locus-tag class description DKE48_000030 PF09335 SNARE associated Golgi protein DKE48_000055 PF01521 Iron-sulphur cluster biosynthesis DKE48_000060 PF00561 alpha/beta hydrolase fold DKE48_000110 PF00209 Sodium:neurotransmitter symporter family DKE48_000120 PF01029 NusB family DKE48_000120 PF01189 16S rRNA methyltransferase RsmB/F DKE48_000130 PF00920 Dehydratase family DKE48_000160 PF00440 Bacterial regulatory proteins, tetR family DKE48_000160 PF08361 MAATS-type transcriptional repressor, C-terminal region DKE48_000180 PF01556 DnaJ C terminal domain DKE48_000180 PF00226 DnaJ domain DKE48_000180 PF00684 DnaJ central domain DKE48_000205 PF00248 Aldo/keto reductase family DKE48_000270 PF03692 Putative zinc- or iron-chelating domain DKE48_000280 PF12002 MgsA AAA+ ATPase C terminal DKE48_000280 PF16193 AAA C-terminal domain DKE48_000280 PF00004 ATPase family associated with various cellular activities (AAA) DKE48_000310 PF00857 Isochorismatase family DKE48_000330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE48_000345 PF14497 Glutathione S-transferase, C-terminal domain DKE48_000345 PF02798 Glutathione S-transferase, N-terminal domain DKE48_000355 PF00324 Amino acid permease DKE48_000375 PF07702 UTRA domain DKE48_000375 PF00392 Bacterial regulatory proteins, gntR family DKE48_000380 PF05962 HutD DKE48_000395 PF00324 Amino acid permease DKE48_000400 PF01979 Amidohydrolase family DKE48_000405 PF00491 Arginase family DKE48_000425 PF01810 LysE type translocator DKE48_000480 PF13401 AAA domain DKE48_000480 PF11426 Tn7 transposition regulator TnsC DKE48_000500 PF00132 Bacterial transferase hexapeptide (six repeats) DKE48_000500 PF14602 Hexapeptide repeat of succinyl-transferase DKE48_000500 PF12804 MobA-like NTP transferase domain DKE48_000505 PF04608 Phosphatidylglycerophosphatase A DKE48_000510 PF00586 AIR synthase related protein, N-terminal domain DKE48_000510 PF02769 AIR synthase related protein, C-terminal domain DKE48_000515 PF01029 NusB family DKE48_000555 PF02580 D-Tyr-tRNA(Tyr) deacylase DKE48_000565 PF00581 Rhodanese-like domain DKE48_000590 PF00072 Response regulator receiver domain DKE48_000590 PF00486 Transcriptional regulatory protein, C terminal DKE48_000600 PF00106 short chain dehydrogenase DKE48_000610 PF00155 Aminotransferase class I and II DKE48_000615 PF04286 Protein of unknown function (DUF445) DKE48_000675 PF01751 Toprim domain DKE48_000675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE48_000675 PF00986 DNA gyrase B subunit, carboxyl terminus DKE48_000675 PF00204 DNA gyrase B DKE48_000685 PF03561 Allantoicase repeat DKE48_000690 PF01494 FAD binding domain DKE48_000715 PF00576 HIUase/Transthyretin family DKE48_000770 PF03960 ArsC family DKE48_000775 PF03372 Endonuclease/Exonuclease/phosphatase family DKE48_000815 PF01820 D-ala D-ala ligase N-terminus DKE48_000815 PF07478 D-ala D-ala ligase C-terminus DKE48_000820 PF08478 POTRA domain, FtsQ-type DKE48_000820 PF03799 Cell division protein FtsQ DKE48_000835 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DKE48_000865 PF01169 Uncharacterized protein family UPF0016 DKE48_000870 PF01613 Flavin reductase like domain DKE48_000870 PF00258 Flavodoxin DKE48_000875 PF03692 Putative zinc- or iron-chelating domain DKE48_000885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKE48_000885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKE48_000885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKE48_000885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKE48_000920 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DKE48_000925 PF04452 RNA methyltransferase DKE48_000930 PF05552 Conserved TM helix DKE48_000930 PF00924 Mechanosensitive ion channel DKE48_000950 PF00857 Isochorismatase family DKE48_000955 PF01037 Lrp/AsnC ligand binding domain DKE48_000985 PF00474 Sodium:solute symporter family DKE48_000990 PF04341 Protein of unknown function, DUF485 DKE48_001030 PF00440 Bacterial regulatory proteins, tetR family DKE48_001030 PF16925 Tetracyclin repressor-like, C-terminal domain DKE48_001035 PF08659 KR domain DKE48_001035 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE48_001035 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE48_001035 PF00107 Zinc-binding dehydrogenase DKE48_001035 PF14765 Polyketide synthase dehydratase DKE48_001035 PF16197 Ketoacyl-synthetase C-terminal extension DKE48_001035 PF00698 Acyl transferase domain DKE48_001035 PF00550 Phosphopantetheine attachment site DKE48_001035 PF08240 Alcohol dehydrogenase GroES-like domain DKE48_001050 PF08543 Phosphomethylpyrimidine kinase DKE48_001050 PF03070 TENA/THI-4/PQQC family DKE48_001050 PF02581 Thiamine monophosphate synthase DKE48_001060 PF07690 Major Facilitator Superfamily DKE48_001065 PF00436 Single-strand binding protein family DKE48_001075 PF03591 AzlC protein DKE48_001090 PF00155 Aminotransferase class I and II DKE48_001090 PF00392 Bacterial regulatory proteins, gntR family DKE48_001105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_001115 PF05726 Pirin C-terminal cupin domain DKE48_001115 PF02678 Pirin DKE48_001165 PF00248 Aldo/keto reductase family DKE48_001200 PF01638 HxlR-like helix-turn-helix DKE48_001350 PF18273 Type III R-M EcoP15I C-terminal domain DKE48_001350 PF01555 DNA methylase DKE48_001415 PF00230 Major intrinsic protein DKE48_001430 PF00977 Histidine biosynthesis protein DKE48_001460 PF00977 Histidine biosynthesis protein DKE48_001475 PF00117 Glutamine amidotransferase class-I DKE48_001480 PF00475 Imidazoleglycerol-phosphate dehydratase DKE48_001505 PF00583 Acetyltransferase (GNAT) family DKE48_001520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE48_001520 PF00512 His Kinase A (phospho-acceptor) domain DKE48_001520 PF00672 HAMP domain DKE48_001525 PF00486 Transcriptional regulatory protein, C terminal DKE48_001525 PF00072 Response regulator receiver domain DKE48_001540 PF00106 short chain dehydrogenase DKE48_001675 PF02875 Mur ligase family, glutamate ligase domain DKE48_001675 PF01225 Mur ligase family, catalytic domain DKE48_001675 PF08245 Mur ligase middle domain DKE48_001690 PF13847 Methyltransferase domain DKE48_001745 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE48_001745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DKE48_001755 PF04011 LemA family DKE48_001770 PF00114 Pilin (bacterial filament) DKE48_001770 PF07963 Prokaryotic N-terminal methylation motif DKE48_001780 PF11846 Virulence factor membrane-bound polymerase, C-terminal DKE48_001780 PF04932 O-Antigen ligase DKE48_001780 PF15864 Protein glycosylation ligase DKE48_001795 PF00210 Ferritin-like domain DKE48_001800 PF04324 BFD-like [2Fe-2S] binding domain DKE48_001805 PF01042 Endoribonuclease L-PSP DKE48_001820 PF01192 RNA polymerase Rpb6 DKE48_001830 PF02401 LytB protein DKE48_001870 PF07963 Prokaryotic N-terminal methylation motif DKE48_001870 PF00114 Pilin (bacterial filament) DKE48_001875 PF00886 Ribosomal protein S16 DKE48_001880 PF05239 PRC-barrel domain DKE48_001880 PF01782 RimM N-terminal domain DKE48_001890 PF01245 Ribosomal protein L19 DKE48_001900 PF03280 Proteobacterial lipase chaperone protein DKE48_001935 PF01565 FAD binding domain DKE48_001935 PF02913 FAD linked oxidases, C-terminal domain DKE48_001950 PF03992 Antibiotic biosynthesis monooxygenase DKE48_001955 PF02525 Flavodoxin-like fold DKE48_001970 PF12805 FUSC-like inner membrane protein yccS DKE48_002035 PF00202 Aminotransferase class-III DKE48_002055 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DKE48_002085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_002085 PF03466 LysR substrate binding domain DKE48_002105 PF02091 Glycyl-tRNA synthetase alpha subunit DKE48_002135 PF04024 PspC domain DKE48_002155 PF08501 Shikimate dehydrogenase substrate binding domain DKE48_002155 PF01488 Shikimate / quinate 5-dehydrogenase DKE48_002155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DKE48_002170 PF02780 Transketolase, C-terminal domain DKE48_002170 PF02779 Transketolase, pyrimidine binding domain DKE48_002170 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DKE48_002175 PF00459 Inositol monophosphatase family DKE48_002185 PF00005 ABC transporter DKE48_002190 PF02405 Permease MlaE DKE48_002215 PF03641 Possible lysine decarboxylase DKE48_002220 PF00293 NUDIX domain DKE48_002225 PF00156 Phosphoribosyl transferase domain DKE48_002245 PF01553 Acyltransferase DKE48_002270 PF02082 Transcriptional regulator DKE48_002275 PF00175 Oxidoreductase NAD-binding domain DKE48_002275 PF00970 Oxidoreductase FAD-binding domain DKE48_002275 PF00042 Globin DKE48_002295 PF00338 Ribosomal protein S10p/S20e DKE48_002305 PF00573 Ribosomal protein L4/L1 family DKE48_002310 PF00276 Ribosomal protein L23 DKE48_002315 PF03947 Ribosomal Proteins L2, C-terminal domain DKE48_002315 PF00181 Ribosomal Proteins L2, RNA binding domain DKE48_002320 PF00203 Ribosomal protein S19 DKE48_002325 PF00237 Ribosomal protein L22p/L17e DKE48_002335 PF00252 Ribosomal protein L16p/L10e DKE48_002340 PF00831 Ribosomal L29 protein DKE48_002345 PF00366 Ribosomal protein S17 DKE48_002355 PF00467 KOW motif DKE48_002355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DKE48_002365 PF00253 Ribosomal protein S14p/S29e DKE48_002370 PF00410 Ribosomal protein S8 DKE48_002375 PF00347 Ribosomal protein L6 DKE48_002380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DKE48_002390 PF00327 Ribosomal protein L30p/L7e DKE48_002395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DKE48_002400 PF00344 SecY translocase DKE48_002405 PF00444 Ribosomal protein L36 DKE48_002410 PF00416 Ribosomal protein S13/S18 DKE48_002445 PF03937 Flavinator of succinate dehydrogenase DKE48_002480 PF09526 Probable metal-binding protein (DUF2387) DKE48_002535 PF01557 Fumarylacetoacetate (FAA) hydrolase family DKE48_002555 PF03358 NADPH-dependent FMN reductase DKE48_002595 PF01551 Peptidase family M23 DKE48_002595 PF10145 Phage-related minor tail protein DKE48_002595 PF01464 Transglycosylase SLT domain DKE48_002605 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DKE48_002605 PF00056 lactate/malate dehydrogenase, NAD binding domain DKE48_002635 PF01066 CDP-alcohol phosphatidyltransferase DKE48_002760 PF04386 Stringent starvation protein B DKE48_002765 PF00043 Glutathione S-transferase, C-terminal domain DKE48_002765 PF13417 Glutathione S-transferase, N-terminal domain DKE48_002770 PF00380 Ribosomal protein S9/S16 DKE48_002785 PF00398 Ribosomal RNA adenine dimethylase DKE48_002830 PF01389 OmpA-like transmembrane domain DKE48_002830 PF00691 OmpA family DKE48_002840 PF13689 YfiR/HmsC-like DKE48_002880 PF00753 Metallo-beta-lactamase superfamily DKE48_002880 PF04273 Putative phosphatase (DUF442) DKE48_002890 PF00085 Thioredoxin DKE48_002895 PF03061 Thioesterase superfamily DKE48_002920 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DKE48_002920 PF01266 FAD dependent oxidoreductase DKE48_002930 PF03795 YCII-related domain DKE48_002935 PF04279 Intracellular septation protein A DKE48_002950 PF04002 RadC-like JAB domain DKE48_002960 PF02355 Protein export membrane protein DKE48_002960 PF07549 SecD/SecF GG Motif DKE48_002970 PF02699 Preprotein translocase subunit DKE48_003015 PF01063 Amino-transferase class IV DKE48_003025 PF00884 Sulfatase DKE48_003045 PF00534 Glycosyl transferases group 1 DKE48_003045 PF13439 Glycosyltransferase Family 4 DKE48_003120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE48_003120 PF12806 Acetyl-CoA dehydrogenase C-terminal like DKE48_003120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE48_003120 PF02770 Acyl-CoA dehydrogenase, middle domain DKE48_003140 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DKE48_003170 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DKE48_003175 PF00291 Pyridoxal-phosphate dependent enzyme DKE48_003210 PF02875 Mur ligase family, glutamate ligase domain DKE48_003210 PF08245 Mur ligase middle domain DKE48_003225 PF00753 Metallo-beta-lactamase superfamily DKE48_003245 PF00083 Sugar (and other) transporter DKE48_003245 PF07690 Major Facilitator Superfamily DKE48_003285 PF02311 AraC-like ligand binding domain DKE48_003285 PF12833 Helix-turn-helix domain DKE48_003290 PF02515 CoA-transferase family III DKE48_003315 PF00893 Small Multidrug Resistance protein DKE48_003325 PF00108 Thiolase, N-terminal domain DKE48_003325 PF02803 Thiolase, C-terminal domain DKE48_003340 PF01139 tRNA-splicing ligase RtcB DKE48_003345 PF00324 Amino acid permease DKE48_003350 PF08468 Methyltransferase small domain N-terminal DKE48_003350 PF05175 Methyltransferase small domain DKE48_003365 PF01741 Large-conductance mechanosensitive channel, MscL DKE48_003420 PF01571 Aminomethyltransferase folate-binding domain DKE48_003435 PF08274 PhnA Zinc-Ribbon DKE48_003435 PF03831 PhnA domain DKE48_003470 PF00072 Response regulator receiver domain DKE48_003480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE48_003480 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DKE48_003510 PF04304 Protein of unknown function (DUF454) DKE48_003515 PF03734 L,D-transpeptidase catalytic domain DKE48_003515 PF17969 L,D-transpeptidase C-terminal domain DKE48_003575 PF00881 Nitroreductase family DKE48_003645 PF02686 Glu-tRNAGln amidotransferase C subunit DKE48_003655 PF04085 rod shape-determining protein MreC DKE48_003665 PF02545 Maf-like protein DKE48_003680 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DKE48_003680 PF06974 Protein of unknown function (DUF1298) DKE48_003700 PF02525 Flavodoxin-like fold DKE48_003720 PF02673 Bacitracin resistance protein BacA DKE48_003760 PF09297 NADH pyrophosphatase zinc ribbon domain DKE48_003760 PF00293 NUDIX domain DKE48_003770 PF04303 PrpF protein DKE48_003775 PF00348 Polyprenyl synthetase DKE48_003780 PF04237 YjbR DKE48_003785 PF01145 SPFH domain / Band 7 family DKE48_003795 PF01734 Patatin-like phospholipase DKE48_003825 PF00072 Response regulator receiver domain DKE48_003825 PF00486 Transcriptional regulatory protein, C terminal DKE48_003895 PF01906 Putative heavy-metal-binding DKE48_003900 PF01906 Putative heavy-metal-binding DKE48_003910 PF00873 AcrB/AcrD/AcrF family DKE48_003915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE48_003915 PF00529 HlyD membrane-fusion protein of T1SS DKE48_003940 PF00829 Ribosomal prokaryotic L21 protein DKE48_003970 PF00588 SpoU rRNA Methylase family DKE48_003980 PF03358 NADPH-dependent FMN reductase DKE48_004005 PF04359 Protein of unknown function (DUF493) DKE48_004035 PF00285 Citrate synthase, C-terminal domain DKE48_004045 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKE48_004050 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKE48_004055 PF00890 FAD binding domain DKE48_004055 PF02910 Fumarate reductase flavoprotein C-term DKE48_004095 PF00549 CoA-ligase DKE48_004095 PF02629 CoA binding domain DKE48_004100 PF00579 tRNA synthetases class I (W and Y) DKE48_004105 PF05661 Protein of unknown function (DUF808) DKE48_004110 PF04228 Putative neutral zinc metallopeptidase DKE48_004185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE48_004195 PF00582 Universal stress protein family DKE48_004205 PF01042 Endoribonuclease L-PSP DKE48_004245 PF01728 FtsJ-like methyltransferase DKE48_004295 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DKE48_004295 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DKE48_004375 PF01435 Peptidase family M48 DKE48_004400 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE48_004400 PF01464 Transglycosylase SLT domain DKE48_004470 PF00440 Bacterial regulatory proteins, tetR family DKE48_004500 PF00529 HlyD membrane-fusion protein of T1SS DKE48_004500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE48_004510 PF00881 Nitroreductase family DKE48_004535 PF02634 FdhD/NarQ family DKE48_004550 PF00152 tRNA synthetases class II (D, K and N) DKE48_004560 PF18073 Rubredoxin metal binding domain DKE48_004570 PF00324 Amino acid permease DKE48_004585 PF01678 Diaminopimelate epimerase DKE48_004595 PF01810 LysE type translocator DKE48_004610 PF01012 Electron transfer flavoprotein domain DKE48_004610 PF00766 Electron transfer flavoprotein FAD-binding domain DKE48_004695 PF00005 ABC transporter DKE48_004720 PF00551 Formyl transferase DKE48_004725 PF02769 AIR synthase related protein, C-terminal domain DKE48_004725 PF00586 AIR synthase related protein, N-terminal domain DKE48_004730 PF01594 AI-2E family transporter DKE48_004735 PF11638 DnaA N-terminal domain DKE48_004735 PF08299 Bacterial dnaA protein helix-turn-helix DKE48_004735 PF00308 Bacterial dnaA protein DKE48_004780 PF00691 OmpA family DKE48_004795 PF02472 Biopolymer transport protein ExbD/TolR DKE48_004805 PF03061 Thioesterase superfamily DKE48_004815 PF05491 RuvB C-terminal winged helix domain DKE48_004815 PF05496 Holliday junction DNA helicase RuvB P-loop domain DKE48_004815 PF17864 RuvB AAA lid domain DKE48_004840 PF07690 Major Facilitator Superfamily DKE48_004860 PF01784 NIF3 (NGG1p interacting factor 3) DKE48_004865 PF00378 Enoyl-CoA hydratase/isomerase DKE48_004905 PF04055 Radical SAM superfamily DKE48_004920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_004920 PF03466 LysR substrate binding domain DKE48_004925 PF00005 ABC transporter DKE48_004925 PF12857 TOBE-like domain DKE48_004930 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_004935 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_004960 PF02223 Thymidylate kinase DKE48_005005 PF00035 Double-stranded RNA binding motif DKE48_005005 PF14622 Ribonuclease-III-like DKE48_005010 PF01926 50S ribosome-binding GTPase DKE48_005010 PF07650 KH domain DKE48_005025 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DKE48_005080 PF17757 UvrB interaction domain DKE48_005080 PF00271 Helicase conserved C-terminal domain DKE48_005080 PF04851 Type III restriction enzyme, res subunit DKE48_005080 PF12344 Ultra-violet resistance protein B DKE48_005080 PF02151 UvrB/uvrC motif DKE48_005095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKE48_005095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKE48_005115 PF01472 PUA domain DKE48_005115 PF00696 Amino acid kinase family DKE48_005185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE48_005190 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE48_005195 PF00768 D-alanyl-D-alanine carboxypeptidase DKE48_005195 PF07943 Penicillin-binding protein 5, C-terminal domain DKE48_005210 PF00849 RNA pseudouridylate synthase DKE48_005245 PF02567 Phenazine biosynthesis-like protein DKE48_005285 PF02581 Thiamine monophosphate synthase DKE48_005300 PF00849 RNA pseudouridylate synthase DKE48_005415 PF00206 Lyase DKE48_005415 PF08328 Adenylosuccinate lyase C-terminal DKE48_005430 PF00293 NUDIX domain DKE48_005435 PF00132 Bacterial transferase hexapeptide (six repeats) DKE48_005440 PF07943 Penicillin-binding protein 5, C-terminal domain DKE48_005440 PF00768 D-alanyl-D-alanine carboxypeptidase DKE48_005475 PF01551 Peptidase family M23 DKE48_005475 PF01476 LysM domain DKE48_005480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_005480 PF03466 LysR substrate binding domain DKE48_005495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE48_005505 PF01197 Ribosomal protein L31 DKE48_005535 PF04328 Selenoprotein, putative DKE48_005605 PF02678 Pirin DKE48_005605 PF17954 Quercetinase C-terminal cupin domain DKE48_005670 PF01713 Smr domain DKE48_005675 PF00218 Indole-3-glycerol phosphate synthase DKE48_005695 PF01433 Peptidase family M1 domain DKE48_005695 PF11838 ERAP1-like C-terminal domain DKE48_005700 PF00117 Glutamine amidotransferase class-I DKE48_005760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DKE48_005760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DKE48_005765 PF01784 NIF3 (NGG1p interacting factor 3) DKE48_005795 PF04452 RNA methyltransferase DKE48_005800 PF02219 Methylenetetrahydrofolate reductase DKE48_005845 PF07690 Major Facilitator Superfamily DKE48_005895 PF03330 Lytic transglycolase DKE48_005895 PF05036 Sporulation related domain DKE48_005915 PF14489 QueF-like protein DKE48_005915 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DKE48_005925 PF00005 ABC transporter DKE48_006265 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE48_006275 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_006285 PF00893 Small Multidrug Resistance protein DKE48_006290 PF12838 4Fe-4S dicluster domain DKE48_006315 PF01980 tRNA-methyltransferase O DKE48_006315 PF18389 TrmO C-terminal domain DKE48_006330 PF04076 Bacterial OB fold (BOF) protein DKE48_006365 PF01513 ATP-NAD kinase DKE48_006370 PF07023 Protein of unknown function (DUF1315) DKE48_006375 PF00591 Glycosyl transferase family, a/b domain DKE48_006375 PF02885 Glycosyl transferase family, helical bundle domain DKE48_006390 PF02770 Acyl-CoA dehydrogenase, middle domain DKE48_006390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE48_006390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE48_006405 PF01842 ACT domain DKE48_006405 PF00800 Prephenate dehydratase DKE48_006405 PF01817 Chorismate mutase type II DKE48_006420 PF03781 Sulfatase-modifying factor enzyme 1 DKE48_006445 PF05690 Thiazole biosynthesis protein ThiG DKE48_006470 PF00313 'Cold-shock' DNA-binding domain DKE48_006475 PF00270 DEAD/DEAH box helicase DKE48_006475 PF00271 Helicase conserved C-terminal domain DKE48_006485 PF00881 Nitroreductase family DKE48_006490 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DKE48_006490 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DKE48_006545 PF09424 Yqey-like protein DKE48_006550 PF01165 Ribosomal protein S21 DKE48_006610 PF07262 CDI immunity protein DKE48_006615 PF07262 CDI immunity protein DKE48_006645 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family DKE48_006695 PF03466 LysR substrate binding domain DKE48_006695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_006705 PF00171 Aldehyde dehydrogenase family DKE48_006755 PF00561 alpha/beta hydrolase fold DKE48_006830 PF12146 Serine aminopeptidase, S33 DKE48_006850 PF06719 AraC-type transcriptional regulator N-terminus DKE48_006850 PF12833 Helix-turn-helix domain DKE48_006870 PF04403 Paraquat-inducible protein A DKE48_006890 PF00576 HIUase/Transthyretin family DKE48_006900 PF00486 Transcriptional regulatory protein, C terminal DKE48_006900 PF00072 Response regulator receiver domain DKE48_006950 PF00072 Response regulator receiver domain DKE48_006950 PF00486 Transcriptional regulatory protein, C terminal DKE48_006965 PF00892 EamA-like transporter family DKE48_006970 PF07995 Glucose / Sorbosone dehydrogenase DKE48_007020 PF02844 Phosphoribosylglycinamide synthetase, N domain DKE48_007020 PF02843 Phosphoribosylglycinamide synthetase, C domain DKE48_007020 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DKE48_007030 PF02954 Bacterial regulatory protein, Fis family DKE48_007070 PF08379 Bacterial transglutaminase-like N-terminal region DKE48_007070 PF01841 Transglutaminase-like superfamily DKE48_007085 PF03796 DnaB-like helicase C terminal domain DKE48_007085 PF00772 DnaB-like helicase N terminal domain DKE48_007095 PF01084 Ribosomal protein S18 DKE48_007100 PF01250 Ribosomal protein S6 DKE48_007110 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DKE48_007205 PF03462 PCRF domain DKE48_007205 PF00472 RF-1 domain DKE48_007230 PF00106 short chain dehydrogenase DKE48_007255 PF03109 ABC1 family DKE48_007280 PF02669 K+-transporting ATPase, c chain DKE48_007290 PF00072 Response regulator receiver domain DKE48_007290 PF00486 Transcriptional regulatory protein, C terminal DKE48_007305 PF03232 Ubiquinone biosynthesis protein COQ7 DKE48_007310 PF07690 Major Facilitator Superfamily DKE48_007335 PF06434 Aconitate hydratase 2 N-terminus DKE48_007335 PF11791 Aconitate B N-terminal domain DKE48_007335 PF00330 Aconitase family (aconitate hydratase) DKE48_007365 PF04284 Protein of unknown function (DUF441) DKE48_007395 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DKE48_007410 PF17209 Hfq protein DKE48_007445 PF00958 GMP synthase C terminal domain DKE48_007445 PF00117 Glutamine amidotransferase class-I DKE48_007445 PF02540 NAD synthase DKE48_007455 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DKE48_007460 PF13520 Amino acid permease DKE48_007465 PF00171 Aldehyde dehydrogenase family DKE48_007480 PF00465 Iron-containing alcohol dehydrogenase DKE48_007495 PF06445 GyrI-like small molecule binding domain DKE48_007500 PF02110 Hydroxyethylthiazole kinase family DKE48_007530 PF13954 PapC N-terminal domain DKE48_007530 PF13953 PapC C-terminal domain DKE48_007530 PF00577 Outer membrane usher protein DKE48_007560 PF01817 Chorismate mutase type II DKE48_007600 PF03328 HpcH/HpaI aldolase/citrate lyase family DKE48_007630 PF00924 Mechanosensitive ion channel DKE48_007710 PF03594 Benzoate membrane transport protein DKE48_007715 PF01037 Lrp/AsnC ligand binding domain DKE48_007720 PF01810 LysE type translocator DKE48_007730 PF03466 LysR substrate binding domain DKE48_007730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_007820 PF01451 Low molecular weight phosphotyrosine protein phosphatase DKE48_007825 PF01565 FAD binding domain DKE48_007825 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DKE48_007900 PF00364 Biotin-requiring enzyme DKE48_007920 PF00486 Transcriptional regulatory protein, C terminal DKE48_007920 PF00072 Response regulator receiver domain DKE48_007965 PF02391 MoaE protein DKE48_008010 PF02635 DsrE/DsrF-like family DKE48_008015 PF16363 GDP-mannose 4,6 dehydratase DKE48_008045 PF01266 FAD dependent oxidoreductase DKE48_008055 PF02542 YgbB family DKE48_008075 PF00158 Sigma-54 interaction domain DKE48_008075 PF00072 Response regulator receiver domain DKE48_008075 PF02954 Bacterial regulatory protein, Fis family DKE48_008095 PF00696 Amino acid kinase family DKE48_008140 PF07977 FabA-like domain DKE48_008160 PF02631 RecX family DKE48_008175 PF13419 Haloacid dehalogenase-like hydrolase DKE48_008205 PF00324 Amino acid permease DKE48_008225 PF01740 STAS domain DKE48_008225 PF00916 Sulfate permease family DKE48_008320 PF00202 Aminotransferase class-III DKE48_008325 PF00571 CBS domain DKE48_008325 PF01380 SIS domain DKE48_008375 PF08173 Membrane bound YbgT-like protein DKE48_008425 PF02386 Cation transport protein DKE48_008465 PF02617 ATP-dependent Clp protease adaptor protein ClpS DKE48_008470 PF07724 AAA domain (Cdc48 subfamily) DKE48_008470 PF17871 AAA lid domain DKE48_008470 PF02861 Clp amino terminal domain, pathogenicity island component DKE48_008470 PF10431 C-terminal, D2-small domain, of ClpB protein DKE48_008470 PF00004 ATPase family associated with various cellular activities (AAA) DKE48_008520 PF06418 CTP synthase N-terminus DKE48_008520 PF00117 Glutamine amidotransferase class-I DKE48_008535 PF04239 Protein of unknown function (DUF421) DKE48_008545 PF04977 Septum formation initiator DKE48_008555 PF01144 Coenzyme A transferase DKE48_008560 PF01144 Coenzyme A transferase DKE48_008585 PF02627 Carboxymuconolactone decarboxylase family DKE48_008595 PF00775 Dioxygenase DKE48_008605 PF05048 Periplasmic copper-binding protein (NosD) DKE48_008675 PF07690 Major Facilitator Superfamily DKE48_008705 PF00355 Rieske [2Fe-2S] domain DKE48_008705 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DKE48_008725 PF01613 Flavin reductase like domain DKE48_008760 PF01144 Coenzyme A transferase DKE48_008770 PF00775 Dioxygenase DKE48_008770 PF04444 Catechol dioxygenase N terminus DKE48_008775 PF02426 Muconolactone delta-isomerase DKE48_008825 PF00561 alpha/beta hydrolase fold DKE48_008840 PF01872 RibD C-terminal domain DKE48_008860 PF12706 Beta-lactamase superfamily domain DKE48_008865 PF08359 YsiA-like protein, C-terminal region DKE48_008865 PF00440 Bacterial regulatory proteins, tetR family DKE48_008925 PF07690 Major Facilitator Superfamily DKE48_008930 PF04909 Amidohydrolase DKE48_009005 PF07690 Major Facilitator Superfamily DKE48_009045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKE48_009045 PF14572 Phosphoribosyl synthetase-associated domain DKE48_009075 PF01425 Amidase DKE48_009085 PF07690 Major Facilitator Superfamily DKE48_009120 PF02824 TGS domain DKE48_009120 PF13291 ACT domain DKE48_009120 PF04607 Region found in RelA / SpoT proteins DKE48_009155 PF00106 short chain dehydrogenase DKE48_009220 PF16970 Type-1 fimbrial protein, A DKE48_009305 PF04055 Radical SAM superfamily DKE48_009305 PF13186 Iron-sulfur cluster-binding domain DKE48_009310 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DKE48_009315 PF03070 TENA/THI-4/PQQC family DKE48_009380 PF03621 MbtH-like protein DKE48_009435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_009435 PF03459 TOBE domain DKE48_009465 PF01613 Flavin reductase like domain DKE48_009480 PF01738 Dienelactone hydrolase family DKE48_009540 PF01144 Coenzyme A transferase DKE48_009560 PF03466 LysR substrate binding domain DKE48_009560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_009670 PF04273 Putative phosphatase (DUF442) DKE48_009670 PF00753 Metallo-beta-lactamase superfamily DKE48_009680 PF01062 Bestrophin, RFP-TM, chloride channel DKE48_009685 PF00107 Zinc-binding dehydrogenase DKE48_009685 PF08240 Alcohol dehydrogenase GroES-like domain DKE48_009710 PF00676 Dehydrogenase E1 component DKE48_009755 PF00004 ATPase family associated with various cellular activities (AAA) DKE48_009755 PF17862 AAA+ lid domain DKE48_009755 PF01434 Peptidase family M41 DKE48_009785 PF01612 3'-5' exonuclease DKE48_009785 PF00570 HRDC domain DKE48_009895 PF02684 Lipid-A-disaccharide synthetase DKE48_009920 PF01925 Sulfite exporter TauE/SafE DKE48_010000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE48_010000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE48_010000 PF02770 Acyl-CoA dehydrogenase, middle domain DKE48_010035 PF02082 Transcriptional regulator DKE48_010050 PF01521 Iron-sulphur cluster biosynthesis DKE48_010065 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE48_010105 PF13460 NAD(P)H-binding DKE48_010145 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_010175 PF07715 TonB-dependent Receptor Plug Domain DKE48_010175 PF00593 TonB dependent receptor DKE48_010185 PF01618 MotA/TolQ/ExbB proton channel family DKE48_010225 PF03956 Lysine exporter LysO DKE48_010240 PF00216 Bacterial DNA-binding protein DKE48_010245 PF00575 S1 RNA binding domain DKE48_010285 PF07963 Prokaryotic N-terminal methylation motif DKE48_010285 PF11612 Type II secretion system (T2SS), protein J DKE48_010320 PF02348 Cytidylyltransferase DKE48_010330 PF00664 ABC transporter transmembrane region DKE48_010330 PF00005 ABC transporter DKE48_010350 PF13614 AAA domain DKE48_010365 PF01636 Phosphotransferase enzyme family DKE48_010380 PF01116 Fructose-bisphosphate aldolase class-II DKE48_010400 PF02545 Maf-like protein DKE48_010405 PF08007 Cupin superfamily protein DKE48_010420 PF00375 Sodium:dicarboxylate symporter family DKE48_010430 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DKE48_010450 PF01597 Glycine cleavage H-protein DKE48_010455 PF02146 Sir2 family DKE48_010465 PF01037 Lrp/AsnC ligand binding domain DKE48_010475 PF04229 GrpB protein DKE48_010490 PF09992 Phosphodiester glycosidase DKE48_010500 PF04264 YceI-like domain DKE48_010515 PF00438 S-adenosylmethionine synthetase, N-terminal domain DKE48_010515 PF02772 S-adenosylmethionine synthetase, central domain DKE48_010515 PF02773 S-adenosylmethionine synthetase, C-terminal domain DKE48_010575 PF16970 Type-1 fimbrial protein, A DKE48_010610 PF00892 EamA-like transporter family DKE48_010660 PF01709 Transcriptional regulator DKE48_010720 PF03180 NLPA lipoprotein DKE48_010725 PF09383 NIL domain DKE48_010725 PF00005 ABC transporter DKE48_010775 PF02222 ATP-grasp domain DKE48_010805 PF01641 SelR domain DKE48_010810 PF00155 Aminotransferase class I and II DKE48_010830 PF00588 SpoU rRNA Methylase family DKE48_010850 PF13192 Thioredoxin domain DKE48_010850 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE48_010875 PF01022 Bacterial regulatory protein, arsR family DKE48_010880 PF03960 ArsC family DKE48_010890 PF01979 Amidohydrolase family DKE48_010890 PF13382 Adenine deaminase C-terminal domain DKE48_010930 PF00005 ABC transporter DKE48_010945 PF00083 Sugar (and other) transporter DKE48_010965 PF01654 Cytochrome bd terminal oxidase subunit I DKE48_010970 PF02322 Cytochrome bd terminal oxidase subunit II DKE48_010980 PF00392 Bacterial regulatory proteins, gntR family DKE48_010980 PF00155 Aminotransferase class I and II DKE48_011000 PF00698 Acyl transferase domain DKE48_011015 PF01039 Carboxyl transferase domain DKE48_011035 PF07690 Major Facilitator Superfamily DKE48_011055 PF04172 LrgB-like family DKE48_011080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_011080 PF03466 LysR substrate binding domain DKE48_011135 PF00005 ABC transporter DKE48_011160 PF00072 Response regulator receiver domain DKE48_011175 PF01037 Lrp/AsnC ligand binding domain DKE48_011175 PF13404 AsnC-type helix-turn-helix domain DKE48_011260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_011260 PF03466 LysR substrate binding domain DKE48_011290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE48_011290 PF02770 Acyl-CoA dehydrogenase, middle domain DKE48_011290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE48_011300 PF00378 Enoyl-CoA hydratase/isomerase DKE48_011305 PF00364 Biotin-requiring enzyme DKE48_011305 PF02785 Biotin carboxylase C-terminal domain DKE48_011305 PF00289 Biotin carboxylase, N-terminal domain DKE48_011305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE48_011360 PF01144 Coenzyme A transferase DKE48_011380 PF00378 Enoyl-CoA hydratase/isomerase DKE48_011400 PF09339 IclR helix-turn-helix domain DKE48_011405 PF07690 Major Facilitator Superfamily DKE48_011420 PF09339 IclR helix-turn-helix domain DKE48_011425 PF02515 CoA-transferase family III DKE48_011445 PF00266 Aminotransferase class-V DKE48_011470 PF00392 Bacterial regulatory proteins, gntR family DKE48_011470 PF07702 UTRA domain DKE48_011485 PF02525 Flavodoxin-like fold DKE48_011490 PF03466 LysR substrate binding domain DKE48_011490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_011495 PF02627 Carboxymuconolactone decarboxylase family DKE48_011510 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DKE48_011520 PF00171 Aldehyde dehydrogenase family DKE48_011555 PF01292 Prokaryotic cytochrome b561 DKE48_011565 PF01638 HxlR-like helix-turn-helix DKE48_011600 PF00132 Bacterial transferase hexapeptide (six repeats) DKE48_011650 PF06243 Phenylacetic acid degradation B DKE48_011655 PF05138 Phenylacetic acid catabolic protein DKE48_011705 PF05544 Proline racemase DKE48_011710 PF00392 Bacterial regulatory proteins, gntR family DKE48_011735 PF00376 MerR family regulatory protein DKE48_011735 PF09278 MerR, DNA binding DKE48_011745 PF02677 Epoxyqueuosine reductase QueH DKE48_011765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DKE48_011770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_011770 PF03466 LysR substrate binding domain DKE48_011860 PF01402 Ribbon-helix-helix protein, copG family DKE48_011860 PF08753 NikR C terminal nickel binding domain DKE48_011870 PF01638 HxlR-like helix-turn-helix DKE48_011895 PF00107 Zinc-binding dehydrogenase DKE48_011895 PF13823 Alcohol dehydrogenase GroES-associated DKE48_011895 PF08240 Alcohol dehydrogenase GroES-like domain DKE48_011960 PF07286 Protein of unknown function (DUF1445) DKE48_011965 PF03746 LamB/YcsF family DKE48_011995 PF05114 Protein of unknown function (DUF692) DKE48_012025 PF00892 EamA-like transporter family DKE48_012040 PF06629 MltA-interacting protein MipA DKE48_012160 PF00313 'Cold-shock' DNA-binding domain DKE48_012165 PF00117 Glutamine amidotransferase class-I DKE48_012180 PF13404 AsnC-type helix-turn-helix domain DKE48_012180 PF01037 Lrp/AsnC ligand binding domain DKE48_012265 PF07517 SecA DEAD-like domain DKE48_012265 PF01043 SecA preprotein cross-linking domain DKE48_012300 PF17803 Bacterial cadherin-like domain DKE48_012375 PF00106 short chain dehydrogenase DKE48_012400 PF00037 4Fe-4S binding domain DKE48_012400 PF11953 Domain of unknown function (DUF3470) DKE48_012425 PF01205 Uncharacterized protein family UPF0029 DKE48_012435 PF00664 ABC transporter transmembrane region DKE48_012435 PF00005 ABC transporter DKE48_012435 PF03412 Peptidase C39 family DKE48_012445 PF00005 ABC transporter DKE48_012445 PF12399 Branched-chain amino acid ATP-binding cassette transporter DKE48_012450 PF03968 OstA-like protein DKE48_012550 PF01810 LysE type translocator DKE48_012580 PF02601 Exonuclease VII, large subunit DKE48_012580 PF13742 OB-fold nucleic acid binding domain DKE48_012635 PF06099 Phenol hydroxylase subunit DKE48_012645 PF02406 MmoB/DmpM family DKE48_012670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_012670 PF03466 LysR substrate binding domain DKE48_012680 PF00866 Ring hydroxylating beta subunit DKE48_012700 PF07690 Major Facilitator Superfamily DKE48_012740 PF13192 Thioredoxin domain DKE48_012740 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE48_012770 PF00872 Transposase, Mutator family DKE48_012835 PF02566 OsmC-like protein DKE48_012840 PF00027 Cyclic nucleotide-binding domain DKE48_012840 PF13545 Crp-like helix-turn-helix domain DKE48_012860 PF00709 Adenylosuccinate synthetase DKE48_012865 PF13393 Histidyl-tRNA synthetase DKE48_012870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKE48_012870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKE48_012885 PF02599 Global regulator protein family DKE48_012905 PF00962 Adenosine/AMP deaminase DKE48_012930 PF02678 Pirin DKE48_012930 PF17954 Quercetinase C-terminal cupin domain DKE48_012945 PF00106 short chain dehydrogenase DKE48_012955 PF04072 Leucine carboxyl methyltransferase DKE48_013005 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE48_013005 PF00175 Oxidoreductase NAD-binding domain DKE48_013020 PF07690 Major Facilitator Superfamily DKE48_013090 PF00324 Amino acid permease DKE48_013095 PF04958 Arginine N-succinyltransferase beta subunit DKE48_013120 PF00392 Bacterial regulatory proteins, gntR family DKE48_013120 PF07729 FCD domain DKE48_013130 PF00324 Amino acid permease DKE48_013150 PF05643 Putative bacterial lipoprotein (DUF799) DKE48_013160 PF03783 Curli production assembly/transport component CsgG DKE48_013230 PF00563 EAL domain DKE48_013230 PF01590 GAF domain DKE48_013230 PF00990 Diguanylate cyclase, GGDEF domain DKE48_013230 PF00360 Phytochrome region DKE48_013265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE48_013265 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE48_013270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE48_013270 PF00005 ABC transporter DKE48_013275 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_013275 PF12911 N-terminal TM domain of oligopeptide transport permease C DKE48_013320 PF02021 Uncharacterised protein family UPF0102 DKE48_013360 PF01494 FAD binding domain DKE48_013405 PF01812 5-formyltetrahydrofolate cyclo-ligase family DKE48_013415 PF13018 Extended Signal Peptide of Type V secretion system DKE48_013415 PF03895 YadA-like membrane anchor domain DKE48_013415 PF05662 Coiled stalk of trimeric autotransporter adhesin DKE48_013415 PF05658 Head domain of trimeric autotransporter adhesin DKE48_013435 PF05658 Head domain of trimeric autotransporter adhesin DKE48_013435 PF03895 YadA-like membrane anchor domain DKE48_013435 PF13018 Extended Signal Peptide of Type V secretion system DKE48_013435 PF05662 Coiled stalk of trimeric autotransporter adhesin DKE48_013450 PF02590 Predicted SPOUT methyltransferase DKE48_013455 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DKE48_013485 PF05191 Adenylate kinase, active site lid DKE48_013520 PF02492 CobW/HypB/UreG, nucleotide-binding domain DKE48_013525 PF01730 UreF DKE48_013530 PF02814 UreE urease accessory protein, N-terminal domain DKE48_013530 PF05194 UreE urease accessory protein, C-terminal domain DKE48_013545 PF00699 Urease beta subunit DKE48_013550 PF00547 Urease, gamma subunit DKE48_013580 PF01595 Cyclin M transmembrane N-terminal domain DKE48_013580 PF03471 Transporter associated domain DKE48_013580 PF00571 CBS domain DKE48_013600 PF00009 Elongation factor Tu GTP binding domain DKE48_013635 PF00301 Rubredoxin DKE48_013645 PF00561 alpha/beta hydrolase fold DKE48_013665 PF00912 Transglycosylase DKE48_013690 PF00484 Carbonic anhydrase DKE48_013705 PF00593 TonB dependent receptor DKE48_013705 PF07715 TonB-dependent Receptor Plug Domain DKE48_013710 PF01521 Iron-sulphur cluster biosynthesis DKE48_013710 PF01106 NifU-like domain DKE48_013725 PF03781 Sulfatase-modifying factor enzyme 1 DKE48_013745 PF01384 Phosphate transporter family DKE48_013785 PF12833 Helix-turn-helix domain DKE48_013785 PF07883 Cupin domain DKE48_013790 PF04960 Glutaminase DKE48_013815 PF00171 Aldehyde dehydrogenase family DKE48_013850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE48_013875 PF01614 Bacterial transcriptional regulator DKE48_013875 PF09339 IclR helix-turn-helix domain DKE48_013900 PF00378 Enoyl-CoA hydratase/isomerase DKE48_013920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE48_013935 PF00375 Sodium:dicarboxylate symporter family DKE48_013950 PF03061 Thioesterase superfamily DKE48_014020 PF00701 Dihydrodipicolinate synthetase family DKE48_014150 PF13533 Biotin-lipoyl like DKE48_014155 PF03061 Thioesterase superfamily DKE48_014160 PF00490 Delta-aminolevulinic acid dehydratase DKE48_014165 PF01266 FAD dependent oxidoreductase DKE48_014205 PF01168 Alanine racemase, N-terminal domain DKE48_014215 PF00437 Type II/IV secretion system protein DKE48_014220 PF01475 Ferric uptake regulator family DKE48_014225 PF04355 SmpA / OmlA family DKE48_014230 PF03658 RnfH family Ubiquitin DKE48_014245 PF01814 Hemerythrin HHE cation binding domain DKE48_014270 PF00692 dUTPase DKE48_014280 PF00691 OmpA family DKE48_014280 PF13488 Glycine zipper DKE48_014335 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DKE48_014340 PF04377 Arginine-tRNA-protein transferase, C terminus DKE48_014340 PF04376 Arginine-tRNA-protein transferase, N terminus DKE48_014345 PF00583 Acetyltransferase (GNAT) family DKE48_014360 PF00009 Elongation factor Tu GTP binding domain DKE48_014360 PF03144 Elongation factor Tu domain 2 DKE48_014360 PF03143 Elongation factor Tu C-terminal domain DKE48_014385 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE48_014385 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE48_014395 PF05726 Pirin C-terminal cupin domain DKE48_014395 PF02678 Pirin DKE48_014405 PF02540 NAD synthase DKE48_014405 PF00795 Carbon-nitrogen hydrolase DKE48_014430 PF00171 Aldehyde dehydrogenase family DKE48_014450 PF00180 Isocitrate/isopropylmalate dehydrogenase DKE48_014475 PF00037 4Fe-4S binding domain DKE48_014480 PF01467 Cytidylyltransferase-like DKE48_014485 PF01668 SmpB protein DKE48_014505 PF13525 Outer membrane lipoprotein DKE48_014525 PF03550 Outer membrane lipoprotein LolB DKE48_014555 PF14572 Phosphoribosyl synthetase-associated domain DKE48_014555 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKE48_014560 PF01386 Ribosomal L25p family DKE48_014585 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DKE48_014595 PF02581 Thiamine monophosphate synthase DKE48_014595 PF03070 TENA/THI-4/PQQC family DKE48_014595 PF08543 Phosphomethylpyrimidine kinase DKE48_014600 PF01476 LysM domain DKE48_014600 PF04972 BON domain DKE48_014605 PF00550 Phosphopantetheine attachment site DKE48_014620 PF01783 Ribosomal L32p protein family DKE48_014625 PF02620 Large ribosomal RNA subunit accumulation protein YceD DKE48_014630 PF04315 Elongation factor P hydroxylase DKE48_014635 PF01300 Telomere recombination DKE48_014650 PF00849 RNA pseudouridylate synthase DKE48_014650 PF01479 S4 domain DKE48_014665 PF00155 Aminotransferase class I and II DKE48_014670 PF06968 Biotin and Thiamin Synthesis associated domain DKE48_014670 PF04055 Radical SAM superfamily DKE48_014670 PF00202 Aminotransferase class-III DKE48_014695 PF00210 Ferritin-like domain DKE48_014720 PF01925 Sulfite exporter TauE/SafE DKE48_014730 PF03309 Type III pantothenate kinase DKE48_014795 PF01048 Phosphorylase superfamily DKE48_014800 PF10609 NUBPL iron-transfer P-loop NTPase DKE48_014885 PF00175 Oxidoreductase NAD-binding domain DKE48_014885 PF00970 Oxidoreductase FAD-binding domain DKE48_014890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_014890 PF03466 LysR substrate binding domain DKE48_014900 PF00313 'Cold-shock' DNA-binding domain DKE48_014910 PF00361 Proton-conducting membrane transporter DKE48_014915 PF00361 Proton-conducting membrane transporter DKE48_014920 PF00361 Proton-conducting membrane transporter DKE48_014920 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DKE48_014925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE48_014930 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DKE48_014990 PF00486 Transcriptional regulatory protein, C terminal DKE48_014990 PF00072 Response regulator receiver domain DKE48_015025 PF17074 Darcynin, domain of unknown function DKE48_015065 PF00440 Bacterial regulatory proteins, tetR family DKE48_015065 PF16295 Tetracyclin repressor-like, C-terminal domain DKE48_015075 PF01613 Flavin reductase like domain DKE48_015095 PF03466 LysR substrate binding domain DKE48_015095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_015115 PF03466 LysR substrate binding domain DKE48_015115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_015125 PF14537 Cytochrome c3 DKE48_015125 PF00890 FAD binding domain DKE48_015140 PF17932 Tetracyclin repressor-like, C-terminal domain DKE48_015140 PF00440 Bacterial regulatory proteins, tetR family DKE48_015145 PF02515 CoA-transferase family III DKE48_015160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_015160 PF03466 LysR substrate binding domain DKE48_015165 PF08240 Alcohol dehydrogenase GroES-like domain DKE48_015165 PF00107 Zinc-binding dehydrogenase DKE48_015195 PF02445 Quinolinate synthetase A protein DKE48_015200 PF01960 ArgJ family DKE48_015205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKE48_015205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE48_015210 PF00893 Small Multidrug Resistance protein DKE48_015240 PF00834 Ribulose-phosphate 3 epimerase family DKE48_015260 PF04445 Putative SAM-dependent methyltransferase DKE48_015265 PF00814 Glycoprotease family DKE48_015270 PF00132 Bacterial transferase hexapeptide (six repeats) DKE48_015275 PF00293 NUDIX domain DKE48_015320 PF04715 Anthranilate synthase component I, N terminal region DKE48_015320 PF00425 chorismate binding enzyme DKE48_015335 PF01634 ATP phosphoribosyltransferase DKE48_015350 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DKE48_015400 PF00795 Carbon-nitrogen hydrolase DKE48_015415 PF02566 OsmC-like protein DKE48_015445 PF02325 YGGT family DKE48_015450 PF03807 NADP oxidoreductase coenzyme F420-dependent DKE48_015450 PF14748 Pyrroline-5-carboxylate reductase dimerisation DKE48_015465 PF02541 Ppx/GppA phosphatase family DKE48_015470 PF00085 Thioredoxin DKE48_015475 PF07497 Rho termination factor, RNA-binding domain DKE48_015475 PF07498 Rho termination factor, N-terminal domain DKE48_015475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE48_015490 PF00216 Bacterial DNA-binding protein DKE48_015500 PF01409 tRNA synthetases class II core domain (F) DKE48_015500 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DKE48_015520 PF00453 Ribosomal protein L20 DKE48_015525 PF01632 Ribosomal protein L35 DKE48_015530 PF07690 Major Facilitator Superfamily DKE48_015545 PF05198 Translation initiation factor IF-3, N-terminal domain DKE48_015545 PF00707 Translation initiation factor IF-3, C-terminal domain DKE48_015560 PF04751 Protein of unknown function (DUF615) DKE48_015565 PF00381 PTS HPr component phosphorylation site DKE48_015580 PF02548 Ketopantoate hydroxymethyltransferase DKE48_015600 PF03819 MazG nucleotide pyrophosphohydrolase domain DKE48_015625 PF00291 Pyridoxal-phosphate dependent enzyme DKE48_015630 PF01627 Hpt domain DKE48_015630 PF00512 His Kinase A (phospho-acceptor) domain DKE48_015630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE48_015630 PF00672 HAMP domain DKE48_015630 PF00072 Response regulator receiver domain DKE48_015630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DKE48_015635 PF00378 Enoyl-CoA hydratase/isomerase DKE48_015640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKE48_015640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKE48_015665 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DKE48_015670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DKE48_015670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DKE48_015685 PF07690 Major Facilitator Superfamily DKE48_015700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_015700 PF03466 LysR substrate binding domain DKE48_015720 PF01026 TatD related DNase DKE48_015770 PF10369 Small subunit of acetolactate synthase DKE48_015790 PF08264 Anticodon-binding domain of tRNA DKE48_015790 PF00133 tRNA synthetases class I (I, L, M and V) DKE48_015790 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE48_015790 PF09334 tRNA synthetases class I (M) DKE48_015795 PF09334 tRNA synthetases class I (M) DKE48_015795 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE48_015795 PF00133 tRNA synthetases class I (I, L, M and V) DKE48_015795 PF08264 Anticodon-binding domain of tRNA DKE48_015800 PF00133 tRNA synthetases class I (I, L, M and V) DKE48_015800 PF08264 Anticodon-binding domain of tRNA DKE48_015800 PF09334 tRNA synthetases class I (M) DKE48_015800 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE48_015805 PF08264 Anticodon-binding domain of tRNA DKE48_015805 PF00133 tRNA synthetases class I (I, L, M and V) DKE48_015805 PF09334 tRNA synthetases class I (M) DKE48_015805 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE48_015810 PF08264 Anticodon-binding domain of tRNA DKE48_015810 PF09334 tRNA synthetases class I (M) DKE48_015810 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE48_015810 PF00133 tRNA synthetases class I (I, L, M and V) DKE48_015835 PF02321 Outer membrane efflux protein DKE48_015850 PF00929 Exonuclease DKE48_015855 PF03193 RsgA GTPase DKE48_015865 PF00462 Glutaredoxin DKE48_015870 PF02556 Preprotein translocase subunit SecB DKE48_015885 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE48_015885 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE48_015940 PF00535 Glycosyl transferase family 2 DKE48_015965 PF13360 PQQ-like domain DKE48_015965 PF01011 PQQ enzyme repeat DKE48_015995 PF04055 Radical SAM superfamily DKE48_016000 PF00334 Nucleoside diphosphate kinase DKE48_016005 PF04384 Iron-sulphur cluster assembly DKE48_016010 PF01569 PAP2 superfamily DKE48_016040 PF00171 Aldehyde dehydrogenase family DKE48_016050 PF01202 Shikimate kinase DKE48_016055 PF02447 GntP family permease DKE48_016060 PF01081 KDPG and KHG aldolase DKE48_016100 PF00574 Clp protease DKE48_016115 PF18331 PKHD-type hydroxylase C-terminal domain DKE48_016115 PF13640 2OG-Fe(II) oxygenase superfamily DKE48_016120 PF08502 LeuA allosteric (dimerisation) domain DKE48_016120 PF00682 HMGL-like DKE48_016130 PF00561 alpha/beta hydrolase fold DKE48_016130 PF07021 Methionine biosynthesis protein MetW DKE48_016140 PF01725 Ham1 family DKE48_016155 PF02416 mttA/Hcf106 family DKE48_016195 PF00303 Thymidylate synthase DKE48_016200 PF00186 Dihydrofolate reductase DKE48_016220 PF02472 Biopolymer transport protein ExbD/TolR DKE48_016225 PF01618 MotA/TolQ/ExbB proton channel family DKE48_016235 PF00551 Formyl transferase DKE48_016235 PF01842 ACT domain DKE48_016250 PF00830 Ribosomal L28 family DKE48_016310 PF01638 HxlR-like helix-turn-helix DKE48_016320 PF04102 SlyX DKE48_016340 PF03279 Bacterial lipid A biosynthesis acyltransferase DKE48_016380 PF01416 tRNA pseudouridine synthase DKE48_016390 PF01176 Translation initiation factor 1A / IF-1 DKE48_016420 PF00330 Aconitase family (aconitate hydratase) DKE48_016430 PF03466 LysR substrate binding domain DKE48_016430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_016455 PF00293 NUDIX domain DKE48_016470 PF12706 Beta-lactamase superfamily domain DKE48_016475 PF03466 LysR substrate binding domain DKE48_016475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE48_016495 PF02798 Glutathione S-transferase, N-terminal domain DKE48_016500 PF08279 HTH domain DKE48_016500 PF13280 WYL domain DKE48_016570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE48_016570 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DKE48_016580 PF01197 Ribosomal protein L31 DKE48_016595 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DKE48_016615 PF03884 DNA gyrase inhibitor YacG DKE48_016620 PF00753 Metallo-beta-lactamase superfamily DKE48_016635 PF01177 Asp/Glu/Hydantoin racemase DKE48_016655 PF01206 Sulfurtransferase TusA DKE48_016660 PF00571 CBS domain DKE48_016660 PF03471 Transporter associated domain DKE48_016665 PF00795 Carbon-nitrogen hydrolase DKE48_016705 PF01430 Hsp33 protein DKE48_016725 PF01544 CorA-like Mg2+ transporter protein DKE48_016735 PF00312 Ribosomal protein S15 DKE48_016780 PF01209 ubiE/COQ5 methyltransferase family DKE48_016795 PF01494 FAD binding domain DKE48_016820 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE48_016835 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DKE48_016860 PF17384 RimP C-terminal SH3 domain DKE48_016860 PF02576 RimP N-terminal domain DKE48_016880 PF03840 Preprotein translocase SecG subunit DKE48_016890 PF00437 Type II/IV secretion system protein DKE48_016890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DKE48_016900 PF01478 Type IV leader peptidase family DKE48_016900 PF06750 Bacterial Peptidase A24 N-terminal domain DKE48_016905 PF01121 Dephospho-CoA kinase DKE48_016915 PF08032 RNA 2'-O ribose methyltransferase substrate binding DKE48_016915 PF00588 SpoU rRNA Methylase family DKE48_016940 PF03652 Holliday junction resolvase DKE48_016970 PF02805 Metal binding domain of Ada DKE48_016970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE48_016970 PF12833 Helix-turn-helix domain DKE48_016970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKE48_016975 PF01066 CDP-alcohol phosphatidyltransferase DKE48_017020 PF02803 Thiolase, C-terminal domain DKE48_017020 PF00108 Thiolase, N-terminal domain DKE48_017030 PF06821 Serine hydrolase DKE48_017035 PF00376 MerR family regulatory protein DKE48_017035 PF09278 MerR, DNA binding DKE48_017080 PF00561 alpha/beta hydrolase fold DKE48_017110 PF16320 Ribosomal protein L7/L12 dimerisation domain DKE48_017110 PF00542 Ribosomal protein L7/L12 C-terminal domain DKE48_017115 PF00466 Ribosomal protein L10 DKE48_017120 PF00687 Ribosomal protein L1p/L10e family DKE48_017125 PF00298 Ribosomal protein L11, RNA binding domain DKE48_017125 PF03946 Ribosomal protein L11, N-terminal domain DKE48_017130 PF02357 Transcription termination factor nusG DKE48_017130 PF00467 KOW motif DKE48_017175 PF13419 Haloacid dehalogenase-like hydrolase DKE48_017200 PF00816 H-NS histone family DKE48_017225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DKE48_017225 PF03900 Porphobilinogen deaminase, C-terminal domain DKE48_017230 PF00072 Response regulator receiver domain DKE48_017230 PF04397 LytTr DNA-binding domain DKE48_017245 PF04362 Bacterial Fe(2+) trafficking DKE48_017250 PF01895 PhoU domain DKE48_017260 PF00892 EamA-like transporter family DKE48_017275 PF13667 ThiC-associated domain DKE48_017275 PF01964 Radical SAM ThiC family DKE48_017285 PF00149 Calcineurin-like phosphoesterase DKE48_017290 PF01258 Prokaryotic dksA/traR C4-type zinc finger DKE48_017325 PF02899 Phage integrase, N-terminal SAM-like domain DKE48_017325 PF00589 Phage integrase family DKE48_017340 PF00291 Pyridoxal-phosphate dependent enzyme DKE48_017345 PF00768 D-alanyl-D-alanine carboxypeptidase DKE48_017350 PF00196 Bacterial regulatory proteins, luxR family DKE48_017350 PF00072 Response regulator receiver domain DKE48_017355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE48_017355 PF00512 His Kinase A (phospho-acceptor) domain DKE48_017365 PF00595 PDZ domain DKE48_017365 PF03572 Peptidase family S41 DKE48_017370 PF01676 Metalloenzyme superfamily DKE48_017370 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DKE48_017375 PF03739 Lipopolysaccharide export system permease LptF/LptG DKE48_017420 PF03477 ATP cone domain DKE48_017475 PF14461 Prokaryotic E2 family B DKE48_017475 PF00899 ThiF family DKE48_017520 PF07670 Nucleoside recognition DKE48_017520 PF07664 Ferrous iron transport protein B C terminus DKE48_017520 PF02421 Ferrous iron transport protein B DKE48_017530 PF01545 Cation efflux family DKE48_017535 PF13411 MerR HTH family regulatory protein DKE48_017545 PF07732 Multicopper oxidase DKE48_017545 PF00394 Multicopper oxidase DKE48_017545 PF07731 Multicopper oxidase DKE48_017555 PF00486 Transcriptional regulatory protein, C terminal DKE48_017555 PF00072 Response regulator receiver domain DKE48_017560 PF00512 His Kinase A (phospho-acceptor) domain DKE48_017560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE48_017560 PF00672 HAMP domain DKE48_017610 PF13335 Magnesium chelatase, subunit ChlI C-terminal DKE48_017610 PF01078 Magnesium chelatase, subunit ChlI DKE48_017620 PF00596 Class II Aldolase and Adducin N-terminal domain DKE48_017635 PF03573 outer membrane porin, OprD family DKE48_017665 PF07690 Major Facilitator Superfamily DKE48_017670 PF03458 UPF0126 domain DKE48_017675 PF02810 SEC-C motif DKE48_017685 PF03641 Possible lysine decarboxylase DKE48_017735 PF03358 NADPH-dependent FMN reductase DKE48_017750 PF00291 Pyridoxal-phosphate dependent enzyme DKE48_017835 PF00440 Bacterial regulatory proteins, tetR family DKE48_017860 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DKE48_017870 PF00231 ATP synthase DKE48_017875 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKE48_017875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE48_017875 PF00306 ATP synthase alpha/beta chain, C terminal domain DKE48_017890 PF00137 ATP synthase subunit C DKE48_017895 PF00119 ATP synthase A chain DKE48_017925 PF01810 LysE type translocator DKE48_017930 PF04261 Dyp-type peroxidase family DKE48_017960 PF02678 Pirin DKE48_017960 PF05726 Pirin C-terminal cupin domain DKE48_017970 PF01475 Ferric uptake regulator family DKE48_017980 PF13302 Acetyltransferase (GNAT) domain DKE48_018000 PF09335 SNARE associated Golgi protein DKE48_018025 PF01722 BolA-like protein DKE48_018070 PF00765 Autoinducer synthase DKE48_018080 PF00378 Enoyl-CoA hydratase/isomerase DKE48_018085 PF00378 Enoyl-CoA hydratase/isomerase DKE48_018095 PF00501 AMP-binding enzyme DKE48_018095 PF13193 AMP-binding enzyme C-terminal domain DKE48_018100 PF00501 AMP-binding enzyme DKE48_018100 PF13193 AMP-binding enzyme C-terminal domain DKE48_018110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKE48_018110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKE48_018135 PF01042 Endoribonuclease L-PSP DKE48_018140 PF00842 Alanine racemase, C-terminal domain DKE48_018140 PF01168 Alanine racemase, N-terminal domain DKE48_018150 PF01037 Lrp/AsnC ligand binding domain DKE48_018175 PF00849 RNA pseudouridylate synthase DKE48_018195 PF00440 Bacterial regulatory proteins, tetR family DKE48_018255 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE48_018255 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE48_018295 PF00285 Citrate synthase, C-terminal domain DKE48_018305 PF07729 FCD domain DKE48_018305 PF00392 Bacterial regulatory proteins, gntR family DKE48_018315 PF00155 Aminotransferase class I and II DKE48_018325 PF01070 FMN-dependent dehydrogenase DKE48_018330 PF07729 FCD domain DKE48_018330 PF00392 Bacterial regulatory proteins, gntR family DKE48_018355 PF16363 GDP-mannose 4,6 dehydratase DKE48_018370 PF00483 Nucleotidyl transferase DKE48_018380 PF00535 Glycosyl transferase family 2 DKE48_018400 PF00535 Glycosyl transferase family 2 DKE48_018400 PF01501 Glycosyl transferase family 8 DKE48_018410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DKE48_018410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DKE48_018410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DKE48_018415 PF02563 Polysaccharide biosynthesis/export protein DKE48_018415 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DKE48_018415 PF10531 SLBB domain DKE48_018435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DKE48_018435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE48_018455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DKE48_018455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DKE48_018470 PF01138 3' exoribonuclease family, domain 1 DKE48_018470 PF03725 3' exoribonuclease family, domain 2 DKE48_018485 PF00440 Bacterial regulatory proteins, tetR family DKE48_018490 PF08360 QacR-like protein, C-terminal region DKE48_018490 PF00440 Bacterial regulatory proteins, tetR family DKE48_018495 PF01323 DSBA-like thioredoxin domain DKE48_018505 PF13419 Haloacid dehalogenase-like hydrolase DKE48_018540 PF00296 Luciferase-like monooxygenase DKE48_018545 PF00528 Binding-protein-dependent transport system inner membrane component DKE48_018555 PF08362 YcdC-like protein, C-terminal region DKE48_018555 PF00440 Bacterial regulatory proteins, tetR family DKE48_018560 PF01048 Phosphorylase superfamily DKE48_018585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE48_018625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DKE48_018705 PF01225 Mur ligase family, catalytic domain DKE48_018705 PF02875 Mur ligase family, glutamate ligase domain DKE48_018705 PF08245 Mur ligase middle domain DKE48_018745 PF00156 Phosphoribosyl transferase domain DKE48_018755 PF10411 Disulfide bond isomerase protein N-terminus DKE48_018755 PF13098 Thioredoxin-like domain DKE48_018765 PF02583 Metal-sensitive transcriptional repressor DKE48_018780 PF01809 Putative membrane protein insertion efficiency factor DKE48_018785 PF00825 Ribonuclease P DKE48_018790 PF00468 Ribosomal protein L34 DKE48_018830 PF02796 Helix-turn-helix domain of resolvase DKE48_018830 PF00239 Resolvase, N terminal domain DKE48_018835 PF13610 DDE domain DKE48_018850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKE48_018850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKE48_018850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKE48_018850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKE48_018900 PF02661 Fic/DOC family DKE48_018930 PF11799 impB/mucB/samB family C-terminal domain DKE48_018930 PF13438 Domain of unknown function (DUF4113) DKE48_018930 PF00817 impB/mucB/samB family DKE48_018935 PF00717 Peptidase S24-like DKE48_018935 PF01726 LexA DNA binding domain DKE48_018960 PF13276 HTH-like domain DKE48_018960 PF00665 Integrase core domain DKE48_018960 PF13333 Integrase core domain DKE48_019110 PF01636 Phosphotransferase enzyme family DKE48_019135 PF01381 Helix-turn-helix DKE48_019215 PF13610 DDE domain DKE48_019230 PF13610 DDE domain DKE48_019310 PF13610 DDE domain DKE48_019320 PF02522 Aminoglycoside 3-N-acetyltransferase DKE48_019420 PF05973 Phage derived protein Gp49-like (DUF891) DKE48_019450 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE48_019450 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE48_019450 PF08659 KR domain DKE48_019450 PF00550 Phosphopantetheine attachment site DKE48_019450 PF16197 Ketoacyl-synthetase C-terminal extension DKE48_019450 PF08240 Alcohol dehydrogenase GroES-like domain DKE48_019450 PF14765 Polyketide synthase dehydratase DKE48_019450 PF00698 Acyl transferase domain DKE48_019470 PF00557 Metallopeptidase family M24 DKE48_019470 PF01321 Creatinase/Prolidase N-terminal domain DKE48_019485 PF02583 Metal-sensitive transcriptional repressor DKE48_019525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE48_019545 PF16884 N-terminal domain of oxidoreductase DKE48_019545 PF00107 Zinc-binding dehydrogenase DKE48_019625 PF13180 PDZ domain DKE48_019630 PF01435 Peptidase family M48 DKE48_019675 PF00085 Thioredoxin DKE48_019710 PF12728 Helix-turn-helix domain DKE48_019820 PF01051 Initiator Replication protein