locus-tag class description DKE44_000010 IPR001001 DNA polymerase III, beta sliding clamp DKE44_000010 IPR022637 DNA polymerase III, beta sliding clamp, central DKE44_000010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal DKE44_000010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal DKE44_000020 IPR002288 DNA gyrase B subunit, C-terminal DKE44_000020 IPR011557 DNA gyrase, subunit B DKE44_000020 IPR003594 Histidine kinase/HSP90-like ATPase DKE44_000020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE44_000020 IPR020568 Ribosomal protein S5 domain 2-type fold DKE44_000020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKE44_000020 IPR041423 DNA gyrase subunit B insert domain DKE44_000020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DKE44_000020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DKE44_000020 IPR018522 DNA topoisomerase, type IIA, conserved site DKE44_000020 IPR006171 TOPRIM domain DKE44_000020 IPR034160 DNA gyrase subunit B, TOPRIM domain DKE44_000020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DKE44_000020 IPR001241 DNA topoisomerase, type IIA DKE44_000055 IPR023063 FeS cluster insertion protein ErpA DKE44_000055 IPR000361 FeS cluster biogenesis DKE44_000055 IPR016092 FeS cluster insertion protein DKE44_000055 IPR035903 HesB-like domain superfamily DKE44_000055 IPR017870 FeS cluster insertion, C-terminal, conserved site DKE44_000135 IPR005793 Formyl transferase, C-terminal DKE44_000135 IPR036477 Formyl transferase, N-terminal domain superfamily DKE44_000135 IPR011034 Formyl transferase-like, C-terminal domain superfamily DKE44_000135 IPR002376 Formyl transferase, N-terminal DKE44_000135 IPR037022 Formyl transferase, C-terminal domain superfamily DKE44_000135 IPR005794 Methionyl-tRNA formyltransferase DKE44_000135 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain DKE44_000160 IPR006042 Xanthine/uracil permease DKE44_000160 IPR006043 Xanthine/uracil/vitamin C permease DKE44_000160 IPR019918 Pyrimidine permease RutG, predicted DKE44_000210 IPR036259 MFS transporter superfamily DKE44_000210 IPR020846 Major facilitator superfamily domain DKE44_000210 IPR011701 Major facilitator superfamily DKE44_000215 IPR036812 NADP-dependent oxidoreductase domain superfamily DKE44_000215 IPR023210 NADP-dependent oxidoreductase domain DKE44_000215 IPR018170 Aldo/keto reductase, conserved site DKE44_000215 IPR020471 Aldo/keto reductase DKE44_000220 IPR036390 Winged helix DNA-binding domain superfamily DKE44_000220 IPR000847 Transcription regulator HTH, LysR DKE44_000220 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_000220 IPR005119 LysR, substrate-binding DKE44_000235 IPR036390 Winged helix DNA-binding domain superfamily DKE44_000235 IPR000524 Transcription regulator HTH, GntR DKE44_000235 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_000235 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_000235 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_000235 IPR004839 Aminotransferase, class I/classII DKE44_000235 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_000245 IPR004597 DNA-3-methyladenine glycosylase I DKE44_000245 IPR011257 DNA glycosylase DKE44_000245 IPR005019 Methyladenine glycosylase DKE44_000280 IPR008228 Uncharacterised conserved protein UCP006173 DKE44_000280 IPR005358 Putative zinc- or iron-chelating domain containing protein DKE44_000305 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase DKE44_000305 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase DKE44_000305 IPR028923 SAICAR synthetase/ADE2, N-terminal DKE44_000305 IPR018236 SAICAR synthetase, conserved site DKE44_000320 IPR000868 Isochorismatase-like DKE44_000320 IPR036380 Isochorismatase-like superfamily DKE44_000335 IPR007553 Domain of unknown function DUF523 DKE44_000375 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_000375 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DKE44_000375 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DKE44_000390 IPR010282 Uncharacterised protein family HutD/Ves DKE44_000390 IPR011051 RmlC-like cupin domain superfamily DKE44_000390 IPR014710 RmlC-like jelly roll fold DKE44_000395 IPR025161 Putative transposase IS4/IS5 family DKE44_000405 IPR001106 Aromatic amino acid lyase DKE44_000405 IPR008948 L-Aspartase-like DKE44_000405 IPR024083 Fumarase/histidase, N-terminal DKE44_000405 IPR005921 Histidine ammonia-lyase DKE44_000405 IPR022313 Phenylalanine/histidine ammonia-lyases, active site DKE44_000410 IPR004840 Amino acid permease, conserved site DKE44_000410 IPR004841 Amino acid permease/ SLC12A domain DKE44_000430 IPR023214 HAD superfamily DKE44_000430 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DKE44_000430 IPR036412 HAD-like superfamily DKE44_000430 IPR006439 HAD hydrolase, subfamily IA DKE44_000430 IPR041492 Haloacid dehalogenase-like hydrolase DKE44_000435 IPR015942 Asp/Glu/hydantoin racemase DKE44_000435 IPR018187 Asp/Glu racemase, active site 1 DKE44_000435 IPR033134 Asp/Glu racemase, active site 2 DKE44_000435 IPR004391 Glutamate racemase DKE44_000435 IPR001920 Asp/Glu racemase DKE44_000475 IPR001387 Cro/C1-type helix-turn-helix domain DKE44_000475 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DKE44_000550 IPR006283 Thiamine-monophosphate kinase DKE44_000550 IPR036921 PurM-like, N-terminal domain superfamily DKE44_000550 IPR036676 PurM-like, C-terminal domain superfamily DKE44_000550 IPR016188 PurM-like, N-terminal domain DKE44_000550 IPR010918 PurM-like, C-terminal domain DKE44_000555 IPR006027 NusB/RsmB/TIM44 DKE44_000555 IPR011605 NusB antitermination factor DKE44_000555 IPR035926 NusB-like superfamily DKE44_000560 IPR002180 Lumazine/riboflavin synthase DKE44_000560 IPR036467 Lumazine/riboflavin synthase superfamily DKE44_000560 IPR034964 Lumazine synthase DKE44_000600 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DKE44_000600 IPR003732 D-aminoacyl-tRNA deacylase DTD DKE44_000605 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase DKE44_000605 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain DKE44_000605 IPR006406 Nicotinate phosphoribosyltransferase DKE44_000605 IPR007229 Nicotinate phosphoribosyltransferase family DKE44_000605 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DKE44_000610 IPR036873 Rhodanese-like domain superfamily DKE44_000610 IPR001763 Rhodanese-like domain DKE44_000610 IPR001307 Thiosulphate sulfurtransferase, conserved site DKE44_000685 IPR003752 Disulphide bond formation protein DsbB/BdbC DKE44_000685 IPR022920 Disulphide bond formation protein DsbB DKE44_000685 IPR023380 DsbB-like superfamily DKE44_000760 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DKE44_000760 IPR029058 Alpha/Beta hydrolase fold DKE44_000775 IPR008979 Galactose-binding-like domain superfamily DKE44_000775 IPR005164 Allantoicase DKE44_000775 IPR015908 Allantoicase domain DKE44_000790 IPR006042 Xanthine/uracil permease DKE44_000790 IPR006043 Xanthine/uracil/vitamin C permease DKE44_000790 IPR017588 Uric acid permease UacT-like DKE44_000795 IPR023419 Transthyretin, conserved site DKE44_000795 IPR014306 Hydroxyisourate hydrolase DKE44_000795 IPR023416 Transthyretin/hydroxyisourate hydrolase domain DKE44_000795 IPR023418 Transthyretin, thyroxine binding site DKE44_000795 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily DKE44_000850 IPR036249 Thioredoxin-like superfamily DKE44_000850 IPR006504 Transcriptional regulator Spx/MgsR DKE44_000850 IPR006660 Arsenate reductase-like DKE44_000855 IPR004808 AP endonuclease 1 DKE44_000855 IPR020847 AP endonuclease 1, binding site DKE44_000855 IPR005135 Endonuclease/exonuclease/phosphatase DKE44_000855 IPR020848 AP endonuclease 1, conserved site DKE44_000855 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DKE44_000890 IPR005758 UDP-N-acetylmuramate--L-alanine ligase DKE44_000890 IPR000713 Mur ligase, N-terminal catalytic domain DKE44_000890 IPR036615 Mur ligase, C-terminal domain superfamily DKE44_000890 IPR004101 Mur ligase, C-terminal DKE44_000890 IPR036565 Mur-like, catalytic domain superfamily DKE44_000890 IPR013221 Mur ligase, central DKE44_000895 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DKE44_000895 IPR011761 ATP-grasp fold DKE44_000895 IPR005905 D-alanine--D-alanine ligase DKE44_000895 IPR016185 Pre-ATP-grasp domain superfamily DKE44_000895 IPR011095 D-alanine--D-alanine ligase, C-terminal DKE44_000895 IPR013815 ATP-grasp fold, subdomain 1 DKE44_000895 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DKE44_000910 IPR000158 Cell division protein FtsZ DKE44_000910 IPR008280 Tubulin/FtsZ, C-terminal DKE44_000910 IPR003008 Tubulin/FtsZ, GTPase domain DKE44_000910 IPR036525 Tubulin/FtsZ, GTPase domain superfamily DKE44_000910 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain DKE44_000910 IPR024757 Cell division protein FtsZ, C-terminal DKE44_000910 IPR020805 Cell division protein FtsZ, conserved site DKE44_000935 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DKE44_000935 IPR004167 Peripheral subunit-binding domain DKE44_000935 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DKE44_000935 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DKE44_000935 IPR036625 E3-binding domain superfamily DKE44_000935 IPR000089 Biotin/lipoyl attachment DKE44_000935 IPR011053 Single hybrid motif DKE44_000935 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex DKE44_000945 IPR001727 Gdt1 family DKE44_000955 IPR005358 Putative zinc- or iron-chelating domain containing protein DKE44_000970 IPR000659 Pyridoxamine 5'-phosphate oxidase DKE44_000970 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site DKE44_000970 IPR012349 FMN-binding split barrel DKE44_000970 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal DKE44_000970 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative DKE44_000995 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DKE44_000995 IPR013785 Aldolase-type TIM barrel DKE44_001020 IPR042099 AMP-dependent synthetase-like superfamily DKE44_001020 IPR011904 Acetate-CoA ligase DKE44_001020 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain DKE44_001020 IPR000873 AMP-dependent synthetase/ligase DKE44_001020 IPR020845 AMP-binding, conserved site DKE44_001020 IPR025110 AMP-binding enzyme, C-terminal domain DKE44_001030 IPR036390 Winged helix DNA-binding domain superfamily DKE44_001030 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_001030 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE44_001030 IPR019888 Transcription regulator AsnC-type DKE44_001030 IPR011008 Dimeric alpha-beta barrel DKE44_001030 IPR000485 AsnC-type HTH domain DKE44_001060 IPR007436 Protein of unknown function DUF485 DKE44_001095 IPR009057 Homeobox-like domain superfamily DKE44_001095 IPR001647 DNA-binding HTH domain, TetR-type DKE44_001095 IPR011075 Tetracyclin repressor-like, C-terminal domain DKE44_001095 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE44_001125 IPR016084 Haem oxygenase-like, multi-helical DKE44_001125 IPR004305 Thiaminase-2/PQQC DKE44_001125 IPR027574 Thiaminase II DKE44_001175 IPR016160 Aldehyde dehydrogenase, cysteine active site DKE44_001175 IPR015590 Aldehyde dehydrogenase domain DKE44_001175 IPR016163 Aldehyde dehydrogenase, C-terminal DKE44_001175 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DKE44_001175 IPR016162 Aldehyde dehydrogenase, N-terminal DKE44_001175 IPR016161 Aldehyde/histidinol dehydrogenase DKE44_001175 IPR010102 Succinate semialdehyde dehydrogenase DKE44_001185 IPR000868 Isochorismatase-like DKE44_001185 IPR036380 Isochorismatase-like superfamily DKE44_001190 IPR003829 Pirin, N-terminal domain DKE44_001190 IPR011051 RmlC-like cupin domain superfamily DKE44_001190 IPR014710 RmlC-like jelly roll fold DKE44_001190 IPR008778 Pirin, C-terminal domain DKE44_001190 IPR012093 Pirin DKE44_001255 IPR000847 Transcription regulator HTH, LysR DKE44_001255 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain DKE44_001255 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_001255 IPR036390 Winged helix DNA-binding domain superfamily DKE44_001255 IPR005119 LysR, substrate-binding DKE44_001320 IPR002577 Helix-turn-helix, HxlR type DKE44_001320 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_001320 IPR036390 Winged helix DNA-binding domain superfamily DKE44_001320 IPR011991 ArsR-like helix-turn-helix domain DKE44_001325 IPR029039 Flavoprotein-like superfamily DKE44_001325 IPR003680 Flavodoxin-like fold DKE44_001420 IPR041527 YhcG, N-terminal DKE44_001420 IPR009362 YhcG PDDEXK nuclease domain DKE44_001490 IPR000425 Major intrinsic protein DKE44_001490 IPR023271 Aquaporin-like DKE44_001490 IPR023743 Aquaporin Z DKE44_001490 IPR022357 Major intrinsic protein, conserved site DKE44_001490 IPR034294 Aquaporin transporter DKE44_001505 IPR011060 Ribulose-phosphate binding barrel DKE44_001505 IPR004651 Histidine biosynthesis, HisF DKE44_001505 IPR013785 Aldolase-type TIM barrel DKE44_001505 IPR006062 Histidine biosynthesis DKE44_001510 IPR002575 Aminoglycoside phosphotransferase DKE44_001510 IPR011009 Protein kinase-like domain superfamily DKE44_001510 IPR005280 Homoserine kinase, type II DKE44_001545 IPR011060 Ribulose-phosphate binding barrel DKE44_001545 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA DKE44_001545 IPR006062 Histidine biosynthesis DKE44_001545 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase DKE44_001545 IPR013785 Aldolase-type TIM barrel DKE44_001560 IPR029062 Class I glutamine amidotransferase-like DKE44_001560 IPR017926 Glutamine amidotransferase DKE44_001560 IPR010139 Imidazole glycerol phosphate synthase, subunit H DKE44_001585 IPR017255 Acetyltransferase, GNAT, predicted DKE44_001585 IPR016181 Acyl-CoA N-acyltransferase DKE44_001585 IPR000182 GNAT domain DKE44_001585 IPR023072 Acetyltransferase, YpeA DKE44_001605 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_001605 IPR001867 OmpR/PhoB-type DNA-binding domain DKE44_001605 IPR039420 Transcriptional regulatory protein WalR-like DKE44_001605 IPR011006 CheY-like superfamily DKE44_001605 IPR016032 Signal transduction response regulator, C-terminal effector DKE44_001605 IPR001789 Signal transduction response regulator, receiver domain DKE44_001625 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_001625 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_001625 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme DKE44_001625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_001625 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase DKE44_001750 IPR036615 Mur ligase, C-terminal domain superfamily DKE44_001750 IPR004101 Mur ligase, C-terminal DKE44_001750 IPR000713 Mur ligase, N-terminal catalytic domain DKE44_001750 IPR035911 MurE/MurF, N-terminal DKE44_001750 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase DKE44_001750 IPR036565 Mur-like, catalytic domain superfamily DKE44_001750 IPR013221 Mur ligase, central DKE44_001755 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site DKE44_001755 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase DKE44_001755 IPR000715 Glycosyl transferase, family 4 DKE44_001820 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 DKE44_001820 IPR023753 FAD/NAD(P)-binding domain DKE44_001820 IPR009051 Alpha-helical ferredoxin DKE44_001820 IPR028261 Dihydroprymidine dehydrogenase domain II DKE44_001820 IPR036188 FAD/NAD(P)-binding domain superfamily DKE44_001830 IPR007156 LemA DKE44_001830 IPR023353 LemA-like domain superfamily DKE44_001850 IPR000983 Bacterial general secretion pathway protein G-type pilin DKE44_001850 IPR012902 Prokaryotic N-terminal methylation site DKE44_001850 IPR001082 Fimbrial protein pilin DKE44_001860 IPR031726 Protein glycosylation ligase domain DKE44_001860 IPR021797 Virulence factor membrane-bound polymerase, C-terminal DKE44_001860 IPR007016 O-antigen ligase-related DKE44_001870 IPR007419 BFD-like [2Fe-2S]-binding domain DKE44_001870 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DKE44_001875 IPR019897 RidA, conserved site DKE44_001875 IPR035959 RutC-like superfamily DKE44_001875 IPR006056 RidA family DKE44_001875 IPR006175 YjgF/YER057c/UK114 family DKE44_001880 IPR012676 TGS-like DKE44_001880 IPR004095 TGS DKE44_001880 IPR007685 RelA/SpoT DKE44_001880 IPR004811 RelA/SpoT family DKE44_001880 IPR012675 Beta-grasp domain superfamily DKE44_001880 IPR002912 ACT domain DKE44_001880 IPR033655 RelA, TGS domain DKE44_001880 IPR003607 HD/PDEase domain DKE44_001885 IPR003716 DNA-directed RNA polymerase, omega subunit DKE44_001885 IPR036161 RPB6/omega subunit-like superfamily DKE44_001885 IPR012293 RNA polymerase subunit, RPB6/omega DKE44_001885 IPR006110 RNA polymerase, subunit omega/K/RPB6 DKE44_001890 IPR020590 Guanylate kinase, conserved site DKE44_001890 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DKE44_001890 IPR008144 Guanylate kinase-like domain DKE44_001890 IPR017665 Guanylate kinase DKE44_001890 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_001930 IPR012902 Prokaryotic N-terminal methylation site DKE44_001930 IPR001082 Fimbrial protein pilin DKE44_001930 IPR000983 Bacterial general secretion pathway protein G-type pilin DKE44_001940 IPR027275 PRC-barrel domain DKE44_001940 IPR011033 PRC-barrel-like superfamily DKE44_001940 IPR036976 RimM, N-terminal domain superfamily DKE44_001940 IPR009000 Translation protein, beta-barrel domain superfamily DKE44_001940 IPR002676 RimM, N-terminal DKE44_001940 IPR011961 16S rRNA processing protein RimM DKE44_001945 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain DKE44_001945 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKE44_001945 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal DKE44_001945 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria DKE44_001945 IPR029028 Alpha/beta knot methyltransferases DKE44_001950 IPR008991 Translation protein SH3-like domain superfamily DKE44_001950 IPR018257 Ribosomal protein L19, conserved site DKE44_001950 IPR001857 Ribosomal protein L19 DKE44_001950 IPR038657 Ribosomal protein L19 superfamily DKE44_001955 IPR000073 Alpha/beta hydrolase fold-1 DKE44_001955 IPR029058 Alpha/Beta hydrolase fold DKE44_001960 IPR004961 Lipase chaperone DKE44_001980 IPR000620 EamA domain DKE44_001990 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DKE44_001990 IPR036291 NAD(P)-binding domain superfamily DKE44_001990 IPR002912 ACT domain DKE44_001990 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DKE44_001990 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DKE44_001990 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKE44_002015 IPR003680 Flavodoxin-like fold DKE44_002015 IPR029039 Flavoprotein-like superfamily DKE44_002030 IPR010019 Integral membrane protein, YccS DKE44_002030 IPR032692 Integral membrane protein YccS, N-terminal DKE44_002030 IPR010020 Integral membrane protein, YccS/YhfK DKE44_002035 IPR010019 Integral membrane protein, YccS DKE44_002035 IPR032692 Integral membrane protein YccS, N-terminal DKE44_002035 IPR010020 Integral membrane protein, YccS/YhfK DKE44_002040 IPR018152 Superoxide dismutase, copper/zinc, binding site DKE44_002040 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily DKE44_002040 IPR001424 Superoxide dismutase, copper/zinc binding domain DKE44_002040 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone DKE44_002095 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_002095 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_002095 IPR005814 Aminotransferase class-III DKE44_002095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_002095 IPR004636 Acetylornithine/Succinylornithine transaminase family DKE44_002095 IPR026330 Succinylornithine transaminase DKE44_002095 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria DKE44_002110 IPR007079 Succinylarginine dihydrolase DKE44_002110 IPR037031 Succinylarginine dihydrolase superfamily DKE44_002145 IPR005119 LysR, substrate-binding DKE44_002145 IPR000847 Transcription regulator HTH, LysR DKE44_002145 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_002145 IPR036390 Winged helix DNA-binding domain superfamily DKE44_002165 IPR002310 Glycine-tRNA ligase, alpha subunit DKE44_002165 IPR006194 Glycine-tRNA synthetase, heterodimeric DKE44_002215 IPR041121 SDH, C-terminal DKE44_002215 IPR011342 Shikimate dehydrogenase DKE44_002215 IPR036291 NAD(P)-binding domain superfamily DKE44_002215 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DKE44_002215 IPR022893 Shikimate dehydrogenase family DKE44_002215 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal DKE44_002225 IPR032677 GTP cyclohydrolase II DKE44_002225 IPR000926 GTP cyclohydrolase II, RibA DKE44_002225 IPR036144 RibA-like superfamily DKE44_002235 IPR020550 Inositol monophosphatase, conserved site DKE44_002235 IPR000760 Inositol monophosphatase-like DKE44_002235 IPR022337 Inositol monophosphatase, SuhB DKE44_002235 IPR033942 Inositol monophosphatase DKE44_002235 IPR020583 Inositol monophosphatase, metal-binding site DKE44_002250 IPR030802 ABC transporter permease MalE DKE44_002250 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DKE44_002260 IPR042245 Tgt2/MlaC superfamily DKE44_002260 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DKE44_002270 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB DKE44_002270 IPR004488 Magnesium/cobalt transport protein CorA DKE44_002275 IPR031100 LOG family DKE44_002275 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DKE44_002280 IPR000086 NUDIX hydrolase domain DKE44_002280 IPR020476 NUDIX hydrolase DKE44_002280 IPR015797 NUDIX hydrolase-like domain superfamily DKE44_002280 IPR020084 NUDIX hydrolase, conserved site DKE44_002305 IPR002123 Phospholipid/glycerol acyltransferase DKE44_002305 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase DKE44_002305 IPR041728 GPAT/DHAPAT, acyltransferase domain DKE44_002305 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB DKE44_002310 IPR003703 Acyl-CoA thioesterase DKE44_002310 IPR029069 HotDog domain superfamily DKE44_002330 IPR030489 Transcription regulator Rrf2-type, conserved site DKE44_002330 IPR000944 Transcription regulator Rrf2-type DKE44_002330 IPR023761 Transcriptional repressor HTH, NsrR DKE44_002330 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_002330 IPR036390 Winged helix DNA-binding domain superfamily DKE44_002350 IPR029062 Class I glutamine amidotransferase-like DKE44_002350 IPR017926 Glutamine amidotransferase DKE44_002355 IPR027486 Ribosomal protein S10 domain DKE44_002355 IPR036838 Ribosomal protein S10 domain superfamily DKE44_002355 IPR018268 Ribosomal protein S10, conserved site DKE44_002355 IPR001848 Ribosomal protein S10 DKE44_002375 IPR012340 Nucleic acid-binding, OB-fold DKE44_002375 IPR005880 Ribosomal protein L2, bacterial/organellar-type DKE44_002375 IPR022669 Ribosomal protein L2, C-terminal DKE44_002375 IPR014726 Ribosomal protein L2, domain 3 DKE44_002375 IPR008991 Translation protein SH3-like domain superfamily DKE44_002375 IPR002171 Ribosomal protein L2 DKE44_002375 IPR014722 Ribosomal protein L2, domain 2 DKE44_002375 IPR022666 Ribosomal Proteins L2, RNA binding domain DKE44_002380 IPR002222 Ribosomal protein S19/S15 DKE44_002380 IPR005732 Ribosomal protein S19, bacterial-type DKE44_002380 IPR023575 Ribosomal protein S19, superfamily DKE44_002380 IPR020934 Ribosomal protein S19 conserved site DKE44_002385 IPR018260 Ribosomal protein L22/L17, conserved site DKE44_002385 IPR036394 Ribosomal protein L22/L17 superfamily DKE44_002385 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type DKE44_002385 IPR001063 Ribosomal protein L22/L17 DKE44_002395 IPR016180 Ribosomal protein L10e/L16 DKE44_002395 IPR000114 Ribosomal protein L16 DKE44_002395 IPR020798 Ribosomal protein L16, conserved site DKE44_002395 IPR036920 Ribosomal protein L10e/L16 superfamily DKE44_002400 IPR001854 Ribosomal protein L29/L35 DKE44_002400 IPR036049 Ribosomal protein L29/L35 superfamily DKE44_002405 IPR019984 30S ribosomal protein S17 DKE44_002405 IPR019979 Ribosomal protein S17, conserved site DKE44_002405 IPR012340 Nucleic acid-binding, OB-fold DKE44_002405 IPR000266 Ribosomal protein S17/S11 DKE44_002415 IPR005825 Ribosomal protein L24/L26, conserved site DKE44_002415 IPR003256 Ribosomal protein L24 DKE44_002415 IPR008991 Translation protein SH3-like domain superfamily DKE44_002415 IPR041988 Ribosomal Protein L26/L24, KOW domain DKE44_002415 IPR005824 KOW DKE44_002415 IPR014722 Ribosomal protein L2, domain 2 DKE44_002420 IPR031309 Ribosomal protein L5, C-terminal DKE44_002420 IPR020930 Ribosomal protein L5, bacterial-type DKE44_002420 IPR031310 Ribosomal protein L5, N-terminal DKE44_002420 IPR022803 Ribosomal protein L5 domain superfamily DKE44_002420 IPR002132 Ribosomal protein L5 DKE44_002420 IPR020929 Ribosomal protein L5, conserved site DKE44_002425 IPR001209 Ribosomal protein S14 DKE44_002425 IPR018271 Ribosomal protein S14, conserved site DKE44_002425 IPR023036 Ribosomal protein S14, bacterial/plastid DKE44_002430 IPR000630 Ribosomal protein S8 DKE44_002430 IPR035987 Ribosomal protein S8 superfamily DKE44_002435 IPR002358 Ribosomal protein L6, conserved site DKE44_002435 IPR020040 Ribosomal protein L6, alpha-beta domain DKE44_002435 IPR000702 Ribosomal protein L6 DKE44_002435 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily DKE44_002435 IPR019906 Ribosomal protein L6, bacterial-type DKE44_002440 IPR005484 Ribosomal protein L18 DKE44_002440 IPR004389 Ribosomal protein L18, bacterial-type DKE44_002445 IPR000851 Ribosomal protein S5 DKE44_002445 IPR018192 Ribosomal protein S5, N-terminal, conserved site DKE44_002445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKE44_002445 IPR020568 Ribosomal protein S5 domain 2-type fold DKE44_002445 IPR013810 Ribosomal protein S5, N-terminal DKE44_002445 IPR005712 Ribosomal protein S5, bacterial-type DKE44_002445 IPR005324 Ribosomal protein S5, C-terminal DKE44_002450 IPR005996 Ribosomal protein L30, bacterial-type DKE44_002450 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DKE44_002450 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DKE44_002455 IPR036227 Ribosomal L18e/L15P superfamily DKE44_002455 IPR005749 Ribosomal protein L15, bacterial-type DKE44_002455 IPR021131 Ribosomal protein L18e/L15P DKE44_002455 IPR001196 Ribosomal protein L15, conserved site DKE44_002455 IPR030878 Ribosomal protein L15 DKE44_002465 IPR035977 Ribosomal protein L36 superfamily DKE44_002465 IPR000473 Ribosomal protein L36 DKE44_002470 IPR018269 Ribosomal protein S13, conserved site DKE44_002470 IPR019980 Ribosomal protein S13, bacterial-type DKE44_002470 IPR010979 Ribosomal protein S13-like, H2TH DKE44_002470 IPR001892 Ribosomal protein S13 DKE44_002470 IPR027437 30s ribosomal protein S13, C-terminal DKE44_002475 IPR001971 Ribosomal protein S11 DKE44_002475 IPR036967 Ribosomal protein S11 superfamily DKE44_002475 IPR019981 Ribosomal protein S11, bacterial-type DKE44_002475 IPR018102 Ribosomal S11, conserved site DKE44_002480 IPR036986 RNA-binding S4 domain superfamily DKE44_002480 IPR001912 Ribosomal protein S4/S9, N-terminal DKE44_002480 IPR005709 Ribosomal protein S4, bacterial-type DKE44_002480 IPR018079 Ribosomal protein S4, conserved site DKE44_002480 IPR022801 Ribosomal protein S4/S9 DKE44_002480 IPR002942 RNA-binding S4 domain DKE44_002485 IPR036643 DNA-directed RNA polymerase, insert domain superfamily DKE44_002485 IPR011260 RNA polymerase, alpha subunit, C-terminal DKE44_002485 IPR036603 RNA polymerase, RBP11-like subunit DKE44_002485 IPR011773 DNA-directed RNA polymerase, alpha subunit DKE44_002485 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type DKE44_002485 IPR011262 DNA-directed RNA polymerase, insert domain DKE44_002490 IPR036373 Ribosomal protein L17 superfamily DKE44_002490 IPR000456 Ribosomal protein L17 DKE44_002510 IPR036714 Flavinator of succinate dehydrogenase superfamily DKE44_002510 IPR005631 Flavinator of succinate dehydrogenase DKE44_002540 IPR012658 Conserved hypothetical protein CHP02443 DKE44_002545 IPR001567 Peptidase M3A/M3B catalytic domain DKE44_002545 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DKE44_002595 IPR011234 Fumarylacetoacetase-like, C-terminal DKE44_002595 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily DKE44_002600 IPR011051 RmlC-like cupin domain superfamily DKE44_002600 IPR018060 DNA binding HTH domain, AraC-type DKE44_002600 IPR018062 HTH domain AraC-type, conserved site DKE44_002600 IPR009057 Homeobox-like domain superfamily DKE44_002615 IPR008254 Flavodoxin/nitric oxide synthase DKE44_002615 IPR001226 Flavodoxin, conserved site DKE44_002615 IPR029039 Flavoprotein-like superfamily DKE44_002615 IPR010089 Flavoprotein WrbA-like DKE44_002615 IPR005025 NADPH-dependent FMN reductase-like DKE44_002620 IPR029057 Phosphoribosyltransferase-like DKE44_002620 IPR000836 Phosphoribosyltransferase domain DKE44_002620 IPR010079 Xanthine phosphoribosyltransferase DKE44_002640 IPR023091 Metalloprotease catalytic domain superfamily, predicted DKE44_002640 IPR020549 Endoribonuclease YbeY, conserved site DKE44_002640 IPR002036 Endoribonuclease YbeY DKE44_002645 IPR003714 PhoH-like protein DKE44_002645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_002655 IPR011055 Duplicated hybrid motif DKE44_002655 IPR023346 Lysozyme-like domain superfamily DKE44_002655 IPR016047 Peptidase M23 DKE44_002655 IPR010090 Phage tail tape measure protein DKE44_002655 IPR000189 Prokaryotic transglycosylase, active site DKE44_002655 IPR008258 Transglycosylase SLT domain 1 DKE44_002665 IPR036291 NAD(P)-binding domain superfamily DKE44_002665 IPR022383 Lactate/malate dehydrogenase, C-terminal DKE44_002665 IPR001236 Lactate/malate dehydrogenase, N-terminal DKE44_002665 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal DKE44_002665 IPR010945 Malate dehydrogenase, type 2 DKE44_002665 IPR001557 L-lactate/malate dehydrogenase DKE44_002690 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase DKE44_002690 IPR000462 CDP-alcohol phosphatidyltransferase DKE44_002770 IPR005481 Biotin carboxylase-like, N-terminal domain DKE44_002770 IPR011761 ATP-grasp fold DKE44_002770 IPR011054 Rudiment single hybrid motif DKE44_002770 IPR016185 Pre-ATP-grasp domain superfamily DKE44_002770 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DKE44_002770 IPR011053 Single hybrid motif DKE44_002770 IPR005482 Biotin carboxylase, C-terminal DKE44_002770 IPR011764 Biotin carboxylation domain DKE44_002770 IPR001882 Biotin-binding site DKE44_002770 IPR000089 Biotin/lipoyl attachment DKE44_002800 IPR036760 SspB-like superfamily DKE44_002800 IPR007481 Stringent starvation protein B DKE44_002810 IPR020568 Ribosomal protein S5 domain 2-type fold DKE44_002810 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKE44_002810 IPR000754 Ribosomal protein S9 DKE44_002810 IPR023035 Ribosomal protein S9, bacterial/plastid DKE44_002810 IPR020574 Ribosomal protein S9, conserved site DKE44_002820 IPR005255 PdxA family DKE44_002820 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase DKE44_002825 IPR011530 Ribosomal RNA adenine dimethylase DKE44_002825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE44_002825 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal DKE44_002825 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site DKE44_002825 IPR023165 rRNA adenine dimethylase-like DKE44_002825 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DKE44_002870 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DKE44_002870 IPR006664 Outer membrane protein, bacterial DKE44_002870 IPR002368 Outer membrane protein, OmpA DKE44_002870 IPR006665 OmpA-like domain DKE44_002870 IPR006690 Outer membrane protein, OmpA-like, conserved site DKE44_002870 IPR036737 OmpA-like domain superfamily DKE44_002870 IPR000498 Outer membrane protein OmpA-like, transmembrane domain DKE44_002990 IPR021134 Bestrophin/UPF0187 DKE44_002995 IPR001405 Uncharacterised protein family UPF0758 DKE44_002995 IPR010994 RuvA domain 2-like DKE44_002995 IPR025657 RadC-like JAB domain DKE44_002995 IPR037518 MPN domain DKE44_003000 IPR003382 Flavoprotein DKE44_003000 IPR036551 Flavin prenyltransferase-like DKE44_003000 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal DKE44_003000 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC DKE44_003000 IPR035929 CoaB-like superfamily DKE44_003005 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DKE44_003005 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DKE44_003005 IPR005665 Protein-export membrane protein SecF, bacterial DKE44_003005 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DKE44_003015 IPR003849 Preprotein translocase YajC DKE44_003050 IPR036641 HPT domain superfamily DKE44_003050 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DKE44_003050 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKE44_003050 IPR005467 Histidine kinase domain DKE44_003050 IPR001789 Signal transduction response regulator, receiver domain DKE44_003050 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DKE44_003050 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DKE44_003050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE44_003050 IPR003594 Histidine kinase/HSP90-like ATPase DKE44_003050 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DKE44_003050 IPR011006 CheY-like superfamily DKE44_003060 IPR018300 Aminotransferase, class IV, conserved site DKE44_003060 IPR005785 Branched-chain amino acid aminotransferase I DKE44_003060 IPR036038 Aminotransferase-like, PLP-dependent enzymes DKE44_003060 IPR033939 Branched-chain aminotransferase DKE44_003060 IPR001544 Aminotransferase class IV DKE44_003080 IPR002509 NodB homology domain DKE44_003080 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DKE44_003130 IPR006195 Aminoacyl-tRNA synthetase, class II DKE44_003130 IPR004524 Aspartate-tRNA ligase, type 1 DKE44_003130 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DKE44_003130 IPR012340 Nucleic acid-binding, OB-fold DKE44_003130 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DKE44_003130 IPR004115 GAD-like domain superfamily DKE44_003130 IPR029351 GAD domain DKE44_003130 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DKE44_003165 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE44_003165 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE44_003165 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE44_003165 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE44_003165 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DKE44_003165 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE44_003165 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE44_003185 IPR011006 CheY-like superfamily DKE44_003185 IPR001867 OmpR/PhoB-type DNA-binding domain DKE44_003185 IPR016032 Signal transduction response regulator, C-terminal effector DKE44_003185 IPR001789 Signal transduction response regulator, receiver domain DKE44_003185 IPR039420 Transcriptional regulatory protein WalR-like DKE44_003185 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_003225 IPR023026 Tryptophan synthase beta chain/beta chain-like DKE44_003225 IPR006654 Tryptophan synthase, beta chain DKE44_003225 IPR006653 Tryptophan synthase, beta chain, conserved site DKE44_003225 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DKE44_003225 IPR001926 Pyridoxal-phosphate dependent enzyme DKE44_003260 IPR034733 Acetyl-CoA carboxylase DKE44_003260 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal DKE44_003260 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit DKE44_003260 IPR029045 ClpP/crotonase-like domain superfamily DKE44_003265 IPR036615 Mur ligase, C-terminal domain superfamily DKE44_003265 IPR004101 Mur ligase, C-terminal DKE44_003265 IPR036565 Mur-like, catalytic domain superfamily DKE44_003265 IPR013221 Mur ligase, central DKE44_003265 IPR001645 Folylpolyglutamate synthetase DKE44_003265 IPR018109 Folylpolyglutamate synthetase, conserved site DKE44_003340 IPR003313 AraC-type arabinose-binding/dimerisation domain DKE44_003340 IPR009057 Homeobox-like domain superfamily DKE44_003340 IPR037923 Transcription regulator HTH-like DKE44_003340 IPR018060 DNA binding HTH domain, AraC-type DKE44_003340 IPR020449 Transcription regulator HTH, AraC- type DKE44_003340 IPR018062 HTH domain AraC-type, conserved site DKE44_003370 IPR000390 Small multidrug resistance protein family DKE44_003380 IPR020615 Thiolase, acyl-enzyme intermediate active site DKE44_003380 IPR016039 Thiolase-like DKE44_003380 IPR002155 Thiolase DKE44_003380 IPR020616 Thiolase, N-terminal DKE44_003380 IPR020613 Thiolase, conserved site DKE44_003380 IPR020617 Thiolase, C-terminal DKE44_003380 IPR020610 Thiolase, active site DKE44_003420 IPR001185 Large-conductance mechanosensitive channel DKE44_003420 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DKE44_003420 IPR036019 Gated mechanosensitive channel DKE44_003420 IPR019823 Large-conductance mechanosensitive channel, conserved site DKE44_003440 IPR011034 Formyl transferase-like, C-terminal domain superfamily DKE44_003440 IPR003180 Methylpurine-DNA glycosylase DKE44_003440 IPR036995 Methylpurine-DNA glycosylase superfamily DKE44_003450 IPR023663 NADPH dehydrogenase DKE44_003450 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DKE44_003450 IPR013785 Aldolase-type TIM barrel DKE44_003480 IPR017703 YgfZ/GcvT conserved site DKE44_003480 IPR028896 Aminomethyltransferase-like DKE44_003480 IPR006222 Aminomethyltransferase, folate-binding domain DKE44_003480 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DKE44_003490 IPR007438 Protein of unknown function DUF488 DKE44_003530 IPR011006 CheY-like superfamily DKE44_003530 IPR001789 Signal transduction response regulator, receiver domain DKE44_003535 IPR002545 CheW-like domain DKE44_003535 IPR039315 Chemotaxis protein CheW DKE44_003535 IPR036061 CheW-like domain superfamily DKE44_003540 IPR029095 NarX-like, N-terminal DKE44_003540 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE44_003540 IPR003660 HAMP domain DKE44_003540 IPR004090 Chemotaxis methyl-accepting receptor DKE44_003565 IPR002933 Peptidase M20 DKE44_003565 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria DKE44_003565 IPR036264 Bacterial exopeptidase dimerisation domain DKE44_003565 IPR011650 Peptidase M20, dimerisation domain DKE44_003580 IPR007401 Protein of unknown function DUF454 DKE44_003675 IPR005789 Threonine dehydratase, catabolic DKE44_003675 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DKE44_003675 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DKE44_003675 IPR001926 Pyridoxal-phosphate dependent enzyme DKE44_003675 IPR002912 ACT domain DKE44_003705 IPR018027 Asn/Gln amidotransferase DKE44_003705 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic DKE44_003705 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E DKE44_003705 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit DKE44_003705 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 DKE44_003705 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like DKE44_003705 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 DKE44_003705 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site DKE44_003705 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DKE44_003715 IPR003837 Glu-tRNAGln amidotransferase C subunit DKE44_003715 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C DKE44_003725 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 DKE44_003725 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 DKE44_003725 IPR007221 Rod shape-determining protein MreC DKE44_003730 IPR007227 Cell shape-determining protein MreD DKE44_003730 IPR026034 Cell shape-determining protein MreD, proteobacterial type DKE44_003735 IPR029001 Inosine triphosphate pyrophosphatase-like DKE44_003735 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DKE44_003750 IPR014292 Acyltransferase, WS/DGAT/MGAT DKE44_003750 IPR009721 O-acyltransferase WSD1, C-terminal DKE44_003750 IPR004255 O-acyltransferase, WSD1, N-terminal DKE44_003755 IPR002500 Phosphoadenosine phosphosulphate reductase DKE44_003755 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase DKE44_003755 IPR011798 Adenosine 5'-phosphosulphate reductase DKE44_003755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_003780 IPR020449 Transcription regulator HTH, AraC- type DKE44_003780 IPR018062 HTH domain AraC-type, conserved site DKE44_003780 IPR018060 DNA binding HTH domain, AraC-type DKE44_003780 IPR003313 AraC-type arabinose-binding/dimerisation domain DKE44_003780 IPR037923 Transcription regulator HTH-like DKE44_003780 IPR009057 Homeobox-like domain superfamily DKE44_003795 IPR003824 Undecaprenyl-diphosphatase UppP DKE44_003835 IPR015376 Zinc ribbon, NADH pyrophosphatase DKE44_003835 IPR000086 NUDIX hydrolase domain DKE44_003835 IPR022925 NADH pyrophosphatase NudC DKE44_003835 IPR015797 NUDIX hydrolase-like domain superfamily DKE44_003860 IPR001107 Band 7 domain DKE44_003860 IPR036013 Band 7/SPFH domain superfamily DKE44_003860 IPR018080 Band 7/stomatin-like, conserved site DKE44_003860 IPR001972 Stomatin family DKE44_003895 IPR011006 CheY-like superfamily DKE44_003895 IPR001867 OmpR/PhoB-type DNA-binding domain DKE44_003895 IPR001789 Signal transduction response regulator, receiver domain DKE44_003895 IPR039420 Transcriptional regulatory protein WalR-like DKE44_003895 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_003910 IPR029020 Ammonium/urea transporter DKE44_003910 IPR001905 Ammonium transporter DKE44_003910 IPR018047 Ammonium transporter, conserved site DKE44_003910 IPR024041 Ammonium transporter AmtB-like domain DKE44_003950 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_003950 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_003950 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DKE44_003950 IPR036291 NAD(P)-binding domain superfamily DKE44_003960 IPR035439 UPF0145 domain superfamily DKE44_003960 IPR002765 Uncharacterised protein family UPF0145 DKE44_003965 IPR002765 Uncharacterised protein family UPF0145 DKE44_003965 IPR035439 UPF0145 domain superfamily DKE44_003970 IPR003423 Outer membrane efflux protein DKE44_003970 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DKE44_003980 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DKE44_003980 IPR006143 RND efflux pump, membrane fusion protein DKE44_003985 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DKE44_003985 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DKE44_003995 IPR008949 Isoprenoid synthase domain superfamily DKE44_003995 IPR000092 Polyprenyl synthetase DKE44_003995 IPR033749 Polyprenyl synthetase, conserved site DKE44_004005 IPR018258 Ribosomal protein L21, conserved site DKE44_004005 IPR001787 Ribosomal protein L21 DKE44_004005 IPR028909 Ribosomal protein L21-like DKE44_004005 IPR036164 L21-like superfamily DKE44_004010 IPR018261 Ribosomal protein L27, conserved site DKE44_004010 IPR001684 Ribosomal protein L27 DKE44_004025 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DKE44_004025 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DKE44_004025 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily DKE44_004025 IPR015866 Serine-tRNA synthetase, type1, N-terminal DKE44_004025 IPR002317 Serine-tRNA ligase, type1 DKE44_004025 IPR033729 Serine-tRNA ligase catalytic core domain DKE44_004025 IPR006195 Aminoacyl-tRNA synthetase, class II DKE44_004035 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase DKE44_004035 IPR001537 tRNA/rRNA methyltransferase, SpoU type DKE44_004035 IPR029028 Alpha/beta knot methyltransferases DKE44_004035 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKE44_004065 IPR000544 Octanoyltransferase DKE44_004065 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DKE44_004065 IPR020605 Octanoyltransferase, conserved site DKE44_004070 IPR027471 YbeD-like domain superfamily DKE44_004070 IPR007454 Uncharacterised protein family UPF0250 DKE44_004105 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit DKE44_004105 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit DKE44_004105 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site DKE44_004105 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit DKE44_004120 IPR009051 Alpha-helical ferredoxin DKE44_004120 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DKE44_004120 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DKE44_004120 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal DKE44_004120 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein DKE44_004120 IPR036010 2Fe-2S ferredoxin-like superfamily DKE44_004120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DKE44_004120 IPR012675 Beta-grasp domain superfamily DKE44_004150 IPR016102 Succinyl-CoA synthetase-like DKE44_004150 IPR005809 Succinate--CoA synthetase, beta subunit DKE44_004150 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site DKE44_004150 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DKE44_004150 IPR013815 ATP-grasp fold, subdomain 1 DKE44_004150 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type DKE44_004150 IPR011761 ATP-grasp fold DKE44_004160 IPR002305 Aminoacyl-tRNA synthetase, class Ic DKE44_004160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_004160 IPR002306 Tryptophan-tRNA ligase DKE44_004160 IPR024109 Tryptophan-tRNA ligase, bacterial-type DKE44_004160 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE44_004240 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DKE44_004240 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DKE44_004240 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_004250 IPR006016 UspA DKE44_004250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_004250 IPR006015 Universal stress protein A family DKE44_004260 IPR038743 YjgH-like DKE44_004260 IPR035959 RutC-like superfamily DKE44_004260 IPR006175 YjgF/YER057c/UK114 family DKE44_004295 IPR017924 RNA-binding protein YhbY DKE44_004295 IPR001890 RNA-binding, CRM domain DKE44_004295 IPR035920 YhbY-like superfamily DKE44_004300 IPR015507 Ribosomal RNA large subunit methyltransferase E DKE44_004300 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DKE44_004300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE44_004305 IPR003593 AAA+ ATPase domain DKE44_004305 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_004305 IPR003959 ATPase, AAA-type, core DKE44_004305 IPR003960 ATPase, AAA-type, conserved site DKE44_004305 IPR005936 Peptidase, FtsH DKE44_004305 IPR011546 Peptidase M41, FtsH extracellular DKE44_004305 IPR000642 Peptidase M41 DKE44_004305 IPR037219 Peptidase M41-like DKE44_004305 IPR041569 AAA ATPase, AAA+ lid domain DKE44_004350 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DKE44_004350 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site DKE44_004350 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DKE44_004350 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase DKE44_004350 IPR036291 NAD(P)-binding domain superfamily DKE44_004355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE44_004355 IPR004498 Ribosomal protein L11 methyltransferase DKE44_004395 IPR018369 Chaperonin GroES, conserved site DKE44_004395 IPR020818 GroES chaperonin family DKE44_004395 IPR037124 GroES chaperonin superfamily DKE44_004395 IPR011032 GroES-like superfamily DKE44_004495 IPR036259 MFS transporter superfamily DKE44_004495 IPR011701 Major facilitator superfamily DKE44_004495 IPR020846 Major facilitator superfamily domain DKE44_004510 IPR014047 Chromate transporter, long chain DKE44_004510 IPR003370 Chromate transporter DKE44_004515 IPR018634 Chromate resistance exported protein DKE44_004535 IPR000829 DAGK family DKE44_004535 IPR033718 Diacylglycerol kinase, prokaryotic DKE44_004535 IPR036945 Diacylglycerol kinase (DAGK) superfamily DKE44_004545 IPR030395 Glycerophosphodiester phosphodiesterase domain DKE44_004545 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily DKE44_004560 IPR001915 Peptidase M48 DKE44_004560 IPR022919 Peptidase M48, protease HtpX, putative DKE44_004565 IPR008258 Transglycosylase SLT domain 1 DKE44_004565 IPR023346 Lysozyme-like domain superfamily DKE44_004565 IPR000189 Prokaryotic transglycosylase, active site DKE44_004605 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DKE44_004605 IPR020845 AMP-binding, conserved site DKE44_004605 IPR000873 AMP-dependent synthetase/ligase DKE44_004605 IPR001031 Thioesterase DKE44_004605 IPR042099 AMP-dependent synthetase-like superfamily DKE44_004605 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DKE44_004605 IPR001242 Condensation domain DKE44_004605 IPR009081 Phosphopantetheine binding ACP domain DKE44_004605 IPR020802 Polyketide synthase, thioesterase domain DKE44_004605 IPR036736 ACP-like superfamily DKE44_004605 IPR029058 Alpha/Beta hydrolase fold DKE44_004605 IPR025110 AMP-binding enzyme, C-terminal domain DKE44_004605 IPR010071 Amino acid adenylation domain DKE44_004615 IPR018654 Putative toxin of bacterial toxin-antitoxin pair DKE44_004710 IPR000119 Histone-like DNA-binding protein DKE44_004710 IPR020816 Histone-like DNA-binding protein, conserved site DKE44_004710 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DKE44_004765 IPR016193 Cytidine deaminase-like DKE44_004765 IPR003786 Sulfur carrier protein FdhD DKE44_004770 IPR010652 Domain of unknown function DUF1232 DKE44_004800 IPR004841 Amino acid permease/ SLC12A domain DKE44_004800 IPR004840 Amino acid permease, conserved site DKE44_004815 IPR001653 Diaminopimelate epimerase, DapF DKE44_004815 IPR018510 Diaminopimelate epimerase, active site DKE44_004825 IPR001123 Amino acid exporter protein, LeuE-type DKE44_004825 IPR004778 Homoserine/Threonine efflux protein DKE44_004850 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain DKE44_004850 IPR001279 Metallo-beta-lactamase DKE44_004850 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE44_004850 IPR017782 Hydroxyacylglutathione hydrolase DKE44_004850 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain DKE44_004875 IPR001584 Integrase, catalytic core DKE44_004875 IPR012337 Ribonuclease H-like superfamily DKE44_004875 IPR036397 Ribonuclease H superfamily DKE44_004875 IPR009057 Homeobox-like domain superfamily DKE44_004920 IPR003791 Protein of unknown function UPF0178 DKE44_004935 IPR017871 ABC transporter, conserved site DKE44_004935 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_004935 IPR015854 ABC transporter, lipoprotein release, LolD DKE44_004935 IPR003439 ABC transporter-like DKE44_004935 IPR003593 AAA+ ATPase domain DKE44_004960 IPR002376 Formyl transferase, N-terminal DKE44_004960 IPR004607 Phosphoribosylglycinamide formyltransferase DKE44_004960 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DKE44_004960 IPR036477 Formyl transferase, N-terminal domain superfamily DKE44_004965 IPR036676 PurM-like, C-terminal domain superfamily DKE44_004965 IPR010918 PurM-like, C-terminal domain DKE44_004965 IPR016188 PurM-like, N-terminal domain DKE44_004965 IPR036921 PurM-like, N-terminal domain superfamily DKE44_004965 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase DKE44_004975 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_004975 IPR018312 Chromosomal replication control, initiator DnaA, conserved site DKE44_004975 IPR020591 Chromosomal replication control, initiator DnaA-like DKE44_004975 IPR001957 Chromosomal replication control, initiator DnaA DKE44_004975 IPR003593 AAA+ ATPase domain DKE44_004975 IPR013317 Chromosomal replication initiator protein DnaA DKE44_004975 IPR013159 Chromosomal replication initiator, DnaA C-terminal DKE44_004975 IPR024633 DnaA N-terminal domain DKE44_004975 IPR038454 DnaA, N-terminal domain superfamily DKE44_004975 IPR010921 Trp repressor/replication initiator DKE44_005010 IPR028343 Fructose-1,6-bisphosphatase DKE44_005010 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal DKE44_005010 IPR000146 Fructose-1,6-bisphosphatase class 1 DKE44_005035 IPR003400 Biopolymer transport protein ExbD/TolR DKE44_005035 IPR014168 Tol-Pal system protein TolR DKE44_005055 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_005055 IPR003593 AAA+ ATPase domain DKE44_005055 IPR041445 RuvB, AAA lid domain DKE44_005055 IPR008824 RuvB-like P-loop domain DKE44_005055 IPR004605 DNA helicase, Holliday junction RuvB-type DKE44_005055 IPR036390 Winged helix DNA-binding domain superfamily DKE44_005055 IPR008823 RuvB C-terminal winged helix domain DKE44_005055 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_005060 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial DKE44_005060 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DKE44_005060 IPR012340 Nucleic acid-binding, OB-fold DKE44_005060 IPR000085 Bacterial DNA recombination protein RuvA DKE44_005060 IPR036267 RuvA, C-terminal domain superfamily DKE44_005060 IPR011114 Holliday junction DNA helicase RuvA, C-terminal DKE44_005060 IPR010994 RuvA domain 2-like DKE44_005095 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria DKE44_005095 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DKE44_005095 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DKE44_005095 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DKE44_005100 IPR001753 Enoyl-CoA hydratase/isomerase DKE44_005100 IPR014748 Enoyl-CoA hydratase, C-terminal DKE44_005100 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB DKE44_005100 IPR029045 ClpP/crotonase-like domain superfamily DKE44_005105 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_005105 IPR004821 Cytidyltransferase-like domain DKE44_005105 IPR041750 Bifunctional NMN adenylyltransferase/Nudix hydrolase, N-terminal NMNAT domain DKE44_005105 IPR000086 NUDIX hydrolase domain DKE44_005105 IPR020084 NUDIX hydrolase, conserved site DKE44_005105 IPR015797 NUDIX hydrolase-like domain superfamily DKE44_005140 IPR013785 Aldolase-type TIM barrel DKE44_005140 IPR007197 Radical SAM DKE44_005140 IPR024924 7-carboxy-7-deazaguanine synthase-like DKE44_005195 IPR018094 Thymidylate kinase DKE44_005195 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_005195 IPR039430 Thymidylate kinase-like domain DKE44_005210 IPR001940 Peptidase S1C DKE44_005210 IPR009003 Peptidase S1, PA clan DKE44_005210 IPR011782 Peptidase S1C, Do DKE44_005210 IPR036034 PDZ superfamily DKE44_005210 IPR001478 PDZ domain DKE44_005260 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ DKE44_005260 IPR036130 Pyridoxine 5'-phosphate synthase DKE44_005260 IPR013785 Aldolase-type TIM barrel DKE44_005335 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site DKE44_005335 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain DKE44_005335 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain DKE44_005335 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I DKE44_005335 IPR036291 NAD(P)-binding domain superfamily DKE44_005335 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family DKE44_005355 IPR011529 Glutamate 5-kinase DKE44_005355 IPR036974 PUA domain superfamily DKE44_005355 IPR019797 Glutamate 5-kinase, conserved site DKE44_005355 IPR036393 Acetylglutamate kinase-like superfamily DKE44_005355 IPR002478 PUA domain DKE44_005355 IPR015947 PUA-like superfamily DKE44_005355 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase DKE44_005355 IPR001057 Glutamate/acetylglutamate kinase DKE44_005355 IPR041739 Glutamate-5-kinase domain DKE44_005355 IPR001048 Aspartate/glutamate/uridylate kinase DKE44_005370 IPR018517 tRNA-dihydrouridine synthase, conserved site DKE44_005370 IPR001269 tRNA-dihydrouridine synthase DKE44_005370 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 DKE44_005370 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal DKE44_005370 IPR032887 tRNA-dihydrouridine synthase B DKE44_005370 IPR035587 DUS-like, FMN-binding domain DKE44_005370 IPR013785 Aldolase-type TIM barrel DKE44_005420 IPR025161 Putative transposase IS4/IS5 family DKE44_005435 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DKE44_005445 IPR012338 Beta-lactamase/transpeptidase-like DKE44_005445 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DKE44_005445 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DKE44_005445 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DKE44_005445 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DKE44_005445 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DKE44_005460 IPR006145 Pseudouridine synthase, RsuA/RluA DKE44_005460 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DKE44_005460 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DKE44_005460 IPR020103 Pseudouridine synthase, catalytic domain superfamily DKE44_005460 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DKE44_005490 IPR036259 MFS transporter superfamily DKE44_005490 IPR010645 Uncharacterised MFS-type transporter YbfB DKE44_005535 IPR013785 Aldolase-type TIM barrel DKE44_005535 IPR036206 Thiamin phosphate synthase superfamily DKE44_005535 IPR034291 Thiamine phosphate synthase DKE44_005535 IPR022998 Thiamine phosphate synthase/TenI DKE44_005540 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase DKE44_005540 IPR005814 Aminotransferase class-III DKE44_005540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_005540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_005540 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_005595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_005595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_005595 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_005595 IPR004637 2,4-diaminobutyrate 4-transaminase DKE44_005595 IPR005814 Aminotransferase class-III DKE44_005605 IPR015590 Aldehyde dehydrogenase domain DKE44_005605 IPR016162 Aldehyde dehydrogenase, N-terminal DKE44_005605 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DKE44_005605 IPR016160 Aldehyde dehydrogenase, cysteine active site DKE44_005605 IPR016163 Aldehyde dehydrogenase, C-terminal DKE44_005605 IPR016161 Aldehyde/histidinol dehydrogenase DKE44_005625 IPR024370 PBP domain DKE44_005625 IPR011862 Phosphate binding protein DKE44_005640 IPR005670 Phosphate transport system permease protein 1 DKE44_005640 IPR015850 ABC transporter, phosphate import, PstB DKE44_005640 IPR003593 AAA+ ATPase domain DKE44_005640 IPR017871 ABC transporter, conserved site DKE44_005640 IPR003439 ABC transporter-like DKE44_005640 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_005670 IPR013539 Adenylosuccinate lyase PurB, C-terminal DKE44_005670 IPR022761 Fumarate lyase, N-terminal DKE44_005670 IPR000362 Fumarate lyase family DKE44_005670 IPR020557 Fumarate lyase, conserved site DKE44_005670 IPR024083 Fumarase/histidase, N-terminal DKE44_005670 IPR008948 L-Aspartase-like DKE44_005670 IPR004769 Adenylosuccinate lyase DKE44_005675 IPR035932 HflD-like superfamily DKE44_005675 IPR007451 High frequency lysogenization protein HflD DKE44_005695 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DKE44_005695 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DKE44_005695 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DKE44_005695 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DKE44_005695 IPR012338 Beta-lactamase/transpeptidase-like DKE44_005695 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DKE44_005735 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DKE44_005735 IPR004361 Glyoxalase I DKE44_005735 IPR037523 Vicinal oxygen chelate (VOC) domain DKE44_005735 IPR018146 Glyoxalase I, conserved site DKE44_005735 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DKE44_005745 IPR027491 Ribosomal protein L31 type A DKE44_005745 IPR042105 Ribosomal protein L31 superfamily DKE44_005745 IPR034704 L28p-like DKE44_005745 IPR002150 Ribosomal protein L31 DKE44_005765 IPR015365 Elongation factor P, C-terminal DKE44_005765 IPR012340 Nucleic acid-binding, OB-fold DKE44_005765 IPR014722 Ribosomal protein L2, domain 2 DKE44_005765 IPR013185 Translation elongation factor, KOW-like DKE44_005765 IPR001059 Translation elongation factor P/YeiP, central DKE44_005765 IPR011768 Translation elongation factor P DKE44_005765 IPR008991 Translation protein SH3-like domain superfamily DKE44_005765 IPR020599 Translation elongation factor P/YeiP DKE44_005770 IPR025299 CstA, C-terminal domain DKE44_005770 IPR003706 CstA, N-terminal domain DKE44_005825 IPR009057 Homeobox-like domain superfamily DKE44_005825 IPR005412 DNA-binding protein Fis DKE44_005825 IPR002197 DNA binding HTH domain, Fis-type DKE44_005840 IPR001387 Cro/C1-type helix-turn-helix domain DKE44_005840 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DKE44_005840 IPR031856 Putative bacterial antitoxin YdaS DKE44_006105 IPR000847 Transcription regulator HTH, LysR DKE44_006105 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_006105 IPR036390 Winged helix DNA-binding domain superfamily DKE44_006105 IPR005119 LysR, substrate-binding DKE44_006115 IPR035906 MetI-like superfamily DKE44_006115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_006115 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DKE44_006115 IPR030199 Histidine transport system permease protein HisQ DKE44_006120 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DKE44_006120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_006120 IPR035906 MetI-like superfamily DKE44_006130 IPR000390 Small multidrug resistance protein family DKE44_006135 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DKE44_006135 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DKE44_006150 IPR003719 Phenazine biosynthesis PhzF protein DKE44_006155 IPR033892 Ferredoxin--NADP reductase, bacteria DKE44_006155 IPR017938 Riboflavin synthase-like beta-barrel DKE44_006155 IPR001433 Oxidoreductase FAD/NAD(P)-binding DKE44_006155 IPR017927 FAD-binding domain, ferredoxin reductase-type DKE44_006155 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DKE44_006155 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DKE44_006155 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DKE44_006175 IPR016052 Bacteriophage 933W, L0136 DKE44_006175 IPR005220 Bacterial OB-fold DKE44_006175 IPR036700 Bacterial OB-fold superfamily DKE44_006205 IPR012338 Beta-lactamase/transpeptidase-like DKE44_006205 IPR001264 Glycosyl transferase, family 51 DKE44_006205 IPR023346 Lysozyme-like domain superfamily DKE44_006205 IPR028166 Bifunctional transglycosylase second domain DKE44_006205 IPR001460 Penicillin-binding protein, transpeptidase DKE44_006205 IPR036950 Penicillin binding protein transglycosylase domain DKE44_006205 IPR011813 Penicillin-binding protein 1B DKE44_006210 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal DKE44_006210 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal DKE44_006210 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DKE44_006210 IPR002504 NAD kinase DKE44_006215 IPR009749 Protein of unknown function DUF1315 DKE44_006235 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE44_006235 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE44_006235 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE44_006235 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE44_006235 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE44_006235 IPR006089 Acyl-CoA dehydrogenase, conserved site DKE44_006235 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE44_006285 IPR005583 Peroxide stress protein YaaA DKE44_006300 IPR006696 Protein of unknown function DUF423 DKE44_006315 IPR002059 Cold-shock protein, DNA-binding DKE44_006315 IPR019844 Cold-shock (CSD) domain DKE44_006315 IPR011129 Cold shock domain DKE44_006315 IPR012156 Cold shock, CspA DKE44_006315 IPR012340 Nucleic acid-binding, OB-fold DKE44_006335 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DKE44_006335 IPR036291 NAD(P)-binding domain superfamily DKE44_006335 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal DKE44_006335 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal DKE44_006335 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent DKE44_006335 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DKE44_006390 IPR042184 YqeY/Aim41, N-terminal domain DKE44_006390 IPR019004 Uncharacterised protein YqeY/Aim41 DKE44_006390 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 DKE44_006390 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like DKE44_006505 IPR042080 RNA 2'-phosphotransferase, N-terminal domain DKE44_006505 IPR022928 RNA 2'-phosphotransferase KptA, putative DKE44_006505 IPR042081 RNA 2'-phosphotransferase, C-terminal domain DKE44_006505 IPR002745 Phosphotransferase KptA/Tpt1 DKE44_006540 IPR038965 Transposase InsF-like DKE44_006540 IPR036397 Ribonuclease H superfamily DKE44_006540 IPR012337 Ribonuclease H-like superfamily DKE44_006540 IPR025948 HTH-like domain DKE44_006540 IPR001584 Integrase, catalytic core DKE44_006640 IPR036291 NAD(P)-binding domain superfamily DKE44_006640 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_006640 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_006705 IPR029058 Alpha/Beta hydrolase fold DKE44_006705 IPR022742 Serine aminopeptidase, S33 DKE44_006825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DKE44_006825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DKE44_006825 IPR005467 Histidine kinase domain DKE44_006825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE44_006825 IPR003594 Histidine kinase/HSP90-like ATPase DKE44_006825 IPR013727 Two-component sensor kinase, N-terminal DKE44_006825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DKE44_006830 IPR001789 Signal transduction response regulator, receiver domain DKE44_006830 IPR001867 OmpR/PhoB-type DNA-binding domain DKE44_006830 IPR011006 CheY-like superfamily DKE44_006830 IPR039420 Transcriptional regulatory protein WalR-like DKE44_006830 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_006845 IPR000620 EamA domain DKE44_006850 IPR011042 Six-bladed beta-propeller, TolB-like DKE44_006850 IPR012938 Glucose/Sorbosone dehydrogenase DKE44_006850 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase DKE44_006885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_006885 IPR035906 MetI-like superfamily DKE44_006890 IPR026253 Methionine import ATP-binding protein MetN DKE44_006890 IPR003593 AAA+ ATPase domain DKE44_006890 IPR003439 ABC transporter-like DKE44_006890 IPR017871 ABC transporter, conserved site DKE44_006890 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_006890 IPR018449 NIL domain DKE44_006890 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain DKE44_006890 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal DKE44_006905 IPR036397 Ribonuclease H superfamily DKE44_006905 IPR012337 Ribonuclease H-like superfamily DKE44_006905 IPR001584 Integrase, catalytic core DKE44_006905 IPR025948 HTH-like domain DKE44_006925 IPR002197 DNA binding HTH domain, Fis-type DKE44_006925 IPR005412 DNA-binding protein Fis DKE44_006925 IPR009057 Homeobox-like domain superfamily DKE44_006945 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related DKE44_006945 IPR020595 MnmG-related, conserved site DKE44_006945 IPR036188 FAD/NAD(P)-binding domain superfamily DKE44_006945 IPR026904 GidA associated domain 3 DKE44_006945 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG DKE44_006990 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DKE44_006990 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DKE44_006990 IPR020070 Ribosomal protein L9, N-terminal DKE44_006990 IPR036935 Ribosomal protein L9, N-terminal domain superfamily DKE44_006990 IPR020594 Ribosomal protein L9, bacteria/chloroplast DKE44_006990 IPR000244 Ribosomal protein L9 DKE44_006990 IPR020069 Ribosomal protein L9, C-terminal DKE44_006995 IPR018275 Ribosomal protein S18, conserved site DKE44_006995 IPR036870 Ribosomal protein S18 superfamily DKE44_006995 IPR001648 Ribosomal protein S18 DKE44_007010 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes DKE44_007010 IPR014210 Cytochrome o ubiquinol oxidase subunit IV DKE44_007040 IPR026530 Phosphoenolpyruvate synthase regulatory protein DKE44_007040 IPR005177 Bifunctional kinase-pyrophosphorylase DKE44_007075 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD DKE44_007105 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_007105 IPR000847 Transcription regulator HTH, LysR DKE44_007105 IPR005119 LysR, substrate-binding DKE44_007105 IPR036390 Winged helix DNA-binding domain superfamily DKE44_007115 IPR004373 Peptide chain release factor 1 DKE44_007115 IPR000352 Peptide chain release factor class I DKE44_007115 IPR005139 Peptide chain release factor DKE44_007120 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DKE44_007120 IPR025714 Methyltransferase domain DKE44_007120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE44_007120 IPR004556 Methyltransferase HemK-like DKE44_007120 IPR040758 Release factor glutamine methyltransferase, N-terminal domain DKE44_007120 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific DKE44_007140 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_007140 IPR036291 NAD(P)-binding domain superfamily DKE44_007140 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_007145 IPR006089 Acyl-CoA dehydrogenase, conserved site DKE44_007145 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE44_007145 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE44_007145 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE44_007145 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE44_007145 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE44_007145 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE44_007150 IPR020845 AMP-binding, conserved site DKE44_007150 IPR000873 AMP-dependent synthetase/ligase DKE44_007150 IPR042099 AMP-dependent synthetase-like superfamily DKE44_007150 IPR025110 AMP-binding enzyme, C-terminal domain DKE44_007160 IPR000594 THIF-type NAD/FAD binding fold DKE44_007160 IPR012730 Molybdopterin synthase sulfurylase MoeB DKE44_007160 IPR035985 Ubiquitin-activating enzyme DKE44_007165 IPR000719 Protein kinase domain DKE44_007165 IPR011009 Protein kinase-like domain superfamily DKE44_007165 IPR004147 UbiB domain DKE44_007190 IPR003820 Potassium-transporting ATPase C chain DKE44_007200 IPR001789 Signal transduction response regulator, receiver domain DKE44_007200 IPR011006 CheY-like superfamily DKE44_007200 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_007200 IPR001867 OmpR/PhoB-type DNA-binding domain DKE44_007200 IPR039420 Transcriptional regulatory protein WalR-like DKE44_007215 IPR009078 Ferritin-like superfamily DKE44_007215 IPR011566 Ubiquinone biosynthesis protein Coq7 DKE44_007265 IPR020846 Major facilitator superfamily domain DKE44_007265 IPR011701 Major facilitator superfamily DKE44_007265 IPR036259 MFS transporter superfamily DKE44_007315 IPR013507 DNA mismatch repair protein, S5 domain 2-like DKE44_007315 IPR037198 MutL, C-terminal domain superfamily DKE44_007315 IPR014790 MutL, C-terminal, dimerisation DKE44_007315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE44_007315 IPR042121 MutL, C-terminal domain, regulatory subdomain DKE44_007315 IPR002099 DNA mismatch repair protein family, N-terminal DKE44_007315 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms DKE44_007315 IPR020667 DNA mismatch repair protein, MutL DKE44_007315 IPR042120 MutL, C-terminal domain, dimerisation subdomain DKE44_007315 IPR014762 DNA mismatch repair, conserved site DKE44_007315 IPR020568 Ribosomal protein S5 domain 2-type fold DKE44_007315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKE44_007325 IPR010920 LSM domain superfamily DKE44_007325 IPR005001 RNA-binding protein Hfq DKE44_007360 IPR017926 Glutamine amidotransferase DKE44_007360 IPR001674 GMP synthase, C-terminal DKE44_007360 IPR022310 NAD/GMP synthase DKE44_007360 IPR022955 GMP synthase DKE44_007360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_007360 IPR025777 GMP synthetase ATP pyrophosphatase domain DKE44_007360 IPR029062 Class I glutamine amidotransferase-like DKE44_007360 IPR004739 GMP synthase, glutamine amidotransferase DKE44_007375 IPR002293 Amino acid/polyamine transporter I DKE44_007395 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DKE44_007395 IPR039697 Iron-type alcohol dehydrogenase-like DKE44_007395 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DKE44_007410 IPR011256 Regulatory factor, effector binding domain superfamily DKE44_007410 IPR010499 Bacterial transcription activator, effector binding DKE44_007410 IPR029442 GyrI-like small molecule binding domain DKE44_007415 IPR000417 Hydroxyethylthiazole kinase DKE44_007415 IPR029056 Ribokinase-like DKE44_007470 IPR002701 Chorismate mutase II, prokaryotic-type DKE44_007470 IPR008240 Chorismate mutase, periplasmic DKE44_007470 IPR036263 Chorismate mutase type II superfamily DKE44_007510 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase DKE44_007510 IPR040442 Pyruvate kinase-like domain superfamily DKE44_007510 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DKE44_007510 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DKE44_007520 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG DKE44_007520 IPR005829 Sugar transporter, conserved site DKE44_007520 IPR020846 Major facilitator superfamily domain DKE44_007520 IPR036259 MFS transporter superfamily DKE44_007520 IPR011701 Major facilitator superfamily DKE44_007540 IPR006685 Mechanosensitive ion channel MscS DKE44_007540 IPR010920 LSM domain superfamily DKE44_007540 IPR011066 Mechanosensitive ion channel MscS, C-terminal DKE44_007540 IPR030192 Miniconductance mechanosensitive channel YbdG DKE44_007610 IPR003416 MgtC/SapB/SrpB/YhiD family DKE44_007615 IPR004711 Benzoate transporter DKE44_007620 IPR019888 Transcription regulator AsnC-type DKE44_007620 IPR011991 ArsR-like helix-turn-helix domain DKE44_007620 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DKE44_007620 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_007620 IPR011008 Dimeric alpha-beta barrel DKE44_007620 IPR036390 Winged helix DNA-binding domain superfamily DKE44_007620 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE44_007620 IPR000485 AsnC-type HTH domain DKE44_007635 IPR036390 Winged helix DNA-binding domain superfamily DKE44_007635 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_007635 IPR005119 LysR, substrate-binding DKE44_007635 IPR000847 Transcription regulator HTH, LysR DKE44_007700 IPR029069 HotDog domain superfamily DKE44_007700 IPR006683 Thioesterase domain DKE44_007705 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DKE44_007705 IPR039697 Iron-type alcohol dehydrogenase-like DKE44_007705 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DKE44_007715 IPR036380 Isochorismatase-like superfamily DKE44_007715 IPR000868 Isochorismatase-like DKE44_007720 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_007720 IPR002577 Helix-turn-helix, HxlR type DKE44_007720 IPR011991 ArsR-like helix-turn-helix domain DKE44_007720 IPR036390 Winged helix DNA-binding domain superfamily DKE44_007730 IPR023485 Phosphotyrosine protein phosphatase I DKE44_007730 IPR017867 Protein-tyrosine phosphatase, low molecular weight DKE44_007730 IPR036196 Phosphotyrosine protein phosphatase I superfamily DKE44_007805 IPR036441 Dehydroquinase, class II superfamily DKE44_007805 IPR018509 Dehydroquinase, class II, conserved site DKE44_007805 IPR001874 Dehydroquinase, class II DKE44_007865 IPR006638 Elp3/MiaB/NifB DKE44_007865 IPR013483 Molybdenum cofactor biosynthesis protein A DKE44_007865 IPR007197 Radical SAM DKE44_007865 IPR010505 Molybdenum cofactor synthesis C-terminal DKE44_007865 IPR013785 Aldolase-type TIM barrel DKE44_007865 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site DKE44_007875 IPR003448 Molybdopterin biosynthesis MoaE DKE44_007875 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily DKE44_007885 IPR001453 MoaB/Mog domain DKE44_007885 IPR038987 Molybdopterin biosynthesis protein MoeA-like DKE44_007885 IPR005111 MoeA, C-terminal, domain IV DKE44_007885 IPR036135 MoeA, N-terminal and linker domain superfamily DKE44_007885 IPR005110 MoeA, N-terminal and linker domain DKE44_007885 IPR036425 MoaB/Mog-like domain superfamily DKE44_007885 IPR036688 MoeA, C-terminal, domain IV superfamily DKE44_007890 IPR011991 ArsR-like helix-turn-helix domain DKE44_007890 IPR036390 Winged helix DNA-binding domain superfamily DKE44_007890 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_007890 IPR002577 Helix-turn-helix, HxlR type DKE44_007920 IPR003787 Sulphur relay, DsrE/F-like protein DKE44_007920 IPR027396 DsrEFH-like DKE44_007920 IPR017463 Sulphur relay, TusD/DsrE DKE44_007925 IPR016040 NAD(P)-binding domain DKE44_007925 IPR036291 NAD(P)-binding domain superfamily DKE44_007925 IPR005886 UDP-glucose 4-epimerase DKE44_007960 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site DKE44_007960 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase DKE44_007960 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily DKE44_007985 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DKE44_007985 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DKE44_007985 IPR005467 Histidine kinase domain DKE44_007985 IPR003594 Histidine kinase/HSP90-like ATPase DKE44_007985 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DKE44_007985 IPR013767 PAS fold DKE44_007985 IPR035965 PAS domain superfamily DKE44_007985 IPR000014 PAS domain DKE44_007985 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE44_007995 IPR011817 Uridylate kinase DKE44_007995 IPR001048 Aspartate/glutamate/uridylate kinase DKE44_007995 IPR036393 Acetylglutamate kinase-like superfamily DKE44_007995 IPR015963 Uridylate kinase, bacteria DKE44_008000 IPR023584 Ribosome recycling factor domain DKE44_008000 IPR036191 RRF superfamily DKE44_008000 IPR002661 Ribosome recycling factor DKE44_008015 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase DKE44_008015 IPR036291 NAD(P)-binding domain superfamily DKE44_008015 IPR036169 DXP reductoisomerase, C-terminal domain superfamily DKE44_008015 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal DKE44_008015 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal DKE44_008015 IPR026877 DXP reductoisomerase C-terminal domain DKE44_008045 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily DKE44_008045 IPR001451 Hexapeptide repeat DKE44_008045 IPR018357 Hexapeptide transferase, conserved site DKE44_008045 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal DKE44_008045 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase DKE44_008045 IPR011004 Trimeric LpxA-like superfamily DKE44_008060 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_008060 IPR003783 Regulatory protein RecX DKE44_008065 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DKE44_008065 IPR023400 DNA recombination and repair protein RecA, C-terminal DKE44_008065 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface DKE44_008065 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_008065 IPR020584 DNA recombination/repair protein RecA, conserved site DKE44_008065 IPR013765 DNA recombination and repair protein RecA DKE44_008065 IPR003593 AAA+ ATPase domain DKE44_008095 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_008095 IPR036390 Winged helix DNA-binding domain superfamily DKE44_008095 IPR011991 ArsR-like helix-turn-helix domain DKE44_008095 IPR000485 AsnC-type HTH domain DKE44_008095 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DKE44_008095 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE44_008095 IPR019888 Transcription regulator AsnC-type DKE44_008095 IPR011008 Dimeric alpha-beta barrel DKE44_008125 IPR018045 Sulphate anion transporter, conserved site DKE44_008125 IPR001902 SLC26A/SulP transporter DKE44_008125 IPR002645 STAS domain DKE44_008125 IPR011547 SLC26A/SulP transporter domain DKE44_008125 IPR036513 STAS domain superfamily DKE44_008140 IPR003738 SOS response associated peptidase (SRAP) DKE44_008140 IPR036590 SOS response associated peptidase-like DKE44_008210 IPR036005 Creatinase/aminopeptidase-like DKE44_008210 IPR001714 Peptidase M24, methionine aminopeptidase DKE44_008210 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DKE44_008210 IPR000994 Peptidase M24 DKE44_008225 IPR002109 Glutaredoxin DKE44_008225 IPR033658 Glutaredoxin, PICOT-like DKE44_008225 IPR014434 Monothiol glutaredoxin DKE44_008225 IPR004480 Monothiol glutaredoxin-related DKE44_008225 IPR036249 Thioredoxin-like superfamily DKE44_008230 IPR004636 Acetylornithine/Succinylornithine transaminase family DKE44_008230 IPR005814 Aminotransferase class-III DKE44_008230 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_008230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_008230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_008235 IPR001347 Sugar isomerase (SIS) DKE44_008235 IPR000644 CBS domain DKE44_008235 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type DKE44_008235 IPR035474 KpsF-like, SIS domain DKE44_008260 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DKE44_008260 IPR004390 Signal-recognition particle receptor FtsY DKE44_008260 IPR013822 Signal recognition particle SRP54, helical bundle DKE44_008260 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DKE44_008260 IPR036225 SRP/SRP receptor, N-terminal DKE44_008260 IPR003593 AAA+ ATPase domain DKE44_008260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_008285 IPR011724 Cyd operon protein YbgT DKE44_008285 IPR012994 Membrane bound YbgT-like DKE44_008290 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DKE44_008335 IPR004772 TrkH potassium transport family DKE44_008335 IPR003445 Cation transporter DKE44_008345 IPR001926 Pyridoxal-phosphate dependent enzyme DKE44_008345 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DKE44_008345 IPR005787 Threonine dehydratase, biosynthetic DKE44_008345 IPR038110 Threonine dehydratase, ACT-like domain superfamily DKE44_008345 IPR001721 Threonine dehydratase, ACT-like domain DKE44_008345 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DKE44_008375 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DKE44_008375 IPR003769 Adaptor protein ClpS, core DKE44_008375 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DKE44_008385 IPR003844 Uncharacterised protein family UPF0060 DKE44_008430 IPR033828 CTP synthase GATase domain DKE44_008430 IPR017926 Glutamine amidotransferase DKE44_008430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_008430 IPR029062 Class I glutamine amidotransferase-like DKE44_008430 IPR017456 CTP synthase, N-terminal DKE44_008430 IPR004468 CTP synthase DKE44_008435 IPR013785 Aldolase-type TIM barrel DKE44_008435 IPR006218 DAHP synthetase I/KDSA DKE44_008435 IPR006269 3-deoxy-8-phosphooctulonate synthase DKE44_008440 IPR029017 Enolase-like, N-terminal DKE44_008440 IPR020810 Enolase, C-terminal TIM barrel domain DKE44_008440 IPR036849 Enolase-like, C-terminal domain superfamily DKE44_008440 IPR020809 Enolase, conserved site DKE44_008440 IPR020811 Enolase, N-terminal DKE44_008440 IPR000941 Enolase DKE44_008455 IPR023081 Cell division protein FtsB DKE44_008455 IPR007060 Septum formation initiator FtsL/DivIC DKE44_008460 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DKE44_008460 IPR034683 Cytidylyltransferase IspD/TarI DKE44_008460 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site DKE44_008460 IPR029044 Nucleotide-diphospho-sugar transferases DKE44_008465 IPR004163 Coenzyme A transferase binding site DKE44_008465 IPR037171 NagB/RpiA transferase-like DKE44_008465 IPR012792 3-oxoacid CoA-transferase, subunit A DKE44_008465 IPR004165 Coenzyme A transferase family I DKE44_008470 IPR004165 Coenzyme A transferase family I DKE44_008470 IPR004164 Coenzyme A transferase active site DKE44_008470 IPR012791 3-oxoacid CoA-transferase, subunit B DKE44_008470 IPR037171 NagB/RpiA transferase-like DKE44_008475 IPR020610 Thiolase, active site DKE44_008475 IPR012793 Beta-ketoadipyl CoA thiolase DKE44_008475 IPR002155 Thiolase DKE44_008475 IPR016039 Thiolase-like DKE44_008475 IPR020615 Thiolase, acyl-enzyme intermediate active site DKE44_008475 IPR020617 Thiolase, C-terminal DKE44_008475 IPR020613 Thiolase, conserved site DKE44_008475 IPR020616 Thiolase, N-terminal DKE44_008480 IPR019468 Adenylosuccinate lyase C-terminal DKE44_008480 IPR022761 Fumarate lyase, N-terminal DKE44_008480 IPR020557 Fumarate lyase, conserved site DKE44_008480 IPR000362 Fumarate lyase family DKE44_008480 IPR008948 L-Aspartase-like DKE44_008480 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase DKE44_008480 IPR024083 Fumarase/histidase, N-terminal DKE44_008490 IPR011701 Major facilitator superfamily DKE44_008490 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family DKE44_008490 IPR020846 Major facilitator superfamily domain DKE44_008490 IPR036259 MFS transporter superfamily DKE44_008490 IPR005829 Sugar transporter, conserved site DKE44_008495 IPR012788 4-carboxymuconolactone decarboxylase DKE44_008495 IPR003779 Carboxymuconolactone decarboxylase-like DKE44_008495 IPR029032 AhpD-like DKE44_008505 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit DKE44_008505 IPR015889 Intradiol ring-cleavage dioxygenase, core DKE44_008505 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal DKE44_008515 IPR006626 Parallel beta-helix repeat DKE44_008515 IPR011050 Pectin lyase fold/virulence factor DKE44_008515 IPR012334 Pectin lyase fold DKE44_008515 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain DKE44_008535 IPR007272 Sulphur transport domain DKE44_008555 IPR000847 Transcription regulator HTH, LysR DKE44_008555 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_008555 IPR036390 Winged helix DNA-binding domain superfamily DKE44_008555 IPR005119 LysR, substrate-binding DKE44_008555 IPR037416 Nodulation protein D, PBP2 DKE44_008560 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE44_008560 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE44_008560 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE44_008560 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE44_008560 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE44_008560 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE44_008560 IPR006089 Acyl-CoA dehydrogenase, conserved site DKE44_008575 IPR036291 NAD(P)-binding domain superfamily DKE44_008575 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_008575 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_008600 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DKE44_008600 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE44_008600 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE44_008600 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE44_008635 IPR002563 Flavin reductase like domain DKE44_008635 IPR012349 FMN-binding split barrel DKE44_008635 IPR036390 Winged helix DNA-binding domain superfamily DKE44_008635 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_008655 IPR016163 Aldehyde dehydrogenase, C-terminal DKE44_008655 IPR016161 Aldehyde/histidinol dehydrogenase DKE44_008655 IPR016162 Aldehyde dehydrogenase, N-terminal DKE44_008655 IPR016160 Aldehyde dehydrogenase, cysteine active site DKE44_008655 IPR015590 Aldehyde dehydrogenase domain DKE44_008655 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DKE44_008675 IPR012791 3-oxoacid CoA-transferase, subunit B DKE44_008675 IPR004165 Coenzyme A transferase family I DKE44_008675 IPR004164 Coenzyme A transferase active site DKE44_008675 IPR037171 NagB/RpiA transferase-like DKE44_008680 IPR037171 NagB/RpiA transferase-like DKE44_008680 IPR012792 3-oxoacid CoA-transferase, subunit A DKE44_008680 IPR004165 Coenzyme A transferase family I DKE44_008680 IPR004163 Coenzyme A transferase binding site DKE44_008690 IPR003464 Muconolactone delta-isomerase DKE44_008690 IPR026029 Muconolactone isomerase domain DKE44_008690 IPR011008 Dimeric alpha-beta barrel DKE44_008695 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DKE44_008695 IPR013370 Muconate/chloromuconate cycloisomerase DKE44_008695 IPR036849 Enolase-like, C-terminal domain superfamily DKE44_008695 IPR029017 Enolase-like, N-terminal DKE44_008695 IPR029065 Enolase C-terminal domain-like DKE44_008695 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DKE44_008695 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DKE44_008765 IPR011789 Cu(I)-responsive transcriptional regulator DKE44_008765 IPR009061 Putative DNA-binding domain superfamily DKE44_008765 IPR000551 MerR-type HTH domain DKE44_008775 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE44_008775 IPR001279 Metallo-beta-lactamase DKE44_008775 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D DKE44_008780 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE44_008780 IPR001647 DNA-binding HTH domain, TetR-type DKE44_008780 IPR009057 Homeobox-like domain superfamily DKE44_008780 IPR013570 Transcription regulator YsiA, C-terminal DKE44_008810 IPR009057 Homeobox-like domain superfamily DKE44_008810 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DKE44_008810 IPR032551 HTH-type transcriptional repressor, C-terminal DKE44_008810 IPR001647 DNA-binding HTH domain, TetR-type DKE44_008840 IPR020846 Major facilitator superfamily domain DKE44_008840 IPR011701 Major facilitator superfamily DKE44_008840 IPR036259 MFS transporter superfamily DKE44_008845 IPR032466 Metal-dependent hydrolase DKE44_008845 IPR006680 Amidohydrolase-related DKE44_008860 IPR005119 LysR, substrate-binding DKE44_008860 IPR000847 Transcription regulator HTH, LysR DKE44_008860 IPR036390 Winged helix DNA-binding domain superfamily DKE44_008860 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_008920 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DKE44_008920 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DKE44_008920 IPR006398 2-hydroxy-3-oxopropionate reductase DKE44_008920 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DKE44_008920 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DKE44_008920 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DKE44_008920 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DKE44_008920 IPR036291 NAD(P)-binding domain superfamily DKE44_008985 IPR036928 Amidase signature (AS) superfamily DKE44_008985 IPR023631 Amidase signature domain DKE44_008985 IPR020556 Amidase, conserved site DKE44_008985 IPR000120 Amidase DKE44_009035 IPR002912 ACT domain DKE44_009035 IPR012675 Beta-grasp domain superfamily DKE44_009035 IPR004095 TGS DKE44_009035 IPR004811 RelA/SpoT family DKE44_009035 IPR007685 RelA/SpoT DKE44_009035 IPR003607 HD/PDEase domain DKE44_009035 IPR033655 RelA, TGS domain DKE44_009035 IPR012676 TGS-like DKE44_009080 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_009080 IPR000847 Transcription regulator HTH, LysR DKE44_009080 IPR005119 LysR, substrate-binding DKE44_009080 IPR036390 Winged helix DNA-binding domain superfamily DKE44_009135 IPR036937 Fimbrial-type adhesion domain superfamily DKE44_009135 IPR039458 FimA-like DKE44_009135 IPR008966 Adhesion domain superfamily DKE44_009140 IPR008962 PapD-like superfamily DKE44_009140 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DKE44_009140 IPR001829 Pili assembly chaperone, bacterial DKE44_009140 IPR016148 Pili assembly chaperone, C-terminal DKE44_009140 IPR018046 Pili assembly chaperone, conserved site DKE44_009140 IPR016147 Pili assembly chaperone, N-terminal DKE44_009140 IPR013783 Immunoglobulin-like fold DKE44_009195 IPR001736 Phospholipase D/Transphosphatidylase DKE44_009195 IPR025202 Phospholipase D-like domain DKE44_009195 IPR030871 Cardiolipin synthase C DKE44_009200 IPR025202 Phospholipase D-like domain DKE44_009200 IPR001736 Phospholipase D/Transphosphatidylase DKE44_009200 IPR030871 Cardiolipin synthase C DKE44_009230 IPR022479 Coenzyme PQQ synthesis D, bacteria DKE44_009230 IPR008792 Coenzyme PQQ synthesis protein D DKE44_009230 IPR041881 Coenzyme PQQ synthesis protein D superfamily DKE44_009235 IPR039068 Pyrroloquinoline-quinone synthase-like DKE44_009235 IPR011845 Coenzyme PQQ biosynthesis protein C DKE44_009235 IPR004305 Thiaminase-2/PQQC DKE44_009235 IPR016084 Haem oxygenase-like, multi-helical DKE44_009245 IPR011725 Coenzyme PQQ biosynthesis protein A DKE44_009275 IPR009081 Phosphopantetheine binding ACP domain DKE44_009275 IPR036736 ACP-like superfamily DKE44_009275 IPR016291 Isochorismatase DKE44_009275 IPR000868 Isochorismatase-like DKE44_009275 IPR036380 Isochorismatase-like superfamily DKE44_009290 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_009290 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_009290 IPR036291 NAD(P)-binding domain superfamily DKE44_009290 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase DKE44_009300 IPR038020 MbtH-like domain superfamily DKE44_009300 IPR005153 MbtH-like domain DKE44_009300 IPR037407 MbtH-like protein DKE44_009310 IPR023722 Enterobactin exporter, EntS DKE44_009310 IPR020846 Major facilitator superfamily domain DKE44_009310 IPR036259 MFS transporter superfamily DKE44_009310 IPR010290 Transmembrane secretion effector DKE44_009350 IPR005116 Transport-associated OB, type 1 DKE44_009350 IPR036390 Winged helix DNA-binding domain superfamily DKE44_009350 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_009350 IPR000847 Transcription regulator HTH, LysR DKE44_009350 IPR004606 Molybdenum-pterin binding DKE44_009350 IPR003725 Molybdenum-binding protein ModE, N-terminal DKE44_009350 IPR016462 Molybdate-dependent transcriptional regulator ModE DKE44_009350 IPR008995 Molybdate/tungstate binding, C-terminal DKE44_009370 IPR018060 DNA binding HTH domain, AraC-type DKE44_009370 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like DKE44_009370 IPR009057 Homeobox-like domain superfamily DKE44_009370 IPR037923 Transcription regulator HTH-like DKE44_009370 IPR018062 HTH domain AraC-type, conserved site DKE44_009380 IPR002563 Flavin reductase like domain DKE44_009380 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_009380 IPR012349 FMN-binding split barrel DKE44_009380 IPR036390 Winged helix DNA-binding domain superfamily DKE44_009390 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_009390 IPR036291 NAD(P)-binding domain superfamily DKE44_009390 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_009395 IPR002925 Dienelactone hydrolase DKE44_009395 IPR029058 Alpha/Beta hydrolase fold DKE44_009400 IPR020846 Major facilitator superfamily domain DKE44_009400 IPR005829 Sugar transporter, conserved site DKE44_009400 IPR036259 MFS transporter superfamily DKE44_009400 IPR011701 Major facilitator superfamily DKE44_009400 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family DKE44_009410 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_009410 IPR036291 NAD(P)-binding domain superfamily DKE44_009410 IPR011294 3-hydroxybutyrate dehydrogenase DKE44_009410 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_009455 IPR004165 Coenzyme A transferase family I DKE44_009455 IPR012792 3-oxoacid CoA-transferase, subunit A DKE44_009455 IPR004163 Coenzyme A transferase binding site DKE44_009455 IPR037171 NagB/RpiA transferase-like DKE44_009475 IPR000847 Transcription regulator HTH, LysR DKE44_009475 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_009475 IPR036390 Winged helix DNA-binding domain superfamily DKE44_009475 IPR005119 LysR, substrate-binding DKE44_009495 IPR008948 L-Aspartase-like DKE44_009495 IPR022761 Fumarate lyase, N-terminal DKE44_009495 IPR004708 Aspartate ammonia-lyase DKE44_009495 IPR024083 Fumarase/histidase, N-terminal DKE44_009495 IPR018951 Fumarase C, C-terminal DKE44_009495 IPR020557 Fumarate lyase, conserved site DKE44_009495 IPR000362 Fumarate lyase family DKE44_009525 IPR035906 MetI-like superfamily DKE44_009525 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_009530 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain DKE44_009530 IPR010068 Taurine ABC transporter, substrate-binding protein TauA DKE44_009530 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKE44_009590 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE44_009590 IPR029021 Protein-tyrosine phosphatase-like DKE44_009590 IPR001279 Metallo-beta-lactamase DKE44_009590 IPR005939 Beta-lactamase hydrolase-like DKE44_009610 IPR011032 GroES-like superfamily DKE44_009610 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DKE44_009610 IPR013154 Alcohol dehydrogenase, N-terminal DKE44_009610 IPR013149 Alcohol dehydrogenase, C-terminal DKE44_009610 IPR020843 Polyketide synthase, enoylreductase domain DKE44_009610 IPR036291 NAD(P)-binding domain superfamily DKE44_009615 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_009615 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_009615 IPR014007 Acetoin reductase DKE44_009615 IPR036291 NAD(P)-binding domain superfamily DKE44_009620 IPR006258 Dihydrolipoamide dehydrogenase DKE44_009620 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DKE44_009620 IPR023753 FAD/NAD(P)-binding domain DKE44_009620 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DKE44_009620 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKE44_009620 IPR036188 FAD/NAD(P)-binding domain superfamily DKE44_009620 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DKE44_009625 IPR036625 E3-binding domain superfamily DKE44_009625 IPR011053 Single hybrid motif DKE44_009625 IPR004167 Peripheral subunit-binding domain DKE44_009625 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DKE44_009625 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DKE44_009625 IPR000089 Biotin/lipoyl attachment DKE44_009625 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DKE44_009625 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex DKE44_009635 IPR001017 Dehydrogenase, E1 component DKE44_009635 IPR029061 Thiamin diphosphate-binding fold DKE44_009655 IPR013656 PAS fold-4 DKE44_009655 IPR035965 PAS domain superfamily DKE44_009655 IPR000700 PAS-associated, C-terminal DKE44_009655 IPR000160 GGDEF domain DKE44_009655 IPR029787 Nucleotide cyclase DKE44_009655 IPR000014 PAS domain DKE44_009660 IPR020541 Chorismate synthase, conserved site DKE44_009660 IPR035904 Chorismate synthase AroC superfamily DKE44_009660 IPR000453 Chorismate synthase DKE44_009690 IPR038068 YcgL-like superfamily DKE44_009690 IPR027354 YcgL domain DKE44_009775 IPR036265 HIT-like superfamily DKE44_009775 IPR001310 Histidine triad (HIT) protein DKE44_009775 IPR019808 Histidine triad, conserved site DKE44_009775 IPR039384 HINT family DKE44_009775 IPR011146 HIT-like domain DKE44_009800 IPR000412 ABC-2 transporter DKE44_009805 IPR000412 ABC-2 transporter DKE44_009910 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DKE44_009910 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DKE44_009910 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DKE44_009945 IPR023034 Peptidyl-prolyl isomerase SurA DKE44_009945 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DKE44_009945 IPR015391 SurA N-terminal DKE44_009945 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DKE44_009945 IPR027304 Trigger factor/SurA domain superfamily DKE44_009965 IPR010242 Transcription factor HTH, IscR DKE44_009965 IPR036390 Winged helix DNA-binding domain superfamily DKE44_009965 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_009965 IPR000944 Transcription regulator Rrf2-type DKE44_009965 IPR030489 Transcription regulator Rrf2-type, conserved site DKE44_009970 IPR010240 Cysteine desulfurase IscS DKE44_009970 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DKE44_009970 IPR000192 Aminotransferase class V domain DKE44_009970 IPR016454 Cysteine desulfurase DKE44_009970 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_009970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_009970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_009975 IPR011339 ISC system FeS cluster assembly, IscU scaffold DKE44_009975 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal DKE44_009985 IPR004640 Co-chaperone Hsc20 DKE44_009985 IPR036386 HscB, C-terminal domain superfamily DKE44_009985 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain DKE44_009985 IPR001623 DnaJ domain DKE44_009985 IPR036869 Chaperone J-domain superfamily DKE44_009995 IPR012675 Beta-grasp domain superfamily DKE44_009995 IPR036010 2Fe-2S ferredoxin-like superfamily DKE44_009995 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria DKE44_009995 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DKE44_009995 IPR018298 Adrenodoxin, iron-sulphur binding site DKE44_009995 IPR001055 Adrenodoxin DKE44_010040 IPR036510 Ribosomal protein S20 superfamily DKE44_010040 IPR002583 Ribosomal protein S20 DKE44_010070 IPR035906 MetI-like superfamily DKE44_010070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_010075 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_010075 IPR035906 MetI-like superfamily DKE44_010100 IPR039426 Vitamin B12 transporter BtuB-like DKE44_010100 IPR012910 TonB-dependent receptor, plug domain DKE44_010100 IPR037066 TonB-dependent receptor, plug domain superfamily DKE44_010100 IPR010101 TonB-dependent vitamin B12 transporter BtuB DKE44_010100 IPR000531 TonB-dependent receptor-like, beta-barrel DKE44_010100 IPR010916 TonB box, conserved site DKE44_010100 IPR010917 TonB-dependent receptor, conserved site DKE44_010100 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DKE44_010120 IPR003400 Biopolymer transport protein ExbD/TolR DKE44_010415 IPR005685 Integration host factor, beta subunit DKE44_010415 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DKE44_010415 IPR020816 Histone-like DNA-binding protein, conserved site DKE44_010415 IPR000119 Histone-like DNA-binding protein DKE44_010420 IPR000110 Ribosomal protein S1 DKE44_010420 IPR022967 RNA-binding domain, S1 DKE44_010420 IPR003029 S1 domain DKE44_010420 IPR012340 Nucleic acid-binding, OB-fold DKE44_010460 IPR012902 Prokaryotic N-terminal methylation site DKE44_010460 IPR010055 Type II secretion system protein J DKE44_010465 IPR012902 Prokaryotic N-terminal methylation site DKE44_010465 IPR010052 Type II secretion system protein I DKE44_010465 IPR003413 Type II secretion system protein I domain DKE44_010480 IPR018228 Deoxyribonuclease, TatD-related, conserved site DKE44_010480 IPR032466 Metal-dependent hydrolase DKE44_010480 IPR001130 TatD family DKE44_010480 IPR015991 Uncharacterised hydrolase TatD-type DKE44_010495 IPR003329 Acylneuraminate cytidylyltransferase DKE44_010495 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase DKE44_010495 IPR029044 Nucleotide-diphospho-sugar transferases DKE44_010500 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_010500 IPR003758 Tetraacyldisaccharide 4'-kinase DKE44_010505 IPR011917 ABC transporter, lipid A export, MsbA DKE44_010505 IPR039421 Type I protein exporter DKE44_010505 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_010505 IPR003439 ABC transporter-like DKE44_010505 IPR036640 ABC transporter type 1, transmembrane domain superfamily DKE44_010505 IPR011527 ABC transporter type 1, transmembrane domain DKE44_010505 IPR003593 AAA+ ATPase domain DKE44_010505 IPR017871 ABC transporter, conserved site DKE44_010535 IPR005835 Nucleotidyl transferase domain DKE44_010535 IPR029044 Nucleotide-diphospho-sugar transferases DKE44_010545 IPR007543 LptD, C-terminal DKE44_010545 IPR005653 Organic solvent tolerance-like, N-terminal DKE44_010545 IPR020889 LPS-assembly protein LptD DKE44_010555 IPR013785 Aldolase-type TIM barrel DKE44_010555 IPR000771 Fructose-bisphosphate aldolase, class-II DKE44_010555 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype DKE44_010565 IPR001576 Phosphoglycerate kinase DKE44_010565 IPR015911 Phosphoglycerate kinase, conserved site DKE44_010565 IPR015824 Phosphoglycerate kinase, N-terminal DKE44_010565 IPR036043 Phosphoglycerate kinase superfamily DKE44_010590 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_010590 IPR001845 HTH ArsR-type DNA-binding domain DKE44_010590 IPR036390 Winged helix DNA-binding domain superfamily DKE44_010590 IPR011991 ArsR-like helix-turn-helix domain DKE44_010625 IPR017453 Glycine cleavage system H-protein, subgroup DKE44_010625 IPR033753 Glycine cleavage system H-protein/Simiate DKE44_010625 IPR002930 Glycine cleavage system H-protein DKE44_010625 IPR000089 Biotin/lipoyl attachment DKE44_010625 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DKE44_010625 IPR011053 Single hybrid motif DKE44_010630 IPR029035 DHS-like NAD/FAD-binding domain superfamily DKE44_010630 IPR003000 Sirtuin family DKE44_010630 IPR026591 Sirtuin, catalytic core small domain superfamily DKE44_010630 IPR026590 Sirtuin family, catalytic core domain DKE44_010630 IPR027546 Sirtuin, class III DKE44_010675 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DKE44_010675 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DKE44_010675 IPR023480 Uncharacterised protein family UPF0312/YceI DKE44_010710 IPR016181 Acyl-CoA N-acyltransferase DKE44_010710 IPR000182 GNAT domain DKE44_010725 IPR036652 YjeF N-terminal domain superfamily DKE44_010725 IPR004443 YjeF N-terminal domain DKE44_010725 IPR029056 Ribokinase-like DKE44_010725 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr DKE44_010725 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase DKE44_010825 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DKE44_010825 IPR009057 Homeobox-like domain superfamily DKE44_010825 IPR001647 DNA-binding HTH domain, TetR-type DKE44_010845 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE44_010845 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DKE44_010845 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_010845 IPR019888 Transcription regulator AsnC-type DKE44_010845 IPR011008 Dimeric alpha-beta barrel DKE44_010845 IPR011991 ArsR-like helix-turn-helix domain DKE44_010845 IPR036390 Winged helix DNA-binding domain superfamily DKE44_010845 IPR000485 AsnC-type HTH domain DKE44_010865 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DKE44_010865 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ DKE44_010865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_010865 IPR035906 MetI-like superfamily DKE44_010905 IPR026253 Methionine import ATP-binding protein MetN DKE44_010905 IPR003593 AAA+ ATPase domain DKE44_010905 IPR017871 ABC transporter, conserved site DKE44_010905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_010905 IPR018449 NIL domain DKE44_010905 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain DKE44_010905 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal DKE44_010905 IPR003439 ABC transporter-like DKE44_010910 IPR035906 MetI-like superfamily DKE44_010910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_010940 IPR011606 Branched-chain amino acid transport, permease DKE44_010945 IPR008407 Branched-chain amino acid transport, AzlD DKE44_010955 IPR011761 ATP-grasp fold DKE44_010955 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DKE44_010955 IPR016185 Pre-ATP-grasp domain superfamily DKE44_010955 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase DKE44_010955 IPR013815 ATP-grasp fold, subdomain 1 DKE44_010955 IPR011054 Rudiment single hybrid motif DKE44_010965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_010965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_010965 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_010965 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ DKE44_010965 IPR004839 Aminotransferase, class I/classII DKE44_010980 IPR036249 Thioredoxin-like superfamily DKE44_010980 IPR029760 Glutathione peroxidase conserved site DKE44_010980 IPR029759 Glutathione peroxidase active site DKE44_010980 IPR000889 Glutathione peroxidase DKE44_010985 IPR028427 Peptide methionine sulfoxide reductase DKE44_010985 IPR002579 Peptide methionine sulphoxide reductase MrsB DKE44_010985 IPR011057 Mss4-like superfamily DKE44_011025 IPR001451 Hexapeptide repeat DKE44_011025 IPR018357 Hexapeptide transferase, conserved site DKE44_011025 IPR005881 Serine O-acetyltransferase DKE44_011025 IPR042122 Serine acetyltransferase, N-terminal domain superfamily DKE44_011025 IPR011004 Trimeric LpxA-like superfamily DKE44_011045 IPR015942 Asp/Glu/hydantoin racemase DKE44_011065 IPR036259 MFS transporter superfamily DKE44_011065 IPR005828 Major facilitator, sugar transporter-like DKE44_011065 IPR005829 Sugar transporter, conserved site DKE44_011065 IPR020846 Major facilitator superfamily domain DKE44_011075 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DKE44_011075 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE44_011075 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE44_011075 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE44_011075 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE44_011075 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE44_011100 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_011100 IPR000524 Transcription regulator HTH, GntR DKE44_011100 IPR036390 Winged helix DNA-binding domain superfamily DKE44_011100 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_011100 IPR004839 Aminotransferase, class I/classII DKE44_011100 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_011100 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_011135 IPR005261 Conserved hypothetical protein CHP00659 DKE44_011135 IPR007300 CidB/LrgB family DKE44_011140 IPR005538 LrgA/CidA family DKE44_011140 IPR023760 Holin-like protein CidA DKE44_011150 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal DKE44_011150 IPR004045 Glutathione S-transferase, N-terminal DKE44_011150 IPR036249 Thioredoxin-like superfamily DKE44_011150 IPR040079 Glutathione Transferase family DKE44_011150 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DKE44_011150 IPR010987 Glutathione S-transferase, C-terminal-like DKE44_011170 IPR001763 Rhodanese-like domain DKE44_011170 IPR036873 Rhodanese-like domain superfamily DKE44_011170 IPR023695 Thiosulfate sulfurtransferase, bacterial DKE44_011195 IPR036390 Winged helix DNA-binding domain superfamily DKE44_011195 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_011195 IPR000847 Transcription regulator HTH, LysR DKE44_011195 IPR005119 LysR, substrate-binding DKE44_011200 IPR018313 Solute-binding protein family 3, conserved site DKE44_011200 IPR001320 Ionotropic glutamate receptor DKE44_011200 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKE44_011210 IPR003439 ABC transporter-like DKE44_011210 IPR017871 ABC transporter, conserved site DKE44_011210 IPR003593 AAA+ ATPase domain DKE44_011210 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DKE44_011210 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_011215 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DKE44_011215 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_011215 IPR035906 MetI-like superfamily DKE44_011220 IPR035906 MetI-like superfamily DKE44_011220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_011220 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DKE44_011240 IPR036390 Winged helix DNA-binding domain superfamily DKE44_011240 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_011240 IPR000847 Transcription regulator HTH, LysR DKE44_011240 IPR005119 LysR, substrate-binding DKE44_011255 IPR037522 HD-GYP domain DKE44_011255 IPR003607 HD/PDEase domain DKE44_011255 IPR011006 CheY-like superfamily DKE44_011255 IPR001789 Signal transduction response regulator, receiver domain DKE44_011275 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_011275 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DKE44_011275 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE44_011275 IPR036390 Winged helix DNA-binding domain superfamily DKE44_011275 IPR000485 AsnC-type HTH domain DKE44_011275 IPR011008 Dimeric alpha-beta barrel DKE44_011275 IPR019888 Transcription regulator AsnC-type DKE44_011275 IPR011991 ArsR-like helix-turn-helix domain DKE44_011285 IPR015927 Peptidase S24/S26A/S26B/S26C DKE44_011285 IPR039418 LexA-like DKE44_011285 IPR006197 Peptidase S24, LexA-like DKE44_011285 IPR036286 LexA/Signal peptidase-like superfamily DKE44_011380 IPR000873 AMP-dependent synthetase/ligase DKE44_011380 IPR020845 AMP-binding, conserved site DKE44_011380 IPR025110 AMP-binding enzyme, C-terminal domain DKE44_011390 IPR001647 DNA-binding HTH domain, TetR-type DKE44_011390 IPR009057 Homeobox-like domain superfamily DKE44_011395 IPR006089 Acyl-CoA dehydrogenase, conserved site DKE44_011395 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE44_011395 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE44_011395 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE44_011395 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE44_011395 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE44_011395 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE44_011405 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE44_011405 IPR001753 Enoyl-CoA hydratase/isomerase DKE44_011405 IPR029045 ClpP/crotonase-like domain superfamily DKE44_011405 IPR014748 Enoyl-CoA hydratase, C-terminal DKE44_011410 IPR011764 Biotin carboxylation domain DKE44_011410 IPR011054 Rudiment single hybrid motif DKE44_011410 IPR005481 Biotin carboxylase-like, N-terminal domain DKE44_011410 IPR011761 ATP-grasp fold DKE44_011410 IPR000089 Biotin/lipoyl attachment DKE44_011410 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DKE44_011410 IPR016185 Pre-ATP-grasp domain superfamily DKE44_011410 IPR005482 Biotin carboxylase, C-terminal DKE44_011410 IPR011053 Single hybrid motif DKE44_011410 IPR001882 Biotin-binding site DKE44_011415 IPR000891 Pyruvate carboxyltransferase DKE44_011415 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site DKE44_011415 IPR027167 Hydroxymethylglutaryl-CoA lyase DKE44_011415 IPR013785 Aldolase-type TIM barrel DKE44_011435 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DKE44_011435 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE44_011435 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE44_011435 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE44_011435 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE44_011435 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE44_011435 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE44_011455 IPR004165 Coenzyme A transferase family I DKE44_011455 IPR004164 Coenzyme A transferase active site DKE44_011455 IPR012791 3-oxoacid CoA-transferase, subunit B DKE44_011455 IPR037171 NagB/RpiA transferase-like DKE44_011520 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_011520 IPR005471 Transcription regulator IclR, N-terminal DKE44_011520 IPR014757 Transcription regulator IclR, C-terminal DKE44_011520 IPR029016 GAF-like domain superfamily DKE44_011520 IPR036390 Winged helix DNA-binding domain superfamily DKE44_011530 IPR006089 Acyl-CoA dehydrogenase, conserved site DKE44_011530 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE44_011530 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE44_011530 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE44_011530 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DKE44_011530 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE44_011530 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE44_011545 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_011545 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_011545 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_011545 IPR012703 2-aminoethylphosphonate--pyruvate transaminase DKE44_011545 IPR000192 Aminotransferase class V domain DKE44_011545 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase DKE44_011550 IPR006076 FAD dependent oxidoreductase DKE44_011550 IPR036188 FAD/NAD(P)-binding domain superfamily DKE44_011550 IPR006281 Sarcosine oxidase, monomeric DKE44_011615 IPR022742 Serine aminopeptidase, S33 DKE44_011615 IPR029058 Alpha/Beta hydrolase fold DKE44_011630 IPR002575 Aminoglycoside phosphotransferase DKE44_011630 IPR011009 Protein kinase-like domain superfamily DKE44_011650 IPR001647 DNA-binding HTH domain, TetR-type DKE44_011650 IPR009057 Homeobox-like domain superfamily DKE44_011650 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DKE44_011650 IPR032551 HTH-type transcriptional repressor, C-terminal DKE44_011675 IPR017578 Alpha-ribazole phosphatase, CobC DKE44_011675 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DKE44_011675 IPR029033 Histidine phosphatase superfamily DKE44_011675 IPR013078 Histidine phosphatase superfamily, clade-1 DKE44_011685 IPR006683 Thioesterase domain DKE44_011685 IPR029069 HotDog domain superfamily DKE44_011685 IPR003736 Phenylacetic acid degradation-related domain DKE44_011685 IPR011973 Phenylacetic acid degradation protein PaaD DKE44_011690 IPR023446 Carnitine operon protein CaiE DKE44_011690 IPR001451 Hexapeptide repeat DKE44_011690 IPR011004 Trimeric LpxA-like superfamily DKE44_011700 IPR000873 AMP-dependent synthetase/ligase DKE44_011700 IPR042099 AMP-dependent synthetase-like superfamily DKE44_011700 IPR028154 AMP-dependent ligase, C-terminal DKE44_011700 IPR011880 Phenylacetate-CoA ligase DKE44_011720 IPR029045 ClpP/crotonase-like domain superfamily DKE44_011720 IPR014748 Enoyl-CoA hydratase, C-terminal DKE44_011720 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE44_011720 IPR001753 Enoyl-CoA hydratase/isomerase DKE44_011725 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit DKE44_011725 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DKE44_011725 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DKE44_011725 IPR017927 FAD-binding domain, ferredoxin reductase-type DKE44_011725 IPR001433 Oxidoreductase FAD/NAD(P)-binding DKE44_011725 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DKE44_011725 IPR012675 Beta-grasp domain superfamily DKE44_011725 IPR017938 Riboflavin synthase-like beta-barrel DKE44_011725 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DKE44_011725 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DKE44_011725 IPR036010 2Fe-2S ferredoxin-like superfamily DKE44_011730 IPR002744 MIP18 family-like DKE44_011730 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit DKE44_011730 IPR034904 Fe-S cluster assembly domain superfamily DKE44_011740 IPR009359 Phenylacetic acid degradation B DKE44_011740 IPR038693 Phenylacetyl-CoA epoxidase, subunit B DKE44_011755 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DKE44_011755 IPR005131 Serine dehydratase beta chain DKE44_011755 IPR029009 Allosteric substrate binding domain superfamily DKE44_011755 IPR005130 Serine dehydratase-like, alpha subunit DKE44_011765 IPR009061 Putative DNA-binding domain superfamily DKE44_011765 IPR000551 MerR-type HTH domain DKE44_011765 IPR010211 Redox-sensitive transcriptional activator SoxR DKE44_011765 IPR015358 Transcription regulator MerR, DNA binding DKE44_011780 IPR003828 Epoxyqueuosine reductase QueH DKE44_011800 IPR016193 Cytidine deaminase-like DKE44_011800 IPR002125 Cytidine and deoxycytidylate deaminase domain DKE44_011800 IPR016192 APOBEC/CMP deaminase, zinc-binding DKE44_011805 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain DKE44_011805 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_011805 IPR000847 Transcription regulator HTH, LysR DKE44_011805 IPR005119 LysR, substrate-binding DKE44_011805 IPR036390 Winged helix DNA-binding domain superfamily DKE44_011840 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_011840 IPR017871 ABC transporter, conserved site DKE44_011840 IPR003439 ABC transporter-like DKE44_011840 IPR003593 AAA+ ATPase domain DKE44_011855 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DKE44_011855 IPR013321 Arc-type ribbon-helix-helix DKE44_011855 IPR010985 Ribbon-helix-helix DKE44_011855 IPR014864 Transcription factor, NikR, nickel binding C-terminal DKE44_011855 IPR022988 Nickel-responsive transcriptional regulator NikR DKE44_011855 IPR002145 Ribbon-helix-helix protein, CopG DKE44_011870 IPR036390 Winged helix DNA-binding domain superfamily DKE44_011870 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_011870 IPR002577 Helix-turn-helix, HxlR type DKE44_011875 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF DKE44_011875 IPR003680 Flavodoxin-like fold DKE44_011875 IPR029039 Flavoprotein-like superfamily DKE44_011895 IPR036291 NAD(P)-binding domain superfamily DKE44_011895 IPR011032 GroES-like superfamily DKE44_011895 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DKE44_011895 IPR027399 Alcohol dehydrogenase GroES-associated DKE44_011895 IPR013154 Alcohol dehydrogenase, N-terminal DKE44_011895 IPR013149 Alcohol dehydrogenase, C-terminal DKE44_011900 IPR013149 Alcohol dehydrogenase, C-terminal DKE44_011900 IPR013154 Alcohol dehydrogenase, N-terminal DKE44_011900 IPR027399 Alcohol dehydrogenase GroES-associated DKE44_011900 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DKE44_011900 IPR011032 GroES-like superfamily DKE44_011900 IPR036291 NAD(P)-binding domain superfamily DKE44_011905 IPR036291 NAD(P)-binding domain superfamily DKE44_011905 IPR027399 Alcohol dehydrogenase GroES-associated DKE44_011905 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DKE44_011905 IPR011032 GroES-like superfamily DKE44_011905 IPR013154 Alcohol dehydrogenase, N-terminal DKE44_011905 IPR013149 Alcohol dehydrogenase, C-terminal DKE44_011915 IPR009057 Homeobox-like domain superfamily DKE44_011915 IPR018060 DNA binding HTH domain, AraC-type DKE44_011915 IPR020449 Transcription regulator HTH, AraC- type DKE44_011915 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DKE44_011935 IPR036397 Ribonuclease H superfamily DKE44_011935 IPR012337 Ribonuclease H-like superfamily DKE44_011935 IPR001584 Integrase, catalytic core DKE44_011935 IPR038965 Transposase InsF-like DKE44_011935 IPR025948 HTH-like domain DKE44_012000 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DKE44_012000 IPR012925 TipAS antibiotic-recognition domain DKE44_012000 IPR009061 Putative DNA-binding domain superfamily DKE44_012000 IPR000551 MerR-type HTH domain DKE44_012005 IPR012156 Cold shock, CspA DKE44_012005 IPR011129 Cold shock domain DKE44_012005 IPR002059 Cold-shock protein, DNA-binding DKE44_012005 IPR012340 Nucleic acid-binding, OB-fold DKE44_012005 IPR019844 Cold-shock (CSD) domain DKE44_012010 IPR017926 Glutamine amidotransferase DKE44_012010 IPR029062 Class I glutamine amidotransferase-like DKE44_012025 IPR011991 ArsR-like helix-turn-helix domain DKE44_012025 IPR036390 Winged helix DNA-binding domain superfamily DKE44_012025 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_012025 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DKE44_012025 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DKE44_012025 IPR019888 Transcription regulator AsnC-type DKE44_012025 IPR000485 AsnC-type HTH domain DKE44_012025 IPR011008 Dimeric alpha-beta barrel DKE44_012030 IPR011051 RmlC-like cupin domain superfamily DKE44_012030 IPR009664 Pyrimidine/purine nucleoside phosphorylase DKE44_012030 IPR014710 RmlC-like jelly roll fold DKE44_012040 IPR037066 TonB-dependent receptor, plug domain superfamily DKE44_012040 IPR012910 TonB-dependent receptor, plug domain DKE44_012040 IPR039423 TonB-dependent receptor-like DKE44_012100 IPR035919 EAL domain superfamily DKE44_012100 IPR000160 GGDEF domain DKE44_012100 IPR005330 MHYT domain DKE44_012100 IPR029787 Nucleotide cyclase DKE44_012100 IPR001633 EAL domain DKE44_012110 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_012110 IPR000847 Transcription regulator HTH, LysR DKE44_012110 IPR005119 LysR, substrate-binding DKE44_012110 IPR036390 Winged helix DNA-binding domain superfamily DKE44_012125 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_012125 IPR036291 NAD(P)-binding domain superfamily DKE44_012125 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_012135 IPR036291 NAD(P)-binding domain superfamily DKE44_012135 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_012135 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_012150 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DKE44_012150 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DKE44_012150 IPR000813 7Fe ferredoxin DKE44_012150 IPR022569 Ferredoxin, C-terminal DKE44_012170 IPR018357 Hexapeptide transferase, conserved site DKE44_012170 IPR001451 Hexapeptide repeat DKE44_012170 IPR011004 Trimeric LpxA-like superfamily DKE44_012180 IPR006144 Secretion protein HlyD, conserved site DKE44_012180 IPR010129 Type I secretion membrane fusion protein, HlyD family DKE44_012185 IPR011527 ABC transporter type 1, transmembrane domain DKE44_012185 IPR036640 ABC transporter type 1, transmembrane domain superfamily DKE44_012185 IPR003439 ABC transporter-like DKE44_012185 IPR017871 ABC transporter, conserved site DKE44_012185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_012185 IPR039421 Type I protein exporter DKE44_012185 IPR005897 Peptidase C39, ABC-type bacteriocin transporter DKE44_012185 IPR003593 AAA+ ATPase domain DKE44_012185 IPR005074 Peptidase C39, bacteriocin processing DKE44_012200 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DKE44_012200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_012200 IPR017871 ABC transporter, conserved site DKE44_012200 IPR003593 AAA+ ATPase domain DKE44_012200 IPR030921 LPS export ABC transporter, ATP-binding protein LptB DKE44_012200 IPR003439 ABC transporter-like DKE44_012205 IPR014340 Lipopolysaccharide export system protein LptA DKE44_012205 IPR005653 Organic solvent tolerance-like, N-terminal DKE44_012220 IPR001347 Sugar isomerase (SIS) DKE44_012220 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type DKE44_012220 IPR000644 CBS domain DKE44_012220 IPR035474 KpsF-like, SIS domain DKE44_012235 IPR013762 Integrase-like, catalytic domain superfamily DKE44_012235 IPR002104 Integrase, catalytic domain DKE44_012235 IPR010998 Integrase/recombinase, N-terminal DKE44_012235 IPR011010 DNA breaking-rejoining enzyme, catalytic core DKE44_012505 IPR012156 Cold shock, CspA DKE44_012505 IPR012340 Nucleic acid-binding, OB-fold DKE44_012505 IPR019844 Cold-shock (CSD) domain DKE44_012505 IPR011129 Cold shock domain DKE44_012505 IPR002059 Cold-shock protein, DNA-binding DKE44_012540 IPR003753 Exonuclease VII, large subunit DKE44_012540 IPR025824 OB-fold nucleic acid binding domain DKE44_012540 IPR020579 Exonuclease VII, large subunit, C-terminal DKE44_012600 IPR010353 Phenol hydroxylase subunit DKE44_012605 IPR012078 Methane/phenol monooxygenase, hydroxylase component DKE44_012605 IPR003430 Methane/phenol/toluene hydroxylase DKE44_012605 IPR012348 Ribonucleotide reductase-like DKE44_012605 IPR009078 Ferritin-like superfamily DKE44_012610 IPR036889 Monooxygenase component MmoB/DmpM superfamily DKE44_012610 IPR003454 Monooxygenase component MmoB/DmpM DKE44_012640 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain DKE44_012640 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit DKE44_012640 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site DKE44_012640 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DKE44_012640 IPR017639 Benzoate 1,2-dioxygenase, large subunit DKE44_012640 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DKE44_012650 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DKE44_012650 IPR017938 Riboflavin synthase-like beta-barrel DKE44_012650 IPR017927 FAD-binding domain, ferredoxin reductase-type DKE44_012650 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DKE44_012650 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DKE44_012650 IPR001433 Oxidoreductase FAD/NAD(P)-binding DKE44_012650 IPR012675 Beta-grasp domain superfamily DKE44_012650 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DKE44_012650 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DKE44_012650 IPR036010 2Fe-2S ferredoxin-like superfamily DKE44_012685 IPR017559 Alkyl hydroperoxide reductase subunit C DKE44_012685 IPR019479 Peroxiredoxin, C-terminal DKE44_012685 IPR024706 Peroxiredoxin, AhpC-type DKE44_012685 IPR036249 Thioredoxin-like superfamily DKE44_012685 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DKE44_012685 IPR013766 Thioredoxin domain DKE44_012705 IPR012081 Alkyl hydroperoxide reductase subunit F DKE44_012705 IPR036188 FAD/NAD(P)-binding domain superfamily DKE44_012705 IPR023753 FAD/NAD(P)-binding domain DKE44_012705 IPR002109 Glutaredoxin DKE44_012705 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DKE44_012705 IPR012336 Thioredoxin-like fold DKE44_012705 IPR036249 Thioredoxin-like superfamily DKE44_012715 IPR004046 Glutathione S-transferase, C-terminal DKE44_012715 IPR010987 Glutathione S-transferase, C-terminal-like DKE44_012715 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DKE44_012715 IPR004045 Glutathione S-transferase, N-terminal DKE44_012715 IPR036249 Thioredoxin-like superfamily DKE44_012730 IPR004045 Glutathione S-transferase, N-terminal DKE44_012730 IPR004046 Glutathione S-transferase, C-terminal DKE44_012730 IPR036249 Thioredoxin-like superfamily DKE44_012730 IPR010987 Glutathione S-transferase, C-terminal-like DKE44_012730 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DKE44_012740 IPR039567 Glycine zipper domain DKE44_012740 IPR006664 Outer membrane protein, bacterial DKE44_012740 IPR006665 OmpA-like domain DKE44_012740 IPR036737 OmpA-like domain superfamily DKE44_012740 IPR006690 Outer membrane protein, OmpA-like, conserved site DKE44_012795 IPR003718 OsmC/Ohr family DKE44_012795 IPR015946 K homology domain-like, alpha/beta DKE44_012795 IPR036102 OsmC/Ohr superfamily DKE44_012800 IPR000595 Cyclic nucleotide-binding domain DKE44_012800 IPR036390 Winged helix DNA-binding domain superfamily DKE44_012800 IPR018488 Cyclic nucleotide-binding, conserved site DKE44_012800 IPR018490 Cyclic nucleotide-binding-like DKE44_012800 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_012800 IPR018335 Transcription regulator HTH, Crp-type, conserved site DKE44_012800 IPR012318 Crp-type HTH domain DKE44_012800 IPR014710 RmlC-like jelly roll fold DKE44_012825 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain DKE44_012825 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit DKE44_012825 IPR004517 ATP phosphoribosyltransferase regulatory subunit DKE44_012935 IPR006445 Phage-associated protein HI1409 DKE44_012935 IPR024459 Protein of unknown function DUF1073 DKE44_012985 IPR003751 Translational regulator CsrA DKE44_012985 IPR036107 Carbon storage regulator superfamily DKE44_013000 IPR016174 Di-haem cytochrome, transmembrane DKE44_013000 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DKE44_013005 IPR032466 Metal-dependent hydrolase DKE44_013005 IPR028892 Adenine deaminase type 2 DKE44_013005 IPR006330 Adenosine/adenine deaminase DKE44_013005 IPR001365 Adenosine/AMP deaminase domain DKE44_013025 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_013025 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_013025 IPR036291 NAD(P)-binding domain superfamily DKE44_013035 IPR003829 Pirin, N-terminal domain DKE44_013035 IPR012093 Pirin DKE44_013035 IPR014710 RmlC-like jelly roll fold DKE44_013035 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain DKE44_013035 IPR011051 RmlC-like cupin domain superfamily DKE44_013040 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DKE44_013040 IPR001647 DNA-binding HTH domain, TetR-type DKE44_013040 IPR009057 Homeobox-like domain superfamily DKE44_013040 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE44_013040 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal DKE44_013050 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_013050 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_013050 IPR036291 NAD(P)-binding domain superfamily DKE44_013055 IPR036188 FAD/NAD(P)-binding domain superfamily DKE44_013055 IPR020946 Flavin monooxygenase-like DKE44_013065 IPR009057 Homeobox-like domain superfamily DKE44_013065 IPR018060 DNA binding HTH domain, AraC-type DKE44_013065 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DKE44_013185 IPR016181 Acyl-CoA N-acyltransferase DKE44_013185 IPR017650 Arginine N-succinyltransferase DKE44_013185 IPR007041 Arginine N-succinyltransferase AstA/AruG DKE44_013210 IPR008920 Transcription regulator FadR/GntR, C-terminal DKE44_013210 IPR000524 Transcription regulator HTH, GntR DKE44_013210 IPR011711 GntR, C-terminal DKE44_013210 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_013210 IPR036390 Winged helix DNA-binding domain superfamily DKE44_013220 IPR004841 Amino acid permease/ SLC12A domain DKE44_013245 IPR008517 Protein of unknown function DUF799 DKE44_013255 IPR005534 Curli production assembly/transport component CsgG DKE44_013365 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DKE44_013365 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_013365 IPR017871 ABC transporter, conserved site DKE44_013365 IPR003593 AAA+ ATPase domain DKE44_013365 IPR003439 ABC transporter-like DKE44_013370 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_013370 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DKE44_013370 IPR035906 MetI-like superfamily DKE44_013390 IPR013520 Exonuclease, RNase T/DNA polymerase III DKE44_013390 IPR012337 Ribonuclease H-like superfamily DKE44_013390 IPR006309 DNA polymerase 3, epsilon subunit DKE44_013390 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain DKE44_013390 IPR036397 Ribonuclease H superfamily DKE44_013410 IPR014004 Transport-associated and nodulation domain, bacteria DKE44_013410 IPR007055 BON domain DKE44_013415 IPR011335 Restriction endonuclease type II-like DKE44_013415 IPR003509 Uncharacterised protein family UPF0102 DKE44_013415 IPR011856 tRNA endonuclease-like domain superfamily DKE44_013430 IPR036390 Winged helix DNA-binding domain superfamily DKE44_013430 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria DKE44_013430 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_013430 IPR017685 HTH-type transcriptional regulator ArgP DKE44_013430 IPR005119 LysR, substrate-binding DKE44_013430 IPR000847 Transcription regulator HTH, LysR DKE44_013435 IPR001123 Amino acid exporter protein, LeuE-type DKE44_013435 IPR023445 Arginine exporter protein ArgO, enterobacteria DKE44_013435 IPR004777 L-lysine exporter/arginine exporter DKE44_013530 IPR029028 Alpha/beta knot methyltransferases DKE44_013530 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKE44_013530 IPR003742 RNA methyltransferase RlmH DKE44_013545 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase DKE44_013545 IPR033524 Leu/Phe/Val dehydrogenases active site DKE44_013545 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal DKE44_013545 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain DKE44_013545 IPR014362 Glutamate dehydrogenase DKE44_013545 IPR036291 NAD(P)-binding domain superfamily DKE44_013545 IPR033922 NAD(P) binding domain of glutamate dehydrogenase DKE44_013555 IPR000445 Helix-hairpin-helix motif DKE44_013555 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DKE44_013555 IPR005759 Endonuclease III DKE44_013555 IPR004035 Endonuclease III, iron-sulphur binding site DKE44_013555 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DKE44_013555 IPR004036 Endonuclease III-like, conserved site-2 DKE44_013555 IPR003265 HhH-GPD domain DKE44_013555 IPR011257 DNA glycosylase DKE44_013605 IPR002639 Urease accessory protein UreF DKE44_013605 IPR038277 UreF domain superfamily DKE44_013610 IPR036118 UreE urease accessory, N-terminal domain superfamily DKE44_013610 IPR004029 UreE urease accessory, N-terminal DKE44_013610 IPR036675 UreE, C-terminal domain superfamily DKE44_013610 IPR007864 Urease accessory protein UreE, C-terminal domain DKE44_013610 IPR012406 Urease accessory protein UreE DKE44_013625 IPR036461 Urease, beta subunit superfamily DKE44_013625 IPR002019 Urease, beta subunit DKE44_013630 IPR012010 Urease, gamma subunit DKE44_013630 IPR002026 Urease, gamma/gamma-beta subunit DKE44_013630 IPR036463 Urease, gamma subunit superfamily DKE44_013680 IPR009000 Translation protein, beta-barrel domain superfamily DKE44_013680 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_013680 IPR000795 Transcription factor, GTP-binding domain DKE44_013680 IPR011779 Sulphate adenylyltransferase, large subunit DKE44_013680 IPR002891 Adenylyl-sulfate kinase DKE44_013680 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain DKE44_013680 IPR005225 Small GTP-binding protein domain DKE44_013680 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DKE44_013680 IPR031157 Tr-type G domain, conserved site DKE44_013695 IPR038636 Capsule assembly protein Wzi superfamily DKE44_013695 IPR026950 Capsule assembly protein Wzi DKE44_013715 IPR024935 Rubredoxin domain DKE44_013715 IPR018527 Rubredoxin, iron-binding site DKE44_013715 IPR024922 Rubredoxin DKE44_013715 IPR024934 Rubredoxin-like domain DKE44_013725 IPR000073 Alpha/beta hydrolase fold-1 DKE44_013725 IPR011942 Poly(3-hydroxyalkanoate) depolymerase DKE44_013725 IPR029058 Alpha/Beta hydrolase fold DKE44_013730 IPR005119 LysR, substrate-binding DKE44_013730 IPR000847 Transcription regulator HTH, LysR DKE44_013730 IPR036390 Winged helix DNA-binding domain superfamily DKE44_013730 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_013745 IPR001264 Glycosyl transferase, family 51 DKE44_013745 IPR023346 Lysozyme-like domain superfamily DKE44_013745 IPR036950 Penicillin binding protein transglycosylase domain DKE44_013745 IPR011812 Biosynthetic peptidoglycan transglycosylase DKE44_013750 IPR035952 Rhomboid-like superfamily DKE44_013750 IPR022764 Peptidase S54, rhomboid domain DKE44_013760 IPR003439 ABC transporter-like DKE44_013760 IPR017871 ABC transporter, conserved site DKE44_013760 IPR003593 AAA+ ATPase domain DKE44_013760 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_013765 IPR036514 SGNH hydrolase superfamily DKE44_013765 IPR013830 SGNH hydrolase-type esterase domain DKE44_013785 IPR010105 TonB-dependent siderophore receptor DKE44_013785 IPR010917 TonB-dependent receptor, conserved site DKE44_013785 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DKE44_013785 IPR000531 TonB-dependent receptor-like, beta-barrel DKE44_013785 IPR037066 TonB-dependent receptor, plug domain superfamily DKE44_013785 IPR012910 TonB-dependent receptor, plug domain DKE44_013785 IPR039426 Vitamin B12 transporter BtuB-like DKE44_013820 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DKE44_013820 IPR011780 D-serine ammonia-lyase DKE44_013820 IPR001926 Pyridoxal-phosphate dependent enzyme DKE44_013820 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DKE44_013835 IPR000489 Pterin-binding domain DKE44_013835 IPR011822 Cobalamin-dependent methionine synthase DKE44_013835 IPR033706 Methionine synthase, B12-binding domain DKE44_013835 IPR003726 Homocysteine-binding domain DKE44_013835 IPR036594 Methionine synthase domain DKE44_013835 IPR036724 Cobalamin-binding domain superfamily DKE44_013835 IPR006158 Cobalamin (vitamin B12)-binding domain DKE44_013835 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain DKE44_013835 IPR004223 Vitamin B12-dependent methionine synthase, activation domain DKE44_013835 IPR011005 Dihydropteroate synthase-like DKE44_013835 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily DKE44_013835 IPR036589 Homocysteine-binding domain superfamily DKE44_013870 IPR011051 RmlC-like cupin domain superfamily DKE44_013870 IPR013096 Cupin 2, conserved barrel DKE44_013870 IPR009057 Homeobox-like domain superfamily DKE44_013870 IPR018060 DNA binding HTH domain, AraC-type DKE44_013870 IPR018062 HTH domain AraC-type, conserved site DKE44_013870 IPR014710 RmlC-like jelly roll fold DKE44_013875 IPR036513 STAS domain superfamily DKE44_013875 IPR002645 STAS domain DKE44_013875 IPR015868 Glutaminase DKE44_013875 IPR012338 Beta-lactamase/transpeptidase-like DKE44_013880 IPR036821 Peptide deformylase superfamily DKE44_013880 IPR023635 Peptide deformylase DKE44_013895 IPR012000 Thiamine pyrophosphate enzyme, central domain DKE44_013895 IPR012846 Acetolactate synthase, large subunit, biosynthetic DKE44_013895 IPR039368 Acetolactate synthase large subunit, TPP binding domain DKE44_013895 IPR029035 DHS-like NAD/FAD-binding domain superfamily DKE44_013895 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DKE44_013895 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DKE44_013895 IPR029061 Thiamin diphosphate-binding fold DKE44_013895 IPR000399 TPP-binding enzyme, conserved site DKE44_013900 IPR016161 Aldehyde/histidinol dehydrogenase DKE44_013900 IPR015590 Aldehyde dehydrogenase domain DKE44_013900 IPR016160 Aldehyde dehydrogenase, cysteine active site DKE44_013900 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DKE44_013900 IPR016163 Aldehyde dehydrogenase, C-terminal DKE44_013900 IPR016162 Aldehyde dehydrogenase, N-terminal DKE44_013900 IPR011264 Betaine aldehyde dehydrogenase DKE44_013910 IPR036291 NAD(P)-binding domain superfamily DKE44_013910 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_013910 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_013935 IPR017626 2,3-dihydroxybiphenyl 1,2-dioxygenase DKE44_013935 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DKE44_013935 IPR037523 Vicinal oxygen chelate (VOC) domain DKE44_013935 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DKE44_013935 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II DKE44_013985 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE44_013985 IPR014748 Enoyl-CoA hydratase, C-terminal DKE44_013985 IPR001753 Enoyl-CoA hydratase/isomerase DKE44_013985 IPR022852 Carnitinyl-CoA dehydratase DKE44_013985 IPR029045 ClpP/crotonase-like domain superfamily DKE44_014005 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DKE44_014010 IPR038590 YaeQ superfamily DKE44_014010 IPR011335 Restriction endonuclease type II-like DKE44_014010 IPR009822 YaeQ DKE44_014020 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_014020 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DKE44_014020 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DKE44_014030 IPR006683 Thioesterase domain DKE44_014030 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain DKE44_014030 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase DKE44_014030 IPR029069 HotDog domain superfamily DKE44_014040 IPR018093 BCCT transporter, conserved site DKE44_014040 IPR000060 BCCT transporter family DKE44_014045 IPR000060 BCCT transporter family DKE44_014045 IPR018093 BCCT transporter, conserved site DKE44_014050 IPR001647 DNA-binding HTH domain, TetR-type DKE44_014050 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE44_014050 IPR017757 Transcriptional repressor BetI DKE44_014050 IPR009057 Homeobox-like domain superfamily DKE44_014050 IPR039538 BetI-type transcriptional repressor, C-terminal DKE44_014065 IPR006231 Malate:quinone-oxidoreductase DKE44_014065 IPR036188 FAD/NAD(P)-binding domain superfamily DKE44_014075 IPR003726 Homocysteine-binding domain DKE44_014075 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT DKE44_014075 IPR036589 Homocysteine-binding domain superfamily DKE44_014255 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKE44_014255 IPR023703 Membrane-bound lytic murein transglycosylase F DKE44_014255 IPR008258 Transglycosylase SLT domain 1 DKE44_014255 IPR023346 Lysozyme-like domain superfamily DKE44_014375 IPR015927 Peptidase S24/S26A/S26B/S26C DKE44_014375 IPR036286 LexA/Signal peptidase-like superfamily DKE44_014375 IPR039418 LexA-like DKE44_014375 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DKE44_014375 IPR001387 Cro/C1-type helix-turn-helix domain DKE44_014435 IPR036259 MFS transporter superfamily DKE44_014435 IPR020846 Major facilitator superfamily domain DKE44_014435 IPR011701 Major facilitator superfamily DKE44_014435 IPR004638 Drug resistance transporter EmrB-like DKE44_014500 IPR011078 Pyridoxal phosphate homeostasis protein DKE44_014500 IPR001608 Alanine racemase, N-terminal DKE44_014500 IPR029066 PLP-binding barrel DKE44_014505 IPR001482 Type II/IV secretion system protein DKE44_014505 IPR006321 Pilus retraction protein PilT DKE44_014505 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_014505 IPR003593 AAA+ ATPase domain DKE44_014515 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_014515 IPR002481 Ferric-uptake regulator DKE44_014515 IPR036390 Winged helix DNA-binding domain superfamily DKE44_014520 IPR007450 Lipoprotein SmpA/OmlA DKE44_014520 IPR037873 BamE-like DKE44_014520 IPR026592 Outer membrane protein assembly factor BamE DKE44_014525 IPR037021 RnfH superfamily DKE44_014525 IPR005346 RnfH protein DKE44_014525 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DKE44_014540 IPR023504 Bacteriohemerythrin-like protein DKE44_014540 IPR012312 Haemerythrin-like DKE44_014540 IPR016131 Haemerythrin, iron-binding site DKE44_014540 IPR035938 Hemerythrin-like superfamily DKE44_014540 IPR012827 Haemerythrin, metal-binding domain DKE44_014570 IPR033704 dUTPase, trimeric DKE44_014570 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase DKE44_014570 IPR036157 dUTPase-like superfamily DKE44_014570 IPR029054 dUTPase-like DKE44_014580 IPR036737 OmpA-like domain superfamily DKE44_014580 IPR039567 Glycine zipper domain DKE44_014580 IPR006664 Outer membrane protein, bacterial DKE44_014580 IPR006665 OmpA-like domain DKE44_014580 IPR006690 Outer membrane protein, OmpA-like, conserved site DKE44_014600 IPR010223 ATP binding protein MinD, bacterial-type DKE44_014600 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_014600 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DKE44_014600 IPR025501 ATP binding protein MinD DKE44_014605 IPR005527 Cell division topological specificity factor MinE DKE44_014605 IPR036707 Cell division topological specificity factor MinE superfamily DKE44_014615 IPR004778 Homoserine/Threonine efflux protein DKE44_014615 IPR001123 Amino acid exporter protein, LeuE-type DKE44_014625 IPR005982 Thioredoxin reductase DKE44_014625 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DKE44_014625 IPR036188 FAD/NAD(P)-binding domain superfamily DKE44_014625 IPR023753 FAD/NAD(P)-binding domain DKE44_014655 IPR031157 Tr-type G domain, conserved site DKE44_014655 IPR033720 Elongation factor Tu, domain 2 DKE44_014655 IPR004161 Translation elongation factor EFTu-like, domain 2 DKE44_014655 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_014655 IPR005225 Small GTP-binding protein domain DKE44_014655 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain DKE44_014655 IPR000795 Transcription factor, GTP-binding domain DKE44_014655 IPR009000 Translation protein, beta-barrel domain superfamily DKE44_014655 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DKE44_014655 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DKE44_014655 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DKE44_014660 IPR031157 Tr-type G domain, conserved site DKE44_014660 IPR041095 Elongation Factor G, domain II DKE44_014660 IPR009022 Elongation factor G, domain III DKE44_014660 IPR035647 EF-G domain III/V-like DKE44_014660 IPR035649 EFG, domain V DKE44_014660 IPR000640 Elongation factor EFG, domain V-like DKE44_014660 IPR005517 Translation elongation factor EFG/EF2, domain IV DKE44_014660 IPR004540 Translation elongation factor EFG/EF2 DKE44_014660 IPR009000 Translation protein, beta-barrel domain superfamily DKE44_014660 IPR000795 Transcription factor, GTP-binding domain DKE44_014660 IPR005225 Small GTP-binding protein domain DKE44_014660 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKE44_014660 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_014660 IPR004161 Translation elongation factor EFTu-like, domain 2 DKE44_014660 IPR020568 Ribosomal protein S5 domain 2-type fold DKE44_014680 IPR000794 Beta-ketoacyl synthase DKE44_014680 IPR018201 Beta-ketoacyl synthase, active site DKE44_014680 IPR014031 Beta-ketoacyl synthase, C-terminal DKE44_014680 IPR014030 Beta-ketoacyl synthase, N-terminal DKE44_014680 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DKE44_014680 IPR016039 Thiolase-like DKE44_014700 IPR014445 Glutamine-dependent NAD(+) synthetase DKE44_014700 IPR022310 NAD/GMP synthase DKE44_014700 IPR003694 NAD(+) synthetase DKE44_014700 IPR000132 Nitrilase/cyanide hydratase, conserved site DKE44_014700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_014700 IPR036526 Carbon-nitrogen hydrolase superfamily DKE44_014700 IPR003010 Carbon-nitrogen hydrolase DKE44_014715 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DKE44_014715 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DKE44_014715 IPR012675 Beta-grasp domain superfamily DKE44_014715 IPR039003 Carnitine monooxygenase reductase subunit DKE44_014715 IPR000951 Phthalate dioxygenase reductase DKE44_014715 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DKE44_014715 IPR001433 Oxidoreductase FAD/NAD(P)-binding DKE44_014715 IPR017938 Riboflavin synthase-like beta-barrel DKE44_014715 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DKE44_014715 IPR017927 FAD-binding domain, ferredoxin reductase-type DKE44_014715 IPR036010 2Fe-2S ferredoxin-like superfamily DKE44_014730 IPR013094 Alpha/beta hydrolase fold-3 DKE44_014730 IPR029058 Alpha/Beta hydrolase fold DKE44_014735 IPR000060 BCCT transporter family DKE44_014740 IPR011829 Tartrate dehydrogenase DKE44_014740 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DKE44_014740 IPR024084 Isopropylmalate dehydrogenase-like domain DKE44_014765 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DKE44_014765 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DKE44_014770 IPR001980 Phosphopantetheine adenylyltransferase DKE44_014770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_014770 IPR004821 Cytidyltransferase-like domain DKE44_014775 IPR010998 Integrase/recombinase, N-terminal DKE44_014775 IPR025166 Integrase, DNA-binding domain DKE44_014775 IPR038488 Integrase, DNA-binding domain superfamily DKE44_014775 IPR002104 Integrase, catalytic domain DKE44_014775 IPR013762 Integrase-like, catalytic domain superfamily DKE44_014775 IPR011010 DNA breaking-rejoining enzyme, catalytic core DKE44_015085 IPR005025 NADPH-dependent FMN reductase-like DKE44_015085 IPR029039 Flavoprotein-like superfamily DKE44_015085 IPR008254 Flavodoxin/nitric oxide synthase DKE44_015095 IPR020103 Pseudouridine synthase, catalytic domain superfamily DKE44_015095 IPR006225 Pseudouridine synthase, RluC/RluD DKE44_015095 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DKE44_015095 IPR002942 RNA-binding S4 domain DKE44_015095 IPR006145 Pseudouridine synthase, RsuA/RluA DKE44_015095 IPR036986 RNA-binding S4 domain superfamily DKE44_015100 IPR017689 Outer membrane protein assembly factor BamD DKE44_015100 IPR039565 Outer membrane lipoprotein BamD-like DKE44_015100 IPR011990 Tetratricopeptide-like helical domain superfamily DKE44_015120 IPR029046 Lipoprotein localisation LolA/LolB/LppX DKE44_015120 IPR004565 Outer membrane lipoprotein LolB DKE44_015150 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site DKE44_015150 IPR005946 Ribose-phosphate pyrophosphokinase DKE44_015150 IPR000836 Phosphoribosyltransferase domain DKE44_015150 IPR029057 Phosphoribosyltransferase-like DKE44_015150 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type DKE44_015150 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain DKE44_015155 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DKE44_015155 IPR029751 Ribosomal protein L25 DKE44_015155 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DKE44_015155 IPR020055 Ribosomal protein L25, short-form DKE44_015160 IPR001328 Peptidyl-tRNA hydrolase DKE44_015160 IPR036416 Peptidyl-tRNA hydrolase superfamily DKE44_015160 IPR018171 Peptidyl-tRNA hydrolase, conserved site DKE44_015165 IPR009010 Aspartate decarboxylase-like domain superfamily DKE44_015165 IPR003190 Aspartate decarboxylase DKE44_015195 IPR007055 BON domain DKE44_015195 IPR018392 LysM domain DKE44_015195 IPR036779 LysM domain superfamily DKE44_015195 IPR014004 Transport-associated and nodulation domain, bacteria DKE44_015200 IPR003231 Acyl carrier protein (ACP) DKE44_015200 IPR006162 Phosphopantetheine attachment site DKE44_015200 IPR036736 ACP-like superfamily DKE44_015200 IPR009081 Phosphopantetheine binding ACP domain DKE44_015205 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_015205 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_015205 IPR036291 NAD(P)-binding domain superfamily DKE44_015205 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DKE44_015215 IPR011332 Zinc-binding ribosomal protein DKE44_015215 IPR002677 Ribosomal protein L32p DKE44_015220 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DKE44_015220 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria DKE44_015230 IPR006070 YrdC-like domain DKE44_015230 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DKE44_015235 IPR003768 Segregation and condensation protein A DKE44_015240 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_015240 IPR005234 Chromosome segregation/condensation protein ScpB DKE44_015240 IPR036390 Winged helix DNA-binding domain superfamily DKE44_015245 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DKE44_015245 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DKE44_015245 IPR006145 Pseudouridine synthase, RsuA/RluA DKE44_015245 IPR002942 RNA-binding S4 domain DKE44_015245 IPR036986 RNA-binding S4 domain superfamily DKE44_015245 IPR020103 Pseudouridine synthase, catalytic domain superfamily DKE44_015245 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DKE44_015255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE44_015255 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DKE44_015260 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_015260 IPR004839 Aminotransferase, class I/classII DKE44_015260 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_015260 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DKE44_015260 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_015260 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type DKE44_015275 IPR023214 HAD superfamily DKE44_015275 IPR036412 HAD-like superfamily DKE44_015275 IPR006379 HAD-superfamily hydrolase, subfamily IIB DKE44_015275 IPR003337 Trehalose-phosphatase DKE44_015290 IPR002024 Bacterioferritin DKE44_015290 IPR009040 Ferritin-like diiron domain DKE44_015290 IPR009078 Ferritin-like superfamily DKE44_015290 IPR008331 Ferritin/DPS protein domain DKE44_015290 IPR012347 Ferritin-like DKE44_015340 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal DKE44_015340 IPR032886 tRNA-dihydrouridine(16) synthase DKE44_015340 IPR035587 DUS-like, FMN-binding domain DKE44_015340 IPR013785 Aldolase-type TIM barrel DKE44_015340 IPR001269 tRNA-dihydrouridine synthase DKE44_015340 IPR018517 tRNA-dihydrouridine synthase, conserved site DKE44_015395 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DKE44_015395 IPR034904 Fe-S cluster assembly domain superfamily DKE44_015395 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_015395 IPR000808 Mrp, conserved site DKE44_015395 IPR019591 Mrp/NBP35 ATP-binding protein DKE44_015460 IPR008910 Conserved TM helix DKE44_015490 IPR012156 Cold shock, CspA DKE44_015490 IPR011129 Cold shock domain DKE44_015490 IPR012340 Nucleic acid-binding, OB-fold DKE44_015490 IPR002059 Cold-shock protein, DNA-binding DKE44_015490 IPR019844 Cold-shock (CSD) domain DKE44_015500 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 DKE44_015500 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DKE44_015505 IPR010227 NADH-quinone oxidoreductase, chain M/4 DKE44_015505 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DKE44_015505 IPR003918 NADH:ubiquinone oxidoreductase DKE44_015510 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DKE44_015510 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup DKE44_015510 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 DKE44_015510 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal DKE44_015515 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K DKE44_015515 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DKE44_015520 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 DKE44_015520 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ DKE44_015525 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DKE44_015525 IPR010226 NADH-quinone oxidoreductase, chain I DKE44_015525 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DKE44_015530 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site DKE44_015530 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H DKE44_015545 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal DKE44_015545 IPR036249 Thioredoxin-like superfamily DKE44_015545 IPR042128 NuoE domain DKE44_015545 IPR002023 NADH-quinone oxidoreductase subunit E-like DKE44_015550 IPR010218 NADH dehydrogenase, subunit C DKE44_015550 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit DKE44_015550 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site DKE44_015550 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H DKE44_015550 IPR029014 [NiFe]-hydrogenase, large subunit DKE44_015550 IPR023062 NADH dehydrogenase, subunit CD DKE44_015550 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily DKE44_015550 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily DKE44_015550 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site DKE44_015550 IPR001135 NADH-quinone oxidoreductase, subunit D DKE44_015555 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DKE44_015555 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit DKE44_015560 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid DKE44_015560 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 DKE44_015560 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily DKE44_015580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DKE44_015580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DKE44_015580 IPR005467 Histidine kinase domain DKE44_015580 IPR003594 Histidine kinase/HSP90-like ATPase DKE44_015580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DKE44_015580 IPR003660 HAMP domain DKE44_015580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKE44_015585 IPR001789 Signal transduction response regulator, receiver domain DKE44_015585 IPR011006 CheY-like superfamily DKE44_015585 IPR001867 OmpR/PhoB-type DNA-binding domain DKE44_015585 IPR016032 Signal transduction response regulator, C-terminal effector DKE44_015585 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_015585 IPR039420 Transcriptional regulatory protein WalR-like DKE44_015605 IPR033909 Ribonucleotide reductase small subunit DKE44_015605 IPR000358 Ribonucleotide reductase small subunit family DKE44_015605 IPR012348 Ribonucleotide reductase-like DKE44_015605 IPR009078 Ferritin-like superfamily DKE44_015620 IPR019917 FMN reductase (NADH) RutF DKE44_015620 IPR012349 FMN-binding split barrel DKE44_015620 IPR002563 Flavin reductase like domain DKE44_015640 IPR005119 LysR, substrate-binding DKE44_015640 IPR036390 Winged helix DNA-binding domain superfamily DKE44_015640 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_015640 IPR000847 Transcription regulator HTH, LysR DKE44_015660 IPR036390 Winged helix DNA-binding domain superfamily DKE44_015660 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_015660 IPR000847 Transcription regulator HTH, LysR DKE44_015660 IPR005119 LysR, substrate-binding DKE44_015670 IPR036197 NarG-like superfamily DKE44_015670 IPR012830 Citrate utilization protein B DKE44_015680 IPR005829 Sugar transporter, conserved site DKE44_015680 IPR036259 MFS transporter superfamily DKE44_015680 IPR020846 Major facilitator superfamily domain DKE44_015680 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family DKE44_015680 IPR011701 Major facilitator superfamily DKE44_015715 IPR011010 DNA breaking-rejoining enzyme, catalytic core DKE44_015715 IPR013762 Integrase-like, catalytic domain superfamily DKE44_015715 IPR002104 Integrase, catalytic domain DKE44_015715 IPR010998 Integrase/recombinase, N-terminal DKE44_015715 IPR022000 Min27-like integrase, DNA-binding domain DKE44_015720 IPR012337 Ribonuclease H-like superfamily DKE44_015720 IPR013520 Exonuclease, RNase T/DNA polymerase III DKE44_015720 IPR036397 Ribonuclease H superfamily DKE44_016015 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DKE44_016015 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_016015 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DKE44_016015 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DKE44_016015 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DKE44_016015 IPR023546 Methylated-DNA--protein-cysteine methyltransferase DKE44_016015 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DKE44_016020 IPR000390 Small multidrug resistance protein family DKE44_016050 IPR000056 Ribulose-phosphate 3-epimerase-like DKE44_016050 IPR026019 Ribulose-phosphate 3-epimerase DKE44_016050 IPR013785 Aldolase-type TIM barrel DKE44_016050 IPR011060 Ribulose-phosphate binding barrel DKE44_016060 IPR014186 S-formylglutathione hydrolase DKE44_016060 IPR000801 Putative esterase DKE44_016060 IPR029058 Alpha/Beta hydrolase fold DKE44_016130 IPR001348 ATP phosphoribosyltransferase HisG DKE44_016130 IPR024893 ATP phosphoribosyltransferase HisG, short form DKE44_016130 IPR018198 ATP phosphoribosyltransferase, conserved site DKE44_016130 IPR013820 ATP phosphoribosyltransferase, catalytic domain DKE44_016135 IPR001986 Enolpyruvate transferase domain DKE44_016135 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DKE44_016135 IPR020683 Ankyrin repeat-containing domain DKE44_016135 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase DKE44_016135 IPR036968 Enolpyruvate transferase domain superfamily DKE44_016135 IPR002110 Ankyrin repeat DKE44_016140 IPR036065 BolA-like superfamily DKE44_016140 IPR002634 BolA protein DKE44_016145 IPR036567 Ribosome hibernation promotion factor-like DKE44_016145 IPR003489 Ribosome hibernation promoting factor/RaiA DKE44_016195 IPR036526 Carbon-nitrogen hydrolase superfamily DKE44_016195 IPR001110 Uncharacterised protein family UPF0012, conserved site DKE44_016195 IPR003010 Carbon-nitrogen hydrolase DKE44_016250 IPR003425 CCB3/YggT DKE44_016265 IPR001095 Acetyl-CoA carboxylase, alpha subunit DKE44_016265 IPR029045 ClpP/crotonase-like domain superfamily DKE44_016265 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal DKE44_016275 IPR005746 Thioredoxin DKE44_016275 IPR013766 Thioredoxin domain DKE44_016275 IPR017937 Thioredoxin, conserved site DKE44_016275 IPR036249 Thioredoxin-like superfamily DKE44_016295 IPR020816 Histone-like DNA-binding protein, conserved site DKE44_016295 IPR000119 Histone-like DNA-binding protein DKE44_016295 IPR005684 Integration host factor, alpha subunit DKE44_016295 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DKE44_016305 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DKE44_016305 IPR002319 Phenylalanyl-tRNA synthetase DKE44_016305 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial DKE44_016305 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal DKE44_016305 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit DKE44_016305 IPR006195 Aminoacyl-tRNA synthetase, class II DKE44_016335 IPR020846 Major facilitator superfamily domain DKE44_016335 IPR004751 Drug antiporter protein DKE44_016335 IPR036259 MFS transporter superfamily DKE44_016335 IPR011701 Major facilitator superfamily DKE44_016345 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DKE44_016345 IPR036249 Thioredoxin-like superfamily DKE44_016345 IPR010987 Glutathione S-transferase, C-terminal-like DKE44_016345 IPR004046 Glutathione S-transferase, C-terminal DKE44_016345 IPR004045 Glutathione S-transferase, N-terminal DKE44_016365 IPR006839 Ribosome-associated, YjgA DKE44_016365 IPR023153 PSPTO4464-like domain superfamily DKE44_016370 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DKE44_016370 IPR035895 HPr-like superfamily DKE44_016370 IPR000032 Phosphocarrier protein HPr-like DKE44_016370 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DKE44_016380 IPR004821 Cytidyltransferase-like domain DKE44_016380 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain DKE44_016380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_016380 IPR003721 Pantoate-beta-alanine ligase DKE44_016385 IPR003700 Ketopantoate hydroxymethyltransferase DKE44_016385 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DKE44_016385 IPR040442 Pyruvate kinase-like domain superfamily DKE44_016405 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DKE44_016405 IPR011551 NTP pyrophosphohydrolase MazG DKE44_016410 IPR036291 NAD(P)-binding domain superfamily DKE44_016410 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_016410 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_016430 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DKE44_016430 IPR005858 Cysteine synthase CysM DKE44_016430 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site DKE44_016430 IPR001926 Pyridoxal-phosphate dependent enzyme DKE44_016430 IPR005856 Cysteine synthase DKE44_016455 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DKE44_016470 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal DKE44_016480 IPR000620 EamA domain DKE44_016525 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_016525 IPR001845 HTH ArsR-type DNA-binding domain DKE44_016525 IPR011991 ArsR-like helix-turn-helix domain DKE44_016525 IPR036390 Winged helix DNA-binding domain superfamily DKE44_016550 IPR007167 Ferrous iron transporter FeoA domain DKE44_016550 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_016550 IPR030389 FeoB-type guanine nucleotide-binding (G) domain DKE44_016550 IPR041069 FeoB, cytosolic helical domain DKE44_016550 IPR038157 Ferrous iron transporter, core domain DKE44_016550 IPR011640 Ferrous iron transport protein B, C-terminal DKE44_016550 IPR003373 Ferrous iron transport protein B DKE44_016550 IPR006073 GTP binding domain DKE44_016550 IPR008988 Transcriptional repressor, C-terminal DKE44_016550 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain DKE44_016550 IPR005225 Small GTP-binding protein domain DKE44_016570 IPR001036 Acriflavin resistance protein DKE44_016570 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA DKE44_016570 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DKE44_016615 IPR007029 YHS domain DKE44_016615 IPR011017 TRASH domain DKE44_016615 IPR012348 Ribonucleotide reductase-like DKE44_016615 IPR018303 P-type ATPase, phosphorylation site DKE44_016615 IPR001757 P-type ATPase DKE44_016615 IPR027256 P-type ATPase, subfamily IB DKE44_016615 IPR023214 HAD superfamily DKE44_016615 IPR036412 HAD-like superfamily DKE44_016615 IPR023298 P-type ATPase, transmembrane domain superfamily DKE44_016615 IPR023299 P-type ATPase, cytoplasmic domain N DKE44_016615 IPR008250 P-type ATPase, A domain superfamily DKE44_016700 IPR035587 DUS-like, FMN-binding domain DKE44_016700 IPR018517 tRNA-dihydrouridine synthase, conserved site DKE44_016700 IPR001269 tRNA-dihydrouridine synthase DKE44_016700 IPR004653 tRNA-dihydrouridine(20/20a) synthase DKE44_016700 IPR013785 Aldolase-type TIM barrel DKE44_016775 IPR036291 NAD(P)-binding domain superfamily DKE44_016775 IPR014359 Ketol-acid reductoisomerase, prokaryotic DKE44_016775 IPR013116 Ketol-acid reductoisomerase, N-terminal DKE44_016775 IPR000506 Ketol-acid reductoisomerase, C-terminal DKE44_016775 IPR013023 Ketol-acid reductoisomerase DKE44_016775 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DKE44_016780 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DKE44_016780 IPR019455 Acetolactate synthase, small subunit, C-terminal DKE44_016780 IPR002912 ACT domain DKE44_016780 IPR004789 Acetolactate synthase, small subunit DKE44_016780 IPR039557 AHAS, ACT domain DKE44_016795 IPR002300 Aminoacyl-tRNA synthetase, class Ia DKE44_016795 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DKE44_016795 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DKE44_016795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_016795 IPR015413 Methionyl/Leucyl tRNA synthetase DKE44_016795 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DKE44_016795 IPR002302 Leucine-tRNA ligase DKE44_016795 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE44_016795 IPR025709 Leucyl-tRNA synthetase, editing domain DKE44_016800 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DKE44_016800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_016800 IPR015413 Methionyl/Leucyl tRNA synthetase DKE44_016800 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DKE44_016800 IPR025709 Leucyl-tRNA synthetase, editing domain DKE44_016800 IPR002302 Leucine-tRNA ligase DKE44_016800 IPR002300 Aminoacyl-tRNA synthetase, class Ia DKE44_016800 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE44_016800 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DKE44_016805 IPR025709 Leucyl-tRNA synthetase, editing domain DKE44_016805 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE44_016805 IPR002300 Aminoacyl-tRNA synthetase, class Ia DKE44_016805 IPR002302 Leucine-tRNA ligase DKE44_016805 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DKE44_016805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_016805 IPR015413 Methionyl/Leucyl tRNA synthetase DKE44_016805 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DKE44_016805 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DKE44_016865 IPR002109 Glutaredoxin DKE44_016865 IPR011767 Glutaredoxin active site DKE44_016865 IPR036249 Thioredoxin-like superfamily DKE44_016865 IPR011900 Glutaredoxin, GrxC DKE44_016865 IPR014025 Glutaredoxin subgroup DKE44_016870 IPR003708 Bacterial protein export chaperone SecB DKE44_016870 IPR035958 SecB-like superfamily DKE44_016885 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DKE44_016885 IPR002372 Pyrrolo-quinoline quinone repeat DKE44_016885 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DKE44_016885 IPR017687 Outer membrane protein assembly factor BamB DKE44_016885 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DKE44_016900 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial DKE44_016900 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type DKE44_016900 IPR011005 Dihydropteroate synthase-like DKE44_016920 IPR023005 Nucleoside diphosphate kinase, active site DKE44_016920 IPR001564 Nucleoside diphosphate kinase DKE44_016920 IPR036850 Nucleoside diphosphate kinase-like domain superfamily DKE44_016920 IPR034907 Nucleoside diphosphate kinase-like domain DKE44_016925 IPR007479 ISC system FeS cluster assembly, IscX DKE44_016925 IPR036762 IscX-like superfamily DKE44_016995 IPR023865 Aliphatic acid kinase, short-chain, conserved site DKE44_016995 IPR004372 Acetate/propionate kinase DKE44_016995 IPR000890 Aliphatic acid kinase, short-chain DKE44_017000 IPR010766 DRTGG DKE44_017000 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DKE44_017000 IPR002505 Phosphate acetyl/butaryl transferase DKE44_017000 IPR042112 Phosphate acetyltransferase, domain 2 DKE44_017000 IPR042113 Phosphate acetyltransferase, domain 1 DKE44_017000 IPR004614 Phosphate acetyltransferase DKE44_017000 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_017000 IPR016475 Phosphate acetyltransferase, bacteria DKE44_017025 IPR018215 ClpP, Ser active site DKE44_017025 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DKE44_017025 IPR001907 ATP-dependent Clp protease proteolytic subunit DKE44_017025 IPR033135 ClpP, histidine active site DKE44_017025 IPR029045 ClpP/crotonase-like domain superfamily DKE44_017075 IPR003369 Sec-independent protein translocase protein TatA/B/E DKE44_017075 IPR006312 Sec-independent protein translocase protein TatA/E DKE44_017115 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain DKE44_017115 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily DKE44_017115 IPR000398 Thymidylate synthase DKE44_017115 IPR020940 Thymidylate synthase, active site DKE44_017120 IPR012259 Dihydrofolate reductase DKE44_017120 IPR001796 Dihydrofolate reductase domain DKE44_017120 IPR017925 Dihydrofolate reductase conserved site DKE44_017120 IPR024072 Dihydrofolate reductase-like domain superfamily DKE44_017135 IPR002569 Peptide methionine sulphoxide reductase MsrA DKE44_017135 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily DKE44_017145 IPR002898 MotA/TolQ/ExbB proton channel DKE44_017170 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DKE44_017170 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent DKE44_017170 IPR016162 Aldehyde dehydrogenase, N-terminal DKE44_017170 IPR015590 Aldehyde dehydrogenase domain DKE44_017170 IPR016161 Aldehyde/histidinol dehydrogenase DKE44_017170 IPR016163 Aldehyde dehydrogenase, C-terminal DKE44_017225 IPR000380 DNA topoisomerase, type IA DKE44_017225 IPR023406 DNA topoisomerase, type IA, active site DKE44_017225 IPR023405 DNA topoisomerase, type IA, core domain DKE44_017225 IPR005733 DNA topoisomerase I, bacterial-type DKE44_017225 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DKE44_017225 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DKE44_017225 IPR003602 DNA topoisomerase, type IA, DNA-binding domain DKE44_017225 IPR028612 DNA topoisomerase I, type IA DKE44_017225 IPR006171 TOPRIM domain DKE44_017225 IPR034149 DNA topoisomerase 1, TOPRIM domain DKE44_017225 IPR003601 DNA topoisomerase, type IA, domain 2 DKE44_017225 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DKE44_017225 IPR013497 DNA topoisomerase, type IA, central DKE44_017225 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type DKE44_017225 IPR013498 DNA topoisomerase, type IA, zn finger DKE44_017235 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_017235 IPR002577 Helix-turn-helix, HxlR type DKE44_017235 IPR036390 Winged helix DNA-binding domain superfamily DKE44_017240 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site DKE44_017240 IPR013149 Alcohol dehydrogenase, C-terminal DKE44_017240 IPR013154 Alcohol dehydrogenase, N-terminal DKE44_017240 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 DKE44_017240 IPR011032 GroES-like superfamily DKE44_017240 IPR036291 NAD(P)-binding domain superfamily DKE44_017240 IPR020843 Polyketide synthase, enoylreductase domain DKE44_017260 IPR001123 Amino acid exporter protein, LeuE-type DKE44_017260 IPR004778 Homoserine/Threonine efflux protein DKE44_017285 IPR000534 Semialdehyde dehydrogenase, NAD-binding DKE44_017285 IPR012280 Semialdehyde dehydrogenase, dimerisation domain DKE44_017285 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type DKE44_017285 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site DKE44_017285 IPR036291 NAD(P)-binding domain superfamily DKE44_017285 IPR012080 Aspartate-semialdehyde dehydrogenase DKE44_017305 IPR020095 Pseudouridine synthase I, TruA, C-terminal DKE44_017305 IPR020103 Pseudouridine synthase, catalytic domain superfamily DKE44_017305 IPR001406 Pseudouridine synthase I, TruA DKE44_017305 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain DKE44_017315 IPR004368 Translation initiation factor IF-1 DKE44_017315 IPR022967 RNA-binding domain, S1 DKE44_017315 IPR006196 RNA-binding domain, S1, IF1 type DKE44_017315 IPR012340 Nucleic acid-binding, OB-fold DKE44_017330 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DKE44_017330 IPR024084 Isopropylmalate dehydrogenase-like domain DKE44_017330 IPR004429 Isopropylmalate dehydrogenase DKE44_017395 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE44_017395 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D DKE44_017395 IPR001279 Metallo-beta-lactamase DKE44_017415 IPR040079 Glutathione Transferase family DKE44_017415 IPR004045 Glutathione S-transferase, N-terminal DKE44_017415 IPR036249 Thioredoxin-like superfamily DKE44_017415 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DKE44_017415 IPR010987 Glutathione S-transferase, C-terminal-like DKE44_017420 IPR026881 WYL domain DKE44_017420 IPR036390 Winged helix DNA-binding domain superfamily DKE44_017420 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_017420 IPR028349 Protein PafC DKE44_017420 IPR013196 Helix-turn-helix, type 11 DKE44_017420 IPR001034 DeoR-type HTH domain DKE44_017430 IPR020103 Pseudouridine synthase, catalytic domain superfamily DKE44_017430 IPR006225 Pseudouridine synthase, RluC/RluD DKE44_017430 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DKE44_017430 IPR006145 Pseudouridine synthase, RsuA/RluA DKE44_017430 IPR036986 RNA-binding S4 domain superfamily DKE44_017430 IPR002942 RNA-binding S4 domain DKE44_017465 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_017465 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_017465 IPR036291 NAD(P)-binding domain superfamily DKE44_017465 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DKE44_017470 IPR006638 Elp3/MiaB/NifB DKE44_017470 IPR010723 HemN, C-terminal DKE44_017470 IPR034505 Anaerobic coproporphyrinogen-III oxidase DKE44_017470 IPR007197 Radical SAM DKE44_017470 IPR004559 Heme chaperone HemW-like DKE44_017470 IPR023404 Radical SAM, alpha/beta horseshoe DKE44_017485 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DKE44_017485 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DKE44_017485 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DKE44_017485 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DKE44_017485 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DKE44_017485 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DKE44_017500 IPR002150 Ribosomal protein L31 DKE44_017500 IPR027493 Ribosomal protein L31 type B DKE44_017500 IPR042105 Ribosomal protein L31 superfamily DKE44_017500 IPR034704 L28p-like DKE44_017510 IPR003691 Putative fluoride ion transporter CrcB DKE44_017530 IPR005584 DNA gyrase inhibitor YacG DKE44_017530 IPR013088 Zinc finger, NHR/GATA-type DKE44_017535 IPR001279 Metallo-beta-lactamase DKE44_017535 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKE44_017575 IPR036318 FAD-binding, type PCMH-like superfamily DKE44_017575 IPR016169 FAD-binding, type PCMH, subdomain 2 DKE44_017575 IPR000644 CBS domain DKE44_017575 IPR005170 Transporter-associated domain DKE44_017580 IPR004563 Apolipoprotein N-acyltransferase DKE44_017580 IPR036526 Carbon-nitrogen hydrolase superfamily DKE44_017580 IPR003010 Carbon-nitrogen hydrolase DKE44_017620 IPR000397 Heat shock protein Hsp33 DKE44_017620 IPR016154 Heat shock protein Hsp33, C-terminal DKE44_017620 IPR016153 Heat shock protein Hsp33, N-terminal DKE44_017620 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DKE44_017635 IPR022835 Chaperone modulatory protein CbpM DKE44_017650 IPR009068 S15/NS1, RNA-binding DKE44_017650 IPR005290 Ribosomal protein S15, bacterial-type DKE44_017650 IPR000589 Ribosomal protein S15 DKE44_017695 IPR023576 UbiE/COQ5 methyltransferase, conserved site DKE44_017695 IPR004033 UbiE/COQ5 methyltransferase DKE44_017695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE44_017705 IPR011009 Protein kinase-like domain superfamily DKE44_017705 IPR010232 Probable protein kinase UbiB DKE44_017705 IPR004147 UbiB domain DKE44_017710 IPR002938 FAD-binding domain DKE44_017710 IPR036188 FAD/NAD(P)-binding domain superfamily DKE44_017745 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DKE44_017745 IPR004775 Na(+)/H(+) antiporter subunit D1 DKE44_017755 IPR007208 Na(+)/H(+) antiporter subunit F-like DKE44_017775 IPR013735 Transcription factor NusA, N-terminal DKE44_017775 IPR015946 K homology domain-like, alpha/beta DKE44_017775 IPR025249 KH domain, NusA-like DKE44_017775 IPR009019 K homology domain superfamily, prokaryotic type DKE44_017775 IPR012340 Nucleic acid-binding, OB-fold DKE44_017775 IPR010213 Transcription termination factor NusA DKE44_017775 IPR030842 Transcription termination/antitermination protein NusA, bacterial DKE44_017775 IPR036555 NusA, N-terminal domain superfamily DKE44_017775 IPR022967 RNA-binding domain, S1 DKE44_017775 IPR003029 S1 domain DKE44_017775 IPR010214 Transcription termination factor NusA, C-terminal duplication DKE44_017775 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical DKE44_017800 IPR004692 Preprotein translocase SecG subunit DKE44_017835 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKE44_017835 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DKE44_017835 IPR029028 Alpha/beta knot methyltransferases DKE44_017835 IPR029064 50S ribosomal protein L30e-like DKE44_017835 IPR004441 RNA methyltransferase TrmH family DKE44_017835 IPR001537 tRNA/rRNA methyltransferase, SpoU type DKE44_017835 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DKE44_017850 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_017850 IPR003395 RecF/RecN/SMC, N-terminal DKE44_017850 IPR004604 DNA recombination/repair protein RecN DKE44_017855 IPR003774 Protein of unknown function UPF0301 DKE44_017860 IPR012337 Ribonuclease H-like superfamily DKE44_017860 IPR005227 Putative pre-16S rRNA nuclease DKE44_017860 IPR006641 YqgF/RNase H-like domain DKE44_017860 IPR037027 YqgF/RNase H-like domain superfamily DKE44_017890 IPR016221 Bifunctional regulatory protein Ada DKE44_017890 IPR018062 HTH domain AraC-type, conserved site DKE44_017890 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DKE44_017890 IPR018060 DNA binding HTH domain, AraC-type DKE44_017890 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_017890 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DKE44_017890 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DKE44_017890 IPR004026 Ada DNA repair, metal-binding DKE44_017890 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DKE44_017890 IPR035451 Ada-like domain superfamily DKE44_017890 IPR009057 Homeobox-like domain superfamily DKE44_017890 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DKE44_017905 IPR038476 UvrC homology region 2 superfamily DKE44_017905 IPR010994 RuvA domain 2-like DKE44_017905 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DKE44_017905 IPR000305 GIY-YIG endonuclease DKE44_017905 IPR001943 UVR domain DKE44_017905 IPR035901 GIY-YIG endonuclease superfamily DKE44_017905 IPR004791 UvrABC system, subunit C DKE44_017905 IPR001162 UvrC family homology region DKE44_017905 IPR036876 UVR domain superfamily DKE44_017935 IPR020616 Thiolase, N-terminal DKE44_017935 IPR012805 Acetyl-CoA C-acyltransferase FadA DKE44_017935 IPR020613 Thiolase, conserved site DKE44_017935 IPR016039 Thiolase-like DKE44_017935 IPR002155 Thiolase DKE44_017935 IPR020617 Thiolase, C-terminal DKE44_017935 IPR020615 Thiolase, acyl-enzyme intermediate active site DKE44_017935 IPR020610 Thiolase, active site DKE44_018025 IPR000206 Ribosomal protein L7/L12 DKE44_018025 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DKE44_018025 IPR008932 Ribosomal protein L7/L12, oligomerisation DKE44_018025 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily DKE44_018025 IPR013823 Ribosomal protein L7/L12, C-terminal DKE44_018030 IPR022973 Ribosomal protein L10 DKE44_018030 IPR002363 Ribosomal protein L10, eubacterial, conserved site DKE44_018030 IPR001790 Ribosomal protein L10P DKE44_018035 IPR005878 Ribosomal protein L1, bacterial-type DKE44_018035 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DKE44_018035 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DKE44_018035 IPR023674 Ribosomal protein L1-like DKE44_018035 IPR002143 Ribosomal protein L1 DKE44_018035 IPR023673 Ribosomal protein L1, conserved site DKE44_018040 IPR020784 Ribosomal protein L11, N-terminal DKE44_018040 IPR020785 Ribosomal protein L11, conserved site DKE44_018040 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DKE44_018040 IPR020783 Ribosomal protein L11, C-terminal DKE44_018040 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DKE44_018040 IPR000911 Ribosomal protein L11/L12 DKE44_018040 IPR006519 Ribosomal protein L11, bacterial-type DKE44_018045 IPR008991 Translation protein SH3-like domain superfamily DKE44_018045 IPR036735 NusG, N-terminal domain superfamily DKE44_018045 IPR005824 KOW DKE44_018045 IPR006645 NusG, N-terminal DKE44_018045 IPR001062 Transcription antitermination protein, NusG DKE44_018045 IPR014722 Ribosomal protein L2, domain 2 DKE44_018045 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DKE44_018050 IPR005807 SecE subunit of protein translocation complex, bacterial-like DKE44_018050 IPR038379 SecE superfamily DKE44_018050 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit DKE44_018060 IPR031157 Tr-type G domain, conserved site DKE44_018060 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain DKE44_018060 IPR004161 Translation elongation factor EFTu-like, domain 2 DKE44_018060 IPR033720 Elongation factor Tu, domain 2 DKE44_018060 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_018060 IPR005225 Small GTP-binding protein domain DKE44_018060 IPR000795 Transcription factor, GTP-binding domain DKE44_018060 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DKE44_018060 IPR009000 Translation protein, beta-barrel domain superfamily DKE44_018060 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DKE44_018060 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DKE44_018140 IPR022417 Porphobilinogen deaminase, N-terminal DKE44_018140 IPR022418 Porphobilinogen deaminase, C-terminal DKE44_018140 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily DKE44_018140 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site DKE44_018140 IPR000860 Porphobilinogen deaminase DKE44_018160 IPR007457 Fe(II) trafficking protein YggX DKE44_018160 IPR036766 Fe(II) trafficking protein YggX superfamily DKE44_018165 IPR038078 PhoU-like domain superfamily DKE44_018165 IPR028366 Phosphate transport system protein PhoU DKE44_018165 IPR026022 PhoU domain DKE44_018195 IPR020084 NUDIX hydrolase, conserved site DKE44_018195 IPR004385 Nucleoside diphosphate pyrophosphatase DKE44_018195 IPR015797 NUDIX hydrolase-like domain superfamily DKE44_018195 IPR000086 NUDIX hydrolase domain DKE44_018205 IPR012784 RNA polymerase-binding transcription factor DksA DKE44_018205 IPR000962 Zinc finger, DksA/TraR C4-type DKE44_018205 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DKE44_018205 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DKE44_018205 IPR037187 DksA, N-terminal domain superfamily DKE44_018215 IPR013437 Probable peptidoglycan glycosyltransferase FtsW DKE44_018215 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DKE44_018215 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site DKE44_018255 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DKE44_018255 IPR001926 Pyridoxal-phosphate dependent enzyme DKE44_018255 IPR026260 Threonine synthase, bacterial/archaeal DKE44_018255 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DKE44_018255 IPR004450 Threonine synthase-like DKE44_018260 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DKE44_018260 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DKE44_018260 IPR012338 Beta-lactamase/transpeptidase-like DKE44_018265 IPR011006 CheY-like superfamily DKE44_018265 IPR001789 Signal transduction response regulator, receiver domain DKE44_018265 IPR000792 Transcription regulator LuxR, C-terminal DKE44_018265 IPR016032 Signal transduction response regulator, C-terminal effector DKE44_018285 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily DKE44_018285 IPR006124 Metalloenzyme DKE44_018285 IPR011258 BPG-independent PGAM, N-terminal DKE44_018285 IPR017850 Alkaline-phosphatase-like, core domain superfamily DKE44_018285 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent DKE44_018290 IPR030923 LPS export ABC transporter permease LptG DKE44_018290 IPR005495 Permease LptG/LptF-related DKE44_018320 IPR017938 Riboflavin synthase-like beta-barrel DKE44_018320 IPR026017 Lumazine-binding domain DKE44_018320 IPR001783 Lumazine-binding protein DKE44_018320 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DKE44_018335 IPR003796 Ribonucleotide reductase regulator NrdR-like DKE44_018335 IPR005144 ATP-cone domain DKE44_018340 IPR018047 Ammonium transporter, conserved site DKE44_018340 IPR024041 Ammonium transporter AmtB-like domain DKE44_018340 IPR029020 Ammonium/urea transporter DKE44_018340 IPR001905 Ammonium transporter DKE44_018365 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DKE44_018365 IPR001303 Class II aldolase/adducin N-terminal DKE44_018380 IPR023614 Porin domain superfamily DKE44_018380 IPR005318 Outer membrane porin, bacterial DKE44_018385 IPR036649 Inorganic pyrophosphatase superfamily DKE44_018385 IPR008162 Inorganic pyrophosphatase DKE44_018405 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative DKE44_018405 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DKE44_018405 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DKE44_018405 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DKE44_018405 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DKE44_018405 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DKE44_018405 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat DKE44_018415 IPR005115 Uncharacterised domain UPF0126 DKE44_018420 IPR004027 SEC-C motif DKE44_018420 IPR032710 NTF2-like domain superfamily DKE44_018420 IPR023006 Uncharacterised protein family UPF0225 DKE44_018425 IPR005170 Transporter-associated domain DKE44_018425 IPR005496 Integral membrane protein TerC DKE44_018425 IPR016169 FAD-binding, type PCMH, subdomain 2 DKE44_018425 IPR036318 FAD-binding, type PCMH-like superfamily DKE44_018425 IPR000644 CBS domain DKE44_018480 IPR008254 Flavodoxin/nitric oxide synthase DKE44_018480 IPR029039 Flavoprotein-like superfamily DKE44_018480 IPR010089 Flavoprotein WrbA-like DKE44_018480 IPR005025 NADPH-dependent FMN reductase-like DKE44_018480 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic DKE44_018555 IPR036821 Peptide deformylase superfamily DKE44_018555 IPR023635 Peptide deformylase DKE44_018580 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DKE44_018580 IPR006070 YrdC-like domain DKE44_018580 IPR023535 Threonylcarbamoyl-AMP synthase DKE44_018590 IPR009057 Homeobox-like domain superfamily DKE44_018590 IPR001647 DNA-binding HTH domain, TetR-type DKE44_018590 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKE44_018615 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily DKE44_018615 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit DKE44_018615 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal DKE44_018615 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal DKE44_018625 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily DKE44_018625 IPR000131 ATP synthase, F1 complex, gamma subunit DKE44_018625 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site DKE44_018630 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DKE44_018630 IPR000793 ATP synthase, alpha subunit, C-terminal DKE44_018630 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DKE44_018630 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain DKE44_018630 IPR005294 ATP synthase, F1 complex, alpha subunit DKE44_018630 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily DKE44_018630 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DKE44_018630 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DKE44_018630 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DKE44_018630 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_018645 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast DKE44_018645 IPR035921 F/V-ATP synthase subunit C superfamily DKE44_018645 IPR038662 F1F0 ATP synthase subunit C superfamily DKE44_018645 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site DKE44_018645 IPR000454 ATP synthase, F0 complex, subunit C DKE44_018645 IPR002379 V-ATPase proteolipid subunit C-like domain DKE44_018650 IPR035908 ATP synthase, F0 complex, subunit A superfamily DKE44_018650 IPR023011 ATP synthase, F0 complex, subunit A, active site DKE44_018650 IPR000568 ATP synthase, F0 complex, subunit A DKE44_018675 IPR037294 ABC transporter, BtuC-like DKE44_018675 IPR001626 ABC transporter, TroCD-like DKE44_018685 IPR011008 Dimeric alpha-beta barrel DKE44_018685 IPR006314 Dyp-type peroxidase DKE44_018720 IPR003829 Pirin, N-terminal domain DKE44_018720 IPR008778 Pirin, C-terminal domain DKE44_018720 IPR012093 Pirin DKE44_018720 IPR011051 RmlC-like cupin domain superfamily DKE44_018720 IPR014710 RmlC-like jelly roll fold DKE44_018735 IPR016181 Acyl-CoA N-acyltransferase DKE44_018735 IPR000182 GNAT domain DKE44_018885 IPR003353 Phosphotransferase system, fructose-specific IIB subunit DKE44_018885 IPR006327 Phosphotransferase system, fructose IIC component DKE44_018885 IPR013014 Phosphotransferase system, EIIC component, type 2 DKE44_018885 IPR003352 Phosphotransferase system, EIIC DKE44_018885 IPR003501 Phosphotransferase system, EIIB component, type 2/3 DKE44_018885 IPR013011 Phosphotransferase system, EIIB component, type 2 DKE44_018885 IPR036095 PTS system IIB component-like superfamily DKE44_018895 IPR036637 Phosphohistidine domain superfamily DKE44_018895 IPR036618 PtsI, HPr-binding domain superfamily DKE44_018895 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DKE44_018895 IPR040442 Pyruvate kinase-like domain superfamily DKE44_018895 IPR016152 Phosphotransferase/anion transporter DKE44_018895 IPR023151 PEP-utilising enzyme, conserved site DKE44_018895 IPR002178 PTS EIIA type-2 domain DKE44_018895 IPR006318 Phosphotransferase system, enzyme I-like DKE44_018895 IPR000121 PEP-utilising enzyme, C-terminal DKE44_018895 IPR018274 PEP-utilising enzyme, active site DKE44_018895 IPR008279 PEP-utilising enzyme, mobile domain DKE44_018895 IPR035895 HPr-like superfamily DKE44_018895 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DKE44_018895 IPR008731 Phosphotransferase system, enzyme I N-terminal DKE44_018895 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DKE44_018895 IPR000032 Phosphocarrier protein HPr-like DKE44_018900 IPR035895 HPr-like superfamily DKE44_018900 IPR000032 Phosphocarrier protein HPr-like DKE44_018900 IPR002178 PTS EIIA type-2 domain DKE44_018900 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DKE44_018900 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DKE44_018900 IPR016152 Phosphotransferase/anion transporter DKE44_018945 IPR016181 Acyl-CoA N-acyltransferase DKE44_018945 IPR001690 Autoinducer synthase DKE44_018955 IPR014748 Enoyl-CoA hydratase, C-terminal DKE44_018955 IPR001753 Enoyl-CoA hydratase/isomerase DKE44_018955 IPR029045 ClpP/crotonase-like domain superfamily DKE44_018955 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE44_018960 IPR029045 ClpP/crotonase-like domain superfamily DKE44_018960 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DKE44_018960 IPR001753 Enoyl-CoA hydratase/isomerase DKE44_018960 IPR014748 Enoyl-CoA hydratase, C-terminal DKE44_018970 IPR042099 AMP-dependent synthetase-like superfamily DKE44_018970 IPR000873 AMP-dependent synthetase/ligase DKE44_018970 IPR020845 AMP-binding, conserved site DKE44_018970 IPR025110 AMP-binding enzyme, C-terminal domain DKE44_018975 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding DKE44_018975 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DKE44_018975 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DKE44_018975 IPR011548 3-hydroxyisobutyrate dehydrogenase DKE44_018975 IPR015815 3-hydroxyisobutyrate dehydrogenase-related DKE44_018975 IPR036291 NAD(P)-binding domain superfamily DKE44_018975 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain DKE44_018975 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site DKE44_018980 IPR016160 Aldehyde dehydrogenase, cysteine active site DKE44_018980 IPR016163 Aldehyde dehydrogenase, C-terminal DKE44_018980 IPR010061 Methylmalonate-semialdehyde dehydrogenase DKE44_018980 IPR015590 Aldehyde dehydrogenase domain DKE44_018980 IPR016161 Aldehyde/histidinol dehydrogenase DKE44_018980 IPR016162 Aldehyde dehydrogenase, N-terminal DKE44_018990 IPR004840 Amino acid permease, conserved site DKE44_018990 IPR004841 Amino acid permease/ SLC12A domain DKE44_019000 IPR006175 YjgF/YER057c/UK114 family DKE44_019000 IPR035959 RutC-like superfamily DKE44_019000 IPR019897 RidA, conserved site DKE44_019000 IPR035709 RutC family, YoaB-like DKE44_019005 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DKE44_019005 IPR000821 Alanine racemase DKE44_019005 IPR001608 Alanine racemase, N-terminal DKE44_019005 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site DKE44_019005 IPR029066 PLP-binding barrel DKE44_019005 IPR011079 Alanine racemase, C-terminal DKE44_019010 IPR036188 FAD/NAD(P)-binding domain superfamily DKE44_019010 IPR006076 FAD dependent oxidoreductase DKE44_019010 IPR023080 D-amino acid dehydrogenase DadA DKE44_019080 IPR039556 ICL/PEPM domain DKE44_019080 IPR012695 2-methylisocitrate lyase DKE44_019080 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site DKE44_019080 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DKE44_019080 IPR040442 Pyruvate kinase-like domain superfamily DKE44_019105 IPR013785 Aldolase-type TIM barrel DKE44_019105 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent DKE44_019105 IPR000262 FMN-dependent dehydrogenase DKE44_019105 IPR037396 FMN hydroxy acid dehydrogenase domain DKE44_019105 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site DKE44_019105 IPR020920 L-lactate dehydrogenase, bacterial DKE44_019110 IPR000524 Transcription regulator HTH, GntR DKE44_019110 IPR011711 GntR, C-terminal DKE44_019110 IPR008920 Transcription regulator FadR/GntR, C-terminal DKE44_019110 IPR036390 Winged helix DNA-binding domain superfamily DKE44_019110 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_019130 IPR016040 NAD(P)-binding domain DKE44_019130 IPR036291 NAD(P)-binding domain superfamily DKE44_019130 IPR005886 UDP-glucose 4-epimerase DKE44_019145 IPR005835 Nucleotidyl transferase domain DKE44_019145 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type DKE44_019145 IPR029044 Nucleotide-diphospho-sugar transferases DKE44_019190 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DKE44_019190 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DKE44_019190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DKE44_019190 IPR015424 Pyridoxal phosphate-dependent transferase DKE44_019205 IPR008894 WxcM-like, C-terminal DKE44_019205 IPR011051 RmlC-like cupin domain superfamily DKE44_019205 IPR014710 RmlC-like jelly roll fold DKE44_019210 IPR029044 Nucleotide-diphospho-sugar transferases DKE44_019210 IPR005835 Nucleotidyl transferase domain DKE44_019210 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form DKE44_019230 IPR036196 Phosphotyrosine protein phosphatase I superfamily DKE44_019230 IPR017867 Protein-tyrosine phosphatase, low molecular weight DKE44_019230 IPR023485 Phosphotyrosine protein phosphatase I DKE44_019245 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DKE44_019245 IPR008104 Macrophage infectivity potentiator DKE44_019245 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily DKE44_019245 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal DKE44_019250 IPR004268 Peptidoglycan biosynthesis protein MurJ DKE44_019275 IPR002381 Ribonuclease PH, bacterial-type DKE44_019275 IPR018336 Ribonuclease PH, conserved site DKE44_019275 IPR020568 Ribosomal protein S5 domain 2-type fold DKE44_019275 IPR027408 PNPase/RNase PH domain superfamily DKE44_019275 IPR036345 Exoribonuclease, PH domain 2 superfamily DKE44_019275 IPR015847 Exoribonuclease, phosphorolytic domain 2 DKE44_019275 IPR001247 Exoribonuclease, phosphorolytic domain 1 DKE44_019280 IPR005804 Fatty acid desaturase domain DKE44_019290 IPR001647 DNA-binding HTH domain, TetR-type DKE44_019290 IPR023764 Transcriptional repressor HTH, FabR DKE44_019290 IPR009057 Homeobox-like domain superfamily DKE44_019305 IPR010233 Ubiquinone biosynthesis O-methyltransferase DKE44_019305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKE44_019310 IPR036412 HAD-like superfamily DKE44_019310 IPR006439 HAD hydrolase, subfamily IA DKE44_019310 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic DKE44_019310 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DKE44_019310 IPR023214 HAD superfamily DKE44_019310 IPR041492 Haloacid dehalogenase-like hydrolase DKE44_019315 IPR002347 Short-chain dehydrogenase/reductase SDR DKE44_019315 IPR036291 NAD(P)-binding domain superfamily DKE44_019315 IPR020904 Short-chain dehydrogenase/reductase, conserved site DKE44_019345 IPR036661 Luciferase-like domain superfamily DKE44_019345 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent DKE44_019345 IPR011251 Luciferase-like domain DKE44_019350 IPR035906 MetI-like superfamily DKE44_019350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DKE44_019380 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain DKE44_019380 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DKE44_019380 IPR010663 Zinc finger, FPG/IleRS-type DKE44_019380 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DKE44_019380 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DKE44_019380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKE44_019380 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DKE44_019380 IPR002300 Aminoacyl-tRNA synthetase, class Ia DKE44_019380 IPR002301 Isoleucine-tRNA ligase DKE44_019380 IPR023585 Isoleucine-tRNA ligase, type 1 DKE44_019460 IPR013805 GrpE nucleotide exchange factor, coiled-coil DKE44_019460 IPR009012 GrpE nucleotide exchange factor, head DKE44_019460 IPR000740 GrpE nucleotide exchange factor DKE44_019510 IPR004101 Mur ligase, C-terminal DKE44_019510 IPR013221 Mur ligase, central DKE44_019510 IPR036565 Mur-like, catalytic domain superfamily DKE44_019510 IPR005757 Murein peptide ligase DKE44_019510 IPR000713 Mur ligase, N-terminal catalytic domain DKE44_019510 IPR036615 Mur ligase, C-terminal domain superfamily DKE44_019550 IPR000836 Phosphoribosyltransferase domain DKE44_019550 IPR005904 Hypoxanthine phosphoribosyl transferase DKE44_019550 IPR029057 Phosphoribosyltransferase-like DKE44_019585 IPR002696 Putative membrane protein insertion efficiency factor DKE44_019595 IPR020939 Ribosomal protein L34, conserved site DKE44_019595 IPR000271 Ribosomal protein L34 DKE44_019630 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DKE44_019630 IPR001387 Cro/C1-type helix-turn-helix domain DKE44_019670 IPR004604 DNA recombination/repair protein RecN DKE44_019670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_019670 IPR041685 AAA domain, group 15 DKE44_019755 IPR018448 Twin-arginine translocation protein TatB DKE44_019755 IPR003369 Sec-independent protein translocase protein TatA/B/E DKE44_019820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_019820 IPR025669 AAA domain DKE44_020010 IPR013968 Polyketide synthase, ketoreductase domain DKE44_020010 IPR018201 Beta-ketoacyl synthase, active site DKE44_020010 IPR036299 Polyketide synthase, docking domain superfmaily DKE44_020010 IPR009081 Phosphopantetheine binding ACP domain DKE44_020010 IPR006162 Phosphopantetheine attachment site DKE44_020010 IPR016039 Thiolase-like DKE44_020010 IPR014030 Beta-ketoacyl synthase, N-terminal DKE44_020010 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DKE44_020010 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DKE44_020010 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DKE44_020010 IPR020843 Polyketide synthase, enoylreductase domain DKE44_020010 IPR036291 NAD(P)-binding domain superfamily DKE44_020010 IPR001227 Acyl transferase domain superfamily DKE44_020010 IPR036736 ACP-like superfamily DKE44_020010 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DKE44_020010 IPR013154 Alcohol dehydrogenase, N-terminal DKE44_020010 IPR042104 Polyketide synthase, dehydratase domain superfamily DKE44_020010 IPR014031 Beta-ketoacyl synthase, C-terminal DKE44_020010 IPR014043 Acyl transferase DKE44_020010 IPR032821 Ketoacyl-synthetase, C-terminal extension DKE44_020010 IPR020807 Polyketide synthase, dehydratase domain DKE44_020010 IPR011032 GroES-like superfamily DKE44_020020 IPR000620 EamA domain DKE44_020045 IPR003735 Metal-sensitive transcriptional repressor DKE44_020045 IPR038390 Metal-sensitive transcriptional repressor superfamily DKE44_020140 IPR002104 Integrase, catalytic domain DKE44_020140 IPR013762 Integrase-like, catalytic domain superfamily DKE44_020140 IPR011010 DNA breaking-rejoining enzyme, catalytic core DKE44_020140 IPR023009 Tyrosine recombinase XerC/XerD DKE44_020140 IPR010998 Integrase/recombinase, N-terminal DKE44_020140 IPR004107 Integrase, SAM-like, N-terminal DKE44_020170 IPR032874 DDE domain DKE44_020170 IPR001584 Integrase, catalytic core DKE44_020170 IPR012337 Ribonuclease H-like superfamily DKE44_020170 IPR036397 Ribonuclease H superfamily DKE44_020340 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal DKE44_020340 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain DKE44_020340 IPR018449 NIL domain DKE44_020340 IPR017871 ABC transporter, conserved site DKE44_020340 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_020340 IPR003439 ABC transporter-like DKE44_020340 IPR003593 AAA+ ATPase domain DKE44_020340 IPR026253 Methionine import ATP-binding protein MetN DKE44_020500 IPR007693 DNA helicase, DnaB-like, N-terminal DKE44_020500 IPR007694 DNA helicase, DnaB-like, C-terminal DKE44_020500 IPR007692 DNA helicase, DnaB type DKE44_020500 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DKE44_020500 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKE44_020500 IPR003593 AAA+ ATPase domain DKE44_020500 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily DKE44_020600 IPR013762 Integrase-like, catalytic domain superfamily DKE44_020600 IPR010998 Integrase/recombinase, N-terminal DKE44_020600 IPR011010 DNA breaking-rejoining enzyme, catalytic core DKE44_020600 IPR002104 Integrase, catalytic domain DKE44_020635 IPR012997 Rare lipoprotein A DKE44_020635 IPR036908 RlpA-like domain superfamily DKE44_020635 IPR009009 RlpA-like protein, double-psi beta-barrel domain DKE44_020635 IPR034718 Endolytic peptidoglycan transglycosylase RlpA DKE44_020635 IPR007730 Sporulation-like domain DKE44_020675 IPR036005 Creatinase/aminopeptidase-like DKE44_020675 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DKE44_020675 IPR001714 Peptidase M24, methionine aminopeptidase DKE44_020675 IPR000994 Peptidase M24 DKE44_020700 IPR003698 Lipoyl synthase DKE44_020700 IPR006638 Elp3/MiaB/NifB DKE44_020700 IPR013785 Aldolase-type TIM barrel DKE44_020700 IPR007197 Radical SAM DKE44_020760 IPR036034 PDZ superfamily DKE44_020760 IPR009003 Peptidase S1, PA clan DKE44_020760 IPR001940 Peptidase S1C DKE44_020760 IPR001478 PDZ domain DKE44_020760 IPR011782 Peptidase S1C, Do DKE44_020770 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily DKE44_020770 IPR019831 Manganese/iron superoxide dismutase, N-terminal DKE44_020770 IPR019832 Manganese/iron superoxide dismutase, C-terminal DKE44_020770 IPR019833 Manganese/iron superoxide dismutase, binding site DKE44_020770 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily DKE44_020770 IPR001189 Manganese/iron superoxide dismutase DKE44_020830 IPR029062 Class I glutamine amidotransferase-like DKE44_020830 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain DKE44_020830 IPR017926 Glutamine amidotransferase DKE44_020850 IPR017459 Glycosyl transferase family 3, N-terminal domain DKE44_020850 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DKE44_020850 IPR005940 Anthranilate phosphoribosyl transferase DKE44_020850 IPR000312 Glycosyl transferase, family 3 DKE44_020850 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DKE44_020910 IPR038071 UROD/MetE-like superfamily DKE44_020910 IPR006361 Uroporphyrinogen decarboxylase HemE DKE44_020910 IPR000257 Uroporphyrinogen decarboxylase (URO-D) DKE44_020925 IPR003829 Pirin, N-terminal domain DKE44_020925 IPR012093 Pirin DKE44_020925 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain DKE44_020925 IPR011051 RmlC-like cupin domain superfamily DKE44_020925 IPR014710 RmlC-like jelly roll fold DKE44_020970 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DKE44_020970 IPR001126 UmuC domain DKE44_020970 IPR025188 Domain of unknown function DUF4113 DKE44_020970 IPR017961 DNA polymerase, Y-family, little finger domain DKE44_021090 IPR001460 Penicillin-binding protein, transpeptidase DKE44_021090 IPR012338 Beta-lactamase/transpeptidase-like DKE44_021165 IPR005053 MobA/MobL protein DKE44_021180 IPR022907 VapC family DKE44_021180 IPR002716 PIN domain DKE44_021180 IPR029060 PIN-like domain superfamily DKE44_021185 IPR007159 SpoVT-AbrB domain DKE44_021185 IPR037914 SpoVT-AbrB domain superfamily DKE44_021205 IPR036390 Winged helix DNA-binding domain superfamily DKE44_021205 IPR036388 Winged helix-like DNA-binding domain superfamily DKE44_021205 IPR000525 Initiator Rep protein