00296 Luciferase-like monooxygenase DKC18_018530 PF00528 Binding-protein-dependent transport system inner membrane component DKC18_018535 PF00005 ABC transporter DKC18_018545 PF01048 Phosphorylase superfamily DKC18_018555 PF06574 FAD synthetase DKC18_018555 PF01687 Riboflavin kinase DKC18_018570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKC18_018615 PF07859 alpha/beta hydrolase fold DKC18_018640 PF01025 GrpE DKC18_018680 PF00731 AIR carboxylase DKC18_018690 PF08245 Mur ligase middle domain DKC18_018690 PF01225 Mur ligase family, catalytic domain DKC18_018690 PF02875 Mur ligase family, glutamate ligase domain DKC18_018700 PF01569 PAP2 superfamily DKC18_018715 PF03738 Glutathionylspermidine synthase preATP-grasp DKC18_018730 PF00156 Phosphoribosyl transferase domain DKC18_018740 PF10411 Disulfide bond isomerase protein N-terminus DKC18_018740 PF13098 Thioredoxin-like domain DKC18_018745 PF01545 Cation efflux family DKC18_018765 PF01809 Putative membrane protein insertion efficiency factor DKC18_018775 PF00468 Ribosomal protein L34 DKC18_019005 PF04151 Bacterial pre-peptidase C-terminal domain DKC18_019100 PF00550 Phosphopantetheine attachment site DKC18_019100 PF16197 Ketoacyl-synthetase C-terminal extension DKC18_019100 PF14765 Polyketide synthase dehydratase DKC18_019100 PF00698 Acyl transferase domain DKC18_019100 PF08240 Alcohol dehydrogenase GroES-like domain DKC18_019100 PF02801 Beta-ketoacyl synthase, C-terminal domain DKC18_019100 PF00109 Beta-ketoacyl synthase, N-terminal domain DKC18_019100 PF08659 KR domain DKC18_019115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKC18_019115 PF03466 LysR substrate binding domain DKC18_019175 PF05973 Phage derived protein Gp49-like (DUF891)