locus-tag class description DKE47_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain DKE47_000010 PF02767 DNA polymerase III beta subunit, central domain DKE47_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain DKE47_000030 PF09335 SNARE associated Golgi protein DKE47_000055 PF01521 Iron-sulphur cluster biosynthesis DKE47_000060 PF00561 alpha/beta hydrolase fold DKE47_000070 PF00579 tRNA synthetases class I (W and Y) DKE47_000110 PF00209 Sodium:neurotransmitter symporter family DKE47_000120 PF01189 16S rRNA methyltransferase RsmB/F DKE47_000120 PF01029 NusB family DKE47_000125 PF02911 Formyl transferase, C-terminal domain DKE47_000125 PF00551 Formyl transferase DKE47_000130 PF00920 Dehydratase family DKE47_000150 PF00860 Permease family DKE47_000180 PF00684 DnaJ central domain DKE47_000180 PF01556 DnaJ C terminal domain DKE47_000180 PF00226 DnaJ domain DKE47_000205 PF00248 Aldo/keto reductase family DKE47_000210 PF03466 LysR substrate binding domain DKE47_000210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_000230 PF08240 Alcohol dehydrogenase GroES-like domain DKE47_000230 PF00107 Zinc-binding dehydrogenase DKE47_000235 PF03352 Methyladenine glycosylase DKE47_000250 PF14815 NUDIX domain DKE47_000250 PF00730 HhH-GPD superfamily base excision DNA repair protein DKE47_000250 PF00633 Helix-hairpin-helix motif DKE47_000250 PF10576 Iron-sulfur binding domain of endonuclease III DKE47_000265 PF07043 Protein of unknown function (DUF1328) DKE47_000270 PF03692 Putative zinc- or iron-chelating domain DKE47_000275 PF07995 Glucose / Sorbosone dehydrogenase DKE47_000305 PF00701 Dihydrodipicolinate synthetase family DKE47_000315 PF01758 Sodium Bile acid symporter family DKE47_000330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE47_000355 PF00324 Amino acid permease DKE47_000365 PF02492 CobW/HypB/UreG, nucleotide-binding domain DKE47_000365 PF07683 Cobalamin synthesis protein cobW C-terminal domain DKE47_000375 PF07702 UTRA domain DKE47_000375 PF00392 Bacterial regulatory proteins, gntR family DKE47_000380 PF05962 HutD DKE47_000385 PF17391 Urocanase N-terminal domain DKE47_000385 PF17392 Urocanase C-terminal domain DKE47_000385 PF01175 Urocanase Rossmann-like domain DKE47_000400 PF01979 Amidohydrolase family DKE47_000405 PF01979 Amidohydrolase family DKE47_000420 PF01177 Asp/Glu/Hydantoin racemase DKE47_000430 PF01380 SIS domain DKE47_000440 PF04608 Phosphatidylglycerophosphatase A DKE47_000445 PF02769 AIR synthase related protein, C-terminal domain DKE47_000445 PF00586 AIR synthase related protein, N-terminal domain DKE47_000490 PF02580 D-Tyr-tRNA(Tyr) deacylase DKE47_000495 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DKE47_000495 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DKE47_000505 PF02666 Phosphatidylserine decarboxylase DKE47_000525 PF00486 Transcriptional regulatory protein, C terminal DKE47_000525 PF00072 Response regulator receiver domain DKE47_000535 PF00106 short chain dehydrogenase DKE47_000545 PF00155 Aminotransferase class I and II DKE47_000550 PF04286 Protein of unknown function (DUF445) DKE47_000565 PF04262 Glutamate-cysteine ligase DKE47_000570 PF02600 Disulfide bond formation protein DsbB DKE47_000590 PF01476 LysM domain DKE47_000590 PF04650 YSIRK type signal peptide DKE47_000590 PF02216 B domain DKE47_000590 PF00746 LPXTG cell wall anchor motif DKE47_000590 PF03373 Octapeptide repeat DKE47_000640 PF03561 Allantoicase repeat DKE47_000650 PF01494 FAD binding domain DKE47_000660 PF00860 Permease family DKE47_000665 PF00576 HIUase/Transthyretin family DKE47_000695 PF11412 Disulphide bond corrector protein DsbC DKE47_000695 PF02683 Cytochrome C biogenesis protein transmembrane region DKE47_000720 PF03372 Endonuclease/Exonuclease/phosphatase family DKE47_000750 PF04101 Glycosyltransferase family 28 C-terminal domain DKE47_000750 PF03033 Glycosyltransferase family 28 N-terminal domain DKE47_000765 PF03799 Cell division protein FtsQ DKE47_000765 PF08478 POTRA domain, FtsQ-type DKE47_000770 PF02491 SHS2 domain inserted in FTSA DKE47_000810 PF01169 Uncharacterized protein family UPF0016 DKE47_000820 PF03692 Putative zinc- or iron-chelating domain DKE47_000830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKE47_000830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKE47_000830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKE47_000830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKE47_000860 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE47_000895 PF01037 Lrp/AsnC ligand binding domain DKE47_000900 PF00296 Luciferase-like monooxygenase DKE47_000905 PF03358 NADPH-dependent FMN reductase DKE47_000910 PF00196 Bacterial regulatory proteins, luxR family DKE47_000910 PF00072 Response regulator receiver domain DKE47_000925 PF04341 Protein of unknown function, DUF485 DKE47_000930 PF00474 Sodium:solute symporter family DKE47_000970 PF16925 Tetracyclin repressor-like, C-terminal domain DKE47_000970 PF00440 Bacterial regulatory proteins, tetR family DKE47_000975 PF08240 Alcohol dehydrogenase GroES-like domain DKE47_000975 PF08659 KR domain DKE47_000975 PF14765 Polyketide synthase dehydratase DKE47_000975 PF00107 Zinc-binding dehydrogenase DKE47_000975 PF00698 Acyl transferase domain DKE47_000975 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE47_000975 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE47_000975 PF16197 Ketoacyl-synthetase C-terminal extension DKE47_000975 PF00550 Phosphopantetheine attachment site DKE47_000990 PF02581 Thiamine monophosphate synthase DKE47_000990 PF03070 TENA/THI-4/PQQC family DKE47_000990 PF08543 Phosphomethylpyrimidine kinase DKE47_001000 PF07690 Major Facilitator Superfamily DKE47_001005 PF00436 Single-strand binding protein family DKE47_001075 PF00171 Aldehyde dehydrogenase family DKE47_001085 PF00857 Isochorismatase family DKE47_001090 PF05726 Pirin C-terminal cupin domain DKE47_001090 PF02678 Pirin DKE47_001095 PF01593 Flavin containing amine oxidoreductase DKE47_001120 PF07690 Major Facilitator Superfamily DKE47_001125 PF03466 LysR substrate binding domain DKE47_001125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_001165 PF13936 Helix-turn-helix domain DKE47_001165 PF00665 Integrase core domain DKE47_001215 PF02705 K+ potassium transporter DKE47_001250 PF00230 Major intrinsic protein DKE47_001265 PF00977 Histidine biosynthesis protein DKE47_001300 PF00977 Histidine biosynthesis protein DKE47_001315 PF00117 Glutamine amidotransferase class-I DKE47_001340 PF00583 Acetyltransferase (GNAT) family DKE47_001355 PF00512 His Kinase A (phospho-acceptor) domain DKE47_001355 PF00672 HAMP domain DKE47_001355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE47_001360 PF00486 Transcriptional regulatory protein, C terminal DKE47_001360 PF00072 Response regulator receiver domain DKE47_001380 PF00106 short chain dehydrogenase DKE47_001385 PF01053 Cys/Met metabolism PLP-dependent enzyme DKE47_001390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DKE47_001390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DKE47_001390 PF00205 Thiamine pyrophosphate enzyme, central domain DKE47_001430 PF01545 Cation efflux family DKE47_001460 PF00324 Amino acid permease DKE47_001475 PF00749 tRNA synthetases class I (E and Q), catalytic domain DKE47_001490 PF01795 MraW methylase family DKE47_001510 PF08245 Mur ligase middle domain DKE47_001510 PF02875 Mur ligase family, glutamate ligase domain DKE47_001510 PF01225 Mur ligase family, catalytic domain DKE47_001560 PF01202 Shikimate kinase DKE47_001565 PF01761 3-dehydroquinate synthase DKE47_001590 PF04011 LemA family DKE47_001595 PF04536 TPM domain DKE47_001605 PF00114 Pilin (bacterial filament) DKE47_001605 PF07963 Prokaryotic N-terminal methylation motif DKE47_001630 PF00210 Ferritin-like domain DKE47_001635 PF04324 BFD-like [2Fe-2S] binding domain DKE47_001640 PF01042 Endoribonuclease L-PSP DKE47_001655 PF01192 RNA polymerase Rpb6 DKE47_001660 PF00625 Guanylate kinase DKE47_001705 PF00886 Ribosomal protein S16 DKE47_001710 PF05239 PRC-barrel domain DKE47_001710 PF01782 RimM N-terminal domain DKE47_001715 PF01746 tRNA (Guanine-1)-methyltransferase DKE47_001720 PF01245 Ribosomal protein L19 DKE47_001725 PF00561 alpha/beta hydrolase fold DKE47_001730 PF03280 Proteobacterial lipase chaperone protein DKE47_001740 PF01925 Sulfite exporter TauE/SafE DKE47_001750 PF00892 EamA-like transporter family DKE47_001780 PF03992 Antibiotic biosynthesis monooxygenase DKE47_001785 PF02525 Flavodoxin-like fold DKE47_001815 PF01594 AI-2E family transporter DKE47_001880 PF04996 Succinylarginine dihydrolase DKE47_001935 PF05746 DALR anticodon binding domain DKE47_001935 PF02092 Glycyl-tRNA synthetase beta subunit DKE47_001940 PF02091 Glycyl-tRNA synthetase alpha subunit DKE47_001965 PF00571 CBS domain DKE47_001970 PF04024 PspC domain DKE47_002000 PF00925 GTP cyclohydrolase II DKE47_002010 PF00459 Inositol monophosphatase family DKE47_002020 PF00005 ABC transporter DKE47_002025 PF02405 Permease MlaE DKE47_002035 PF05494 MlaC protein DKE47_002050 PF03641 Possible lysine decarboxylase DKE47_002055 PF00293 NUDIX domain DKE47_002060 PF00156 Phosphoribosyl transferase domain DKE47_002080 PF01553 Acyltransferase DKE47_002105 PF02082 Transcriptional regulator DKE47_002110 PF00042 Globin DKE47_002110 PF00175 Oxidoreductase NAD-binding domain DKE47_002110 PF00970 Oxidoreductase FAD-binding domain DKE47_002130 PF00338 Ribosomal protein S10p/S20e DKE47_002135 PF00297 Ribosomal protein L3 DKE47_002140 PF00573 Ribosomal protein L4/L1 family DKE47_002145 PF00276 Ribosomal protein L23 DKE47_002150 PF00181 Ribosomal Proteins L2, RNA binding domain DKE47_002150 PF03947 Ribosomal Proteins L2, C-terminal domain DKE47_002155 PF00203 Ribosomal protein S19 DKE47_002160 PF00237 Ribosomal protein L22p/L17e DKE47_002170 PF00252 Ribosomal protein L16p/L10e DKE47_002175 PF00831 Ribosomal L29 protein DKE47_002180 PF00366 Ribosomal protein S17 DKE47_002200 PF00253 Ribosomal protein S14p/S29e DKE47_002210 PF00347 Ribosomal protein L6 DKE47_002215 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DKE47_002220 PF03719 Ribosomal protein S5, C-terminal domain DKE47_002220 PF00333 Ribosomal protein S5, N-terminal domain DKE47_002225 PF00327 Ribosomal protein L30p/L7e DKE47_002230 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DKE47_002235 PF00344 SecY translocase DKE47_002240 PF00444 Ribosomal protein L36 DKE47_002245 PF00416 Ribosomal protein S13/S18 DKE47_002250 PF00411 Ribosomal protein S11 DKE47_002265 PF01196 Ribosomal protein L17 DKE47_002270 PF00743 Flavin-binding monooxygenase-like DKE47_002275 PF02770 Acyl-CoA dehydrogenase, middle domain DKE47_002275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE47_002275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE47_002280 PF03937 Flavinator of succinate dehydrogenase DKE47_002310 PF09526 Probable metal-binding protein (DUF2387) DKE47_002320 PF08461 Ribonuclease R winged-helix domain DKE47_002320 PF17876 Cold shock domain DKE47_002320 PF08206 Ribonuclease B OB domain DKE47_002320 PF00773 RNB domain DKE47_002320 PF00575 S1 RNA binding domain DKE47_002365 PF01557 Fumarylacetoacetate (FAA) hydrolase family DKE47_002370 PF12833 Helix-turn-helix domain DKE47_002380 PF03631 Virulence factor BrkB DKE47_002385 PF03358 NADPH-dependent FMN reductase DKE47_002410 PF02130 Uncharacterized protein family UPF0054 DKE47_002415 PF02562 PhoH-like protein DKE47_002435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DKE47_002435 PF00056 lactate/malate dehydrogenase, NAD binding domain DKE47_002455 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DKE47_002460 PF01066 CDP-alcohol phosphatidyltransferase DKE47_002575 PF04386 Stringent starvation protein B DKE47_002580 PF00043 Glutathione S-transferase, C-terminal domain DKE47_002580 PF13417 Glutathione S-transferase, N-terminal domain DKE47_002585 PF00380 Ribosomal protein S9/S16 DKE47_002590 PF00572 Ribosomal protein L13 DKE47_002600 PF00398 Ribosomal RNA adenine dimethylase DKE47_002605 PF00398 Ribosomal RNA adenine dimethylase DKE47_002640 PF13091 PLD-like domain DKE47_002650 PF00691 OmpA family DKE47_002650 PF01389 OmpA-like transmembrane domain DKE47_002700 PF00753 Metallo-beta-lactamase superfamily DKE47_002700 PF04273 Putative phosphatase (DUF442) DKE47_002715 PF03061 Thioesterase superfamily DKE47_002750 PF03795 YCII-related domain DKE47_002755 PF04279 Intracellular septation protein A DKE47_002765 PF01062 Bestrophin, RFP-TM, chloride channel DKE47_002780 PF07549 SecD/SecF GG Motif DKE47_002780 PF02355 Protein export membrane protein DKE47_002790 PF02699 Preprotein translocase subunit DKE47_002810 PF02547 Queuosine biosynthesis protein DKE47_002865 PF10549 ORF11CD3 domain DKE47_002865 PF09669 Phage regulatory protein Rha (Phage_pRha) DKE47_002900 PF00717 Peptidase S24-like DKE47_002905 PF11799 impB/mucB/samB family C-terminal domain DKE47_002905 PF00817 impB/mucB/samB family DKE47_002905 PF13438 Domain of unknown function (DUF4113) DKE47_002905 PF11798 IMS family HHH motif DKE47_002995 PF01471 Putative peptidoglycan binding domain DKE47_002995 PF01510 N-acetylmuramoyl-L-alanine amidase DKE47_003070 PF00072 Response regulator receiver domain DKE47_003070 PF00512 His Kinase A (phospho-acceptor) domain DKE47_003070 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE47_003070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE47_003080 PF01063 Amino-transferase class IV DKE47_003090 PF00884 Sulfatase DKE47_003135 PF11380 Stealth protein CR2, conserved region 2 DKE47_003135 PF17103 Stealth protein CR4, conserved region 4 DKE47_003135 PF17101 Stealth protein CR1, conserved region 1 DKE47_003160 PF00593 TonB dependent receptor DKE47_003160 PF07715 TonB-dependent Receptor Plug Domain DKE47_003180 PF06146 Phosphate-starvation-inducible E DKE47_003185 PF12806 Acetyl-CoA dehydrogenase C-terminal like DKE47_003185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE47_003185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE47_003185 PF02770 Acyl-CoA dehydrogenase, middle domain DKE47_003205 PF00486 Transcriptional regulatory protein, C terminal DKE47_003205 PF00072 Response regulator receiver domain DKE47_003210 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DKE47_003285 PF02875 Mur ligase family, glutamate ligase domain DKE47_003285 PF08245 Mur ligase middle domain DKE47_003320 PF07690 Major Facilitator Superfamily DKE47_003320 PF00083 Sugar (and other) transporter DKE47_003335 PF13673 Acetyltransferase (GNAT) domain DKE47_003360 PF02311 AraC-like ligand binding domain DKE47_003360 PF12833 Helix-turn-helix domain DKE47_003370 PF04966 Carbohydrate-selective porin, OprB family DKE47_003375 PF01011 PQQ enzyme repeat DKE47_003390 PF00893 Small Multidrug Resistance protein DKE47_003410 PF00691 OmpA family DKE47_003410 PF13505 Outer membrane protein beta-barrel domain DKE47_003420 PF01139 tRNA-splicing ligase RtcB DKE47_003425 PF00324 Amino acid permease DKE47_003445 PF01741 Large-conductance mechanosensitive channel, MscL DKE47_003460 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DKE47_003460 PF06827 Zinc finger found in FPG and IleRS DKE47_003460 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DKE47_003465 PF02245 Methylpurine-DNA glycosylase (MPG) DKE47_003470 PF00593 TonB dependent receptor DKE47_003470 PF07715 TonB-dependent Receptor Plug Domain DKE47_003480 PF03547 Membrane transport protein DKE47_003510 PF04343 Protein of unknown function, DUF488 DKE47_003515 PF08274 PhnA Zinc-Ribbon DKE47_003515 PF03831 PhnA domain DKE47_003545 PF00072 Response regulator receiver domain DKE47_003550 PF00072 Response regulator receiver domain DKE47_003560 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DKE47_003560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE47_003590 PF04304 Protein of unknown function (DUF454) DKE47_003595 PF17969 L,D-transpeptidase C-terminal domain DKE47_003595 PF03734 L,D-transpeptidase catalytic domain DKE47_003660 PF00881 Nitroreductase family DKE47_003675 PF01235 Sodium:alanine symporter family DKE47_003685 PF13291 ACT domain DKE47_003685 PF00291 Pyridoxal-phosphate dependent enzyme DKE47_003720 PF02934 GatB/GatE catalytic domain DKE47_003720 PF02637 GatB domain DKE47_003725 PF01425 Amidase DKE47_003730 PF02686 Glu-tRNAGln amidotransferase C subunit DKE47_003740 PF04085 rod shape-determining protein MreC DKE47_003745 PF04093 rod shape-determining protein MreD DKE47_003750 PF02545 Maf-like protein DKE47_003755 PF00575 S1 RNA binding domain DKE47_003755 PF10150 Ribonuclease E/G family DKE47_003770 PF01507 Phosphoadenosine phosphosulfate reductase family DKE47_003785 PF02525 Flavodoxin-like fold DKE47_003810 PF06719 AraC-type transcriptional regulator N-terminus DKE47_003810 PF12833 Helix-turn-helix domain DKE47_003860 PF00348 Polyprenyl synthetase DKE47_003865 PF04237 YjbR DKE47_003870 PF01145 SPFH domain / Band 7 family DKE47_003910 PF00072 Response regulator receiver domain DKE47_003910 PF00486 Transcriptional regulatory protein, C terminal DKE47_003915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE47_003915 PF00512 His Kinase A (phospho-acceptor) domain DKE47_003915 PF08521 Two-component sensor kinase N-terminal DKE47_003955 PF08264 Anticodon-binding domain of tRNA DKE47_003955 PF10458 Valyl tRNA synthetase tRNA binding arm DKE47_003955 PF00133 tRNA synthetases class I (I, L, M and V) DKE47_003985 PF01906 Putative heavy-metal-binding DKE47_004005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE47_004005 PF00529 HlyD membrane-fusion protein of T1SS DKE47_004030 PF00829 Ribosomal prokaryotic L21 protein DKE47_004040 PF03548 Outer membrane lipoprotein carrier protein LolA DKE47_004060 PF00588 SpoU rRNA Methylase family DKE47_004080 PF00465 Iron-containing alcohol dehydrogenase DKE47_004095 PF04359 Protein of unknown function (DUF493) DKE47_004130 PF00285 Citrate synthase, C-terminal domain DKE47_004135 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKE47_004140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKE47_004145 PF02910 Fumarate reductase flavoprotein C-term DKE47_004145 PF00890 FAD binding domain DKE47_004150 PF13085 2Fe-2S iron-sulfur cluster binding domain DKE47_004170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKE47_004170 PF00364 Biotin-requiring enzyme DKE47_004170 PF02817 e3 binding domain DKE47_004180 PF08442 ATP-grasp domain DKE47_004180 PF00549 CoA-ligase DKE47_004190 PF00579 tRNA synthetases class I (W and Y) DKE47_004200 PF04228 Putative neutral zinc metallopeptidase DKE47_004230 PF00582 Universal stress protein family DKE47_004235 PF00132 Bacterial transferase hexapeptide (six repeats) DKE47_004240 PF01272 Transcription elongation factor, GreA/GreB, C-term DKE47_004240 PF03449 Transcription elongation factor, N-terminal DKE47_004250 PF00117 Glutamine amidotransferase class-I DKE47_004250 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DKE47_004275 PF00004 ATPase family associated with various cellular activities (AAA) DKE47_004275 PF17862 AAA+ lid domain DKE47_004275 PF06480 FtsH Extracellular DKE47_004275 PF01434 Peptidase family M41 DKE47_004315 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DKE47_004315 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DKE47_004340 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DKE47_004340 PF01266 FAD dependent oxidoreductase DKE47_004350 PF00781 Diacylglycerol kinase catalytic domain DKE47_004355 PF00149 Calcineurin-like phosphoesterase DKE47_004360 PF00166 Chaperonin 10 Kd subunit DKE47_004370 PF01219 Prokaryotic diacylglycerol kinase DKE47_004375 PF00753 Metallo-beta-lactamase superfamily DKE47_004380 PF03009 Glycerophosphoryl diester phosphodiesterase family DKE47_004395 PF01435 Peptidase family M48 DKE47_004400 PF01464 Transglycosylase SLT domain DKE47_004410 PF01171 PP-loop family DKE47_004430 PF03449 Transcription elongation factor, N-terminal DKE47_004430 PF01272 Transcription elongation factor, GreA/GreB, C-term DKE47_004510 PF00378 Enoyl-CoA hydratase/isomerase DKE47_004520 PF00108 Thiolase, N-terminal domain DKE47_004520 PF02803 Thiolase, C-terminal domain DKE47_004525 PF02515 CoA-transferase family III DKE47_004530 PF09339 IclR helix-turn-helix domain DKE47_004595 PF09857 Putative toxin of bacterial toxin-antitoxin pair DKE47_004680 PF00364 Biotin-requiring enzyme DKE47_004680 PF00561 alpha/beta hydrolase fold DKE47_004695 PF03466 LysR substrate binding domain DKE47_004695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_004705 PF00171 Aldehyde dehydrogenase family DKE47_004725 PF00529 HlyD membrane-fusion protein of T1SS DKE47_004725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE47_004730 PF00873 AcrB/AcrD/AcrF family DKE47_004735 PF00881 Nitroreductase family DKE47_004760 PF02634 FdhD/NarQ family DKE47_004765 PF06803 Protein of unknown function (DUF1232) DKE47_004770 PF11890 Domain of unknown function (DUF3410) DKE47_004770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKE47_004770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKE47_004775 PF00152 tRNA synthetases class II (D, K and N) DKE47_004810 PF01678 Diaminopimelate epimerase DKE47_004820 PF01810 LysE type translocator DKE47_004825 PF00589 Phage integrase family DKE47_004825 PF02899 Phage integrase, N-terminal SAM-like domain DKE47_004830 PF01012 Electron transfer flavoprotein domain DKE47_004835 PF01012 Electron transfer flavoprotein domain DKE47_004835 PF00766 Electron transfer flavoprotein FAD-binding domain DKE47_004915 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DKE47_004925 PF12704 MacB-like periplasmic core domain DKE47_004925 PF02687 FtsX-like permease family DKE47_004930 PF00005 ABC transporter DKE47_004945 PF01343 Peptidase family S49 DKE47_004945 PF06965 Na+/H+ antiporter 1 DKE47_004955 PF00551 Formyl transferase DKE47_004960 PF00586 AIR synthase related protein, N-terminal domain DKE47_004960 PF02769 AIR synthase related protein, C-terminal domain DKE47_004965 PF01594 AI-2E family transporter DKE47_004970 PF00308 Bacterial dnaA protein DKE47_004970 PF08299 Bacterial dnaA protein helix-turn-helix DKE47_004970 PF11638 DnaA N-terminal domain DKE47_005015 PF00691 OmpA family DKE47_005030 PF02472 Biopolymer transport protein ExbD/TolR DKE47_005040 PF03061 Thioesterase superfamily DKE47_005070 PF07690 Major Facilitator Superfamily DKE47_005085 PF01784 NIF3 (NGG1p interacting factor 3) DKE47_005090 PF00378 Enoyl-CoA hydratase/isomerase DKE47_005095 PF01467 Cytidylyltransferase-like DKE47_005095 PF00293 NUDIX domain DKE47_005110 PF00578 AhpC/TSA family DKE47_005125 PF06508 Queuosine biosynthesis protein QueC DKE47_005160 PF00528 Binding-protein-dependent transport system inner membrane component DKE47_005175 PF01063 Amino-transferase class IV DKE47_005195 PF02910 Fumarate reductase flavoprotein C-term DKE47_005195 PF00890 FAD binding domain DKE47_005225 PF00035 Double-stranded RNA binding motif DKE47_005225 PF14622 Ribonuclease-III-like DKE47_005240 PF02565 Recombination protein O C terminal DKE47_005240 PF11967 Recombination protein O N terminal DKE47_005245 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DKE47_005250 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DKE47_005255 PF00106 short chain dehydrogenase DKE47_005320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKE47_005320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKE47_005410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE47_005415 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE47_005420 PF00768 D-alanyl-D-alanine carboxypeptidase DKE47_005420 PF07943 Penicillin-binding protein 5, C-terminal domain DKE47_005430 PF03971 Monomeric isocitrate dehydrogenase DKE47_005435 PF00849 RNA pseudouridylate synthase DKE47_005475 PF02567 Phenazine biosynthesis-like protein DKE47_005505 PF02581 Thiamine monophosphate synthase DKE47_005510 PF00202 Aminotransferase class-III DKE47_005520 PF00849 RNA pseudouridylate synthase DKE47_005525 PF00271 Helicase conserved C-terminal domain DKE47_005525 PF18339 RapA N-terminal Tudor like domain 1 DKE47_005525 PF18337 RapA N-terminal Tudor like domain DKE47_005525 PF00176 SNF2 family N-terminal domain DKE47_005525 PF12137 RNA polymerase recycling family C-terminal DKE47_005575 PF00171 Aldehyde dehydrogenase family DKE47_005580 PF01037 Lrp/AsnC ligand binding domain DKE47_005595 PF12849 PBP superfamily domain DKE47_005630 PF09997 Predicted membrane protein (DUF2238) DKE47_005655 PF00132 Bacterial transferase hexapeptide (six repeats) DKE47_005660 PF00768 D-alanyl-D-alanine carboxypeptidase DKE47_005660 PF07943 Penicillin-binding protein 5, C-terminal domain DKE47_005920 PF00589 Phage integrase family DKE47_005920 PF14659 Phage integrase, N-terminal SAM-like domain DKE47_005920 PF13356 Arm DNA-binding domain DKE47_005935 PF03466 LysR substrate binding domain DKE47_005935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_005945 PF07690 Major Facilitator Superfamily DKE47_005950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE47_005960 PF01197 Ribosomal protein L31 DKE47_005975 PF04055 Radical SAM superfamily DKE47_005980 PF01132 Elongation factor P (EF-P) OB domain DKE47_005980 PF08207 Elongation factor P (EF-P) KOW-like domain DKE47_005980 PF09285 Elongation factor P, C-terminal DKE47_005990 PF04328 Selenoprotein, putative DKE47_006035 PF17954 Quercetinase C-terminal cupin domain DKE47_006035 PF02678 Pirin DKE47_006055 PF05675 Protein of unknown function (DUF817) DKE47_006085 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE47_006085 PF01799 [2Fe-2S] binding domain DKE47_006105 PF00218 Indole-3-glycerol phosphate synthase DKE47_006110 PF02885 Glycosyl transferase family, helical bundle domain DKE47_006110 PF00591 Glycosyl transferase family, a/b domain DKE47_006125 PF00117 Glutamine amidotransferase class-I DKE47_006445 PF00854 POT family DKE47_006455 PF04345 Chorismate lyase DKE47_006460 PF01040 UbiA prenyltransferase family DKE47_006495 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DKE47_006495 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DKE47_006525 PF04452 RNA methyltransferase DKE47_006530 PF02219 Methylenetetrahydrofolate reductase DKE47_006555 PF04055 Radical SAM superfamily DKE47_006560 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE47_006560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKE47_006580 PF00557 Metallopeptidase family M24 DKE47_006620 PF05036 Sporulation related domain DKE47_006620 PF03330 Lytic transglycolase DKE47_006625 PF13406 Transglycosylase SLT domain DKE47_006645 PF01061 ABC-2 type transporter DKE47_006650 PF00005 ABC transporter DKE47_006715 PF00464 Serine hydroxymethyltransferase DKE47_006720 PF02321 Outer membrane efflux protein DKE47_006745 PF00528 Binding-protein-dependent transport system inner membrane component DKE47_006760 PF00893 Small Multidrug Resistance protein DKE47_006765 PF12838 4Fe-4S dicluster domain DKE47_006780 PF02567 Phenazine biosynthesis-like protein DKE47_006790 PF18389 TrmO C-terminal domain DKE47_006790 PF01980 tRNA-methyltransferase O DKE47_006805 PF04076 Bacterial OB fold (BOF) protein DKE47_006840 PF01513 ATP-NAD kinase DKE47_006845 PF07023 Protein of unknown function (DUF1315) DKE47_006865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE47_006865 PF02770 Acyl-CoA dehydrogenase, middle domain DKE47_006865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE47_006880 PF01817 Chorismate mutase type II DKE47_006880 PF01842 ACT domain DKE47_006880 PF00800 Prephenate dehydratase DKE47_006885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DKE47_006905 PF07687 Peptidase dimerisation domain DKE47_006905 PF01546 Peptidase family M20/M25/M40 DKE47_006925 PF05690 Thiazole biosynthesis protein ThiG DKE47_006950 PF00313 'Cold-shock' DNA-binding domain DKE47_006965 PF00881 Nitroreductase family DKE47_006990 PF01180 Dihydroorotate dehydrogenase DKE47_007025 PF09424 Yqey-like protein DKE47_007030 PF01165 Ribosomal protein S21 DKE47_007080 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DKE47_007080 PF17287 POTRA domain DKE47_007080 PF08479 POTRA domain, ShlB-type DKE47_007110 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family DKE47_007205 PF13649 Methyltransferase domain DKE47_007320 PF12146 Serine aminopeptidase, S33 DKE47_007340 PF03466 LysR substrate binding domain DKE47_007340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_007395 PF02470 MlaD protein DKE47_007405 PF00576 HIUase/Transthyretin family DKE47_007415 PF00072 Response regulator receiver domain DKE47_007415 PF00486 Transcriptional regulatory protein, C terminal DKE47_007460 PF00512 His Kinase A (phospho-acceptor) domain DKE47_007460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE47_007460 PF08521 Two-component sensor kinase N-terminal DKE47_007485 PF00892 EamA-like transporter family DKE47_007490 PF07995 Glucose / Sorbosone dehydrogenase DKE47_007500 PF02798 Glutathione S-transferase, N-terminal domain DKE47_007500 PF00043 Glutathione S-transferase, C-terminal domain DKE47_007545 PF00528 Binding-protein-dependent transport system inner membrane component DKE47_007570 PF01808 AICARFT/IMPCHase bienzyme DKE47_007570 PF02142 MGS-like domain DKE47_007575 PF02954 Bacterial regulatory protein, Fis family DKE47_007595 PF13932 GidA associated domain DKE47_007595 PF01134 Glucose inhibited division protein A DKE47_007615 PF01841 Transglutaminase-like superfamily DKE47_007615 PF08379 Bacterial transglutaminase-like N-terminal region DKE47_007635 PF03948 Ribosomal protein L9, C-terminal domain DKE47_007635 PF01281 Ribosomal protein L9, N-terminal domain DKE47_007640 PF01084 Ribosomal protein S18 DKE47_007645 PF01250 Ribosomal protein S6 DKE47_007650 PF01040 UbiA prenyltransferase family DKE47_007655 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DKE47_007685 PF03618 Kinase/pyrophosphorylase DKE47_007700 PF00535 Glycosyl transferase family 2 DKE47_007705 PF13994 PgaD-like protein DKE47_007715 PF00296 Luciferase-like monooxygenase DKE47_007750 PF17827 PrmC N-terminal domain DKE47_007750 PF13847 Methyltransferase domain DKE47_007755 PF00528 Binding-protein-dependent transport system inner membrane component DKE47_007760 PF09084 NMT1/THI5 like DKE47_007785 PF01613 Flavin reductase like domain DKE47_007790 PF00899 ThiF family DKE47_007795 PF03109 ABC1 family DKE47_007820 PF02669 K+-transporting ATPase, c chain DKE47_007845 PF03232 Ubiquinone biosynthesis protein COQ7 DKE47_007885 PF00520 Ion transport protein DKE47_007885 PF00027 Cyclic nucleotide-binding domain DKE47_007890 PF07690 Major Facilitator Superfamily DKE47_007900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_007900 PF03466 LysR substrate binding domain DKE47_007905 PF04284 Protein of unknown function (DUF441) DKE47_007935 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DKE47_007950 PF17209 Hfq protein DKE47_007955 PF13936 Helix-turn-helix domain DKE47_007955 PF00665 Integrase core domain DKE47_007985 PF00749 tRNA synthetases class I (E and Q), catalytic domain DKE47_007985 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DKE47_007990 PF02540 NAD synthase DKE47_007990 PF00958 GMP synthase C terminal domain DKE47_007990 PF00117 Glutamine amidotransferase class-I DKE47_008005 PF13520 Amino acid permease DKE47_008025 PF00465 Iron-containing alcohol dehydrogenase DKE47_008040 PF02110 Hydroxyethylthiazole kinase family DKE47_008070 PF00577 Outer membrane usher protein DKE47_008070 PF13954 PapC N-terminal domain DKE47_008070 PF13953 PapC C-terminal domain DKE47_008100 PF01817 Chorismate mutase type II DKE47_008105 PF01037 Lrp/AsnC ligand binding domain DKE47_008125 PF03328 HpcH/HpaI aldolase/citrate lyase family DKE47_008150 PF00291 Pyridoxal-phosphate dependent enzyme DKE47_008155 PF00924 Mechanosensitive ion channel DKE47_008210 PF00582 Universal stress protein family DKE47_008230 PF02308 MgtC family DKE47_008240 PF01037 Lrp/AsnC ligand binding domain DKE47_008245 PF01810 LysE type translocator DKE47_008255 PF03466 LysR substrate binding domain DKE47_008255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_008265 PF00108 Thiolase, N-terminal domain DKE47_008265 PF02803 Thiolase, C-terminal domain DKE47_008315 PF03061 Thioesterase superfamily DKE47_008330 PF00857 Isochorismatase family DKE47_008350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DKE47_008350 PF01565 FAD binding domain DKE47_008445 PF00929 Exonuclease DKE47_008545 PF01555 DNA methylase DKE47_008630 PF07007 Lysozyme inhibitor LprI DKE47_008800 PF00712 DNA polymerase III beta subunit, N-terminal domain DKE47_008800 PF02768 DNA polymerase III beta subunit, C-terminal domain DKE47_008800 PF02767 DNA polymerase III beta subunit, central domain DKE47_008870 PF13340 Putative transposase of IS4/5 family (DUF4096) DKE47_008910 PF00364 Biotin-requiring enzyme DKE47_008935 PF00486 Transcriptional regulatory protein, C terminal DKE47_008935 PF00072 Response regulator receiver domain DKE47_008960 PF12804 MobA-like NTP transferase domain DKE47_008975 PF06463 Molybdenum Cofactor Synthesis C DKE47_008975 PF04055 Radical SAM superfamily DKE47_008985 PF02391 MoaE protein DKE47_008990 PF00994 Probable molybdopterin binding domain DKE47_008990 PF01967 MoaC family DKE47_009000 PF01638 HxlR-like helix-turn-helix DKE47_009030 PF02635 DsrE/DsrF-like family DKE47_009040 PF10415 Fumarase C C-terminus DKE47_009040 PF00206 Lyase DKE47_009075 PF02542 YgbB family DKE47_009095 PF00072 Response regulator receiver domain DKE47_009095 PF02954 Bacterial regulatory protein, Fis family DKE47_009095 PF00158 Sigma-54 interaction domain DKE47_009110 PF00696 Amino acid kinase family DKE47_009115 PF01765 Ribosome recycling factor DKE47_009130 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DKE47_009130 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DKE47_009130 PF13288 DXP reductoisomerase C-terminal domain DKE47_009155 PF07977 FabA-like domain DKE47_009160 PF00132 Bacterial transferase hexapeptide (six repeats) DKE47_009160 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DKE47_009175 PF02631 RecX family DKE47_009210 PF01037 Lrp/AsnC ligand binding domain DKE47_009220 PF00324 Amino acid permease DKE47_009240 PF02586 SOS response associated peptidase (SRAP) DKE47_009280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKE47_009280 PF02378 Phosphotransferase system, EIIC DKE47_009285 PF00294 pfkB family carbohydrate kinase DKE47_009320 PF00557 Metallopeptidase family M24 DKE47_009335 PF00462 Glutaredoxin DKE47_009340 PF00202 Aminotransferase class-III DKE47_009345 PF00478 IMP dehydrogenase / GMP reductase domain DKE47_009345 PF00571 CBS domain DKE47_009375 PF02881 SRP54-type protein, helical bundle domain DKE47_009375 PF00448 SRP54-type protein, GTPase domain DKE47_009385 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) DKE47_009400 PF08173 Membrane bound YbgT-like protein DKE47_009405 PF02322 Cytochrome bd terminal oxidase subunit II DKE47_009430 PF00294 pfkB family carbohydrate kinase DKE47_009460 PF00291 Pyridoxal-phosphate dependent enzyme DKE47_009460 PF00585 C-terminal regulatory domain of Threonine dehydratase DKE47_009465 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DKE47_009490 PF02617 ATP-dependent Clp protease adaptor protein ClpS DKE47_009500 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DKE47_009545 PF00117 Glutamine amidotransferase class-I DKE47_009545 PF06418 CTP synthase N-terminus DKE47_009555 PF00113 Enolase, C-terminal TIM barrel domain DKE47_009555 PF03952 Enolase, N-terminal domain DKE47_009560 PF04239 Protein of unknown function (DUF421) DKE47_009570 PF04977 Septum formation initiator DKE47_009595 PF10397 Adenylosuccinate lyase C-terminus DKE47_009595 PF00206 Lyase DKE47_009605 PF07690 Major Facilitator Superfamily DKE47_009610 PF02627 Carboxymuconolactone decarboxylase family DKE47_009620 PF00775 Dioxygenase DKE47_009665 PF01614 Bacterial transcriptional regulator DKE47_009665 PF09339 IclR helix-turn-helix domain DKE47_009690 PF00106 short chain dehydrogenase DKE47_009760 PF02728 Copper amine oxidase, N3 domain DKE47_009760 PF02727 Copper amine oxidase, N2 domain DKE47_009760 PF07833 Copper amine oxidase N-terminal domain DKE47_009760 PF01179 Copper amine oxidase, enzyme domain DKE47_009770 PF00171 Aldehyde dehydrogenase family DKE47_009775 PF12146 Serine aminopeptidase, S33 DKE47_009780 PF00108 Thiolase, N-terminal domain DKE47_009780 PF02803 Thiolase, C-terminal domain DKE47_009805 PF01144 Coenzyme A transferase DKE47_009810 PF01144 Coenzyme A transferase DKE47_009815 PF04444 Catechol dioxygenase N terminus DKE47_009815 PF00775 Dioxygenase DKE47_009820 PF02426 Muconolactone delta-isomerase DKE47_009840 PF00392 Bacterial regulatory proteins, gntR family DKE47_009840 PF07729 FCD domain DKE47_009850 PF07690 Major Facilitator Superfamily DKE47_009875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE47_009875 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE47_009885 PF01872 RibD C-terminal domain DKE47_009895 PF13411 MerR HTH family regulatory protein DKE47_009985 PF04909 Amidohydrolase DKE47_010035 PF00171 Aldehyde dehydrogenase family DKE47_010060 PF07690 Major Facilitator Superfamily DKE47_010065 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKE47_010065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKE47_010120 PF14572 Phosphoribosyl synthetase-associated domain DKE47_010120 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKE47_010185 PF13291 ACT domain DKE47_010185 PF02824 TGS domain DKE47_010185 PF04607 Region found in RelA / SpoT proteins DKE47_010225 PF13673 Acetyltransferase (GNAT) domain DKE47_010270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE47_010270 PF16527 Two-component sensor protein CpxA, periplasmic domain DKE47_010270 PF00512 His Kinase A (phospho-acceptor) domain DKE47_010270 PF00672 HAMP domain DKE47_010280 PF00529 HlyD membrane-fusion protein of T1SS DKE47_010280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE47_010310 PF01266 FAD dependent oxidoreductase DKE47_010390 PF16970 Type-1 fimbrial protein, A DKE47_010395 PF02753 Pili assembly chaperone PapD, C-terminal domain DKE47_010395 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DKE47_010440 PF13091 PLD-like domain DKE47_010470 PF13186 Iron-sulfur cluster-binding domain DKE47_010470 PF04055 Radical SAM superfamily DKE47_010475 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DKE47_010520 PF00550 Phosphopantetheine attachment site DKE47_010520 PF00857 Isochorismatase family DKE47_010595 PF03459 TOBE domain DKE47_010595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_010605 PF00866 Ring hydroxylating beta subunit DKE47_010610 PF00175 Oxidoreductase NAD-binding domain DKE47_010610 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE47_010610 PF00970 Oxidoreductase FAD-binding domain DKE47_010615 PF12833 Helix-turn-helix domain DKE47_010615 PF14525 AraC-binding-like domain DKE47_010625 PF01613 Flavin reductase like domain DKE47_010665 PF00753 Metallo-beta-lactamase superfamily DKE47_010705 PF01144 Coenzyme A transferase DKE47_010720 PF00108 Thiolase, N-terminal domain DKE47_010720 PF02803 Thiolase, C-terminal domain DKE47_010725 PF03466 LysR substrate binding domain DKE47_010725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_010780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DKE47_010805 PF02525 Flavodoxin-like fold DKE47_010835 PF00753 Metallo-beta-lactamase superfamily DKE47_010835 PF04273 Putative phosphatase (DUF442) DKE47_010840 PF00753 Metallo-beta-lactamase superfamily DKE47_010840 PF04273 Putative phosphatase (DUF442) DKE47_010845 PF00072 Response regulator receiver domain DKE47_010845 PF02954 Bacterial regulatory protein, Fis family DKE47_010845 PF00158 Sigma-54 interaction domain DKE47_010855 PF08240 Alcohol dehydrogenase GroES-like domain DKE47_010855 PF00107 Zinc-binding dehydrogenase DKE47_010860 PF00106 short chain dehydrogenase DKE47_010865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKE47_010865 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE47_010870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKE47_010870 PF00364 Biotin-requiring enzyme DKE47_010870 PF02817 e3 binding domain DKE47_010880 PF00676 Dehydrogenase E1 component DKE47_010885 PF04055 Radical SAM superfamily DKE47_010900 PF00990 Diguanylate cyclase, GGDEF domain DKE47_010900 PF08448 PAS fold DKE47_010910 PF05175 Methyltransferase small domain DKE47_010925 PF00004 ATPase family associated with various cellular activities (AAA) DKE47_010925 PF17862 AAA+ lid domain DKE47_010925 PF01434 Peptidase family M41 DKE47_010935 PF05166 YcgL domain DKE47_011030 PF01230 HIT domain DKE47_011065 PF00005 ABC transporter DKE47_011070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE47_011105 PF01925 Sulfite exporter TauE/SafE DKE47_011110 PF00793 DAHP synthetase I family DKE47_011130 PF02654 Cobalamin-5-phosphate synthase DKE47_011140 PF00300 Histidine phosphatase superfamily (branch 1) DKE47_011150 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DKE47_011185 PF03109 ABC1 family DKE47_011230 PF02082 Transcriptional regulator DKE47_011240 PF01592 NifU-like N terminal domain DKE47_011245 PF01521 Iron-sulphur cluster biosynthesis DKE47_011250 PF07743 HSCB C-terminal oligomerisation domain DKE47_011250 PF00226 DnaJ domain DKE47_011255 PF00012 Hsp70 protein DKE47_011260 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE47_011300 PF13460 NAD(P)H-binding DKE47_011335 PF00528 Binding-protein-dependent transport system inner membrane component DKE47_011390 PF02472 Biopolymer transport protein ExbD/TolR DKE47_011445 PF00216 Bacterial DNA-binding protein DKE47_011455 PF02224 Cytidylate kinase DKE47_011495 PF02501 Type II secretion system (T2SS), protein I DKE47_011495 PF07963 Prokaryotic N-terminal methylation motif DKE47_011510 PF01026 TatD related DNase DKE47_011525 PF02348 Cytidylyltransferase DKE47_011535 PF00005 ABC transporter DKE47_011535 PF00664 ABC transporter transmembrane region DKE47_011550 PF13614 AAA domain DKE47_011560 PF00483 Nucleotidyl transferase DKE47_011580 PF01116 Fructose-bisphosphate aldolase class-II DKE47_011625 PF06912 Protein of unknown function (DUF1275) DKE47_011630 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DKE47_011635 PF00005 ABC transporter DKE47_011635 PF00664 ABC transporter transmembrane region DKE47_011650 PF01597 Glycine cleavage H-protein DKE47_011655 PF02146 Sir2 family DKE47_011660 PF00474 Sodium:solute symporter family DKE47_011665 PF01037 Lrp/AsnC ligand binding domain DKE47_011680 PF04229 GrpB protein DKE47_011705 PF04264 YceI-like domain DKE47_011720 PF00438 S-adenosylmethionine synthetase, N-terminal domain DKE47_011720 PF02773 S-adenosylmethionine synthetase, C-terminal domain DKE47_011720 PF02772 S-adenosylmethionine synthetase, central domain DKE47_011750 PF02075 Crossover junction endodeoxyribonuclease RuvC DKE47_011760 PF08331 Domain of unknown function (DUF1730) DKE47_011780 PF16970 Type-1 fimbrial protein, A DKE47_011825 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DKE47_011870 PF13737 Transposase DDE domain DKE47_011880 PF01709 Transcriptional regulator DKE47_011885 PF01037 Lrp/AsnC ligand binding domain DKE47_011905 PF00528 Binding-protein-dependent transport system inner membrane component DKE47_011920 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DKE47_011920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE47_011940 PF03180 NLPA lipoprotein DKE47_011945 PF00005 ABC transporter DKE47_011945 PF09383 NIL domain DKE47_011955 PF01926 50S ribosome-binding GTPase DKE47_011955 PF06071 Protein of unknown function (DUF933) DKE47_011980 PF03591 AzlC protein DKE47_011995 PF02222 ATP-grasp domain DKE47_012010 PF01810 LysE type translocator DKE47_012020 PF00255 Glutathione peroxidase DKE47_012055 PF00588 SpoU rRNA Methylase family DKE47_012100 PF01022 Bacterial regulatory protein, arsR family DKE47_012140 PF01177 Asp/Glu/Hydantoin racemase DKE47_012145 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DKE47_012200 PF01654 Cytochrome bd terminal oxidase subunit I DKE47_012205 PF02322 Cytochrome bd terminal oxidase subunit II DKE47_012265 PF16957 Malonate decarboxylase, alpha subunit, transporter DKE47_012285 PF04172 LrgB-like family DKE47_012300 PF14834 Glutathione S-transferase, C-terminal domain DKE47_012300 PF02798 Glutathione S-transferase, N-terminal domain DKE47_012305 PF02798 Glutathione S-transferase, N-terminal domain DKE47_012310 PF03466 LysR substrate binding domain DKE47_012310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_012320 PF00581 Rhodanese-like domain DKE47_012335 PF00266 Aminotransferase class-V DKE47_012340 PF01810 LysE type translocator DKE47_012345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_012345 PF03466 LysR substrate binding domain DKE47_012360 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE47_012370 PF00528 Binding-protein-dependent transport system inner membrane component DKE47_012375 PF00528 Binding-protein-dependent transport system inner membrane component DKE47_012405 PF01037 Lrp/AsnC ligand binding domain DKE47_012405 PF13404 AsnC-type helix-turn-helix domain DKE47_012510 PF13193 AMP-binding enzyme C-terminal domain DKE47_012510 PF00501 AMP-binding enzyme DKE47_012520 PF00440 Bacterial regulatory proteins, tetR family DKE47_012525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE47_012525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE47_012525 PF02770 Acyl-CoA dehydrogenase, middle domain DKE47_012535 PF00378 Enoyl-CoA hydratase/isomerase DKE47_012540 PF00364 Biotin-requiring enzyme DKE47_012540 PF00289 Biotin carboxylase, N-terminal domain DKE47_012540 PF02785 Biotin carboxylase C-terminal domain DKE47_012540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE47_012585 PF01144 Coenzyme A transferase DKE47_012590 PF01144 Coenzyme A transferase DKE47_012600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE47_012600 PF02770 Acyl-CoA dehydrogenase, middle domain DKE47_012600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE47_012605 PF00378 Enoyl-CoA hydratase/isomerase DKE47_012615 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DKE47_012615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DKE47_012615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DKE47_012620 PF02803 Thiolase, C-terminal domain DKE47_012620 PF00108 Thiolase, N-terminal domain DKE47_012625 PF09339 IclR helix-turn-helix domain DKE47_012635 PF01810 LysE type translocator DKE47_012665 PF02515 CoA-transferase family III DKE47_012670 PF02770 Acyl-CoA dehydrogenase, middle domain DKE47_012670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE47_012670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE47_012690 PF01266 FAD dependent oxidoreductase DKE47_012715 PF01494 FAD binding domain DKE47_012725 PF02525 Flavodoxin-like fold DKE47_012760 PF00171 Aldehyde dehydrogenase family DKE47_012765 PF00296 Luciferase-like monooxygenase DKE47_012775 PF12697 Alpha/beta hydrolase family DKE47_012795 PF01292 Prokaryotic cytochrome b561 DKE47_012805 PF01638 HxlR-like helix-turn-helix DKE47_012830 PF13737 Transposase DDE domain DKE47_012855 PF03061 Thioesterase superfamily DKE47_012860 PF00132 Bacterial transferase hexapeptide (six repeats) DKE47_012865 PF07848 PaaX-like protein DKE47_012865 PF08223 PaaX-like protein C-terminal domain DKE47_012900 PF01883 Iron-sulfur cluster assembly protein DKE47_012910 PF06243 Phenylacetic acid degradation B DKE47_012915 PF05138 Phenylacetic acid catabolic protein DKE47_012945 PF02677 Epoxyqueuosine reductase QueH DKE47_012965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DKE47_012970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_012970 PF03466 LysR substrate binding domain DKE47_013090 PF03466 LysR substrate binding domain DKE47_013090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_013115 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE47_013125 PF01402 Ribbon-helix-helix protein, copG family DKE47_013125 PF08753 NikR C terminal nickel binding domain DKE47_013135 PF01638 HxlR-like helix-turn-helix DKE47_013160 PF08240 Alcohol dehydrogenase GroES-like domain DKE47_013160 PF13823 Alcohol dehydrogenase GroES-associated DKE47_013160 PF00107 Zinc-binding dehydrogenase DKE47_013170 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DKE47_013170 PF12833 Helix-turn-helix domain DKE47_013210 PF00654 Voltage gated chloride channel DKE47_013225 PF07286 Protein of unknown function (DUF1445) DKE47_013260 PF05114 Protein of unknown function (DUF692) DKE47_013305 PF06629 MltA-interacting protein MipA DKE47_013310 PF00202 Aminotransferase class-III DKE47_013445 PF07739 TipAS antibiotic-recognition domain DKE47_013445 PF13411 MerR HTH family regulatory protein DKE47_013455 PF00117 Glutamine amidotransferase class-I DKE47_013460 PF01053 Cys/Met metabolism PLP-dependent enzyme DKE47_013470 PF01037 Lrp/AsnC ligand binding domain DKE47_013470 PF13404 AsnC-type helix-turn-helix domain DKE47_013485 PF07715 TonB-dependent Receptor Plug Domain DKE47_013590 PF11953 Domain of unknown function (DUF3470) DKE47_013590 PF00037 4Fe-4S binding domain DKE47_013610 PF00132 Bacterial transferase hexapeptide (six repeats) DKE47_013625 PF00005 ABC transporter DKE47_013625 PF00664 ABC transporter transmembrane region DKE47_013625 PF03412 Peptidase C39 family DKE47_013630 PF02321 Outer membrane efflux protein DKE47_013635 PF00005 ABC transporter DKE47_013635 PF12399 Branched-chain amino acid ATP-binding cassette transporter DKE47_013640 PF03968 OstA-like protein DKE47_013655 PF00571 CBS domain DKE47_013655 PF01380 SIS domain DKE47_013660 PF01406 tRNA synthetases class I (C) catalytic domain DKE47_013660 PF09190 DALR domain DKE47_013670 PF00589 Phage integrase family DKE47_013870 PF09588 YqaJ-like viral recombinase domain DKE47_013885 PF02954 Bacterial regulatory protein, Fis family DKE47_013955 PF13936 Helix-turn-helix domain DKE47_013955 PF00665 Integrase core domain DKE47_013985 PF00313 'Cold-shock' DNA-binding domain DKE47_013990 PF01810 LysE type translocator DKE47_014055 PF09278 MerR, DNA binding DKE47_014055 PF00376 MerR family regulatory protein DKE47_014080 PF06099 Phenol hydroxylase subunit DKE47_014090 PF02406 MmoB/DmpM family DKE47_014105 PF00970 Oxidoreductase FAD-binding domain DKE47_014105 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE47_014105 PF00175 Oxidoreductase NAD-binding domain DKE47_014125 PF00866 Ring hydroxylating beta subunit DKE47_014130 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE47_014130 PF00175 Oxidoreductase NAD-binding domain DKE47_014130 PF00970 Oxidoreductase FAD-binding domain DKE47_014160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DKE47_014160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DKE47_014170 PF00578 AhpC/TSA family DKE47_014170 PF10417 C-terminal domain of 1-Cys peroxiredoxin DKE47_014190 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE47_014190 PF13192 Thioredoxin domain DKE47_014200 PF00043 Glutathione S-transferase, C-terminal domain DKE47_014200 PF02798 Glutathione S-transferase, N-terminal domain DKE47_014210 PF02390 Putative methyltransferase DKE47_014215 PF00043 Glutathione S-transferase, C-terminal domain DKE47_014215 PF13417 Glutathione S-transferase, N-terminal domain DKE47_014225 PF13488 Glycine zipper DKE47_014225 PF00691 OmpA family DKE47_014235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DKE47_014235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DKE47_014275 PF02566 OsmC-like protein DKE47_014280 PF00027 Cyclic nucleotide-binding domain DKE47_014280 PF13545 Crp-like helix-turn-helix domain DKE47_014305 PF13393 Histidyl-tRNA synthetase DKE47_014325 PF02599 Global regulator protein family DKE47_014350 PF00860 Permease family DKE47_014365 PF00106 short chain dehydrogenase DKE47_014375 PF17954 Quercetinase C-terminal cupin domain DKE47_014375 PF02678 Pirin DKE47_014380 PF00440 Bacterial regulatory proteins, tetR family DKE47_014380 PF17932 Tetracyclin repressor-like, C-terminal domain DKE47_014390 PF00106 short chain dehydrogenase DKE47_014415 PF00106 short chain dehydrogenase DKE47_014420 PF07859 alpha/beta hydrolase fold DKE47_014440 PF07690 Major Facilitator Superfamily DKE47_014450 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE47_014450 PF00175 Oxidoreductase NAD-binding domain DKE47_014470 PF00378 Enoyl-CoA hydratase/isomerase DKE47_014515 PF13936 Helix-turn-helix domain DKE47_014515 PF00665 Integrase core domain DKE47_014530 PF00171 Aldehyde dehydrogenase family DKE47_014540 PF04958 Arginine N-succinyltransferase beta subunit DKE47_014545 PF00202 Aminotransferase class-III DKE47_014565 PF00392 Bacterial regulatory proteins, gntR family DKE47_014565 PF07729 FCD domain DKE47_014580 PF01266 FAD dependent oxidoreductase DKE47_014595 PF05643 Putative bacterial lipoprotein (DUF799) DKE47_014605 PF03783 Curli production assembly/transport component CsgG DKE47_014670 PF16671 Actin cross-linking domain DKE47_014670 PF04717 Type VI secretion system, phage-baseplate injector DKE47_014865 PF00589 Phage integrase family DKE47_014865 PF13356 Arm DNA-binding domain DKE47_014930 PF00528 Binding-protein-dependent transport system inner membrane component DKE47_014930 PF12911 N-terminal TM domain of oligopeptide transport permease C DKE47_014970 PF04972 BON domain DKE47_014975 PF02021 Uncharacterised protein family UPF0102 DKE47_014990 PF01810 LysE type translocator DKE47_015020 PF00557 Metallopeptidase family M24 DKE47_015020 PF05195 Aminopeptidase P, N-terminal domain DKE47_015065 PF03895 YadA-like membrane anchor domain DKE47_015065 PF05658 Head domain of trimeric autotransporter adhesin DKE47_015065 PF05662 Coiled stalk of trimeric autotransporter adhesin DKE47_015065 PF03895 YadA-like membrane anchor domain DKE47_015065 PF13018 Extended Signal Peptide of Type V secretion system DKE47_015065 PF05658 Head domain of trimeric autotransporter adhesin DKE47_015065 PF05662 Coiled stalk of trimeric autotransporter adhesin DKE47_015065 PF13018 Extended Signal Peptide of Type V secretion system DKE47_015065 PF13018 Extended Signal Peptide of Type V secretion system DKE47_015065 PF05658 Head domain of trimeric autotransporter adhesin DKE47_015065 PF05662 Coiled stalk of trimeric autotransporter adhesin DKE47_015065 PF03895 YadA-like membrane anchor domain DKE47_015085 PF02590 Predicted SPOUT methyltransferase DKE47_015090 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DKE47_015110 PF00730 HhH-GPD superfamily base excision DNA repair protein DKE47_015110 PF00633 Helix-hairpin-helix motif DKE47_015110 PF10576 Iron-sulfur binding domain of endonuclease III DKE47_015115 PF05191 Adenylate kinase, active site lid DKE47_015130 PF00905 Penicillin binding protein transpeptidase domain DKE47_015130 PF03717 Penicillin-binding Protein dimerisation domain DKE47_015150 PF02492 CobW/HypB/UreG, nucleotide-binding domain DKE47_015160 PF02814 UreE urease accessory protein, N-terminal domain DKE47_015160 PF05194 UreE urease accessory protein, C-terminal domain DKE47_015170 PF00699 Urease beta subunit DKE47_015175 PF00547 Urease, gamma subunit DKE47_015180 PF01774 UreD urease accessory protein DKE47_015195 PF00463 Isocitrate lyase family DKE47_015225 PF00009 Elongation factor Tu GTP binding domain DKE47_015260 PF00301 Rubredoxin DKE47_015265 PF18113 Rubredoxin binding C-terminal domain DKE47_015265 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE47_015270 PF00561 alpha/beta hydrolase fold DKE47_015275 PF03466 LysR substrate binding domain DKE47_015275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_015290 PF00912 Transglycosylase DKE47_015310 PF13472 GDSL-like Lipase/Acylhydrolase family DKE47_015315 PF00484 Carbonic anhydrase DKE47_015335 PF01521 Iron-sulphur cluster biosynthesis DKE47_015335 PF01106 NifU-like domain DKE47_015355 PF03781 Sulfatase-modifying factor enzyme 1 DKE47_015375 PF01384 Phosphate transporter family DKE47_015415 PF07690 Major Facilitator Superfamily DKE47_015420 PF07883 Cupin domain DKE47_015420 PF12833 Helix-turn-helix domain DKE47_015430 PF01327 Polypeptide deformylase DKE47_015485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE47_015495 PF00355 Rieske [2Fe-2S] domain DKE47_015505 PF00355 Rieske [2Fe-2S] domain DKE47_015510 PF01614 Bacterial transcriptional regulator DKE47_015510 PF09339 IclR helix-turn-helix domain DKE47_015530 PF13737 Transposase DDE domain DKE47_015540 PF00378 Enoyl-CoA hydratase/isomerase DKE47_015550 PF00535 Glycosyl transferase family 2 DKE47_015560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE47_015585 PF03061 Thioesterase superfamily DKE47_015605 PF00440 Bacterial regulatory proteins, tetR family DKE47_015605 PF13977 BetI-type transcriptional repressor, C-terminal DKE47_015655 PF00701 Dihydrodipicolinate synthetase family DKE47_015715 PF13737 Transposase DDE domain DKE47_015755 PF13533 Biotin-lipoyl like DKE47_015760 PF03061 Thioesterase superfamily DKE47_015765 PF00490 Delta-aminolevulinic acid dehydratase DKE47_015770 PF01266 FAD dependent oxidoreductase DKE47_015775 PF08338 Domain of unknown function (DUF1731) DKE47_015775 PF01370 NAD dependent epimerase/dehydratase family DKE47_015825 PF00437 Type II/IV secretion system protein DKE47_015835 PF01475 Ferric uptake regulator family DKE47_015845 PF03658 RnfH family Ubiquitin DKE47_015885 PF00692 dUTPase DKE47_015895 PF00691 OmpA family DKE47_015895 PF13488 Glycine zipper DKE47_015915 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DKE47_015920 PF03776 Septum formation topological specificity factor MinE DKE47_015940 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE47_015955 PF00583 Acetyltransferase (GNAT) family DKE47_015975 PF14492 Elongation Factor G, domain II DKE47_015975 PF00679 Elongation factor G C-terminus DKE47_015975 PF03144 Elongation factor Tu domain 2 DKE47_015975 PF00009 Elongation factor Tu GTP binding domain DKE47_015975 PF03764 Elongation factor G, domain IV DKE47_015985 PF00164 Ribosomal protein S12/S23 DKE47_015995 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE47_015995 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE47_016015 PF00795 Carbon-nitrogen hydrolase DKE47_016015 PF02540 NAD synthase DKE47_016030 PF00970 Oxidoreductase FAD-binding domain DKE47_016030 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE47_016030 PF00175 Oxidoreductase NAD-binding domain DKE47_016045 PF07859 alpha/beta hydrolase fold DKE47_016055 PF00180 Isocitrate/isopropylmalate dehydrogenase DKE47_016080 PF00037 4Fe-4S binding domain DKE47_016085 PF01467 Cytidylyltransferase-like DKE47_016090 PF01668 SmpB protein DKE47_016100 PF03358 NADPH-dependent FMN reductase DKE47_016110 PF01479 S4 domain DKE47_016110 PF00849 RNA pseudouridylate synthase DKE47_016115 PF13525 Outer membrane lipoprotein DKE47_016135 PF03550 Outer membrane lipoprotein LolB DKE47_016140 PF00288 GHMP kinases N terminal domain DKE47_016140 PF08544 GHMP kinases C terminal DKE47_016165 PF14572 Phosphoribosyl synthetase-associated domain DKE47_016165 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKE47_016170 PF01386 Ribosomal L25p family DKE47_016175 PF01195 Peptidyl-tRNA hydrolase DKE47_016180 PF02261 Aspartate decarboxylase DKE47_016210 PF02581 Thiamine monophosphate synthase DKE47_016210 PF03070 TENA/THI-4/PQQC family DKE47_016210 PF08543 Phosphomethylpyrimidine kinase DKE47_016215 PF01476 LysM domain DKE47_016215 PF04972 BON domain DKE47_016220 PF00550 Phosphopantetheine attachment site DKE47_016230 PF00698 Acyl transferase domain DKE47_016235 PF01783 Ribosomal L32p protein family DKE47_016240 PF02620 Large ribosomal RNA subunit accumulation protein YceD DKE47_016245 PF04315 Elongation factor P hydroxylase DKE47_016250 PF01300 Telomere recombination DKE47_016255 PF02616 Segregation and condensation protein ScpA DKE47_016260 PF04079 Segregation and condensation complex subunit ScpB DKE47_016265 PF00849 RNA pseudouridylate synthase DKE47_016265 PF01479 S4 domain DKE47_016280 PF00155 Aminotransferase class I and II DKE47_016295 PF02358 Trehalose-phosphatase DKE47_016300 PF00982 Glycosyltransferase family 20 DKE47_016310 PF00210 Ferritin-like domain DKE47_016345 PF03309 Type III pantothenate kinase DKE47_016360 PF01207 Dihydrouridine synthase (Dus) DKE47_016395 PF00692 dUTPase DKE47_016410 PF01048 Phosphorylase superfamily DKE47_016415 PF10609 NUBPL iron-transfer P-loop NTPase DKE47_016495 PF00970 Oxidoreductase FAD-binding domain DKE47_016495 PF00175 Oxidoreductase NAD-binding domain DKE47_016510 PF00313 'Cold-shock' DNA-binding domain DKE47_016530 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DKE47_016530 PF00361 Proton-conducting membrane transporter DKE47_016535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE47_016540 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DKE47_016545 PF12838 4Fe-4S dicluster domain DKE47_016550 PF00146 NADH dehydrogenase DKE47_016570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DKE47_016570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DKE47_016575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DKE47_016580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DKE47_016585 PF00990 Diguanylate cyclase, GGDEF domain DKE47_016585 PF17151 Periplasmic sensor domain DKE47_016600 PF00072 Response regulator receiver domain DKE47_016600 PF00486 Transcriptional regulatory protein, C terminal DKE47_016610 PF02867 Ribonucleotide reductase, barrel domain DKE47_016610 PF03477 ATP cone domain DKE47_016610 PF00317 Ribonucleotide reductase, all-alpha domain DKE47_016620 PF00268 Ribonucleotide reductase, small chain DKE47_016690 PF01613 Flavin reductase like domain DKE47_016705 PF03466 LysR substrate binding domain DKE47_016705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_016715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_016715 PF03466 LysR substrate binding domain DKE47_016780 PF08240 Alcohol dehydrogenase GroES-like domain DKE47_016780 PF00107 Zinc-binding dehydrogenase DKE47_016815 PF01960 ArgJ family DKE47_016855 PF00834 Ribulose-phosphate 3 epimerase family DKE47_016875 PF00814 Glycoprotease family DKE47_016885 PF00293 NUDIX domain DKE47_016950 PF01722 BolA-like protein DKE47_016955 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DKE47_017015 PF01047 MarR family DKE47_017020 PF02566 OsmC-like protein DKE47_017025 PF00437 Type II/IV secretion system protein DKE47_017050 PF02325 YGGT family DKE47_017070 PF02541 Ppx/GppA phosphatase family DKE47_017075 PF00085 Thioredoxin DKE47_017090 PF00216 Bacterial DNA-binding protein DKE47_017120 PF00453 Ribosomal protein L20 DKE47_017125 PF01632 Ribosomal protein L35 DKE47_017155 PF13193 AMP-binding enzyme C-terminal domain DKE47_017155 PF00501 AMP-binding enzyme DKE47_017160 PF04751 Protein of unknown function (DUF615) DKE47_017165 PF00381 PTS HPr component phosphorylation site DKE47_017180 PF02548 Ketopantoate hydroxymethyltransferase DKE47_017245 PF01261 Xylose isomerase-like TIM barrel DKE47_017255 PF00106 short chain dehydrogenase DKE47_017260 PF02233 NAD(P) transhydrogenase beta subunit DKE47_017265 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DKE47_017285 PF07690 Major Facilitator Superfamily DKE47_017315 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE47_017335 PF01022 Bacterial regulatory protein, arsR family DKE47_017340 PF03960 ArsC family DKE47_017345 PF13411 MerR HTH family regulatory protein DKE47_017375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE47_017425 PF00072 Response regulator receiver domain DKE47_017425 PF00486 Transcriptional regulatory protein, C terminal DKE47_017515 PF01207 Dihydrouridine synthase (Dus) DKE47_017545 PF01026 TatD related DNase DKE47_017560 PF03144 Elongation factor Tu domain 2 DKE47_017560 PF00009 Elongation factor Tu GTP binding domain DKE47_017560 PF16658 Class II release factor RF3, C-terminal domain DKE47_017605 PF16925 Tetracyclin repressor-like, C-terminal domain DKE47_017605 PF00440 Bacterial regulatory proteins, tetR family DKE47_017635 PF00756 Putative esterase DKE47_017640 PF08240 Alcohol dehydrogenase GroES-like domain DKE47_017640 PF00107 Zinc-binding dehydrogenase DKE47_017645 PF02583 Metal-sensitive transcriptional repressor DKE47_017650 PF14765 Polyketide synthase dehydratase DKE47_017650 PF00698 Acyl transferase domain DKE47_017650 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE47_017650 PF08240 Alcohol dehydrogenase GroES-like domain DKE47_017650 PF16197 Ketoacyl-synthetase C-terminal extension DKE47_017650 PF00550 Phosphopantetheine attachment site DKE47_017650 PF08659 KR domain DKE47_017650 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE47_017655 PF08240 Alcohol dehydrogenase GroES-like domain DKE47_017655 PF00107 Zinc-binding dehydrogenase DKE47_017670 PF00106 short chain dehydrogenase DKE47_017675 PF08240 Alcohol dehydrogenase GroES-like domain DKE47_017675 PF00107 Zinc-binding dehydrogenase DKE47_017690 PF13784 Fic/DOC family N-terminal DKE47_017690 PF02661 Fic/DOC family DKE47_017835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DKE47_017835 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DKE47_017840 PF10369 Small subunit of acetolactate synthase DKE47_017855 PF08264 Anticodon-binding domain of tRNA DKE47_017855 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE47_017855 PF00133 tRNA synthetases class I (I, L, M and V) DKE47_017855 PF09334 tRNA synthetases class I (M) DKE47_017900 PF03193 RsgA GTPase DKE47_017910 PF00462 Glutaredoxin DKE47_017915 PF02556 Preprotein translocase subunit SecB DKE47_017925 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DKE47_017925 PF01926 50S ribosome-binding GTPase DKE47_017930 PF01011 PQQ enzyme repeat DKE47_017930 PF13360 PQQ-like domain DKE47_017940 PF03129 Anticodon binding domain DKE47_017940 PF13393 Histidyl-tRNA synthetase DKE47_017965 PF00334 Nucleoside diphosphate kinase DKE47_017970 PF04384 Iron-sulphur cluster assembly DKE47_017975 PF01569 PAP2 superfamily DKE47_018000 PF12697 Alpha/beta hydrolase family DKE47_018005 PF00171 Aldehyde dehydrogenase family DKE47_018015 PF01202 Shikimate kinase DKE47_018020 PF02447 GntP family permease DKE47_018030 PF00920 Dehydratase family DKE47_018045 PF05683 Fumarase C-terminus DKE47_018045 PF05681 Fumarate hydratase (Fumerase) DKE47_018065 PF00574 Clp protease DKE47_018080 PF18331 PKHD-type hydroxylase C-terminal domain DKE47_018080 PF13640 2OG-Fe(II) oxygenase superfamily DKE47_018085 PF00682 HMGL-like DKE47_018085 PF08502 LeuA allosteric (dimerisation) domain DKE47_018095 PF00561 alpha/beta hydrolase fold DKE47_018095 PF07021 Methionine biosynthesis protein MetW DKE47_018105 PF01725 Ham1 family DKE47_018120 PF02416 mttA/Hcf106 family DKE47_018160 PF00303 Thymidylate synthase DKE47_018165 PF00186 Dihydrofolate reductase DKE47_018180 PF01625 Peptide methionine sulfoxide reductase DKE47_018185 PF02472 Biopolymer transport protein ExbD/TolR DKE47_018190 PF01618 MotA/TolQ/ExbB proton channel family DKE47_018215 PF00830 Ribosomal L28 family DKE47_018245 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DKE47_018250 PF00580 UvrD/REP helicase N-terminal domain DKE47_018250 PF13361 UvrD-like helicase C-terminal domain DKE47_018280 PF01638 HxlR-like helix-turn-helix DKE47_018285 PF08240 Alcohol dehydrogenase GroES-like domain DKE47_018285 PF00107 Zinc-binding dehydrogenase DKE47_018290 PF04102 SlyX DKE47_018310 PF03279 Bacterial lipid A biosynthesis acyltransferase DKE47_018350 PF01416 tRNA pseudouridine synthase DKE47_018360 PF01176 Translation initiation factor 1A / IF-1 DKE47_018375 PF00180 Isocitrate/isopropylmalate dehydrogenase DKE47_018385 PF00694 Aconitase C-terminal domain DKE47_018425 PF00293 NUDIX domain DKE47_018440 PF12706 Beta-lactamase superfamily domain DKE47_018445 PF03466 LysR substrate binding domain DKE47_018445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE47_018455 PF02798 Glutathione S-transferase, N-terminal domain DKE47_018460 PF08279 HTH domain DKE47_018460 PF13280 WYL domain DKE47_018510 PF06969 HemN C-terminal domain DKE47_018510 PF04055 Radical SAM superfamily DKE47_018525 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DKE47_018525 PF02770 Acyl-CoA dehydrogenase, middle domain DKE47_018525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE47_018535 PF03109 ABC1 family DKE47_018540 PF01197 Ribosomal protein L31 DKE47_018570 PF03884 DNA gyrase inhibitor YacG DKE47_018575 PF00753 Metallo-beta-lactamase superfamily DKE47_018610 PF01206 Sulfurtransferase TusA DKE47_018615 PF00571 CBS domain DKE47_018615 PF03471 Transporter associated domain DKE47_018625 PF01588 Putative tRNA binding domain DKE47_018645 PF17764 3′ DNA-binding domain (3′BD) DKE47_018645 PF00271 Helicase conserved C-terminal domain DKE47_018645 PF18074 Primosomal protein N C-terminal domain DKE47_018645 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DKE47_018645 PF00270 DEAD/DEAH box helicase DKE47_018655 PF01430 Hsp33 protein DKE47_018685 PF00312 Ribosomal protein S15 DKE47_018695 PF13538 UvrD-like helicase C-terminal domain DKE47_018730 PF01209 ubiE/COQ5 methyltransferase family DKE47_018745 PF01494 FAD binding domain DKE47_018750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE47_018775 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE47_018790 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DKE47_018800 PF02033 Ribosome-binding factor A DKE47_018815 PF02576 RimP N-terminal domain DKE47_018815 PF17384 RimP C-terminal SH3 domain DKE47_018840 PF00121 Triosephosphate isomerase DKE47_018855 PF06750 Bacterial Peptidase A24 N-terminal domain DKE47_018855 PF01478 Type IV leader peptidase family DKE47_018860 PF01121 Dephospho-CoA kinase DKE47_018875 PF06865 Pyrimidine/purine nucleoside phosphorylase DKE47_018895 PF03652 Holliday junction resolvase DKE47_018910 PF04632 Fusaric acid resistance protein family DKE47_018925 PF12833 Helix-turn-helix domain DKE47_018925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKE47_018925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE47_018925 PF02805 Metal binding domain of Ada DKE47_018930 PF01066 CDP-alcohol phosphatidyltransferase DKE47_018940 PF01541 GIY-YIG catalytic domain DKE47_018940 PF02151 UvrB/uvrC motif DKE47_018940 PF08459 UvrC Helix-hairpin-helix N-terminal DKE47_018970 PF00108 Thiolase, N-terminal domain DKE47_018970 PF02803 Thiolase, C-terminal domain DKE47_019025 PF03553 Na+/H+ antiporter family DKE47_019025 PF13726 Na+-H+ antiporter family DKE47_019065 PF16320 Ribosomal protein L7/L12 dimerisation domain DKE47_019065 PF00542 Ribosomal protein L7/L12 C-terminal domain DKE47_019070 PF00466 Ribosomal protein L10 DKE47_019075 PF00687 Ribosomal protein L1p/L10e family DKE47_019080 PF00298 Ribosomal protein L11, RNA binding domain DKE47_019080 PF03946 Ribosomal protein L11, N-terminal domain DKE47_019085 PF02357 Transcription termination factor nusG DKE47_019085 PF00467 KOW motif DKE47_019090 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DKE47_019100 PF03144 Elongation factor Tu domain 2 DKE47_019100 PF03143 Elongation factor Tu C-terminal domain DKE47_019100 PF00009 Elongation factor Tu GTP binding domain DKE47_019125 PF04715 Anthranilate synthase component I, N terminal region DKE47_019125 PF00425 chorismate binding enzyme DKE47_019130 PF13419 Haloacid dehalogenase-like hydrolase DKE47_019135 PF00498 FHA domain DKE47_019135 PF12401 Protein of unknown function (DUF2662) DKE47_019185 PF00072 Response regulator receiver domain DKE47_019185 PF04397 LytTr DNA-binding domain DKE47_019190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE47_019190 PF07694 5TMR of 5TMR-LYT DKE47_019190 PF06580 Histidine kinase DKE47_019195 PF14698 Argininosuccinate lyase C-terminal DKE47_019195 PF00206 Lyase DKE47_019200 PF04362 Bacterial Fe(2+) trafficking DKE47_019205 PF01895 PhoU domain DKE47_019230 PF13667 ThiC-associated domain DKE47_019230 PF01964 Radical SAM ThiC family DKE47_019235 PF00293 NUDIX domain DKE47_019245 PF01258 Prokaryotic dksA/traR C4-type zinc finger DKE47_019250 PF00749 tRNA synthetases class I (E and Q), catalytic domain DKE47_019260 PF08245 Mur ligase middle domain DKE47_019260 PF02875 Mur ligase family, glutamate ligase domain DKE47_019280 PF00589 Phage integrase family DKE47_019280 PF02899 Phage integrase, N-terminal SAM-like domain DKE47_019290 PF03447 Homoserine dehydrogenase, NAD binding domain DKE47_019290 PF00742 Homoserine dehydrogenase DKE47_019290 PF01842 ACT domain DKE47_019295 PF00291 Pyridoxal-phosphate dependent enzyme DKE47_019300 PF00768 D-alanyl-D-alanine carboxypeptidase DKE47_019320 PF03572 Peptidase family S41 DKE47_019320 PF00595 PDZ domain DKE47_019330 PF03739 Lipopolysaccharide export system permease LptF/LptG DKE47_019340 PF00883 Cytosol aminopeptidase family, catalytic domain DKE47_019340 PF02789 Cytosol aminopeptidase family, N-terminal domain DKE47_019375 PF03477 ATP cone domain DKE47_019380 PF00909 Ammonium Transporter Family DKE47_019385 PF00543 Nitrogen regulatory protein P-II DKE47_019455 PF16916 Dimerisation domain of Zinc Transporter DKE47_019455 PF01545 Cation efflux family DKE47_019460 PF01022 Bacterial regulatory protein, arsR family DKE47_019470 PF00376 MerR family regulatory protein DKE47_019470 PF09278 MerR, DNA binding DKE47_019525 PF01078 Magnesium chelatase, subunit ChlI DKE47_019525 PF13335 Magnesium chelatase, subunit ChlI C-terminal DKE47_019560 PF00719 Inorganic pyrophosphatase DKE47_019585 PF07690 Major Facilitator Superfamily DKE47_019590 PF03458 UPF0126 domain DKE47_019595 PF02810 SEC-C motif DKE47_019605 PF03641 Possible lysine decarboxylase DKE47_019655 PF03358 NADPH-dependent FMN reductase DKE47_019670 PF00291 Pyridoxal-phosphate dependent enzyme DKE47_019705 PF00440 Bacterial regulatory proteins, tetR family DKE47_019730 PF01327 Polypeptide deformylase DKE47_019740 PF17782 DprA winged helix domain DKE47_019740 PF02481 DNA recombination-mediator protein A DKE47_019770 PF00255 Glutathione peroxidase DKE47_019780 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DKE47_019785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE47_019785 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKE47_019790 PF00231 ATP synthase DKE47_019800 PF00213 ATP synthase delta (OSCP) subunit DKE47_019810 PF00137 ATP synthase subunit C DKE47_019815 PF00119 ATP synthase A chain DKE47_019840 PF00950 ABC 3 transport family DKE47_019845 PF01810 LysE type translocator DKE47_019850 PF04261 Dyp-type peroxidase family DKE47_019880 PF05726 Pirin C-terminal cupin domain DKE47_019880 PF02678 Pirin DKE47_019890 PF01475 Ferric uptake regulator family DKE47_019900 PF13302 Acetyltransferase (GNAT) domain DKE47_019905 PF00117 Glutamine amidotransferase class-I DKE47_019905 PF00958 GMP synthase C terminal domain DKE47_019905 PF02540 NAD synthase DKE47_019910 PF04286 Protein of unknown function (DUF445) DKE47_019910 PF04286 Protein of unknown function (DUF445) DKE47_019915 PF07681 DoxX DKE47_019945 PF01722 BolA-like protein DKE47_019985 PF00975 Thioesterase domain DKE47_019985 PF00550 Phosphopantetheine attachment site DKE47_019985 PF00501 AMP-binding enzyme DKE47_019985 PF13193 AMP-binding enzyme C-terminal domain DKE47_019985 PF00668 Condensation domain DKE47_019990 PF00550 Phosphopantetheine attachment site DKE47_019990 PF08659 KR domain DKE47_019990 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE47_019990 PF14765 Polyketide synthase dehydratase DKE47_019990 PF16197 Ketoacyl-synthetase C-terminal extension DKE47_019990 PF00698 Acyl transferase domain DKE47_019990 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE47_020000 PF00501 AMP-binding enzyme DKE47_020025 PF00378 Enoyl-CoA hydratase/isomerase DKE47_020040 PF13193 AMP-binding enzyme C-terminal domain DKE47_020040 PF00501 AMP-binding enzyme DKE47_020055 PF00171 Aldehyde dehydrogenase family DKE47_020075 PF01042 Endoribonuclease L-PSP DKE47_020080 PF00842 Alanine racemase, C-terminal domain DKE47_020080 PF01168 Alanine racemase, N-terminal domain DKE47_020085 PF01266 FAD dependent oxidoreductase DKE47_020090 PF01037 Lrp/AsnC ligand binding domain DKE47_020165 PF01844 HNH endonuclease DKE47_020185 PF00285 Citrate synthase, C-terminal domain DKE47_020195 PF00392 Bacterial regulatory proteins, gntR family DKE47_020195 PF07729 FCD domain DKE47_020200 PF00155 Aminotransferase class I and II DKE47_020210 PF01070 FMN-dependent dehydrogenase DKE47_020215 PF07729 FCD domain DKE47_020215 PF00392 Bacterial regulatory proteins, gntR family DKE47_020240 PF16363 GDP-mannose 4,6 dehydratase DKE47_020250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DKE47_020250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DKE47_020250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DKE47_020255 PF00483 Nucleotidyl transferase DKE47_020270 PF13439 Glycosyltransferase Family 4 DKE47_020270 PF00534 Glycosyl transferases group 1 DKE47_020300 PF05523 WxcM-like, C-terminal DKE47_020305 PF00483 Nucleotidyl transferase DKE47_020315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DKE47_020315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DKE47_020315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DKE47_020320 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DKE47_020320 PF10531 SLBB domain DKE47_020320 PF02563 Polysaccharide biosynthesis/export protein DKE47_020325 PF01451 Low molecular weight phosphotyrosine protein phosphatase DKE47_020335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE47_020335 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DKE47_020340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE47_020340 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DKE47_020345 PF03023 Lipid II flippase MurJ DKE47_020355 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DKE47_020355 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DKE47_020365 PF05506 Domain of unknown function (DUF756) DKE47_020365 PF04185 Phosphoesterase family DKE47_020370 PF03725 3' exoribonuclease family, domain 2 DKE47_020370 PF01138 3' exoribonuclease family, domain 1 DKE47_020375 PF00487 Fatty acid desaturase DKE47_020385 PF00440 Bacterial regulatory proteins, tetR family DKE47_020395 PF01323 DSBA-like thioredoxin domain DKE47_020405 PF13419 Haloacid dehalogenase-like hydrolase DKE47_020435 PF09084 NMT1/THI5 like DKE47_020440 PF00296 Luciferase-like monooxygenase DKE47_020450 PF00005 ABC transporter DKE47_020460 PF01048 Phosphorylase superfamily DKE47_020470 PF06574 FAD synthetase DKE47_020470 PF01687 Riboflavin kinase DKE47_020485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE47_020525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DKE47_020555 PF01025 GrpE DKE47_020560 PF00012 Hsp70 protein DKE47_020595 PF00731 AIR carboxylase DKE47_020610 PF01225 Mur ligase family, catalytic domain DKE47_020610 PF08245 Mur ligase middle domain DKE47_020610 PF02875 Mur ligase family, glutamate ligase domain DKE47_020625 PF03741 Integral membrane protein TerC family DKE47_020635 PF03738 Glutathionylspermidine synthase preATP-grasp DKE47_020640 PF00355 Rieske [2Fe-2S] domain DKE47_020650 PF00156 Phosphoribosyl transferase domain DKE47_020665 PF01545 Cation efflux family DKE47_020665 PF16916 Dimerisation domain of Zinc Transporter DKE47_020670 PF02583 Metal-sensitive transcriptional repressor DKE47_020675 PF10396 GTP-binding protein TrmE N-terminus DKE47_020675 PF12631 MnmE helical domain DKE47_020675 PF01926 50S ribosome-binding GTPase DKE47_020685 PF01809 Putative membrane protein insertion efficiency factor DKE47_020690 PF00825 Ribonuclease P DKE47_020695 PF00468 Ribosomal protein L34 DKE47_020945 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase DKE47_020950 PF01636 Phosphotransferase enzyme family DKE47_021220 PF02195 ParB-like nuclease domain DKE47_021220 PF17762 HTH domain found in ParB protein DKE47_021235 PF00717 Peptidase S24-like DKE47_021440 PF01965 DJ-1/PfpI family DKE47_021450 PF13610 DDE domain DKE47_021515 PF13610 DDE domain DKE47_021525 PF01965 DJ-1/PfpI family DKE47_021580 PF13173 AAA domain DKE47_021580 PF13635 Domain of unknown function (DUF4143) DKE47_021595 PF00809 Pterin binding enzyme DKE47_021615 PF13610 DDE domain DKE47_021670 PF05194 UreE urease accessory protein, C-terminal domain DKE47_021670 PF02814 UreE urease accessory protein, N-terminal domain DKE47_021705 PF04233 Phage Mu protein F like protein DKE47_021735 PF11798 IMS family HHH motif DKE47_021735 PF00817 impB/mucB/samB family DKE47_021735 PF13438 Domain of unknown function (DUF4113) DKE47_021735 PF11799 impB/mucB/samB family C-terminal domain DKE47_021785 PF13356 Arm DNA-binding domain DKE47_021785 PF00589 Phage integrase family DKE47_021810 PF02195 ParB-like nuclease domain DKE47_021810 PF17762 HTH domain found in ParB protein DKE47_021815 PF00245 Alkaline phosphatase DKE47_021940 PF10706 Aminoglycoside-2''-adenylyltransferase DKE47_022030 PF03432 Relaxase/Mobilisation nuclease domain