locus-tag class description DKE50_000055 PF01521 Iron-sulphur cluster biosynthesis DKE50_000060 PF00561 alpha/beta hydrolase fold DKE50_000125 PF01189 16S rRNA methyltransferase RsmB/F DKE50_000125 PF01029 NusB family DKE50_000130 PF00551 Formyl transferase DKE50_000130 PF02911 Formyl transferase, C-terminal domain DKE50_000170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE50_000205 PF07690 Major Facilitator Superfamily DKE50_000210 PF00248 Aldo/keto reductase family DKE50_000235 PF08240 Alcohol dehydrogenase GroES-like domain DKE50_000235 PF00107 Zinc-binding dehydrogenase DKE50_000255 PF10576 Iron-sulfur binding domain of endonuclease III DKE50_000255 PF00633 Helix-hairpin-helix motif DKE50_000255 PF00730 HhH-GPD superfamily base excision DNA repair protein DKE50_000255 PF14815 NUDIX domain DKE50_000270 PF07043 Protein of unknown function (DUF1328) DKE50_000325 PF00857 Isochorismatase family DKE50_000330 PF01758 Sodium Bile acid symporter family DKE50_000335 PF01554 MatE DKE50_000345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE50_000360 PF02798 Glutathione S-transferase, N-terminal domain DKE50_000360 PF14497 Glutathione S-transferase, C-terminal domain DKE50_000420 PF01979 Amidohydrolase family DKE50_000435 PF13419 Haloacid dehalogenase-like hydrolase DKE50_000440 PF01177 Asp/Glu/Hydantoin racemase DKE50_000480 PF01381 Helix-turn-helix DKE50_000550 PF04608 Phosphatidylglycerophosphatase A DKE50_000555 PF00586 AIR synthase related protein, N-terminal domain DKE50_000555 PF02769 AIR synthase related protein, C-terminal domain DKE50_000560 PF01029 NusB family DKE50_000565 PF00885 6,7-dimethyl-8-ribityllumazine synthase DKE50_000605 PF02580 D-Tyr-tRNA(Tyr) deacylase DKE50_000615 PF00581 Rhodanese-like domain DKE50_000620 PF02666 Phosphatidylserine decarboxylase DKE50_000655 PF00106 short chain dehydrogenase DKE50_000665 PF00155 Aminotransferase class I and II DKE50_000670 PF04286 Protein of unknown function (DUF445) DKE50_000690 PF02600 Disulfide bond formation protein DsbB DKE50_000815 PF00576 HIUase/Transthyretin family DKE50_000870 PF03960 ArsC family DKE50_000875 PF03372 Endonuclease/Exonuclease/phosphatase family DKE50_000880 PF00156 Phosphoribosyl transferase domain DKE50_000905 PF03033 Glycosyltransferase family 28 N-terminal domain DKE50_000905 PF04101 Glycosyltransferase family 28 C-terminal domain DKE50_000915 PF01820 D-ala D-ala ligase N-terminus DKE50_000915 PF07478 D-ala D-ala ligase C-terminus DKE50_000920 PF03799 Cell division protein FtsQ DKE50_000920 PF08478 POTRA domain, FtsQ-type DKE50_000965 PF01169 Uncharacterized protein family UPF0016 DKE50_000970 PF01613 Flavin reductase like domain DKE50_000970 PF00258 Flavodoxin DKE50_001020 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DKE50_001050 PF01037 Lrp/AsnC ligand binding domain DKE50_001080 PF04341 Protein of unknown function, DUF485 DKE50_001085 PF00474 Sodium:solute symporter family DKE50_001115 PF00440 Bacterial regulatory proteins, tetR family DKE50_001115 PF16925 Tetracyclin repressor-like, C-terminal domain DKE50_001120 PF08240 Alcohol dehydrogenase GroES-like domain DKE50_001120 PF00107 Zinc-binding dehydrogenase DKE50_001185 PF00155 Aminotransferase class I and II DKE50_001185 PF00392 Bacterial regulatory proteins, gntR family DKE50_001270 PF03466 LysR substrate binding domain DKE50_001270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_001290 PF00248 Aldo/keto reductase family DKE50_001340 PF01638 HxlR-like helix-turn-helix DKE50_001355 PF00665 Integrase core domain DKE50_001355 PF13333 Integrase core domain DKE50_001355 PF13276 HTH-like domain DKE50_001540 PF03992 Antibiotic biosynthesis monooxygenase DKE50_001600 PF00583 Acetyltransferase (GNAT) family DKE50_001620 PF00486 Transcriptional regulatory protein, C terminal DKE50_001620 PF00072 Response regulator receiver domain DKE50_001630 PF01740 STAS domain DKE50_001630 PF00916 Sulfate permease family DKE50_001675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE50_001675 PF00529 HlyD membrane-fusion protein of T1SS DKE50_001745 PF01795 MraW methylase family DKE50_001765 PF01225 Mur ligase family, catalytic domain DKE50_001765 PF02875 Mur ligase family, glutamate ligase domain DKE50_001765 PF08245 Mur ligase middle domain DKE50_001780 PF13847 Methyltransferase domain DKE50_001810 PF07660 Secretin and TonB N terminus short domain DKE50_001810 PF00263 Bacterial type II and III secretion system protein DKE50_001810 PF11741 AMIN domain DKE50_001810 PF03958 Bacterial type II/III secretion system short domain DKE50_001815 PF01202 Shikimate kinase DKE50_001835 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE50_001835 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DKE50_001845 PF04011 LemA family DKE50_001885 PF04324 BFD-like [2Fe-2S] binding domain DKE50_001890 PF01042 Endoribonuclease L-PSP DKE50_001945 PF07963 Prokaryotic N-terminal methylation motif DKE50_001945 PF00114 Pilin (bacterial filament) DKE50_001950 PF00886 Ribosomal protein S16 DKE50_001955 PF05239 PRC-barrel domain DKE50_001955 PF01782 RimM N-terminal domain DKE50_001975 PF03280 Proteobacterial lipase chaperone protein DKE50_002025 PF03992 Antibiotic biosynthesis monooxygenase DKE50_002030 PF02525 Flavodoxin-like fold DKE50_002050 PF00080 Copper/zinc superoxide dismutase (SODC) DKE50_002100 PF00202 Aminotransferase class-III DKE50_002115 PF04996 Succinylarginine dihydrolase DKE50_002120 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DKE50_002170 PF02091 Glycyl-tRNA synthetase alpha subunit DKE50_002240 PF00459 Inositol monophosphatase family DKE50_002250 PF00005 ABC transporter DKE50_002255 PF02405 Permease MlaE DKE50_002280 PF03641 Possible lysine decarboxylase DKE50_002285 PF00293 NUDIX domain DKE50_002290 PF00156 Phosphoribosyl transferase domain DKE50_002310 PF01553 Acyltransferase DKE50_002340 PF00175 Oxidoreductase NAD-binding domain DKE50_002340 PF00970 Oxidoreductase FAD-binding domain DKE50_002340 PF00042 Globin DKE50_002360 PF00338 Ribosomal protein S10p/S20e DKE50_002380 PF00181 Ribosomal Proteins L2, RNA binding domain DKE50_002380 PF03947 Ribosomal Proteins L2, C-terminal domain DKE50_002385 PF00203 Ribosomal protein S19 DKE50_002400 PF00252 Ribosomal protein L16p/L10e DKE50_002405 PF00831 Ribosomal L29 protein DKE50_002410 PF00366 Ribosomal protein S17 DKE50_002430 PF00253 Ribosomal protein S14p/S29e DKE50_002440 PF00347 Ribosomal protein L6 DKE50_002445 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DKE50_002455 PF00327 Ribosomal protein L30p/L7e DKE50_002470 PF00444 Ribosomal protein L36 DKE50_002475 PF00416 Ribosomal protein S13/S18 DKE50_002480 PF00411 Ribosomal protein S11 DKE50_002485 PF00163 Ribosomal protein S4/S9 N-terminal domain DKE50_002485 PF01479 S4 domain DKE50_002515 PF03937 Flavinator of succinate dehydrogenase DKE50_002545 PF09526 Probable metal-binding protein (DUF2387) DKE50_002600 PF01557 Fumarylacetoacetate (FAA) hydrolase family DKE50_002605 PF12833 Helix-turn-helix domain DKE50_002610 PF00892 EamA-like transporter family DKE50_002620 PF03358 NADPH-dependent FMN reductase DKE50_002695 PF01066 CDP-alcohol phosphatidyltransferase DKE50_002780 PF00289 Biotin carboxylase, N-terminal domain DKE50_002780 PF00364 Biotin-requiring enzyme DKE50_002780 PF02785 Biotin carboxylase C-terminal domain DKE50_002780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE50_002810 PF04386 Stringent starvation protein B DKE50_002815 PF00043 Glutathione S-transferase, C-terminal domain DKE50_002815 PF13417 Glutathione S-transferase, N-terminal domain DKE50_002820 PF00380 Ribosomal protein S9/S16 DKE50_002835 PF00398 Ribosomal RNA adenine dimethylase DKE50_002860 PF16360 GTP-binding GTPase Middle Region DKE50_002860 PF01926 50S ribosome-binding GTPase DKE50_002860 PF13167 GTP-binding GTPase N-terminal DKE50_002880 PF01389 OmpA-like transmembrane domain DKE50_002880 PF00691 OmpA family DKE50_002935 PF04273 Putative phosphatase (DUF442) DKE50_002935 PF00753 Metallo-beta-lactamase superfamily DKE50_002945 PF00085 Thioredoxin DKE50_002950 PF03061 Thioesterase superfamily DKE50_002990 PF04279 Intracellular septation protein A DKE50_003000 PF01062 Bestrophin, RFP-TM, chloride channel DKE50_003005 PF04002 RadC-like JAB domain DKE50_003015 PF07549 SecD/SecF GG Motif DKE50_003015 PF02355 Protein export membrane protein DKE50_003025 PF02699 Preprotein translocase subunit DKE50_003065 PF01063 Amino-transferase class IV DKE50_003270 PF08245 Mur ligase middle domain DKE50_003270 PF02875 Mur ligase family, glutamate ligase domain DKE50_003285 PF00753 Metallo-beta-lactamase superfamily DKE50_003350 PF02515 CoA-transferase family III DKE50_003375 PF00893 Small Multidrug Resistance protein DKE50_003385 PF00108 Thiolase, N-terminal domain DKE50_003385 PF02803 Thiolase, C-terminal domain DKE50_003425 PF01741 Large-conductance mechanosensitive channel, MscL DKE50_003455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE50_003490 PF08274 PhnA Zinc-Ribbon DKE50_003490 PF03831 PhnA domain DKE50_003525 PF00072 Response regulator receiver domain DKE50_003640 PF00881 Nitroreductase family DKE50_003705 PF02686 Glu-tRNAGln amidotransferase C subunit DKE50_003715 PF04085 rod shape-determining protein MreC DKE50_003725 PF02545 Maf-like protein DKE50_003730 PF00575 S1 RNA binding domain DKE50_003730 PF10150 Ribonuclease E/G family DKE50_003760 PF02525 Flavodoxin-like fold DKE50_003830 PF00293 NUDIX domain DKE50_003830 PF09297 NADH pyrophosphatase zinc ribbon domain DKE50_003840 PF04303 PrpF protein DKE50_003850 PF04237 YjbR DKE50_003855 PF01145 SPFH domain / Band 7 family DKE50_003865 PF01734 Patatin-like phospholipase DKE50_003955 PF01906 Putative heavy-metal-binding DKE50_003960 PF01906 Putative heavy-metal-binding DKE50_003990 PF00348 Polyprenyl synthetase DKE50_004000 PF00829 Ribosomal prokaryotic L21 protein DKE50_004005 PF01016 Ribosomal L27 protein DKE50_004010 PF03548 Outer membrane lipoprotein carrier protein LolA DKE50_004030 PF00588 SpoU rRNA Methylase family DKE50_004040 PF03358 NADPH-dependent FMN reductase DKE50_004045 PF13520 Amino acid permease DKE50_004065 PF04359 Protein of unknown function (DUF493) DKE50_004100 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKE50_004105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKE50_004160 PF05661 Protein of unknown function (DUF808) DKE50_004165 PF04228 Putative neutral zinc metallopeptidase DKE50_004265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE50_004275 PF00582 Universal stress protein family DKE50_004290 PF00440 Bacterial regulatory proteins, tetR family DKE50_004305 PF00117 Glutamine amidotransferase class-I DKE50_004305 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DKE50_004375 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DKE50_004375 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DKE50_004400 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DKE50_004400 PF01266 FAD dependent oxidoreductase DKE50_004495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE50_004495 PF00529 HlyD membrane-fusion protein of T1SS DKE50_004500 PF00873 AcrB/AcrD/AcrF family DKE50_004520 PF07690 Major Facilitator Superfamily DKE50_004535 PF02417 Chromate transporter DKE50_004560 PF01219 Prokaryotic diacylglycerol kinase DKE50_004585 PF01435 Peptidase family M48 DKE50_004600 PF01171 PP-loop family DKE50_004610 PF01464 Transglycosylase SLT domain DKE50_004610 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE50_004640 PF09857 Putative toxin of bacterial toxin-antitoxin pair DKE50_004645 PF13359 DDE superfamily endonuclease DKE50_004645 PF13613 Helix-turn-helix of DDE superfamily endonuclease DKE50_004735 PF00216 Bacterial DNA-binding protein DKE50_004760 PF00881 Nitroreductase family DKE50_004775 PF02595 Glycerate kinase family DKE50_004785 PF02634 FdhD/NarQ family DKE50_004790 PF06803 Protein of unknown function (DUF1232) DKE50_004835 PF01678 Diaminopimelate epimerase DKE50_004840 PF00561 alpha/beta hydrolase fold DKE50_004845 PF01810 LysE type translocator DKE50_004860 PF00766 Electron transfer flavoprotein FAD-binding domain DKE50_004860 PF01012 Electron transfer flavoprotein domain DKE50_004955 PF00005 ABC transporter DKE50_004980 PF00551 Formyl transferase DKE50_004995 PF11638 DnaA N-terminal domain DKE50_004995 PF08299 Bacterial dnaA protein helix-turn-helix DKE50_004995 PF00308 Bacterial dnaA protein DKE50_005055 PF02472 Biopolymer transport protein ExbD/TolR DKE50_005065 PF03061 Thioesterase superfamily DKE50_005075 PF05496 Holliday junction DNA helicase RuvB P-loop domain DKE50_005075 PF05491 RuvB C-terminal winged helix domain DKE50_005075 PF17864 RuvB AAA lid domain DKE50_005100 PF07690 Major Facilitator Superfamily DKE50_005115 PF01784 NIF3 (NGG1p interacting factor 3) DKE50_005120 PF00378 Enoyl-CoA hydratase/isomerase DKE50_005160 PF04055 Radical SAM superfamily DKE50_005180 PF12857 TOBE-like domain DKE50_005180 PF00005 ABC transporter DKE50_005190 PF00528 Binding-protein-dependent transport system inner membrane component DKE50_005205 PF01063 Amino-transferase class IV DKE50_005215 PF02223 Thymidylate kinase DKE50_005260 PF14622 Ribonuclease-III-like DKE50_005260 PF00035 Double-stranded RNA binding motif DKE50_005265 PF01926 50S ribosome-binding GTPase DKE50_005265 PF07650 KH domain DKE50_005365 PF01018 GTP1/OBG DKE50_005365 PF01926 50S ribosome-binding GTPase DKE50_005435 PF13340 Putative transposase of IS4/5 family (DUF4096) DKE50_005455 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE50_005550 PF00202 Aminotransferase class-III DKE50_005675 PF08328 Adenylosuccinate lyase C-terminal DKE50_005675 PF00206 Lyase DKE50_005690 PF00293 NUDIX domain DKE50_005695 PF00132 Bacterial transferase hexapeptide (six repeats) DKE50_005700 PF00768 D-alanyl-D-alanine carboxypeptidase DKE50_005700 PF07943 Penicillin-binding protein 5, C-terminal domain DKE50_005720 PF01476 LysM domain DKE50_005720 PF01551 Peptidase family M23 DKE50_005740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE50_005750 PF01197 Ribosomal protein L31 DKE50_005765 PF04055 Radical SAM superfamily DKE50_005770 PF09285 Elongation factor P, C-terminal DKE50_005770 PF01132 Elongation factor P (EF-P) OB domain DKE50_005770 PF08207 Elongation factor P (EF-P) KOW-like domain DKE50_005825 PF02678 Pirin DKE50_005825 PF17954 Quercetinase C-terminal cupin domain DKE50_005835 PF01208 Uroporphyrinogen decarboxylase (URO-D) DKE50_005895 PF00591 Glycosyl transferase family, a/b domain DKE50_005895 PF02885 Glycosyl transferase family, helical bundle domain DKE50_005935 PF01040 UbiA prenyltransferase family DKE50_005970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DKE50_005970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DKE50_005975 PF01784 NIF3 (NGG1p interacting factor 3) DKE50_006000 PF04452 RNA methyltransferase DKE50_006005 PF02219 Methylenetetrahydrofolate reductase DKE50_006030 PF04055 Radical SAM superfamily DKE50_006095 PF03330 Lytic transglycolase DKE50_006095 PF05036 Sporulation related domain DKE50_006100 PF13406 Transglycosylase SLT domain DKE50_006130 PF00589 Phage integrase family DKE50_006230 PF00772 DnaB-like helicase N terminal domain DKE50_006230 PF03796 DnaB-like helicase C terminal domain DKE50_006515 PF00528 Binding-protein-dependent transport system inner membrane component DKE50_006525 PF00893 Small Multidrug Resistance protein DKE50_006545 PF02567 Phenazine biosynthesis-like protein DKE50_006555 PF01980 tRNA-methyltransferase O DKE50_006555 PF18389 TrmO C-terminal domain DKE50_006570 PF04076 Bacterial OB fold (BOF) protein DKE50_006575 PF00072 Response regulator receiver domain DKE50_006575 PF00486 Transcriptional regulatory protein, C terminal DKE50_006580 PF00512 His Kinase A (phospho-acceptor) domain DKE50_006580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE50_006580 PF08521 Two-component sensor kinase N-terminal DKE50_006590 PF00293 NUDIX domain DKE50_006605 PF01513 ATP-NAD kinase DKE50_006610 PF07023 Protein of unknown function (DUF1315) DKE50_006630 PF02770 Acyl-CoA dehydrogenase, middle domain DKE50_006630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE50_006630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE50_006645 PF00800 Prephenate dehydratase DKE50_006645 PF01817 Chorismate mutase type II DKE50_006645 PF01842 ACT domain DKE50_006680 PF03883 Peroxide stress protein YaaA DKE50_006695 PF04241 Protein of unknown function (DUF423) DKE50_006710 PF00313 'Cold-shock' DNA-binding domain DKE50_006730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DKE50_006730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DKE50_006755 PF02674 Colicin V production protein DKE50_006785 PF09424 Yqey-like protein DKE50_006790 PF01165 Ribosomal protein S21 DKE50_006875 PF13359 DDE superfamily endonuclease DKE50_006875 PF13613 Helix-turn-helix of DDE superfamily endonuclease DKE50_006905 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family DKE50_006945 PF13276 HTH-like domain DKE50_006945 PF00665 Integrase core domain DKE50_006945 PF13333 Integrase core domain DKE50_007010 PF13649 Methyltransferase domain DKE50_007110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_007110 PF03466 LysR substrate binding domain DKE50_007165 PF04403 Paraquat-inducible protein A DKE50_007180 PF00576 HIUase/Transthyretin family DKE50_007190 PF00072 Response regulator receiver domain DKE50_007190 PF00486 Transcriptional regulatory protein, C terminal DKE50_007195 PF00512 His Kinase A (phospho-acceptor) domain DKE50_007195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE50_007195 PF00672 HAMP domain DKE50_007235 PF08521 Two-component sensor kinase N-terminal DKE50_007235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE50_007235 PF00512 His Kinase A (phospho-acceptor) domain DKE50_007240 PF00072 Response regulator receiver domain DKE50_007240 PF00486 Transcriptional regulatory protein, C terminal DKE50_007255 PF00892 EamA-like transporter family DKE50_007260 PF07995 Glucose / Sorbosone dehydrogenase DKE50_007280 PF00375 Sodium:dicarboxylate symporter family DKE50_007325 PF02843 Phosphoribosylglycinamide synthetase, C domain DKE50_007325 PF02844 Phosphoribosylglycinamide synthetase, N domain DKE50_007325 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DKE50_007335 PF02954 Bacterial regulatory protein, Fis family DKE50_007380 PF08379 Bacterial transglutaminase-like N-terminal region DKE50_007380 PF01841 Transglutaminase-like superfamily DKE50_007405 PF01084 Ribosomal protein S18 DKE50_007410 PF01250 Ribosomal protein S6 DKE50_007420 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DKE50_007430 PF00115 Cytochrome C and Quinol oxidase polypeptide I DKE50_007435 PF06481 COX Aromatic Rich Motif DKE50_007435 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DKE50_007485 PF00296 Luciferase-like monooxygenase DKE50_007515 PF03462 PCRF domain DKE50_007515 PF00472 RF-1 domain DKE50_007520 PF13847 Methyltransferase domain DKE50_007520 PF17827 PrmC N-terminal domain DKE50_007540 PF00106 short chain dehydrogenase DKE50_007555 PF01613 Flavin reductase like domain DKE50_007560 PF00899 ThiF family DKE50_007565 PF03109 ABC1 family DKE50_007590 PF02669 K+-transporting ATPase, c chain DKE50_007615 PF03232 Ubiquinone biosynthesis protein COQ7 DKE50_007695 PF01381 Helix-turn-helix DKE50_008010 PF04284 Protein of unknown function (DUF441) DKE50_008040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DKE50_008055 PF17209 Hfq protein DKE50_008090 PF00958 GMP synthase C terminal domain DKE50_008090 PF02540 NAD synthase DKE50_008090 PF00117 Glutamine amidotransferase class-I DKE50_008105 PF13520 Amino acid permease DKE50_008140 PF06445 GyrI-like small molecule binding domain DKE50_008185 PF13953 PapC C-terminal domain DKE50_008185 PF00577 Outer membrane usher protein DKE50_008185 PF13954 PapC N-terminal domain DKE50_008205 PF02798 Glutathione S-transferase, N-terminal domain DKE50_008220 PF01817 Chorismate mutase type II DKE50_008260 PF03328 HpcH/HpaI aldolase/citrate lyase family DKE50_008290 PF00924 Mechanosensitive ion channel DKE50_008335 PF12848 ABC transporter DKE50_008335 PF16326 ABC transporter C-terminal domain DKE50_008335 PF00005 ABC transporter DKE50_008360 PF02308 MgtC family DKE50_008450 PF00465 Iron-containing alcohol dehydrogenase DKE50_008475 PF01451 Low molecular weight phosphotyrosine protein phosphatase DKE50_008565 PF00005 ABC transporter DKE50_008570 PF00072 Response regulator receiver domain DKE50_008570 PF00486 Transcriptional regulatory protein, C terminal DKE50_008585 PF04324 BFD-like [2Fe-2S] binding domain DKE50_008585 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DKE50_008585 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DKE50_008585 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE50_008585 PF18267 Rubredoxin NAD+ reductase C-terminal domain DKE50_008610 PF06463 Molybdenum Cofactor Synthesis C DKE50_008610 PF04055 Radical SAM superfamily DKE50_008620 PF02391 MoaE protein DKE50_008635 PF01638 HxlR-like helix-turn-helix DKE50_008665 PF02635 DsrE/DsrF-like family DKE50_008670 PF16363 GDP-mannose 4,6 dehydratase DKE50_008710 PF02542 YgbB family DKE50_008745 PF00696 Amino acid kinase family DKE50_008765 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DKE50_008765 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DKE50_008765 PF13288 DXP reductoisomerase C-terminal domain DKE50_008775 PF01103 Surface antigen DKE50_008775 PF07244 Surface antigen variable number repeat DKE50_008810 PF02631 RecX family DKE50_008850 PF00266 Aminotransferase class-V DKE50_008875 PF00916 Sulfate permease family DKE50_008875 PF01740 STAS domain DKE50_008880 PF00916 Sulfate permease family DKE50_008880 PF01740 STAS domain DKE50_008890 PF00872 Transposase, Mutator family DKE50_008970 PF03466 LysR substrate binding domain DKE50_008970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_008985 PF00202 Aminotransferase class-III DKE50_008990 PF01380 SIS domain DKE50_008990 PF00571 CBS domain DKE50_009040 PF08173 Membrane bound YbgT-like protein DKE50_009085 PF02253 Phospholipase A1 DKE50_009095 PF02254 TrkA-N domain DKE50_009095 PF02080 TrkA-C domain DKE50_009105 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DKE50_009130 PF02617 ATP-dependent Clp protease adaptor protein ClpS DKE50_009185 PF00117 Glutamine amidotransferase class-I DKE50_009185 PF06418 CTP synthase N-terminus DKE50_009200 PF04239 Protein of unknown function (DUF421) DKE50_009210 PF04977 Septum formation initiator DKE50_009220 PF01144 Coenzyme A transferase DKE50_009245 PF07690 Major Facilitator Superfamily DKE50_009250 PF02627 Carboxymuconolactone decarboxylase family DKE50_009260 PF00775 Dioxygenase DKE50_009290 PF04143 Sulphur transport DKE50_009310 PF03466 LysR substrate binding domain DKE50_009310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_009330 PF00106 short chain dehydrogenase DKE50_009355 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DKE50_009390 PF01613 Flavin reductase like domain DKE50_009430 PF01144 Coenzyme A transferase DKE50_009445 PF02426 Muconolactone delta-isomerase DKE50_009465 PF00392 Bacterial regulatory proteins, gntR family DKE50_009465 PF07729 FCD domain DKE50_009510 PF01872 RibD C-terminal domain DKE50_009560 PF00440 Bacterial regulatory proteins, tetR family DKE50_009560 PF16295 Tetracyclin repressor-like, C-terminal domain DKE50_009565 PF13359 DDE superfamily endonuclease DKE50_009565 PF13613 Helix-turn-helix of DDE superfamily endonuclease DKE50_009595 PF04909 Amidohydrolase DKE50_009640 PF00171 Aldehyde dehydrogenase family DKE50_009670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKE50_009670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKE50_009685 PF00005 ABC transporter DKE50_009705 PF14572 Phosphoribosyl synthetase-associated domain DKE50_009705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKE50_009735 PF01425 Amidase DKE50_009770 PF01975 Survival protein SurE DKE50_009780 PF04607 Region found in RelA / SpoT proteins DKE50_009780 PF13291 ACT domain DKE50_009780 PF02824 TGS domain DKE50_009815 PF00106 short chain dehydrogenase DKE50_009825 PF03466 LysR substrate binding domain DKE50_009825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_009855 PF00072 Response regulator receiver domain DKE50_009855 PF00486 Transcriptional regulatory protein, C terminal DKE50_009885 PF02753 Pili assembly chaperone PapD, C-terminal domain DKE50_009885 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DKE50_009905 PF08240 Alcohol dehydrogenase GroES-like domain DKE50_009905 PF00107 Zinc-binding dehydrogenase DKE50_009940 PF13091 PLD-like domain DKE50_009970 PF04055 Radical SAM superfamily DKE50_009970 PF13186 Iron-sulfur cluster-binding domain DKE50_009975 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DKE50_009980 PF03070 TENA/THI-4/PQQC family DKE50_010020 PF00857 Isochorismatase family DKE50_010020 PF00550 Phosphopantetheine attachment site DKE50_010085 PF00528 Binding-protein-dependent transport system inner membrane component DKE50_010095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_010095 PF03459 TOBE domain DKE50_010105 PF00866 Ring hydroxylating beta subunit DKE50_010115 PF14525 AraC-binding-like domain DKE50_010115 PF12833 Helix-turn-helix domain DKE50_010125 PF01613 Flavin reductase like domain DKE50_010140 PF01738 Dienelactone hydrolase family DKE50_010145 PF07690 Major Facilitator Superfamily DKE50_010210 PF01144 Coenzyme A transferase DKE50_010220 PF00108 Thiolase, N-terminal domain DKE50_010220 PF02803 Thiolase, C-terminal domain DKE50_010225 PF03466 LysR substrate binding domain DKE50_010225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_010325 PF01925 Sulfite exporter TauE/SafE DKE50_010335 PF04273 Putative phosphatase (DUF442) DKE50_010335 PF00753 Metallo-beta-lactamase superfamily DKE50_010340 PF04273 Putative phosphatase (DUF442) DKE50_010340 PF00753 Metallo-beta-lactamase superfamily DKE50_010355 PF00107 Zinc-binding dehydrogenase DKE50_010355 PF08240 Alcohol dehydrogenase GroES-like domain DKE50_010365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKE50_010365 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE50_010375 PF02779 Transketolase, pyrimidine binding domain DKE50_010375 PF02780 Transketolase, C-terminal domain DKE50_010380 PF00676 Dehydrogenase E1 component DKE50_010385 PF04055 Radical SAM superfamily DKE50_010400 PF00990 Diguanylate cyclase, GGDEF domain DKE50_010400 PF08448 PAS fold DKE50_010410 PF05175 Methyltransferase small domain DKE50_010425 PF01434 Peptidase family M41 DKE50_010425 PF17862 AAA+ lid domain DKE50_010425 PF00004 ATPase family associated with various cellular activities (AAA) DKE50_010435 PF05166 YcgL domain DKE50_010485 PF08241 Methyltransferase domain DKE50_010505 PF13359 DDE superfamily endonuclease DKE50_010505 PF13613 Helix-turn-helix of DDE superfamily endonuclease DKE50_010520 PF01230 HIT domain DKE50_010570 PF02684 Lipid-A-disaccharide synthetase DKE50_010595 PF01925 Sulfite exporter TauE/SafE DKE50_010615 PF02654 Cobalamin-5-phosphate synthase DKE50_010635 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DKE50_010655 PF04073 Aminoacyl-tRNA editing domain DKE50_010675 PF02770 Acyl-CoA dehydrogenase, middle domain DKE50_010675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE50_010675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE50_010680 PF00487 Fatty acid desaturase DKE50_010685 PF12852 Cupin DKE50_010685 PF12833 Helix-turn-helix domain DKE50_010710 PF02082 Transcriptional regulator DKE50_010715 PF00266 Aminotransferase class-V DKE50_010785 PF01649 Ribosomal protein S20 DKE50_010810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE50_010810 PF00005 ABC transporter DKE50_010905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DKE50_010920 PF00575 S1 RNA binding domain DKE50_010935 PF14437 MafB19-like deaminase DKE50_010945 PF03167 Uracil DNA glycosylase superfamily DKE50_010965 PF02501 Type II secretion system (T2SS), protein I DKE50_010965 PF07963 Prokaryotic N-terminal methylation motif DKE50_010980 PF01026 TatD related DNase DKE50_010995 PF02348 Cytidylyltransferase DKE50_011055 PF01116 Fructose-bisphosphate aldolase class-II DKE50_011080 PF08007 Cupin superfamily protein DKE50_011105 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DKE50_011110 PF00664 ABC transporter transmembrane region DKE50_011110 PF00005 ABC transporter DKE50_011120 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DKE50_011120 PF12833 Helix-turn-helix domain DKE50_011125 PF01597 Glycine cleavage H-protein DKE50_011130 PF02146 Sir2 family DKE50_011135 PF00474 Sodium:solute symporter family DKE50_011140 PF01037 Lrp/AsnC ligand binding domain DKE50_011150 PF04229 GrpB protein DKE50_011155 PF05958 tRNA (Uracil-5-)-methyltransferase DKE50_011175 PF04264 YceI-like domain DKE50_011190 PF00438 S-adenosylmethionine synthetase, N-terminal domain DKE50_011190 PF02773 S-adenosylmethionine synthetase, C-terminal domain DKE50_011190 PF02772 S-adenosylmethionine synthetase, central domain DKE50_011235 PF06968 Biotin and Thiamin Synthesis associated domain DKE50_011235 PF04055 Radical SAM superfamily DKE50_011255 PF02753 Pili assembly chaperone PapD, C-terminal domain DKE50_011255 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DKE50_011285 PF00892 EamA-like transporter family DKE50_011325 PF00440 Bacterial regulatory proteins, tetR family DKE50_011340 PF01709 Transcriptional regulator DKE50_011345 PF01037 Lrp/AsnC ligand binding domain DKE50_011410 PF00528 Binding-protein-dependent transport system inner membrane component DKE50_011440 PF03591 AzlC protein DKE50_011445 PF05437 Branched-chain amino acid transport protein (AzlD) DKE50_011455 PF02222 ATP-grasp domain DKE50_011475 PF12833 Helix-turn-helix domain DKE50_011475 PF12852 Cupin DKE50_011485 PF01641 SelR domain DKE50_011510 PF00588 SpoU rRNA Methylase family DKE50_011575 PF01654 Cytochrome bd terminal oxidase subunit I DKE50_011590 PF00155 Aminotransferase class I and II DKE50_011590 PF00392 Bacterial regulatory proteins, gntR family DKE50_011625 PF04172 LrgB-like family DKE50_011635 PF03466 LysR substrate binding domain DKE50_011635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_011645 PF02798 Glutathione S-transferase, N-terminal domain DKE50_011650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_011650 PF03466 LysR substrate binding domain DKE50_011660 PF00581 Rhodanese-like domain DKE50_011700 PF00005 ABC transporter DKE50_011745 PF00072 Response regulator receiver domain DKE50_011760 PF01037 Lrp/AsnC ligand binding domain DKE50_011760 PF13404 AsnC-type helix-turn-helix domain DKE50_011875 PF00440 Bacterial regulatory proteins, tetR family DKE50_011880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE50_011880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE50_011880 PF02770 Acyl-CoA dehydrogenase, middle domain DKE50_011940 PF01144 Coenzyme A transferase DKE50_011960 PF00378 Enoyl-CoA hydratase/isomerase DKE50_012015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE50_012015 PF02770 Acyl-CoA dehydrogenase, middle domain DKE50_012015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE50_012035 PF01266 FAD dependent oxidoreductase DKE50_012055 PF00392 Bacterial regulatory proteins, gntR family DKE50_012055 PF07702 UTRA domain DKE50_012070 PF02525 Flavodoxin-like fold DKE50_012075 PF03466 LysR substrate binding domain DKE50_012075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_012100 PF12146 Serine aminopeptidase, S33 DKE50_012115 PF01636 Phosphotransferase enzyme family DKE50_012125 PF12833 Helix-turn-helix domain DKE50_012125 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DKE50_012160 PF00300 Histidine phosphatase superfamily (branch 1) DKE50_012170 PF03061 Thioesterase superfamily DKE50_012180 PF07848 PaaX-like protein DKE50_012180 PF08223 PaaX-like protein C-terminal domain DKE50_012205 PF00378 Enoyl-CoA hydratase/isomerase DKE50_012225 PF06243 Phenylacetic acid degradation B DKE50_012230 PF05138 Phenylacetic acid catabolic protein DKE50_012240 PF03313 Serine dehydratase alpha chain DKE50_012240 PF03315 Serine dehydratase beta chain DKE50_012250 PF00376 MerR family regulatory protein DKE50_012250 PF09278 MerR, DNA binding DKE50_012265 PF02677 Epoxyqueuosine reductase QueH DKE50_012285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DKE50_012290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_012290 PF03466 LysR substrate binding domain DKE50_012330 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE50_012340 PF08753 NikR C terminal nickel binding domain DKE50_012340 PF01402 Ribbon-helix-helix protein, copG family DKE50_012355 PF01638 HxlR-like helix-turn-helix DKE50_012405 PF13333 Integrase core domain DKE50_012405 PF00665 Integrase core domain DKE50_012405 PF13276 HTH-like domain DKE50_012445 PF07286 Protein of unknown function (DUF1445) DKE50_012450 PF03746 LamB/YcsF family DKE50_012455 PF01566 Natural resistance-associated macrophage protein DKE50_012480 PF05114 Protein of unknown function (DUF692) DKE50_012505 PF06629 MltA-interacting protein MipA DKE50_012510 PF00202 Aminotransferase class-III DKE50_012555 PF04717 Type VI secretion system, phage-baseplate injector DKE50_012555 PF16671 Actin cross-linking domain DKE50_012570 PF13333 Integrase core domain DKE50_012570 PF00665 Integrase core domain DKE50_012570 PF13276 HTH-like domain DKE50_012645 PF00313 'Cold-shock' DNA-binding domain DKE50_012650 PF00117 Glutamine amidotransferase class-I DKE50_012665 PF01037 Lrp/AsnC ligand binding domain DKE50_012735 PF03466 LysR substrate binding domain DKE50_012735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_012740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE50_012740 PF02770 Acyl-CoA dehydrogenase, middle domain DKE50_012740 PF12806 Acetyl-CoA dehydrogenase C-terminal like DKE50_012740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE50_012750 PF00106 short chain dehydrogenase DKE50_012775 PF00037 4Fe-4S binding domain DKE50_012775 PF11953 Domain of unknown function (DUF3470) DKE50_012785 PF01596 O-methyltransferase DKE50_012800 PF01205 Uncharacterized protein family UPF0029 DKE50_012820 PF12399 Branched-chain amino acid ATP-binding cassette transporter DKE50_012820 PF00005 ABC transporter DKE50_012825 PF03968 OstA-like protein DKE50_012840 PF00571 CBS domain DKE50_012840 PF01380 SIS domain DKE50_012910 PF00313 'Cold-shock' DNA-binding domain DKE50_013005 PF06099 Phenol hydroxylase subunit DKE50_013015 PF02406 MmoB/DmpM family DKE50_013020 PF02332 Methane/Phenol/Toluene Hydroxylase DKE50_013020 PF04945 YHS domain DKE50_013030 PF00970 Oxidoreductase FAD-binding domain DKE50_013030 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE50_013030 PF00175 Oxidoreductase NAD-binding domain DKE50_013050 PF00866 Ring hydroxylating beta subunit DKE50_013110 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE50_013110 PF13192 Thioredoxin domain DKE50_013130 PF02390 Putative methyltransferase DKE50_013135 PF00043 Glutathione S-transferase, C-terminal domain DKE50_013135 PF13417 Glutathione S-transferase, N-terminal domain DKE50_013200 PF13545 Crp-like helix-turn-helix domain DKE50_013200 PF00027 Cyclic nucleotide-binding domain DKE50_013205 PF00248 Aldo/keto reductase family DKE50_013220 PF00709 Adenylosuccinate synthetase DKE50_013225 PF13393 Histidyl-tRNA synthetase DKE50_013230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKE50_013230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKE50_013335 PF06381 Protein of unknown function (DUF1073) DKE50_013425 PF00106 short chain dehydrogenase DKE50_013440 PF00440 Bacterial regulatory proteins, tetR family DKE50_013440 PF17932 Tetracyclin repressor-like, C-terminal domain DKE50_013475 PF00106 short chain dehydrogenase DKE50_013480 PF07859 alpha/beta hydrolase fold DKE50_013530 PF00378 Enoyl-CoA hydratase/isomerase DKE50_013535 PF00171 Aldehyde dehydrogenase family DKE50_013565 PF00892 EamA-like transporter family DKE50_013585 PF04958 Arginine N-succinyltransferase beta subunit DKE50_013610 PF00392 Bacterial regulatory proteins, gntR family DKE50_013610 PF07729 FCD domain DKE50_013645 PF05643 Putative bacterial lipoprotein (DUF799) DKE50_013655 PF03783 Curli production assembly/transport component CsgG DKE50_013730 PF01979 Amidohydrolase family DKE50_013750 PF00593 TonB dependent receptor DKE50_013750 PF07715 TonB-dependent Receptor Plug Domain DKE50_013760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE50_013760 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE50_013770 PF12911 N-terminal TM domain of oligopeptide transport permease C DKE50_013770 PF00528 Binding-protein-dependent transport system inner membrane component DKE50_013800 PF09297 NADH pyrophosphatase zinc ribbon domain DKE50_013800 PF00293 NUDIX domain DKE50_013810 PF04972 BON domain DKE50_013815 PF02021 Uncharacterised protein family UPF0102 DKE50_013935 PF02590 Predicted SPOUT methyltransferase DKE50_013940 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DKE50_013970 PF05191 Adenylate kinase, active site lid DKE50_014005 PF02492 CobW/HypB/UreG, nucleotide-binding domain DKE50_014015 PF05194 UreE urease accessory protein, C-terminal domain DKE50_014015 PF02814 UreE urease accessory protein, N-terminal domain DKE50_014030 PF00699 Urease beta subunit DKE50_014035 PF00547 Urease, gamma subunit DKE50_014085 PF00009 Elongation factor Tu GTP binding domain DKE50_014100 PF14052 Capsule assembly protein Wzi DKE50_014105 PF01336 OB-fold nucleic acid binding domain DKE50_014105 PF00152 tRNA synthetases class II (D, K and N) DKE50_014120 PF00301 Rubredoxin DKE50_014130 PF00561 alpha/beta hydrolase fold DKE50_014150 PF00912 Transglycosylase DKE50_014170 PF13472 GDSL-like Lipase/Acylhydrolase family DKE50_014175 PF00484 Carbonic anhydrase DKE50_014290 PF01327 Polypeptide deformylase DKE50_014345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE50_014355 PF00355 Rieske [2Fe-2S] domain DKE50_014370 PF09339 IclR helix-turn-helix domain DKE50_014370 PF01614 Bacterial transcriptional regulator DKE50_014395 PF00378 Enoyl-CoA hydratase/isomerase DKE50_014415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE50_014420 PF07152 YaeQ protein DKE50_014440 PF03061 Thioesterase superfamily DKE50_014485 PF02574 Homocysteine S-methyltransferase DKE50_014670 PF01464 Transglycosylase SLT domain DKE50_014670 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE50_014900 PF12320 Type 5 capsule protein repressor C-terminal domain DKE50_014900 PF00149 Calcineurin-like phosphoesterase DKE50_014910 PF02673 Bacitracin resistance protein BacA DKE50_014915 PF01168 Alanine racemase, N-terminal domain DKE50_014920 PF00437 Type II/IV secretion system protein DKE50_014930 PF01475 Ferric uptake regulator family DKE50_014935 PF04355 SmpA / OmlA family DKE50_014940 PF03658 RnfH family Ubiquitin DKE50_014955 PF01814 Hemerythrin HHE cation binding domain DKE50_014980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKE50_014980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKE50_014980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKE50_014980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKE50_014990 PF00580 UvrD/REP helicase N-terminal domain DKE50_014990 PF13361 UvrD-like helicase C-terminal domain DKE50_014995 PF00691 OmpA family DKE50_014995 PF13488 Glycine zipper DKE50_015055 PF00583 Acetyltransferase (GNAT) family DKE50_015100 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE50_015100 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE50_015110 PF02678 Pirin DKE50_015110 PF05726 Pirin C-terminal cupin domain DKE50_015120 PF00795 Carbon-nitrogen hydrolase DKE50_015120 PF02540 NAD synthase DKE50_015135 PF00111 2Fe-2S iron-sulfur cluster binding domain DKE50_015135 PF00175 Oxidoreductase NAD-binding domain DKE50_015135 PF00970 Oxidoreductase FAD-binding domain DKE50_015140 PF00171 Aldehyde dehydrogenase family DKE50_015150 PF07859 alpha/beta hydrolase fold DKE50_015190 PF01467 Cytidylyltransferase-like DKE50_015195 PF00589 Phage integrase family DKE50_015195 PF13356 Arm DNA-binding domain DKE50_015480 PF01668 SmpB protein DKE50_015485 PF03358 NADPH-dependent FMN reductase DKE50_015500 PF13525 Outer membrane lipoprotein DKE50_015510 PF01488 Shikimate / quinate 5-dehydrogenase DKE50_015510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DKE50_015510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DKE50_015550 PF14572 Phosphoribosyl synthetase-associated domain DKE50_015550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKE50_015555 PF01386 Ribosomal L25p family DKE50_015580 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DKE50_015590 PF08543 Phosphomethylpyrimidine kinase DKE50_015590 PF03070 TENA/THI-4/PQQC family DKE50_015590 PF02581 Thiamine monophosphate synthase DKE50_015600 PF00550 Phosphopantetheine attachment site DKE50_015615 PF01783 Ribosomal L32p protein family DKE50_015620 PF02620 Large ribosomal RNA subunit accumulation protein YceD DKE50_015625 PF04315 Elongation factor P hydroxylase DKE50_015630 PF01300 Telomere recombination DKE50_015640 PF04079 Segregation and condensation complex subunit ScpB DKE50_015645 PF01479 S4 domain DKE50_015645 PF00849 RNA pseudouridylate synthase DKE50_015660 PF00155 Aminotransferase class I and II DKE50_015680 PF00982 Glycosyltransferase family 20 DKE50_015690 PF00210 Ferritin-like domain DKE50_015715 PF01925 Sulfite exporter TauE/SafE DKE50_015740 PF01207 Dihydrouridine synthase (Dus) DKE50_015775 PF00692 dUTPase DKE50_015845 PF00291 Pyridoxal-phosphate dependent enzyme DKE50_015875 PF00175 Oxidoreductase NAD-binding domain DKE50_015875 PF00970 Oxidoreductase FAD-binding domain DKE50_015880 PF03466 LysR substrate binding domain DKE50_015880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_015900 PF00361 Proton-conducting membrane transporter DKE50_015915 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE50_015920 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DKE50_015960 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DKE50_015980 PF00486 Transcriptional regulatory protein, C terminal DKE50_015980 PF00072 Response regulator receiver domain DKE50_016035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_016035 PF03466 LysR substrate binding domain DKE50_016070 PF02515 CoA-transferase family III DKE50_016090 PF00107 Zinc-binding dehydrogenase DKE50_016090 PF08240 Alcohol dehydrogenase GroES-like domain DKE50_016390 PF02445 Quinolinate synthetase A protein DKE50_016395 PF01960 ArgJ family DKE50_016445 PF00756 Putative esterase DKE50_016470 PF00293 NUDIX domain DKE50_016515 PF01634 ATP phosphoribosyltransferase DKE50_016530 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DKE50_016580 PF00795 Carbon-nitrogen hydrolase DKE50_016590 PF01047 MarR family DKE50_016595 PF02566 OsmC-like protein DKE50_016645 PF02541 Ppx/GppA phosphatase family DKE50_016650 PF00085 Thioredoxin DKE50_016665 PF00216 Bacterial DNA-binding protein DKE50_016700 PF01632 Ribosomal protein L35 DKE50_016715 PF02798 Glutathione S-transferase, N-terminal domain DKE50_016715 PF00043 Glutathione S-transferase, C-terminal domain DKE50_016720 PF05198 Translation initiation factor IF-3, N-terminal domain DKE50_016720 PF00707 Translation initiation factor IF-3, C-terminal domain DKE50_016740 PF00381 PTS HPr component phosphorylation site DKE50_016750 PF02569 Pantoate-beta-alanine ligase DKE50_016755 PF02548 Ketopantoate hydroxymethyltransferase DKE50_016785 PF02824 TGS domain DKE50_016785 PF04607 Region found in RelA / SpoT proteins DKE50_016785 PF13291 ACT domain DKE50_016830 PF00106 short chain dehydrogenase DKE50_016840 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DKE50_016890 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE50_016910 PF01022 Bacterial regulatory protein, arsR family DKE50_016915 PF03960 ArsC family DKE50_016920 PF13411 MerR HTH family regulatory protein DKE50_016935 PF07670 Nucleoside recognition DKE50_016935 PF02421 Ferrous iron transport protein B DKE50_016935 PF17910 FeoB cytosolic helical domain DKE50_016935 PF07664 Ferrous iron transport protein B C terminus DKE50_016985 PF00072 Response regulator receiver domain DKE50_016985 PF00486 Transcriptional regulatory protein, C terminal DKE50_017075 PF01207 Dihydrouridine synthase (Dus) DKE50_017085 PF03466 LysR substrate binding domain DKE50_017085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_017095 PF00899 ThiF family DKE50_017105 PF01026 TatD related DNase DKE50_017155 PF10369 Small subunit of acetolactate synthase DKE50_017170 PF00133 tRNA synthetases class I (I, L, M and V) DKE50_017170 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE50_017170 PF08264 Anticodon-binding domain of tRNA DKE50_017170 PF09334 tRNA synthetases class I (M) DKE50_017215 PF00929 Exonuclease DKE50_017230 PF00462 Glutaredoxin DKE50_017235 PF02556 Preprotein translocase subunit SecB DKE50_017250 PF13360 PQQ-like domain DKE50_017250 PF01011 PQQ enzyme repeat DKE50_017285 PF00334 Nucleoside diphosphate kinase DKE50_017290 PF04384 Iron-sulphur cluster assembly DKE50_017295 PF01569 PAP2 superfamily DKE50_017340 PF02447 GntP family permease DKE50_017360 PF00871 Acetokinase family DKE50_017420 PF00561 alpha/beta hydrolase fold DKE50_017420 PF07021 Methionine biosynthesis protein MetW DKE50_017440 PF02416 mttA/Hcf106 family DKE50_017445 PF02416 mttA/Hcf106 family DKE50_017490 PF00186 Dihydrofolate reductase DKE50_017505 PF01625 Peptide methionine sulfoxide reductase DKE50_017510 PF02472 Biopolymer transport protein ExbD/TolR DKE50_017540 PF00830 Ribosomal L28 family DKE50_017600 PF01638 HxlR-like helix-turn-helix DKE50_017605 PF00107 Zinc-binding dehydrogenase DKE50_017605 PF08240 Alcohol dehydrogenase GroES-like domain DKE50_017610 PF04102 SlyX DKE50_017670 PF01416 tRNA pseudouridine synthase DKE50_017680 PF01176 Translation initiation factor 1A / IF-1 DKE50_017695 PF00180 Isocitrate/isopropylmalate dehydrogenase DKE50_017705 PF00694 Aconitase C-terminal domain DKE50_017710 PF00330 Aconitase family (aconitate hydratase) DKE50_017720 PF03466 LysR substrate binding domain DKE50_017720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_017760 PF12706 Beta-lactamase superfamily domain DKE50_017765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE50_017765 PF03466 LysR substrate binding domain DKE50_017780 PF02798 Glutathione S-transferase, N-terminal domain DKE50_017785 PF08279 HTH domain DKE50_017785 PF13280 WYL domain DKE50_017850 PF02770 Acyl-CoA dehydrogenase, middle domain DKE50_017850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE50_017850 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DKE50_017860 PF03109 ABC1 family DKE50_017865 PF01197 Ribosomal protein L31 DKE50_017875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DKE50_017895 PF03884 DNA gyrase inhibitor YacG DKE50_017935 PF01206 Sulfurtransferase TusA DKE50_017940 PF00571 CBS domain DKE50_017940 PF03471 Transporter associated domain DKE50_017950 PF01588 Putative tRNA binding domain DKE50_017985 PF01430 Hsp33 protein DKE50_018005 PF01544 CorA-like Mg2+ transporter protein DKE50_018015 PF00312 Ribosomal protein S15 DKE50_018060 PF01209 ubiE/COQ5 methyltransferase family DKE50_018070 PF03109 ABC1 family DKE50_018080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE50_018105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE50_018110 PF00361 Proton-conducting membrane transporter DKE50_018120 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DKE50_018145 PF02576 RimP N-terminal domain DKE50_018145 PF17384 RimP C-terminal SH3 domain DKE50_018165 PF03840 Preprotein translocase SecG subunit DKE50_018185 PF01478 Type IV leader peptidase family DKE50_018185 PF06750 Bacterial Peptidase A24 N-terminal domain DKE50_018190 PF01121 Dephospho-CoA kinase DKE50_018200 PF08032 RNA 2'-O ribose methyltransferase substrate binding DKE50_018200 PF00588 SpoU rRNA Methylase family DKE50_018205 PF06865 Pyrimidine/purine nucleoside phosphorylase DKE50_018225 PF03652 Holliday junction resolvase DKE50_018240 PF04632 Fusaric acid resistance protein family DKE50_018255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKE50_018255 PF12833 Helix-turn-helix domain DKE50_018255 PF02805 Metal binding domain of Ada DKE50_018255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE50_018260 PF01066 CDP-alcohol phosphatidyltransferase DKE50_018305 PF00108 Thiolase, N-terminal domain DKE50_018305 PF02803 Thiolase, C-terminal domain DKE50_018320 PF00376 MerR family regulatory protein DKE50_018320 PF09278 MerR, DNA binding DKE50_018370 PF00561 alpha/beta hydrolase fold DKE50_018405 PF16320 Ribosomal protein L7/L12 dimerisation domain DKE50_018405 PF00542 Ribosomal protein L7/L12 C-terminal domain DKE50_018410 PF00466 Ribosomal protein L10 DKE50_018495 PF00816 H-NS histone family DKE50_018520 PF03900 Porphobilinogen deaminase, C-terminal domain DKE50_018520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DKE50_018525 PF04397 LytTr DNA-binding domain DKE50_018525 PF00072 Response regulator receiver domain DKE50_018540 PF04362 Bacterial Fe(2+) trafficking DKE50_018545 PF01895 PhoU domain DKE50_018555 PF00892 EamA-like transporter family DKE50_018585 PF01258 Prokaryotic dksA/traR C4-type zinc finger DKE50_018595 PF01098 Cell cycle protein DKE50_018620 PF00589 Phage integrase family DKE50_018620 PF02899 Phage integrase, N-terminal SAM-like domain DKE50_018630 PF01842 ACT domain DKE50_018630 PF00742 Homoserine dehydrogenase DKE50_018630 PF03447 Homoserine dehydrogenase, NAD binding domain DKE50_018635 PF00291 Pyridoxal-phosphate dependent enzyme DKE50_018640 PF00768 D-alanyl-D-alanine carboxypeptidase DKE50_018670 PF03739 Lipopolysaccharide export system permease LptF/LptG DKE50_018715 PF03477 ATP cone domain DKE50_018795 PF01022 Bacterial regulatory protein, arsR family DKE50_018805 PF09278 MerR, DNA binding DKE50_018805 PF00376 MerR family regulatory protein DKE50_018860 PF13335 Magnesium chelatase, subunit ChlI C-terminal DKE50_018860 PF01078 Magnesium chelatase, subunit ChlI DKE50_018870 PF00155 Aminotransferase class I and II DKE50_018870 PF00392 Bacterial regulatory proteins, gntR family DKE50_018875 PF00596 Class II Aldolase and Adducin N-terminal domain DKE50_018925 PF03458 UPF0126 domain DKE50_018930 PF02810 SEC-C motif DKE50_018940 PF03641 Possible lysine decarboxylase DKE50_018990 PF03358 NADPH-dependent FMN reductase DKE50_019040 PF00440 Bacterial regulatory proteins, tetR family DKE50_019065 PF01327 Polypeptide deformylase DKE50_019090 PF01300 Telomere recombination DKE50_019115 PF00255 Glutathione peroxidase DKE50_019135 PF00231 ATP synthase DKE50_019140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE50_019140 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKE50_019140 PF00306 ATP synthase alpha/beta chain, C terminal domain DKE50_019155 PF00137 ATP synthase subunit C DKE50_019230 PF05726 Pirin C-terminal cupin domain DKE50_019230 PF02678 Pirin DKE50_019240 PF01475 Ferric uptake regulator family DKE50_019245 PF03551 Transcriptional regulator PadR-like family DKE50_019250 PF13302 Acetyltransferase (GNAT) domain DKE50_019255 PF02540 NAD synthase DKE50_019255 PF00958 GMP synthase C terminal domain DKE50_019255 PF00117 Glutamine amidotransferase class-I DKE50_019260 PF04286 Protein of unknown function (DUF445) DKE50_019330 PF07120 Protein of unknown function (DUF1376) DKE50_019410 PF00381 PTS HPr component phosphorylation site DKE50_019410 PF02896 PEP-utilising enzyme, TIM barrel domain DKE50_019410 PF00391 PEP-utilising enzyme, mobile domain DKE50_019410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE50_019410 PF05524 PEP-utilising enzyme, N-terminal DKE50_019415 PF00381 PTS HPr component phosphorylation site DKE50_019415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE50_019455 PF00765 Autoinducer synthase DKE50_019460 PF07690 Major Facilitator Superfamily DKE50_019460 PF00083 Sugar (and other) transporter DKE50_019465 PF00378 Enoyl-CoA hydratase/isomerase DKE50_019470 PF00378 Enoyl-CoA hydratase/isomerase DKE50_019480 PF00501 AMP-binding enzyme DKE50_019480 PF13193 AMP-binding enzyme C-terminal domain DKE50_019485 PF13193 AMP-binding enzyme C-terminal domain DKE50_019485 PF00501 AMP-binding enzyme DKE50_019500 PF00171 Aldehyde dehydrogenase family DKE50_019515 PF00324 Amino acid permease DKE50_019520 PF01042 Endoribonuclease L-PSP DKE50_019525 PF01168 Alanine racemase, N-terminal domain DKE50_019525 PF00842 Alanine racemase, C-terminal domain DKE50_019530 PF01266 FAD dependent oxidoreductase DKE50_019535 PF01037 Lrp/AsnC ligand binding domain DKE50_019560 PF00849 RNA pseudouridylate synthase DKE50_019595 PF00285 Citrate synthase, C-terminal domain DKE50_019605 PF07729 FCD domain DKE50_019605 PF00392 Bacterial regulatory proteins, gntR family DKE50_019625 PF01070 FMN-dependent dehydrogenase DKE50_019630 PF07729 FCD domain DKE50_019630 PF00392 Bacterial regulatory proteins, gntR family DKE50_019660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DKE50_019660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DKE50_019660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DKE50_019675 PF00535 Glycosyl transferase family 2 DKE50_019720 PF05523 WxcM-like, C-terminal DKE50_019750 PF13807 G-rich domain on putative tyrosine kinase DKE50_019750 PF02706 Chain length determinant protein DKE50_019750 PF13614 AAA domain DKE50_019770 PF01510 N-acetylmuramoyl-L-alanine amidase DKE50_019790 PF01138 3' exoribonuclease family, domain 1 DKE50_019790 PF03725 3' exoribonuclease family, domain 2 DKE50_019795 PF00487 Fatty acid desaturase DKE50_019805 PF00440 Bacterial regulatory proteins, tetR family DKE50_019830 PF00106 short chain dehydrogenase DKE50_019860 PF00296 Luciferase-like monooxygenase DKE50_019865 PF00528 Binding-protein-dependent transport system inner membrane component DKE50_019880 PF01048 Phosphorylase superfamily DKE50_019900 PF01252 Signal peptidase (SPase) II DKE50_019945 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DKE50_019950 PF07859 alpha/beta hydrolase fold DKE50_019975 PF01025 GrpE DKE50_020000 PF13406 Transglycosylase SLT domain DKE50_020010 PF00731 AIR carboxylase DKE50_020020 PF08245 Mur ligase middle domain DKE50_020020 PF01225 Mur ligase family, catalytic domain DKE50_020020 PF02875 Mur ligase family, glutamate ligase domain DKE50_020030 PF00872 Transposase, Mutator family DKE50_020055 PF03738 Glutathionylspermidine synthase preATP-grasp DKE50_020070 PF00156 Phosphoribosyl transferase domain DKE50_020105 PF01809 Putative membrane protein insertion efficiency factor DKE50_020115 PF00468 Ribosomal protein L34 DKE50_020190 PF00085 Thioredoxin DKE50_020195 PF00999 Sodium/hydrogen exchanger family DKE50_020195 PF02254 TrkA-N domain DKE50_020195 PF02080 TrkA-C domain DKE50_020275 PF13614 AAA domain DKE50_020285 PF13737 Transposase DDE domain DKE50_020385 PF05973 Phage derived protein Gp49-like (DUF891) DKE50_020520 PF02583 Metal-sensitive transcriptional repressor DKE50_020545 PF00465 Iron-containing alcohol dehydrogenase DKE50_020565 PF16925 Tetracyclin repressor-like, C-terminal domain DKE50_020565 PF00440 Bacterial regulatory proteins, tetR family DKE50_020635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKE50_020635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKE50_020635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKE50_020635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKE50_020650 PF13610 DDE domain DKE50_020695 PF07015 VirC1 protein DKE50_020890 PF01381 Helix-turn-helix DKE50_021005 PF02416 mttA/Hcf106 family DKE50_021095 PF13610 DDE domain DKE50_021155 PF13610 DDE domain DKE50_021215 PF05973 Phage derived protein Gp49-like (DUF891) DKE50_021220 PF01381 Helix-turn-helix DKE50_021415 PF01726 LexA DNA binding domain DKE50_021415 PF00717 Peptidase S24-like DKE50_021515 PF13610 DDE domain DKE50_021520 PF02796 Helix-turn-helix domain of resolvase DKE50_021520 PF00239 Resolvase, N terminal domain DKE50_021550 PF05101 Type IV secretory pathway, VirB3-like protein DKE50_021555 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DKE50_021560 PF07996 Type IV secretion system proteins DKE50_021580 PF04335 VirB8 protein DKE50_021595 PF03743 Bacterial conjugation TrbI-like protein DKE50_021600 PF00437 Type II/IV secretion system protein DKE50_021660 PF00816 H-NS histone family DKE50_021670 PF01751 Toprim domain DKE50_021670 PF01131 DNA topoisomerase DKE50_021720 PF01443 Viral (Superfamily 1) RNA helicase DKE50_021720 PF03389 MobA/MobL family DKE50_021720 PF17841 BID domain of Bartonella effector protein (Bep) DKE50_021740 PF18272 single-stranded DNA binding TraI N-terminal subdomain DKE50_021740 PF07057 DNA helicase TraI DKE50_021740 PF18340 DNA relaxase TraI 2B/2B-like domain DKE50_021740 PF08751 TrwC relaxase DKE50_021745 PF18340 DNA relaxase TraI 2B/2B-like domain DKE50_021745 PF07057 DNA helicase TraI DKE50_021745 PF18272 single-stranded DNA binding TraI N-terminal subdomain DKE50_021745 PF08751 TrwC relaxase