locus-tag class description DKE48_000030 IPR032818 DedA family DKE48_000030 IPR032816 SNARE associated Golgi protein DKE48_000040 IPR038404 TRAP transporter solute receptor DctP superfamily DKE48_000050 IPR038404 TRAP transporter solute receptor DctP superfamily DKE48_000055 IPR035903 HesB-like domain superfamily DKE48_000055 IPR000361 FeS cluster biogenesis DKE48_000055 IPR016092 FeS cluster insertion protein DKE48_000055 IPR017870 FeS cluster insertion, C-terminal, conserved site DKE48_000055 IPR023063 FeS cluster insertion protein ErpA DKE48_000060 IPR000639 Epoxide hydrolase-like DKE48_000060 IPR000073 Alpha/beta hydrolase fold-1 DKE48_000060 IPR029058 Alpha/Beta hydrolase fold DKE48_000110 IPR000175 Sodium:neurotransmitter symporter DKE48_000110 IPR037272 Sodium:neurotransmitter symporter superfamily DKE48_000120 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DKE48_000120 IPR004573 rRNA small subunit methyltransferase B DKE48_000120 IPR023267 RNA (C5-cytosine) methyltransferase DKE48_000120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_000120 IPR006027 NusB/RsmB/TIM44 DKE48_000120 IPR035926 NusB-like superfamily DKE48_000120 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type DKE48_000130 IPR037237 IlvD/EDD, N-terminal domain DKE48_000130 IPR042096 Dihydroxy-acid dehydratase, C-terminal DKE48_000130 IPR004404 Dihydroxy-acid dehydratase DKE48_000130 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase DKE48_000130 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site DKE48_000160 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DKE48_000160 IPR013572 Transcription regulator MAATS, C-terminal DKE48_000160 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE48_000160 IPR009057 Homeobox-like domain superfamily DKE48_000160 IPR001647 DNA-binding HTH domain, TetR-type DKE48_000180 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DKE48_000180 IPR012724 Chaperone DnaJ DKE48_000180 IPR002939 Chaperone DnaJ, C-terminal DKE48_000180 IPR001623 DnaJ domain DKE48_000180 IPR036869 Chaperone J-domain superfamily DKE48_000180 IPR018253 DnaJ domain, conserved site DKE48_000180 IPR008971 HSP40/DnaJ peptide-binding DKE48_000180 IPR001305 Heat shock protein DnaJ, cysteine-rich domain DKE48_000205 IPR036812 NADP-dependent oxidoreductase domain superfamily DKE48_000205 IPR023210 NADP-dependent oxidoreductase domain DKE48_000205 IPR020471 Aldo/keto reductase DKE48_000205 IPR018170 Aldo/keto reductase, conserved site DKE48_000270 IPR008228 Uncharacterised conserved protein UCP006173 DKE48_000270 IPR005358 Putative zinc- or iron-chelating domain containing protein DKE48_000280 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DKE48_000280 IPR021886 MgsA AAA+ ATPase C-terminal DKE48_000280 IPR032423 AAA C-terminal domain DKE48_000280 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_000280 IPR003593 AAA+ ATPase domain DKE48_000280 IPR003959 ATPase, AAA-type, core DKE48_000310 IPR000868 Isochorismatase-like DKE48_000310 IPR036380 Isochorismatase-like superfamily DKE48_000330 IPR005956 4-hydroxyphenylpyruvate dioxygenase DKE48_000330 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal DKE48_000330 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DKE48_000330 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal DKE48_000330 IPR037523 Vicinal oxygen chelate (VOC) domain DKE48_000330 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DKE48_000345 IPR004045 Glutathione S-transferase, N-terminal DKE48_000345 IPR010987 Glutathione S-transferase, C-terminal-like DKE48_000345 IPR034330 Glutathione S-transferases, class Zeta , C-terminal DKE48_000345 IPR005955 Glutathione S-transferases, class Zeta DKE48_000345 IPR004046 Glutathione S-transferase, C-terminal DKE48_000345 IPR040079 Glutathione Transferase family DKE48_000345 IPR034333 Glutathione S-transferases, class Zeta , N-terminal DKE48_000345 IPR036249 Thioredoxin-like superfamily DKE48_000345 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DKE48_000355 IPR004841 Amino acid permease/ SLC12A domain DKE48_000355 IPR004840 Amino acid permease, conserved site DKE48_000375 IPR010248 Histidine utilization repressor DKE48_000375 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKE48_000375 IPR036390 Winged helix DNA-binding domain superfamily DKE48_000375 IPR011663 UbiC transcription regulator-associated DKE48_000375 IPR000524 Transcription regulator HTH, GntR DKE48_000375 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_000380 IPR010282 Uncharacterised protein family HutD/Ves DKE48_000380 IPR011051 RmlC-like cupin domain superfamily DKE48_000380 IPR014710 RmlC-like jelly roll fold DKE48_000395 IPR004841 Amino acid permease/ SLC12A domain DKE48_000395 IPR004840 Amino acid permease, conserved site DKE48_000400 IPR032466 Metal-dependent hydrolase DKE48_000400 IPR011059 Metal-dependent hydrolase, composite domain superfamily DKE48_000400 IPR005920 Imidazolonepropionase DKE48_000400 IPR006680 Amidohydrolase-related DKE48_000405 IPR006035 Ureohydrolase DKE48_000405 IPR005923 Formiminoglutamase DKE48_000405 IPR020855 Ureohydrolase, manganese-binding site DKE48_000405 IPR023696 Ureohydrolase domain superfamily DKE48_000425 IPR001123 Amino acid exporter protein, LeuE-type DKE48_000480 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_000480 IPR021542 Tn7 transposition regulator TnsC DKE48_000480 IPR003593 AAA+ ATPase domain DKE48_000500 IPR011004 Trimeric LpxA-like superfamily DKE48_000500 IPR029044 Nucleotide-diphospho-sugar transferases DKE48_000500 IPR025877 MobA-like NTP transferase DKE48_000500 IPR018357 Hexapeptide transferase, conserved site DKE48_000500 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase DKE48_000500 IPR038009 GlmU, C-terminal LbH domain DKE48_000500 IPR001451 Hexapeptide repeat DKE48_000505 IPR007686 YutG/PgpA domain DKE48_000505 IPR036681 PgpA-like superfamily DKE48_000505 IPR026037 Phosphatidylglycerophosphatase A DKE48_000510 IPR010918 PurM-like, C-terminal domain DKE48_000510 IPR036676 PurM-like, C-terminal domain superfamily DKE48_000510 IPR016188 PurM-like, N-terminal domain DKE48_000510 IPR036921 PurM-like, N-terminal domain superfamily DKE48_000510 IPR006283 Thiamine-monophosphate kinase DKE48_000515 IPR035926 NusB-like superfamily DKE48_000515 IPR006027 NusB/RsmB/TIM44 DKE48_000515 IPR011605 NusB antitermination factor DKE48_000535 IPR002912 ACT domain DKE48_000535 IPR023214 HAD superfamily DKE48_000535 IPR023190 Phosphoserine phosphatase, domain 2 DKE48_000535 IPR036412 HAD-like superfamily DKE48_000555 IPR003732 D-aminoacyl-tRNA deacylase DTD DKE48_000555 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DKE48_000565 IPR001763 Rhodanese-like domain DKE48_000565 IPR036873 Rhodanese-like domain superfamily DKE48_000565 IPR001307 Thiosulphate sulfurtransferase, conserved site DKE48_000590 IPR016032 Signal transduction response regulator, C-terminal effector DKE48_000590 IPR001867 OmpR/PhoB-type DNA-binding domain DKE48_000590 IPR011006 CheY-like superfamily DKE48_000590 IPR001789 Signal transduction response regulator, receiver domain DKE48_000590 IPR039420 Transcriptional regulatory protein WalR-like DKE48_000590 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_000590 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB DKE48_000600 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_000600 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_000600 IPR036291 NAD(P)-binding domain superfamily DKE48_000610 IPR015424 Pyridoxal phosphate-dependent transferase DKE48_000610 IPR004839 Aminotransferase, class I/classII DKE48_000610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE48_000610 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE48_000615 IPR007383 Protein of unknown function DUF445 DKE48_000675 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKE48_000675 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE48_000675 IPR003594 Histidine kinase/HSP90-like ATPase DKE48_000675 IPR002288 DNA gyrase B subunit, C-terminal DKE48_000675 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DKE48_000675 IPR020568 Ribosomal protein S5 domain 2-type fold DKE48_000675 IPR001241 DNA topoisomerase, type IIA DKE48_000675 IPR018522 DNA topoisomerase, type IIA, conserved site DKE48_000675 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DKE48_000675 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative DKE48_000675 IPR006171 TOPRIM domain DKE48_000675 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DKE48_000685 IPR008979 Galactose-binding-like domain superfamily DKE48_000685 IPR015908 Allantoicase domain DKE48_000685 IPR005164 Allantoicase DKE48_000690 IPR002938 FAD-binding domain DKE48_000690 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_000715 IPR023419 Transthyretin, conserved site DKE48_000715 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily DKE48_000715 IPR014306 Hydroxyisourate hydrolase DKE48_000715 IPR023418 Transthyretin, thyroxine binding site DKE48_000715 IPR023416 Transthyretin/hydroxyisourate hydrolase domain DKE48_000770 IPR006660 Arsenate reductase-like DKE48_000770 IPR036249 Thioredoxin-like superfamily DKE48_000770 IPR006504 Transcriptional regulator Spx/MgsR DKE48_000775 IPR005135 Endonuclease/exonuclease/phosphatase DKE48_000775 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DKE48_000775 IPR020848 AP endonuclease 1, conserved site DKE48_000775 IPR020847 AP endonuclease 1, binding site DKE48_000775 IPR004808 AP endonuclease 1 DKE48_000815 IPR016185 Pre-ATP-grasp domain superfamily DKE48_000815 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DKE48_000815 IPR011095 D-alanine--D-alanine ligase, C-terminal DKE48_000815 IPR005905 D-alanine--D-alanine ligase DKE48_000815 IPR013815 ATP-grasp fold, subdomain 1 DKE48_000815 IPR011761 ATP-grasp fold DKE48_000815 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DKE48_000820 IPR005548 Cell division protein FtsQ/DivIB DKE48_000820 IPR026579 Cell division protein FtsQ DKE48_000820 IPR034746 POTRA domain DKE48_000820 IPR013685 POTRA domain, FtsQ-type DKE48_000835 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal DKE48_000835 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal DKE48_000835 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase DKE48_000835 IPR020568 Ribosomal protein S5 domain 2-type fold DKE48_000865 IPR001727 Gdt1 family DKE48_000870 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE48_000870 IPR001226 Flavodoxin, conserved site DKE48_000870 IPR008254 Flavodoxin/nitric oxide synthase DKE48_000870 IPR002563 Flavin reductase like domain DKE48_000870 IPR001279 Metallo-beta-lactamase DKE48_000870 IPR012349 FMN-binding split barrel DKE48_000870 IPR029039 Flavoprotein-like superfamily DKE48_000875 IPR005358 Putative zinc- or iron-chelating domain containing protein DKE48_000885 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DKE48_000885 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DKE48_000885 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DKE48_000885 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DKE48_000885 IPR005843 Alpha-D-phosphohexomutase, C-terminal DKE48_000885 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DKE48_000885 IPR016066 Alpha-D-phosphohexomutase, conserved site DKE48_000885 IPR005841 Alpha-D-phosphohexomutase superfamily DKE48_000885 IPR006352 Phosphoglucosamine mutase, bacterial type DKE48_000920 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily DKE48_000920 IPR039901 3-deoxy-D-manno-octulosonic acid transferase DKE48_000920 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal DKE48_000925 IPR029028 Alpha/beta knot methyltransferases DKE48_000925 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKE48_000925 IPR006700 Ribosomal RNA small subunit methyltransferase E DKE48_000930 IPR010920 LSM domain superfamily DKE48_000930 IPR008910 Conserved TM helix DKE48_000930 IPR023408 Mechanosensitive ion channel MscS domain superfamily DKE48_000930 IPR006685 Mechanosensitive ion channel MscS DKE48_000930 IPR011066 Mechanosensitive ion channel MscS, C-terminal DKE48_000930 IPR006686 Mechanosensitive ion channel MscS, conserved site DKE48_000930 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DKE48_000950 IPR000868 Isochorismatase-like DKE48_000950 IPR036380 Isochorismatase-like superfamily DKE48_000955 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_000955 IPR036390 Winged helix DNA-binding domain superfamily DKE48_000955 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE48_000955 IPR000485 AsnC-type HTH domain DKE48_000955 IPR011008 Dimeric alpha-beta barrel DKE48_000955 IPR019888 Transcription regulator AsnC-type DKE48_000985 IPR038377 Sodium/glucose symporter superfamily DKE48_000985 IPR001734 Sodium/solute symporter DKE48_000990 IPR007436 Protein of unknown function DUF485 DKE48_001030 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE48_001030 IPR009057 Homeobox-like domain superfamily DKE48_001030 IPR011075 Tetracyclin repressor-like, C-terminal domain DKE48_001030 IPR001647 DNA-binding HTH domain, TetR-type DKE48_001035 IPR020807 Polyketide synthase, dehydratase domain DKE48_001035 IPR016039 Thiolase-like DKE48_001035 IPR006162 Phosphopantetheine attachment site DKE48_001035 IPR009081 Phosphopantetheine binding ACP domain DKE48_001035 IPR042104 Polyketide synthase, dehydratase domain superfamily DKE48_001035 IPR001227 Acyl transferase domain superfamily DKE48_001035 IPR036736 ACP-like superfamily DKE48_001035 IPR014043 Acyl transferase DKE48_001035 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DKE48_001035 IPR013149 Alcohol dehydrogenase, C-terminal DKE48_001035 IPR013154 Alcohol dehydrogenase, N-terminal DKE48_001035 IPR011032 GroES-like superfamily DKE48_001035 IPR018201 Beta-ketoacyl synthase, active site DKE48_001035 IPR014031 Beta-ketoacyl synthase, C-terminal DKE48_001035 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DKE48_001035 IPR032821 Ketoacyl-synthetase, C-terminal extension DKE48_001035 IPR036291 NAD(P)-binding domain superfamily DKE48_001035 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DKE48_001035 IPR020843 Polyketide synthase, enoylreductase domain DKE48_001035 IPR014030 Beta-ketoacyl synthase, N-terminal DKE48_001035 IPR013968 Polyketide synthase, ketoreductase domain DKE48_001035 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DKE48_001050 IPR013785 Aldolase-type TIM barrel DKE48_001050 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase DKE48_001050 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DKE48_001050 IPR029056 Ribokinase-like DKE48_001050 IPR004305 Thiaminase-2/PQQC DKE48_001050 IPR036206 Thiamin phosphate synthase superfamily DKE48_001050 IPR022998 Thiamine phosphate synthase/TenI DKE48_001050 IPR016084 Haem oxygenase-like, multi-helical DKE48_001050 IPR034291 Thiamine phosphate synthase DKE48_001060 IPR036259 MFS transporter superfamily DKE48_001060 IPR011701 Major facilitator superfamily DKE48_001060 IPR020846 Major facilitator superfamily domain DKE48_001065 IPR012340 Nucleic acid-binding, OB-fold DKE48_001065 IPR011344 Single-stranded DNA-binding protein DKE48_001065 IPR000424 Primosome PriB/single-strand DNA-binding DKE48_001075 IPR011606 Branched-chain amino acid transport, permease DKE48_001075 IPR004471 Branched-chain amino acid transport, AzlC DKE48_001090 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE48_001090 IPR015424 Pyridoxal phosphate-dependent transferase DKE48_001090 IPR004839 Aminotransferase, class I/classII DKE48_001090 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_001090 IPR036390 Winged helix DNA-binding domain superfamily DKE48_001090 IPR000524 Transcription regulator HTH, GntR DKE48_001105 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_001105 IPR036390 Winged helix DNA-binding domain superfamily DKE48_001105 IPR000847 Transcription regulator HTH, LysR DKE48_001115 IPR011051 RmlC-like cupin domain superfamily DKE48_001115 IPR008778 Pirin, C-terminal domain DKE48_001115 IPR012093 Pirin DKE48_001115 IPR014710 RmlC-like jelly roll fold DKE48_001115 IPR003829 Pirin, N-terminal domain DKE48_001165 IPR020471 Aldo/keto reductase DKE48_001165 IPR036812 NADP-dependent oxidoreductase domain superfamily DKE48_001165 IPR023210 NADP-dependent oxidoreductase domain DKE48_001165 IPR018170 Aldo/keto reductase, conserved site DKE48_001200 IPR002577 Helix-turn-helix, HxlR type DKE48_001200 IPR011991 ArsR-like helix-turn-helix domain DKE48_001200 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_001200 IPR036390 Winged helix DNA-binding domain superfamily DKE48_001350 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DKE48_001350 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class DKE48_001350 IPR041405 Type III R-M EcoP15I, C-terminal DKE48_001350 IPR002941 DNA methylase N-4/N-6 DKE48_001350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_001415 IPR022357 Major intrinsic protein, conserved site DKE48_001415 IPR000425 Major intrinsic protein DKE48_001415 IPR023743 Aquaporin Z DKE48_001415 IPR034294 Aquaporin transporter DKE48_001415 IPR023271 Aquaporin-like DKE48_001430 IPR013785 Aldolase-type TIM barrel DKE48_001430 IPR011060 Ribulose-phosphate binding barrel DKE48_001430 IPR004651 Histidine biosynthesis, HisF DKE48_001430 IPR006062 Histidine biosynthesis DKE48_001460 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA DKE48_001460 IPR006062 Histidine biosynthesis DKE48_001460 IPR013785 Aldolase-type TIM barrel DKE48_001460 IPR011060 Ribulose-phosphate binding barrel DKE48_001460 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase DKE48_001475 IPR029062 Class I glutamine amidotransferase-like DKE48_001475 IPR017926 Glutamine amidotransferase DKE48_001475 IPR010139 Imidazole glycerol phosphate synthase, subunit H DKE48_001480 IPR000807 Imidazoleglycerol-phosphate dehydratase DKE48_001480 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site DKE48_001480 IPR020568 Ribosomal protein S5 domain 2-type fold DKE48_001480 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily DKE48_001505 IPR016181 Acyl-CoA N-acyltransferase DKE48_001505 IPR000182 GNAT domain DKE48_001505 IPR017255 Acetyltransferase, GNAT, predicted DKE48_001505 IPR023072 Acetyltransferase, YpeA DKE48_001520 IPR005467 Histidine kinase domain DKE48_001520 IPR003660 HAMP domain DKE48_001520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE48_001520 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DKE48_001520 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DKE48_001520 IPR003594 Histidine kinase/HSP90-like ATPase DKE48_001520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DKE48_001525 IPR001789 Signal transduction response regulator, receiver domain DKE48_001525 IPR011006 CheY-like superfamily DKE48_001525 IPR001867 OmpR/PhoB-type DNA-binding domain DKE48_001525 IPR016032 Signal transduction response regulator, C-terminal effector DKE48_001525 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_001525 IPR039420 Transcriptional regulatory protein WalR-like DKE48_001540 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_001540 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_001540 IPR036291 NAD(P)-binding domain superfamily DKE48_001650 IPR034408 Sulphate/thiosulphate-binding site DKE48_001650 IPR000957 Sulphate/thiosulphate-binding, conserved site DKE48_001650 IPR005669 Thiosulphate/Sulfate-binding protein DKE48_001675 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase DKE48_001675 IPR035911 MurE/MurF, N-terminal DKE48_001675 IPR013221 Mur ligase, central DKE48_001675 IPR036615 Mur ligase, C-terminal domain superfamily DKE48_001675 IPR004101 Mur ligase, C-terminal DKE48_001675 IPR036565 Mur-like, catalytic domain superfamily DKE48_001675 IPR000713 Mur ligase, N-terminal catalytic domain DKE48_001690 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted DKE48_001690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_001690 IPR025714 Methyltransferase domain DKE48_001745 IPR023753 FAD/NAD(P)-binding domain DKE48_001745 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_001745 IPR028261 Dihydroprymidine dehydrogenase domain II DKE48_001745 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 DKE48_001745 IPR009051 Alpha-helical ferredoxin DKE48_001755 IPR023353 LemA-like domain superfamily DKE48_001755 IPR007156 LemA DKE48_001770 IPR012902 Prokaryotic N-terminal methylation site DKE48_001770 IPR001082 Fimbrial protein pilin DKE48_001780 IPR007016 O-antigen ligase-related DKE48_001780 IPR031726 Protein glycosylation ligase domain DKE48_001780 IPR021797 Virulence factor membrane-bound polymerase, C-terminal DKE48_001795 IPR008331 Ferritin/DPS protein domain DKE48_001795 IPR009078 Ferritin-like superfamily DKE48_001795 IPR009040 Ferritin-like diiron domain DKE48_001795 IPR002024 Bacterioferritin DKE48_001795 IPR012347 Ferritin-like DKE48_001800 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DKE48_001800 IPR007419 BFD-like [2Fe-2S]-binding domain DKE48_001805 IPR006056 RidA family DKE48_001805 IPR019897 RidA, conserved site DKE48_001805 IPR035959 RutC-like superfamily DKE48_001805 IPR006175 YjgF/YER057c/UK114 family DKE48_001820 IPR036161 RPB6/omega subunit-like superfamily DKE48_001820 IPR012293 RNA polymerase subunit, RPB6/omega DKE48_001820 IPR006110 RNA polymerase, subunit omega/K/RPB6 DKE48_001820 IPR003716 DNA-directed RNA polymerase, omega subunit DKE48_001830 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase DKE48_001870 IPR001082 Fimbrial protein pilin DKE48_001870 IPR012902 Prokaryotic N-terminal methylation site DKE48_001875 IPR023803 Ribosomal protein S16 domain superfamily DKE48_001875 IPR020592 Ribosomal protein S16, conserved site DKE48_001875 IPR000307 Ribosomal protein S16 DKE48_001880 IPR009000 Translation protein, beta-barrel domain superfamily DKE48_001880 IPR036976 RimM, N-terminal domain superfamily DKE48_001880 IPR002676 RimM, N-terminal DKE48_001880 IPR011033 PRC-barrel-like superfamily DKE48_001880 IPR027275 PRC-barrel domain DKE48_001880 IPR011961 16S rRNA processing protein RimM DKE48_001890 IPR001857 Ribosomal protein L19 DKE48_001890 IPR038657 Ribosomal protein L19 superfamily DKE48_001890 IPR018257 Ribosomal protein L19, conserved site DKE48_001890 IPR008991 Translation protein SH3-like domain superfamily DKE48_001900 IPR004961 Lipase chaperone DKE48_001935 IPR016166 FAD-binding domain, PCMH-type DKE48_001935 IPR004113 FAD-linked oxidase, C-terminal DKE48_001935 IPR036318 FAD-binding, type PCMH-like superfamily DKE48_001935 IPR016164 FAD-linked oxidase-like, C-terminal DKE48_001935 IPR004490 Glycolate oxidase subunit GlcD DKE48_001935 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DKE48_001935 IPR006094 FAD linked oxidase, N-terminal DKE48_001950 IPR011008 Dimeric alpha-beta barrel DKE48_001950 IPR007138 Antibiotic biosynthesis monooxygenase domain DKE48_001955 IPR003680 Flavodoxin-like fold DKE48_001955 IPR029039 Flavoprotein-like superfamily DKE48_001970 IPR010019 Integral membrane protein, YccS DKE48_001970 IPR010020 Integral membrane protein, YccS/YhfK DKE48_001970 IPR032692 Integral membrane protein YccS, N-terminal DKE48_002035 IPR004636 Acetylornithine/Succinylornithine transaminase family DKE48_002035 IPR005814 Aminotransferase class-III DKE48_002035 IPR015424 Pyridoxal phosphate-dependent transferase DKE48_002035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE48_002035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE48_002035 IPR026330 Succinylornithine transaminase DKE48_002035 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria DKE48_002055 IPR016681 Succinylglutamate desuccinylase DKE48_002055 IPR007036 Succinylglutamate desuccinylase/aspartoacylase DKE48_002085 IPR036390 Winged helix DNA-binding domain superfamily DKE48_002085 IPR000847 Transcription regulator HTH, LysR DKE48_002085 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_002085 IPR005119 LysR, substrate-binding DKE48_002105 IPR002310 Glycine-tRNA ligase, alpha subunit DKE48_002105 IPR006194 Glycine-tRNA synthetase, heterodimeric DKE48_002135 IPR007168 Phage shock protein, PspC, N-terminal DKE48_002155 IPR036291 NAD(P)-binding domain superfamily DKE48_002155 IPR041121 SDH, C-terminal DKE48_002155 IPR022893 Shikimate dehydrogenase family DKE48_002155 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DKE48_002155 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal DKE48_002155 IPR011342 Shikimate dehydrogenase DKE48_002170 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DKE48_002170 IPR033248 Transketolase, C-terminal domain DKE48_002170 IPR005475 Transketolase-like, pyrimidine-binding domain DKE48_002170 IPR029061 Thiamin diphosphate-binding fold DKE48_002170 IPR005477 Deoxyxylulose-5-phosphate synthase DKE48_002170 IPR020826 Transketolase binding site DKE48_002175 IPR033942 Inositol monophosphatase DKE48_002175 IPR020583 Inositol monophosphatase, metal-binding site DKE48_002175 IPR000760 Inositol monophosphatase-like DKE48_002175 IPR020550 Inositol monophosphatase, conserved site DKE48_002175 IPR022337 Inositol monophosphatase, SuhB DKE48_002185 IPR017871 ABC transporter, conserved site DKE48_002185 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl DKE48_002185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_002185 IPR003593 AAA+ ATPase domain DKE48_002185 IPR003439 ABC transporter-like DKE48_002190 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DKE48_002190 IPR030802 ABC transporter permease MalE DKE48_002215 IPR031100 LOG family DKE48_002215 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DKE48_002220 IPR000086 NUDIX hydrolase domain DKE48_002220 IPR020084 NUDIX hydrolase, conserved site DKE48_002220 IPR015797 NUDIX hydrolase-like domain superfamily DKE48_002220 IPR020476 NUDIX hydrolase DKE48_002225 IPR000836 Phosphoribosyltransferase domain DKE48_002225 IPR005222 Competence protein ComF DKE48_002225 IPR029057 Phosphoribosyltransferase-like DKE48_002240 IPR038404 TRAP transporter solute receptor DctP superfamily DKE48_002245 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase DKE48_002245 IPR041728 GPAT/DHAPAT, acyltransferase domain DKE48_002245 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB DKE48_002245 IPR002123 Phospholipid/glycerol acyltransferase DKE48_002250 IPR003703 Acyl-CoA thioesterase DKE48_002250 IPR029069 HotDog domain superfamily DKE48_002270 IPR030489 Transcription regulator Rrf2-type, conserved site DKE48_002270 IPR023761 Transcriptional repressor HTH, NsrR DKE48_002270 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_002270 IPR036390 Winged helix DNA-binding domain superfamily DKE48_002270 IPR000944 Transcription regulator Rrf2-type DKE48_002275 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DKE48_002275 IPR017927 FAD-binding domain, ferredoxin reductase-type DKE48_002275 IPR001433 Oxidoreductase FAD/NAD(P)-binding DKE48_002275 IPR017938 Riboflavin synthase-like beta-barrel DKE48_002275 IPR000971 Globin DKE48_002275 IPR023950 Flavohemoprotein DKE48_002275 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DKE48_002275 IPR012292 Globin/Protoglobin DKE48_002275 IPR009050 Globin-like superfamily DKE48_002295 IPR036838 Ribosomal protein S10 domain superfamily DKE48_002295 IPR027486 Ribosomal protein S10 domain DKE48_002295 IPR018268 Ribosomal protein S10, conserved site DKE48_002295 IPR001848 Ribosomal protein S10 DKE48_002305 IPR023574 Ribosomal protein L4 domain superfamily DKE48_002305 IPR013005 50S ribosomal protein uL4 DKE48_002305 IPR002136 Ribosomal protein L4/L1e DKE48_002310 IPR013025 Ribosomal protein L25/L23 DKE48_002310 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DKE48_002310 IPR012678 Ribosomal protein L23/L15e core domain superfamily DKE48_002315 IPR014722 Ribosomal protein L2, domain 2 DKE48_002315 IPR012340 Nucleic acid-binding, OB-fold DKE48_002315 IPR022666 Ribosomal Proteins L2, RNA binding domain DKE48_002315 IPR002171 Ribosomal protein L2 DKE48_002315 IPR022669 Ribosomal protein L2, C-terminal DKE48_002315 IPR014726 Ribosomal protein L2, domain 3 DKE48_002315 IPR008991 Translation protein SH3-like domain superfamily DKE48_002315 IPR005880 Ribosomal protein L2, bacterial/organellar-type DKE48_002320 IPR023575 Ribosomal protein S19, superfamily DKE48_002320 IPR002222 Ribosomal protein S19/S15 DKE48_002320 IPR005732 Ribosomal protein S19, bacterial-type DKE48_002320 IPR020934 Ribosomal protein S19 conserved site DKE48_002325 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type DKE48_002325 IPR036394 Ribosomal protein L22/L17 superfamily DKE48_002325 IPR018260 Ribosomal protein L22/L17, conserved site DKE48_002325 IPR001063 Ribosomal protein L22/L17 DKE48_002335 IPR016180 Ribosomal protein L10e/L16 DKE48_002335 IPR036920 Ribosomal protein L10e/L16 superfamily DKE48_002335 IPR020798 Ribosomal protein L16, conserved site DKE48_002335 IPR000114 Ribosomal protein L16 DKE48_002340 IPR036049 Ribosomal protein L29/L35 superfamily DKE48_002340 IPR001854 Ribosomal protein L29/L35 DKE48_002345 IPR019979 Ribosomal protein S17, conserved site DKE48_002345 IPR012340 Nucleic acid-binding, OB-fold DKE48_002345 IPR019984 30S ribosomal protein S17 DKE48_002345 IPR000266 Ribosomal protein S17/S11 DKE48_002355 IPR014722 Ribosomal protein L2, domain 2 DKE48_002355 IPR041988 Ribosomal Protein L26/L24, KOW domain DKE48_002355 IPR003256 Ribosomal protein L24 DKE48_002355 IPR005825 Ribosomal protein L24/L26, conserved site DKE48_002355 IPR008991 Translation protein SH3-like domain superfamily DKE48_002355 IPR005824 KOW DKE48_002365 IPR001209 Ribosomal protein S14 DKE48_002365 IPR023036 Ribosomal protein S14, bacterial/plastid DKE48_002365 IPR018271 Ribosomal protein S14, conserved site DKE48_002370 IPR000630 Ribosomal protein S8 DKE48_002370 IPR035987 Ribosomal protein S8 superfamily DKE48_002375 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily DKE48_002375 IPR000702 Ribosomal protein L6 DKE48_002375 IPR020040 Ribosomal protein L6, alpha-beta domain DKE48_002375 IPR019906 Ribosomal protein L6, bacterial-type DKE48_002375 IPR002358 Ribosomal protein L6, conserved site DKE48_002380 IPR004389 Ribosomal protein L18, bacterial-type DKE48_002380 IPR005484 Ribosomal protein L18 DKE48_002390 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DKE48_002390 IPR005996 Ribosomal protein L30, bacterial-type DKE48_002390 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DKE48_002395 IPR001196 Ribosomal protein L15, conserved site DKE48_002395 IPR030878 Ribosomal protein L15 DKE48_002395 IPR036227 Ribosomal L18e/L15P superfamily DKE48_002395 IPR021131 Ribosomal protein L18e/L15P DKE48_002395 IPR005749 Ribosomal protein L15, bacterial-type DKE48_002400 IPR002208 SecY/SEC61-alpha family DKE48_002400 IPR026593 Protein translocase subunit SecY DKE48_002400 IPR023201 SecY domain superfamily DKE48_002400 IPR030659 SecY conserved site DKE48_002405 IPR000473 Ribosomal protein L36 DKE48_002405 IPR035977 Ribosomal protein L36 superfamily DKE48_002410 IPR027437 30s ribosomal protein S13, C-terminal DKE48_002410 IPR001892 Ribosomal protein S13 DKE48_002410 IPR010979 Ribosomal protein S13-like, H2TH DKE48_002410 IPR019980 Ribosomal protein S13, bacterial-type DKE48_002410 IPR018269 Ribosomal protein S13, conserved site DKE48_002445 IPR036714 Flavinator of succinate dehydrogenase superfamily DKE48_002445 IPR005631 Flavinator of succinate dehydrogenase DKE48_002480 IPR012658 Conserved hypothetical protein CHP02443 DKE48_002535 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DKE48_002535 IPR011234 Fumarylacetoacetase-like, C-terminal DKE48_002555 IPR029039 Flavoprotein-like superfamily DKE48_002555 IPR005025 NADPH-dependent FMN reductase-like DKE48_002555 IPR010089 Flavoprotein WrbA-like DKE48_002555 IPR008254 Flavodoxin/nitric oxide synthase DKE48_002555 IPR001226 Flavodoxin, conserved site DKE48_002595 IPR023346 Lysozyme-like domain superfamily DKE48_002595 IPR011055 Duplicated hybrid motif DKE48_002595 IPR008258 Transglycosylase SLT domain 1 DKE48_002595 IPR000189 Prokaryotic transglycosylase, active site DKE48_002595 IPR010090 Phage tail tape measure protein DKE48_002595 IPR016047 Peptidase M23 DKE48_002605 IPR036291 NAD(P)-binding domain superfamily DKE48_002605 IPR010945 Malate dehydrogenase, type 2 DKE48_002605 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal DKE48_002605 IPR001236 Lactate/malate dehydrogenase, N-terminal DKE48_002605 IPR022383 Lactate/malate dehydrogenase, C-terminal DKE48_002605 IPR001557 L-lactate/malate dehydrogenase DKE48_002635 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase DKE48_002635 IPR000462 CDP-alcohol phosphatidyltransferase DKE48_002710 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_002710 IPR036291 NAD(P)-binding domain superfamily DKE48_002760 IPR007481 Stringent starvation protein B DKE48_002760 IPR036760 SspB-like superfamily DKE48_002765 IPR004046 Glutathione S-transferase, C-terminal DKE48_002765 IPR004045 Glutathione S-transferase, N-terminal DKE48_002765 IPR040079 Glutathione Transferase family DKE48_002765 IPR034341 Stringent starvation protein A, N-terminal DKE48_002765 IPR010987 Glutathione S-transferase, C-terminal-like DKE48_002765 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DKE48_002765 IPR036249 Thioredoxin-like superfamily DKE48_002770 IPR020568 Ribosomal protein S5 domain 2-type fold DKE48_002770 IPR020574 Ribosomal protein S9, conserved site DKE48_002770 IPR023035 Ribosomal protein S9, bacterial/plastid DKE48_002770 IPR000754 Ribosomal protein S9 DKE48_002770 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKE48_002785 IPR011530 Ribosomal RNA adenine dimethylase DKE48_002785 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal DKE48_002785 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site DKE48_002785 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DKE48_002785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_002785 IPR023165 rRNA adenine dimethylase-like DKE48_002830 IPR000498 Outer membrane protein OmpA-like, transmembrane domain DKE48_002830 IPR036737 OmpA-like domain superfamily DKE48_002830 IPR006665 OmpA-like domain DKE48_002830 IPR006690 Outer membrane protein, OmpA-like, conserved site DKE48_002830 IPR006664 Outer membrane protein, bacterial DKE48_002830 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DKE48_002830 IPR002368 Outer membrane protein, OmpA DKE48_002840 IPR025293 YfiR/HmsC-like DKE48_002880 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE48_002880 IPR029021 Protein-tyrosine phosphatase-like DKE48_002880 IPR001279 Metallo-beta-lactamase DKE48_002880 IPR005939 Beta-lactamase hydrolase-like DKE48_002890 IPR005746 Thioredoxin DKE48_002890 IPR036249 Thioredoxin-like superfamily DKE48_002890 IPR017937 Thioredoxin, conserved site DKE48_002890 IPR013766 Thioredoxin domain DKE48_002895 IPR029069 HotDog domain superfamily DKE48_002895 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain DKE48_002895 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase DKE48_002895 IPR006683 Thioesterase domain DKE48_002920 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal DKE48_002920 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC DKE48_002920 IPR008471 MnmC-like methyltransferase DKE48_002920 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_002920 IPR006076 FAD dependent oxidoreductase DKE48_002930 IPR011008 Dimeric alpha-beta barrel DKE48_002930 IPR005545 YCII-related DKE48_002935 IPR006008 Intracellular septation protein A DKE48_002950 IPR037518 MPN domain DKE48_002950 IPR025657 RadC-like JAB domain DKE48_002950 IPR001405 Uncharacterised protein family UPF0758 DKE48_002950 IPR010994 RuvA domain 2-like DKE48_002960 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DKE48_002960 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DKE48_002960 IPR005665 Protein-export membrane protein SecF, bacterial DKE48_002960 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DKE48_002970 IPR003849 Preprotein translocase YajC DKE48_003015 IPR001544 Aminotransferase class IV DKE48_003015 IPR036038 Aminotransferase-like, PLP-dependent enzymes DKE48_003015 IPR005785 Branched-chain amino acid aminotransferase I DKE48_003015 IPR033939 Branched-chain aminotransferase DKE48_003015 IPR018300 Aminotransferase, class IV, conserved site DKE48_003025 IPR040423 Phosphoethanolamine transferase DKE48_003025 IPR000917 Sulfatase, N-terminal DKE48_003025 IPR017850 Alkaline-phosphatase-like, core domain superfamily DKE48_003045 IPR001296 Glycosyl transferase, family 1 DKE48_003045 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DKE48_003120 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE48_003120 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE48_003120 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DKE48_003120 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE48_003120 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE48_003120 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE48_003120 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE48_003140 IPR003846 Protein adenylyltransferase SelO DKE48_003170 IPR011060 Ribulose-phosphate binding barrel DKE48_003170 IPR013785 Aldolase-type TIM barrel DKE48_003170 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) DKE48_003175 IPR023026 Tryptophan synthase beta chain/beta chain-like DKE48_003175 IPR001926 Pyridoxal-phosphate dependent enzyme DKE48_003175 IPR006653 Tryptophan synthase, beta chain, conserved site DKE48_003175 IPR006654 Tryptophan synthase, beta chain DKE48_003175 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DKE48_003210 IPR001645 Folylpolyglutamate synthetase DKE48_003210 IPR013221 Mur ligase, central DKE48_003210 IPR018109 Folylpolyglutamate synthetase, conserved site DKE48_003210 IPR036565 Mur-like, catalytic domain superfamily DKE48_003210 IPR004101 Mur ligase, C-terminal DKE48_003210 IPR036615 Mur ligase, C-terminal domain superfamily DKE48_003225 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE48_003225 IPR001279 Metallo-beta-lactamase DKE48_003245 IPR011701 Major facilitator superfamily DKE48_003245 IPR005828 Major facilitator, sugar transporter-like DKE48_003245 IPR004736 MFS transporter, metabolite:H symporter DKE48_003245 IPR036259 MFS transporter superfamily DKE48_003245 IPR020846 Major facilitator superfamily domain DKE48_003245 IPR005829 Sugar transporter, conserved site DKE48_003285 IPR018060 DNA binding HTH domain, AraC-type DKE48_003285 IPR018062 HTH domain AraC-type, conserved site DKE48_003285 IPR037923 Transcription regulator HTH-like DKE48_003285 IPR009057 Homeobox-like domain superfamily DKE48_003285 IPR003313 AraC-type arabinose-binding/dimerisation domain DKE48_003285 IPR020449 Transcription regulator HTH, AraC- type DKE48_003290 IPR003673 CoA-transferase family III DKE48_003290 IPR023606 CoA-transferase family III domain superfamily DKE48_003315 IPR000390 Small multidrug resistance protein family DKE48_003325 IPR020616 Thiolase, N-terminal DKE48_003325 IPR020613 Thiolase, conserved site DKE48_003325 IPR020615 Thiolase, acyl-enzyme intermediate active site DKE48_003325 IPR020610 Thiolase, active site DKE48_003325 IPR020617 Thiolase, C-terminal DKE48_003325 IPR016039 Thiolase-like DKE48_003325 IPR002155 Thiolase DKE48_003340 IPR001233 tRNA-splicing ligase, RtcB DKE48_003340 IPR036025 tRNA-splicing ligase RtcB-like superfamily DKE48_003345 IPR004841 Amino acid permease/ SLC12A domain DKE48_003345 IPR004840 Amino acid permease, conserved site DKE48_003350 IPR013675 Methyltransferase small, N-terminal DKE48_003350 IPR023543 rRNA small subunit methyltransferase C DKE48_003350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_003350 IPR007848 Methyltransferase small domain DKE48_003350 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DKE48_003365 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DKE48_003365 IPR001185 Large-conductance mechanosensitive channel DKE48_003365 IPR019823 Large-conductance mechanosensitive channel, conserved site DKE48_003365 IPR036019 Gated mechanosensitive channel DKE48_003420 IPR017703 YgfZ/GcvT conserved site DKE48_003420 IPR006222 Aminomethyltransferase, folate-binding domain DKE48_003420 IPR028896 Aminomethyltransferase-like DKE48_003420 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DKE48_003435 IPR013988 PhnA protein, C-terminal DKE48_003435 IPR013987 PhnA protein, N-terminal DKE48_003435 IPR004624 PhnA protein DKE48_003470 IPR001789 Signal transduction response regulator, receiver domain DKE48_003470 IPR011006 CheY-like superfamily DKE48_003480 IPR004090 Chemotaxis methyl-accepting receptor DKE48_003480 IPR003660 HAMP domain DKE48_003480 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE48_003480 IPR029095 NarX-like, N-terminal DKE48_003510 IPR007401 Protein of unknown function DUF454 DKE48_003515 IPR038063 L,D-transpeptidase catalytic domain-like DKE48_003515 IPR041597 L,D-transpeptidase C-terminal domain DKE48_003515 IPR005490 L,D-transpeptidase catalytic domain DKE48_003575 IPR000415 Nitroreductase-like DKE48_003575 IPR029479 Nitroreductase DKE48_003645 IPR003837 Glu-tRNAGln amidotransferase C subunit DKE48_003645 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C DKE48_003650 IPR004753 Cell shape determining protein MreB DKE48_003655 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 DKE48_003655 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 DKE48_003655 IPR007221 Rod shape-determining protein MreC DKE48_003665 IPR029001 Inosine triphosphate pyrophosphatase-like DKE48_003665 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DKE48_003680 IPR004255 O-acyltransferase, WSD1, N-terminal DKE48_003680 IPR009721 O-acyltransferase WSD1, C-terminal DKE48_003680 IPR014292 Acyltransferase, WS/DGAT/MGAT DKE48_003690 IPR036412 HAD-like superfamily DKE48_003690 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein DKE48_003690 IPR023214 HAD superfamily DKE48_003700 IPR003680 Flavodoxin-like fold DKE48_003700 IPR029039 Flavoprotein-like superfamily DKE48_003720 IPR003824 Undecaprenyl-diphosphatase UppP DKE48_003760 IPR015376 Zinc ribbon, NADH pyrophosphatase DKE48_003760 IPR015797 NUDIX hydrolase-like domain superfamily DKE48_003760 IPR022925 NADH pyrophosphatase NudC DKE48_003760 IPR000086 NUDIX hydrolase domain DKE48_003770 IPR012709 2-methyl-aconitate isomerase PrpF DKE48_003770 IPR007400 PrpF protein DKE48_003775 IPR008949 Isoprenoid synthase domain superfamily DKE48_003775 IPR000092 Polyprenyl synthetase DKE48_003775 IPR033749 Polyprenyl synthetase, conserved site DKE48_003780 IPR038056 YjbR-like superfamily DKE48_003780 IPR007351 Uncharacterised protein YjbR DKE48_003785 IPR018080 Band 7/stomatin-like, conserved site DKE48_003785 IPR036013 Band 7/SPFH domain superfamily DKE48_003785 IPR001107 Band 7 domain DKE48_003785 IPR001972 Stomatin family DKE48_003795 IPR002641 Patatin-like phospholipase domain DKE48_003795 IPR001423 Lysophospholipase patatin, conserved site DKE48_003795 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DKE48_003825 IPR001789 Signal transduction response regulator, receiver domain DKE48_003825 IPR039420 Transcriptional regulatory protein WalR-like DKE48_003825 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_003825 IPR011006 CheY-like superfamily DKE48_003825 IPR001867 OmpR/PhoB-type DNA-binding domain DKE48_003895 IPR035439 UPF0145 domain superfamily DKE48_003895 IPR002765 Uncharacterised protein family UPF0145 DKE48_003900 IPR035439 UPF0145 domain superfamily DKE48_003900 IPR002765 Uncharacterised protein family UPF0145 DKE48_003910 IPR001036 Acriflavin resistance protein DKE48_003910 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DKE48_003910 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DKE48_003915 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DKE48_003915 IPR006143 RND efflux pump, membrane fusion protein DKE48_003940 IPR001787 Ribosomal protein L21 DKE48_003940 IPR018258 Ribosomal protein L21, conserved site DKE48_003940 IPR036164 L21-like superfamily DKE48_003940 IPR028909 Ribosomal protein L21-like DKE48_003970 IPR029028 Alpha/beta knot methyltransferases DKE48_003970 IPR001537 tRNA/rRNA methyltransferase, SpoU type DKE48_003970 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase DKE48_003970 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKE48_003980 IPR008254 Flavodoxin/nitric oxide synthase DKE48_003980 IPR029039 Flavoprotein-like superfamily DKE48_003980 IPR005025 NADPH-dependent FMN reductase-like DKE48_004005 IPR027471 YbeD-like domain superfamily DKE48_004005 IPR007454 Uncharacterised protein family UPF0250 DKE48_004035 IPR016143 Citrate synthase-like, small alpha subdomain DKE48_004035 IPR036969 Citrate synthase superfamily DKE48_004035 IPR016142 Citrate synthase-like, large alpha subdomain DKE48_004035 IPR002020 Citrate synthase DKE48_004035 IPR019810 Citrate synthase active site DKE48_004035 IPR010953 Citrate synthase, type I DKE48_004035 IPR024176 Citrate synthase, bacterial-type DKE48_004045 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DKE48_004045 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit DKE48_004045 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit DKE48_004045 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site DKE48_004050 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DKE48_004050 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit DKE48_004050 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor DKE48_004055 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DKE48_004055 IPR011281 Succinate dehydrogenase, flavoprotein subunit DKE48_004055 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DKE48_004055 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_004055 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site DKE48_004055 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily DKE48_004055 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal DKE48_004055 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit DKE48_004095 IPR016102 Succinyl-CoA synthetase-like DKE48_004095 IPR036291 NAD(P)-binding domain superfamily DKE48_004095 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DKE48_004095 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DKE48_004095 IPR003781 CoA-binding DKE48_004095 IPR005810 Succinyl-CoA ligase, alpha subunit DKE48_004095 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DKE48_004100 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE48_004100 IPR024109 Tryptophan-tRNA ligase, bacterial-type DKE48_004100 IPR002306 Tryptophan-tRNA ligase DKE48_004100 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_004100 IPR002305 Aminoacyl-tRNA synthetase, class Ic DKE48_004105 IPR008526 Inner membrane protein YedI DKE48_004110 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative DKE48_004185 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DKE48_004185 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DKE48_004185 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_004195 IPR006015 Universal stress protein A family DKE48_004195 IPR006016 UspA DKE48_004195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_004205 IPR035959 RutC-like superfamily DKE48_004205 IPR006175 YjgF/YER057c/UK114 family DKE48_004205 IPR038743 YjgH-like DKE48_004245 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_004245 IPR015507 Ribosomal RNA large subunit methyltransferase E DKE48_004245 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DKE48_004295 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DKE48_004295 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site DKE48_004295 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DKE48_004295 IPR036291 NAD(P)-binding domain superfamily DKE48_004295 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase DKE48_004375 IPR001915 Peptidase M48 DKE48_004375 IPR022919 Peptidase M48, protease HtpX, putative DKE48_004400 IPR008258 Transglycosylase SLT domain 1 DKE48_004400 IPR023703 Membrane-bound lytic murein transglycosylase F DKE48_004400 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKE48_004400 IPR023346 Lysozyme-like domain superfamily DKE48_004400 IPR000189 Prokaryotic transglycosylase, active site DKE48_004470 IPR009057 Homeobox-like domain superfamily DKE48_004470 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE48_004470 IPR001647 DNA-binding HTH domain, TetR-type DKE48_004490 IPR036291 NAD(P)-binding domain superfamily DKE48_004490 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_004490 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_004500 IPR006143 RND efflux pump, membrane fusion protein DKE48_004500 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DKE48_004510 IPR000415 Nitroreductase-like DKE48_004510 IPR029479 Nitroreductase DKE48_004535 IPR003786 Sulfur carrier protein FdhD DKE48_004535 IPR016193 Cytidine deaminase-like DKE48_004550 IPR006195 Aminoacyl-tRNA synthetase, class II DKE48_004550 IPR004525 Elongation factor P--(R)-beta-lysine ligase DKE48_004550 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal DKE48_004550 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DKE48_004560 IPR020568 Ribosomal protein S5 domain 2-type fold DKE48_004560 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_004560 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DKE48_004560 IPR004504 DNA repair protein RadA DKE48_004560 IPR003593 AAA+ ATPase domain DKE48_004560 IPR041166 LapB, rubredoxin metal binding domain DKE48_004560 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKE48_004570 IPR004841 Amino acid permease/ SLC12A domain DKE48_004570 IPR004840 Amino acid permease, conserved site DKE48_004585 IPR018510 Diaminopimelate epimerase, active site DKE48_004585 IPR001653 Diaminopimelate epimerase, DapF DKE48_004595 IPR001123 Amino acid exporter protein, LeuE-type DKE48_004595 IPR004778 Homoserine/Threonine efflux protein DKE48_004610 IPR001308 Electron transfer flavoprotein alpha subunit/FixB DKE48_004610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_004610 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site DKE48_004610 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal DKE48_004610 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal DKE48_004610 IPR029035 DHS-like NAD/FAD-binding domain superfamily DKE48_004610 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DKE48_004695 IPR003593 AAA+ ATPase domain DKE48_004695 IPR003439 ABC transporter-like DKE48_004695 IPR017871 ABC transporter, conserved site DKE48_004695 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_004695 IPR015854 ABC transporter, lipoprotein release, LolD DKE48_004720 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DKE48_004720 IPR036477 Formyl transferase, N-terminal domain superfamily DKE48_004720 IPR004607 Phosphoribosylglycinamide formyltransferase DKE48_004720 IPR002376 Formyl transferase, N-terminal DKE48_004725 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase DKE48_004725 IPR010918 PurM-like, C-terminal domain DKE48_004725 IPR036676 PurM-like, C-terminal domain superfamily DKE48_004725 IPR016188 PurM-like, N-terminal domain DKE48_004725 IPR036921 PurM-like, N-terminal domain superfamily DKE48_004730 IPR002549 Transmembrane protein TqsA-like DKE48_004735 IPR018312 Chromosomal replication control, initiator DnaA, conserved site DKE48_004735 IPR024633 DnaA N-terminal domain DKE48_004735 IPR038454 DnaA, N-terminal domain superfamily DKE48_004735 IPR020591 Chromosomal replication control, initiator DnaA-like DKE48_004735 IPR003593 AAA+ ATPase domain DKE48_004735 IPR013317 Chromosomal replication initiator protein DnaA DKE48_004735 IPR001957 Chromosomal replication control, initiator DnaA DKE48_004735 IPR010921 Trp repressor/replication initiator DKE48_004735 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_004735 IPR013159 Chromosomal replication initiator, DnaA C-terminal DKE48_004780 IPR006664 Outer membrane protein, bacterial DKE48_004780 IPR006665 OmpA-like domain DKE48_004780 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal DKE48_004780 IPR006690 Outer membrane protein, OmpA-like, conserved site DKE48_004780 IPR036737 OmpA-like domain superfamily DKE48_004780 IPR039001 Peptidoglycan-associated lipoprotein DKE48_004795 IPR003400 Biopolymer transport protein ExbD/TolR DKE48_004795 IPR014168 Tol-Pal system protein TolR DKE48_004805 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family DKE48_004805 IPR029069 HotDog domain superfamily DKE48_004805 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase DKE48_004805 IPR006683 Thioesterase domain DKE48_004805 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site DKE48_004815 IPR004605 DNA helicase, Holliday junction RuvB-type DKE48_004815 IPR041445 RuvB, AAA lid domain DKE48_004815 IPR008823 RuvB C-terminal winged helix domain DKE48_004815 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_004815 IPR003593 AAA+ ATPase domain DKE48_004815 IPR036390 Winged helix DNA-binding domain superfamily DKE48_004815 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_004815 IPR008824 RuvB-like P-loop domain DKE48_004840 IPR036259 MFS transporter superfamily DKE48_004840 IPR020846 Major facilitator superfamily domain DKE48_004840 IPR004812 Drug resistance transporter Bcr/CmlA subfamily DKE48_004840 IPR011701 Major facilitator superfamily DKE48_004860 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DKE48_004860 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DKE48_004860 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria DKE48_004860 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DKE48_004865 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB DKE48_004865 IPR014748 Enoyl-CoA hydratase, C-terminal DKE48_004865 IPR001753 Enoyl-CoA hydratase/isomerase DKE48_004865 IPR029045 ClpP/crotonase-like domain superfamily DKE48_004905 IPR007197 Radical SAM DKE48_004905 IPR013785 Aldolase-type TIM barrel DKE48_004905 IPR024924 7-carboxy-7-deazaguanine synthase-like DKE48_004920 IPR036390 Winged helix DNA-binding domain superfamily DKE48_004920 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_004920 IPR000847 Transcription regulator HTH, LysR DKE48_004920 IPR005119 LysR, substrate-binding DKE48_004920 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain DKE48_004925 IPR003439 ABC transporter-like DKE48_004925 IPR017871 ABC transporter, conserved site DKE48_004925 IPR024765 TOBE-like domain DKE48_004925 IPR008995 Molybdate/tungstate binding, C-terminal DKE48_004925 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal DKE48_004925 IPR003593 AAA+ ATPase domain DKE48_004925 IPR005666 Sulphate transport system permease protein 1 DKE48_004925 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_004930 IPR011866 Sulphate ABC transporter, permease protein CysW DKE48_004930 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE48_004930 IPR035906 MetI-like superfamily DKE48_004930 IPR005667 Sulphate ABC transporter permease protein 2 DKE48_004935 IPR005667 Sulphate ABC transporter permease protein 2 DKE48_004935 IPR035906 MetI-like superfamily DKE48_004935 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE48_004935 IPR011865 Sulphate ABC transporter, permease protein CysT DKE48_004960 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_004960 IPR039430 Thymidylate kinase-like domain DKE48_004960 IPR018094 Thymidylate kinase DKE48_005005 IPR000999 Ribonuclease III domain DKE48_005005 IPR011907 Ribonuclease III DKE48_005005 IPR014720 Double-stranded RNA-binding domain DKE48_005005 IPR036389 Ribonuclease III, endonuclease domain superfamily DKE48_005010 IPR004044 K Homology domain, type 2 DKE48_005010 IPR009019 K homology domain superfamily, prokaryotic type DKE48_005010 IPR006073 GTP binding domain DKE48_005010 IPR015946 K homology domain-like, alpha/beta DKE48_005010 IPR005225 Small GTP-binding protein domain DKE48_005010 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_005010 IPR005662 GTP-binding protein Era DKE48_005010 IPR030388 Era-type guanine nucleotide-binding (G) domain DKE48_005025 IPR036130 Pyridoxine 5'-phosphate synthase DKE48_005025 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ DKE48_005025 IPR013785 Aldolase-type TIM barrel DKE48_005080 IPR006935 Helicase/UvrB, N-terminal DKE48_005080 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKE48_005080 IPR001650 Helicase, C-terminal DKE48_005080 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_005080 IPR041471 UvrB, interaction domain DKE48_005080 IPR024759 UvrB, YAD/RRR-motif-containing domain DKE48_005080 IPR001943 UVR domain DKE48_005080 IPR036876 UVR domain superfamily DKE48_005080 IPR004807 UvrABC system, subunit B DKE48_005090 IPR004626 RarD protein DKE48_005095 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family DKE48_005095 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site DKE48_005095 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain DKE48_005095 IPR036291 NAD(P)-binding domain superfamily DKE48_005095 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I DKE48_005095 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain DKE48_005115 IPR001057 Glutamate/acetylglutamate kinase DKE48_005115 IPR036974 PUA domain superfamily DKE48_005115 IPR041739 Glutamate-5-kinase domain DKE48_005115 IPR001048 Aspartate/glutamate/uridylate kinase DKE48_005115 IPR036393 Acetylglutamate kinase-like superfamily DKE48_005115 IPR011529 Glutamate 5-kinase DKE48_005115 IPR015947 PUA-like superfamily DKE48_005115 IPR002478 PUA domain DKE48_005115 IPR019797 Glutamate 5-kinase, conserved site DKE48_005115 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase DKE48_005185 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DKE48_005190 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_005190 IPR023753 FAD/NAD(P)-binding domain DKE48_005195 IPR012338 Beta-lactamase/transpeptidase-like DKE48_005195 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DKE48_005195 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DKE48_005195 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DKE48_005195 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DKE48_005195 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DKE48_005210 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DKE48_005210 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DKE48_005210 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DKE48_005210 IPR006145 Pseudouridine synthase, RsuA/RluA DKE48_005210 IPR020103 Pseudouridine synthase, catalytic domain superfamily DKE48_005245 IPR003719 Phenazine biosynthesis PhzF protein DKE48_005285 IPR036206 Thiamin phosphate synthase superfamily DKE48_005285 IPR022998 Thiamine phosphate synthase/TenI DKE48_005285 IPR013785 Aldolase-type TIM barrel DKE48_005285 IPR034291 Thiamine phosphate synthase DKE48_005300 IPR020103 Pseudouridine synthase, catalytic domain superfamily DKE48_005300 IPR006145 Pseudouridine synthase, RsuA/RluA DKE48_005300 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DKE48_005415 IPR000362 Fumarate lyase family DKE48_005415 IPR022761 Fumarate lyase, N-terminal DKE48_005415 IPR008948 L-Aspartase-like DKE48_005415 IPR020557 Fumarate lyase, conserved site DKE48_005415 IPR024083 Fumarase/histidase, N-terminal DKE48_005415 IPR004769 Adenylosuccinate lyase DKE48_005415 IPR013539 Adenylosuccinate lyase PurB, C-terminal DKE48_005430 IPR020084 NUDIX hydrolase, conserved site DKE48_005430 IPR033713 Phosphatase NudJ DKE48_005430 IPR000086 NUDIX hydrolase domain DKE48_005430 IPR020476 NUDIX hydrolase DKE48_005430 IPR015797 NUDIX hydrolase-like domain superfamily DKE48_005435 IPR011004 Trimeric LpxA-like superfamily DKE48_005435 IPR001451 Hexapeptide repeat DKE48_005440 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DKE48_005440 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DKE48_005440 IPR012338 Beta-lactamase/transpeptidase-like DKE48_005440 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DKE48_005440 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DKE48_005440 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DKE48_005475 IPR011055 Duplicated hybrid motif DKE48_005475 IPR018392 LysM domain DKE48_005475 IPR036779 LysM domain superfamily DKE48_005475 IPR016047 Peptidase M23 DKE48_005480 IPR005119 LysR, substrate-binding DKE48_005480 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_005480 IPR000847 Transcription regulator HTH, LysR DKE48_005480 IPR036390 Winged helix DNA-binding domain superfamily DKE48_005495 IPR018146 Glyoxalase I, conserved site DKE48_005495 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DKE48_005495 IPR037523 Vicinal oxygen chelate (VOC) domain DKE48_005495 IPR004361 Glyoxalase I DKE48_005495 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DKE48_005505 IPR002150 Ribosomal protein L31 DKE48_005505 IPR027491 Ribosomal protein L31 type A DKE48_005505 IPR042105 Ribosomal protein L31 superfamily DKE48_005505 IPR034704 L28p-like DKE48_005535 IPR007423 Selenoprotein, putative DKE48_005605 IPR012093 Pirin DKE48_005605 IPR003829 Pirin, N-terminal domain DKE48_005605 IPR014710 RmlC-like jelly roll fold DKE48_005605 IPR011051 RmlC-like cupin domain superfamily DKE48_005605 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain DKE48_005670 IPR036063 Smr domain superfamily DKE48_005670 IPR022990 Uncharacterised protein family UPF0115 DKE48_005670 IPR002625 Smr domain DKE48_005675 IPR013785 Aldolase-type TIM barrel DKE48_005675 IPR013798 Indole-3-glycerol phosphate synthase DKE48_005675 IPR001468 Indole-3-glycerol phosphate synthase, conserved site DKE48_005675 IPR011060 Ribulose-phosphate binding barrel DKE48_005695 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DKE48_005695 IPR042097 Aminopeptidase N-like , N-terminal DKE48_005695 IPR014782 Peptidase M1, membrane alanine aminopeptidase DKE48_005695 IPR024571 ERAP1-like C-terminal domain DKE48_005695 IPR034016 Aminopeptidase N-type DKE48_005700 IPR029062 Class I glutamine amidotransferase-like DKE48_005700 IPR017926 Glutamine amidotransferase DKE48_005700 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain DKE48_005760 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily DKE48_005760 IPR001189 Manganese/iron superoxide dismutase DKE48_005760 IPR019833 Manganese/iron superoxide dismutase, binding site DKE48_005760 IPR019832 Manganese/iron superoxide dismutase, C-terminal DKE48_005760 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily DKE48_005760 IPR019831 Manganese/iron superoxide dismutase, N-terminal DKE48_005765 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DKE48_005765 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DKE48_005795 IPR015947 PUA-like superfamily DKE48_005795 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKE48_005795 IPR029028 Alpha/beta knot methyltransferases DKE48_005795 IPR006700 Ribosomal RNA small subunit methyltransferase E DKE48_005800 IPR004620 5,10-methylenetetrahydrofolate reductase DKE48_005800 IPR003171 Methylenetetrahydrofolate reductase DKE48_005800 IPR029041 FAD-linked oxidoreductase-like DKE48_005845 IPR004737 Nitrate transporter DKE48_005845 IPR020846 Major facilitator superfamily domain DKE48_005845 IPR011701 Major facilitator superfamily DKE48_005845 IPR036259 MFS transporter superfamily DKE48_005895 IPR034718 Endolytic peptidoglycan transglycosylase RlpA DKE48_005895 IPR009009 RlpA-like protein, double-psi beta-barrel domain DKE48_005895 IPR036908 RlpA-like domain superfamily DKE48_005895 IPR007730 Sporulation-like domain DKE48_005895 IPR012997 Rare lipoprotein A DKE48_005915 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal DKE48_005915 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF DKE48_005915 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 DKE48_005925 IPR003593 AAA+ ATPase domain DKE48_005925 IPR003439 ABC transporter-like DKE48_005925 IPR017871 ABC transporter, conserved site DKE48_005925 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_006265 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKE48_006265 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DKE48_006265 IPR018313 Solute-binding protein family 3, conserved site DKE48_006275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE48_006275 IPR035906 MetI-like superfamily DKE48_006275 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DKE48_006285 IPR000390 Small multidrug resistance protein family DKE48_006290 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DKE48_006290 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DKE48_006315 IPR023370 TrmO-like, N-terminal domain DKE48_006315 IPR041369 TrmO, C-terminal DKE48_006315 IPR023368 Uncharacterised protein family UPF0066, conserved site DKE48_006315 IPR040372 YaeB-like DKE48_006315 IPR036414 YaeB, N-terminal domain superfamily DKE48_006315 IPR036413 YaeB-like superfamily DKE48_006330 IPR036700 Bacterial OB-fold superfamily DKE48_006330 IPR005220 Bacterial OB-fold DKE48_006330 IPR016052 Bacteriophage 933W, L0136 DKE48_006365 IPR002504 NAD kinase DKE48_006365 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DKE48_006365 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal DKE48_006365 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal DKE48_006370 IPR009749 Protein of unknown function DUF1315 DKE48_006375 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DKE48_006375 IPR017459 Glycosyl transferase family 3, N-terminal domain DKE48_006375 IPR000312 Glycosyl transferase, family 3 DKE48_006375 IPR005940 Anthranilate phosphoribosyl transferase DKE48_006375 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DKE48_006390 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE48_006390 IPR006089 Acyl-CoA dehydrogenase, conserved site DKE48_006390 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE48_006390 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE48_006390 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE48_006390 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE48_006390 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE48_006405 IPR002701 Chorismate mutase II, prokaryotic-type DKE48_006405 IPR036263 Chorismate mutase type II superfamily DKE48_006405 IPR036979 Chorismate mutase domain superfamily DKE48_006405 IPR001086 Prephenate dehydratase DKE48_006405 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain DKE48_006405 IPR018528 Prephenate dehydratase, conserved site DKE48_006405 IPR002912 ACT domain DKE48_006405 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase DKE48_006420 IPR005532 Sulfatase-modifying factor enzyme DKE48_006420 IPR016187 C-type lectin fold DKE48_006420 IPR042095 Sulfatase-modifying factor enzyme superfamily DKE48_006445 IPR008867 Thiazole synthase DKE48_006445 IPR033983 Thiazole synthase ThiG DKE48_006445 IPR013785 Aldolase-type TIM barrel DKE48_006470 IPR012340 Nucleic acid-binding, OB-fold DKE48_006470 IPR012156 Cold shock, CspA DKE48_006470 IPR011129 Cold shock domain DKE48_006470 IPR019844 Cold-shock (CSD) domain DKE48_006470 IPR002059 Cold-shock protein, DNA-binding DKE48_006475 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DKE48_006475 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKE48_006475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_006475 IPR014014 RNA helicase, DEAD-box type, Q motif DKE48_006475 IPR001650 Helicase, C-terminal DKE48_006475 IPR023554 ATP-dependent RNA helicase RhlB type DKE48_006475 IPR011545 DEAD/DEAH box helicase domain DKE48_006485 IPR026021 Putative NAD(P)H nitroreductase YdjA-like DKE48_006485 IPR000415 Nitroreductase-like DKE48_006485 IPR029479 Nitroreductase DKE48_006490 IPR036291 NAD(P)-binding domain superfamily DKE48_006490 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DKE48_006490 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DKE48_006490 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent DKE48_006490 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal DKE48_006490 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal DKE48_006545 IPR019004 Uncharacterised protein YqeY/Aim41 DKE48_006545 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 DKE48_006545 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like DKE48_006545 IPR042184 YqeY/Aim41, N-terminal domain DKE48_006550 IPR038380 Ribosomal protein S21 superfamily DKE48_006550 IPR001911 Ribosomal protein S21 DKE48_006550 IPR018278 Ribosomal protein S21, conserved site DKE48_006610 IPR037891 Immunity protein Cdil-like superfamily DKE48_006610 IPR009888 Immunity protein CdiI, Proteobacteria type DKE48_006615 IPR009888 Immunity protein CdiI, Proteobacteria type DKE48_006615 IPR037891 Immunity protein Cdil-like superfamily DKE48_006645 IPR042080 RNA 2'-phosphotransferase, N-terminal domain DKE48_006645 IPR042081 RNA 2'-phosphotransferase, C-terminal domain DKE48_006645 IPR002745 Phosphotransferase KptA/Tpt1 DKE48_006645 IPR022928 RNA 2'-phosphotransferase KptA, putative DKE48_006695 IPR036390 Winged helix DNA-binding domain superfamily DKE48_006695 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_006695 IPR000847 Transcription regulator HTH, LysR DKE48_006695 IPR005119 LysR, substrate-binding DKE48_006705 IPR016161 Aldehyde/histidinol dehydrogenase DKE48_006705 IPR016163 Aldehyde dehydrogenase, C-terminal DKE48_006705 IPR016160 Aldehyde dehydrogenase, cysteine active site DKE48_006705 IPR016162 Aldehyde dehydrogenase, N-terminal DKE48_006705 IPR015590 Aldehyde dehydrogenase domain DKE48_006705 IPR010061 Methylmalonate-semialdehyde dehydrogenase DKE48_006755 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit DKE48_006755 IPR000073 Alpha/beta hydrolase fold-1 DKE48_006755 IPR029058 Alpha/Beta hydrolase fold DKE48_006830 IPR029058 Alpha/Beta hydrolase fold DKE48_006830 IPR022742 Serine aminopeptidase, S33 DKE48_006850 IPR018060 DNA binding HTH domain, AraC-type DKE48_006850 IPR009057 Homeobox-like domain superfamily DKE48_006850 IPR009594 Transcription regulator HTH, AraC, N-terminal DKE48_006870 IPR007498 Intermembrane transport protein PqiA-like DKE48_006870 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type DKE48_006890 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily DKE48_006890 IPR023419 Transthyretin, conserved site DKE48_006890 IPR000895 Transthyretin/hydroxyisourate hydrolase DKE48_006890 IPR014306 Hydroxyisourate hydrolase DKE48_006890 IPR023416 Transthyretin/hydroxyisourate hydrolase domain DKE48_006890 IPR023418 Transthyretin, thyroxine binding site DKE48_006900 IPR039420 Transcriptional regulatory protein WalR-like DKE48_006900 IPR001789 Signal transduction response regulator, receiver domain DKE48_006900 IPR011006 CheY-like superfamily DKE48_006900 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_006900 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response DKE48_006900 IPR001867 OmpR/PhoB-type DNA-binding domain DKE48_006950 IPR001789 Signal transduction response regulator, receiver domain DKE48_006950 IPR039420 Transcriptional regulatory protein WalR-like DKE48_006950 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_006950 IPR001867 OmpR/PhoB-type DNA-binding domain DKE48_006950 IPR011006 CheY-like superfamily DKE48_006965 IPR000620 EamA domain DKE48_006970 IPR012938 Glucose/Sorbosone dehydrogenase DKE48_006970 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase DKE48_006970 IPR011042 Six-bladed beta-propeller, TolB-like DKE48_007020 IPR020560 Phosphoribosylglycinamide synthetase, C-domain DKE48_007020 IPR000115 Phosphoribosylglycinamide synthetase DKE48_007020 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DKE48_007020 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily DKE48_007020 IPR013815 ATP-grasp fold, subdomain 1 DKE48_007020 IPR016185 Pre-ATP-grasp domain superfamily DKE48_007020 IPR011761 ATP-grasp fold DKE48_007020 IPR011054 Rudiment single hybrid motif DKE48_007020 IPR020559 Phosphoribosylglycinamide synthetase, conserved site DKE48_007020 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal DKE48_007030 IPR005412 DNA-binding protein Fis DKE48_007030 IPR002197 DNA binding HTH domain, Fis-type DKE48_007030 IPR009057 Homeobox-like domain superfamily DKE48_007040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_007040 IPR004498 Ribosomal protein L11 methyltransferase DKE48_007070 IPR002931 Transglutaminase-like DKE48_007070 IPR038765 Papain-like cysteine peptidase superfamily DKE48_007070 IPR013589 Bacterial transglutaminase-like, N-terminal DKE48_007085 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_007085 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DKE48_007085 IPR007693 DNA helicase, DnaB-like, N-terminal DKE48_007085 IPR007694 DNA helicase, DnaB-like, C-terminal DKE48_007085 IPR007692 DNA helicase, DnaB type DKE48_007085 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily DKE48_007085 IPR003593 AAA+ ATPase domain DKE48_007095 IPR018275 Ribosomal protein S18, conserved site DKE48_007095 IPR036870 Ribosomal protein S18 superfamily DKE48_007095 IPR001648 Ribosomal protein S18 DKE48_007100 IPR020815 Ribosomal protein S6, conserved site DKE48_007100 IPR000529 Ribosomal protein S6 DKE48_007100 IPR035980 Ribosomal protein S6 superfamily DKE48_007100 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DKE48_007100 IPR020814 Ribosomal protein S6, plastid/chloroplast DKE48_007110 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes DKE48_007110 IPR014210 Cytochrome o ubiquinol oxidase subunit IV DKE48_007205 IPR004373 Peptide chain release factor 1 DKE48_007205 IPR000352 Peptide chain release factor class I DKE48_007205 IPR005139 Peptide chain release factor DKE48_007230 IPR036291 NAD(P)-binding domain superfamily DKE48_007230 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_007230 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_007255 IPR004147 UbiB domain DKE48_007255 IPR000719 Protein kinase domain DKE48_007255 IPR011009 Protein kinase-like domain superfamily DKE48_007280 IPR003820 Potassium-transporting ATPase C chain DKE48_007290 IPR001867 OmpR/PhoB-type DNA-binding domain DKE48_007290 IPR011006 CheY-like superfamily DKE48_007290 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_007290 IPR001789 Signal transduction response regulator, receiver domain DKE48_007290 IPR039420 Transcriptional regulatory protein WalR-like DKE48_007305 IPR011566 Ubiquinone biosynthesis protein Coq7 DKE48_007305 IPR009078 Ferritin-like superfamily DKE48_007310 IPR011701 Major facilitator superfamily DKE48_007310 IPR036259 MFS transporter superfamily DKE48_007310 IPR023727 Lysophospholipid transporter LplT DKE48_007335 IPR015933 Aconitase B, HEAT-like domain DKE48_007335 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DKE48_007335 IPR018136 Aconitase family, 4Fe-4S cluster binding site DKE48_007335 IPR004406 Aconitase B DKE48_007335 IPR015932 Aconitase, domain 2 DKE48_007335 IPR015929 Aconitase B, swivel DKE48_007335 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DKE48_007335 IPR036008 Aconitase, iron-sulfur domain DKE48_007335 IPR036288 Aconitase B, HEAT-like domain superfamily DKE48_007335 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DKE48_007365 IPR007382 Uncharacterised protein family UPF0756, transmembrame DKE48_007395 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_007395 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE DKE48_007410 IPR010920 LSM domain superfamily DKE48_007410 IPR005001 RNA-binding protein Hfq DKE48_007445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_007445 IPR025777 GMP synthetase ATP pyrophosphatase domain DKE48_007445 IPR022955 GMP synthase DKE48_007445 IPR004739 GMP synthase, glutamine amidotransferase DKE48_007445 IPR001674 GMP synthase, C-terminal DKE48_007445 IPR017926 Glutamine amidotransferase DKE48_007445 IPR022310 NAD/GMP synthase DKE48_007445 IPR029062 Class I glutamine amidotransferase-like DKE48_007455 IPR013785 Aldolase-type TIM barrel DKE48_007455 IPR010628 Ethanolamine ammonia lyase large subunit DKE48_007460 IPR002293 Amino acid/polyamine transporter I DKE48_007465 IPR016160 Aldehyde dehydrogenase, cysteine active site DKE48_007465 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DKE48_007465 IPR015590 Aldehyde dehydrogenase domain DKE48_007465 IPR016162 Aldehyde dehydrogenase, N-terminal DKE48_007465 IPR016163 Aldehyde dehydrogenase, C-terminal DKE48_007465 IPR016161 Aldehyde/histidinol dehydrogenase DKE48_007480 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DKE48_007480 IPR039697 Iron-type alcohol dehydrogenase-like DKE48_007480 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DKE48_007495 IPR010499 Bacterial transcription activator, effector binding DKE48_007495 IPR029442 GyrI-like small molecule binding domain DKE48_007495 IPR011256 Regulatory factor, effector binding domain superfamily DKE48_007500 IPR029056 Ribokinase-like DKE48_007500 IPR000417 Hydroxyethylthiazole kinase DKE48_007530 IPR000015 Outer membrane usher protein DKE48_007530 IPR042186 Outer membrane usher protein FimD, plug domain DKE48_007530 IPR025949 PapC-like, C-terminal domain DKE48_007530 IPR025885 PapC, N-terminal domain DKE48_007530 IPR037224 PapC, N-terminal domain superfamily DKE48_007530 IPR018030 Fimbrial membrane usher, conserved site DKE48_007560 IPR008240 Chorismate mutase, periplasmic DKE48_007560 IPR036263 Chorismate mutase type II superfamily DKE48_007560 IPR002701 Chorismate mutase II, prokaryotic-type DKE48_007600 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DKE48_007600 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase DKE48_007600 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DKE48_007600 IPR040442 Pyruvate kinase-like domain superfamily DKE48_007600 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales DKE48_007630 IPR030192 Miniconductance mechanosensitive channel YbdG DKE48_007630 IPR011066 Mechanosensitive ion channel MscS, C-terminal DKE48_007630 IPR006685 Mechanosensitive ion channel MscS DKE48_007630 IPR010920 LSM domain superfamily DKE48_007710 IPR004711 Benzoate transporter DKE48_007715 IPR011008 Dimeric alpha-beta barrel DKE48_007715 IPR000485 AsnC-type HTH domain DKE48_007715 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_007715 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DKE48_007715 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE48_007715 IPR011991 ArsR-like helix-turn-helix domain DKE48_007715 IPR019888 Transcription regulator AsnC-type DKE48_007715 IPR036390 Winged helix DNA-binding domain superfamily DKE48_007720 IPR004778 Homoserine/Threonine efflux protein DKE48_007720 IPR001123 Amino acid exporter protein, LeuE-type DKE48_007730 IPR005119 LysR, substrate-binding DKE48_007730 IPR000847 Transcription regulator HTH, LysR DKE48_007730 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_007730 IPR036390 Winged helix DNA-binding domain superfamily DKE48_007745 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_007745 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_007745 IPR036291 NAD(P)-binding domain superfamily DKE48_007745 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DKE48_007820 IPR017867 Protein-tyrosine phosphatase, low molecular weight DKE48_007820 IPR023485 Phosphotyrosine protein phosphatase I DKE48_007820 IPR036196 Phosphotyrosine protein phosphatase I superfamily DKE48_007825 IPR016166 FAD-binding domain, PCMH-type DKE48_007825 IPR036318 FAD-binding, type PCMH-like superfamily DKE48_007825 IPR016167 FAD-binding, type PCMH, subdomain 1 DKE48_007825 IPR016169 FAD-binding, type PCMH, subdomain 2 DKE48_007825 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase DKE48_007825 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal DKE48_007825 IPR006094 FAD linked oxidase, N-terminal DKE48_007825 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily DKE48_007900 IPR000089 Biotin/lipoyl attachment DKE48_007900 IPR001882 Biotin-binding site DKE48_007900 IPR011053 Single hybrid motif DKE48_007900 IPR001249 Acetyl-CoA biotin carboxyl carrier DKE48_007920 IPR001867 OmpR/PhoB-type DNA-binding domain DKE48_007920 IPR001789 Signal transduction response regulator, receiver domain DKE48_007920 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_007920 IPR039420 Transcriptional regulatory protein WalR-like DKE48_007920 IPR016032 Signal transduction response regulator, C-terminal effector DKE48_007920 IPR011006 CheY-like superfamily DKE48_007965 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily DKE48_007965 IPR003448 Molybdopterin biosynthesis MoaE DKE48_008010 IPR017463 Sulphur relay, TusD/DsrE DKE48_008010 IPR027396 DsrEFH-like DKE48_008010 IPR003787 Sulphur relay, DsrE/F-like protein DKE48_008015 IPR005886 UDP-glucose 4-epimerase DKE48_008015 IPR036291 NAD(P)-binding domain superfamily DKE48_008015 IPR016040 NAD(P)-binding domain DKE48_008045 IPR006076 FAD dependent oxidoreductase DKE48_008045 IPR023080 D-amino acid dehydrogenase DadA DKE48_008045 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_008055 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase DKE48_008055 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site DKE48_008055 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily DKE48_008075 IPR001789 Signal transduction response regulator, receiver domain DKE48_008075 IPR009057 Homeobox-like domain superfamily DKE48_008075 IPR003593 AAA+ ATPase domain DKE48_008075 IPR002078 RNA polymerase sigma factor 54 interaction domain DKE48_008075 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_008075 IPR025944 Sigma-54 interaction domain, conserved site DKE48_008075 IPR010114 DNA-binding transcriptional regulator NtrC DKE48_008075 IPR011006 CheY-like superfamily DKE48_008075 IPR002197 DNA binding HTH domain, Fis-type DKE48_008075 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DKE48_008075 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DKE48_008095 IPR015963 Uridylate kinase, bacteria DKE48_008095 IPR011817 Uridylate kinase DKE48_008095 IPR001048 Aspartate/glutamate/uridylate kinase DKE48_008095 IPR036393 Acetylglutamate kinase-like superfamily DKE48_008110 IPR000374 Phosphatidate cytidylyltransferase DKE48_008140 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DKE48_008140 IPR029069 HotDog domain superfamily DKE48_008140 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ DKE48_008160 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_008160 IPR003783 Regulatory protein RecX DKE48_008175 IPR023214 HAD superfamily DKE48_008175 IPR041492 Haloacid dehalogenase-like hydrolase DKE48_008175 IPR006439 HAD hydrolase, subfamily IA DKE48_008175 IPR036412 HAD-like superfamily DKE48_008205 IPR004841 Amino acid permease/ SLC12A domain DKE48_008205 IPR004840 Amino acid permease, conserved site DKE48_008225 IPR011547 SLC26A/SulP transporter domain DKE48_008225 IPR002645 STAS domain DKE48_008225 IPR018045 Sulphate anion transporter, conserved site DKE48_008225 IPR036513 STAS domain superfamily DKE48_008225 IPR001902 SLC26A/SulP transporter DKE48_008320 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE48_008320 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE48_008320 IPR015424 Pyridoxal phosphate-dependent transferase DKE48_008320 IPR005814 Aminotransferase class-III DKE48_008320 IPR004636 Acetylornithine/Succinylornithine transaminase family DKE48_008325 IPR035474 KpsF-like, SIS domain DKE48_008325 IPR001347 Sugar isomerase (SIS) DKE48_008325 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type DKE48_008325 IPR000644 CBS domain DKE48_008375 IPR011724 Cyd operon protein YbgT DKE48_008375 IPR012994 Membrane bound YbgT-like DKE48_008425 IPR003445 Cation transporter DKE48_008425 IPR004772 TrkH potassium transport family DKE48_008465 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DKE48_008465 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DKE48_008465 IPR003769 Adaptor protein ClpS, core DKE48_008470 IPR003959 ATPase, AAA-type, core DKE48_008470 IPR019489 Clp ATPase, C-terminal DKE48_008470 IPR036628 Clp, N-terminal domain superfamily DKE48_008470 IPR004176 Clp, N-terminal DKE48_008470 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA DKE48_008470 IPR003593 AAA+ ATPase domain DKE48_008470 IPR001270 ClpA/B family DKE48_008470 IPR018368 ClpA/B, conserved site 1 DKE48_008470 IPR028299 ClpA/B, conserved site 2 DKE48_008470 IPR041546 ClpA/ClpB, AAA lid domain DKE48_008470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_008520 IPR029062 Class I glutamine amidotransferase-like DKE48_008520 IPR017926 Glutamine amidotransferase DKE48_008520 IPR033828 CTP synthase GATase domain DKE48_008520 IPR017456 CTP synthase, N-terminal DKE48_008520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_008520 IPR004468 CTP synthase DKE48_008535 IPR023090 UPF0702, alpha/beta domain superfamily DKE48_008535 IPR007353 Protein of unknown function DUF421 DKE48_008545 IPR023081 Cell division protein FtsB DKE48_008545 IPR007060 Septum formation initiator FtsL/DivIC DKE48_008555 IPR004163 Coenzyme A transferase binding site DKE48_008555 IPR004165 Coenzyme A transferase family I DKE48_008555 IPR012792 3-oxoacid CoA-transferase, subunit A DKE48_008555 IPR037171 NagB/RpiA transferase-like DKE48_008560 IPR004164 Coenzyme A transferase active site DKE48_008560 IPR004165 Coenzyme A transferase family I DKE48_008560 IPR012791 3-oxoacid CoA-transferase, subunit B DKE48_008560 IPR037171 NagB/RpiA transferase-like DKE48_008585 IPR029032 AhpD-like DKE48_008585 IPR003779 Carboxymuconolactone decarboxylase-like DKE48_008585 IPR012788 4-carboxymuconolactone decarboxylase DKE48_008595 IPR015889 Intradiol ring-cleavage dioxygenase, core DKE48_008595 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit DKE48_008595 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal DKE48_008605 IPR012334 Pectin lyase fold DKE48_008605 IPR011050 Pectin lyase fold/virulence factor DKE48_008605 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain DKE48_008605 IPR006626 Parallel beta-helix repeat DKE48_008675 IPR011701 Major facilitator superfamily DKE48_008675 IPR020846 Major facilitator superfamily domain DKE48_008675 IPR036259 MFS transporter superfamily DKE48_008705 IPR017639 Benzoate 1,2-dioxygenase, large subunit DKE48_008705 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DKE48_008705 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DKE48_008705 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site DKE48_008705 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit DKE48_008705 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain DKE48_008725 IPR036390 Winged helix DNA-binding domain superfamily DKE48_008725 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_008725 IPR002563 Flavin reductase like domain DKE48_008725 IPR012349 FMN-binding split barrel DKE48_008760 IPR004165 Coenzyme A transferase family I DKE48_008760 IPR004164 Coenzyme A transferase active site DKE48_008760 IPR037171 NagB/RpiA transferase-like DKE48_008760 IPR012791 3-oxoacid CoA-transferase, subunit B DKE48_008770 IPR007535 Catechol dioxygenase, N-terminal DKE48_008770 IPR012801 Catechol 1,2-dioxygenase, proteobacteria DKE48_008770 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal DKE48_008770 IPR015889 Intradiol ring-cleavage dioxygenase, core DKE48_008775 IPR026029 Muconolactone isomerase domain DKE48_008775 IPR003464 Muconolactone delta-isomerase DKE48_008775 IPR011008 Dimeric alpha-beta barrel DKE48_008825 IPR000073 Alpha/beta hydrolase fold-1 DKE48_008825 IPR029058 Alpha/Beta hydrolase fold DKE48_008825 IPR000639 Epoxide hydrolase-like DKE48_008840 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal DKE48_008840 IPR024072 Dihydrofolate reductase-like domain superfamily DKE48_008860 IPR001279 Metallo-beta-lactamase DKE48_008860 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE48_008860 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D DKE48_008865 IPR001647 DNA-binding HTH domain, TetR-type DKE48_008865 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE48_008865 IPR013570 Transcription regulator YsiA, C-terminal DKE48_008865 IPR009057 Homeobox-like domain superfamily DKE48_008925 IPR036259 MFS transporter superfamily DKE48_008925 IPR020846 Major facilitator superfamily domain DKE48_008925 IPR011701 Major facilitator superfamily DKE48_008930 IPR032466 Metal-dependent hydrolase DKE48_008930 IPR006680 Amidohydrolase-related DKE48_009005 IPR036259 MFS transporter superfamily DKE48_009005 IPR020846 Major facilitator superfamily domain DKE48_009005 IPR011701 Major facilitator superfamily DKE48_009045 IPR000836 Phosphoribosyltransferase domain DKE48_009045 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site DKE48_009045 IPR005946 Ribose-phosphate pyrophosphokinase DKE48_009045 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type DKE48_009045 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain DKE48_009045 IPR029057 Phosphoribosyltransferase-like DKE48_009075 IPR000120 Amidase DKE48_009075 IPR020556 Amidase, conserved site DKE48_009075 IPR023631 Amidase signature domain DKE48_009075 IPR036928 Amidase signature (AS) superfamily DKE48_009085 IPR011701 Major facilitator superfamily DKE48_009085 IPR036259 MFS transporter superfamily DKE48_009085 IPR020846 Major facilitator superfamily domain DKE48_009085 IPR004638 Drug resistance transporter EmrB-like DKE48_009120 IPR007685 RelA/SpoT DKE48_009120 IPR004095 TGS DKE48_009120 IPR003607 HD/PDEase domain DKE48_009120 IPR012675 Beta-grasp domain superfamily DKE48_009120 IPR002912 ACT domain DKE48_009120 IPR012676 TGS-like DKE48_009120 IPR033655 RelA, TGS domain DKE48_009120 IPR004811 RelA/SpoT family DKE48_009155 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_009155 IPR036291 NAD(P)-binding domain superfamily DKE48_009155 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_009220 IPR039458 FimA-like DKE48_009220 IPR036937 Fimbrial-type adhesion domain superfamily DKE48_009220 IPR008966 Adhesion domain superfamily DKE48_009305 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site DKE48_009305 IPR017200 Coenzyme PQQ synthesis protein E DKE48_009305 IPR006638 Elp3/MiaB/NifB DKE48_009305 IPR013785 Aldolase-type TIM barrel DKE48_009305 IPR023885 4Fe4S-binding SPASM domain DKE48_009305 IPR007197 Radical SAM DKE48_009305 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria DKE48_009310 IPR041881 Coenzyme PQQ synthesis protein D superfamily DKE48_009310 IPR008792 Coenzyme PQQ synthesis protein D DKE48_009310 IPR022479 Coenzyme PQQ synthesis D, bacteria DKE48_009315 IPR039068 Pyrroloquinoline-quinone synthase-like DKE48_009315 IPR004305 Thiaminase-2/PQQC DKE48_009315 IPR011845 Coenzyme PQQ biosynthesis protein C DKE48_009315 IPR016084 Haem oxygenase-like, multi-helical DKE48_009380 IPR005153 MbtH-like domain DKE48_009380 IPR038020 MbtH-like domain superfamily DKE48_009380 IPR037407 MbtH-like protein DKE48_009435 IPR008995 Molybdate/tungstate binding, C-terminal DKE48_009435 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_009435 IPR005116 Transport-associated OB, type 1 DKE48_009435 IPR000847 Transcription regulator HTH, LysR DKE48_009435 IPR004606 Molybdenum-pterin binding DKE48_009435 IPR003725 Molybdenum-binding protein ModE, N-terminal DKE48_009435 IPR036390 Winged helix DNA-binding domain superfamily DKE48_009435 IPR016462 Molybdate-dependent transcriptional regulator ModE DKE48_009465 IPR036390 Winged helix DNA-binding domain superfamily DKE48_009465 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_009465 IPR012349 FMN-binding split barrel DKE48_009465 IPR002563 Flavin reductase like domain DKE48_009480 IPR029058 Alpha/Beta hydrolase fold DKE48_009480 IPR002925 Dienelactone hydrolase DKE48_009495 IPR036291 NAD(P)-binding domain superfamily DKE48_009495 IPR011294 3-hydroxybutyrate dehydrogenase DKE48_009495 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_009495 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_009540 IPR004163 Coenzyme A transferase binding site DKE48_009540 IPR037171 NagB/RpiA transferase-like DKE48_009540 IPR004165 Coenzyme A transferase family I DKE48_009540 IPR012792 3-oxoacid CoA-transferase, subunit A DKE48_009560 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_009560 IPR036390 Winged helix DNA-binding domain superfamily DKE48_009560 IPR005119 LysR, substrate-binding DKE48_009560 IPR000847 Transcription regulator HTH, LysR DKE48_009670 IPR005939 Beta-lactamase hydrolase-like DKE48_009670 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE48_009670 IPR001279 Metallo-beta-lactamase DKE48_009670 IPR029021 Protein-tyrosine phosphatase-like DKE48_009680 IPR021134 Bestrophin/UPF0187 DKE48_009685 IPR013149 Alcohol dehydrogenase, C-terminal DKE48_009685 IPR036291 NAD(P)-binding domain superfamily DKE48_009685 IPR011032 GroES-like superfamily DKE48_009685 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DKE48_009685 IPR013154 Alcohol dehydrogenase, N-terminal DKE48_009685 IPR020843 Polyketide synthase, enoylreductase domain DKE48_009710 IPR029061 Thiamin diphosphate-binding fold DKE48_009710 IPR001017 Dehydrogenase, E1 component DKE48_009755 IPR003593 AAA+ ATPase domain DKE48_009755 IPR003959 ATPase, AAA-type, core DKE48_009755 IPR037219 Peptidase M41-like DKE48_009755 IPR041569 AAA ATPase, AAA+ lid domain DKE48_009755 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_009755 IPR005936 Peptidase, FtsH DKE48_009755 IPR000642 Peptidase M41 DKE48_009785 IPR002562 3'-5' exonuclease domain DKE48_009785 IPR002121 HRDC domain DKE48_009785 IPR006292 Ribonuclease D DKE48_009785 IPR012337 Ribonuclease H-like superfamily DKE48_009785 IPR036397 Ribonuclease H superfamily DKE48_009785 IPR010997 HRDC-like superfamily DKE48_009895 IPR003835 Glycosyl transferase, family 19 DKE48_009920 IPR002781 Transmembrane protein TauE-like DKE48_010000 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE48_010000 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE48_010000 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE48_010000 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE48_010000 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE48_010000 IPR006089 Acyl-CoA dehydrogenase, conserved site DKE48_010000 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE48_010035 IPR036390 Winged helix DNA-binding domain superfamily DKE48_010035 IPR010242 Transcription factor HTH, IscR DKE48_010035 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_010035 IPR000944 Transcription regulator Rrf2-type DKE48_010035 IPR030489 Transcription regulator Rrf2-type, conserved site DKE48_010050 IPR016092 FeS cluster insertion protein DKE48_010050 IPR017870 FeS cluster insertion, C-terminal, conserved site DKE48_010050 IPR035903 HesB-like domain superfamily DKE48_010050 IPR000361 FeS cluster biogenesis DKE48_010050 IPR011302 Iron-binding protein IscA, proteobacteria DKE48_010065 IPR001055 Adrenodoxin DKE48_010065 IPR018298 Adrenodoxin, iron-sulphur binding site DKE48_010065 IPR012675 Beta-grasp domain superfamily DKE48_010065 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DKE48_010065 IPR036010 2Fe-2S ferredoxin-like superfamily DKE48_010065 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria DKE48_010105 IPR000534 Semialdehyde dehydrogenase, NAD-binding DKE48_010105 IPR016040 NAD(P)-binding domain DKE48_010105 IPR036291 NAD(P)-binding domain superfamily DKE48_010145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE48_010145 IPR035906 MetI-like superfamily DKE48_010175 IPR037066 TonB-dependent receptor, plug domain superfamily DKE48_010175 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DKE48_010175 IPR010917 TonB-dependent receptor, conserved site DKE48_010175 IPR010101 TonB-dependent vitamin B12 transporter BtuB DKE48_010175 IPR039426 Vitamin B12 transporter BtuB-like DKE48_010175 IPR000531 TonB-dependent receptor-like, beta-barrel DKE48_010175 IPR010916 TonB box, conserved site DKE48_010175 IPR012910 TonB-dependent receptor, plug domain DKE48_010185 IPR002898 MotA/TolQ/ExbB proton channel DKE48_010225 IPR005642 Lysine exporter LysO DKE48_010240 IPR005685 Integration host factor, beta subunit DKE48_010240 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DKE48_010240 IPR020816 Histone-like DNA-binding protein, conserved site DKE48_010240 IPR000119 Histone-like DNA-binding protein DKE48_010245 IPR000110 Ribosomal protein S1 DKE48_010245 IPR022967 RNA-binding domain, S1 DKE48_010245 IPR003029 S1 domain DKE48_010245 IPR012340 Nucleic acid-binding, OB-fold DKE48_010285 IPR010055 Type II secretion system protein J DKE48_010285 IPR012902 Prokaryotic N-terminal methylation site DKE48_010320 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase DKE48_010320 IPR029044 Nucleotide-diphospho-sugar transferases DKE48_010320 IPR003329 Acylneuraminate cytidylyltransferase DKE48_010330 IPR003593 AAA+ ATPase domain DKE48_010330 IPR011527 ABC transporter type 1, transmembrane domain DKE48_010330 IPR039421 Type I protein exporter DKE48_010330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_010330 IPR011917 ABC transporter, lipid A export, MsbA DKE48_010330 IPR017871 ABC transporter, conserved site DKE48_010330 IPR003439 ABC transporter-like DKE48_010330 IPR036640 ABC transporter type 1, transmembrane domain superfamily DKE48_010350 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_010350 IPR025669 AAA domain DKE48_010365 IPR011009 Protein kinase-like domain superfamily DKE48_010365 IPR002575 Aminoglycoside phosphotransferase DKE48_010380 IPR013785 Aldolase-type TIM barrel DKE48_010380 IPR000771 Fructose-bisphosphate aldolase, class-II DKE48_010380 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype DKE48_010400 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DKE48_010400 IPR029001 Inosine triphosphate pyrophosphatase-like DKE48_010405 IPR003347 JmjC domain DKE48_010405 IPR039994 JmjC domain-containing DKE48_010415 IPR036390 Winged helix DNA-binding domain superfamily DKE48_010415 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_010415 IPR001845 HTH ArsR-type DNA-binding domain DKE48_010415 IPR011991 ArsR-like helix-turn-helix domain DKE48_010420 IPR023025 Serine/threonine transporter SstT DKE48_010420 IPR036458 Sodium:dicarboxylate symporter superfamily DKE48_010420 IPR001991 Sodium:dicarboxylate symporter DKE48_010430 IPR018636 Protein of unknown function DUF2058 DKE48_010450 IPR011053 Single hybrid motif DKE48_010450 IPR033753 Glycine cleavage system H-protein/Simiate DKE48_010450 IPR002930 Glycine cleavage system H-protein DKE48_010450 IPR000089 Biotin/lipoyl attachment DKE48_010450 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DKE48_010450 IPR017453 Glycine cleavage system H-protein, subgroup DKE48_010455 IPR026590 Sirtuin family, catalytic core domain DKE48_010455 IPR029035 DHS-like NAD/FAD-binding domain superfamily DKE48_010455 IPR027546 Sirtuin, class III DKE48_010455 IPR026591 Sirtuin, catalytic core small domain superfamily DKE48_010455 IPR003000 Sirtuin family DKE48_010465 IPR036390 Winged helix DNA-binding domain superfamily DKE48_010465 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_010465 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DKE48_010465 IPR011991 ArsR-like helix-turn-helix domain DKE48_010465 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE48_010465 IPR019888 Transcription regulator AsnC-type DKE48_010465 IPR011008 Dimeric alpha-beta barrel DKE48_010465 IPR000485 AsnC-type HTH domain DKE48_010475 IPR007344 GrpB/Dephospho-CoA kinase DKE48_010490 IPR018711 Phosphodiester glycosidase DKE48_010500 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DKE48_010500 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DKE48_010500 IPR023480 Uncharacterised protein family UPF0312/YceI DKE48_010515 IPR022629 S-adenosylmethionine synthetase, central domain DKE48_010515 IPR022636 S-adenosylmethionine synthetase superfamily DKE48_010515 IPR022628 S-adenosylmethionine synthetase, N-terminal DKE48_010515 IPR002133 S-adenosylmethionine synthetase DKE48_010515 IPR022630 S-adenosylmethionine synthetase, C-terminal DKE48_010515 IPR022631 S-adenosylmethionine synthetase, conserved site DKE48_010535 IPR000182 GNAT domain DKE48_010535 IPR016181 Acyl-CoA N-acyltransferase DKE48_010575 IPR036937 Fimbrial-type adhesion domain superfamily DKE48_010575 IPR008966 Adhesion domain superfamily DKE48_010575 IPR039458 FimA-like DKE48_010610 IPR000620 EamA domain DKE48_010660 IPR017856 Integrase-like, N-terminal DKE48_010660 IPR002876 Transcriptional regulator TACO1-like DKE48_010660 IPR026564 Transcriptional regulator TACO1-like, domain 3 DKE48_010660 IPR029072 YebC-like DKE48_010720 IPR004872 Lipoprotein NlpA family DKE48_010725 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain DKE48_010725 IPR003593 AAA+ ATPase domain DKE48_010725 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_010725 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal DKE48_010725 IPR026253 Methionine import ATP-binding protein MetN DKE48_010725 IPR018449 NIL domain DKE48_010725 IPR017871 ABC transporter, conserved site DKE48_010725 IPR003439 ABC transporter-like DKE48_010775 IPR011054 Rudiment single hybrid motif DKE48_010775 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase DKE48_010775 IPR016185 Pre-ATP-grasp domain superfamily DKE48_010775 IPR011761 ATP-grasp fold DKE48_010775 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DKE48_010775 IPR013815 ATP-grasp fold, subdomain 1 DKE48_010805 IPR002579 Peptide methionine sulphoxide reductase MrsB DKE48_010805 IPR011057 Mss4-like superfamily DKE48_010805 IPR028427 Peptide methionine sulfoxide reductase DKE48_010810 IPR004839 Aminotransferase, class I/classII DKE48_010810 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE48_010810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE48_010810 IPR015424 Pyridoxal phosphate-dependent transferase DKE48_010830 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKE48_010830 IPR001537 tRNA/rRNA methyltransferase, SpoU type DKE48_010830 IPR004384 RNA methyltransferase TrmJ/LasT DKE48_010830 IPR029028 Alpha/beta knot methyltransferases DKE48_010850 IPR012081 Alkyl hydroperoxide reductase subunit F DKE48_010850 IPR002109 Glutaredoxin DKE48_010850 IPR023753 FAD/NAD(P)-binding domain DKE48_010850 IPR012336 Thioredoxin-like fold DKE48_010850 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DKE48_010850 IPR036249 Thioredoxin-like superfamily DKE48_010850 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_010875 IPR001845 HTH ArsR-type DNA-binding domain DKE48_010875 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_010875 IPR036390 Winged helix DNA-binding domain superfamily DKE48_010875 IPR011991 ArsR-like helix-turn-helix domain DKE48_010880 IPR006660 Arsenate reductase-like DKE48_010880 IPR006659 Arsenate reductase DKE48_010880 IPR036249 Thioredoxin-like superfamily DKE48_010890 IPR011059 Metal-dependent hydrolase, composite domain superfamily DKE48_010890 IPR006680 Amidohydrolase-related DKE48_010890 IPR026912 Adenine deaminase C-terminal domain DKE48_010890 IPR006679 Adenine deaminase DKE48_010890 IPR032466 Metal-dependent hydrolase DKE48_010930 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_010930 IPR015859 ABC transporter, taurine import, TauD DKE48_010930 IPR003593 AAA+ ATPase domain DKE48_010930 IPR003439 ABC transporter-like DKE48_010930 IPR017871 ABC transporter, conserved site DKE48_010945 IPR036259 MFS transporter superfamily DKE48_010945 IPR005829 Sugar transporter, conserved site DKE48_010945 IPR020846 Major facilitator superfamily domain DKE48_010945 IPR005828 Major facilitator, sugar transporter-like DKE48_010965 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DKE48_010970 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DKE48_010980 IPR000524 Transcription regulator HTH, GntR DKE48_010980 IPR015424 Pyridoxal phosphate-dependent transferase DKE48_010980 IPR004839 Aminotransferase, class I/classII DKE48_010980 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE48_010980 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE48_010980 IPR036390 Winged helix DNA-binding domain superfamily DKE48_010980 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011000 IPR014043 Acyl transferase DKE48_011000 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type DKE48_011000 IPR024925 Malonyl CoA-acyl carrier protein transacylase DKE48_011000 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DKE48_011000 IPR001227 Acyl transferase domain superfamily DKE48_011000 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DKE48_011010 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal DKE48_011010 IPR029045 ClpP/crotonase-like domain superfamily DKE48_011010 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit DKE48_011015 IPR017556 Biotin-independent malonate decarboxylase, beta subunit DKE48_011015 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal DKE48_011015 IPR029045 ClpP/crotonase-like domain superfamily DKE48_011015 IPR034733 Acetyl-CoA carboxylase DKE48_011035 IPR036259 MFS transporter superfamily DKE48_011035 IPR020846 Major facilitator superfamily domain DKE48_011035 IPR011701 Major facilitator superfamily DKE48_011055 IPR005261 Conserved hypothetical protein CHP00659 DKE48_011055 IPR007300 CidB/LrgB family DKE48_011080 IPR000847 Transcription regulator HTH, LysR DKE48_011080 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011080 IPR005119 LysR, substrate-binding DKE48_011080 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011135 IPR003593 AAA+ ATPase domain DKE48_011135 IPR003439 ABC transporter-like DKE48_011135 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DKE48_011135 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_011135 IPR017871 ABC transporter, conserved site DKE48_011160 IPR001789 Signal transduction response regulator, receiver domain DKE48_011160 IPR037522 HD-GYP domain DKE48_011160 IPR003607 HD/PDEase domain DKE48_011160 IPR011006 CheY-like superfamily DKE48_011175 IPR011991 ArsR-like helix-turn-helix domain DKE48_011175 IPR000485 AsnC-type HTH domain DKE48_011175 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE48_011175 IPR019888 Transcription regulator AsnC-type DKE48_011175 IPR011008 Dimeric alpha-beta barrel DKE48_011175 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011175 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011175 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DKE48_011210 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_011210 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_011210 IPR036291 NAD(P)-binding domain superfamily DKE48_011260 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011260 IPR005119 LysR, substrate-binding DKE48_011260 IPR000847 Transcription regulator HTH, LysR DKE48_011260 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011290 IPR006089 Acyl-CoA dehydrogenase, conserved site DKE48_011290 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE48_011290 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE48_011290 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE48_011290 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE48_011290 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE48_011290 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE48_011300 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE48_011300 IPR014748 Enoyl-CoA hydratase, C-terminal DKE48_011300 IPR001753 Enoyl-CoA hydratase/isomerase DKE48_011300 IPR029045 ClpP/crotonase-like domain superfamily DKE48_011305 IPR016185 Pre-ATP-grasp domain superfamily DKE48_011305 IPR011053 Single hybrid motif DKE48_011305 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DKE48_011305 IPR000089 Biotin/lipoyl attachment DKE48_011305 IPR011054 Rudiment single hybrid motif DKE48_011305 IPR005482 Biotin carboxylase, C-terminal DKE48_011305 IPR011764 Biotin carboxylation domain DKE48_011305 IPR001882 Biotin-binding site DKE48_011305 IPR005481 Biotin carboxylase-like, N-terminal domain DKE48_011305 IPR011761 ATP-grasp fold DKE48_011360 IPR012791 3-oxoacid CoA-transferase, subunit B DKE48_011360 IPR004164 Coenzyme A transferase active site DKE48_011360 IPR037171 NagB/RpiA transferase-like DKE48_011360 IPR004165 Coenzyme A transferase family I DKE48_011380 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE48_011380 IPR014748 Enoyl-CoA hydratase, C-terminal DKE48_011380 IPR029045 ClpP/crotonase-like domain superfamily DKE48_011380 IPR001753 Enoyl-CoA hydratase/isomerase DKE48_011400 IPR029016 GAF-like domain superfamily DKE48_011400 IPR005471 Transcription regulator IclR, N-terminal DKE48_011400 IPR014757 Transcription regulator IclR, C-terminal DKE48_011400 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011400 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011405 IPR020846 Major facilitator superfamily domain DKE48_011405 IPR036259 MFS transporter superfamily DKE48_011405 IPR011701 Major facilitator superfamily DKE48_011420 IPR029016 GAF-like domain superfamily DKE48_011420 IPR014757 Transcription regulator IclR, C-terminal DKE48_011420 IPR005471 Transcription regulator IclR, N-terminal DKE48_011420 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011420 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011425 IPR023606 CoA-transferase family III domain superfamily DKE48_011425 IPR003673 CoA-transferase family III DKE48_011445 IPR015424 Pyridoxal phosphate-dependent transferase DKE48_011445 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase DKE48_011445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE48_011445 IPR000192 Aminotransferase class V domain DKE48_011445 IPR012703 2-aminoethylphosphonate--pyruvate transaminase DKE48_011445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE48_011470 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011470 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011470 IPR011663 UbiC transcription regulator-associated DKE48_011470 IPR017722 Phosphonate utilization transcriptional regulator PhnR DKE48_011470 IPR000524 Transcription regulator HTH, GntR DKE48_011470 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKE48_011485 IPR003680 Flavodoxin-like fold DKE48_011485 IPR029039 Flavoprotein-like superfamily DKE48_011485 IPR023048 NADH-azoreductase, FMN-dependent DKE48_011490 IPR000847 Transcription regulator HTH, LysR DKE48_011490 IPR005119 LysR, substrate-binding DKE48_011490 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011490 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011495 IPR029032 AhpD-like DKE48_011495 IPR012788 4-carboxymuconolactone decarboxylase DKE48_011495 IPR003779 Carboxymuconolactone decarboxylase-like DKE48_011510 IPR026030 Purine-cytosine permease Fcy2/21/22 DKE48_011510 IPR001248 Purine-cytosine permease DKE48_011510 IPR038271 Purine-cytosine permease superfamily DKE48_011520 IPR015590 Aldehyde dehydrogenase domain DKE48_011520 IPR016161 Aldehyde/histidinol dehydrogenase DKE48_011520 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DKE48_011520 IPR016160 Aldehyde dehydrogenase, cysteine active site DKE48_011520 IPR016163 Aldehyde dehydrogenase, C-terminal DKE48_011520 IPR016162 Aldehyde dehydrogenase, N-terminal DKE48_011555 IPR016174 Di-haem cytochrome, transmembrane DKE48_011555 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DKE48_011565 IPR002577 Helix-turn-helix, HxlR type DKE48_011565 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011565 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011600 IPR023446 Carnitine operon protein CaiE DKE48_011600 IPR001451 Hexapeptide repeat DKE48_011600 IPR011004 Trimeric LpxA-like superfamily DKE48_011650 IPR009359 Phenylacetic acid degradation B DKE48_011650 IPR038693 Phenylacetyl-CoA epoxidase, subunit B DKE48_011655 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C DKE48_011655 IPR009078 Ferritin-like superfamily DKE48_011655 IPR012347 Ferritin-like DKE48_011655 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A DKE48_011705 IPR008794 Proline racemase family DKE48_011710 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011710 IPR000524 Transcription regulator HTH, GntR DKE48_011710 IPR008920 Transcription regulator FadR/GntR, C-terminal DKE48_011710 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011735 IPR000551 MerR-type HTH domain DKE48_011735 IPR010211 Redox-sensitive transcriptional activator SoxR DKE48_011735 IPR015358 Transcription regulator MerR, DNA binding DKE48_011735 IPR009061 Putative DNA-binding domain superfamily DKE48_011745 IPR003828 Epoxyqueuosine reductase QueH DKE48_011765 IPR002125 Cytidine and deoxycytidylate deaminase domain DKE48_011765 IPR016193 Cytidine deaminase-like DKE48_011765 IPR016192 APOBEC/CMP deaminase, zinc-binding DKE48_011770 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain DKE48_011770 IPR005119 LysR, substrate-binding DKE48_011770 IPR000847 Transcription regulator HTH, LysR DKE48_011770 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011770 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011860 IPR014864 Transcription factor, NikR, nickel binding C-terminal DKE48_011860 IPR010985 Ribbon-helix-helix DKE48_011860 IPR022988 Nickel-responsive transcriptional regulator NikR DKE48_011860 IPR013321 Arc-type ribbon-helix-helix DKE48_011860 IPR002145 Ribbon-helix-helix protein, CopG DKE48_011860 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DKE48_011870 IPR002577 Helix-turn-helix, HxlR type DKE48_011870 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_011870 IPR036390 Winged helix DNA-binding domain superfamily DKE48_011895 IPR036291 NAD(P)-binding domain superfamily DKE48_011895 IPR013149 Alcohol dehydrogenase, C-terminal DKE48_011895 IPR013154 Alcohol dehydrogenase, N-terminal DKE48_011895 IPR027399 Alcohol dehydrogenase GroES-associated DKE48_011895 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DKE48_011895 IPR011032 GroES-like superfamily DKE48_011960 IPR016938 Uncharacterised protein family UPF0317 DKE48_011960 IPR038021 Putative hydro-lyase DKE48_011960 IPR009906 D-glutamate cyclase DKE48_011965 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DKE48_011965 IPR005501 LamB/YcsF/PxpA-like DKE48_011995 IPR007801 Uncharacterised protein family UPF0276 DKE48_011995 IPR036237 Xylose isomerase-like superfamily DKE48_012010 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_012010 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_012010 IPR036291 NAD(P)-binding domain superfamily DKE48_012010 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DKE48_012025 IPR000620 EamA domain DKE48_012025 IPR000390 Small multidrug resistance protein family DKE48_012025 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE DKE48_012040 IPR010583 MltA-interacting MipA DKE48_012160 IPR002059 Cold-shock protein, DNA-binding DKE48_012160 IPR012156 Cold shock, CspA DKE48_012160 IPR011129 Cold shock domain DKE48_012160 IPR012340 Nucleic acid-binding, OB-fold DKE48_012160 IPR019844 Cold-shock (CSD) domain DKE48_012165 IPR017926 Glutamine amidotransferase DKE48_012165 IPR029062 Class I glutamine amidotransferase-like DKE48_012180 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_012180 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DKE48_012180 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE48_012180 IPR019888 Transcription regulator AsnC-type DKE48_012180 IPR011008 Dimeric alpha-beta barrel DKE48_012180 IPR000485 AsnC-type HTH domain DKE48_012180 IPR036390 Winged helix DNA-binding domain superfamily DKE48_012180 IPR011991 ArsR-like helix-turn-helix domain DKE48_012265 IPR020937 SecA conserved site DKE48_012265 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_012265 IPR011130 SecA, preprotein cross-linking domain DKE48_012265 IPR014018 SecA motor DEAD DKE48_012265 IPR036670 SecA, preprotein cross-linking domain superfamily DKE48_012265 IPR011115 SecA DEAD-like, N-terminal DKE48_012265 IPR000185 Protein translocase subunit SecA DKE48_012300 IPR040853 RapA2, cadherin-like domain DKE48_012300 IPR010221 VCBS repeat DKE48_012375 IPR036291 NAD(P)-binding domain superfamily DKE48_012375 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_012375 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_012380 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_012380 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_012380 IPR036291 NAD(P)-binding domain superfamily DKE48_012385 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_012385 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_012385 IPR036291 NAD(P)-binding domain superfamily DKE48_012400 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DKE48_012400 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DKE48_012400 IPR000813 7Fe ferredoxin DKE48_012400 IPR022569 Ferredoxin, C-terminal DKE48_012425 IPR036956 Impact, N-terminal domain superfamily DKE48_012425 IPR001498 Impact, N-terminal DKE48_012425 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site DKE48_012425 IPR020568 Ribosomal protein S5 domain 2-type fold DKE48_012425 IPR035647 EF-G domain III/V-like DKE48_012425 IPR023582 Impact family DKE48_012435 IPR005074 Peptidase C39, bacteriocin processing DKE48_012435 IPR003593 AAA+ ATPase domain DKE48_012435 IPR011527 ABC transporter type 1, transmembrane domain DKE48_012435 IPR039421 Type I protein exporter DKE48_012435 IPR036640 ABC transporter type 1, transmembrane domain superfamily DKE48_012435 IPR017871 ABC transporter, conserved site DKE48_012435 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_012435 IPR005897 Peptidase C39, ABC-type bacteriocin transporter DKE48_012435 IPR003439 ABC transporter-like DKE48_012445 IPR017871 ABC transporter, conserved site DKE48_012445 IPR003593 AAA+ ATPase domain DKE48_012445 IPR003439 ABC transporter-like DKE48_012445 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_012445 IPR030921 LPS export ABC transporter, ATP-binding protein LptB DKE48_012445 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DKE48_012450 IPR014340 Lipopolysaccharide export system protein LptA DKE48_012450 IPR005653 Organic solvent tolerance-like, N-terminal DKE48_012460 IPR023214 HAD superfamily DKE48_012460 IPR036412 HAD-like superfamily DKE48_012460 IPR010023 KdsC family DKE48_012550 IPR001123 Amino acid exporter protein, LeuE-type DKE48_012580 IPR020579 Exonuclease VII, large subunit, C-terminal DKE48_012580 IPR003753 Exonuclease VII, large subunit DKE48_012580 IPR025824 OB-fold nucleic acid binding domain DKE48_012635 IPR010353 Phenol hydroxylase subunit DKE48_012645 IPR036889 Monooxygenase component MmoB/DmpM superfamily DKE48_012645 IPR003454 Monooxygenase component MmoB/DmpM DKE48_012670 IPR005119 LysR, substrate-binding DKE48_012670 IPR000847 Transcription regulator HTH, LysR DKE48_012670 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_012670 IPR036390 Winged helix DNA-binding domain superfamily DKE48_012680 IPR032710 NTF2-like domain superfamily DKE48_012680 IPR017641 Benzoate 1,2-dioxygenase, small subunit DKE48_012680 IPR000391 Ring-hydroxylating dioxygenase beta subunit DKE48_012700 IPR005829 Sugar transporter, conserved site DKE48_012700 IPR011701 Major facilitator superfamily DKE48_012700 IPR020846 Major facilitator superfamily domain DKE48_012700 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family DKE48_012700 IPR036259 MFS transporter superfamily DKE48_012740 IPR036249 Thioredoxin-like superfamily DKE48_012740 IPR002109 Glutaredoxin DKE48_012740 IPR023753 FAD/NAD(P)-binding domain DKE48_012740 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_012740 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DKE48_012740 IPR012336 Thioredoxin-like fold DKE48_012740 IPR012081 Alkyl hydroperoxide reductase subunit F DKE48_012770 IPR001207 Transposase, mutator type DKE48_012835 IPR015946 K homology domain-like, alpha/beta DKE48_012835 IPR003718 OsmC/Ohr family DKE48_012835 IPR036102 OsmC/Ohr superfamily DKE48_012840 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_012840 IPR018335 Transcription regulator HTH, Crp-type, conserved site DKE48_012840 IPR014710 RmlC-like jelly roll fold DKE48_012840 IPR012318 Crp-type HTH domain DKE48_012840 IPR000595 Cyclic nucleotide-binding domain DKE48_012840 IPR036390 Winged helix DNA-binding domain superfamily DKE48_012840 IPR018488 Cyclic nucleotide-binding, conserved site DKE48_012840 IPR018490 Cyclic nucleotide-binding-like DKE48_012860 IPR042110 Adenylosuccinate synthetase, domain 2 DKE48_012860 IPR042111 Adenylosuccinate synthetase, domain 3 DKE48_012860 IPR001114 Adenylosuccinate synthetase DKE48_012860 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_012860 IPR033128 Adenylosuccinate synthase, active site DKE48_012860 IPR042109 Adenylosuccinate synthetase, domain 1 DKE48_012860 IPR018220 Adenylosuccinate synthase, GTP-binding site DKE48_012865 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit DKE48_012865 IPR004517 ATP phosphoribosyltransferase regulatory subunit DKE48_012865 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain DKE48_012870 IPR006422 D-erythrose-4-phosphate dehydrogenase DKE48_012870 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family DKE48_012870 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain DKE48_012870 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain DKE48_012870 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site DKE48_012870 IPR036291 NAD(P)-binding domain superfamily DKE48_012885 IPR003751 Translational regulator CsrA DKE48_012885 IPR036107 Carbon storage regulator superfamily DKE48_012905 IPR032466 Metal-dependent hydrolase DKE48_012905 IPR006330 Adenosine/adenine deaminase DKE48_012905 IPR028892 Adenine deaminase type 2 DKE48_012905 IPR001365 Adenosine/AMP deaminase domain DKE48_012930 IPR003829 Pirin, N-terminal domain DKE48_012930 IPR014710 RmlC-like jelly roll fold DKE48_012930 IPR012093 Pirin DKE48_012930 IPR011051 RmlC-like cupin domain superfamily DKE48_012930 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain DKE48_012945 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_012945 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_012945 IPR036291 NAD(P)-binding domain superfamily DKE48_012955 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp DKE48_012955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_012955 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP DKE48_012955 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative DKE48_013005 IPR036010 2Fe-2S ferredoxin-like superfamily DKE48_013005 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DKE48_013005 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DKE48_013005 IPR012675 Beta-grasp domain superfamily DKE48_013005 IPR017927 FAD-binding domain, ferredoxin reductase-type DKE48_013005 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DKE48_013005 IPR000951 Phthalate dioxygenase reductase DKE48_013005 IPR017938 Riboflavin synthase-like beta-barrel DKE48_013005 IPR001433 Oxidoreductase FAD/NAD(P)-binding DKE48_013020 IPR020846 Major facilitator superfamily domain DKE48_013020 IPR036259 MFS transporter superfamily DKE48_013020 IPR005829 Sugar transporter, conserved site DKE48_013020 IPR011701 Major facilitator superfamily DKE48_013090 IPR004840 Amino acid permease, conserved site DKE48_013090 IPR004841 Amino acid permease/ SLC12A domain DKE48_013095 IPR016181 Acyl-CoA N-acyltransferase DKE48_013095 IPR007041 Arginine N-succinyltransferase AstA/AruG DKE48_013095 IPR017650 Arginine N-succinyltransferase DKE48_013120 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_013120 IPR008920 Transcription regulator FadR/GntR, C-terminal DKE48_013120 IPR011711 GntR, C-terminal DKE48_013120 IPR000524 Transcription regulator HTH, GntR DKE48_013120 IPR036390 Winged helix DNA-binding domain superfamily DKE48_013130 IPR004841 Amino acid permease/ SLC12A domain DKE48_013150 IPR008517 Protein of unknown function DUF799 DKE48_013160 IPR005534 Curli production assembly/transport component CsgG DKE48_013230 IPR001294 Phytochrome DKE48_013230 IPR013515 Phytochrome, central region DKE48_013230 IPR000160 GGDEF domain DKE48_013230 IPR029016 GAF-like domain superfamily DKE48_013230 IPR003018 GAF domain DKE48_013230 IPR035919 EAL domain superfamily DKE48_013230 IPR029787 Nucleotide cyclase DKE48_013230 IPR016132 Phytochrome chromophore attachment domain DKE48_013230 IPR001633 EAL domain DKE48_013265 IPR013785 Aldolase-type TIM barrel DKE48_013265 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_013265 IPR023753 FAD/NAD(P)-binding domain DKE48_013265 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DKE48_013270 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_013270 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DKE48_013270 IPR017871 ABC transporter, conserved site DKE48_013270 IPR003593 AAA+ ATPase domain DKE48_013270 IPR003439 ABC transporter-like DKE48_013275 IPR035906 MetI-like superfamily DKE48_013275 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DKE48_013275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE48_013320 IPR003509 Uncharacterised protein family UPF0102 DKE48_013320 IPR011856 tRNA endonuclease-like domain superfamily DKE48_013320 IPR011335 Restriction endonuclease type II-like DKE48_013360 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 DKE48_013360 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DKE48_013360 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_013360 IPR002938 FAD-binding domain DKE48_013405 IPR002698 5-formyltetrahydrofolate cyclo-ligase DKE48_013405 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DKE48_013405 IPR037171 NagB/RpiA transferase-like DKE48_013415 IPR024973 ESPR domain DKE48_013415 IPR011049 Serralysin-like metalloprotease, C-terminal DKE48_013415 IPR008635 Coiled stalk of trimeric autotransporter adhesin DKE48_013415 IPR008640 Head domain of trimeric autotransporter adhesin DKE48_013415 IPR005594 YadA-like, C-terminal DKE48_013435 IPR005594 YadA-like, C-terminal DKE48_013435 IPR011049 Serralysin-like metalloprotease, C-terminal DKE48_013435 IPR024973 ESPR domain DKE48_013435 IPR008635 Coiled stalk of trimeric autotransporter adhesin DKE48_013435 IPR008640 Head domain of trimeric autotransporter adhesin DKE48_013450 IPR003742 RNA methyltransferase RlmH DKE48_013450 IPR029028 Alpha/beta knot methyltransferases DKE48_013450 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKE48_013455 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type DKE48_013455 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B DKE48_013485 IPR000850 Adenylate kinase/UMP-CMP kinase DKE48_013485 IPR033690 Adenylate kinase, conserved site DKE48_013485 IPR006259 Adenylate kinase subfamily DKE48_013485 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_013485 IPR007862 Adenylate kinase, active site lid domain DKE48_013520 IPR004400 Urease accessory protein UreG DKE48_013520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_013520 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DKE48_013525 IPR002639 Urease accessory protein UreF DKE48_013525 IPR038277 UreF domain superfamily DKE48_013530 IPR012406 Urease accessory protein UreE DKE48_013530 IPR036118 UreE urease accessory, N-terminal domain superfamily DKE48_013530 IPR007864 Urease accessory protein UreE, C-terminal domain DKE48_013530 IPR036675 UreE, C-terminal domain superfamily DKE48_013530 IPR004029 UreE urease accessory, N-terminal DKE48_013545 IPR036461 Urease, beta subunit superfamily DKE48_013545 IPR002019 Urease, beta subunit DKE48_013550 IPR012010 Urease, gamma subunit DKE48_013550 IPR002026 Urease, gamma/gamma-beta subunit DKE48_013550 IPR036463 Urease, gamma subunit superfamily DKE48_013580 IPR002550 CNNM, transmembrane domain DKE48_013580 IPR000644 CBS domain DKE48_013580 IPR016169 FAD-binding, type PCMH, subdomain 2 DKE48_013580 IPR005170 Transporter-associated domain DKE48_013580 IPR036318 FAD-binding, type PCMH-like superfamily DKE48_013600 IPR011779 Sulphate adenylyltransferase, large subunit DKE48_013600 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_013600 IPR031157 Tr-type G domain, conserved site DKE48_013600 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain DKE48_013600 IPR005225 Small GTP-binding protein domain DKE48_013600 IPR000795 Transcription factor, GTP-binding domain DKE48_013600 IPR002891 Adenylyl-sulfate kinase DKE48_013600 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DKE48_013600 IPR009000 Translation protein, beta-barrel domain superfamily DKE48_013635 IPR024934 Rubredoxin-like domain DKE48_013635 IPR024922 Rubredoxin DKE48_013635 IPR024935 Rubredoxin domain DKE48_013635 IPR018527 Rubredoxin, iron-binding site DKE48_013645 IPR029058 Alpha/Beta hydrolase fold DKE48_013645 IPR000073 Alpha/beta hydrolase fold-1 DKE48_013645 IPR011942 Poly(3-hydroxyalkanoate) depolymerase DKE48_013665 IPR001264 Glycosyl transferase, family 51 DKE48_013665 IPR023346 Lysozyme-like domain superfamily DKE48_013665 IPR036950 Penicillin binding protein transglycosylase domain DKE48_013665 IPR011812 Biosynthetic peptidoglycan transglycosylase DKE48_013690 IPR036874 Carbonic anhydrase superfamily DKE48_013690 IPR001765 Carbonic anhydrase DKE48_013690 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DKE48_013705 IPR039426 Vitamin B12 transporter BtuB-like DKE48_013705 IPR012910 TonB-dependent receptor, plug domain DKE48_013705 IPR037066 TonB-dependent receptor, plug domain superfamily DKE48_013705 IPR010105 TonB-dependent siderophore receptor DKE48_013705 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DKE48_013705 IPR000531 TonB-dependent receptor-like, beta-barrel DKE48_013705 IPR010917 TonB-dependent receptor, conserved site DKE48_013710 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal DKE48_013710 IPR000361 FeS cluster biogenesis DKE48_013710 IPR017726 Fe/S biogenesis protein NfuA DKE48_013710 IPR034904 Fe-S cluster assembly domain superfamily DKE48_013710 IPR035903 HesB-like domain superfamily DKE48_013725 IPR016187 C-type lectin fold DKE48_013725 IPR005532 Sulfatase-modifying factor enzyme DKE48_013725 IPR042095 Sulfatase-modifying factor enzyme superfamily DKE48_013745 IPR001204 Phosphate transporter DKE48_013785 IPR018062 HTH domain AraC-type, conserved site DKE48_013785 IPR013096 Cupin 2, conserved barrel DKE48_013785 IPR009057 Homeobox-like domain superfamily DKE48_013785 IPR018060 DNA binding HTH domain, AraC-type DKE48_013785 IPR014710 RmlC-like jelly roll fold DKE48_013785 IPR011051 RmlC-like cupin domain superfamily DKE48_013790 IPR002645 STAS domain DKE48_013790 IPR036513 STAS domain superfamily DKE48_013790 IPR015868 Glutaminase DKE48_013790 IPR012338 Beta-lactamase/transpeptidase-like DKE48_013815 IPR015590 Aldehyde dehydrogenase domain DKE48_013815 IPR011264 Betaine aldehyde dehydrogenase DKE48_013815 IPR016162 Aldehyde dehydrogenase, N-terminal DKE48_013815 IPR016161 Aldehyde/histidinol dehydrogenase DKE48_013815 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DKE48_013815 IPR016160 Aldehyde dehydrogenase, cysteine active site DKE48_013815 IPR016163 Aldehyde dehydrogenase, C-terminal DKE48_013825 IPR036291 NAD(P)-binding domain superfamily DKE48_013825 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_013825 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_013850 IPR017626 2,3-dihydroxybiphenyl 1,2-dioxygenase DKE48_013850 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DKE48_013850 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DKE48_013850 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II DKE48_013850 IPR037523 Vicinal oxygen chelate (VOC) domain DKE48_013855 IPR036291 NAD(P)-binding domain superfamily DKE48_013855 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_013855 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE48_013875 IPR029016 GAF-like domain superfamily DKE48_013875 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_013875 IPR005471 Transcription regulator IclR, N-terminal DKE48_013875 IPR014757 Transcription regulator IclR, C-terminal DKE48_013875 IPR036390 Winged helix DNA-binding domain superfamily DKE48_013900 IPR022852 Carnitinyl-CoA dehydratase DKE48_013900 IPR029045 ClpP/crotonase-like domain superfamily DKE48_013900 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE48_013900 IPR001753 Enoyl-CoA hydratase/isomerase DKE48_013900 IPR014748 Enoyl-CoA hydratase, C-terminal DKE48_013920 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DKE48_013935 IPR001991 Sodium:dicarboxylate symporter DKE48_013935 IPR023954 C4-dicarboxylate transport protein DKE48_013935 IPR018107 Sodium:dicarboxylate symporter, conserved site DKE48_013935 IPR036458 Sodium:dicarboxylate symporter superfamily DKE48_013950 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase DKE48_013950 IPR029069 HotDog domain superfamily DKE48_013950 IPR006683 Thioesterase domain DKE48_013950 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain DKE48_014020 IPR020624 Schiff base-forming aldolase, conserved site DKE48_014020 IPR020625 Schiff base-forming aldolase, active site DKE48_014020 IPR002220 DapA-like DKE48_014020 IPR013785 Aldolase-type TIM barrel DKE48_014140 IPR029055 Nucleophile aminohydrolases, N-terminal DKE48_014140 IPR000101 Gamma-glutamyltranspeptidase DKE48_014150 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DKE48_014155 IPR006683 Thioesterase domain DKE48_014155 IPR003736 Phenylacetic acid degradation-related domain DKE48_014155 IPR029069 HotDog domain superfamily DKE48_014160 IPR013785 Aldolase-type TIM barrel DKE48_014160 IPR001731 Delta-aminolevulinic acid dehydratase DKE48_014160 IPR030656 Delta-aminolevulinic acid dehydratase, active site DKE48_014165 IPR006076 FAD dependent oxidoreductase DKE48_014165 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_014165 IPR012727 Glycine oxidase ThiO DKE48_014205 IPR011078 Pyridoxal phosphate homeostasis protein DKE48_014205 IPR029066 PLP-binding barrel DKE48_014205 IPR001608 Alanine racemase, N-terminal DKE48_014215 IPR003593 AAA+ ATPase domain DKE48_014215 IPR006321 Pilus retraction protein PilT DKE48_014215 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_014215 IPR001482 Type II/IV secretion system protein DKE48_014220 IPR002481 Ferric-uptake regulator DKE48_014220 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_014220 IPR036390 Winged helix DNA-binding domain superfamily DKE48_014225 IPR007450 Lipoprotein SmpA/OmlA DKE48_014225 IPR026592 Outer membrane protein assembly factor BamE DKE48_014225 IPR037873 BamE-like DKE48_014230 IPR005346 RnfH protein DKE48_014230 IPR037021 RnfH superfamily DKE48_014230 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DKE48_014245 IPR012827 Haemerythrin, metal-binding domain DKE48_014245 IPR035938 Hemerythrin-like superfamily DKE48_014245 IPR023504 Bacteriohemerythrin-like protein DKE48_014245 IPR016131 Haemerythrin, iron-binding site DKE48_014245 IPR012312 Haemerythrin-like DKE48_014270 IPR036157 dUTPase-like superfamily DKE48_014270 IPR029054 dUTPase-like DKE48_014270 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase DKE48_014270 IPR033704 dUTPase, trimeric DKE48_014280 IPR036737 OmpA-like domain superfamily DKE48_014280 IPR006690 Outer membrane protein, OmpA-like, conserved site DKE48_014280 IPR006665 OmpA-like domain DKE48_014280 IPR006664 Outer membrane protein, bacterial DKE48_014280 IPR039567 Glycine zipper domain DKE48_014335 IPR016181 Acyl-CoA N-acyltransferase DKE48_014335 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal DKE48_014335 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase DKE48_014340 IPR007471 N-end aminoacyl transferase, N-terminal DKE48_014340 IPR016181 Acyl-CoA N-acyltransferase DKE48_014340 IPR017138 Aspartate/glutamate leucyltransferase DKE48_014340 IPR030700 N-end rule aminoacyl transferase DKE48_014340 IPR007472 N-end rule aminoacyl transferase, C-terminal DKE48_014345 IPR006464 N-acetyltransferase RimI/Ard1 DKE48_014345 IPR016181 Acyl-CoA N-acyltransferase DKE48_014345 IPR000182 GNAT domain DKE48_014360 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DKE48_014360 IPR009000 Translation protein, beta-barrel domain superfamily DKE48_014360 IPR000795 Transcription factor, GTP-binding domain DKE48_014360 IPR005225 Small GTP-binding protein domain DKE48_014360 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_014360 IPR031157 Tr-type G domain, conserved site DKE48_014360 IPR033720 Elongation factor Tu, domain 2 DKE48_014360 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain DKE48_014360 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DKE48_014360 IPR004161 Translation elongation factor EFTu-like, domain 2 DKE48_014360 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DKE48_014385 IPR016039 Thiolase-like DKE48_014385 IPR000794 Beta-ketoacyl synthase DKE48_014385 IPR018201 Beta-ketoacyl synthase, active site DKE48_014385 IPR014031 Beta-ketoacyl synthase, C-terminal DKE48_014385 IPR014030 Beta-ketoacyl synthase, N-terminal DKE48_014385 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DKE48_014395 IPR008778 Pirin, C-terminal domain DKE48_014395 IPR014710 RmlC-like jelly roll fold DKE48_014395 IPR011051 RmlC-like cupin domain superfamily DKE48_014395 IPR012093 Pirin DKE48_014395 IPR003829 Pirin, N-terminal domain DKE48_014405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_014405 IPR000132 Nitrilase/cyanide hydratase, conserved site DKE48_014405 IPR022310 NAD/GMP synthase DKE48_014405 IPR003694 NAD(+) synthetase DKE48_014405 IPR036526 Carbon-nitrogen hydrolase superfamily DKE48_014405 IPR003010 Carbon-nitrogen hydrolase DKE48_014405 IPR014445 Glutamine-dependent NAD(+) synthetase DKE48_014430 IPR010102 Succinate semialdehyde dehydrogenase DKE48_014430 IPR015590 Aldehyde dehydrogenase domain DKE48_014430 IPR016162 Aldehyde dehydrogenase, N-terminal DKE48_014430 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DKE48_014430 IPR016160 Aldehyde dehydrogenase, cysteine active site DKE48_014430 IPR016163 Aldehyde dehydrogenase, C-terminal DKE48_014430 IPR016161 Aldehyde/histidinol dehydrogenase DKE48_014450 IPR024084 Isopropylmalate dehydrogenase-like domain DKE48_014450 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DKE48_014450 IPR011829 Tartrate dehydrogenase DKE48_014475 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DKE48_014475 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DKE48_014480 IPR004821 Cytidyltransferase-like domain DKE48_014480 IPR001980 Phosphopantetheine adenylyltransferase DKE48_014480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_014485 IPR023620 Small protein B DKE48_014485 IPR020081 SsrA-binding protein, conserved site DKE48_014485 IPR000037 SsrA-binding protein DKE48_014505 IPR017689 Outer membrane protein assembly factor BamD DKE48_014505 IPR011990 Tetratricopeptide-like helical domain superfamily DKE48_014505 IPR039565 Outer membrane lipoprotein BamD-like DKE48_014525 IPR029046 Lipoprotein localisation LolA/LolB/LppX DKE48_014525 IPR004565 Outer membrane lipoprotein LolB DKE48_014555 IPR029057 Phosphoribosyltransferase-like DKE48_014555 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type DKE48_014555 IPR005946 Ribose-phosphate pyrophosphokinase DKE48_014555 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain DKE48_014555 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site DKE48_014555 IPR000836 Phosphoribosyltransferase domain DKE48_014560 IPR020055 Ribosomal protein L25, short-form DKE48_014560 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DKE48_014560 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DKE48_014560 IPR029751 Ribosomal protein L25 DKE48_014585 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DKE48_014585 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB DKE48_014595 IPR034291 Thiamine phosphate synthase DKE48_014595 IPR022998 Thiamine phosphate synthase/TenI DKE48_014595 IPR036206 Thiamin phosphate synthase superfamily DKE48_014595 IPR016084 Haem oxygenase-like, multi-helical DKE48_014595 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase DKE48_014595 IPR004305 Thiaminase-2/PQQC DKE48_014595 IPR029056 Ribokinase-like DKE48_014595 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DKE48_014595 IPR013785 Aldolase-type TIM barrel DKE48_014600 IPR018392 LysM domain DKE48_014600 IPR014004 Transport-associated and nodulation domain, bacteria DKE48_014600 IPR007055 BON domain DKE48_014600 IPR036779 LysM domain superfamily DKE48_014605 IPR036736 ACP-like superfamily DKE48_014605 IPR006162 Phosphopantetheine attachment site DKE48_014605 IPR009081 Phosphopantetheine binding ACP domain DKE48_014605 IPR003231 Acyl carrier protein (ACP) DKE48_014620 IPR002677 Ribosomal protein L32p DKE48_014620 IPR011332 Zinc-binding ribosomal protein DKE48_014625 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DKE48_014625 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria DKE48_014630 IPR007411 Elongation factor P hydroxylase DKE48_014635 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DKE48_014635 IPR006070 YrdC-like domain DKE48_014650 IPR020103 Pseudouridine synthase, catalytic domain superfamily DKE48_014650 IPR036986 RNA-binding S4 domain superfamily DKE48_014650 IPR002942 RNA-binding S4 domain DKE48_014650 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DKE48_014650 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DKE48_014650 IPR006145 Pseudouridine synthase, RsuA/RluA DKE48_014650 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DKE48_014655 IPR004472 Dethiobiotin synthase BioD DKE48_014655 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_014665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE48_014665 IPR004839 Aminotransferase, class I/classII DKE48_014665 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DKE48_014665 IPR015424 Pyridoxal phosphate-dependent transferase DKE48_014665 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type DKE48_014665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE48_014670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE48_014670 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB DKE48_014670 IPR006638 Elp3/MiaB/NifB DKE48_014670 IPR015424 Pyridoxal phosphate-dependent transferase DKE48_014670 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA DKE48_014670 IPR010722 Biotin and thiamin synthesis-associated domain DKE48_014670 IPR007197 Radical SAM DKE48_014670 IPR005814 Aminotransferase class-III DKE48_014670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE48_014670 IPR013785 Aldolase-type TIM barrel DKE48_014695 IPR002024 Bacterioferritin DKE48_014695 IPR008331 Ferritin/DPS protein domain DKE48_014695 IPR009078 Ferritin-like superfamily DKE48_014695 IPR009040 Ferritin-like diiron domain DKE48_014695 IPR012347 Ferritin-like DKE48_014720 IPR002781 Transmembrane protein TauE-like DKE48_014730 IPR004619 Type III pantothenate kinase DKE48_014795 IPR035994 Nucleoside phosphorylase superfamily DKE48_014795 IPR000845 Nucleoside phosphorylase domain DKE48_014795 IPR010049 MTA/SAH nucleosidase DKE48_014800 IPR019591 Mrp/NBP35 ATP-binding protein DKE48_014800 IPR000808 Mrp, conserved site DKE48_014800 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_014800 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DKE48_014800 IPR034904 Fe-S cluster assembly domain superfamily DKE48_014885 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DKE48_014885 IPR017927 FAD-binding domain, ferredoxin reductase-type DKE48_014885 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DKE48_014885 IPR017938 Riboflavin synthase-like beta-barrel DKE48_014885 IPR001433 Oxidoreductase FAD/NAD(P)-binding DKE48_014885 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DKE48_014885 IPR033892 Ferredoxin--NADP reductase, bacteria DKE48_014890 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_014890 IPR005119 LysR, substrate-binding DKE48_014890 IPR000847 Transcription regulator HTH, LysR DKE48_014890 IPR036390 Winged helix DNA-binding domain superfamily DKE48_014900 IPR012340 Nucleic acid-binding, OB-fold DKE48_014900 IPR002059 Cold-shock protein, DNA-binding DKE48_014900 IPR019844 Cold-shock (CSD) domain DKE48_014900 IPR011129 Cold shock domain DKE48_014900 IPR012156 Cold shock, CspA DKE48_014910 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DKE48_014910 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 DKE48_014915 IPR010227 NADH-quinone oxidoreductase, chain M/4 DKE48_014915 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DKE48_014915 IPR003918 NADH:ubiquinone oxidoreductase DKE48_014920 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 DKE48_014920 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DKE48_014920 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal DKE48_014920 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup DKE48_014925 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DKE48_014925 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K DKE48_014930 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ DKE48_014930 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 DKE48_014990 IPR011006 CheY-like superfamily DKE48_014990 IPR001867 OmpR/PhoB-type DNA-binding domain DKE48_014990 IPR016032 Signal transduction response regulator, C-terminal effector DKE48_014990 IPR001789 Signal transduction response regulator, receiver domain DKE48_014990 IPR039420 Transcriptional regulatory protein WalR-like DKE48_014990 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_015025 IPR031409 Darcynin DKE48_015065 IPR009057 Homeobox-like domain superfamily DKE48_015065 IPR001647 DNA-binding HTH domain, TetR-type DKE48_015065 IPR032551 HTH-type transcriptional repressor, C-terminal DKE48_015065 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DKE48_015075 IPR002563 Flavin reductase like domain DKE48_015075 IPR019917 FMN reductase (NADH) RutF DKE48_015075 IPR012349 FMN-binding split barrel DKE48_015095 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_015095 IPR005119 LysR, substrate-binding DKE48_015095 IPR036390 Winged helix DNA-binding domain superfamily DKE48_015095 IPR000847 Transcription regulator HTH, LysR DKE48_015115 IPR005119 LysR, substrate-binding DKE48_015115 IPR036390 Winged helix DNA-binding domain superfamily DKE48_015115 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_015115 IPR000847 Transcription regulator HTH, LysR DKE48_015125 IPR011031 Multihaem cytochrome DKE48_015125 IPR010960 Flavocytochrome c DKE48_015125 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_015125 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DKE48_015125 IPR036280 Multiheme cytochrome superfamily DKE48_015125 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DKE48_015125 IPR012286 Tetrahaem cytochrome domain DKE48_015140 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE48_015140 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DKE48_015140 IPR009057 Homeobox-like domain superfamily DKE48_015140 IPR001647 DNA-binding HTH domain, TetR-type DKE48_015140 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal DKE48_015145 IPR023606 CoA-transferase family III domain superfamily DKE48_015145 IPR003673 CoA-transferase family III DKE48_015160 IPR036390 Winged helix DNA-binding domain superfamily DKE48_015160 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_015160 IPR000847 Transcription regulator HTH, LysR DKE48_015160 IPR005119 LysR, substrate-binding DKE48_015165 IPR020843 Polyketide synthase, enoylreductase domain DKE48_015165 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DKE48_015165 IPR013154 Alcohol dehydrogenase, N-terminal DKE48_015165 IPR011032 GroES-like superfamily DKE48_015165 IPR036291 NAD(P)-binding domain superfamily DKE48_015165 IPR013149 Alcohol dehydrogenase, C-terminal DKE48_015195 IPR023513 Quinolinate synthase A, type 1 DKE48_015195 IPR036094 Quinolinate synthetase A superfamily DKE48_015195 IPR003473 Quinolinate synthetase A DKE48_015200 IPR042195 ArgJ beta chain, C-terminal domain DKE48_015200 IPR002813 Arginine biosynthesis protein ArgJ DKE48_015200 IPR016117 ArgJ-like domain superfamily DKE48_015205 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DKE48_015205 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DKE48_015205 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DKE48_015205 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DKE48_015205 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_015205 IPR023546 Methylated-DNA--protein-cysteine methyltransferase DKE48_015205 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DKE48_015210 IPR000390 Small multidrug resistance protein family DKE48_015240 IPR026019 Ribulose-phosphate 3-epimerase DKE48_015240 IPR000056 Ribulose-phosphate 3-epimerase-like DKE48_015240 IPR011060 Ribulose-phosphate binding barrel DKE48_015240 IPR013785 Aldolase-type TIM barrel DKE48_015260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_015260 IPR007536 Ribosomal RNA small subunit methyltransferase J DKE48_015265 IPR000905 Gcp-like domain DKE48_015265 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB DKE48_015270 IPR011004 Trimeric LpxA-like superfamily DKE48_015270 IPR001451 Hexapeptide repeat DKE48_015275 IPR023735 Uncharacterised nudix hydrolase NudL DKE48_015275 IPR000086 NUDIX hydrolase domain DKE48_015275 IPR015797 NUDIX hydrolase-like domain superfamily DKE48_015275 IPR000059 NUDIX hydrolase, NudL, conserved site DKE48_015320 IPR006805 Anthranilate synthase component I, N-terminal DKE48_015320 IPR019999 Anthranilate synthase component I-like DKE48_015320 IPR005801 ADC synthase DKE48_015320 IPR005802 Aminodeoxychorismate synthase, component I DKE48_015320 IPR015890 Chorismate-utilising enzyme, C-terminal DKE48_015335 IPR013820 ATP phosphoribosyltransferase, catalytic domain DKE48_015335 IPR001348 ATP phosphoribosyltransferase HisG DKE48_015335 IPR018198 ATP phosphoribosyltransferase, conserved site DKE48_015335 IPR024893 ATP phosphoribosyltransferase HisG, short form DKE48_015350 IPR036567 Ribosome hibernation promotion factor-like DKE48_015350 IPR003489 Ribosome hibernation promoting factor/RaiA DKE48_015400 IPR001110 Uncharacterised protein family UPF0012, conserved site DKE48_015400 IPR003010 Carbon-nitrogen hydrolase DKE48_015400 IPR036526 Carbon-nitrogen hydrolase superfamily DKE48_015415 IPR015946 K homology domain-like, alpha/beta DKE48_015415 IPR019953 Organic hydroperoxide resistance protein famiy DKE48_015415 IPR003718 OsmC/Ohr family DKE48_015415 IPR036102 OsmC/Ohr superfamily DKE48_015445 IPR003425 CCB3/YggT DKE48_015450 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DKE48_015450 IPR036291 NAD(P)-binding domain superfamily DKE48_015450 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DKE48_015450 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain DKE48_015450 IPR000304 Pyrroline-5-carboxylate reductase DKE48_015465 IPR022371 Exopolyphosphatase DKE48_015465 IPR003695 Ppx/GppA phosphatase DKE48_015465 IPR030673 Pyrophosphatase, GppA/Ppx-type DKE48_015470 IPR017937 Thioredoxin, conserved site DKE48_015470 IPR005746 Thioredoxin DKE48_015470 IPR036249 Thioredoxin-like superfamily DKE48_015470 IPR013766 Thioredoxin domain DKE48_015475 IPR011113 Rho termination factor, RNA-binding domain DKE48_015475 IPR036269 Rho termination factor, N-terminal domain superfamily DKE48_015475 IPR003593 AAA+ ATPase domain DKE48_015475 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DKE48_015475 IPR011129 Cold shock domain DKE48_015475 IPR012340 Nucleic acid-binding, OB-fold DKE48_015475 IPR004665 Transcription termination factor Rho DKE48_015475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_015475 IPR041703 Transcription termination factor Rho, ATP binding domain DKE48_015475 IPR011112 Rho termination factor, N-terminal DKE48_015490 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DKE48_015490 IPR020816 Histone-like DNA-binding protein, conserved site DKE48_015490 IPR000119 Histone-like DNA-binding protein DKE48_015490 IPR005684 Integration host factor, alpha subunit DKE48_015500 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit DKE48_015500 IPR006195 Aminoacyl-tRNA synthetase, class II DKE48_015500 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DKE48_015500 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal DKE48_015500 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial DKE48_015500 IPR002319 Phenylalanyl-tRNA synthetase DKE48_015520 IPR005813 Ribosomal protein L20 DKE48_015520 IPR035566 Ribosomal protein L20, C-terminal DKE48_015525 IPR018265 Ribosomal protein L35, conserved site DKE48_015525 IPR001706 Ribosomal protein L35, non-mitochondrial DKE48_015525 IPR021137 Ribosomal protein L35 DKE48_015525 IPR037229 Ribosomal protein L35 superfamily DKE48_015530 IPR036259 MFS transporter superfamily DKE48_015530 IPR020846 Major facilitator superfamily domain DKE48_015530 IPR011701 Major facilitator superfamily DKE48_015545 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily DKE48_015545 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily DKE48_015545 IPR001288 Translation initiation factor 3 DKE48_015545 IPR019815 Translation initiation factor 3, C-terminal DKE48_015545 IPR019814 Translation initiation factor 3, N-terminal DKE48_015560 IPR023153 PSPTO4464-like domain superfamily DKE48_015560 IPR006839 Ribosome-associated, YjgA DKE48_015565 IPR000032 Phosphocarrier protein HPr-like DKE48_015565 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DKE48_015565 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DKE48_015565 IPR035895 HPr-like superfamily DKE48_015580 IPR003700 Ketopantoate hydroxymethyltransferase DKE48_015580 IPR040442 Pyruvate kinase-like domain superfamily DKE48_015580 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DKE48_015595 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DKE48_015595 IPR010994 RuvA domain 2-like DKE48_015600 IPR011551 NTP pyrophosphohydrolase MazG DKE48_015600 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DKE48_015625 IPR005858 Cysteine synthase CysM DKE48_015625 IPR005856 Cysteine synthase DKE48_015625 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DKE48_015625 IPR001926 Pyridoxal-phosphate dependent enzyme DKE48_015625 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site DKE48_015630 IPR005467 Histidine kinase domain DKE48_015630 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DKE48_015630 IPR001789 Signal transduction response regulator, receiver domain DKE48_015630 IPR019247 Histidine kinase BarA, N-terminal DKE48_015630 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DKE48_015630 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DKE48_015630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE48_015630 IPR003594 Histidine kinase/HSP90-like ATPase DKE48_015630 IPR011006 CheY-like superfamily DKE48_015630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DKE48_015630 IPR036641 HPT domain superfamily DKE48_015630 IPR003660 HAMP domain DKE48_015635 IPR029045 ClpP/crotonase-like domain superfamily DKE48_015635 IPR001753 Enoyl-CoA hydratase/isomerase DKE48_015635 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE48_015640 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DKE48_015640 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DKE48_015640 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DKE48_015640 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DKE48_015640 IPR036291 NAD(P)-binding domain superfamily DKE48_015640 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DKE48_015640 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DKE48_015650 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DKE48_015665 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal DKE48_015670 IPR036291 NAD(P)-binding domain superfamily DKE48_015670 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 DKE48_015670 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DKE48_015670 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 DKE48_015670 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DKE48_015685 IPR011701 Major facilitator superfamily DKE48_015685 IPR020846 Major facilitator superfamily domain DKE48_015685 IPR036259 MFS transporter superfamily DKE48_015700 IPR036390 Winged helix DNA-binding domain superfamily DKE48_015700 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_015700 IPR005119 LysR, substrate-binding DKE48_015700 IPR000847 Transcription regulator HTH, LysR DKE48_015720 IPR032466 Metal-dependent hydrolase DKE48_015720 IPR001130 TatD family DKE48_015720 IPR018228 Deoxyribonuclease, TatD-related, conserved site DKE48_015720 IPR015991 Uncharacterised hydrolase TatD-type DKE48_015770 IPR004789 Acetolactate synthase, small subunit DKE48_015770 IPR019455 Acetolactate synthase, small subunit, C-terminal DKE48_015770 IPR002912 ACT domain DKE48_015770 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DKE48_015770 IPR039557 AHAS, ACT domain DKE48_015790 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DKE48_015790 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE48_015790 IPR002300 Aminoacyl-tRNA synthetase, class Ia DKE48_015790 IPR002302 Leucine-tRNA ligase DKE48_015790 IPR025709 Leucyl-tRNA synthetase, editing domain DKE48_015790 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DKE48_015790 IPR015413 Methionyl/Leucyl tRNA synthetase DKE48_015790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_015790 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DKE48_015795 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DKE48_015795 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DKE48_015795 IPR002302 Leucine-tRNA ligase DKE48_015795 IPR025709 Leucyl-tRNA synthetase, editing domain DKE48_015795 IPR015413 Methionyl/Leucyl tRNA synthetase DKE48_015795 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DKE48_015795 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE48_015795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_015795 IPR002300 Aminoacyl-tRNA synthetase, class Ia DKE48_015800 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DKE48_015800 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DKE48_015800 IPR015413 Methionyl/Leucyl tRNA synthetase DKE48_015800 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DKE48_015800 IPR025709 Leucyl-tRNA synthetase, editing domain DKE48_015800 IPR002302 Leucine-tRNA ligase DKE48_015800 IPR002300 Aminoacyl-tRNA synthetase, class Ia DKE48_015800 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE48_015800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_015805 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DKE48_015805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_015805 IPR015413 Methionyl/Leucyl tRNA synthetase DKE48_015805 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DKE48_015805 IPR025709 Leucyl-tRNA synthetase, editing domain DKE48_015805 IPR002302 Leucine-tRNA ligase DKE48_015805 IPR002300 Aminoacyl-tRNA synthetase, class Ia DKE48_015805 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE48_015805 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DKE48_015810 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DKE48_015810 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DKE48_015810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE48_015810 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DKE48_015810 IPR015413 Methionyl/Leucyl tRNA synthetase DKE48_015810 IPR002302 Leucine-tRNA ligase DKE48_015810 IPR002300 Aminoacyl-tRNA synthetase, class Ia DKE48_015810 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE48_015810 IPR025709 Leucyl-tRNA synthetase, editing domain DKE48_015835 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DKE48_015835 IPR003423 Outer membrane efflux protein DKE48_015850 IPR022894 Oligoribonuclease DKE48_015850 IPR036397 Ribonuclease H superfamily DKE48_015850 IPR012337 Ribonuclease H-like superfamily DKE48_015850 IPR013520 Exonuclease, RNase T/DNA polymerase III DKE48_015855 IPR010914 RsgA GTPase domain DKE48_015855 IPR004881 Ribosome biogenesis GTPase RsgA DKE48_015855 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_015855 IPR012340 Nucleic acid-binding, OB-fold DKE48_015855 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain DKE48_015865 IPR036249 Thioredoxin-like superfamily DKE48_015865 IPR011767 Glutaredoxin active site DKE48_015865 IPR011900 Glutaredoxin, GrxC DKE48_015865 IPR014025 Glutaredoxin subgroup DKE48_015865 IPR002109 Glutaredoxin DKE48_015870 IPR003708 Bacterial protein export chaperone SecB DKE48_015870 IPR035958 SecB-like superfamily DKE48_015885 IPR016039 Thiolase-like DKE48_015885 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DKE48_015885 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 DKE48_015885 IPR000794 Beta-ketoacyl synthase DKE48_015885 IPR018201 Beta-ketoacyl synthase, active site DKE48_015885 IPR014031 Beta-ketoacyl synthase, C-terminal DKE48_015885 IPR014030 Beta-ketoacyl synthase, N-terminal DKE48_015890 IPR002347 Short-chain dehydrogenase/reductase SDR DKE48_015890 IPR036291 NAD(P)-binding domain superfamily DKE48_015890 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative DKE48_015940 IPR001173 Glycosyltransferase 2-like DKE48_015940 IPR029044 Nucleotide-diphospho-sugar transferases DKE48_015940 IPR039528 DPM1-like DKE48_015965 IPR017687 Outer membrane protein assembly factor BamB DKE48_015965 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DKE48_015965 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DKE48_015965 IPR002372 Pyrrolo-quinoline quinone repeat DKE48_015965 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DKE48_015995 IPR027492 Dual-specificity RNA methyltransferase RlmN DKE48_015995 IPR040072 Methyltransferase (Class A) DKE48_015995 IPR007197 Radical SAM DKE48_015995 IPR013785 Aldolase-type TIM barrel DKE48_015995 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr DKE48_016000 IPR034907 Nucleoside diphosphate kinase-like domain DKE48_016000 IPR036850 Nucleoside diphosphate kinase-like domain superfamily DKE48_016000 IPR001564 Nucleoside diphosphate kinase DKE48_016000 IPR023005 Nucleoside diphosphate kinase, active site DKE48_016005 IPR036762 IscX-like superfamily DKE48_016005 IPR007479 ISC system FeS cluster assembly, IscX DKE48_016010 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DKE48_016010 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DKE48_016040 IPR016163 Aldehyde dehydrogenase, C-terminal DKE48_016040 IPR016161 Aldehyde/histidinol dehydrogenase DKE48_016040 IPR015590 Aldehyde dehydrogenase domain DKE48_016040 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site DKE48_016040 IPR000965 GPR domain DKE48_016040 IPR016162 Aldehyde dehydrogenase, N-terminal DKE48_016040 IPR012134 Glutamate-5-semialdehyde dehydrogenase DKE48_016050 IPR006001 Carbohydrate kinase, thermoresistant glucokinase DKE48_016050 IPR031322 Shikimate kinase/gluconokinase DKE48_016050 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_016055 IPR003474 Gluconate transporter DKE48_016060 IPR031338 KDPG/KHG aldolase, active site 2 DKE48_016060 IPR000887 KDPG/KHG aldolase DKE48_016060 IPR013785 Aldolase-type TIM barrel DKE48_016060 IPR031337 KDPG/KHG aldolase, active site 1 DKE48_016100 IPR001907 ATP-dependent Clp protease proteolytic subunit DKE48_016100 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DKE48_016100 IPR033135 ClpP, histidine active site DKE48_016100 IPR029045 ClpP/crotonase-like domain superfamily DKE48_016100 IPR018215 ClpP, Ser active site DKE48_016115 IPR006620 Prolyl 4-hydroxylase, alpha subunit DKE48_016115 IPR023550 PKHD-type hydroxylase DKE48_016115 IPR041097 PKHD-type hydroxylase C-terminal domain DKE48_016115 IPR005123 Oxoglutarate/iron-dependent dioxygenase DKE48_016120 IPR000891 Pyruvate carboxyltransferase DKE48_016120 IPR005668 2-isopropylmalate synthase DKE48_016120 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site DKE48_016120 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily DKE48_016120 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain DKE48_016120 IPR013785 Aldolase-type TIM barrel DKE48_016120 IPR039371 LeuA, N-terminal catalytic TIM barrel domain DKE48_016130 IPR000073 Alpha/beta hydrolase fold-1 DKE48_016130 IPR008220 Homoserine/serine acetyltransferase MetX-like DKE48_016130 IPR010743 Methionine biosynthesis MetW DKE48_016130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_016130 IPR029058 Alpha/Beta hydrolase fold DKE48_016140 IPR029001 Inosine triphosphate pyrophosphatase-like DKE48_016140 IPR002637 Ham1-like protein DKE48_016140 IPR020922 dITP/XTP pyrophosphatase DKE48_016155 IPR003369 Sec-independent protein translocase protein TatA/B/E DKE48_016155 IPR018448 Twin-arginine translocation protein TatB DKE48_016195 IPR000398 Thymidylate synthase DKE48_016195 IPR020940 Thymidylate synthase, active site DKE48_016195 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily DKE48_016195 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain DKE48_016200 IPR024072 Dihydrofolate reductase-like domain superfamily DKE48_016200 IPR012259 Dihydrofolate reductase DKE48_016200 IPR001796 Dihydrofolate reductase domain DKE48_016200 IPR017925 Dihydrofolate reductase conserved site DKE48_016220 IPR003400 Biopolymer transport protein ExbD/TolR DKE48_016225 IPR002898 MotA/TolQ/ExbB proton channel DKE48_016235 IPR002912 ACT domain DKE48_016235 IPR002376 Formyl transferase, N-terminal DKE48_016235 IPR036477 Formyl transferase, N-terminal domain superfamily DKE48_016235 IPR004810 Formyltetrahydrofolate deformylase DKE48_016235 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain DKE48_016250 IPR037147 Ribosomal protein L28/L24 superfamily DKE48_016250 IPR026569 Ribosomal protein L28/L24 DKE48_016250 IPR034704 L28p-like DKE48_016250 IPR001383 Ribosomal protein L28 DKE48_016310 IPR002577 Helix-turn-helix, HxlR type DKE48_016310 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_016310 IPR036390 Winged helix DNA-binding domain superfamily DKE48_016320 IPR007236 SlyX DKE48_016340 IPR004960 Bacterial lipid A biosynthesis acyltransferase DKE48_016340 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase DKE48_016380 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain DKE48_016380 IPR001406 Pseudouridine synthase I, TruA DKE48_016380 IPR020103 Pseudouridine synthase, catalytic domain superfamily DKE48_016380 IPR020095 Pseudouridine synthase I, TruA, C-terminal DKE48_016390 IPR006196 RNA-binding domain, S1, IF1 type DKE48_016390 IPR012340 Nucleic acid-binding, OB-fold DKE48_016390 IPR022967 RNA-binding domain, S1 DKE48_016390 IPR004368 Translation initiation factor IF-1 DKE48_016420 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain DKE48_016420 IPR004430 3-isopropylmalate dehydratase, large subunit DKE48_016420 IPR018136 Aconitase family, 4Fe-4S cluster binding site DKE48_016420 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 DKE48_016420 IPR033941 3-Isopropylmalate dehydratase, catalytic domain DKE48_016420 IPR036008 Aconitase, iron-sulfur domain DKE48_016430 IPR000847 Transcription regulator HTH, LysR DKE48_016430 IPR036390 Winged helix DNA-binding domain superfamily DKE48_016430 IPR005119 LysR, substrate-binding DKE48_016430 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_016455 IPR015797 NUDIX hydrolase-like domain superfamily DKE48_016455 IPR020084 NUDIX hydrolase, conserved site DKE48_016455 IPR000086 NUDIX hydrolase domain DKE48_016455 IPR022927 RNA pyrophosphohydrolase RppH DKE48_016455 IPR020476 NUDIX hydrolase DKE48_016470 IPR001279 Metallo-beta-lactamase DKE48_016470 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D DKE48_016470 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE48_016475 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain DKE48_016475 IPR005119 LysR, substrate-binding DKE48_016475 IPR000847 Transcription regulator HTH, LysR DKE48_016475 IPR036390 Winged helix DNA-binding domain superfamily DKE48_016475 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_016495 IPR010987 Glutathione S-transferase, C-terminal-like DKE48_016495 IPR004045 Glutathione S-transferase, N-terminal DKE48_016495 IPR036249 Thioredoxin-like superfamily DKE48_016495 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DKE48_016495 IPR040079 Glutathione Transferase family DKE48_016500 IPR001034 DeoR-type HTH domain DKE48_016500 IPR013196 Helix-turn-helix, type 11 DKE48_016500 IPR026881 WYL domain DKE48_016500 IPR036390 Winged helix DNA-binding domain superfamily DKE48_016500 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_016500 IPR028349 Protein PafC DKE48_016570 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE48_016570 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE48_016570 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE48_016570 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DKE48_016570 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE48_016580 IPR034704 L28p-like DKE48_016580 IPR042105 Ribosomal protein L31 superfamily DKE48_016580 IPR027493 Ribosomal protein L31 type B DKE48_016580 IPR002150 Ribosomal protein L31 DKE48_016595 IPR003691 Putative fluoride ion transporter CrcB DKE48_016615 IPR013088 Zinc finger, NHR/GATA-type DKE48_016615 IPR005584 DNA gyrase inhibitor YacG DKE48_016620 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE48_016620 IPR001279 Metallo-beta-lactamase DKE48_016635 IPR001920 Asp/Glu racemase DKE48_016635 IPR018187 Asp/Glu racemase, active site 1 DKE48_016635 IPR004391 Glutamate racemase DKE48_016635 IPR033134 Asp/Glu racemase, active site 2 DKE48_016635 IPR015942 Asp/Glu/hydantoin racemase DKE48_016655 IPR022931 Sulfur carrier protein TusA DKE48_016655 IPR036868 TusA-like domain superfamily DKE48_016655 IPR001455 TusA-like domain DKE48_016660 IPR005170 Transporter-associated domain DKE48_016660 IPR036318 FAD-binding, type PCMH-like superfamily DKE48_016660 IPR000644 CBS domain DKE48_016660 IPR016169 FAD-binding, type PCMH, subdomain 2 DKE48_016665 IPR036526 Carbon-nitrogen hydrolase superfamily DKE48_016665 IPR003010 Carbon-nitrogen hydrolase DKE48_016665 IPR004563 Apolipoprotein N-acyltransferase DKE48_016705 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DKE48_016705 IPR016154 Heat shock protein Hsp33, C-terminal DKE48_016705 IPR000397 Heat shock protein Hsp33 DKE48_016705 IPR016153 Heat shock protein Hsp33, N-terminal DKE48_016720 IPR022835 Chaperone modulatory protein CbpM DKE48_016725 IPR004488 Magnesium/cobalt transport protein CorA DKE48_016725 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB DKE48_016735 IPR005290 Ribosomal protein S15, bacterial-type DKE48_016735 IPR009068 S15/NS1, RNA-binding DKE48_016735 IPR000589 Ribosomal protein S15 DKE48_016780 IPR023576 UbiE/COQ5 methyltransferase, conserved site DKE48_016780 IPR004033 UbiE/COQ5 methyltransferase DKE48_016780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_016795 IPR002938 FAD-binding domain DKE48_016795 IPR036188 FAD/NAD(P)-binding domain superfamily DKE48_016820 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DKE48_016820 IPR006673 Mnh complex subunit C1 DKE48_016835 IPR007208 Na(+)/H(+) antiporter subunit F-like DKE48_016860 IPR035956 RimP, N-terminal domain superfamily DKE48_016860 IPR003728 Ribosome maturation factor RimP DKE48_016860 IPR028998 Ribosome maturation factor RimP, C-terminal DKE48_016860 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DKE48_016860 IPR028989 Ribosome maturation factor RimP, N-terminal DKE48_016880 IPR004692 Preprotein translocase SecG subunit DKE48_016890 IPR001482 Type II/IV secretion system protein DKE48_016890 IPR037257 General secretory system II, protein E, N-terminal superfamily DKE48_016890 IPR007831 General secretory system II, protein E, N-terminal DKE48_016890 IPR042181 Type II secretion system, protein E, N-terminal DKE48_016890 IPR013374 ATPase, type IV, pilus assembly, PilB DKE48_016890 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_016900 IPR014032 Peptidase A24A, prepilin type IV, bacterial DKE48_016900 IPR000045 Prepilin type IV endopeptidase, peptidase domain DKE48_016900 IPR010627 Peptidase A24A, N-terminal DKE48_016905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_016905 IPR001977 Dephospho-CoA kinase DKE48_016915 IPR029028 Alpha/beta knot methyltransferases DKE48_016915 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DKE48_016915 IPR029064 50S ribosomal protein L30e-like DKE48_016915 IPR004441 RNA methyltransferase TrmH family DKE48_016915 IPR001537 tRNA/rRNA methyltransferase, SpoU type DKE48_016915 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKE48_016915 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DKE48_016940 IPR012337 Ribonuclease H-like superfamily DKE48_016940 IPR037027 YqgF/RNase H-like domain superfamily DKE48_016940 IPR006641 YqgF/RNase H-like domain DKE48_016940 IPR005227 Putative pre-16S rRNA nuclease DKE48_016970 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DKE48_016970 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DKE48_016970 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DKE48_016970 IPR018060 DNA binding HTH domain, AraC-type DKE48_016970 IPR009057 Homeobox-like domain superfamily DKE48_016970 IPR016221 Bifunctional regulatory protein Ada DKE48_016970 IPR004026 Ada DNA repair, metal-binding DKE48_016970 IPR035451 Ada-like domain superfamily DKE48_016970 IPR018062 HTH domain AraC-type, conserved site DKE48_016970 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DKE48_016970 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_016970 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DKE48_016975 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase DKE48_016975 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial DKE48_016975 IPR000462 CDP-alcohol phosphatidyltransferase DKE48_017020 IPR020617 Thiolase, C-terminal DKE48_017020 IPR020613 Thiolase, conserved site DKE48_017020 IPR020616 Thiolase, N-terminal DKE48_017020 IPR002155 Thiolase DKE48_017020 IPR020610 Thiolase, active site DKE48_017020 IPR020615 Thiolase, acyl-enzyme intermediate active site DKE48_017020 IPR016039 Thiolase-like DKE48_017020 IPR012805 Acetyl-CoA C-acyltransferase FadA DKE48_017030 IPR029058 Alpha/Beta hydrolase fold DKE48_017030 IPR010662 Putative hydrolase RBBP9/YdeN DKE48_017035 IPR000551 MerR-type HTH domain DKE48_017035 IPR009061 Putative DNA-binding domain superfamily DKE48_017035 IPR011789 Cu(I)-responsive transcriptional regulator DKE48_017035 IPR015358 Transcription regulator MerR, DNA binding DKE48_017080 IPR029058 Alpha/Beta hydrolase fold DKE48_017080 IPR000073 Alpha/beta hydrolase fold-1 DKE48_017080 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase DKE48_017110 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily DKE48_017110 IPR013823 Ribosomal protein L7/L12, C-terminal DKE48_017110 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DKE48_017110 IPR000206 Ribosomal protein L7/L12 DKE48_017110 IPR008932 Ribosomal protein L7/L12, oligomerisation DKE48_017115 IPR022973 Ribosomal protein L10 DKE48_017115 IPR002363 Ribosomal protein L10, eubacterial, conserved site DKE48_017115 IPR001790 Ribosomal protein L10P DKE48_017120 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DKE48_017120 IPR023674 Ribosomal protein L1-like DKE48_017120 IPR002143 Ribosomal protein L1 DKE48_017120 IPR005878 Ribosomal protein L1, bacterial-type DKE48_017120 IPR023673 Ribosomal protein L1, conserved site DKE48_017120 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DKE48_017125 IPR020785 Ribosomal protein L11, conserved site DKE48_017125 IPR000911 Ribosomal protein L11/L12 DKE48_017125 IPR020783 Ribosomal protein L11, C-terminal DKE48_017125 IPR006519 Ribosomal protein L11, bacterial-type DKE48_017125 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DKE48_017125 IPR020784 Ribosomal protein L11, N-terminal DKE48_017125 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DKE48_017130 IPR036735 NusG, N-terminal domain superfamily DKE48_017130 IPR006645 NusG, N-terminal DKE48_017130 IPR014722 Ribosomal protein L2, domain 2 DKE48_017130 IPR001062 Transcription antitermination protein, NusG DKE48_017130 IPR008991 Translation protein SH3-like domain superfamily DKE48_017130 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DKE48_017130 IPR005824 KOW DKE48_017175 IPR006439 HAD hydrolase, subfamily IA DKE48_017175 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DKE48_017175 IPR023214 HAD superfamily DKE48_017175 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic DKE48_017175 IPR037512 Phosphoglycolate phosphatase, prokaryotic DKE48_017175 IPR036412 HAD-like superfamily DKE48_017175 IPR041492 Haloacid dehalogenase-like hydrolase DKE48_017200 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily DKE48_017200 IPR001801 Histone-like protein H-NS DKE48_017200 IPR027444 Histone-like protein H-NS, C-terminal domain DKE48_017225 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily DKE48_017225 IPR022418 Porphobilinogen deaminase, C-terminal DKE48_017225 IPR022417 Porphobilinogen deaminase, N-terminal DKE48_017225 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site DKE48_017225 IPR000860 Porphobilinogen deaminase DKE48_017230 IPR001789 Signal transduction response regulator, receiver domain DKE48_017230 IPR011006 CheY-like superfamily DKE48_017230 IPR007492 LytTR DNA-binding domain DKE48_017245 IPR036766 Fe(II) trafficking protein YggX superfamily DKE48_017245 IPR007457 Fe(II) trafficking protein YggX DKE48_017250 IPR028366 Phosphate transport system protein PhoU DKE48_017250 IPR038078 PhoU-like domain superfamily DKE48_017250 IPR026022 PhoU domain DKE48_017260 IPR004779 Carboxylate/Amino Acid/Amine Transporter DKE48_017260 IPR000620 EamA domain DKE48_017275 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B DKE48_017275 IPR038521 ThiC/Bza superfamily DKE48_017275 IPR025747 ThiC-associated domain DKE48_017275 IPR037509 Phosphomethylpyrimidine synthase DKE48_017285 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA DKE48_017285 IPR029052 Metallo-dependent phosphatase-like DKE48_017285 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DKE48_017290 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DKE48_017290 IPR000962 Zinc finger, DksA/TraR C4-type DKE48_017290 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DKE48_017290 IPR037187 DksA, N-terminal domain superfamily DKE48_017290 IPR012784 RNA polymerase-binding transcription factor DksA DKE48_017325 IPR004107 Integrase, SAM-like, N-terminal DKE48_017325 IPR023009 Tyrosine recombinase XerC/XerD DKE48_017325 IPR011932 Tyrosine recombinase XerD DKE48_017325 IPR011010 DNA breaking-rejoining enzyme, catalytic core DKE48_017325 IPR013762 Integrase-like, catalytic domain superfamily DKE48_017325 IPR002104 Integrase, catalytic domain DKE48_017325 IPR010998 Integrase/recombinase, N-terminal DKE48_017340 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DKE48_017340 IPR026260 Threonine synthase, bacterial/archaeal DKE48_017340 IPR004450 Threonine synthase-like DKE48_017340 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DKE48_017340 IPR001926 Pyridoxal-phosphate dependent enzyme DKE48_017345 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DKE48_017345 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DKE48_017345 IPR012338 Beta-lactamase/transpeptidase-like DKE48_017350 IPR011006 CheY-like superfamily DKE48_017350 IPR001789 Signal transduction response regulator, receiver domain DKE48_017350 IPR016032 Signal transduction response regulator, C-terminal effector DKE48_017350 IPR000792 Transcription regulator LuxR, C-terminal DKE48_017355 IPR005467 Histidine kinase domain DKE48_017355 IPR003594 Histidine kinase/HSP90-like ATPase DKE48_017355 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DKE48_017355 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DKE48_017355 IPR000014 PAS domain DKE48_017355 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DKE48_017355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE48_017365 IPR004447 C-terminal-processing peptidase S41A DKE48_017365 IPR029045 ClpP/crotonase-like domain superfamily DKE48_017365 IPR001478 PDZ domain DKE48_017365 IPR036034 PDZ superfamily DKE48_017365 IPR005151 Tail specific protease DKE48_017370 IPR017850 Alkaline-phosphatase-like, core domain superfamily DKE48_017370 IPR011258 BPG-independent PGAM, N-terminal DKE48_017370 IPR006124 Metalloenzyme DKE48_017370 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily DKE48_017370 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent DKE48_017375 IPR030923 LPS export ABC transporter permease LptG DKE48_017375 IPR005495 Permease LptG/LptF-related DKE48_017420 IPR005144 ATP-cone domain DKE48_017420 IPR003796 Ribonucleotide reductase regulator NrdR-like DKE48_017475 IPR032701 Prokaryotic E2 family B DKE48_017475 IPR035985 Ubiquitin-activating enzyme DKE48_017475 IPR000594 THIF-type NAD/FAD binding fold DKE48_017520 IPR030389 FeoB-type guanine nucleotide-binding (G) domain DKE48_017520 IPR011640 Ferrous iron transport protein B, C-terminal DKE48_017520 IPR003373 Ferrous iron transport protein B DKE48_017520 IPR006073 GTP binding domain DKE48_017520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_017520 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DKE48_017530 IPR027469 Cation efflux transmembrane domain superfamily DKE48_017530 IPR036837 Cation efflux protein, cytoplasmic domain superfamily DKE48_017530 IPR002524 Cation efflux protein DKE48_017535 IPR011794 Hg(II)-responsive transcriptional regulator DKE48_017535 IPR000551 MerR-type HTH domain DKE48_017535 IPR009061 Putative DNA-binding domain superfamily DKE48_017545 IPR006311 Twin-arginine translocation pathway, signal sequence DKE48_017545 IPR008972 Cupredoxin DKE48_017545 IPR034284 Copper resistance protein, first cupredoxin domain DKE48_017545 IPR034282 Copper resistance protein CopA, second cupredoxin domain DKE48_017545 IPR011706 Multicopper oxidase, type 2 DKE48_017545 IPR033138 Multicopper oxidases, conserved site DKE48_017545 IPR034279 Copper resistance protein, third cupredoxin domain DKE48_017545 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DKE48_017545 IPR002355 Multicopper oxidase, copper-binding site DKE48_017545 IPR011707 Multicopper oxidase, type 3 DKE48_017545 IPR006376 Copper-resistance protein CopA DKE48_017545 IPR001117 Multicopper oxidase, type 1 DKE48_017555 IPR001789 Signal transduction response regulator, receiver domain DKE48_017555 IPR039420 Transcriptional regulatory protein WalR-like DKE48_017555 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_017555 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response DKE48_017555 IPR001867 OmpR/PhoB-type DNA-binding domain DKE48_017555 IPR011006 CheY-like superfamily DKE48_017560 IPR003660 HAMP domain DKE48_017560 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DKE48_017560 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DKE48_017560 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DKE48_017560 IPR005467 Histidine kinase domain DKE48_017560 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE48_017560 IPR006290 Heavy metal sensor kinase DKE48_017560 IPR003594 Histidine kinase/HSP90-like ATPase DKE48_017610 IPR004482 Mg chelatase-related protein DKE48_017610 IPR025158 Mg chelatase-related protein, C-terminal domain DKE48_017610 IPR001208 MCM domain DKE48_017610 IPR000523 Magnesium chelatase ChlI domain DKE48_017610 IPR003593 AAA+ ATPase domain DKE48_017610 IPR020568 Ribosomal protein S5 domain 2-type fold DKE48_017610 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_017610 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKE48_017620 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DKE48_017620 IPR001303 Class II aldolase/adducin N-terminal DKE48_017635 IPR023614 Porin domain superfamily DKE48_017635 IPR005318 Outer membrane porin, bacterial DKE48_017665 IPR020846 Major facilitator superfamily domain DKE48_017665 IPR036259 MFS transporter superfamily DKE48_017665 IPR011701 Major facilitator superfamily DKE48_017665 IPR005829 Sugar transporter, conserved site DKE48_017670 IPR005115 Uncharacterised domain UPF0126 DKE48_017675 IPR023006 Uncharacterised protein family UPF0225 DKE48_017675 IPR032710 NTF2-like domain superfamily DKE48_017675 IPR004027 SEC-C motif DKE48_017685 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DKE48_017685 IPR031100 LOG family DKE48_017735 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic DKE48_017735 IPR008254 Flavodoxin/nitric oxide synthase DKE48_017735 IPR029039 Flavoprotein-like superfamily DKE48_017735 IPR010089 Flavoprotein WrbA-like DKE48_017735 IPR005025 NADPH-dependent FMN reductase-like DKE48_017750 IPR005859 Cysteine synthase CysK DKE48_017750 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site DKE48_017750 IPR001926 Pyridoxal-phosphate dependent enzyme DKE48_017750 IPR005856 Cysteine synthase DKE48_017750 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DKE48_017835 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE48_017835 IPR001647 DNA-binding HTH domain, TetR-type DKE48_017835 IPR009057 Homeobox-like domain superfamily DKE48_017860 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit DKE48_017860 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal DKE48_017860 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal DKE48_017860 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily DKE48_017870 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site DKE48_017870 IPR000131 ATP synthase, F1 complex, gamma subunit DKE48_017870 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily DKE48_017875 IPR000793 ATP synthase, alpha subunit, C-terminal DKE48_017875 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily DKE48_017875 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DKE48_017875 IPR005294 ATP synthase, F1 complex, alpha subunit DKE48_017875 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DKE48_017875 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DKE48_017875 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DKE48_017875 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_017875 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain DKE48_017875 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DKE48_017890 IPR000454 ATP synthase, F0 complex, subunit C DKE48_017890 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site DKE48_017890 IPR038662 F1F0 ATP synthase subunit C superfamily DKE48_017890 IPR002379 V-ATPase proteolipid subunit C-like domain DKE48_017890 IPR035921 F/V-ATP synthase subunit C superfamily DKE48_017890 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast DKE48_017895 IPR023011 ATP synthase, F0 complex, subunit A, active site DKE48_017895 IPR000568 ATP synthase, F0 complex, subunit A DKE48_017895 IPR035908 ATP synthase, F0 complex, subunit A superfamily DKE48_017925 IPR001123 Amino acid exporter protein, LeuE-type DKE48_017925 IPR004778 Homoserine/Threonine efflux protein DKE48_017930 IPR006314 Dyp-type peroxidase DKE48_017930 IPR011008 Dimeric alpha-beta barrel DKE48_017960 IPR011051 RmlC-like cupin domain superfamily DKE48_017960 IPR014710 RmlC-like jelly roll fold DKE48_017960 IPR003829 Pirin, N-terminal domain DKE48_017960 IPR012093 Pirin DKE48_017960 IPR008778 Pirin, C-terminal domain DKE48_017970 IPR036390 Winged helix DNA-binding domain superfamily DKE48_017970 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_017970 IPR002481 Ferric-uptake regulator DKE48_017980 IPR000182 GNAT domain DKE48_017980 IPR016181 Acyl-CoA N-acyltransferase DKE48_018000 IPR032818 DedA family DKE48_018000 IPR032816 SNARE associated Golgi protein DKE48_018025 IPR036065 BolA-like superfamily DKE48_018025 IPR002634 BolA protein DKE48_018070 IPR016181 Acyl-CoA N-acyltransferase DKE48_018070 IPR001690 Autoinducer synthase DKE48_018080 IPR001753 Enoyl-CoA hydratase/isomerase DKE48_018080 IPR014748 Enoyl-CoA hydratase, C-terminal DKE48_018080 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE48_018080 IPR029045 ClpP/crotonase-like domain superfamily DKE48_018085 IPR014748 Enoyl-CoA hydratase, C-terminal DKE48_018085 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE48_018085 IPR029045 ClpP/crotonase-like domain superfamily DKE48_018085 IPR001753 Enoyl-CoA hydratase/isomerase DKE48_018095 IPR011957 Benzoate-CoA ligase family DKE48_018095 IPR000873 AMP-dependent synthetase/ligase DKE48_018095 IPR025110 AMP-binding enzyme, C-terminal domain DKE48_018100 IPR025110 AMP-binding enzyme, C-terminal domain DKE48_018100 IPR020845 AMP-binding, conserved site DKE48_018100 IPR000873 AMP-dependent synthetase/ligase DKE48_018100 IPR042099 AMP-dependent synthetase-like superfamily DKE48_018110 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DKE48_018110 IPR011548 3-hydroxyisobutyrate dehydrogenase DKE48_018110 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DKE48_018110 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DKE48_018110 IPR036291 NAD(P)-binding domain superfamily DKE48_018110 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DKE48_018110 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DKE48_018110 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DKE48_018135 IPR006175 YjgF/YER057c/UK114 family DKE48_018135 IPR019897 RidA, conserved site DKE48_018135 IPR035959 RutC-like superfamily DKE48_018135 IPR035709 RutC family, YoaB-like DKE48_018140 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DKE48_018140 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site DKE48_018140 IPR000821 Alanine racemase DKE48_018140 IPR011079 Alanine racemase, C-terminal DKE48_018140 IPR001608 Alanine racemase, N-terminal DKE48_018140 IPR029066 PLP-binding barrel DKE48_018150 IPR019888 Transcription regulator AsnC-type DKE48_018150 IPR011008 Dimeric alpha-beta barrel DKE48_018150 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE48_018150 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DKE48_018150 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_018150 IPR000485 AsnC-type HTH domain DKE48_018150 IPR036390 Winged helix DNA-binding domain superfamily DKE48_018150 IPR011991 ArsR-like helix-turn-helix domain DKE48_018175 IPR006145 Pseudouridine synthase, RsuA/RluA DKE48_018175 IPR006225 Pseudouridine synthase, RluC/RluD DKE48_018175 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DKE48_018175 IPR020103 Pseudouridine synthase, catalytic domain superfamily DKE48_018195 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DKE48_018195 IPR009057 Homeobox-like domain superfamily DKE48_018195 IPR001647 DNA-binding HTH domain, TetR-type DKE48_018255 IPR000794 Beta-ketoacyl synthase DKE48_018255 IPR014030 Beta-ketoacyl synthase, N-terminal DKE48_018255 IPR014031 Beta-ketoacyl synthase, C-terminal DKE48_018255 IPR018201 Beta-ketoacyl synthase, active site DKE48_018255 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DKE48_018255 IPR016039 Thiolase-like DKE48_018295 IPR024176 Citrate synthase, bacterial-type DKE48_018295 IPR036969 Citrate synthase superfamily DKE48_018295 IPR019810 Citrate synthase active site DKE48_018295 IPR002020 Citrate synthase DKE48_018295 IPR016143 Citrate synthase-like, small alpha subdomain DKE48_018295 IPR016142 Citrate synthase-like, large alpha subdomain DKE48_018295 IPR011278 2-methylcitrate synthase/citrate synthase type I DKE48_018305 IPR000524 Transcription regulator HTH, GntR DKE48_018305 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_018305 IPR036390 Winged helix DNA-binding domain superfamily DKE48_018305 IPR011711 GntR, C-terminal DKE48_018305 IPR008920 Transcription regulator FadR/GntR, C-terminal DKE48_018305 IPR000485 AsnC-type HTH domain DKE48_018315 IPR000796 Aspartate/other aminotransferase DKE48_018315 IPR004839 Aminotransferase, class I/classII DKE48_018315 IPR015424 Pyridoxal phosphate-dependent transferase DKE48_018315 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DKE48_018315 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE48_018315 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE48_018325 IPR037396 FMN hydroxy acid dehydrogenase domain DKE48_018325 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site DKE48_018325 IPR020920 L-lactate dehydrogenase, bacterial DKE48_018325 IPR013785 Aldolase-type TIM barrel DKE48_018325 IPR000262 FMN-dependent dehydrogenase DKE48_018325 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent DKE48_018330 IPR036390 Winged helix DNA-binding domain superfamily DKE48_018330 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_018330 IPR011711 GntR, C-terminal DKE48_018330 IPR008920 Transcription regulator FadR/GntR, C-terminal DKE48_018330 IPR000524 Transcription regulator HTH, GntR DKE48_018355 IPR005886 UDP-glucose 4-epimerase DKE48_018355 IPR036291 NAD(P)-binding domain superfamily DKE48_018355 IPR016040 NAD(P)-binding domain DKE48_018370 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type DKE48_018370 IPR029044 Nucleotide-diphospho-sugar transferases DKE48_018370 IPR005835 Nucleotidyl transferase domain DKE48_018380 IPR029044 Nucleotide-diphospho-sugar transferases DKE48_018380 IPR001173 Glycosyltransferase 2-like DKE48_018400 IPR001173 Glycosyltransferase 2-like DKE48_018400 IPR002495 Glycosyl transferase, family 8 DKE48_018400 IPR029044 Nucleotide-diphospho-sugar transferases DKE48_018410 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DKE48_018410 IPR036291 NAD(P)-binding domain superfamily DKE48_018410 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DKE48_018410 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DKE48_018410 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase DKE48_018410 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DKE48_018410 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DKE48_018410 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily DKE48_018415 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain DKE48_018415 IPR019554 Soluble ligand binding domain DKE48_018415 IPR003715 Polysaccharide export protein DKE48_018435 IPR008104 Macrophage infectivity potentiator DKE48_018435 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DKE48_018435 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal DKE48_018435 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily DKE48_018455 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DKE48_018455 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily DKE48_018455 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal DKE48_018455 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal DKE48_018455 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD DKE48_018455 IPR004393 Nicotinate-nucleotide pyrophosphorylase DKE48_018455 IPR013785 Aldolase-type TIM barrel DKE48_018470 IPR001247 Exoribonuclease, phosphorolytic domain 1 DKE48_018470 IPR015847 Exoribonuclease, phosphorolytic domain 2 DKE48_018470 IPR002381 Ribonuclease PH, bacterial-type DKE48_018470 IPR027408 PNPase/RNase PH domain superfamily DKE48_018470 IPR020568 Ribosomal protein S5 domain 2-type fold DKE48_018470 IPR018336 Ribonuclease PH, conserved site DKE48_018470 IPR036345 Exoribonuclease, PH domain 2 superfamily DKE48_018485 IPR009057 Homeobox-like domain superfamily DKE48_018485 IPR001647 DNA-binding HTH domain, TetR-type DKE48_018485 IPR023764 Transcriptional repressor HTH, FabR DKE48_018490 IPR013571 Transcription regulator QacR, C-terminal DKE48_018490 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE48_018490 IPR001647 DNA-binding HTH domain, TetR-type DKE48_018490 IPR009057 Homeobox-like domain superfamily DKE48_018490 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DKE48_018495 IPR036249 Thioredoxin-like superfamily DKE48_018495 IPR013766 Thioredoxin domain DKE48_018495 IPR017937 Thioredoxin, conserved site DKE48_018495 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DKE48_018495 IPR001853 DSBA-like thioredoxin domain DKE48_018500 IPR010233 Ubiquinone biosynthesis O-methyltransferase DKE48_018500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE48_018505 IPR023214 HAD superfamily DKE48_018505 IPR036412 HAD-like superfamily DKE48_018505 IPR006439 HAD hydrolase, subfamily IA DKE48_018505 IPR041492 Haloacid dehalogenase-like hydrolase DKE48_018505 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DKE48_018505 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic DKE48_018540 IPR011251 Luciferase-like domain DKE48_018540 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent DKE48_018540 IPR036661 Luciferase-like domain superfamily DKE48_018545 IPR035906 MetI-like superfamily DKE48_018545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE48_018555 IPR009057 Homeobox-like domain superfamily DKE48_018555 IPR013573 Transcription regulator YcdC, C-terminal DKE48_018555 IPR001647 DNA-binding HTH domain, TetR-type DKE48_018555 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE48_018555 IPR019915 Transcription regulator, pyrimidine utilisation, RutR DKE48_018560 IPR000845 Nucleoside phosphorylase domain DKE48_018560 IPR035994 Nucleoside phosphorylase superfamily DKE48_018560 IPR010049 MTA/SAH nucleosidase DKE48_018585 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DKE48_018625 IPR029000 Cyclophilin-like domain superfamily DKE48_018625 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DKE48_018625 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DKE48_018705 IPR004101 Mur ligase, C-terminal DKE48_018705 IPR005757 Murein peptide ligase DKE48_018705 IPR036565 Mur-like, catalytic domain superfamily DKE48_018705 IPR036615 Mur ligase, C-terminal domain superfamily DKE48_018705 IPR013221 Mur ligase, central DKE48_018705 IPR000713 Mur ligase, N-terminal catalytic domain DKE48_018745 IPR005904 Hypoxanthine phosphoribosyl transferase DKE48_018745 IPR000836 Phosphoribosyltransferase domain DKE48_018745 IPR029057 Phosphoribosyltransferase-like DKE48_018755 IPR036249 Thioredoxin-like superfamily DKE48_018755 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal DKE48_018755 IPR033954 Disulphide bond isomerase, DsbC/G DKE48_018755 IPR017937 Thioredoxin, conserved site DKE48_018755 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily DKE48_018755 IPR012336 Thioredoxin-like fold DKE48_018765 IPR003735 Metal-sensitive transcriptional repressor DKE48_018765 IPR038390 Metal-sensitive transcriptional repressor superfamily DKE48_018780 IPR002696 Putative membrane protein insertion efficiency factor DKE48_018785 IPR020539 Ribonuclease P, conserved site DKE48_018785 IPR000100 Ribonuclease P DKE48_018785 IPR020568 Ribosomal protein S5 domain 2-type fold DKE48_018785 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKE48_018790 IPR020939 Ribosomal protein L34, conserved site DKE48_018790 IPR000271 Ribosomal protein L34 DKE48_018830 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily DKE48_018830 IPR006120 Resolvase, HTH domain DKE48_018830 IPR006119 Resolvase, N-terminal catalytic domain DKE48_018830 IPR006118 Recombinase, conserved site DKE48_018830 IPR009057 Homeobox-like domain superfamily DKE48_018835 IPR012337 Ribonuclease H-like superfamily DKE48_018835 IPR036397 Ribonuclease H superfamily DKE48_018835 IPR001584 Integrase, catalytic core DKE48_018835 IPR032874 DDE domain DKE48_018850 IPR005841 Alpha-D-phosphohexomutase superfamily DKE48_018850 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DKE48_018850 IPR005843 Alpha-D-phosphohexomutase, C-terminal DKE48_018850 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DKE48_018850 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DKE48_018850 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DKE48_018850 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DKE48_018850 IPR006352 Phosphoglucosamine mutase, bacterial type DKE48_018900 IPR003812 Fido domain DKE48_018900 IPR036597 Fido-like domain superfamily DKE48_018930 IPR025188 Domain of unknown function DUF4113 DKE48_018930 IPR017961 DNA polymerase, Y-family, little finger domain DKE48_018930 IPR001126 UmuC domain DKE48_018930 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DKE48_018935 IPR039418 LexA-like DKE48_018935 IPR036390 Winged helix DNA-binding domain superfamily DKE48_018935 IPR015927 Peptidase S24/S26A/S26B/S26C DKE48_018935 IPR011991 ArsR-like helix-turn-helix domain DKE48_018935 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_018935 IPR006200 Transcription regulator LexA DKE48_018935 IPR006197 Peptidase S24, LexA-like DKE48_018935 IPR036286 LexA/Signal peptidase-like superfamily DKE48_018935 IPR006199 LexA repressor, DNA-binding domain DKE48_018960 IPR036397 Ribonuclease H superfamily DKE48_018960 IPR012337 Ribonuclease H-like superfamily DKE48_018960 IPR001584 Integrase, catalytic core DKE48_018960 IPR025948 HTH-like domain DKE48_019055 IPR036397 Ribonuclease H superfamily DKE48_019055 IPR012337 Ribonuclease H-like superfamily DKE48_019055 IPR009057 Homeobox-like domain superfamily DKE48_019055 IPR001584 Integrase, catalytic core DKE48_019100 IPR001584 Integrase, catalytic core DKE48_019100 IPR009057 Homeobox-like domain superfamily DKE48_019100 IPR012337 Ribonuclease H-like superfamily DKE48_019100 IPR036397 Ribonuclease H superfamily DKE48_019110 IPR011009 Protein kinase-like domain superfamily DKE48_019110 IPR002575 Aminoglycoside phosphotransferase DKE48_019135 IPR014057 Uncharacterized protein HI1420 DKE48_019135 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DKE48_019135 IPR001387 Cro/C1-type helix-turn-helix domain DKE48_019215 IPR012337 Ribonuclease H-like superfamily DKE48_019215 IPR001584 Integrase, catalytic core DKE48_019215 IPR032874 DDE domain DKE48_019215 IPR036397 Ribonuclease H superfamily DKE48_019230 IPR036397 Ribonuclease H superfamily DKE48_019230 IPR032874 DDE domain DKE48_019230 IPR012337 Ribonuclease H-like superfamily DKE48_019230 IPR001584 Integrase, catalytic core DKE48_019310 IPR001584 Integrase, catalytic core DKE48_019310 IPR032874 DDE domain DKE48_019310 IPR012337 Ribonuclease H-like superfamily DKE48_019310 IPR036397 Ribonuclease H superfamily DKE48_019320 IPR003679 Aminoglycoside N(3)-acetyltransferase DKE48_019320 IPR028345 Aminoglycoside 3-N-acetyltransferase-like DKE48_019325 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE48_019420 IPR009241 Toxin HigB-like DKE48_019450 IPR042104 Polyketide synthase, dehydratase domain superfamily DKE48_019450 IPR020843 Polyketide synthase, enoylreductase domain DKE48_019450 IPR013968 Polyketide synthase, ketoreductase domain DKE48_019450 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DKE48_019450 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DKE48_019450 IPR036291 NAD(P)-binding domain superfamily DKE48_019450 IPR006162 Phosphopantetheine attachment site DKE48_019450 IPR016039 Thiolase-like DKE48_019450 IPR036299 Polyketide synthase, docking domain superfmaily DKE48_019450 IPR009081 Phosphopantetheine binding ACP domain DKE48_019450 IPR014043 Acyl transferase DKE48_019450 IPR032821 Ketoacyl-synthetase, C-terminal extension DKE48_019450 IPR014030 Beta-ketoacyl synthase, N-terminal DKE48_019450 IPR014031 Beta-ketoacyl synthase, C-terminal DKE48_019450 IPR018201 Beta-ketoacyl synthase, active site DKE48_019450 IPR011032 GroES-like superfamily DKE48_019450 IPR013154 Alcohol dehydrogenase, N-terminal DKE48_019450 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DKE48_019450 IPR036736 ACP-like superfamily DKE48_019450 IPR001227 Acyl transferase domain superfamily DKE48_019450 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DKE48_019450 IPR020807 Polyketide synthase, dehydratase domain DKE48_019470 IPR000587 Creatinase, N-terminal DKE48_019470 IPR036005 Creatinase/aminopeptidase-like DKE48_019470 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DKE48_019470 IPR000994 Peptidase M24 DKE48_019470 IPR039394 Creatinase, C-terminal DKE48_019485 IPR003735 Metal-sensitive transcriptional repressor DKE48_019485 IPR038390 Metal-sensitive transcriptional repressor superfamily DKE48_019525 IPR013785 Aldolase-type TIM barrel DKE48_019525 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DKE48_019545 IPR011032 GroES-like superfamily DKE48_019545 IPR036291 NAD(P)-binding domain superfamily DKE48_019545 IPR013149 Alcohol dehydrogenase, C-terminal DKE48_019545 IPR020843 Polyketide synthase, enoylreductase domain DKE48_019545 IPR041694 Oxidoreductase, N-terminal domain DKE48_019625 IPR009003 Peptidase S1, PA clan DKE48_019625 IPR036034 PDZ superfamily DKE48_019625 IPR001478 PDZ domain DKE48_019625 IPR001940 Peptidase S1C DKE48_019630 IPR001915 Peptidase M48 DKE48_019630 IPR022919 Peptidase M48, protease HtpX, putative DKE48_019675 IPR005746 Thioredoxin DKE48_019675 IPR036249 Thioredoxin-like superfamily DKE48_019675 IPR017937 Thioredoxin, conserved site DKE48_019675 IPR013766 Thioredoxin domain DKE48_019710 IPR041657 Helix-turn-helix domain, group 17 DKE48_019710 IPR009061 Putative DNA-binding domain superfamily DKE48_019710 IPR010093 SinI-like, DNA-binding domain DKE48_019820 IPR036390 Winged helix DNA-binding domain superfamily DKE48_019820 IPR036388 Winged helix-like DNA-binding domain superfamily DKE48_019820 IPR000525 Initiator Rep protein