locus-tag	class	description
RR32_00010	COG0592	DNA-directed DNA polymerase activity
RR32_00020	COG0187	DNA topoisomerase II activity
RR32_00030	COG0586	Pfam SNARE associated Golgi protein
RR32_00035	COG0488	(ABC) transporter
RR32_00060	COG0596	Alpha beta hydrolase
RR32_00065	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
RR32_00070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
RR32_00110	COG0733	neurotransmitter:sodium symporter activity
RR32_00150	COG2233	PERMEase
RR32_00165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RR32_00200	COG2814	Major facilitator Superfamily
RR32_00205	COG0656	L-ascorbic acid biosynthetic process
RR32_00210	COG0583	DNA-binding transcription factor activity
RR32_00220	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RR32_00225	COG1064	alcohol dehydrogenase
RR32_00230	COG2818	Glycosylase
RR32_00245	COG1194	a g-specific adenine glycosylase
RR32_00260	COG5487	UPF0391 membrane protein
RR32_00265	COG2983	Belongs to the UPF0260 family
RR32_00270	COG2133	pyrroloquinoline quinone binding
RR32_00275	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
RR32_00280	COG2116	formate transmembrane transporter activity
RR32_00300	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RR32_00305	COG1335	isochorismatase
RR32_00310	COG0385	Bile acid
RR32_00315	COG0534	Mate efflux family protein
RR32_00320	COG1683	Conserved Protein
RR32_00340	COG0625	glutathione transferase activity
RR32_00350	COG1113	amino acid transport
RR32_00360	COG0523	cobalamin synthesis protein
RR32_00370	COG2188	Transcriptional regulator
RR32_00400	COG0010	Belongs to the arginase family
RR32_00415	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
RR32_00420	COG1280	lysine exporter protein (LysE YggA)
RR32_00430	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
RR32_00440	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
RR32_00445	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
RR32_00540	COG0534	Mate efflux family protein
RR32_00545	COG0436	Aminotransferase
RR32_00550	COG2733	membrane
RR32_00565	COG2918	glutathione biosynthetic process
RR32_00575	COG3501	Rhs element vgr protein
RR32_00625	COG3150	esterase
RR32_00635	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
RR32_00645	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RR32_00655	COG2233	PERMEase
RR32_00660	COG2351	hydroxyisourate hydrolase activity
RR32_00695	COG3706	GGDEF domain
RR32_00710	COG1393	Belongs to the ArsC family
RR32_00715	COG0708	Exodeoxyribonuclease III
RR32_00735	COG0189	ligase activity
RR32_00755	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
RR32_00765	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
RR32_00780	COG4942	peptidase
RR32_00790	COG0508	dehydrogenase complex catalyzes the overall conversion of
RR32_00800	COG2119	membrane
RR32_00805	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RR32_00805	COG0426	domain, Protein
RR32_00830	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
RR32_00850	COG1902	pentaerythritol trinitrate reductase activity
RR32_00860	COG1519	Transferase
RR32_00865	COG1385	rRNA (uridine-N3-)-methyltransferase activity
RR32_00870	COG0668	transmembrane transport
RR32_00880	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
RR32_00885	COG1335	isochorismatase
RR32_00890	COG1522	sequence-specific DNA binding
RR32_00915	COG0784	Response regulator, receiver
RR32_00915	COG2198	Histidine kinase
RR32_00915	COG2205	protein histidine kinase activity
RR32_00920	COG3162	membrane
RR32_00925	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RR32_00935	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
RR32_00945	COG3706	GGDEF domain
RR32_00955	COG1309	transcriptional regulator
RR32_00975	COG0352	thiamine-phosphate diphosphorylase activity
RR32_00975	COG0351	phosphomethylpyrimidine kinase
RR32_00975	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
RR32_00985	COG2814	Major facilitator Superfamily
RR32_01010	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
RR32_01020	COG1113	amino acid transport
RR32_01030	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
RR32_01035	COG1012	belongs to the aldehyde dehydrogenase family
RR32_01045	COG1335	isochorismatase
RR32_01135	COG1309	transcriptional regulator
RR32_01160	COG2814	Major facilitator Superfamily
RR32_01165	COG0583	DNA-binding transcription factor activity
RR32_01185	COG0667	Aldo Keto reductase
RR32_01230	COG1733	regulation of RNA biosynthetic process
RR32_01235	COG2249	NAD(P)H dehydrogenase (quinone) activity
RR32_01300	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
RR32_01325	COG1132	(ABC) transporter
RR32_01345	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
RR32_01375	COG0427	acetyl-CoA hydrolase
RR32_01380	COG2205	protein histidine kinase activity
RR32_01385	COG0745	RESPONSE REGULATOR receiver
RR32_01395	COG0659	secondary active sulfate transmembrane transporter activity
RR32_01400	COG4221	oxidoreductase activity
RR32_01410	COG0028	Belongs to the TPP enzyme family
RR32_01415	COG0488	(ABC) transporter
RR32_01530	COG0833	amino acid
RR32_01575	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
RR32_01580	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
RR32_01595	COG2226	methyltransferase
RR32_01645	COG0067	glutamate synthase
RR32_01645	COG0069	glutamate synthase activity
RR32_01645	COG0070	glutamate synthase
RR32_01650	COG0493	'glutamate synthase
RR32_01660	COG1704	LemA family
RR32_01665	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
RR32_01690	COG3307	-O-antigen
RR32_01710	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RR32_01720	COG0194	GDP metabolic process
RR32_01755	COG4969	Belongs to the N-Me-Phe pilin family
RR32_01770	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
RR32_01790	COG5380	lipid catabolic process
RR32_01795	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
RR32_01810	COG5006	permease, DMT superfamily
RR32_01815	COG5006	permease, DMT superfamily
RR32_01820	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RR32_01825	COG0277	FAD linked oxidase domain protein
RR32_01840	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
RR32_01845	COG2249	NAD(P)H dehydrogenase (quinone) activity
RR32_01860	COG1289	transmembrane transporter activity
RR32_01865	COG2032	superoxide dismutase activity
RR32_01870	COG0628	permease
RR32_01875	COG1192	Involved in chromosome partitioning
RR32_01905	COG0833	amino acid
RR32_01910	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
RR32_01915	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
RR32_01925	COG1012	belongs to the aldehyde dehydrogenase family
RR32_01965	COG0583	DNA-binding transcription factor activity
RR32_02010	COG0517	IMP dehydrogenase activity
RR32_02015	COG1983	PspC domain protein
RR32_02025	COG1960	acyl-CoA dehydrogenase activity
RR32_02040	COG0408	coproporphyrinogen oxidase activity
RR32_02060	COG0513	Belongs to the DEAD box helicase family
RR32_02070	COG1127	ABC transporter
RR32_02075	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
RR32_02085	COG2854	intermembrane phospholipid transfer
RR32_02095	COG0598	Magnesium transport protein CorA
RR32_02105	COG0494	nUDIX hydrolase
RR32_02110	COG1040	competence protein
RR32_02115	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
RR32_02135	COG1946	Acyl-CoA thioesterase
RR32_02140	COG1301	dicarboxylic acid transport
RR32_02155	COG1959	2 iron, 2 sulfur cluster binding
RR32_02160	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RR32_02160	COG1017	nitric oxide dioxygenase activity
RR32_02165	COG0433	COG0433 Predicted ATPase
RR32_02170	COG0626	cystathionine gamma-synthase activity
RR32_02185	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
RR32_02190	COG0088	Forms part of the polypeptide exit tunnel
RR32_02290	COG0257	Belongs to the bacterial ribosomal protein bL36 family
RR32_02300	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
RR32_02325	COG1960	acyl-CoA dehydrogenase activity
RR32_02330	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
RR32_02360	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
RR32_02365	COG0339	signal peptide processing
RR32_02370	COG0557	exoribonuclease II activity
RR32_02415	COG0179	Fumarylacetoacetate (FAA) hydrolase
RR32_02420	COG2207	Transcriptional regulator
RR32_02430	COG1295	ribonuclease BN
RR32_02465	COG1702	phosphate starvation-inducible protein PhoH
RR32_02475	COG0741	lytic transglycosylase activity
RR32_02475	COG0739	heme binding
RR32_02475	COG1196	nuclear chromosome segregation
RR32_02505	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
RR32_02510	COG1183	phosphatidylcholine synthase activity
RR32_02555	COG1960	acyl-CoA dehydrogenase activity
RR32_02560	COG1309	transcriptional regulator
RR32_02575	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
RR32_02580	COG1960	acyl-CoA dehydrogenase activity
RR32_02620	COG2969	positive regulation of protein catabolic process
RR32_02630	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RR32_02635	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
RR32_02640	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
RR32_02645	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
RR32_02650	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
RR32_02670	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
RR32_02680	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RR32_02685	COG1408	metallophosphoesterase
RR32_02695	COG2199	diguanylate cyclase activity
RR32_02740	COG3453	Protein conserved in bacteria
RR32_02740	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RR32_02755	COG1607	acyl-coa hydrolase
RR32_02790	COG2350	Protein conserved in bacteria
RR32_02800	COG0613	PHP domain protein
RR32_02805	COG3781	membrane
RR32_02815	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
RR32_02820	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
RR32_02830	COG1862	Preprotein translocase
RR32_02860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RR32_02860	COG2198	Histidine kinase
RR32_02860	COG2205	protein histidine kinase activity
RR32_02860	COG0784	Response regulator, receiver
RR32_02865	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
RR32_02880	COG0726	polysaccharide deacetylase
RR32_02885	COG0438	transferase activity, transferring glycosyl groups
RR32_02895	COG0438	transferase activity, transferring glycosyl groups
RR32_02900	COG1216	Glycosyl transferase, family 2
RR32_02900	COG0463	Glycosyl transferase, family 2
RR32_02905	COG0438	transferase activity, transferring glycosyl groups
RR32_02950	COG1960	acyl-CoA dehydrogenase activity
RR32_02955	COG1960	acyl-CoA dehydrogenase activity
RR32_02965	COG2205	protein histidine kinase activity
RR32_02970	COG0745	RESPONSE REGULATOR receiver
RR32_02975	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
RR32_02995	COG2096	Adenosyltransferase
RR32_03000	COG4206	TonB-dependent receptor
RR32_03010	COG0133	tryptophan synthase activity
RR32_03050	COG0285	dihydrofolate synthase activity
RR32_03070	COG0450	alkyl hydroperoxide reductase
RR32_03085	COG0477	Major facilitator Superfamily
RR32_03090	COG1272	protein, Hemolysin III
RR32_03100	COG2153	protein acetylation
RR32_03120	COG0183	Belongs to the thiolase family
RR32_03125	COG2207	Transcriptional regulator
RR32_03145	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RR32_03165	COG0183	Belongs to the thiolase family
RR32_03175	COG2885	chlorophyll binding
RR32_03175	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
RR32_03185	COG1690	Belongs to the RtcB family
RR32_03190	COG0833	amino acid
RR32_03200	COG2233	PERMEase
RR32_03230	COG2094	Belongs to the DNA glycosylase MPG family
RR32_03235	COG4772	TonB-dependent receptor
RR32_03240	COG1902	pentaerythritol trinitrate reductase activity
RR32_03245	COG0679	Auxin Efflux Carrier
RR32_03255	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
RR32_03260	COG0354	folic acid binding
RR32_03270	COG3189	MarR family transcriptional regulator
RR32_03275	COG2824	Alkylphosphonate utilization operon protein PhnA
RR32_03280	COG3422	double-strand break repair
RR32_03320	COG0840	transmembrane signaling receptor activity
RR32_03350	COG2832	Protein of unknown function (DUF454)
RR32_03355	COG1376	ErfK ybiS ycfS ynhG family protein
RR32_03395	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
RR32_03405	COG1289	transmembrane transporter activity
RR32_03410	COG2814	Major facilitator Superfamily
RR32_03425	COG1115	amino acid carrier protein
RR32_03430	COG1752	Esterase of the alpha-beta hydrolase superfamily
RR32_03435	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
RR32_03440	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
RR32_03470	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
RR32_03480	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
RR32_03485	COG1077	Cell shape determining protein MreB Mrl
RR32_03490	COG1792	Involved in formation and maintenance of cell shape
RR32_03495	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
RR32_03500	COG0424	maF-like protein
RR32_03505	COG1530	ribonuclease E activity
RR32_03515	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
RR32_03535	COG2249	NAD(P)H dehydrogenase (quinone) activity
RR32_03560	COG2207	Transcriptional regulator
RR32_03635	COG0305	Participates in initiation and elongation during chromosome replication
RR32_03675	COG3046	protein related to deoxyribodipyrimidine photolyase
RR32_03680	COG2816	NAD+ diphosphatase activity
RR32_03685	COG1113	amino acid transport
RR32_03695	COG0142	geranyltranstransferase activity
RR32_03700	COG2315	Protein conserved in bacteria
RR32_03715	COG1752	Esterase of the alpha-beta hydrolase superfamily
RR32_03735	COG2194	sulfuric ester hydrolase activity
RR32_03740	COG0745	RESPONSE REGULATOR receiver
RR32_03745	COG0642	Histidine kinase
RR32_03755	COG0004	ammonium transporteR
RR32_03760	COG0583	DNA-binding transcription factor activity
RR32_03780	COG0525	valine-tRNA ligase activity
RR32_03790	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_03800	COG0393	Putative heavy-metal-binding
RR32_03805	COG0393	Putative heavy-metal-binding
RR32_03810	COG1538	Outer membrane efflux protein
RR32_03820	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RR32_03825	COG0671	phosphoesterase, PA-phosphatase related
RR32_03850	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
RR32_03865	COG1648	precorrin-2 dehydrogenase activity
RR32_03865	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
RR32_03870	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
RR32_03875	COG1733	regulation of RNA biosynthetic process
RR32_03885	COG0531	amino acid
RR32_03900	COG0321	lipoyl(octanoyl) transferase activity
RR32_03905	COG2921	Belongs to the UPF0250 family
RR32_03945	COG2009	succinate dehydrogenase
RR32_03950	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
RR32_03955	COG1053	succinate dehydrogenase
RR32_03960	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
RR32_03975	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RR32_03995	COG2354	Protein conserved in bacteria
RR32_04000	COG2321	neutral zinc metallopeptidase
RR32_04020	COG2843	Capsule synthesis protein
RR32_04040	COG0589	response to stress
RR32_04050	COG0251	oxidation-reduction process
RR32_04055	COG1309	transcriptional regulator
RR32_04070	COG0505	Belongs to the CarA family
RR32_04100	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RR32_04105	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
RR32_04155	COG0477	Major facilitator Superfamily
RR32_04160	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
RR32_04180	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
RR32_04200	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RR32_04225	COG0741	lytic transglycosylase activity
RR32_04245	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
RR32_04255	COG0582	viral genome integration into host DNA
RR32_04335	COG3328	transposase activity
RR32_04380	COG2814	Major facilitator Superfamily
RR32_04390	COG1230	cation diffusion facilitator family transporter
RR32_04405	COG2015	COG2015, Alkyl sulfatase and related hydrolases
RR32_04420	COG2059	Chromate
RR32_04445	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
RR32_04455	COG3811	Belongs to the UPF0386 family
RR32_04495	COG1309	transcriptional regulator
RR32_04500	COG1902	pentaerythritol trinitrate reductase activity
RR32_04505	COG0508	dehydrogenase complex catalyzes the overall conversion of
RR32_04505	COG0596	Alpha beta hydrolase
RR32_04510	COG0508	dehydrogenase complex catalyzes the overall conversion of
RR32_04510	COG0596	Alpha beta hydrolase
RR32_04515	COG0596	Alpha beta hydrolase
RR32_04525	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RR32_04530	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RR32_04535	COG0778	Nitroreductase
RR32_04540	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_04550	COG1929	Belongs to the glycerate kinase type-1 family
RR32_04555	COG0243	molybdopterin cofactor binding
RR32_04560	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
RR32_04565	COG3339	Conserved Protein
RR32_04590	COG1113	amino acid transport
RR32_04595	COG1113	amino acid transport
RR32_04605	COG0019	diaminopimelate decarboxylase activity
RR32_04615	COG1397	ADP-ribosylglycohydrolase
RR32_04625	COG1280	lysine exporter protein (LysE YggA)
RR32_04630	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
RR32_04650	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RR32_04660	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
RR32_04670	COG0463	Glycosyl transferase, family 2
RR32_04690	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RR32_04720	COG4591	ABC-type transport system involved in lipoprotein release permease component
RR32_04725	COG1136	(ABC) transporter
RR32_04740	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
RR32_04740	COG0616	signal peptide processing
RR32_04745	COG0596	Alpha beta hydrolase
RR32_04750	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
RR32_04760	COG0628	permease
RR32_04795	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RR32_04815	COG0823	Involved in the tonB-independent uptake of proteins
RR32_04835	COG0824	Thioesterase
RR32_04840	COG1473	amidohydrolase
RR32_04860	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
RR32_04860	COG0047	phosphoribosylformylglycinamidine synthase activity
RR32_04865	COG2814	Major facilitator Superfamily
RR32_04885	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
RR32_04890	COG1024	Enoyl-CoA hydratase
RR32_04895	COG1056	cytidyltransferase-related domain
RR32_04895	COG1051	belongs to the nudix hydrolase family
RR32_04910	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
RR32_04925	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
RR32_04930	COG0602	queuosine metabolic process
RR32_04940	COG4625	pathogenesis
RR32_04945	COG0583	DNA-binding transcription factor activity
RR32_04950	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
RR32_04955	COG4208	sulfate ABC transporter
RR32_04960	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
RR32_04970	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
RR32_04975	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
RR32_04980	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
RR32_05000	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RR32_05015	COG0481	GTPase activity
RR32_05020	COG0681	Belongs to the peptidase S26 family
RR32_05035	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
RR32_05045	COG1381	Involved in DNA repair and RecF pathway recombination
RR32_05050	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
RR32_05060	COG4221	oxidoreductase activity
RR32_05105	COG0556	nucleotide-excision repair
RR32_05160	COG2070	2-Nitropropane dioxygenase
RR32_05190	COG1215	transferase activity, transferring glycosyl groups
RR32_05205	COG0415	Belongs to the DNA photolyase family
RR32_05215	COG1252	NADH dehydrogenase
RR32_05220	COG1686	Belongs to the peptidase S11 family
RR32_05235	COG1187	pseudouridine synthase activity
RR32_05250	COG0477	Major facilitator Superfamily
RR32_05255	COG0583	DNA-binding transcription factor activity
RR32_05270	COG0612	Peptidase, M16
RR32_05295	COG0352	thiamine-phosphate diphosphorylase activity
RR32_05330	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RR32_05355	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
RR32_05360	COG0076	glutamate decarboxylase activity
RR32_05370	COG1522	sequence-specific DNA binding
RR32_05375	COG3961	Belongs to the TPP enzyme family
RR32_05380	COG1113	amino acid transport
RR32_05385	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RR32_05390	COG0573	inorganic phosphate transmembrane transporter activity
RR32_05400	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
RR32_05405	COG0616	signal peptide processing
RR32_05420	COG3647	Membrane
RR32_05445	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
RR32_05450	COG1686	Belongs to the peptidase S11 family
RR32_05475	COG0583	DNA-binding transcription factor activity
RR32_05480	COG1067	ATP-dependent peptidase activity
RR32_05505	COG4943	cyclic-guanylate-specific phosphodiesterase activity
RR32_05520	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
RR32_05525	COG1966	Carbon starvation protein
RR32_05530	COG2879	small protein
RR32_05545	COG2423	ornithine cyclodeaminase activity
RR32_05555	COG2964	Protein conserved in bacteria
RR32_05560	COG1741	Belongs to the pirin family
RR32_05575	COG3739	integral membrane protein
RR32_05605	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RR32_05615	COG2840	Smr protein MutS2
RR32_05640	COG0512	Glutamine amidotransferase of anthranilate synthase
RR32_05650	COG3104	oligopeptide transport
RR32_05665	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
RR32_05700	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
RR32_05705	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
RR32_05710	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RR32_05730	COG1385	rRNA (uridine-N3-)-methyltransferase activity
RR32_05735	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
RR32_05740	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
RR32_05755	COG1960	acyl-CoA dehydrogenase activity
RR32_05760	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
RR32_05765	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RR32_05780	COG2223	nitrite transmembrane transporter activity
RR32_05790	COG0024	Methionine aminopeptidase
RR32_05795	COG0052	Belongs to the universal ribosomal protein uS2 family
RR32_05810	COG2207	Transcriptional regulator
RR32_05835	COG2951	lytic endotransglycosylase activity
RR32_05840	COG0772	Belongs to the SEDS family
RR32_05855	COG0842	Transport permease protein
RR32_05860	COG1131	(ABC) transporter
RR32_05865	COG0582	viral genome integration into host DNA
RR32_06080	COG1538	Outer membrane efflux protein
RR32_06090	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RR32_06105	COG4215	(ABC) transporter
RR32_06110	COG4160	amino acid transport
RR32_06115	COG4598	ABC transporter
RR32_06125	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
RR32_06135	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RR32_06140	COG0384	phenazine biosynthesis protein PhzF
RR32_06150	COG1720	tRNA m6t6A37 methyltransferase activity
RR32_06160	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
RR32_06165	COG3111	PFAM Bacterial OB fold (BOF) protein
RR32_06170	COG0745	RESPONSE REGULATOR receiver
RR32_06175	COG0642	Histidine kinase
RR32_06185	COG0494	nUDIX hydrolase
RR32_06195	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
RR32_06200	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
RR32_06205	COG3139	Protein of unknown function (DUF1315)
RR32_06210	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
RR32_06215	COG1301	dicarboxylic acid transport
RR32_06220	COG1960	acyl-CoA dehydrogenase activity
RR32_06230	COG2819	hydrolase of the alpha beta superfamily
RR32_06240	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
RR32_06265	COG1262	PFAM Formylglycine-generating sulfatase enzyme
RR32_06270	COG2195	Cleaves the N-terminal amino acid of tripeptides
RR32_06275	COG1234	tRNA 3'-trailer cleavage
RR32_06305	COG2363	Small membrane protein
RR32_06325	COG0513	Belongs to the DEAD box helicase family
RR32_06335	COG0778	Nitroreductase
RR32_06365	COG1286	toxin biosynthetic process
RR32_06390	COG4783	chaperone-mediated protein folding
RR32_06395	COG1610	YqeY-like protein
RR32_06400	COG0828	Belongs to the bacterial ribosomal protein bS21 family
RR32_06425	COG0515	serine threonine protein kinase
RR32_06425	COG2815	serine threonine protein kinase
RR32_06450	COG2831	hemolysin activation secretion protein
RR32_06520	COG2226	methyltransferase
RR32_06530	COG3111	PFAM Bacterial OB fold (BOF) protein
RR32_06545	COG3243	poly(R)-hydroxyalkanoic acid synthase
RR32_06550	COG0786	glutamate:sodium symporter activity
RR32_06555	COG0475	glutathione-regulated potassium exporter activity
RR32_06555	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RR32_06560	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_06640	COG2169	Transcriptional regulator
RR32_06640	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RR32_06655	COG2985	domain, Protein
RR32_06670	COG0583	DNA-binding transcription factor activity
RR32_06680	COG2995	paraquat-inducible protein a
RR32_06685	COG3008	intermembrane lipid transfer
RR32_06685	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
RR32_06695	COG2351	hydroxyisourate hydrolase activity
RR32_06710	COG5002	protein histidine kinase activity
RR32_06735	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RR32_06745	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RR32_06750	COG0642	Histidine kinase
RR32_06755	COG0745	RESPONSE REGULATOR receiver
RR32_06775	COG1794	racemase activity, acting on amino acids and derivatives
RR32_06790	COG2175	clavaminate synthase activity
RR32_06795	COG3246	L-lysine catabolic process to acetate
RR32_06800	COG2814	Major facilitator Superfamily
RR32_06815	COG2855	membrane
RR32_06860	COG1301	dicarboxylic acid transport
RR32_06870	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RR32_06875	COG2011	ABC-type metal ion transport system permease component
RR32_06880	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
RR32_06895	COG0151	Belongs to the GarS family
RR32_06900	COG0138	bifunctional purine biosynthesis protein purh
RR32_06905	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
RR32_06935	COG2308	Evidence 4 Homologs of previously reported genes of
RR32_06945	COG1305	Transglutaminase-like
RR32_06955	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
RR32_06960	COG0305	Participates in initiation and elongation during chromosome replication
RR32_06985	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
RR32_06995	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
RR32_07025	COG1649	PFAM Uncharacterised BCR, COG1649
RR32_07025	COG0726	polysaccharide deacetylase
RR32_07030	COG1215	transferase activity, transferring glycosyl groups
RR32_07035	COG3658	cytochrome
RR32_07045	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RR32_07060	COG3328	transposase activity
RR32_07075	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RR32_07080	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RR32_07105	COG1960	acyl-CoA dehydrogenase activity
RR32_07110	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
RR32_07115	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RR32_07140	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
RR32_07145	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
RR32_07155	COG2205	protein histidine kinase activity
RR32_07160	COG0745	RESPONSE REGULATOR receiver
RR32_07165	COG0174	glutamine synthetase
RR32_07185	COG0729	surface antigen
RR32_07215	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RR32_07220	COG2814	Major facilitator Superfamily
RR32_07230	COG0583	DNA-binding transcription factor activity
RR32_07245	COG1187	pseudouridine synthase activity
RR32_07265	COG0802	atpase or kinase
RR32_07270	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
RR32_07280	COG1923	regulation of RNA biosynthetic process
RR32_07285	COG0697	spore germination
RR32_07315	COG0518	GMP synthase (glutamine-hydrolyzing) activity
RR32_07315	COG0519	Catalyzes the synthesis of GMP from XMP
RR32_07320	COG4302	ethanolamine ammonia-lyase activity
RR32_07325	COG4303	Ethanolamine ammonia lyase large subunit
RR32_07330	COG0531	amino acid
RR32_07350	COG1454	alcohol dehydrogenase
RR32_07355	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RR32_07365	COG3708	Transcriptional regulator
RR32_07365	COG2207	Transcriptional regulator
RR32_07385	COG0308	aminopeptidase N
RR32_07410	COG0625	glutathione transferase activity
RR32_07425	COG1605	Chorismate mutase
RR32_07465	COG4264	IucA IucC family
RR32_07475	COG4264	IucA IucC family
RR32_07480	COG2423	ornithine cyclodeaminase activity
RR32_07485	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
RR32_07490	COG0668	transmembrane transport
RR32_07535	COG0488	(ABC) transporter
RR32_07540	COG0589	response to stress
RR32_07570	COG3135	benzoate transporter
RR32_07575	COG1522	sequence-specific DNA binding
RR32_07590	COG0583	DNA-binding transcription factor activity
RR32_07600	COG0183	Belongs to the thiolase family
RR32_07640	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
RR32_07650	COG0824	Thioesterase
RR32_07655	COG1454	alcohol dehydrogenase
RR32_07665	COG1335	isochorismatase
RR32_07680	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
RR32_07710	COG0069	glutamate synthase activity
RR32_07740	COG2814	Major facilitator Superfamily
RR32_07750	COG0439	Biotin carboxylase
RR32_07755	COG0511	ligase activity, forming carbon-carbon bonds
RR32_07770	COG1116	anion transmembrane transporter activity
RR32_07770	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RR32_07775	COG0745	RESPONSE REGULATOR receiver
RR32_07785	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RR32_07785	COG2146	nitrite reductase [NAD(P)H] activity
RR32_07790	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RR32_07795	COG0243	molybdopterin cofactor binding
RR32_07805	COG0243	molybdopterin cofactor binding
RR32_07810	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
RR32_07825	COG0315	cyclic pyranopterin monophosphate synthase activity
RR32_07825	COG0521	Mo-molybdopterin cofactor biosynthetic process
RR32_07830	COG0303	'Molybdopterin
RR32_07840	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RR32_07845	COG0697	spore germination
RR32_07865	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
RR32_07870	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
RR32_07925	COG2204	response regulator
RR32_07930	COG3852	Histidine kinase
RR32_07950	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
RR32_07955	COG0575	Belongs to the CDS family
RR32_07990	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RR32_08000	COG2137	regulation of response to DNA damage stimulus
RR32_08010	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
RR32_08015	COG1011	Hydrolase
RR32_08035	COG1522	sequence-specific DNA binding
RR32_08045	COG1113	amino acid transport
RR32_08060	COG0659	secondary active sulfate transmembrane transporter activity
RR32_08065	COG3328	transposase activity
RR32_08085	COG3300	MHYT domain
RR32_08085	COG5001	Diguanylate cyclase
RR32_08100	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RR32_08100	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
RR32_08100	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RR32_08105	COG1105	Belongs to the carbohydrate kinase PfkB family
RR32_08110	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
RR32_08110	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RR32_08140	COG0024	Methionine aminopeptidase
RR32_08145	COG0583	DNA-binding transcription factor activity
RR32_08155	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
RR32_08160	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
RR32_08165	COG0517	IMP dehydrogenase activity
RR32_08165	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
RR32_08190	COG0552	protein localization to endoplasmic reticulum
RR32_08200	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
RR32_08215	COG4890	Cyd operon protein YbgT
RR32_08220	COG1294	oxidase, subunit
RR32_08235	COG1585	Membrane protein implicated in regulation of membrane protease activity
RR32_08245	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RR32_08250	COG4774	siderophore transport
RR32_08265	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
RR32_08270	COG0569	domain protein
RR32_08275	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
RR32_08305	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
RR32_08310	COG0542	response to heat
RR32_08320	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
RR32_08335	COG1902	pentaerythritol trinitrate reductase activity
RR32_08335	COG0446	pyridine nucleotide-disulphide oxidoreductase
RR32_08375	COG2323	membrane
RR32_08385	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
RR32_08395	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
RR32_08400	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
RR32_08405	COG0183	Belongs to the thiolase family
RR32_08410	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
RR32_08415	COG0596	Alpha beta hydrolase
RR32_08420	COG2271	Major facilitator Superfamily
RR32_08425	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RR32_08430	COG3485	protocatechuate 3,4-dioxygenase
RR32_08435	COG3485	protocatechuate 3,4-dioxygenase
RR32_08440	COG0710	3-dehydroquinate dehydratase activity
RR32_08445	COG3420	alginic acid biosynthetic process
RR32_08450	COG3659	wide pore channel activity
RR32_08455	COG4993	Dehydrogenase
RR32_08465	COG2391	methyltransferase activity
RR32_08480	COG1414	Transcriptional regulator
RR32_08485	COG0583	DNA-binding transcription factor activity
RR32_08490	COG1960	acyl-CoA dehydrogenase activity
RR32_08515	COG2814	Major facilitator Superfamily
RR32_08525	COG0154	amidase activity
RR32_08545	COG4638	Rieske (2fe-2S)
RR32_08555	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_08565	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RR32_08580	COG3328	transposase activity
RR32_08595	COG1012	belongs to the aldehyde dehydrogenase family
RR32_08600	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
RR32_08605	COG0183	Belongs to the thiolase family
RR32_08610	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
RR32_08615	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
RR32_08625	COG4829	muconolactone delta-isomerase
RR32_08630	COG4948	Mandelate Racemase Muconate Lactonizing
RR32_08635	COG0583	DNA-binding transcription factor activity
RR32_08645	COG2186	Transcriptional regulator
RR32_08665	COG1012	belongs to the aldehyde dehydrogenase family
RR32_08690	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
RR32_08700	COG0789	Transcriptional regulator
RR32_08715	COG1309	transcriptional regulator
RR32_08720	COG1733	regulation of RNA biosynthetic process
RR32_08725	COG0702	epimerase
RR32_08735	COG1309	transcriptional regulator
RR32_08785	COG0583	DNA-binding transcription factor activity
RR32_08800	COG1566	PFAM secretion protein HlyD family protein
RR32_08815	COG1012	belongs to the aldehyde dehydrogenase family
RR32_08820	COG0129	dihydroxy-acid dehydratase activity
RR32_08830	COG0583	DNA-binding transcription factor activity
RR32_08835	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RR32_08845	COG2084	Dehydrogenase
RR32_08860	COG1120	ATPase activity
RR32_08880	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
RR32_08950	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
RR32_08990	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RR32_08995	COG0601	transmembrane transport
RR32_09025	COG3539	Fimbrial protein
RR32_09050	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
RR32_09075	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RR32_09140	COG4771	TonB-dependent receptor
RR32_09145	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RR32_09150	COG3433	isochorismatase activity
RR32_09150	COG1535	isochorismatase
RR32_09155	COG1021	2,3-dihydroxybenzoate-AMP ligase
RR32_09160	COG1169	isochorismate synthase
RR32_09165	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_09170	COG2382	esterase
RR32_09175	COG3251	PFAM MbtH domain protein
RR32_09180	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
RR32_09210	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
RR32_09215	COG4149	molybdate abc transporter
RR32_09220	COG0725	ABC transporter, periplasmic molybdate-binding protein
RR32_09230	COG4638	Rieske (2fe-2S)
RR32_09235	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
RR32_09240	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RR32_09240	COG0543	2 iron, 2 sulfur cluster binding
RR32_09255	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RR32_09265	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_09270	COG0412	Dienelactone hydrolase
RR32_09280	COG2207	Transcriptional regulator
RR32_09285	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_09290	COG2610	gluconate transmembrane transporter activity
RR32_09295	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RR32_09335	COG0583	DNA-binding transcription factor activity
RR32_09350	COG2031	fatty acid transporter
RR32_09355	COG0183	Belongs to the thiolase family
RR32_09360	COG0583	DNA-binding transcription factor activity
RR32_09365	COG0583	DNA-binding transcription factor activity
RR32_09380	COG1027	Aspartate ammonia-lyase
RR32_09390	COG0477	Major facilitator Superfamily
RR32_09410	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RR32_09415	COG4521	taurine ABC transporter
RR32_09440	COG3708	Transcriptional regulator
RR32_09440	COG2207	Transcriptional regulator
RR32_09455	COG0730	response to heat
RR32_09465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RR32_09465	COG3453	Protein conserved in bacteria
RR32_09475	COG3781	membrane
RR32_09480	COG1063	alcohol dehydrogenase
RR32_09490	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RR32_09495	COG0508	dehydrogenase complex catalyzes the overall conversion of
RR32_09500	COG0022	dehydrogenase e1 component
RR32_09505	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
RR32_09525	COG3706	GGDEF domain
RR32_09540	COG0133	tryptophan synthase activity
RR32_09550	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RR32_09585	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
RR32_09610	COG2226	methyltransferase
RR32_09665	COG0842	Transport permease protein
RR32_09670	COG0842	Transport permease protein
RR32_09675	COG1131	(ABC) transporter
RR32_09690	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RR32_09695	COG4773	Receptor
RR32_09715	COG0730	response to heat
RR32_09720	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
RR32_09730	COG4772	TonB-dependent receptor
RR32_09745	COG0406	alpha-ribazole phosphatase activity
RR32_09750	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
RR32_09765	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RR32_09770	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
RR32_09785	COG1960	acyl-CoA dehydrogenase activity
RR32_09790	COG1960	acyl-CoA dehydrogenase activity
RR32_09795	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RR32_09800	COG2207	Transcriptional regulator
RR32_09805	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
RR32_09810	COG0776	regulation of translation
RR32_09835	COG0822	iron-sulfur transferase activity
RR32_09840	COG0316	Belongs to the HesB IscA family
RR32_09870	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
RR32_09890	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
RR32_09895	COG0702	epimerase
RR32_09925	COG4172	Belongs to the ABC transporter superfamily
RR32_09930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RR32_09935	COG0601	transmembrane transport
RR32_09940	COG0339	signal peptide processing
RR32_09960	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
RR32_09985	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
RR32_09990	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
RR32_10005	COG2431	L-lysine efflux transmembrane transporter activity
RR32_10020	COG0776	regulation of translation
RR32_10040	COG0590	tRNA wobble adenosine to inosine editing
RR32_10085	COG0084	hydrolase, TatD family'
RR32_10105	COG1663	tetraacyldisaccharide 4'-kinase activity
RR32_10110	COG1132	(ABC) transporter
RR32_10120	COG0811	peptide transport
RR32_10125	COG1475	DNA binding
RR32_10130	COG1192	Involved in chromosome partitioning
RR32_10140	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
RR32_10155	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
RR32_10160	COG0191	fructose-bisphosphate aldolase activity
RR32_10180	COG0424	maF-like protein
RR32_10185	COG2850	peptidyl-arginine hydroxylation
RR32_10195	COG0640	Transcriptional regulator
RR32_10205	COG3619	membrane
RR32_10210	COG3122	Protein conserved in bacteria
RR32_10215	COG1132	(ABC) transporter
RR32_10235	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
RR32_10240	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RR32_10250	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
RR32_10250	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
RR32_10250	COG0506	proline dehydrogenase activity
RR32_10255	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
RR32_10270	COG3698	Phosphodiester glycosidase
RR32_10280	COG2353	YceI-like domain
RR32_10290	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
RR32_10330	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
RR32_10330	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
RR32_10355	COG3539	Fimbrial protein
RR32_10360	COG3121	Chaperone
RR32_10395	COG0697	spore germination
RR32_10405	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
RR32_10415	COG0583	DNA-binding transcription factor activity
RR32_10435	COG1309	transcriptional regulator
RR32_10450	COG1522	sequence-specific DNA binding
RR32_10460	COG1126	abc transporter atp-binding protein
RR32_10465	COG0765	amino acid transport
RR32_10470	COG0765	amino acid transport
RR32_10500	COG1464	Belongs to the NlpA lipoprotein family
RR32_10505	COG1464	Belongs to the NlpA lipoprotein family
RR32_10510	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
RR32_10515	COG2011	ABC-type metal ion transport system permease component
RR32_10520	COG0012	GTP binding
RR32_10545	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
RR32_10585	COG0386	Belongs to the glutathione peroxidase family
RR32_10595	COG0436	Aminotransferase
RR32_10600	COG1301	dicarboxylic acid transport
RR32_10635	COG3634	alkyl hydroperoxide reductase activity
RR32_10650	COG0583	DNA-binding transcription factor activity
RR32_10655	COG0798	PFAM Bile acid sodium symporter
RR32_10660	COG0640	Transcriptional regulator
RR32_10675	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
RR32_10685	COG0583	DNA-binding transcription factor activity
RR32_10695	COG1953	Uracil, thiamine, allantoin
RR32_10705	COG2175	clavaminate synthase activity
RR32_10710	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RR32_10715	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
RR32_10720	COG4521	taurine ABC transporter
RR32_10730	COG0477	Major facilitator Superfamily
RR32_10750	COG1271	oxidase subunit
RR32_10755	COG1294	oxidase, subunit
RR32_10765	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RR32_10785	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
RR32_10805	COG3052	prosthetic group binding
RR32_10810	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
RR32_10820	COG2814	Major facilitator Superfamily
RR32_10840	COG1346	cytolysis
RR32_10850	COG0583	DNA-binding transcription factor activity
RR32_10855	COG0625	glutathione transferase activity
RR32_10860	COG0625	glutathione transferase activity
RR32_10865	COG0583	DNA-binding transcription factor activity
RR32_10880	COG1045	serine acetyltransferase
RR32_10885	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RR32_10890	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
RR32_10895	COG1280	lysine exporter protein (LysE YggA)
RR32_10905	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RR32_10910	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RR32_10915	COG1126	abc transporter atp-binding protein
RR32_10920	COG0765	amino acid transport
RR32_10925	COG0765	amino acid transport
RR32_10940	COG0784	Response regulator, receiver
RR32_10940	COG2205	protein histidine kinase activity
RR32_10960	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
RR32_10980	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_11030	COG0583	DNA-binding transcription factor activity
RR32_11050	COG0318	PFAM AMP-dependent synthetase and ligase
RR32_11055	COG1309	transcriptional regulator
RR32_11060	COG1960	acyl-CoA dehydrogenase activity
RR32_11065	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
RR32_11070	COG1024	Enoyl-CoA hydratase
RR32_11085	COG0583	DNA-binding transcription factor activity
RR32_11100	COG1960	acyl-CoA dehydrogenase activity
RR32_11110	COG2814	Major facilitator Superfamily
RR32_11120	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
RR32_11125	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
RR32_11130	COG2814	Major facilitator Superfamily
RR32_11135	COG1960	acyl-CoA dehydrogenase activity
RR32_11140	COG1024	Enoyl-CoA hydratase
RR32_11145	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_11150	COG1250	3-hydroxyacyl-CoA dehydrogenase
RR32_11155	COG0183	Belongs to the thiolase family
RR32_11165	COG2814	Major facilitator Superfamily
RR32_11180	COG1024	Enoyl-CoA hydratase
RR32_11195	COG1960	acyl-CoA dehydrogenase activity
RR32_11200	COG2814	Major facilitator Superfamily
RR32_11205	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RR32_11225	COG3842	ATPase activity
RR32_11230	COG1840	ABC-type Fe3 transport system, periplasmic component
RR32_11240	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RR32_11245	COG1414	Transcriptional regulator
RR32_11255	COG0583	DNA-binding transcription factor activity
RR32_11270	COG1073	alpha beta
RR32_11275	COG1073	alpha beta
RR32_11285	COG1309	transcriptional regulator
RR32_11320	COG2050	protein possibly involved in aromatic compounds catabolism
RR32_11330	COG3327	negative regulation of DNA-templated transcription, initiation
RR32_11335	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
RR32_11340	COG0183	Belongs to the thiolase family
RR32_11345	COG1250	3-hydroxyacyl-CoA dehydrogenase
RR32_11350	COG1024	Enoyl-CoA hydratase
RR32_11355	COG1024	Enoyl-CoA hydratase
RR32_11360	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RR32_11365	COG2151	metal-sulfur cluster biosynthetic enzyme
RR32_11370	COG3396	Phenylacetate-CoA oxygenase
RR32_11375	COG3460	Phenylacetate-CoA oxygenase
RR32_11380	COG3396	Phenylacetate-CoA oxygenase
RR32_11385	COG2030	dehydratase
RR32_11385	COG1012	belongs to the aldehyde dehydrogenase family
RR32_11390	COG1760	l-serine dehydratase
RR32_11395	COG0531	amino acid
RR32_11400	COG1012	belongs to the aldehyde dehydrogenase family
RR32_11445	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RR32_11460	COG0789	Transcriptional regulator
RR32_11470	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
RR32_11485	COG2807	transmembrane transport
RR32_11490	COG0590	tRNA wobble adenosine to inosine editing
RR32_11495	COG0583	DNA-binding transcription factor activity
RR32_11565	COG1262	PFAM Formylglycine-generating sulfatase enzyme
RR32_11585	COG0477	Major facilitator Superfamily
RR32_11600	COG1116	anion transmembrane transporter activity
RR32_11615	COG0864	Transcriptional regulator
RR32_11630	COG1733	regulation of RNA biosynthetic process
RR32_11635	COG2249	NAD(P)H dehydrogenase (quinone) activity
RR32_11640	COG0439	Biotin carboxylase
RR32_11655	COG1063	alcohol dehydrogenase
RR32_11695	COG0038	chloride channel
RR32_11700	COG4770	biotin carboxylase activity
RR32_11720	COG1914	H( )-stimulated, divalent metal cation uptake system
RR32_11725	COG0583	DNA-binding transcription factor activity
RR32_11735	COG1595	DNA-templated transcription, initiation
RR32_11745	COG3220	belongs to the UPF0276 family
RR32_11820	COG3501	Rhs element vgr protein
RR32_11830	COG1011	Hydrolase
RR32_11845	COG1250	3-hydroxyacyl-CoA dehydrogenase
RR32_11860	COG0789	Transcriptional regulator
RR32_11865	COG1278	Cold shock
RR32_11875	COG0626	cystathionine gamma-synthase activity
RR32_11885	COG1522	sequence-specific DNA binding
RR32_11890	COG3123	guanosine phosphorylase activity
RR32_11895	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_11905	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RR32_11910	COG4774	siderophore transport
RR32_11935	COG2814	Major facilitator Superfamily
RR32_11950	COG1522	sequence-specific DNA binding
RR32_11985	COG1960	acyl-CoA dehydrogenase activity
RR32_11995	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_12000	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_12005	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_12020	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
RR32_12060	COG1538	Outer membrane efflux protein
RR32_12065	COG1137	ATPase activity
RR32_12070	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
RR32_12080	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
RR32_12105	COG0667	Aldo Keto reductase
RR32_12110	COG1733	regulation of RNA biosynthetic process
RR32_12115	COG2814	Major facilitator Superfamily
RR32_12170	COG1280	lysine exporter protein (LysE YggA)
RR32_12200	COG1570	exodeoxyribonuclease VII activity
RR32_12250	COG0583	DNA-binding transcription factor activity
RR32_12255	COG4638	Rieske (2fe-2S)
RR32_12260	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
RR32_12265	COG0633	Ferredoxin
RR32_12265	COG0543	2 iron, 2 sulfur cluster binding
RR32_12270	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_12275	COG3135	benzoate transporter
RR32_12280	COG2814	Major facilitator Superfamily
RR32_12295	COG1643	Atp-dependent helicase
RR32_12300	COG0450	alkyl hydroperoxide reductase
RR32_12320	COG3634	alkyl hydroperoxide reductase activity
RR32_12340	COG0220	tRNA (guanine-N7-)-methyltransferase activity
RR32_12345	COG0625	glutathione transferase activity
RR32_12355	COG2885	chlorophyll binding
RR32_12390	COG0542	response to heat
RR32_12405	COG1765	OsmC-like protein
RR32_12415	COG0667	Aldo Keto reductase
RR32_12430	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
RR32_12440	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
RR32_12460	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
RR32_12470	COG3038	cytochrome b561
RR32_12475	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
RR32_12480	COG2252	PERMEase
RR32_12490	COG2072	flavoprotein involved in K transport
RR32_12505	COG1741	Belongs to the pirin family
RR32_12510	COG1309	transcriptional regulator
RR32_12525	COG2072	flavoprotein involved in K transport
RR32_12530	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
RR32_12560	COG1944	ATP diphosphatase activity
RR32_12580	COG1262	PFAM Formylglycine-generating sulfatase enzyme
RR32_12595	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RR32_12610	COG2814	Major facilitator Superfamily
RR32_12615	COG1024	Enoyl-CoA hydratase
RR32_12620	COG1012	belongs to the aldehyde dehydrogenase family
RR32_12630	COG1960	acyl-CoA dehydrogenase activity
RR32_12650	COG0697	spore germination
RR32_12670	COG1113	amino acid transport
RR32_12690	COG1012	belongs to the aldehyde dehydrogenase family
RR32_12710	COG0531	amino acid
RR32_12720	COG1113	amino acid transport
RR32_12760	COG1902	pentaerythritol trinitrate reductase activity
RR32_12760	COG0446	pyridine nucleotide-disulphide oxidoreductase
RR32_12770	COG4251	negative regulation of phosphorylation
RR32_12770	COG2203	Gaf domain
RR32_12770	COG5001	Diguanylate cyclase
RR32_12770	COG3706	GGDEF domain
RR32_12780	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
RR32_12795	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
RR32_12830	COG4172	Belongs to the ABC transporter superfamily
RR32_12835	COG4239	(ABC) transporter, permease
RR32_12840	COG4174	ABC transporter (Permease)
RR32_12850	COG1388	LysM domain
RR32_12850	COG0741	lytic transglycosylase activity
RR32_12850	COG1388	LysM domain
RR32_12850	COG0741	lytic transglycosylase activity
RR32_12855	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
RR32_12890	COG0583	DNA-binding transcription factor activity
RR32_12895	COG1279	arginine transmembrane transporter activity
RR32_12915	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RR32_12920	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RR32_12925	COG0006	proline dipeptidase activity
RR32_12955	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
RR32_12970	COG3328	transposase activity
RR32_13010	COG3384	dioxygenase
RR32_13020	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
RR32_13025	COG2878	Part of a membrane complex involved in electron transport
RR32_13030	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
RR32_13055	COG0768	penicillin binding
RR32_13060	COG0742	ribosomal rna small subunit methyltransferase
RR32_13080	COG0830	nickel cation binding
RR32_13090	COG0804	urea catabolic process
RR32_13130	COG1253	flavin adenine dinucleotide binding
RR32_13135	COG2851	Citrate transporter
RR32_13180	COG1773	rubredoxin
RR32_13185	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RR32_13195	COG0583	DNA-binding transcription factor activity
RR32_13220	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
RR32_13225	COG4181	ATPase activity
RR32_13270	COG1262	PFAM Formylglycine-generating sulfatase enzyme
RR32_13290	COG0306	phosphate transporter
RR32_13315	COG2223	nitrite transmembrane transporter activity
RR32_13320	COG2207	Transcriptional regulator
RR32_13320	COG0662	Cupin 2, conserved barrel domain protein
RR32_13325	COG2066	Belongs to the glutaminase family
RR32_13330	COG0242	peptide deformylase activity
RR32_13335	COG0477	Major facilitator Superfamily
RR32_13345	COG0028	Belongs to the TPP enzyme family
RR32_13360	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_13365	COG2267	carboxylic ester hydrolase activity
RR32_13375	COG2271	Major facilitator Superfamily
RR32_13380	COG0446	pyridine nucleotide-disulphide oxidoreductase
RR32_13410	COG1414	Transcriptional regulator
RR32_13435	COG1024	Enoyl-CoA hydratase
RR32_13445	COG1215	transferase activity, transferring glycosyl groups
RR32_13450	COG0726	polysaccharide deacetylase
RR32_13450	COG1649	PFAM Uncharacterised BCR, COG1649
RR32_13460	COG4681	YaeQ
RR32_13470	COG0523	cobalamin synthesis protein
RR32_13480	COG1607	acyl-coa hydrolase
RR32_13490	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
RR32_13495	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
RR32_13500	COG1309	transcriptional regulator
RR32_13525	COG2040	homocysteine
RR32_13530	COG0531	amino acid
RR32_13550	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RR32_13555	COG0477	Major facilitator Superfamily
RR32_13610	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
RR32_13615	COG3586	endonuclease activity
RR32_13660	COG2814	Major facilitator Superfamily
RR32_13670	COG2050	protein possibly involved in aromatic compounds catabolism
RR32_13685	COG1090	epimerase
RR32_13705	COG0420	3'-5' exonuclease activity
RR32_13715	COG1968	undecaprenyl-diphosphatase activity
RR32_13735	COG0735	belongs to the Fur family
RR32_13740	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RR32_13745	COG2914	Belongs to the UPF0125 (RnfH) family
RR32_13760	COG0121	glutamine amidotransferase
RR32_13775	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
RR32_13785	COG0210	DNA helicase
RR32_13790	COG2885	chlorophyll binding
RR32_13795	COG0204	Acyl-transferase
RR32_13810	COG2894	cell division
RR32_13825	COG1280	lysine exporter protein (LysE YggA)
RR32_13830	COG1674	ftsk spoiiie
RR32_13835	COG0492	ferredoxin-NADP+ reductase activity
RR32_13840	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
RR32_13850	COG0456	acetyltransferase
RR32_13880	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
RR32_13910	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
RR32_13910	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RR32_13930	COG1012	belongs to the aldehyde dehydrogenase family
RR32_13935	COG4638	Rieske (2fe-2S)
RR32_13950	COG0473	3-isopropylmalate dehydrogenase activity
RR32_13955	COG0583	DNA-binding transcription factor activity
RR32_13970	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
RR32_14005	COG0358	DNA primase activity
RR32_14020	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
RR32_14050	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
RR32_14080	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
RR32_14090	COG0352	thiamine-phosphate diphosphorylase activity
RR32_14090	COG0351	phosphomethylpyrimidine kinase
RR32_14090	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
RR32_14095	COG1652	LysM domain
RR32_14120	COG1399	metal-binding, possibly nucleic acid-binding protein
RR32_14125	COG3101	peptidyl-lysine hydroxylation
RR32_14130	COG0009	L-threonylcarbamoyladenylate synthase
RR32_14135	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
RR32_14140	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
RR32_14155	COG4106	trans-aconitate 2-methyltransferase activity
RR32_14170	COG2226	methyltransferase
RR32_14170	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
RR32_14170	COG0596	Alpha beta hydrolase
RR32_14175	COG1877	trehalose-phosphatase activity
RR32_14180	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
RR32_14185	COG2223	nitrite transmembrane transporter activity
RR32_14205	COG1196	nuclear chromosome segregation
RR32_14215	COG0730	response to heat
RR32_14230	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
RR32_14240	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RR32_14290	COG0489	protein tyrosine kinase activity
RR32_14300	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RR32_14300	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RR32_14335	COG2515	1-aminocyclopropane-1-carboxylate deaminase
RR32_14340	COG2081	HI0933 family
RR32_14350	COG0668	transmembrane transport
RR32_14370	COG0583	DNA-binding transcription factor activity
RR32_14395	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RR32_14400	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
RR32_14430	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
RR32_14465	COG2205	protein histidine kinase activity
RR32_14470	COG0745	RESPONSE REGULATOR receiver
RR32_14550	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RR32_14555	COG0384	phenazine biosynthesis protein PhzF
RR32_14635	COG1309	transcriptional regulator
RR32_14640	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RR32_14645	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
RR32_14655	COG0583	DNA-binding transcription factor activity
RR32_14665	COG0583	DNA-binding transcription factor activity
RR32_14680	COG0583	DNA-binding transcription factor activity
RR32_14685	COG1053	succinate dehydrogenase
RR32_14700	COG1309	transcriptional regulator
RR32_14710	COG1804	L-carnitine dehydratase bile acid-inducible protein F
RR32_14715	COG2814	Major facilitator Superfamily
RR32_14720	COG1960	acyl-CoA dehydrogenase activity
RR32_14725	COG0583	DNA-binding transcription factor activity
RR32_14730	COG1063	alcohol dehydrogenase
RR32_14760	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
RR32_14765	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
RR32_14770	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RR32_14790	COG2132	Multicopper oxidase
RR32_14800	COG0561	phosphatase activity
RR32_14805	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
RR32_14830	COG1214	PFAM Peptidase M22, glycoprotease
RR32_14880	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
RR32_14890	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
RR32_14895	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
RR32_14900	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
RR32_14960	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RR32_14970	COG1846	Transcriptional regulator
RR32_14975	COG1764	response to oxidative stress
RR32_15000	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RR32_15000	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RR32_15015	COG0037	tRNA processing
RR32_15025	COG0248	Ppx GppA phosphatase
RR32_15050	COG0072	phenylalanine-tRNA ligase activity
RR32_15075	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
RR32_15080	COG0291	Belongs to the bacterial ribosomal protein bL35 family
RR32_15090	COG1238	metal cluster binding
RR32_15095	COG0625	glutathione transferase activity
RR32_15110	COG0318	PFAM AMP-dependent synthetase and ligase
RR32_15115	COG3028	Belongs to the UPF0307 family
RR32_15120	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
RR32_15140	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
RR32_15145	COG0617	tRNA 3'-terminal CCA addition
RR32_15150	COG1555	photosystem II stabilization
RR32_15155	COG3956	TIGRFAM MazG family protein
RR32_15165	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RR32_15185	COG2205	protein histidine kinase activity
RR32_15185	COG0784	Response regulator, receiver
RR32_15185	COG5002	protein histidine kinase activity
RR32_15190	COG1024	Enoyl-CoA hydratase
RR32_15195	COG2084	Dehydrogenase
RR32_15200	COG3622	Belongs to the hyi family
RR32_15215	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
RR32_15220	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
RR32_15225	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
RR32_15230	COG0697	spore germination
RR32_15240	COG2814	Major facilitator Superfamily
RR32_15280	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RR32_15305	COG2132	Multicopper oxidase
RR32_15320	COG2205	protein histidine kinase activity
RR32_15360	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RR32_15375	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
RR32_15385	COG0084	hydrolase, TatD family'
RR32_15400	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
RR32_15430	COG0440	acetolactate synthase activity
RR32_15435	COG0028	Belongs to the TPP enzyme family
RR32_15460	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RR32_15465	COG1136	(ABC) transporter
RR32_15465	COG0577	efflux transmembrane transporter activity
RR32_15470	COG1538	Outer membrane efflux protein
RR32_15485	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
RR32_15490	COG1162	GTPase activity
RR32_15500	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
RR32_15520	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RR32_15540	COG1426	Protein conserved in bacteria
RR32_15575	COG0793	Belongs to the peptidase S41A family
RR32_15600	COG1012	belongs to the aldehyde dehydrogenase family
RR32_15605	COG3265	gluconokinase activity
RR32_15615	COG0800	Aldolase
RR32_15625	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
RR32_15630	COG0280	phosphate acetyltransferase
RR32_15630	COG0857	belongs to the CobB CobQ family
RR32_15635	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
RR32_15635	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
RR32_15655	COG0740	serine-type endopeptidase activity
RR32_15665	COG4774	siderophore transport
RR32_15675	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RR32_15685	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
RR32_15685	COG2813	Specifically methylates the guanine in position
RR32_15790	COG0788	formyltetrahydrofolate deformylase activity
RR32_15805	COG0227	Belongs to the bacterial ribosomal protein bL28 family
RR32_15810	COG0267	Belongs to the bacterial ribosomal protein bL33 family
RR32_15815	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RR32_15815	COG4651	solute:proton antiporter activity
RR32_15835	COG0724	RNA recognition motif
RR32_15840	COG0210	DNA helicase
RR32_15865	COG1733	regulation of RNA biosynthetic process
RR32_15875	COG2900	Belongs to the SlyX family
RR32_15890	COG1280	lysine exporter protein (LysE YggA)
RR32_15895	COG1560	Kdo2-lipid A biosynthetic process
RR32_15905	COG1301	dicarboxylic acid transport
RR32_15960	COG0473	3-isopropylmalate dehydrogenase activity
RR32_15985	COG0583	DNA-binding transcription factor activity
RR32_16025	COG0583	DNA-binding transcription factor activity
RR32_16035	COG0625	glutathione transferase activity
RR32_16040	COG2378	regulation of single-species biofilm formation
RR32_16055	COG1530	ribonuclease E activity
RR32_16075	COG0583	DNA-binding transcription factor activity
RR32_16080	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_16085	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RR32_16095	COG0534	Mate efflux family protein
RR32_16110	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
RR32_16145	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
RR32_16150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RR32_16165	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
RR32_16175	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
RR32_16175	COG0644	oxidoreductase
RR32_16190	COG4535	Mg2 and Co2 transporter CorC
RR32_16200	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RR32_16225	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
RR32_16230	COG0475	glutathione-regulated potassium exporter activity
RR32_16230	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RR32_16235	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
RR32_16245	COG0484	heat shock protein binding
RR32_16250	COG0789	Transcriptional regulator
RR32_16255	COG0598	Magnesium transport protein CorA
RR32_16260	COG1185	polyribonucleotide nucleotidyltransferase activity
RR32_16275	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RR32_16280	COG1074	ATP-dependent DNA helicase activity
RR32_16285	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
RR32_16310	COG2226	methyltransferase
RR32_16320	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
RR32_16325	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RR32_16340	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
RR32_16355	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
RR32_16355	COG2111	Na H antiporter
RR32_16360	COG1006	Multisubunit Na H antiporter MnhC subunit
RR32_16365	COG0651	ATP synthesis coupled electron transport
RR32_16375	COG2212	antiporter activity
RR32_16385	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
RR32_16395	COG0195	Participates in both transcription termination and antitermination
RR32_16445	COG0237	dephospho-CoA kinase activity
RR32_16455	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RR32_16470	COG0497	DNA recombination
RR32_16480	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
RR32_16495	COG1289	transmembrane transporter activity
RR32_16510	COG2169	Transcriptional regulator
RR32_16510	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RR32_16515	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
RR32_16560	COG3545	Serine hydrolase
RR32_16575	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
RR32_16590	COG0326	Molecular chaperone. Has ATPase activity
RR32_16605	COG2056	Na+-H+ antiporter family
RR32_16610	COG0596	Alpha beta hydrolase
RR32_16705	COG0546	phosphoglycolate phosphatase activity
RR32_16710	COG1716	ATPase activity
RR32_16755	COG0181	hydroxymethylbilane synthase activity
RR32_16765	COG3275	phosphorelay sensor kinase activity
RR32_16785	COG1538	Outer membrane efflux protein
RR32_16790	COG0697	spore germination
RR32_16810	COG0494	nUDIX hydrolase
RR32_16815	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
RR32_16820	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
RR32_16825	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
RR32_16830	COG0772	Belongs to the SEDS family
RR32_16855	COG4974	Belongs to the 'phage' integrase family
RR32_16860	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
RR32_16870	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
RR32_16880	COG2197	response regulator
RR32_16895	COG0793	Belongs to the peptidase S41A family
RR32_16900	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
RR32_16905	COG0795	lipopolysaccharide-transporting ATPase activity
RR32_16945	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RR32_16945	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RR32_16955	COG0004	ammonium transporteR
RR32_16960	COG0347	Belongs to the P(II) protein family
RR32_16970	COG0606	chelatase, subunit chli
RR32_16975	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RR32_16980	COG0235	Class ii aldolase
RR32_16985	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RR32_17000	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
RR32_17015	COG0318	PFAM AMP-dependent synthetase and ligase
RR32_17025	COG0477	Major facilitator Superfamily
RR32_17030	COG2860	membrane
RR32_17040	COG1253	flavin adenine dinucleotide binding
RR32_17050	COG2814	Major facilitator Superfamily
RR32_17060	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
RR32_17095	COG0655	NAD(P)H dehydrogenase (quinone) activity
RR32_17110	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
RR32_17145	COG1309	transcriptional regulator
RR32_17155	COG3328	transposase activity
RR32_17190	COG0758	DNA mediated transformation
RR32_17200	COG0697	spore germination
RR32_17205	COG1309	transcriptional regulator
RR32_17220	COG0386	Belongs to the glutathione peroxidase family
RR32_17230	COG0355	proton-transporting ATP synthase activity, rotational mechanism
RR32_17285	COG1121	(ABC) transporter
RR32_17290	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RR32_17295	COG1280	lysine exporter protein (LysE YggA)
RR32_17300	COG2837	iron assimilation
RR32_17310	COG0281	malic enzyme
RR32_17345	COG0735	belongs to the Fur family
RR32_17355	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RR32_17360	COG0519	Catalyzes the synthesis of GMP from XMP
RR32_17360	COG0518	GMP synthase (glutamine-hydrolyzing) activity
RR32_17365	COG4399	Belongs to the UPF0754 family
RR32_17365	COG4399	Belongs to the UPF0754 family
RR32_17370	COG2259	Doxx family
RR32_17375	COG0586	Pfam SNARE associated Golgi protein
RR32_17390	COG1192	Involved in chromosome partitioning
RR32_17400	COG0271	Belongs to the BolA IbaG family
RR32_17445	COG1960	acyl-CoA dehydrogenase activity
RR32_17450	COG0318	PFAM AMP-dependent synthetase and ligase
RR32_17455	COG2197	response regulator
RR32_17480	COG3916	Acyl-homoserine-lactone synthase
RR32_17485	COG0477	Major facilitator Superfamily
RR32_17490	COG1024	Enoyl-CoA hydratase
RR32_17495	COG1024	Enoyl-CoA hydratase
RR32_17500	COG1960	acyl-CoA dehydrogenase activity
RR32_17505	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
RR32_17525	COG1113	amino acid transport
RR32_17530	COG1113	amino acid transport
RR32_17535	COG0251	oxidation-reduction process
RR32_17550	COG1522	sequence-specific DNA binding
RR32_17575	COG0564	pseudouridine synthase activity
RR32_17650	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
RR32_17665	COG1802	Transcriptional regulator
RR32_17670	COG1448	Aminotransferase
RR32_17675	COG0277	FAD linked oxidase domain protein
RR32_17685	COG2186	Transcriptional regulator
RR32_17695	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
RR32_17705	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
RR32_17720	COG1210	Utp--glucose-1-phosphate uridylyltransferase
RR32_17725	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
RR32_17730	COG1216	Glycosyl transferase, family 2
RR32_17745	COG0463	Glycosyl transferase, family 2
RR32_17745	COG1216	Glycosyl transferase, family 2
RR32_17755	COG2244	polysaccharide biosynthetic process
RR32_17770	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
RR32_17780	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
RR32_17785	COG1596	polysaccharide export
RR32_17810	COG0728	peptidoglycan biosynthetic process
RR32_17815	COG3023	N-Acetylmuramoyl-L-alanine amidase
RR32_17870	COG0546	phosphoglycolate phosphatase activity
RR32_17875	COG1028	Short-chain dehydrogenase reductase Sdr
RR32_17890	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
RR32_17890	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
RR32_17895	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RR32_17900	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RR32_17905	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RR32_17910	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RR32_17915	COG1116	anion transmembrane transporter activity
RR32_17920	COG1309	transcriptional regulator
RR32_17925	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
RR32_17935	COG0196	riboflavin kinase activity
RR32_17940	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
RR32_17950	COG1047	Peptidyl-prolyl cis-trans
RR32_17990	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
RR32_18015	COG0583	DNA-binding transcription factor activity
RR32_18045	COG2951	lytic endotransglycosylase activity
RR32_18050	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
RR32_18065	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
RR32_18075	COG0671	phosphoesterase, PA-phosphatase related
RR32_18080	COG0861	Integral membrane protein TerC family
RR32_18090	COG0754	glutathionylspermidine amidase activity
RR32_18100	COG0402	S-adenosylhomocysteine deaminase activity
RR32_18120	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
RR32_18125	COG1230	cation diffusion facilitator family transporter
RR32_18140	COG0706	membrane insertase activity
RR32_18155	COG0230	Belongs to the bacterial ribosomal protein bL34 family
RR32_18165	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
RR32_18170	COG2963	transposase activity
RR32_18210	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
RR32_18240	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
RR32_18250	COG3077	Addiction module antitoxin, RelB DinJ family
RR32_18275	COG0697	spore germination
RR32_18280	COG0477	Major facilitator Superfamily
RR32_18305	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
RR32_18315	COG1979	alcohol dehydrogenase
RR32_18325	COG1902	pentaerythritol trinitrate reductase activity
RR32_18335	COG1309	transcriptional regulator
RR32_18340	COG2130	NADP-dependent
RR32_18355	COG0582	viral genome integration into host DNA
RR32_18375	COG0604	alcohol dehydrogenase
RR32_18380	COG3328	transposase activity
RR32_18405	COG1192	Involved in chromosome partitioning
RR32_18410	COG1475	DNA binding
RR32_18415	COG1785	Belongs to the alkaline phosphatase family
RR32_18500	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
RR32_18535	COG2184	nucleotidyltransferase activity
RR32_18600	COG0673	inositol 2-dehydrogenase activity
RR32_18620	COG2826	transposase and inactivated derivatives, IS30 family
RR32_18665	COG3293	Transposase
RR32_18670	COG0789	Transcriptional regulator
RR32_18675	COG2217	Heavy metal translocating P-type atpase
RR32_18680	COG0640	Transcriptional regulator
RR32_18690	COG1230	cation diffusion facilitator family transporter
RR32_18695	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RR32_18705	COG1538	Outer membrane efflux protein
RR32_18730	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
RR32_18810	COG3451	type IV secretory pathway VirB4
RR32_18830	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
RR32_18880	COG1192	Involved in chromosome partitioning
RR32_18915	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
RR32_18925	COG2076	Multidrug Resistance protein
RR32_19100	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RR32_19125	COG2826	transposase and inactivated derivatives, IS30 family
RR32_19155	COG1525	nuclease
RR32_19180	COG0739	heme binding
RR32_19180	COG0741	lytic transglycosylase activity
RR32_19180	COG1196	nuclear chromosome segregation
RR32_19195	COG0741	lytic transglycosylase activity
RR32_19195	COG1196	nuclear chromosome segregation
RR32_19195	COG0739	heme binding
RR32_19255	COG1192	Involved in chromosome partitioning