RR32_00005 PF00308 Bacterial dnaA protein RR32_00005 PF08299 Bacterial dnaA protein helix-turn-helix RR32_00005 PF11638 DnaA N-terminal domain RR32_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain RR32_00010 PF02767 DNA polymerase III beta subunit, central domain RR32_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain RR32_00015 PF02463 RecF/RecN/SMC N terminal domain RR32_00020 PF00204 DNA gyrase B RR32_00020 PF00986 DNA gyrase B subunit, carboxyl terminus RR32_00020 PF01751 Toprim domain RR32_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_00025 PF07361 Cytochrome b562 RR32_00030 PF09335 RR32_00030 RR32_00035 PF00005 ABC transporter RR32_00035 PF12848 ABC transporter RR32_00055 PF01521 Iron-sulphur cluster biosynthesis RR32_00060 PF00561 alpha/beta hydrolase fold RR32_00065 PF03702 Uncharacterised protein family (UPF0075) RR32_00070 PF00579 tRNA synthetases class I (W and Y) RR32_00100 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RR32_00110 PF00209 Sodium:neurotransmitter symporter family RR32_00115 PF16951 RR32_00115 RR32_00120 PF01029 NusB family RR32_00120 PF01189 NOL1/NOP2/sun family RR32_00120 PF17125 RR32_00120 RR32_00125 PF00551 Formyl transferase RR32_00125 PF02911 Formyl transferase, C-terminal domain RR32_00130 PF00920 Dehydratase family RR32_00140 PF01925 RR32_00140 RR32_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_00145 PF03466 LysR substrate binding domain RR32_00150 PF00860 Permease family RR32_00155 PF00311 Phosphoenolpyruvate carboxylase RR32_00160 PF00440 Bacterial regulatory proteins, tetR family RR32_00165 PF16576 RR32_00165 RR32_00170 PF00873 AcrB/AcrD/AcrF family RR32_00180 PF00226 DnaJ domain RR32_00180 PF00684 DnaJ central domain RR32_00180 PF01556 DnaJ C terminal domain RR32_00190 PF01113 Dihydrodipicolinate reductase, N-terminus RR32_00190 PF05173 Dihydrodipicolinate reductase, C-terminus RR32_00195 PF01852 START domain RR32_00200 PF07690 Major Facilitator Superfamily RR32_00205 PF00248 Aldo/keto reductase family RR32_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_00210 PF03466 LysR substrate binding domain RR32_00220 PF00155 Aminotransferase class I and II RR32_00220 PF00392 Bacterial regulatory proteins, gntR family RR32_00225 PF00107 Zinc-binding dehydrogenase RR32_00225 PF08240 Alcohol dehydrogenase GroES-like domain RR32_00230 PF03352 Methyladenine glycosylase RR32_00240 PF01551 Peptidase family M23 RR32_00245 PF00730 HhH-GPD superfamily base excision DNA repair protein RR32_00245 PF14815 NUDIX domain RR32_00250 PF01230 HIT domain RR32_00255 PF01738 Dienelactone hydrolase family RR32_00260 PF07043 RR32_00260 RR32_00265 PF03692 RR32_00265 RR32_00270 PF07995 Glucose / Sorbosone dehydrogenase RR32_00275 PF00004 ATPase family associated with various cellular activities (AAA) RR32_00275 PF12002 MgsA AAA+ ATPase C terminal RR32_00275 PF16193 RR32_00275 RR32_00280 PF01226 Formate/nitrite transporter RR32_00290 PF01259 SAICAR synthetase RR32_00300 PF00701 Dihydrodipicolinate synthetase family RR32_00305 PF00857 Isochorismatase family RR32_00310 PF01758 Sodium Bile acid symporter family RR32_00315 PF01554 MatE RR32_00320 PF04463 RR32_00320 RR32_00325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RR32_00325 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal RR32_00330 PF01614 Bacterial transcriptional regulator RR32_00330 PF09339 IclR helix-turn-helix domain RR32_00335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RR32_00340 PF02798 Glutathione S-transferase, N-terminal domain RR32_00340 PF14497 Glutathione S-transferase, C-terminal domain RR32_00345 PF01557 Fumarylacetoacetate (FAA) hydrolase family RR32_00345 PF09298 Fumarylacetoacetase N-terminal RR32_00350 PF00324 Amino acid permease RR32_00355 PF08291 Peptidase M15 RR32_00360 PF02492 CobW/HypB/UreG, nucleotide-binding domain RR32_00360 PF07683 Cobalamin synthesis protein cobW C-terminal domain RR32_00365 PF01757 RR32_00365 RR32_00370 PF00392 Bacterial regulatory proteins, gntR family RR32_00370 PF07702 UTRA domain RR32_00375 PF05962 HutD RR32_00380 PF01175 Urocanase RR32_00380 PF17391 RR32_00380 RR32_00380 PF17392 RR32_00380 RR32_00385 PF00221 Aromatic amino acid lyase RR32_00390 PF00324 Amino acid permease RR32_00395 PF01979 Amidohydrolase family RR32_00400 PF00491 Arginase family RR32_00405 PF05960 Bacterial protein of unknown function (DUF885) RR32_00410 PF13419 Haloacid dehalogenase-like hydrolase RR32_00415 PF01177 Asp/Glu/Hydantoin racemase RR32_00420 PF01810 RR32_00420 RR32_00430 PF01380 SIS domain RR32_00430 PF13522 Glutamine amidotransferase domain RR32_00435 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_00435 PF12804 MobA-like NTP transferase domain RR32_00435 PF14602 Hexapeptide repeat of succinyl-transferase RR32_00440 PF04608 Phosphatidylglycerophosphatase A RR32_00445 PF00586 AIR synthase related protein, N-terminal domain RR32_00450 PF01029 NusB family RR32_00455 PF00885 6,7-dimethyl-8-ribityllumazine synthase RR32_00460 PF00925 GTP cyclohydrolase II RR32_00460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RR32_00470 PF12710 haloacid dehalogenase-like hydrolase RR32_00470 PF13740 ACT domain RR32_00490 PF02580 D-Tyr-tRNA(Tyr) deacylase RR32_00495 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RR32_00500 PF00581 Rhodanese-like domain RR32_00505 PF02666 RR32_00505 RR32_00515 PF12146 Putative lysophospholipase RR32_00520 PF00512 His Kinase A (phospho-acceptor) domain RR32_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_00520 PF11808 RR32_00520 RR32_00520 PF13188 PAS domain RR32_00525 PF00072 Response regulator receiver domain RR32_00525 PF00486 Transcriptional regulatory protein, C terminal RR32_00535 PF00106 short chain dehydrogenase RR32_00540 PF01554 MatE RR32_00545 PF00155 Aminotransferase class I and II RR32_00550 PF04286 RR32_00550 RR32_00560 PF06041 Bacterial protein of unknown function (DUF924) RR32_00565 PF04262 Glutamate-cysteine ligase RR32_00570 PF02600 Disulfide bond formation protein DsbB RR32_00575 PF05954 Phage late control gene D protein (GPD) RR32_00575 PF10106 RR32_00575 RR32_00575 PF13296 RR32_00575 RR32_00580 PF01476 LysM domain RR32_00580 PF01551 Peptidase family M23 RR32_00590 PF07007 Protein of unknown function (DUF1311) RR32_00595 PF08239 Bacterial SH3 domain RR32_00620 PF07819 PGAP1-like protein RR32_00625 PF05728 Uncharacterised protein family (UPF0227) RR32_00630 PF00204 DNA gyrase B RR32_00630 PF00986 DNA gyrase B subunit, carboxyl terminus RR32_00630 PF01751 Toprim domain RR32_00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_00635 PF04115 Ureidoglycolate hydrolase RR32_00640 PF03561 Allantoicase repeat RR32_00645 PF01494 FAD binding domain RR32_00650 PF03502 Nucleoside-specific channel-forming protein, Tsx RR32_00655 PF00860 Permease family RR32_00660 PF00576 HIUase/Transthyretin family RR32_00665 PF09349 OHCU decarboxylase RR32_00670 PF01522 Polysaccharide deacetylase RR32_00675 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RR32_00685 PF13557 RR32_00685 RR32_00690 PF00085 Thioredoxin RR32_00690 PF02683 RR32_00690 RR32_00690 PF11412 Disulphide bond corrector protein DsbC RR32_00695 PF00990 GGDEF domain RR32_00700 PF07859 alpha/beta hydrolase fold RR32_00705 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) RR32_00710 PF03960 ArsC family RR32_00715 PF03372 Endonuclease/Exonuclease/phosphatase family RR32_00720 PF00156 Phosphoribosyl transferase domain RR32_00725 PF00593 TonB dependent receptor RR32_00725 PF07715 TonB-dependent Receptor Plug Domain RR32_00730 PF08410 RR32_00730 RR32_00735 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RR32_00735 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RR32_00740 PF03033 Glycosyltransferase family 28 N-terminal domain RR32_00740 PF04101 Glycosyltransferase family 28 C-terminal domain RR32_00745 PF01225 Mur ligase family, catalytic domain RR32_00745 PF02875 Mur ligase family, glutamate ligase domain RR32_00745 PF08245 Mur ligase middle domain RR32_00750 PF01820 D-ala D-ala ligase N-terminus RR32_00750 PF07478 D-ala D-ala ligase C-terminus RR32_00755 PF03799 Cell division protein FtsQ RR32_00755 PF08478 POTRA domain, FtsQ-type RR32_00760 PF02491 SHS2 domain inserted in FTSA RR32_00760 PF14450 Cell division protein FtsA RR32_00765 PF00091 Tubulin/FtsZ family, GTPase domain RR32_00765 PF12327 FtsZ family, C-terminal domain RR32_00770 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RR32_00775 PF05258 RR32_00775 RR32_00780 PF01551 Peptidase family M23 RR32_00785 PF00456 Transketolase, thiamine diphosphate binding domain RR32_00790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RR32_00790 PF00364 Biotin-requiring enzyme RR32_00790 PF02817 e3 binding domain RR32_00800 PF01169 RR32_00800 RR32_00805 PF00753 Metallo-beta-lactamase superfamily RR32_00810 PF03692 RR32_00810 RR32_00815 PF00478 IMP dehydrogenase / GMP reductase domain RR32_00815 PF00571 CBS domain RR32_00820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RR32_00820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RR32_00820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RR32_00820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RR32_00825 PF01243 Pyridoxamine 5'-phosphate oxidase RR32_00825 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RR32_00830 PF01368 DHH family RR32_00830 PF02272 DHHA1 domain RR32_00835 PF16956 RR32_00835 RR32_00840 PF00472 RF-1 domain RR32_00840 PF03462 PCRF domain RR32_00845 PF12840 Helix-turn-helix domain RR32_00850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RR32_00860 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RR32_00865 PF04452 RNA methyltransferase RR32_00870 PF00924 Mechanosensitive ion channel RR32_00875 PF05656 RR32_00875 RR32_00880 PF00501 AMP-binding enzyme RR32_00880 PF13193 AMP-binding enzyme C-terminal domain RR32_00880 PF16177 RR32_00880 RR32_00885 PF00857 Isochorismatase family RR32_00890 PF13412 Winged helix-turn-helix DNA-binding RR32_00895 PF00296 Luciferase-like monooxygenase RR32_00900 PF03358 NADPH-dependent FMN reductase RR32_00905 PF00072 Response regulator receiver domain RR32_00905 PF00196 Bacterial regulatory proteins, luxR family RR32_00915 PF00072 Response regulator receiver domain RR32_00915 PF00512 His Kinase A (phospho-acceptor) domain RR32_00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_00915 PF12860 RR32_00915 RR32_00920 PF04341 RR32_00920 RR32_00925 PF00474 Sodium:solute symporter family RR32_00930 PF07885 Ion channel RR32_00935 PF02028 BCCT family transporter RR32_00940 PF16956 RR32_00940 RR32_00945 PF00990 GGDEF domain RR32_00950 PF00005 ABC transporter RR32_00955 PF00440 Bacterial regulatory proteins, tetR family RR32_00955 PF16925 RR32_00955 RR32_00960 PF00107 Zinc-binding dehydrogenase RR32_00960 PF08240 Alcohol dehydrogenase GroES-like domain RR32_00965 PF06993 RR32_00965 RR32_00970 PF06942 RR32_00970 RR32_00975 PF03070 TENA/THI-4/PQQC family RR32_00980 PF04332 RR32_00980 RR32_00985 PF07690 Major Facilitator Superfamily RR32_00990 PF00436 Single-strand binding protein family RR32_01000 PF00069 Protein kinase domain RR32_01000 PF08378 RR32_01000 RR32_01000 PF13086 AAA domain RR32_01000 PF13087 AAA domain RR32_01005 PF05437 RR32_01005 RR32_01010 PF03591 RR32_01010 RR32_01015 PF01381 Helix-turn-helix RR32_01015 PF07883 Cupin domain RR32_01020 PF00324 Amino acid permease RR32_01025 PF00155 Aminotransferase class I and II RR32_01025 PF00392 Bacterial regulatory proteins, gntR family RR32_01030 PF00202 Aminotransferase class-III RR32_01035 PF00171 Aldehyde dehydrogenase family RR32_01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_01040 PF03466 LysR substrate binding domain RR32_01045 PF00857 Isochorismatase family RR32_01050 PF02678 Pirin RR32_01050 PF05726 Pirin C-terminal cupin domain RR32_01055 PF01593 Flavin containing amine oxidoreductase RR32_01060 PF13489 Methyltransferase domain RR32_01065 PF04828 Glutathione-dependent formaldehyde-activating enzyme RR32_01070 PF02384 N-6 DNA Methylase RR32_01075 PF13175 AAA ATPase domain RR32_01125 PF01381 Helix-turn-helix RR32_01130 PF01381 Helix-turn-helix RR32_01135 PF00440 Bacterial regulatory proteins, tetR family RR32_01140 PF14518 Iron-containing redox enzyme RR32_01155 PF06094 AIG2-like family RR32_01160 PF07690 Major Facilitator Superfamily RR32_01165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_01165 PF03466 LysR substrate binding domain RR32_01170 PF00892 EamA-like transporter family RR32_01185 PF00248 Aldo/keto reductase family RR32_01190 PF12833 Helix-turn-helix domain RR32_01195 PF00440 Bacterial regulatory proteins, tetR family RR32_01220 PF00665 Integrase core domain RR32_01230 PF01638 HxlR-like helix-turn-helix RR32_01235 PF02525 Flavodoxin-like fold RR32_01255 PF02705 RR32_01255 RR32_01265 PF01223 DNA/RNA non-specific endonuclease RR32_01270 PF01810 RR32_01270 RR32_01280 PF00230 Major intrinsic protein RR32_01285 PF12625 RR32_01285 RR32_01285 PF12833 Helix-turn-helix domain RR32_01295 PF00977 Histidine biosynthesis protein RR32_01300 PF01636 Phosphotransferase enzyme family RR32_01305 PF00313 'Cold-shock' DNA-binding domain RR32_01305 PF06961 RR32_01305 RR32_01315 PF00892 EamA-like transporter family RR32_01320 PF01381 Helix-turn-helix RR32_01320 PF07883 Cupin domain RR32_01325 PF00005 ABC transporter RR32_01325 PF00664 ABC transporter transmembrane region RR32_01330 PF00977 Histidine biosynthesis protein RR32_01335 PF01612 3'-5' exonuclease RR32_01340 PF05656 RR32_01340 RR32_01345 PF00117 Glutamine amidotransferase class-I RR32_01350 PF00475 Imidazoleglycerol-phosphate dehydratase RR32_01355 PF12568 Acetyltransferase (GNAT) domain RR32_01370 PF00583 Acetyltransferase (GNAT) family RR32_01375 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RR32_01375 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RR32_01380 PF00512 His Kinase A (phospho-acceptor) domain RR32_01380 PF00672 HAMP domain RR32_01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_01385 PF00072 Response regulator receiver domain RR32_01385 PF00486 Transcriptional regulatory protein, C terminal RR32_01390 PF00575 S1 RNA binding domain RR32_01390 PF09371 Tex-like protein N-terminal domain RR32_01390 PF12836 Helix-hairpin-helix motif RR32_01390 PF16921 RR32_01390 RR32_01395 PF00484 Carbonic anhydrase RR32_01395 PF00916 RR32_01395 RR32_01400 PF00106 short chain dehydrogenase RR32_01405 PF01053 Cys/Met metabolism PLP-dependent enzyme RR32_01410 PF00205 Thiamine pyrophosphate enzyme, central domain RR32_01410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RR32_01410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RR32_01415 PF00005 ABC transporter RR32_01415 PF12848 ABC transporter RR32_01420 PF08238 Sel1 repeat RR32_01435 PF04191 Phospholipid methyltransferase RR32_01445 PF02321 Outer membrane efflux protein RR32_01450 PF16576 RR32_01450 RR32_01455 PF00873 AcrB/AcrD/AcrF family RR32_01460 PF01545 Cation efflux family RR32_01480 PF12728 Helix-turn-helix domain RR32_01530 PF00324 Amino acid permease RR32_01545 PF00749 tRNA synthetases class I (E and Q), catalytic domain RR32_01555 PF13531 Bacterial extracellular solute-binding protein RR32_01560 PF01795 MraW methylase family RR32_01565 PF04999 RR32_01565 RR32_01570 PF00905 Penicillin binding protein transpeptidase domain RR32_01570 PF03717 Penicillin-binding Protein dimerisation domain RR32_01575 PF02875 Mur ligase family, glutamate ligase domain RR32_01575 PF08245 Mur ligase middle domain RR32_01580 PF01225 Mur ligase family, catalytic domain RR32_01580 PF02875 Mur ligase family, glutamate ligase domain RR32_01580 PF08245 Mur ligase middle domain RR32_01585 PF00953 Glycosyl transferase family 4 RR32_01595 PF13649 Methyltransferase domain RR32_01600 PF00905 Penicillin binding protein transpeptidase domain RR32_01600 PF00912 Transglycosylase RR32_01600 PF17092 RR32_01600 RR32_01605 PF11104 Type IV pilus assembly protein PilM; RR32_01610 PF05137 RR32_01610 RR32_01615 PF04350 Pilus assembly protein, PilO RR32_01620 PF04351 Pilus assembly protein, PilP RR32_01625 PF00263 RR32_01625 RR32_01625 PF03958 Bacterial type II/III secretion system short domain RR32_01625 PF07660 Secretin and TonB N terminus short domain RR32_01625 PF11741 AMIN domain RR32_01630 PF01202 Shikimate kinase RR32_01635 PF01761 3-dehydroquinate synthase RR32_01645 PF00310 Glutamine amidotransferases class-II RR32_01645 PF01493 GXGXG motif RR32_01645 PF01645 Conserved region in glutamate synthase RR32_01645 PF04898 Glutamate synthase central domain RR32_01650 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_01650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RR32_01655 PF10118 RR32_01655 RR32_01660 PF04011 LemA family RR32_01665 PF04536 TLP18 RR32_01670 PF04536 TLP18 RR32_01675 PF00114 Pilin (bacterial filament) RR32_01675 PF07963 Prokaryotic N-terminal methylation motif RR32_01690 PF04932 RR32_01690 RR32_01690 PF11846 RR32_01690 RR32_01690 PF15864 RR32_01690 RR32_01695 PF00210 Ferritin-like domain RR32_01700 PF04324 BFD-like [2Fe-2S] binding domain RR32_01705 PF01042 Endoribonuclease L-PSP RR32_01710 PF02824 TGS domain RR32_01710 PF13328 HD domain RR32_01715 PF01192 RNA polymerase Rpb6 RR32_01720 PF00625 Guanylate kinase RR32_01725 PF02401 LytB protein RR32_01730 PF07963 Prokaryotic N-terminal methylation motif RR32_01735 PF07963 Prokaryotic N-terminal methylation motif RR32_01740 PF07963 Prokaryotic N-terminal methylation motif RR32_01740 PF16074 RR32_01740 RR32_01750 PF05567 Neisseria PilC beta-propeller domain RR32_01755 PF07963 Prokaryotic N-terminal methylation motif RR32_01755 PF16732 RR32_01755 RR32_01760 PF07963 Prokaryotic N-terminal methylation motif RR32_01760 PF16732 RR32_01760 RR32_01765 PF00886 Ribosomal protein S16 RR32_01770 PF01782 RimM N-terminal domain RR32_01770 PF05239 PRC-barrel domain RR32_01775 PF01746 tRNA (Guanine-1)-methyltransferase RR32_01780 PF01245 Ribosomal protein L19 RR32_01785 PF00561 alpha/beta hydrolase fold RR32_01790 PF03280 Proteobacterial lipase chaperone protein RR32_01795 PF01509 TruB family pseudouridylate synthase (N terminal domain) RR32_01795 PF09157 Pseudouridine synthase II TruB, C-terminal RR32_01795 PF16198 RR32_01795 RR32_01800 PF01925 RR32_01800 RR32_01805 PF01814 Hemerythrin HHE cation binding domain RR32_01810 PF00892 EamA-like transporter family RR32_01815 PF00892 EamA-like transporter family RR32_01820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RR32_01820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RR32_01825 PF01565 FAD binding domain RR32_01825 PF02913 FAD linked oxidases, C-terminal domain RR32_01840 PF03992 Antibiotic biosynthesis monooxygenase RR32_01845 PF02525 Flavodoxin-like fold RR32_01855 PF07690 Major Facilitator Superfamily RR32_01860 PF12805 RR32_01860 RR32_01860 PF13515 RR32_01860 RR32_01865 PF00080 Copper/zinc superoxide dismutase (SODC) RR32_01870 PF01594 RR32_01870 RR32_01875 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RR32_01880 PF10107 RR32_01880 RR32_01895 PF08241 Methyltransferase domain RR32_01905 PF00324 Amino acid permease RR32_01910 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RR32_01910 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RR32_01915 PF00202 Aminotransferase class-III RR32_01920 PF04958 Arginine N-succinyltransferase beta subunit RR32_01925 PF00171 Aldehyde dehydrogenase family RR32_01930 PF04996 Succinylarginine dihydrolase RR32_01935 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RR32_01950 PF00082 Subtilase family RR32_01965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_01965 PF03466 LysR substrate binding domain RR32_01970 PF00892 EamA-like transporter family RR32_01975 PF03795 YCII-related domain RR32_01980 PF02092 RR32_01980 RR32_01980 PF05746 DALR anticodon binding domain RR32_01985 PF02091 Glycyl-tRNA synthetase alpha subunit RR32_01995 PF07007 Protein of unknown function (DUF1311) RR32_02005 PF13566 RR32_02005 RR32_02010 PF00571 CBS domain RR32_02010 PF04982 RR32_02010 RR32_02015 PF04024 RR32_02015 RR32_02025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_02025 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_02025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_02025 PF12418 RR32_02025 RR32_02025 PF12806 RR32_02025 RR32_02035 PF01488 Shikimate / quinate 5-dehydrogenase RR32_02035 PF08501 Shikimate dehydrogenase substrate binding domain RR32_02040 PF01218 Coproporphyrinogen III oxidase RR32_02045 PF00925 GTP cyclohydrolase II RR32_02050 PF02779 Transketolase, pyrimidine binding domain RR32_02050 PF02780 Transketolase, C-terminal domain RR32_02050 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RR32_02055 PF00459 Inositol monophosphatase family RR32_02060 PF00270 DEAD/DEAH box helicase RR32_02060 PF00271 Helicase conserved C-terminal domain RR32_02070 PF00005 ABC transporter RR32_02075 PF02405 RR32_02075 RR32_02080 PF02470 RR32_02080 RR32_02085 PF05494 Toluene tolerance, Ttg2 RR32_02090 PF13466 STAS domain RR32_02095 PF01544 CorA-like Mg2+ transporter protein RR32_02100 PF03641 Possible lysine decarboxylase RR32_02105 PF00293 NUDIX domain RR32_02110 PF00156 Phosphoribosyl transferase domain RR32_02115 PF00270 DEAD/DEAH box helicase RR32_02115 PF00271 Helicase conserved C-terminal domain RR32_02115 PF17191 RR32_02115 RR32_02120 PF13460 NADH(P)-binding RR32_02130 PF01553 Acyltransferase RR32_02135 PF13622 Thioesterase-like superfamily RR32_02140 PF00375 Sodium:dicarboxylate symporter family RR32_02145 PF10118 RR32_02145 RR32_02150 PF01926 50S ribosome-binding GTPase RR32_02155 PF02082 Transcriptional regulator RR32_02160 PF00042 Globin RR32_02165 PF05872 RR32_02165 RR32_02170 PF01053 Cys/Met metabolism PLP-dependent enzyme RR32_02175 PF00117 Glutamine amidotransferase class-I RR32_02180 PF00338 Ribosomal protein S10p/S20e RR32_02185 PF00297 Ribosomal protein L3 RR32_02190 PF00573 Ribosomal protein L4/L1 family RR32_02195 PF00276 Ribosomal protein L23 RR32_02200 PF00181 Ribosomal Proteins L2, RNA binding domain RR32_02200 PF03947 Ribosomal Proteins L2, C-terminal domain RR32_02205 PF00203 Ribosomal protein S19 RR32_02210 PF00237 Ribosomal protein L22p/L17e RR32_02215 PF00189 Ribosomal protein S3, C-terminal domain RR32_02215 PF07650 KH domain RR32_02220 PF00252 Ribosomal protein L16p/L10e RR32_02225 PF00831 Ribosomal L29 protein RR32_02230 PF00366 Ribosomal protein S17 RR32_02235 PF00238 Ribosomal protein L14p/L23e RR32_02240 PF00467 KOW motif RR32_02240 PF17136 RR32_02240 RR32_02245 PF00281 Ribosomal protein L5 RR32_02245 PF00673 ribosomal L5P family C-terminus RR32_02250 PF00253 Ribosomal protein S14p/S29e RR32_02255 PF00410 Ribosomal protein S8 RR32_02260 PF00347 Ribosomal protein L6 RR32_02265 PF00861 Ribosomal L18p/L5e family RR32_02270 PF00333 Ribosomal protein S5, N-terminal domain RR32_02270 PF03719 Ribosomal protein S5, C-terminal domain RR32_02275 PF00327 Ribosomal protein L30p/L7e RR32_02280 PF00828 Ribosomal protein L18e/L15 RR32_02285 PF00344 SecY translocase RR32_02290 PF00444 Ribosomal protein L36 RR32_02295 PF00416 Ribosomal protein S13/S18 RR32_02300 PF00411 Ribosomal protein S11 RR32_02305 PF00163 Ribosomal protein S4/S9 N-terminal domain RR32_02305 PF01479 S4 domain RR32_02310 PF01000 RNA polymerase Rpb3/RpoA insert domain RR32_02310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RR32_02310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RR32_02315 PF01196 Ribosomal protein L17 RR32_02320 PF00743 Flavin-binding monooxygenase-like RR32_02320 PF13450 NAD(P)-binding Rossmann-like domain RR32_02325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_02325 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_02325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_02330 PF03937 Flavinator of succinate dehydrogenase RR32_02345 PF01694 Rhomboid family RR32_02350 PF06808 RR32_02350 RR32_02360 PF09526 RR32_02360 RR32_02365 PF01432 Peptidase family M3 RR32_02370 PF00575 S1 RNA binding domain RR32_02370 PF00773 RNB domain RR32_02370 PF08206 Ribonuclease B OB domain RR32_02390 PF12710 haloacid dehalogenase-like hydrolase RR32_02405 PF00881 Nitroreductase family RR32_02415 PF01557 Fumarylacetoacetate (FAA) hydrolase family RR32_02420 PF02311 AraC-like ligand binding domain RR32_02420 PF12833 Helix-turn-helix domain RR32_02425 PF00892 EamA-like transporter family RR32_02430 PF03631 RR32_02430 RR32_02435 PF03358 NADPH-dependent FMN reductase RR32_02445 PF11306 Protein of unknown function (DUF3108) RR32_02455 PF03544 Gram-negative bacterial TonB protein C-terminal RR32_02460 PF02130 Uncharacterized protein family UPF0054 RR32_02465 PF02562 PhoH-like protein RR32_02470 PF00919 Uncharacterized protein family UPF0004 RR32_02470 PF01938 TRAM domain RR32_02470 PF04055 Radical SAM superfamily RR32_02475 PF01464 Transglycosylase SLT domain RR32_02480 PF00445 Ribonuclease T2 family RR32_02485 PF00056 lactate/malate dehydrogenase, NAD binding domain RR32_02485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RR32_02490 PF10982 Protein of unknown function (DUF2789) RR32_02500 PF13640 2OG-Fe(II) oxygenase superfamily RR32_02505 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ RR32_02510 PF01066 CDP-alcohol phosphatidyltransferase RR32_02545 PF04828 Glutathione-dependent formaldehyde-activating enzyme RR32_02550 PF14066 RR32_02550 RR32_02555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_02555 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_02555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_02560 PF00440 Bacterial regulatory proteins, tetR family RR32_02565 PF07287 RR32_02565 RR32_02570 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_02575 PF01039 Carboxyl transferase domain RR32_02580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_02580 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_02580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_02585 PF00378 Enoyl-CoA hydratase/isomerase family RR32_02590 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RR32_02590 PF00364 Biotin-requiring enzyme RR32_02590 PF02785 Biotin carboxylase C-terminal domain RR32_02590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RR32_02595 PF03259 Roadblock/LC7 domain RR32_02600 PF00071 Ras family RR32_02620 PF04386 Stringent starvation protein B RR32_02625 PF02798 Glutathione S-transferase, N-terminal domain RR32_02630 PF00380 Ribosomal protein S9/S16 RR32_02635 PF00572 Ribosomal protein L13 RR32_02640 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RR32_02645 PF00398 Ribosomal RNA adenine dimethylase RR32_02650 PF00149 Calcineurin-like phosphoesterase RR32_02655 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) RR32_02660 PF04172 RR32_02660 RR32_02670 PF01926 50S ribosome-binding GTPase RR32_02670 PF13167 RR32_02670 RR32_02670 PF16360 RR32_02670 RR32_02675 PF01553 Acyltransferase RR32_02680 PF13091 PLD-like domain RR32_02685 PF00149 Calcineurin-like phosphoesterase RR32_02690 PF00691 OmpA family RR32_02695 PF00990 GGDEF domain RR32_02695 PF17152 RR32_02695 RR32_02700 PF13689 RR32_02700 RR32_02730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RR32_02730 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_02740 PF04273 Putative phosphatase (DUF442) RR32_02745 PF12146 Putative lysophospholipase RR32_02750 PF00085 Thioredoxin RR32_02755 PF03061 Thioesterase superfamily RR32_02760 PF07366 SnoaL-like polyketide cyclase RR32_02765 PF14539 Domain of unknown function (DUF4442) RR32_02770 PF04461 Protein of unknown function (DUF520) RR32_02775 PF00581 Rhodanese-like domain RR32_02780 PF01266 FAD dependent oxidoreductase RR32_02780 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RR32_02790 PF03795 YCII-related domain RR32_02795 PF04279 RR32_02795 RR32_02800 PF02811 PHP domain RR32_02805 PF01062 RR32_02805 RR32_02810 PF04002 RadC-like JAB domain RR32_02815 PF02441 Flavoprotein RR32_02815 PF04127 DNA / pantothenate metabolism flavoprotein RR32_02820 PF02355 Protein export membrane protein RR32_02820 PF07549 SecD/SecF GG Motif RR32_02825 PF02355 Protein export membrane protein RR32_02825 PF07549 SecD/SecF GG Motif RR32_02825 PF13721 SecD export protein N-terminal TM region RR32_02830 PF02699 Preprotein translocase subunit RR32_02835 PF01702 Queuine tRNA-ribosyltransferase RR32_02840 PF04011 LemA family RR32_02850 PF02547 Queuosine biosynthesis protein RR32_02860 PF00512 His Kinase A (phospho-acceptor) domain RR32_02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_02865 PF03710 Glutamate-ammonia ligase adenylyltransferase RR32_02865 PF08335 GlnD PII-uridylyltransferase RR32_02870 PF01063 Aminotransferase class IV RR32_02875 PF06258 RR32_02875 RR32_02880 PF01522 Polysaccharide deacetylase RR32_02885 PF00534 Glycosyl transferases group 1 RR32_02885 PF13439 Glycosyltransferase Family 4 RR32_02890 PF06258 RR32_02890 RR32_02895 PF00534 Glycosyl transferases group 1 RR32_02895 PF13439 Glycosyltransferase Family 4 RR32_02900 PF00535 Glycosyl transferase family 2 RR32_02905 PF00534 Glycosyl transferases group 1 RR32_02915 PF00152 tRNA synthetases class II (D, K and N) RR32_02915 PF01336 OB-fold nucleic acid binding domain RR32_02915 PF02938 GAD domain RR32_02920 PF13803 RR32_02920 RR32_02925 PF00593 TonB dependent receptor RR32_02925 PF07715 TonB-dependent Receptor Plug Domain RR32_02930 PF13091 PLD-like domain RR32_02940 PF11776 Domain of unknown function (DUF3315) RR32_02945 PF06146 RR32_02945 RR32_02950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_02950 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_02950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_02950 PF12418 RR32_02950 RR32_02950 PF12806 RR32_02950 RR32_02955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_02955 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_02955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_02955 PF12418 RR32_02955 RR32_02955 PF12806 RR32_02955 RR32_02965 PF00512 His Kinase A (phospho-acceptor) domain RR32_02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_02970 PF00072 Response regulator receiver domain RR32_02970 PF00486 Transcriptional regulatory protein, C terminal RR32_02975 PF02696 RR32_02975 RR32_02980 PF00487 RR32_02980 RR32_02985 PF03724 META domain RR32_02990 PF03009 Glycerophosphoryl diester phosphodiesterase family RR32_02995 PF01923 Cobalamin adenosyltransferase RR32_03000 PF00593 TonB dependent receptor RR32_03000 PF07715 TonB-dependent Receptor Plug Domain RR32_03005 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RR32_03010 PF00291 Pyridoxal-phosphate dependent enzyme RR32_03015 PF07566 Domain of Unknown Function (DUF1543) RR32_03025 PF10974 RR32_03025 RR32_03030 PF10118 RR32_03030 RR32_03035 PF12625 RR32_03035 RR32_03035 PF12833 Helix-turn-helix domain RR32_03040 PF00290 Tryptophan synthase alpha chain RR32_03045 PF01039 Carboxyl transferase domain RR32_03050 PF02875 Mur ligase family, glutamate ligase domain RR32_03050 PF08245 Mur ligase middle domain RR32_03055 PF05036 Sporulation related domain RR32_03060 PF03162 Tyrosine phosphatase family RR32_03065 PF00753 Metallo-beta-lactamase superfamily RR32_03070 PF00578 AhpC/TSA family RR32_03070 PF10417 C-terminal domain of 1-Cys peroxiredoxin RR32_03075 PF01043 SecA preprotein cross-linking domain RR32_03075 PF02810 SEC-C motif RR32_03075 PF07516 SecA Wing and Scaffold domain RR32_03075 PF07517 SecA DEAD-like domain RR32_03085 PF00083 Sugar (and other) transporter RR32_03090 PF03006 RR32_03090 RR32_03095 PF13679 RR32_03095 RR32_03100 PF13673 Acetyltransferase (GNAT) domain RR32_03105 PF01734 Patatin-like phospholipase RR32_03115 PF00378 Enoyl-CoA hydratase/isomerase family RR32_03115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RR32_03115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RR32_03120 PF00108 Thiolase, N-terminal domain RR32_03120 PF02803 Thiolase, C-terminal domain RR32_03125 PF12625 RR32_03125 RR32_03125 PF12833 Helix-turn-helix domain RR32_03130 PF02515 CoA-transferase family III RR32_03135 PF04966 Carbohydrate-selective porin, OprB family RR32_03140 PF01011 PQQ enzyme repeat RR32_03140 PF13360 PQQ-like domain RR32_03145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RR32_03145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RR32_03150 PF06073 RR32_03150 RR32_03155 PF00893 Small Multidrug Resistance protein RR32_03160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RR32_03165 PF00108 Thiolase, N-terminal domain RR32_03165 PF02803 Thiolase, C-terminal domain RR32_03170 PF12019 Type II transport protein GspH RR32_03175 PF00691 OmpA family RR32_03175 PF13505 Outer membrane protein beta-barrel domain RR32_03185 PF01139 tRNA-splicing ligase RtcB RR32_03190 PF00324 Amino acid permease RR32_03195 PF05175 Methyltransferase small domain RR32_03195 PF08468 Methyltransferase small domain N-terminal RR32_03200 PF00860 Permease family RR32_03205 PF00009 Elongation factor Tu GTP binding domain RR32_03205 PF00679 Elongation factor G C-terminus RR32_03205 PF03144 Elongation factor Tu domain 2 RR32_03210 PF01741 Large-conductance mechanosensitive channel, MscL RR32_03215 PF06094 AIG2-like family RR32_03220 PF00639 PPIC-type PPIASE domain RR32_03225 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RR32_03225 PF06827 Zinc finger found in FPG and IleRS RR32_03225 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RR32_03230 PF02245 Methylpurine-DNA glycosylase (MPG) RR32_03235 PF00593 TonB dependent receptor RR32_03235 PF07715 TonB-dependent Receptor Plug Domain RR32_03240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RR32_03245 PF03547 RR32_03245 RR32_03250 PF08238 Sel1 repeat RR32_03255 PF10411 Disulfide bond isomerase protein N-terminus RR32_03255 PF13098 Thioredoxin-like domain RR32_03260 PF01571 Aminomethyltransferase folate-binding domain RR32_03265 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RR32_03270 PF04343 RR32_03270 RR32_03275 PF03831 PhnA protein RR32_03275 PF08274 PhnA Zinc-Ribbon RR32_03280 PF07411 Domain of unknown function (DUF1508) RR32_03285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RR32_03285 PF03129 Anticodon binding domain RR32_03285 PF04073 Aminoacyl-tRNA editing domain RR32_03290 PF00873 AcrB/AcrD/AcrF family RR32_03295 PF13437 HlyD family secretion protein RR32_03295 PF13533 Biotin-lipoyl like RR32_03305 PF00072 Response regulator receiver domain RR32_03310 PF00072 Response regulator receiver domain RR32_03315 PF01584 CheW-like domain RR32_03320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RR32_03325 PF00072 Response regulator receiver domain RR32_03325 PF01584 CheW-like domain RR32_03325 PF01627 Hpt domain RR32_03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_03335 PF01546 Peptidase family M20/M25/M40 RR32_03335 PF07687 Peptidase dimerisation domain RR32_03340 PF08085 RR32_03340 RR32_03345 PF08907 RR32_03345 RR32_03350 PF04304 RR32_03350 RR32_03355 PF03734 L,D-transpeptidase catalytic domain RR32_03390 PF02698 DUF218 domain RR32_03395 PF00175 Oxidoreductase NAD-binding domain RR32_03395 PF00258 Flavodoxin RR32_03395 PF03929 RR32_03395 RR32_03400 PF14317 RR32_03400 RR32_03405 PF12805 RR32_03405 RR32_03405 PF13515 RR32_03405 RR32_03410 PF07690 Major Facilitator Superfamily RR32_03415 PF00881 Nitroreductase family RR32_03425 PF01235 RR32_03425 RR32_03430 PF01734 Patatin-like phospholipase RR32_03435 PF00291 Pyridoxal-phosphate dependent enzyme RR32_03440 PF05992 RR32_03440 RR32_03445 PF16142 RR32_03445 RR32_03450 PF06674 RR32_03450 RR32_03460 PF01965 DJ-1/PfpI family RR32_03470 PF02637 GatB domain RR32_03470 PF02934 GatB/GatE catalytic domain RR32_03475 PF01425 Amidase RR32_03480 PF02686 Glu-tRNAGln amidotransferase C subunit RR32_03485 PF06723 MreB/Mbl protein RR32_03490 PF04085 rod shape-determining protein MreC RR32_03495 PF04093 RR32_03495 RR32_03500 PF02545 Maf-like protein RR32_03505 PF00575 S1 RNA binding domain RR32_03505 PF10150 Ribonuclease E/G family RR32_03515 PF03007 RR32_03515 RR32_03515 PF06974 RR32_03515 RR32_03520 PF01507 Phosphoadenosine phosphosulfate reductase family RR32_03525 PF12710 haloacid dehalogenase-like hydrolase RR32_03530 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) RR32_03535 PF02525 Flavodoxin-like fold RR32_03540 PF12625 RR32_03540 RR32_03540 PF12833 Helix-turn-helix domain RR32_03545 PF00487 RR32_03545 RR32_03550 PF08223 PaaX-like protein C-terminal domain RR32_03555 PF02673 RR32_03555 RR32_03560 PF06719 RR32_03560 RR32_03560 PF12833 Helix-turn-helix domain RR32_03565 PF00107 Zinc-binding dehydrogenase RR32_03565 PF08240 Alcohol dehydrogenase GroES-like domain RR32_03570 PF01965 DJ-1/PfpI family RR32_03575 PF00145 C-5 cytosine-specific DNA methylase RR32_03585 PF03235 RR32_03585 RR32_03590 PF11112 RR32_03590 RR32_03600 PF05930 Prophage CP4-57 regulatory protein (AlpA) RR32_03635 PF00772 DnaB-like helicase N terminal domain RR32_03635 PF03796 DnaB-like helicase C terminal domain RR32_03640 PF13730 RR32_03640 RR32_03655 PF03374 RR32_03655 RR32_03675 PF04244 Deoxyribodipyrimidine photo-lyase-related protein RR32_03680 PF00293 NUDIX domain RR32_03680 PF09297 NADH pyrophosphatase zinc ribbon domain RR32_03685 PF00324 Amino acid permease RR32_03690 PF04303 PrpF protein RR32_03695 PF00348 Polyprenyl synthetase RR32_03700 PF04237 YjbR RR32_03705 PF01145 SPFH domain / Band 7 family RR32_03710 PF01957 NfeD-like C-terminal, partner-binding RR32_03715 PF01734 Patatin-like phospholipase RR32_03720 PF01553 Acyltransferase RR32_03725 PF13000 RR32_03725 RR32_03735 PF00884 Sulfatase RR32_03735 PF08019 RR32_03735 RR32_03740 PF00072 Response regulator receiver domain RR32_03740 PF00486 Transcriptional regulatory protein, C terminal RR32_03745 PF00512 His Kinase A (phospho-acceptor) domain RR32_03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_03750 PF01569 PAP2 superfamily RR32_03755 PF00909 Ammonium Transporter Family RR32_03760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_03760 PF03466 LysR substrate binding domain RR32_03765 PF03547 RR32_03765 RR32_03775 PF13649 Methyltransferase domain RR32_03780 PF00133 tRNA synthetases class I (I, L, M and V) RR32_03780 PF08264 Anticodon-binding domain of tRNA RR32_03780 PF10458 Valyl tRNA synthetase tRNA binding arm RR32_03790 PF00106 short chain dehydrogenase RR32_03795 PF13577 SnoaL-like domain RR32_03800 PF01906 Putative heavy-metal-binding RR32_03805 PF01906 Putative heavy-metal-binding RR32_03810 PF02321 Outer membrane efflux protein RR32_03815 PF00873 AcrB/AcrD/AcrF family RR32_03820 PF00529 HlyD family secretion protein RR32_03820 PF16576 RR32_03820 RR32_03825 PF01569 PAP2 superfamily RR32_03830 PF10136 RR32_03830 RR32_03835 PF00348 Polyprenyl synthetase RR32_03840 PF00829 Ribosomal prokaryotic L21 protein RR32_03845 PF01016 Ribosomal L27 protein RR32_03850 PF03548 Outer membrane lipoprotein carrier protein LolA RR32_03855 PF11738 Protein of unknown function (DUF3298) RR32_03860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RR32_03860 PF02403 Seryl-tRNA synthetase N-terminal domain RR32_03865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RR32_03865 PF10414 Sirohaem synthase dimerisation region RR32_03865 PF13241 Putative NAD(P)-binding RR32_03870 PF00588 SpoU rRNA Methylase family RR32_03875 PF01638 HxlR-like helix-turn-helix RR32_03880 PF12724 Flavodoxin domain RR32_03885 PF00324 Amino acid permease RR32_03890 PF00465 Iron-containing alcohol dehydrogenase RR32_03900 PF03099 Biotin/lipoate A/B protein ligase family RR32_03905 PF04359 Protein of unknown function (DUF493) RR32_03910 PF00140 Sigma-70 factor, region 1 RR32_03910 PF03979 Sigma-70 factor, region 1 RR32_03910 PF04539 Sigma-70 region 3 RR32_03910 PF04542 Sigma-70 region 2 RR32_03910 PF04545 Sigma-70, region 4 RR32_03910 PF04546 Sigma-70, non-essential region RR32_03925 PF03695 Uncharacterised protein family (UPF0149) RR32_03930 PF00581 Rhodanese-like domain RR32_03935 PF06945 RR32_03935 RR32_03940 PF00285 Citrate synthase RR32_03945 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RR32_03950 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RR32_03955 PF00890 FAD binding domain RR32_03955 PF02910 Fumarate reductase flavoprotein C-term RR32_03960 PF13085 2Fe-2S iron-sulfur cluster binding domain RR32_03960 PF13534 4Fe-4S dicluster domain RR32_03965 PF00676 Dehydrogenase E1 component RR32_03965 PF02779 Transketolase, pyrimidine binding domain RR32_03965 PF16078 RR32_03965 RR32_03965 PF16870 RR32_03965 RR32_03970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RR32_03970 PF00364 Biotin-requiring enzyme RR32_03970 PF02817 e3 binding domain RR32_03975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RR32_03975 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_03980 PF00549 CoA-ligase RR32_03980 PF08442 ATP-grasp domain RR32_03985 PF00549 CoA-ligase RR32_03985 PF02629 CoA binding domain RR32_03990 PF00579 tRNA synthetases class I (W and Y) RR32_03995 PF05661 RR32_03995 RR32_04000 PF04228 RR32_04000 RR32_04005 PF00999 Sodium/hydrogen exchanger family RR32_04020 PF09587 Bacterial capsule synthesis protein PGA_cap RR32_04030 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RR32_04040 PF00582 Universal stress protein family RR32_04045 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_04050 PF01042 Endoribonuclease L-PSP RR32_04055 PF00440 Bacterial regulatory proteins, tetR family RR32_04060 PF01272 Transcription elongation factor, GreA/GreB, C-term RR32_04060 PF03449 Transcription elongation factor, N-terminal RR32_04065 PF02142 MGS-like domain RR32_04065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RR32_04065 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RR32_04070 PF00117 Glutamine amidotransferase class-I RR32_04070 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RR32_04090 PF01985 CRS1 / YhbY (CRM) domain RR32_04095 PF01728 FtsJ-like methyltransferase RR32_04100 PF00004 ATPase family associated with various cellular activities (AAA) RR32_04100 PF01434 Peptidase family M41 RR32_04100 PF06480 FtsH Extracellular RR32_04105 PF00809 Pterin binding enzyme RR32_04125 PF09423 PhoD-like phosphatase RR32_04125 PF16655 RR32_04125 RR32_04140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RR32_04140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RR32_04145 PF06325 Ribosomal protein L11 methyltransferase (PrmA) RR32_04155 PF00083 Sugar (and other) transporter RR32_04160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RR32_04160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RR32_04165 PF01266 FAD dependent oxidoreductase RR32_04165 PF16901 RR32_04165 RR32_04170 PF00821 Phosphoenolpyruvate carboxykinase RR32_04170 PF17297 RR32_04170 RR32_04175 PF00781 Diacylglycerol kinase catalytic domain RR32_04180 PF00149 Calcineurin-like phosphoesterase RR32_04185 PF00166 Chaperonin 10 Kd subunit RR32_04190 PF00118 TCP-1/cpn60 chaperonin family RR32_04195 PF01219 Prokaryotic diacylglycerol kinase RR32_04200 PF00753 Metallo-beta-lactamase superfamily RR32_04210 PF00873 AcrB/AcrD/AcrF family RR32_04215 PF13430 RR32_04215 RR32_04220 PF01435 Peptidase family M48 RR32_04225 PF01464 Transglycosylase SLT domain RR32_04230 PF01171 PP-loop family RR32_04235 PF02036 SCP-2 sterol transfer family RR32_04240 PF00497 Bacterial extracellular solute-binding proteins, family 3 RR32_04240 PF01464 Transglycosylase SLT domain RR32_04245 PF01272 Transcription elongation factor, GreA/GreB, C-term RR32_04245 PF03449 Transcription elongation factor, N-terminal RR32_04255 PF00589 Phage integrase family RR32_04255 PF13356 Domain of unknown function (DUF4102) RR32_04260 PF05930 Prophage CP4-57 regulatory protein (AlpA) RR32_04280 PF00665 Integrase core domain RR32_04290 PF11726 RR32_04290 RR32_04320 PF06067 RR32_04320 RR32_04325 PF09588 YqaJ-like viral recombinase domain RR32_04335 PF00872 RR32_04335 RR32_04350 PF02321 Outer membrane efflux protein RR32_04355 PF16576 RR32_04355 RR32_04360 PF00873 AcrB/AcrD/AcrF family RR32_04370 PF13795 RR32_04370 RR32_04380 PF07690 Major Facilitator Superfamily RR32_04385 PF02583 Metal-sensitive transcriptional repressor RR32_04390 PF01545 Cation efflux family RR32_04400 PF00665 Integrase core domain RR32_04405 PF00753 Metallo-beta-lactamase superfamily RR32_04405 PF14863 Alkyl sulfatase dimerisation RR32_04405 PF14864 Alkyl sulfatase C-terminal RR32_04415 PF00665 Integrase core domain RR32_04420 PF02417 RR32_04420 RR32_04425 PF09828 RR32_04425 RR32_04430 PF13676 TIR domain RR32_04440 PF14534 Domain of unknown function (DUF4440) RR32_04445 PF00501 AMP-binding enzyme RR32_04445 PF13193 AMP-binding enzyme C-terminal domain RR32_04450 PF13527 Acetyltransferase (GNAT) domain RR32_04455 PF09857 RR32_04455 RR32_04475 PF05168 HEPN domain RR32_04490 PF00440 Bacterial regulatory proteins, tetR family RR32_04495 PF00440 Bacterial regulatory proteins, tetR family RR32_04500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RR32_04505 PF12697 Alpha/beta hydrolase family RR32_04510 PF00561 alpha/beta hydrolase fold RR32_04515 PF00561 alpha/beta hydrolase fold RR32_04520 PF00440 Bacterial regulatory proteins, tetR family RR32_04520 PF14246 AefR-like transcriptional repressor, C-terminal region RR32_04525 PF00529 HlyD family secretion protein RR32_04525 PF16576 RR32_04525 RR32_04530 PF00873 AcrB/AcrD/AcrF family RR32_04535 PF00881 Nitroreductase family RR32_04540 PF00106 short chain dehydrogenase RR32_04545 PF00440 Bacterial regulatory proteins, tetR family RR32_04550 PF02595 Glycerate kinase family RR32_04555 PF00384 Molybdopterin oxidoreductase RR32_04555 PF01568 Molydopterin dinucleotide binding domain RR32_04560 PF02634 FdhD/NarQ family RR32_04565 PF06803 RR32_04565 RR32_04570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RR32_04570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RR32_04570 PF11890 Domain of unknown function (DUF3410) RR32_04575 PF00152 tRNA synthetases class II (D, K and N) RR32_04580 PF04280 Tim44-like domain RR32_04585 PF06745 KaiC RR32_04585 PF13541 Subunit ChlI of Mg-chelatase RR32_04590 PF00324 Amino acid permease RR32_04595 PF00324 Amino acid permease RR32_04605 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RR32_04605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RR32_04610 PF01678 Diaminopimelate epimerase RR32_04615 PF03747 ADP-ribosylglycohydrolase RR32_04625 PF01810 RR32_04625 RR32_04630 PF00589 Phage integrase family RR32_04630 PF02899 Phage integrase, N-terminal SAM-like domain RR32_04635 PF01012 Electron transfer flavoprotein domain RR32_04640 PF00766 Electron transfer flavoprotein FAD-binding domain RR32_04640 PF01012 Electron transfer flavoprotein domain RR32_04645 PF12833 Helix-turn-helix domain RR32_04650 PF00753 Metallo-beta-lactamase superfamily RR32_04655 PF00521 DNA gyrase/topoisomerase IV, subunit A RR32_04655 PF03989 DNA gyrase C-terminal domain, beta-propeller RR32_04660 PF13231 RR32_04660 RR32_04665 PF04138 RR32_04665 RR32_04670 PF00535 Glycosyl transferase family 2 RR32_04675 PF04794 YdjC-like protein RR32_04680 PF12698 ABC-2 family transporter protein RR32_04685 PF12698 ABC-2 family transporter protein RR32_04690 PF16576 RR32_04690 RR32_04695 PF02321 Outer membrane efflux protein RR32_04700 PF00266 Aminotransferase class-V RR32_04710 PF02639 RR32_04710 RR32_04715 PF00892 EamA-like transporter family RR32_04720 PF02687 RR32_04720 RR32_04720 PF12704 MacB-like periplasmic core domain RR32_04725 PF00005 ABC transporter RR32_04730 PF00753 Metallo-beta-lactamase superfamily RR32_04730 PF03772 RR32_04730 RR32_04730 PF13567 RR32_04730 RR32_04735 PF03279 RR32_04735 RR32_04740 PF01343 Peptidase family S49 RR32_04745 PF12697 Alpha/beta hydrolase family RR32_04750 PF00551 Formyl transferase RR32_04755 PF00586 AIR synthase related protein, N-terminal domain RR32_04755 PF02769 AIR synthase related protein, C-terminal domain RR32_04760 PF01594 RR32_04760 RR32_04765 PF00308 Bacterial dnaA protein RR32_04780 PF11304 RR32_04780 RR32_04790 PF04542 Sigma-70 region 2 RR32_04790 PF08281 Sigma-70, region 4 RR32_04795 PF00588 SpoU rRNA Methylase family RR32_04800 PF00316 Fructose-1-6-bisphosphatase RR32_04810 PF00691 OmpA family RR32_04815 PF04052 TolB amino-terminal domain RR32_04815 PF07676 WD40-like Beta Propeller Repeat RR32_04820 PF13103 TonB C terminal RR32_04825 PF02472 Biopolymer transport protein ExbD/TolR RR32_04830 PF01618 RR32_04830 RR32_04835 PF03061 Thioesterase superfamily RR32_04840 PF01546 Peptidase family M20/M25/M40 RR32_04840 PF07687 Peptidase dimerisation domain RR32_04845 PF05491 Holliday junction DNA helicase ruvB C-terminus RR32_04845 PF05496 Holliday junction DNA helicase ruvB N-terminus RR32_04850 PF01330 RuvA N terminal domain RR32_04850 PF07499 RuvA, C-terminal domain RR32_04850 PF14520 Helix-hairpin-helix domain RR32_04855 PF01966 HD domain RR32_04860 PF02769 AIR synthase related protein, C-terminal domain RR32_04860 PF13507 CobB/CobQ-like glutamine amidotransferase domain RR32_04865 PF07690 Major Facilitator Superfamily RR32_04890 PF00378 Enoyl-CoA hydratase/isomerase family RR32_04895 PF01467 Cytidylyltransferase RR32_04905 PF00188 Cysteine-rich secretory protein family RR32_04910 PF00578 AhpC/TSA family RR32_04915 PF01902 ATP-binding region RR32_04925 PF06508 Queuosine biosynthesis protein QueC RR32_04930 PF04055 Radical SAM superfamily RR32_04930 PF13394 4Fe-4S single cluster domain RR32_04935 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_04935 PF14602 Hexapeptide repeat of succinyl-transferase RR32_04935 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RR32_04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_04945 PF03466 LysR substrate binding domain RR32_04950 PF00005 ABC transporter RR32_04950 PF12857 RR32_04950 RR32_04955 PF00528 Binding-protein-dependent transport system inner membrane component RR32_04960 PF00528 Binding-protein-dependent transport system inner membrane component RR32_04965 PF06821 Serine hydrolase RR32_04970 PF13531 Bacterial extracellular solute-binding protein RR32_04975 PF01063 Aminotransferase class IV RR32_04980 PF02618 YceG-like family RR32_04985 PF02223 Thymidylate kinase RR32_04990 PF03061 Thioesterase superfamily RR32_04995 PF00890 FAD binding domain RR32_04995 PF02910 Fumarate reductase flavoprotein C-term RR32_05000 PF13180 PDZ domain RR32_05000 PF13365 Trypsin-like peptidase domain RR32_05005 PF13279 Thioesterase-like superfamily RR32_05010 PF13302 Acetyltransferase (GNAT) domain RR32_05015 PF00009 Elongation factor Tu GTP binding domain RR32_05015 PF00679 Elongation factor G C-terminus RR32_05015 PF03144 Elongation factor Tu domain 2 RR32_05015 PF06421 GTP-binding protein LepA C-terminus RR32_05020 PF00717 Peptidase S24-like RR32_05020 PF10502 Signal peptidase, peptidase S26 RR32_05025 PF16137 RR32_05025 RR32_05030 PF00035 Double-stranded RNA binding motif RR32_05030 PF14622 Ribonuclease-III-like RR32_05035 PF01926 50S ribosome-binding GTPase RR32_05035 PF07650 KH domain RR32_05045 PF02565 Recombination protein O C terminal RR32_05045 PF11967 Recombination protein O N terminal RR32_05050 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RR32_05055 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) RR32_05060 PF00106 short chain dehydrogenase RR32_05075 PF03061 Thioesterase superfamily RR32_05080 PF04828 Glutathione-dependent formaldehyde-activating enzyme RR32_05085 PF00155 Aminotransferase class I and II RR32_05095 PF00990 GGDEF domain RR32_05095 PF13188 PAS domain RR32_05095 PF13426 PAS domain RR32_05105 PF00271 Helicase conserved C-terminal domain RR32_05105 PF02151 UvrB/uvrC motif RR32_05105 PF04851 Type III restriction enzyme, res subunit RR32_05105 PF12344 Ultra-violet resistance protein B RR32_05110 PF08212 Lipocalin-like domain RR32_05115 PF00892 EamA-like transporter family RR32_05120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RR32_05120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RR32_05135 PF01018 GTP1/OBG RR32_05135 PF01926 50S ribosome-binding GTPase RR32_05140 PF00696 Amino acid kinase family RR32_05140 PF01472 PUA domain RR32_05145 PF12710 haloacid dehalogenase-like hydrolase RR32_05150 PF07759 RR32_05150 RR32_05155 PF01207 Dihydrouridine synthase (Dus) RR32_05160 PF03060 Nitronate monooxygenase RR32_05165 PF01988 RR32_05165 RR32_05175 PF02350 UDP-N-acetylglucosamine 2-epimerase RR32_05190 PF13641 Glycosyltransferase like family 2 RR32_05205 PF00875 DNA photolyase RR32_05205 PF03441 FAD binding domain of DNA photolyase RR32_05210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RR32_05215 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_05220 PF00768 D-alanyl-D-alanine carboxypeptidase RR32_05225 PF05299 M61 glycyl aminopeptidase RR32_05230 PF03971 Monomeric isocitrate dehydrogenase RR32_05235 PF00849 RNA pseudouridylate synthase RR32_05240 PF00180 Isocitrate/isopropylmalate dehydrogenase RR32_05250 PF06779 RR32_05250 RR32_05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_05255 PF03466 LysR substrate binding domain RR32_05260 PF00375 Sodium:dicarboxylate symporter family RR32_05265 PF02567 Phenazine biosynthesis-like protein RR32_05270 PF00675 Insulinase (Peptidase family M16) RR32_05270 PF05193 Peptidase M16 inactive domain RR32_05275 PF11342 Protein of unknown function (DUF3144) RR32_05285 PF01928 CYTH domain RR32_05285 PF05235 CHAD domain RR32_05290 PF06127 RR32_05290 RR32_05295 PF02581 Thiamine monophosphate synthase/TENI RR32_05300 PF00202 Aminotransferase class-III RR32_05310 PF00849 RNA pseudouridylate synthase RR32_05315 PF00176 SNF2 family N-terminal domain RR32_05315 PF00271 Helicase conserved C-terminal domain RR32_05315 PF12137 RNA polymerase recycling family C-terminal RR32_05320 PF01594 RR32_05320 RR32_05325 PF00440 Bacterial regulatory proteins, tetR family RR32_05330 PF00175 Oxidoreductase NAD-binding domain RR32_05330 PF00970 Oxidoreductase FAD-binding domain RR32_05335 PF00487 RR32_05335 RR32_05340 PF14539 Domain of unknown function (DUF4442) RR32_05345 PF00440 Bacterial regulatory proteins, tetR family RR32_05350 PF04402 Protein of unknown function (DUF541) RR32_05355 PF00202 Aminotransferase class-III RR32_05360 PF00282 Pyridoxal-dependent decarboxylase conserved domain RR32_05365 PF00171 Aldehyde dehydrogenase family RR32_05370 PF01037 AsnC family RR32_05370 PF13404 AsnC-type helix-turn-helix domain RR32_05375 PF00205 Thiamine pyrophosphate enzyme, central domain RR32_05375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RR32_05375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RR32_05380 PF00324 Amino acid permease RR32_05385 PF12849 PBP superfamily domain RR32_05390 PF00528 Binding-protein-dependent transport system inner membrane component RR32_05390 PF12501 RR32_05390 RR32_05395 PF00528 Binding-protein-dependent transport system inner membrane component RR32_05395 PF11812 RR32_05395 RR32_05400 PF00005 ABC transporter RR32_05405 PF01343 Peptidase family S49 RR32_05405 PF08496 RR32_05405 RR32_05410 PF01292 Prokaryotic cytochrome b561 RR32_05420 PF09997 RR32_05420 RR32_05425 PF00206 Lyase RR32_05425 PF08328 Adenylosuccinate lyase C-terminal RR32_05430 PF04356 Protein of unknown function (DUF489) RR32_05435 PF03054 tRNA methyl transferase RR32_05440 PF00293 NUDIX domain RR32_05445 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_05450 PF00768 D-alanyl-D-alanine carboxypeptidase RR32_05450 PF07943 Penicillin-binding protein 5, C-terminal domain RR32_05465 PF01975 Survival protein SurE RR32_05470 PF01476 LysM domain RR32_05470 PF01551 Peptidase family M23 RR32_05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_05475 PF03466 LysR substrate binding domain RR32_05480 PF05362 Lon protease (S16) C-terminal proteolytic domain RR32_05480 PF13654 AAA domain RR32_05485 PF07690 Major Facilitator Superfamily RR32_05490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RR32_05495 PF13593 SBF-like CPA transporter family (DUF4137) RR32_05500 PF01197 Ribosomal protein L31 RR32_05505 PF00563 EAL domain RR32_05515 PF04055 Radical SAM superfamily RR32_05515 PF13394 4Fe-4S single cluster domain RR32_05520 PF01132 Elongation factor P (EF-P) OB domain RR32_05520 PF08207 Elongation factor P (EF-P) KOW-like domain RR32_05520 PF09285 Elongation factor P, C-terminal RR32_05525 PF02554 RR32_05525 RR32_05525 PF13722 RR32_05525 RR32_05530 PF04328 RR32_05530 RR32_05540 PF02789 Cytosol aminopeptidase family, N-terminal domain RR32_05545 PF02423 Ornithine cyclodeaminase/mu-crystallin family RR32_05550 PF00291 Pyridoxal-phosphate dependent enzyme RR32_05555 PF08348 RR32_05555 RR32_05555 PF13309 RR32_05555 RR32_05560 PF02678 Pirin RR32_05565 PF01471 Putative peptidoglycan binding domain RR32_05565 PF03734 L,D-transpeptidase catalytic domain RR32_05570 PF01208 Uroporphyrinogen decarboxylase (URO-D) RR32_05575 PF05675 RR32_05575 RR32_05580 PF11220 RR32_05580 RR32_05585 PF13387 RR32_05585 RR32_05590 PF00144 Beta-lactamase RR32_05595 PF01227 GTP cyclohydrolase I RR32_05600 PF00941 FAD binding domain in molybdopterin dehydrogenase RR32_05600 PF01799 [2Fe-2S] binding domain RR32_05600 PF03450 CO dehydrogenase flavoprotein C-terminal domain RR32_05605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RR32_05605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RR32_05610 PF02625 XdhC and CoxI family RR32_05610 PF13478 XdhC Rossmann domain RR32_05615 PF01713 Smr domain RR32_05620 PF00218 Indole-3-glycerol phosphate synthase RR32_05625 PF00591 Glycosyl transferase family, a/b domain RR32_05625 PF02885 Glycosyl transferase family, helical bundle domain RR32_05630 PF00593 TonB dependent receptor RR32_05630 PF07715 TonB-dependent Receptor Plug Domain RR32_05635 PF01433 Peptidase family M1 RR32_05635 PF11838 ERAP1-like C-terminal domain RR32_05640 PF00117 Glutamine amidotransferase class-I RR32_05645 PF00557 Metallopeptidase family M24 RR32_05645 PF01321 Creatinase/Prolidase N-terminal domain RR32_05645 PF16188 RR32_05645 RR32_05645 PF16189 RR32_05645 RR32_05650 PF00854 POT family RR32_05655 PF00120 Glutamine synthetase, catalytic domain RR32_05655 PF03951 Glutamine synthetase, beta-Grasp domain RR32_05660 PF04345 Chorismate lyase RR32_05665 PF01040 UbiA prenyltransferase family RR32_05670 PF03583 Secretory lipase RR32_05680 PF10881 RR32_05680 RR32_05700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RR32_05700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RR32_05705 PF01784 NIF3 (NGG1p interacting factor 3) RR32_05710 PF13180 PDZ domain RR32_05710 PF13365 Trypsin-like peptidase domain RR32_05715 PF01743 Poly A polymerase head domain RR32_05715 PF12627 Probable RNA and SrmB- binding site of polymerase A RR32_05720 PF00390 Malic enzyme, N-terminal domain RR32_05720 PF01515 Phosphate acetyl/butaryl transferase RR32_05720 PF03949 Malic enzyme, NAD binding domain RR32_05725 PF00563 EAL domain RR32_05725 PF00989 PAS fold RR32_05725 PF00990 GGDEF domain RR32_05725 PF08447 PAS fold RR32_05730 PF04452 RNA methyltransferase RR32_05735 PF02219 Methylenetetrahydrofolate reductase RR32_05740 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RR32_05740 PF05221 S-adenosyl-L-homocysteine hydrolase RR32_05745 PF03412 Peptidase C39 family RR32_05750 PF02627 Carboxymuconolactone decarboxylase family RR32_05755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_05755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_05755 PF09317 RR32_05755 RR32_05760 PF04055 Radical SAM superfamily RR32_05760 PF16881 RR32_05760 RR32_05765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RR32_05765 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_05775 PF07690 Major Facilitator Superfamily RR32_05780 PF07690 Major Facilitator Superfamily RR32_05785 PF03922 OmpW family RR32_05790 PF00557 Metallopeptidase family M24 RR32_05795 PF00318 Ribosomal protein S2 RR32_05800 PF00889 Elongation factor TS RR32_05805 PF11948 RR32_05805 RR32_05810 PF02311 AraC-like ligand binding domain RR32_05810 PF12833 Helix-turn-helix domain RR32_05815 PF03591 RR32_05815 RR32_05820 PF05437 RR32_05820 RR32_05825 PF06127 RR32_05825 RR32_05830 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel RR32_05835 PF13406 Transglycosylase SLT domain RR32_05840 PF01098 RR32_05840 RR32_05850 PF14489 QueF-like protein RR32_05850 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RR32_05855 PF01061 RR32_05855 RR32_05860 PF00005 ABC transporter RR32_05865 PF00589 Phage integrase family RR32_05880 PF00772 DnaB-like helicase N terminal domain RR32_05880 PF03796 DnaB-like helicase C terminal domain RR32_05945 PF06147 RR32_05945 RR32_05980 PF14730 Domain of unknown function (DUF4468) with TBP-like fold RR32_06000 PF05939 RR32_06000 RR32_06010 PF05100 RR32_06010 RR32_06015 PF00877 NlpC/P60 family RR32_06015 PF14464 Prokaryotic homologs of the JAB domain RR32_06030 PF14301 RR32_06030 RR32_06035 PF16082 RR32_06035 RR32_06040 PF00959 Phage lysozyme RR32_06065 PF12843 RR32_06065 RR32_06070 PF03583 Secretory lipase RR32_06075 PF00464 Serine hydroxymethyltransferase RR32_06080 PF02321 Outer membrane efflux protein RR32_06085 PF00873 AcrB/AcrD/AcrF family RR32_06090 PF16576 RR32_06090 RR32_06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_06095 PF03466 LysR substrate binding domain RR32_06100 PF00497 Bacterial extracellular solute-binding proteins, family 3 RR32_06105 PF00528 Binding-protein-dependent transport system inner membrane component RR32_06110 PF00528 Binding-protein-dependent transport system inner membrane component RR32_06115 PF00005 ABC transporter RR32_06120 PF00893 Small Multidrug Resistance protein RR32_06130 PF01136 RR32_06130 RR32_06130 PF16325 RR32_06130 RR32_06135 PF00155 Aminotransferase class I and II RR32_06135 PF00392 Bacterial regulatory proteins, gntR family RR32_06140 PF02567 Phenazine biosynthesis-like protein RR32_06145 PF00175 Oxidoreductase NAD-binding domain RR32_06145 PF00970 Oxidoreductase FAD-binding domain RR32_06150 PF01980 Uncharacterised protein family UPF0066 RR32_06155 PF02308 RR32_06155 RR32_06155 PF13194 RR32_06155 RR32_06160 PF00437 Type II/IV secretion system protein RR32_06160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RR32_06165 PF04076 Bacterial OB fold (BOF) protein RR32_06170 PF00072 Response regulator receiver domain RR32_06170 PF00486 Transcriptional regulatory protein, C terminal RR32_06175 PF00512 His Kinase A (phospho-acceptor) domain RR32_06175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_06180 PF10636 Hemin uptake protein hemP RR32_06185 PF00293 NUDIX domain RR32_06185 PF02581 Thiamine monophosphate synthase/TENI RR32_06195 PF00905 Penicillin binding protein transpeptidase domain RR32_06195 PF00912 Transglycosylase RR32_06195 PF14814 Bifunctional transglycosylase second domain RR32_06200 PF01513 ATP-NAD kinase RR32_06205 PF07023 RR32_06205 RR32_06210 PF00591 Glycosyl transferase family, a/b domain RR32_06210 PF02885 Glycosyl transferase family, helical bundle domain RR32_06215 PF00375 Sodium:dicarboxylate symporter family RR32_06220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_06220 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_06220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_06230 PF00756 Putative esterase RR32_06235 PF00800 Prephenate dehydratase RR32_06235 PF01817 Chorismate mutase type II RR32_06235 PF01842 ACT domain RR32_06240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RR32_06240 PF02153 Prephenate dehydrogenase RR32_06260 PF00665 Integrase core domain RR32_06265 PF03781 Sulfatase-modifying factor enzyme 1 RR32_06270 PF01546 Peptidase family M20/M25/M40 RR32_06275 PF00753 Metallo-beta-lactamase superfamily RR32_06285 PF03883 RR32_06285 RR32_06295 PF05690 Thiazole biosynthesis protein ThiG RR32_06300 PF02597 ThiS family RR32_06305 PF04241 RR32_06305 RR32_06310 PF00140 Sigma-70 factor, region 1 RR32_06310 PF04542 Sigma-70 region 2 RR32_06310 PF04545 Sigma-70, region 4 RR32_06315 PF01206 Sulfurtransferase TusA RR32_06320 PF00313 'Cold-shock' DNA-binding domain RR32_06325 PF00270 DEAD/DEAH box helicase RR32_06325 PF00271 Helicase conserved C-terminal domain RR32_06335 PF00881 Nitroreductase family RR32_06340 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RR32_06340 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RR32_06345 PF00300 Histidine phosphatase superfamily (branch 1) RR32_06350 PF05134 Type II secretion system (T2SS), protein L RR32_06350 PF12693 GspL periplasmic domain RR32_06355 PF04612 Type II secretion system (T2SS), protein M RR32_06360 PF01180 Dihydroorotate dehydrogenase RR32_06365 PF02674 RR32_06365 RR32_06370 PF00156 Phosphoribosyl transferase domain RR32_06370 PF13522 Glutamine amidotransferase domain RR32_06375 PF01435 Peptidase family M48 RR32_06385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RR32_06385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RR32_06390 PF01435 Peptidase family M48 RR32_06395 PF09424 Yqey-like protein RR32_06400 PF01165 Ribosomal protein S21 RR32_06405 PF00814 Glycoprotease family RR32_06415 PF05673 Protein of unknown function (DUF815) RR32_06420 PF01734 Patatin-like phospholipase RR32_06420 PF11815 RR32_06420 RR32_06425 PF00069 Protein kinase domain RR32_06450 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RR32_06450 PF08479 POTRA domain, ShlB-type RR32_06450 PF17287 RR32_06450 RR32_06465 PF00440 Bacterial regulatory proteins, tetR family RR32_06475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_06475 PF03466 LysR substrate binding domain RR32_06480 PF00202 Aminotransferase class-III RR32_06485 PF00171 Aldehyde dehydrogenase family RR32_06490 PF00324 Amino acid permease RR32_06500 PF00665 Integrase core domain RR32_06505 PF09939 RR32_06505 RR32_06515 PF02585 GlcNAc-PI de-N-acetylase RR32_06520 PF05401 Nodulation protein S (NodS) RR32_06525 PF00535 Glycosyl transferase family 2 RR32_06530 PF04076 Bacterial OB fold (BOF) protein RR32_06535 PF04940 Sensors of blue-light using FAD RR32_06545 PF00561 alpha/beta hydrolase fold RR32_06550 PF03616 RR32_06550 RR32_06555 PF00999 Sodium/hydrogen exchanger family RR32_06555 PF02254 TrkA-N domain RR32_06560 PF00106 short chain dehydrogenase RR32_06565 PF13781 RR32_06565 RR32_06570 PF00440 Bacterial regulatory proteins, tetR family RR32_06575 PF05229 RR32_06575 RR32_06580 PF05229 RR32_06580 RR32_06585 PF05229 RR32_06585 RR32_06590 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RR32_06595 PF00577 Outer membrane usher protein RR32_06595 PF13953 PapC C-terminal domain RR32_06600 PF05229 RR32_06600 RR32_06615 PF13302 Acetyltransferase (GNAT) domain RR32_06620 PF14206 RR32_06620 RR32_06625 PF00440 Bacterial regulatory proteins, tetR family RR32_06635 PF00892 EamA-like transporter family RR32_06640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RR32_06640 PF02805 Metal binding domain of Ada RR32_06640 PF12833 Helix-turn-helix domain RR32_06645 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_06650 PF00155 Aminotransferase class I and II RR32_06655 PF02080 TrkA-C domain RR32_06655 PF06826 RR32_06655 RR32_06660 PF14552 Tautomerase enzyme RR32_06665 PF02627 Carboxymuconolactone decarboxylase family RR32_06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_06670 PF03466 LysR substrate binding domain RR32_06675 PF04403 RR32_06675 RR32_06680 PF04403 RR32_06680 RR32_06685 PF02470 RR32_06685 RR32_06690 PF03886 Protein of unknown function (DUF330) RR32_06695 PF00576 HIUase/Transthyretin family RR32_06700 PF03928 Domain of unknown function (DUF336) RR32_06705 PF00072 Response regulator receiver domain RR32_06705 PF00486 Transcriptional regulatory protein, C terminal RR32_06710 PF00512 His Kinase A (phospho-acceptor) domain RR32_06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_06715 PF08212 Lipocalin-like domain RR32_06720 PF00487 RR32_06720 RR32_06725 PF13450 NAD(P)-binding Rossmann-like domain RR32_06730 PF07103 RR32_06730 RR32_06735 PF02353 Mycolic acid cyclopropane synthetase RR32_06740 PF06966 RR32_06740 RR32_06745 PF02353 Mycolic acid cyclopropane synthetase RR32_06750 PF00512 His Kinase A (phospho-acceptor) domain RR32_06750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_06755 PF00072 Response regulator receiver domain RR32_06755 PF00486 Transcriptional regulatory protein, C terminal RR32_06760 PF16036 RR32_06760 RR32_06770 PF13302 Acetyltransferase (GNAT) domain RR32_06775 PF01177 Asp/Glu/Hydantoin racemase RR32_06780 PF00892 EamA-like transporter family RR32_06785 PF00107 Zinc-binding dehydrogenase RR32_06785 PF08240 Alcohol dehydrogenase GroES-like domain RR32_06790 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RR32_06795 PF05853 Prokaryotic protein of unknown function (DUF849) RR32_06800 PF07690 Major Facilitator Superfamily RR32_06805 PF01323 DSBA-like thioredoxin domain RR32_06810 PF00355 Rieske [2Fe-2S] domain RR32_06815 PF03601 RR32_06815 RR32_06820 PF12625 RR32_06820 RR32_06820 PF12833 Helix-turn-helix domain RR32_06825 PF06821 Serine hydrolase RR32_06830 PF06980 RR32_06830 RR32_06835 PF06713 RR32_06835 RR32_06840 PF07995 Glucose / Sorbosone dehydrogenase RR32_06845 PF04116 RR32_06845 RR32_06850 PF07690 Major Facilitator Superfamily RR32_06855 PF00440 Bacterial regulatory proteins, tetR family RR32_06855 PF16859 RR32_06855 RR32_06860 PF00375 Sodium:dicarboxylate symporter family RR32_06870 PF00753 Metallo-beta-lactamase superfamily RR32_06870 PF16123 RR32_06870 RR32_06875 PF00528 Binding-protein-dependent transport system inner membrane component RR32_06880 PF00005 ABC transporter RR32_06880 PF09383 NIL domain RR32_06885 PF03180 NLPA lipoprotein RR32_06895 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RR32_06895 PF02843 Phosphoribosylglycinamide synthetase, C domain RR32_06895 PF02844 Phosphoribosylglycinamide synthetase, N domain RR32_06900 PF01808 AICARFT/IMPCHase bienzyme RR32_06900 PF02142 MGS-like domain RR32_06905 PF02954 Bacterial regulatory protein, Fis family RR32_06910 PF11906 RR32_06910 RR32_06915 PF06325 Ribosomal protein L11 methyltransferase (PrmA) RR32_06925 PF01134 Glucose inhibited division protein A RR32_06925 PF13932 GidA associated domain 3 RR32_06930 PF13280 RR32_06930 RR32_06935 PF14403 RR32_06935 RR32_06940 PF04168 RR32_06940 RR32_06945 PF01841 Transglutaminase-like superfamily RR32_06945 PF08379 RR32_06945 RR32_06950 PF00227 Proteasome subunit RR32_06955 PF00842 Alanine racemase, C-terminal domain RR32_06955 PF01168 Alanine racemase, N-terminal domain RR32_06960 PF00772 DnaB-like helicase N terminal domain RR32_06960 PF03796 DnaB-like helicase C terminal domain RR32_06965 PF01281 Ribosomal protein L9, N-terminal domain RR32_06965 PF03948 Ribosomal protein L9, C-terminal domain RR32_06970 PF01084 Ribosomal protein S18 RR32_06975 PF01250 Ribosomal protein S6 RR32_06980 PF01040 UbiA prenyltransferase family RR32_06985 PF03626 RR32_06985 RR32_06990 PF00510 Cytochrome c oxidase subunit III RR32_06995 PF00115 Cytochrome C and Quinol oxidase polypeptide I RR32_07000 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RR32_07000 PF06481 COX Aromatic Rich Motif RR32_07005 PF06271 RR32_07005 RR32_07005 PF14237 RR32_07005 RR32_07010 PF00391 PEP-utilising enzyme, mobile domain RR32_07010 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RR32_07010 PF02896 PEP-utilising enzyme, TIM barrel domain RR32_07015 PF03618 RR32_07015 RR32_07025 PF01522 Polysaccharide deacetylase RR32_07025 PF14883 Hypothetical glycosyl hydrolase family 13 RR32_07030 PF13641 Glycosyltransferase like family 2 RR32_07035 PF13994 RR32_07035 RR32_07045 PF00296 Luciferase-like monooxygenase RR32_07060 PF00872 RR32_07060 RR32_07065 PF00472 RF-1 domain RR32_07065 PF03462 PCRF domain RR32_07070 PF05175 Methyltransferase small domain RR32_07075 PF00528 Binding-protein-dependent transport system inner membrane component RR32_07080 PF09084 NMT1/THI5 like RR32_07090 PF00665 Integrase core domain RR32_07095 PF12625 RR32_07095 RR32_07095 PF12833 Helix-turn-helix domain RR32_07100 PF00106 short chain dehydrogenase RR32_07105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_07105 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_07105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_07110 PF00501 AMP-binding enzyme RR32_07110 PF13193 AMP-binding enzyme C-terminal domain RR32_07115 PF01613 Flavin reductase like domain RR32_07120 PF00899 ThiF family RR32_07125 PF03109 RR32_07125 RR32_07130 PF02152 Dihydroneopterin aldolase RR32_07135 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RR32_07140 PF03814 RR32_07140 RR32_07145 PF00122 E1-E2 ATPase RR32_07145 PF00702 haloacid dehalogenase-like hydrolase RR32_07150 PF02669 RR32_07150 RR32_07155 PF00512 His Kinase A (phospho-acceptor) domain RR32_07155 PF00582 Universal stress protein family RR32_07155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_07155 PF02702 Osmosensitive K+ channel His kinase sensor domain RR32_07155 PF13493 Domain of unknown function (DUF4118) RR32_07160 PF00072 Response regulator receiver domain RR32_07160 PF00486 Transcriptional regulatory protein, C terminal RR32_07165 PF00120 Glutamine synthetase, catalytic domain RR32_07170 PF10973 RR32_07170 RR32_07175 PF03232 RR32_07175 RR32_07180 PF07690 Major Facilitator Superfamily RR32_07185 PF01103 Surface antigen RR32_07185 PF07244 Surface antigen variable number repeat RR32_07185 PF17243 RR32_07185 RR32_07190 PF04357 RR32_07190 RR32_07195 PF10282 Lactonase, 7-bladed beta-propeller RR32_07205 PF00330 Aconitase family (aconitate hydratase) RR32_07205 PF06434 Aconitate hydratase 2 N-terminus RR32_07205 PF11791 Aconitate B N-terminal domain RR32_07215 PF00520 Ion transport protein RR32_07220 PF07690 Major Facilitator Superfamily RR32_07230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_07230 PF03466 LysR substrate binding domain RR32_07235 PF04284 RR32_07235 RR32_07245 PF00849 RNA pseudouridylate synthase RR32_07245 PF01479 S4 domain RR32_07250 PF00583 Acetyltransferase (GNAT) family RR32_07255 PF04221 RelB antitoxin RR32_07260 PF00849 RNA pseudouridylate synthase RR32_07265 PF02367 Uncharacterised P-loop hydrolase UPF0079 RR32_07270 PF01119 DNA mismatch repair protein, C-terminal domain RR32_07270 PF08676 MutL C terminal dimerisation domain RR32_07270 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_07275 PF01715 IPP transferase RR32_07280 PF17209 RR32_07280 RR32_07285 PF00892 EamA-like transporter family RR32_07290 PF00881 Nitroreductase family RR32_07300 PF00149 Calcineurin-like phosphoesterase RR32_07305 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RR32_07310 PF00749 tRNA synthetases class I (E and Q), catalytic domain RR32_07310 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RR32_07315 PF00117 Glutamine amidotransferase class-I RR32_07320 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RR32_07325 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RR32_07330 PF13520 Amino acid permease RR32_07335 PF00171 Aldehyde dehydrogenase family RR32_07345 PF12146 Putative lysophospholipase RR32_07350 PF00465 Iron-containing alcohol dehydrogenase RR32_07355 PF05970 RR32_07355 RR32_07355 PF14493 RR32_07355 RR32_07360 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase RR32_07365 PF06445 GyrI-like small molecule binding domain RR32_07365 PF12833 Helix-turn-helix domain RR32_07370 PF02110 Hydroxyethylthiazole kinase family RR32_07385 PF01433 Peptidase family M1 RR32_07385 PF11940 Domain of unknown function (DUF3458) RR32_07385 PF17432 RR32_07385 RR32_07390 PF05229 RR32_07390 RR32_07395 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RR32_07400 PF00577 Outer membrane usher protein RR32_07405 PF05229 RR32_07405 RR32_07410 PF13417 Glutathione S-transferase, N-terminal domain RR32_07410 PF14497 Glutathione S-transferase, C-terminal domain RR32_07415 PF00106 short chain dehydrogenase RR32_07420 PF00106 short chain dehydrogenase RR32_07425 PF01817 Chorismate mutase type II RR32_07430 PF01037 AsnC family RR32_07430 PF13412 Winged helix-turn-helix DNA-binding RR32_07450 PF00440 Bacterial regulatory proteins, tetR family RR32_07455 PF00593 TonB dependent receptor RR32_07455 PF07715 TonB-dependent Receptor Plug Domain RR32_07460 PF03328 HpcH/HpaI aldolase/citrate lyase family RR32_07465 PF04183 IucA / IucC family RR32_07465 PF06276 Ferric iron reductase FhuF-like transporter RR32_07470 PF07690 Major Facilitator Superfamily RR32_07475 PF04183 IucA / IucC family RR32_07475 PF06276 Ferric iron reductase FhuF-like transporter RR32_07480 PF02423 Ornithine cyclodeaminase/mu-crystallin family RR32_07485 PF00291 Pyridoxal-phosphate dependent enzyme RR32_07490 PF00924 Mechanosensitive ion channel RR32_07535 PF00005 ABC transporter RR32_07540 PF00582 Universal stress protein family RR32_07555 PF06271 RR32_07555 RR32_07560 PF00122 E1-E2 ATPase RR32_07560 PF00690 Cation transporter/ATPase, N-terminus RR32_07560 PF00702 haloacid dehalogenase-like hydrolase RR32_07565 PF02308 RR32_07565 RR32_07570 PF03594 RR32_07570 RR32_07575 PF01037 AsnC family RR32_07575 PF13412 Winged helix-turn-helix DNA-binding RR32_07580 PF01810 RR32_07580 RR32_07585 PF00923 Transaldolase RR32_07590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_07590 PF03466 LysR substrate binding domain RR32_07595 PF05232 RR32_07595 RR32_07600 PF00108 Thiolase, N-terminal domain RR32_07600 PF02803 Thiolase, C-terminal domain RR32_07605 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_07610 PF01575 MaoC like domain RR32_07615 PF00144 Beta-lactamase RR32_07620 PF00440 Bacterial regulatory proteins, tetR family RR32_07625 PF07690 Major Facilitator Superfamily RR32_07630 PF13582 Metallo-peptidase family M12B Reprolysin-like RR32_07640 PF12169 DNA polymerase III subunits gamma and tau domain III RR32_07640 PF13177 DNA polymerase III, delta subunit RR32_07645 PF04185 Phosphoesterase family RR32_07645 PF05506 RR32_07645 RR32_07650 PF13279 Thioesterase-like superfamily RR32_07655 PF00465 Iron-containing alcohol dehydrogenase RR32_07660 PF05666 RR32_07660 RR32_07665 PF00857 Isochorismatase family RR32_07670 PF01638 HxlR-like helix-turn-helix RR32_07675 PF01361 Tautomerase enzyme RR32_07680 PF01451 Low molecular weight phosphotyrosine protein phosphatase RR32_07685 PF01565 FAD binding domain RR32_07685 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RR32_07690 PF02698 DUF218 domain RR32_07695 PF12146 Putative lysophospholipase RR32_07705 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family RR32_07710 PF01645 Conserved region in glutamate synthase RR32_07720 PF05229 RR32_07720 RR32_07725 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RR32_07730 PF00665 Integrase core domain RR32_07740 PF12832 MFS_1 like family RR32_07750 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RR32_07750 PF02785 Biotin carboxylase C-terminal domain RR32_07750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RR32_07755 PF00364 Biotin-requiring enzyme RR32_07760 PF01220 Dehydroquinase class II RR32_07765 PF00817 impB/mucB/samB family RR32_07765 PF11799 impB/mucB/samB family C-terminal domain RR32_07765 PF13438 RR32_07765 RR32_07770 PF13379 NMT1-like family RR32_07775 PF00072 Response regulator receiver domain RR32_07775 PF03861 ANTAR domain RR32_07785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RR32_07785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RR32_07785 PF04324 BFD-like [2Fe-2S] binding domain RR32_07785 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_07790 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_07790 PF13806 Rieske-like [2Fe-2S] domain RR32_07795 PF00384 Molybdopterin oxidoreductase RR32_07795 PF01568 Molydopterin dinucleotide binding domain RR32_07795 PF04324 BFD-like [2Fe-2S] binding domain RR32_07795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RR32_07800 PF12804 MobA-like NTP transferase domain RR32_07805 PF00384 Molybdopterin oxidoreductase RR32_07805 PF01568 Molydopterin dinucleotide binding domain RR32_07805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RR32_07810 PF04055 Radical SAM superfamily RR32_07810 PF06463 Molybdenum Cofactor Synthesis C RR32_07810 PF13353 4Fe-4S single cluster domain RR32_07815 PF02597 ThiS family RR32_07820 PF02391 MoaE protein RR32_07825 PF00994 Probable molybdopterin binding domain RR32_07825 PF01967 MoaC family RR32_07830 PF00994 Probable molybdopterin binding domain RR32_07830 PF03453 MoeA N-terminal region (domain I and II) RR32_07830 PF03454 MoeA C-terminal region (domain IV) RR32_07835 PF01638 HxlR-like helix-turn-helix RR32_07840 PF00155 Aminotransferase class I and II RR32_07840 PF00392 Bacterial regulatory proteins, gntR family RR32_07845 PF00892 EamA-like transporter family RR32_07850 PF04358 DsrC like protein RR32_07865 PF02635 DsrE/DsrF-like family RR32_07870 PF01370 NAD dependent epimerase/dehydratase family RR32_07875 PF00206 Lyase RR32_07875 PF10415 Fumarase C C-terminus RR32_07895 PF01266 FAD dependent oxidoreductase RR32_07905 PF02542 YgbB family RR32_07915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RR32_07915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RR32_07920 PF00440 Bacterial regulatory proteins, tetR family RR32_07925 PF00072 Response regulator receiver domain RR32_07925 PF00158 Sigma-54 interaction domain RR32_07925 PF02954 Bacterial regulatory protein, Fis family RR32_07930 PF00512 His Kinase A (phospho-acceptor) domain RR32_07930 PF00989 PAS fold RR32_07930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_07935 PF00919 Uncharacterized protein family UPF0004 RR32_07935 PF04055 Radical SAM superfamily RR32_07940 PF00696 Amino acid kinase family RR32_07945 PF01765 Ribosome recycling factor RR32_07950 PF01255 Putative undecaprenyl diphosphate synthase RR32_07955 PF01148 Cytidylyltransferase family RR32_07960 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RR32_07960 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal RR32_07960 PF13288 DXP reductoisomerase C-terminal domain RR32_07965 PF02163 Peptidase family M50 RR32_07965 PF13180 PDZ domain RR32_07970 PF01103 Surface antigen RR32_07970 PF07244 Surface antigen variable number repeat RR32_07975 PF03938 Outer membrane protein (OmpH-like) RR32_07980 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_07980 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RR32_07980 PF14602 Hexapeptide repeat of succinyl-transferase RR32_07985 PF07977 FabA-like domain RR32_07990 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_07990 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RR32_07995 PF13174 Tetratricopeptide repeat RR32_07995 PF16331 RR32_07995 RR32_08000 PF02631 RecX family RR32_08005 PF00154 recA bacterial DNA recombination protein RR32_08010 PF01479 S4 domain RR32_08015 PF13419 Haloacid dehalogenase-like hydrolase RR32_08030 PF13302 Acetyltransferase (GNAT) domain RR32_08035 PF01037 AsnC family RR32_08035 PF13412 Winged helix-turn-helix DNA-binding RR32_08040 PF00266 Aminotransferase class-V RR32_08045 PF00324 Amino acid permease RR32_08050 PF07859 alpha/beta hydrolase fold RR32_08055 PF00082 Subtilase family RR32_08055 PF05922 Peptidase inhibitor I9 RR32_08060 PF00916 RR32_08060 RR32_08060 PF01740 STAS domain RR32_08065 PF00872 RR32_08065 RR32_08075 PF07995 Glucose / Sorbosone dehydrogenase RR32_08080 PF00582 Universal stress protein family RR32_08085 PF00563 EAL domain RR32_08085 PF00990 GGDEF domain RR32_08085 PF08447 PAS fold RR32_08085 PF08448 PAS fold RR32_08095 PF12802 MarR family RR32_08100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RR32_08100 PF02378 Phosphotransferase system, EIIC RR32_08105 PF00294 pfkB family carbohydrate kinase RR32_08110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RR32_08110 PF00381 PTS HPr component phosphorylation site RR32_08110 PF00391 PEP-utilising enzyme, mobile domain RR32_08110 PF02896 PEP-utilising enzyme, TIM barrel domain RR32_08110 PF05524 PEP-utilising enzyme, N-terminal RR32_08115 PF00561 alpha/beta hydrolase fold RR32_08130 PF03928 Domain of unknown function (DUF336) RR32_08135 PF05525 RR32_08135 RR32_08140 PF00557 Metallopeptidase family M24 RR32_08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_08145 PF03466 LysR substrate binding domain RR32_08155 PF00462 Glutaredoxin RR32_08160 PF00202 Aminotransferase class-III RR32_08165 PF00571 CBS domain RR32_08170 PF11042 RR32_08170 RR32_08190 PF00448 SRP54-type protein, GTPase domain RR32_08190 PF02881 SRP54-type protein, helical bundle domain RR32_08195 PF00881 Nitroreductase family RR32_08200 PF09829 RR32_08200 RR32_08205 PF00583 Acetyltransferase (GNAT) family RR32_08210 PF09600 RR32_08210 RR32_08215 PF08173 RR32_08215 RR32_08220 PF02322 RR32_08220 RR32_08225 PF01654 RR32_08225 RR32_08235 PF07290 RR32_08235 RR32_08240 PF00355 Rieske [2Fe-2S] domain RR32_08245 PF00294 pfkB family carbohydrate kinase RR32_08250 PF00593 TonB dependent receptor RR32_08250 PF07715 TonB-dependent Receptor Plug Domain RR32_08255 PF00675 Insulinase (Peptidase family M16) RR32_08255 PF05193 Peptidase M16 inactive domain RR32_08255 PF08367 Peptidase M16C associated RR32_08260 PF02253 Phospholipase A1 RR32_08265 PF02386 Cation transport protein RR32_08270 PF02254 TrkA-N domain RR32_08275 PF00291 Pyridoxal-phosphate dependent enzyme RR32_08275 PF00585 C-terminal regulatory domain of Threonine dehydratase RR32_08280 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RR32_08285 PF01863 Protein of unknown function DUF45 RR32_08295 PF01118 Semialdehyde dehydrogenase, NAD binding domain RR32_08295 PF02774 Semialdehyde dehydrogenase, dimerisation domain RR32_08305 PF02617 ATP-dependent Clp protease adaptor protein ClpS RR32_08310 PF00004 ATPase family associated with various cellular activities (AAA) RR32_08310 PF02861 Clp amino terminal domain RR32_08310 PF07724 AAA domain (Cdc48 subfamily) RR32_08310 PF10431 C-terminal, D2-small domain, of ClpB protein RR32_08315 PF02694 RR32_08315 RR32_08320 PF00793 DAHP synthetase I family RR32_08325 PF12697 Alpha/beta hydrolase family RR32_08330 PF03551 Transcriptional regulator PadR-like family RR32_08330 PF10400 Virulence activator alpha C-term RR32_08335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RR32_08335 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_08340 PF12680 SnoaL-like domain RR32_08345 PF13472 GDSL-like Lipase/Acylhydrolase family RR32_08350 PF12146 Putative lysophospholipase RR32_08360 PF00117 Glutamine amidotransferase class-I RR32_08360 PF06418 CTP synthase N-terminus RR32_08365 PF00793 DAHP synthetase I family RR32_08370 PF00113 Enolase, C-terminal TIM barrel domain RR32_08370 PF03952 Enolase, N-terminal domain RR32_08375 PF04239 Protein of unknown function (DUF421) RR32_08380 PF01925 RR32_08380 RR32_08385 PF04977 Septum formation initiator RR32_08390 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RR32_08395 PF01144 Coenzyme A transferase RR32_08400 PF01144 Coenzyme A transferase RR32_08405 PF00108 Thiolase, N-terminal domain RR32_08405 PF02803 Thiolase, C-terminal domain RR32_08410 PF00206 Lyase RR32_08410 PF10397 Adenylosuccinate lyase C-terminus RR32_08415 PF00561 alpha/beta hydrolase fold RR32_08420 PF07690 Major Facilitator Superfamily RR32_08425 PF02627 Carboxymuconolactone decarboxylase family RR32_08430 PF00775 Dioxygenase RR32_08430 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal RR32_08435 PF00775 Dioxygenase RR32_08440 PF01487 Type I 3-dehydroquinase RR32_08445 PF13229 Right handed beta helix region RR32_08450 PF04966 Carbohydrate-selective porin, OprB family RR32_08455 PF01011 PQQ enzyme repeat RR32_08465 PF04143 RR32_08465 RR32_08470 PF04143 RR32_08470 RR32_08475 PF00753 Metallo-beta-lactamase superfamily RR32_08480 PF01614 Bacterial transcriptional regulator RR32_08480 PF09339 IclR helix-turn-helix domain RR32_08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_08485 PF03466 LysR substrate binding domain RR32_08490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_08490 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_08490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_08495 PF01636 Phosphotransferase enzyme family RR32_08500 PF00300 Histidine phosphatase superfamily (branch 1) RR32_08505 PF00106 short chain dehydrogenase RR32_08510 PF03573 outer membrane porin, OprD family RR32_08515 PF07690 Major Facilitator Superfamily RR32_08520 PF01047 MarR family RR32_08525 PF01425 Amidase RR32_08530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_08530 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RR32_08540 PF13577 SnoaL-like domain RR32_08545 PF00355 Rieske [2Fe-2S] domain RR32_08545 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RR32_08550 PF00866 Ring hydroxylating beta subunit RR32_08555 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_08560 PF00111 2Fe-2S iron-sulfur cluster binding domain RR32_08560 PF00175 Oxidoreductase NAD-binding domain RR32_08560 PF00970 Oxidoreductase FAD-binding domain RR32_08565 PF01613 Flavin reductase like domain RR32_08570 PF12833 Helix-turn-helix domain RR32_08570 PF14525 RR32_08570 RR32_08580 PF00872 RR32_08580 RR32_08595 PF00171 Aldehyde dehydrogenase family RR32_08600 PF00561 alpha/beta hydrolase fold RR32_08605 PF00108 Thiolase, N-terminal domain RR32_08605 PF02803 Thiolase, C-terminal domain RR32_08610 PF01144 Coenzyme A transferase RR32_08615 PF01144 Coenzyme A transferase RR32_08620 PF00775 Dioxygenase RR32_08620 PF04444 Catechol dioxygenase N terminus RR32_08625 PF02426 Muconolactone delta-isomerase RR32_08630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RR32_08630 PF13378 Enolase C-terminal domain-like RR32_08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_08635 PF03466 LysR substrate binding domain RR32_08640 PF09694 RR32_08640 RR32_08645 PF00392 Bacterial regulatory proteins, gntR family RR32_08645 PF07729 FCD domain RR32_08650 PF00920 Dehydratase family RR32_08655 PF07690 Major Facilitator Superfamily RR32_08665 PF00171 Aldehyde dehydrogenase family RR32_08675 PF00561 alpha/beta hydrolase fold RR32_08680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RR32_08685 PF03435 Saccharopine dehydrogenase RR32_08690 PF01872 RibD C-terminal domain RR32_08695 PF01965 DJ-1/PfpI family RR32_08700 PF13411 MerR HTH family regulatory protein RR32_08705 PF01965 DJ-1/PfpI family RR32_08710 PF12706 Beta-lactamase superfamily domain RR32_08715 PF00440 Bacterial regulatory proteins, tetR family RR32_08720 PF01638 HxlR-like helix-turn-helix RR32_08725 PF13460 NADH(P)-binding RR32_08735 PF00440 Bacterial regulatory proteins, tetR family RR32_08760 PF03922 OmpW family RR32_08765 PF07690 Major Facilitator Superfamily RR32_08770 PF04909 Amidohydrolase RR32_08775 PF07158 RR32_08775 RR32_08780 PF00392 Bacterial regulatory proteins, gntR family RR32_08780 PF07702 UTRA domain RR32_08785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_08785 PF03466 LysR substrate binding domain RR32_08790 PF04657 RR32_08790 RR32_08795 PF04657 RR32_08795 RR32_08800 PF16576 RR32_08800 RR32_08805 PF07690 Major Facilitator Superfamily RR32_08810 PF00440 Bacterial regulatory proteins, tetR family RR32_08810 PF14246 AefR-like transcriptional repressor, C-terminal region RR32_08815 PF00171 Aldehyde dehydrogenase family RR32_08820 PF00920 Dehydratase family RR32_08825 PF01557 Fumarylacetoacetate (FAA) hydrolase family RR32_08830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_08830 PF03466 LysR substrate binding domain RR32_08835 PF01370 NAD dependent epimerase/dehydratase family RR32_08840 PF07690 Major Facilitator Superfamily RR32_08845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RR32_08845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RR32_08850 PF01497 Periplasmic binding protein RR32_08855 PF01032 FecCD transport family RR32_08860 PF00005 ABC transporter RR32_08865 PF00583 Acetyltransferase (GNAT) family RR32_08870 PF12833 Helix-turn-helix domain RR32_08875 PF01925 RR32_08875 RR32_08880 PF00156 Phosphoribosyl transferase domain RR32_08885 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RR32_08890 PF00293 NUDIX domain RR32_08895 PF02219 Methylenetetrahydrofolate reductase RR32_08895 PF12225 RR32_08895 RR32_08915 PF01425 Amidase RR32_08920 PF13437 HlyD family secretion protein RR32_08920 PF13533 Biotin-lipoyl like RR32_08925 PF07690 Major Facilitator Superfamily RR32_08935 PF03321 GH3 auxin-responsive promoter RR32_08940 PF02321 Outer membrane efflux protein RR32_08950 PF01975 Survival protein SurE RR32_08960 PF13328 HD domain RR32_08965 PF07804 HipA-like C-terminal domain RR32_08970 PF01381 Helix-turn-helix RR32_08975 PF00440 Bacterial regulatory proteins, tetR family RR32_08990 PF00528 Binding-protein-dependent transport system inner membrane component RR32_08995 PF00528 Binding-protein-dependent transport system inner membrane component RR32_09000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RR32_09005 PF00296 Luciferase-like monooxygenase RR32_09010 PF00596 Class II Aldolase and Adducin N-terminal domain RR32_09025 PF16970 RR32_09025 RR32_09030 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RR32_09030 PF02753 Pili assembly chaperone PapD, C-terminal domain RR32_09035 PF00577 Outer membrane usher protein RR32_09035 PF13953 PapC C-terminal domain RR32_09035 PF13954 PapC N-terminal domain RR32_09040 PF00419 Fimbrial protein RR32_09045 PF16223 RR32_09045 RR32_09050 PF00107 Zinc-binding dehydrogenase RR32_09050 PF08240 Alcohol dehydrogenase GroES-like domain RR32_09075 PF13091 PLD-like domain RR32_09095 PF01244 Membrane dipeptidase (Peptidase family M19) RR32_09100 PF04055 Radical SAM superfamily RR32_09100 PF13186 Iron-sulfur cluster-binding domain RR32_09100 PF13353 4Fe-4S single cluster domain RR32_09105 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RR32_09110 PF03070 TENA/THI-4/PQQC family RR32_09115 PF12706 Beta-lactamase superfamily domain RR32_09120 PF08042 RR32_09120 RR32_09125 PF02503 Polyphosphate kinase middle domain RR32_09125 PF13089 Polyphosphate kinase N-terminal domain RR32_09125 PF13090 Polyphosphate kinase C-terminal domain RR32_09130 PF00149 Calcineurin-like phosphoesterase RR32_09130 PF02872 5'-nucleotidase, C-terminal domain RR32_09135 PF01475 Ferric uptake regulator family RR32_09140 PF00593 TonB dependent receptor RR32_09140 PF07715 TonB-dependent Receptor Plug Domain RR32_09145 PF00873 AcrB/AcrD/AcrF family RR32_09150 PF00550 Phosphopantetheine attachment site RR32_09150 PF00857 Isochorismatase family RR32_09155 PF00501 AMP-binding enzyme RR32_09155 PF13193 AMP-binding enzyme C-terminal domain RR32_09160 PF00425 chorismate binding enzyme RR32_09165 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_09170 PF00756 Putative esterase RR32_09170 PF11806 Domain of unknown function (DUF3327) RR32_09175 PF03621 MbtH-like protein RR32_09180 PF00501 AMP-binding enzyme RR32_09180 PF00550 Phosphopantetheine attachment site RR32_09180 PF00668 Condensation domain RR32_09180 PF00975 Thioesterase domain RR32_09180 PF13193 AMP-binding enzyme C-terminal domain RR32_09185 PF05977 Transmembrane secretion effector RR32_09190 PF01648 4'-phosphopantetheinyl transferase superfamily RR32_09205 PF03929 RR32_09205 RR32_09210 PF00005 ABC transporter RR32_09215 PF00528 Binding-protein-dependent transport system inner membrane component RR32_09220 PF13531 Bacterial extracellular solute-binding protein RR32_09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_09230 PF00355 Rieske [2Fe-2S] domain RR32_09230 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RR32_09235 PF00866 Ring hydroxylating beta subunit RR32_09240 PF00111 2Fe-2S iron-sulfur cluster binding domain RR32_09240 PF00175 Oxidoreductase NAD-binding domain RR32_09240 PF00970 Oxidoreductase FAD-binding domain RR32_09245 PF12833 Helix-turn-helix domain RR32_09245 PF14525 RR32_09245 RR32_09250 PF13557 RR32_09250 RR32_09255 PF01613 Flavin reductase like domain RR32_09265 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_09270 PF01738 Dienelactone hydrolase family RR32_09275 PF07690 Major Facilitator Superfamily RR32_09280 PF12833 Helix-turn-helix domain RR32_09280 PF14525 RR32_09280 RR32_09285 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_09290 PF02447 RR32_09290 RR32_09295 PF00753 Metallo-beta-lactamase superfamily RR32_09300 PF04940 Sensors of blue-light using FAD RR32_09315 PF00665 Integrase core domain RR32_09325 PF11738 Protein of unknown function (DUF3298) RR32_09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_09335 PF03466 LysR substrate binding domain RR32_09340 PF01144 Coenzyme A transferase RR32_09345 PF01144 Coenzyme A transferase RR32_09350 PF02667 RR32_09350 RR32_09355 PF00108 Thiolase, N-terminal domain RR32_09355 PF02803 Thiolase, C-terminal domain RR32_09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_09360 PF03466 LysR substrate binding domain RR32_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_09365 PF03466 LysR substrate binding domain RR32_09380 PF00206 Lyase RR32_09380 PF10415 Fumarase C C-terminus RR32_09385 PF00593 TonB dependent receptor RR32_09385 PF07715 TonB-dependent Receptor Plug Domain RR32_09390 PF00083 Sugar (and other) transporter RR32_09390 PF07690 Major Facilitator Superfamily RR32_09395 PF06155 Protein of unknown function (DUF971) RR32_09400 PF13646 HEAT repeats RR32_09405 PF00005 ABC transporter RR32_09410 PF00528 Binding-protein-dependent transport system inner membrane component RR32_09415 PF13379 NMT1-like family RR32_09420 PF13187 4Fe-4S dicluster domain RR32_09425 PF00890 FAD binding domain RR32_09425 PF02910 Fumarate reductase flavoprotein C-term RR32_09430 PF00392 Bacterial regulatory proteins, gntR family RR32_09430 PF07702 UTRA domain RR32_09435 PF02417 RR32_09435 RR32_09440 PF12833 Helix-turn-helix domain RR32_09445 PF00892 EamA-like transporter family RR32_09450 PF00742 Homoserine dehydrogenase RR32_09450 PF03447 Homoserine dehydrogenase, NAD binding domain RR32_09455 PF01925 RR32_09455 RR32_09460 PF04273 Putative phosphatase (DUF442) RR32_09460 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_09465 PF00753 Metallo-beta-lactamase superfamily RR32_09470 PF00158 Sigma-54 interaction domain RR32_09470 PF02954 Bacterial regulatory protein, Fis family RR32_09475 PF01062 RR32_09475 RR32_09480 PF00107 Zinc-binding dehydrogenase RR32_09480 PF08240 Alcohol dehydrogenase GroES-like domain RR32_09485 PF00106 short chain dehydrogenase RR32_09490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RR32_09490 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_09495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RR32_09495 PF00364 Biotin-requiring enzyme RR32_09495 PF02817 e3 binding domain RR32_09500 PF02779 Transketolase, pyrimidine binding domain RR32_09500 PF02780 Transketolase, C-terminal domain RR32_09505 PF00676 Dehydrogenase E1 component RR32_09520 PF14518 Iron-containing redox enzyme RR32_09525 PF00990 GGDEF domain RR32_09530 PF01264 Chorismate synthase RR32_09535 PF05175 Methyltransferase small domain RR32_09540 PF00291 Pyridoxal-phosphate dependent enzyme RR32_09545 PF05762 VWA domain containing CoxE-like protein RR32_09550 PF00004 ATPase family associated with various cellular activities (AAA) RR32_09560 PF05166 YcgL domain RR32_09580 PF00570 HRDC domain RR32_09580 PF01612 3'-5' exonuclease RR32_09585 PF02132 RecR protein RR32_09585 PF13662 Toprim domain RR32_09590 PF02575 YbaB/EbfC DNA-binding family RR32_09600 PF01053 Cys/Met metabolism PLP-dependent enzyme RR32_09605 PF00561 alpha/beta hydrolase fold RR32_09610 PF08241 Methyltransferase domain RR32_09615 PF13103 TonB C terminal RR32_09630 PF04828 Glutathione-dependent formaldehyde-activating enzyme RR32_09635 PF13308 YARHG domain RR32_09640 PF01230 HIT domain RR32_09645 PF13609 Gram-negative porin RR32_09650 PF06078 Bacterial protein of unknown function (DUF937) RR32_09660 PF10977 RR32_09660 RR32_09665 PF12698 ABC-2 family transporter protein RR32_09670 PF12698 ABC-2 family transporter protein RR32_09675 PF00005 ABC transporter RR32_09680 PF13437 HlyD family secretion protein RR32_09680 PF13533 Biotin-lipoyl like RR32_09685 PF00440 Bacterial regulatory proteins, tetR family RR32_09685 PF09209 Domain of unknown function (DUF1956) RR32_09690 PF02684 RR32_09690 RR32_09695 PF00593 TonB dependent receptor RR32_09695 PF07715 TonB-dependent Receptor Plug Domain RR32_09705 PF03929 RR32_09705 RR32_09715 PF01925 RR32_09715 RR32_09720 PF00793 DAHP synthetase I family RR32_09730 PF00593 TonB dependent receptor RR32_09730 PF07715 TonB-dependent Receptor Plug Domain RR32_09735 PF02654 RR32_09735 RR32_09740 PF00328 Histidine phosphatase superfamily (branch 2) RR32_09745 PF00300 Histidine phosphatase superfamily (branch 1) RR32_09750 PF02277 Phosphoribosyltransferase RR32_09755 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RR32_09760 PF13563 2'-5' RNA ligase superfamily RR32_09765 PF08125 Mannitol dehydrogenase C-terminal domain RR32_09765 PF13419 Haloacid dehalogenase-like hydrolase RR32_09770 PF04073 Aminoacyl-tRNA editing domain RR32_09780 PF03109 RR32_09780 RR32_09785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_09785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_09790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_09790 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_09795 PF00487 RR32_09795 RR32_09800 PF12833 Helix-turn-helix domain RR32_09800 PF12852 Cupin RR32_09805 PF13616 PPIC-type PPIASE domain RR32_09805 PF13624 SurA N-terminal domain RR32_09810 PF00216 Bacterial DNA-binding protein RR32_09815 PF05597 RR32_09815 RR32_09825 PF02082 Transcriptional regulator RR32_09830 PF00266 Aminotransferase class-V RR32_09835 PF01592 NifU-like N terminal domain RR32_09840 PF01521 Iron-sulphur cluster biosynthesis RR32_09845 PF00226 DnaJ domain RR32_09845 PF07743 HSCB C-terminal oligomerisation domain RR32_09850 PF00012 Hsp70 protein RR32_09855 PF00111 2Fe-2S iron-sulfur cluster binding domain RR32_09860 PF00211 Adenylate and Guanylate cyclase catalytic domain RR32_09865 PF01230 HIT domain RR32_09870 PF00270 DEAD/DEAH box helicase RR32_09870 PF00271 Helicase conserved C-terminal domain RR32_09870 PF02559 CarD-like/TRCF domain RR32_09870 PF03461 TRCF domain RR32_09880 PF04261 Dyp-type peroxidase family RR32_09885 PF13417 Glutathione S-transferase, N-terminal domain RR32_09890 PF03737 Demethylmenaquinone methyltransferase RR32_09895 PF01118 Semialdehyde dehydrogenase, NAD binding domain RR32_09900 PF01649 Ribosomal protein S20 RR32_09905 PF00300 Histidine phosphatase superfamily (branch 1) RR32_09910 PF00459 Inositol monophosphatase family RR32_09920 PF02586 Uncharacterised ACR, COG2135 RR32_09925 PF00005 ABC transporter RR32_09925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RR32_09930 PF00528 Binding-protein-dependent transport system inner membrane component RR32_09930 PF12911 RR32_09930 RR32_09935 PF00528 Binding-protein-dependent transport system inner membrane component RR32_09940 PF01432 Peptidase family M3 RR32_09945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RR32_09950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RR32_09955 PF00593 TonB dependent receptor RR32_09955 PF07715 TonB-dependent Receptor Plug Domain RR32_09960 PF03544 Gram-negative bacterial TonB protein C-terminal RR32_09965 PF01618 RR32_09965 RR32_09970 PF02472 Biopolymer transport protein ExbD/TolR RR32_09975 PF02472 Biopolymer transport protein ExbD/TolR RR32_09980 PF00583 Acetyltransferase (GNAT) family RR32_09985 PF01274 Malate synthase RR32_09990 PF03969 AFG1-like ATPase RR32_09995 PF12625 RR32_09995 RR32_09995 PF12833 Helix-turn-helix domain RR32_10000 PF00743 Flavin-binding monooxygenase-like RR32_10005 PF03956 RR32_10005 RR32_10010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RR32_10015 PF06305 RR32_10015 RR32_10020 PF00216 Bacterial DNA-binding protein RR32_10025 PF00575 S1 RNA binding domain RR32_10030 PF02224 Cytidylate kinase RR32_10035 PF10604 Polyketide cyclase / dehydrase and lipid transport RR32_10040 PF14437 RR32_10040 RR32_10045 PF16113 RR32_10045 RR32_10050 PF03167 Uracil DNA glycosylase superfamily RR32_10055 PF01242 6-pyruvoyl tetrahydropterin synthase RR32_10060 PF03934 Type II secretion system (T2SS), protein K RR32_10065 PF07963 Prokaryotic N-terminal methylation motif RR32_10065 PF11612 Type II secretion system (T2SS), protein J RR32_10070 PF02501 Type II secretion system (T2SS), protein I RR32_10070 PF07963 Prokaryotic N-terminal methylation motif RR32_10075 PF07963 Prokaryotic N-terminal methylation motif RR32_10080 PF00440 Bacterial regulatory proteins, tetR family RR32_10085 PF01026 TatD related DNase RR32_10090 PF07238 PilZ domain RR32_10095 PF13177 DNA polymerase III, delta subunit RR32_10100 PF02348 Cytidylyltransferase RR32_10105 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RR32_10110 PF00005 ABC transporter RR32_10110 PF00664 ABC transporter transmembrane region RR32_10115 PF02472 Biopolymer transport protein ExbD/TolR RR32_10120 PF01618 RR32_10120 RR32_10125 PF02195 ParB-like nuclease domain RR32_10130 PF13614 AAA domain RR32_10135 PF02527 rRNA small subunit methyltransferase G RR32_10140 PF00483 Nucleotidyl transferase RR32_10145 PF01636 Phosphotransferase enzyme family RR32_10150 PF03968 OstA-like protein RR32_10150 PF04453 Organic solvent tolerance protein RR32_10155 PF00639 PPIC-type PPIASE domain RR32_10155 PF09312 SurA N-terminal domain RR32_10155 PF13616 PPIC-type PPIASE domain RR32_10160 PF01116 Fructose-bisphosphate aldolase class-II RR32_10170 PF00162 Phosphoglycerate kinase RR32_10175 PF09996 Uncharacterized protein conserved in bacteria (DUF2237) RR32_10180 PF02545 Maf-like protein RR32_10185 PF08007 Cupin superfamily protein RR32_10190 PF00440 Bacterial regulatory proteins, tetR family RR32_10195 PF01022 Bacterial regulatory protein, arsR family RR32_10200 PF00375 Sodium:dicarboxylate symporter family RR32_10205 PF06912 RR32_10205 RR32_10210 PF09831 RR32_10210 RR32_10215 PF00005 ABC transporter RR32_10215 PF00664 ABC transporter transmembrane region RR32_10220 PF01575 MaoC like domain RR32_10225 PF12625 RR32_10225 RR32_10225 PF12833 Helix-turn-helix domain RR32_10230 PF01597 Glycine cleavage H-protein RR32_10235 PF02146 Sir2 family RR32_10240 PF00474 Sodium:solute symporter family RR32_10245 PF01037 AsnC family RR32_10245 PF13404 AsnC-type helix-turn-helix domain RR32_10250 PF00171 Aldehyde dehydrogenase family RR32_10250 PF01619 Proline dehydrogenase RR32_10250 PF14850 DNA-binding domain of Proline dehydrogenase RR32_10255 PF04229 GrpB protein RR32_10260 PF05958 tRNA (Uracil-5-)-methyltransferase RR32_10270 PF09992 Predicted periplasmic protein (DUF2233) RR32_10275 PF04970 Lecithin retinol acyltransferase RR32_10280 PF04264 YceI-like domain RR32_10285 PF02566 OsmC-like protein RR32_10290 PF00456 Transketolase, thiamine diphosphate binding domain RR32_10290 PF02779 Transketolase, pyrimidine binding domain RR32_10290 PF02780 Transketolase, C-terminal domain RR32_10295 PF00438 S-adenosylmethionine synthetase, N-terminal domain RR32_10295 PF02772 S-adenosylmethionine synthetase, central domain RR32_10295 PF02773 S-adenosylmethionine synthetase, C-terminal domain RR32_10310 PF04186 RR32_10310 RR32_10315 PF13420 Acetyltransferase (GNAT) domain RR32_10320 PF01381 Helix-turn-helix RR32_10325 PF02075 Crossover junction endodeoxyribonuclease RuvC RR32_10330 PF01256 Carbohydrate kinase RR32_10330 PF03853 YjeF-related protein N-terminus RR32_10335 PF08331 RR32_10335 RR32_10335 PF13484 RR32_10335 RR32_10340 PF04055 Radical SAM superfamily RR32_10340 PF06968 Biotin and Thiamin Synthesis associated domain RR32_10355 PF16970 RR32_10355 RR32_10360 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RR32_10360 PF02753 Pili assembly chaperone PapD, C-terminal domain RR32_10365 PF00577 Outer membrane usher protein RR32_10365 PF13953 PapC C-terminal domain RR32_10365 PF13954 PapC N-terminal domain RR32_10370 PF00419 Fimbrial protein RR32_10380 PF12625 RR32_10380 RR32_10380 PF12833 Helix-turn-helix domain RR32_10390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_10390 PF03466 LysR substrate binding domain RR32_10395 PF00892 EamA-like transporter family RR32_10405 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RR32_10410 PF05232 RR32_10410 RR32_10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_10415 PF03466 LysR substrate binding domain RR32_10420 PF00589 Phage integrase family RR32_10420 PF13356 Domain of unknown function (DUF4102) RR32_10435 PF00440 Bacterial regulatory proteins, tetR family RR32_10440 PF01553 Acyltransferase RR32_10445 PF01709 Transcriptional regulator RR32_10450 PF01037 AsnC family RR32_10450 PF13412 Winged helix-turn-helix DNA-binding RR32_10460 PF00005 ABC transporter RR32_10465 PF00528 Binding-protein-dependent transport system inner membrane component RR32_10470 PF00528 Binding-protein-dependent transport system inner membrane component RR32_10475 PF00497 Bacterial extracellular solute-binding proteins, family 3 RR32_10480 PF13417 Glutathione S-transferase, N-terminal domain RR32_10480 PF14497 Glutathione S-transferase, C-terminal domain RR32_10485 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_10485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_10485 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RR32_10490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_10490 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RR32_10495 PF00296 Luciferase-like monooxygenase RR32_10500 PF03180 NLPA lipoprotein RR32_10505 PF03180 NLPA lipoprotein RR32_10510 PF00005 ABC transporter RR32_10510 PF09383 NIL domain RR32_10515 PF00528 Binding-protein-dependent transport system inner membrane component RR32_10520 PF01926 50S ribosome-binding GTPase RR32_10520 PF06071 Protein of unknown function (DUF933) RR32_10525 PF06127 RR32_10525 RR32_10530 PF00027 Cyclic nucleotide-binding domain RR32_10530 PF13545 Crp-like helix-turn-helix domain RR32_10545 PF03591 RR32_10545 RR32_10550 PF05437 RR32_10550 RR32_10555 PF14552 Tautomerase enzyme RR32_10560 PF02222 ATP-grasp domain RR32_10565 PF01909 Nucleotidyltransferase domain RR32_10565 PF01966 HD domain RR32_10565 PF08335 GlnD PII-uridylyltransferase RR32_10570 PF00155 Aminotransferase class I and II RR32_10575 PF01810 RR32_10575 RR32_10580 PF02311 AraC-like ligand binding domain RR32_10580 PF12833 Helix-turn-helix domain RR32_10585 PF00255 Glutathione peroxidase RR32_10590 PF01641 SelR domain RR32_10595 PF00155 Aminotransferase class I and II RR32_10600 PF00375 Sodium:dicarboxylate symporter family RR32_10605 PF00710 Asparaginase RR32_10610 PF02811 PHP domain RR32_10610 PF07733 Bacterial DNA polymerase III alpha subunit RR32_10610 PF14579 Helix-hairpin-helix motif RR32_10615 PF00588 SpoU rRNA Methylase family RR32_10620 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_10620 PF06426 Serine acetyltransferase, N-terminal RR32_10635 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_10635 PF13192 Thioredoxin domain RR32_10640 PF02417 RR32_10640 RR32_10645 PF02417 RR32_10645 RR32_10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_10650 PF03466 LysR substrate binding domain RR32_10655 PF01758 Sodium Bile acid symporter family RR32_10660 PF01022 Bacterial regulatory protein, arsR family RR32_10665 PF03960 ArsC family RR32_10670 PF07235 RR32_10670 RR32_10675 PF07969 Amidohydrolase family RR32_10680 PF00857 Isochorismatase family RR32_10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_10685 PF03466 LysR substrate binding domain RR32_10690 PF00392 Bacterial regulatory proteins, gntR family RR32_10690 PF07729 FCD domain RR32_10695 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RR32_10700 PF01177 Asp/Glu/Hydantoin racemase RR32_10705 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RR32_10710 PF00528 Binding-protein-dependent transport system inner membrane component RR32_10715 PF00005 ABC transporter RR32_10720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RR32_10730 PF00083 Sugar (and other) transporter RR32_10735 PF00296 Luciferase-like monooxygenase RR32_10750 PF01654 RR32_10750 RR32_10755 PF02322 RR32_10755 RR32_10765 PF00155 Aminotransferase class I and II RR32_10765 PF00392 Bacterial regulatory proteins, gntR family RR32_10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_10770 PF03466 LysR substrate binding domain RR32_10775 PF03818 RR32_10775 RR32_10780 PF03817 RR32_10780 RR32_10785 PF00698 Acyl transferase domain RR32_10790 PF10620 RR32_10790 RR32_10795 PF06833 Malonate decarboxylase gamma subunit (MdcE) RR32_10800 PF01039 Carboxyl transferase domain RR32_10805 PF06857 RR32_10805 RR32_10810 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RR32_10815 PF16957 RR32_10815 RR32_10820 PF07690 Major Facilitator Superfamily RR32_10825 PF13302 Acetyltransferase (GNAT) domain RR32_10830 PF04299 Putative FMN-binding domain RR32_10835 PF00155 Aminotransferase class I and II RR32_10835 PF00392 Bacterial regulatory proteins, gntR family RR32_10840 PF04172 RR32_10840 RR32_10845 PF03788 RR32_10845 RR32_10850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_10850 PF03466 LysR substrate binding domain RR32_10855 PF13417 Glutathione S-transferase, N-terminal domain RR32_10855 PF14834 Glutathione S-transferase, C-terminal domain RR32_10860 PF00043 Glutathione S-transferase, C-terminal domain RR32_10860 PF02798 Glutathione S-transferase, N-terminal domain RR32_10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_10865 PF03466 LysR substrate binding domain RR32_10870 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_10875 PF00581 Rhodanese-like domain RR32_10880 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_10880 PF06426 Serine acetyltransferase, N-terminal RR32_10890 PF00266 Aminotransferase class-V RR32_10895 PF01810 RR32_10895 RR32_10900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_10900 PF03466 LysR substrate binding domain RR32_10905 PF00497 Bacterial extracellular solute-binding proteins, family 3 RR32_10910 PF00497 Bacterial extracellular solute-binding proteins, family 3 RR32_10915 PF00005 ABC transporter RR32_10920 PF00528 Binding-protein-dependent transport system inner membrane component RR32_10925 PF00528 Binding-protein-dependent transport system inner membrane component RR32_10930 PF14542 GCN5-related N-acetyl-transferase RR32_10935 PF00072 Response regulator receiver domain RR32_10935 PF00196 Bacterial regulatory proteins, luxR family RR32_10940 PF00072 Response regulator receiver domain RR32_10940 PF00512 His Kinase A (phospho-acceptor) domain RR32_10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_10950 PF01037 AsnC family RR32_10950 PF13412 Winged helix-turn-helix DNA-binding RR32_10955 PF01810 RR32_10955 RR32_10960 PF00717 Peptidase S24-like RR32_10970 PF10685 RR32_10970 RR32_10980 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_10985 PF00199 Catalase RR32_10985 PF06628 Catalase-related immune-responsive RR32_10990 PF14518 Iron-containing redox enzyme RR32_10995 PF02464 Competence-damaged protein RR32_11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_11030 PF03466 LysR substrate binding domain RR32_11035 PF13472 GDSL-like Lipase/Acylhydrolase family RR32_11045 PF13649 Methyltransferase domain RR32_11050 PF00501 AMP-binding enzyme RR32_11050 PF13193 AMP-binding enzyme C-terminal domain RR32_11055 PF00440 Bacterial regulatory proteins, tetR family RR32_11060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_11060 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_11060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_11065 PF01039 Carboxyl transferase domain RR32_11070 PF00378 Enoyl-CoA hydratase/isomerase family RR32_11075 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RR32_11075 PF00364 Biotin-requiring enzyme RR32_11075 PF02785 Biotin carboxylase C-terminal domain RR32_11075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RR32_11080 PF00682 HMGL-like RR32_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_11085 PF03466 LysR substrate binding domain RR32_11090 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RR32_11095 PF13622 Thioesterase-like superfamily RR32_11100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_11100 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_11100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_11100 PF12418 RR32_11100 RR32_11100 PF12806 RR32_11100 RR32_11105 PF03061 Thioesterase superfamily RR32_11110 PF07690 Major Facilitator Superfamily RR32_11120 PF01144 Coenzyme A transferase RR32_11125 PF01144 Coenzyme A transferase RR32_11130 PF07690 Major Facilitator Superfamily RR32_11135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_11135 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_11135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_11140 PF00378 Enoyl-CoA hydratase/isomerase family RR32_11145 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_11150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RR32_11150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RR32_11155 PF00108 Thiolase, N-terminal domain RR32_11155 PF02803 Thiolase, C-terminal domain RR32_11160 PF01614 Bacterial transcriptional regulator RR32_11160 PF09339 IclR helix-turn-helix domain RR32_11165 PF07690 Major Facilitator Superfamily RR32_11170 PF06271 RR32_11170 RR32_11175 PF03060 Nitronate monooxygenase RR32_11180 PF00378 Enoyl-CoA hydratase/isomerase family RR32_11185 PF01614 Bacterial transcriptional regulator RR32_11185 PF09339 IclR helix-turn-helix domain RR32_11190 PF02515 CoA-transferase family III RR32_11195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_11195 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_11195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_11200 PF07690 Major Facilitator Superfamily RR32_11205 PF13419 Haloacid dehalogenase-like hydrolase RR32_11210 PF00266 Aminotransferase class-V RR32_11215 PF01266 FAD dependent oxidoreductase RR32_11220 PF00528 Binding-protein-dependent transport system inner membrane component RR32_11225 PF00005 ABC transporter RR32_11230 PF13343 Bacterial extracellular solute-binding protein RR32_11235 PF00392 Bacterial regulatory proteins, gntR family RR32_11235 PF07702 UTRA domain RR32_11240 PF01494 FAD binding domain RR32_11245 PF01614 Bacterial transcriptional regulator RR32_11245 PF09339 IclR helix-turn-helix domain RR32_11250 PF02525 Flavodoxin-like fold RR32_11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_11255 PF03466 LysR substrate binding domain RR32_11270 PF01738 Dienelactone hydrolase family RR32_11275 PF12697 Alpha/beta hydrolase family RR32_11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_11280 PF03466 LysR substrate binding domain RR32_11285 PF00440 Bacterial regulatory proteins, tetR family RR32_11300_1 PF00665 Integrase core domain RR32_11300_2 PF00665 Integrase core domain RR32_11320 PF03061 Thioesterase superfamily RR32_11325 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_11330 PF07848 PaaX-like protein RR32_11330 PF08223 PaaX-like protein C-terminal domain RR32_11335 PF00501 AMP-binding enzyme RR32_11335 PF14535 AMP-binding enzyme C-terminal domain RR32_11340 PF00108 Thiolase, N-terminal domain RR32_11340 PF02803 Thiolase, C-terminal domain RR32_11345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RR32_11345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RR32_11350 PF00378 Enoyl-CoA hydratase/isomerase family RR32_11355 PF00378 Enoyl-CoA hydratase/isomerase family RR32_11360 PF00111 2Fe-2S iron-sulfur cluster binding domain RR32_11360 PF00175 Oxidoreductase NAD-binding domain RR32_11360 PF00970 Oxidoreductase FAD-binding domain RR32_11365 PF01883 Domain of unknown function DUF59 RR32_11370 PF05138 Phenylacetic acid catabolic protein RR32_11375 PF06243 Phenylacetic acid degradation B RR32_11380 PF05138 Phenylacetic acid catabolic protein RR32_11385 PF00171 Aldehyde dehydrogenase family RR32_11385 PF01575 MaoC like domain RR32_11390 PF03313 RR32_11390 RR32_11390 PF03315 Serine dehydratase beta chain RR32_11395 PF13520 Amino acid permease RR32_11400 PF00171 Aldehyde dehydrogenase family RR32_11405 PF00083 Sugar (and other) transporter RR32_11410 PF08448 PAS fold RR32_11410 PF12833 Helix-turn-helix domain RR32_11415 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_11420 PF13510 2Fe-2S iron-sulfur cluster binding domain RR32_11425 PF01266 FAD dependent oxidoreductase RR32_11430 PF05544 Proline racemase RR32_11435 PF00392 Bacterial regulatory proteins, gntR family RR32_11435 PF07729 FCD domain RR32_11440 PF00892 EamA-like transporter family RR32_11445 PF00701 Dihydrodipicolinate synthetase family RR32_11455 PF03891 RR32_11455 RR32_11455 PF11720 Peptidase inhibitor I78 family RR32_11460 PF13411 MerR HTH family regulatory protein RR32_11470 PF02677 RR32_11470 RR32_11475 PF00583 Acetyltransferase (GNAT) family RR32_11480 PF06224 RR32_11480 RR32_11485 PF07690 Major Facilitator Superfamily RR32_11490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RR32_11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_11495 PF03466 LysR substrate binding domain RR32_11500 PF13539 D-alanyl-D-alanine carboxypeptidase RR32_11510 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) RR32_11515 PF05936 RR32_11515 RR32_11520 PF06812 RR32_11520 RR32_11525 PF00004 ATPase family associated with various cellular activities (AAA) RR32_11525 PF07724 AAA domain (Cdc48 subfamily) RR32_11525 PF10431 C-terminal, D2-small domain, of ClpB protein RR32_11530 PF05488 PAAR motif RR32_11535 PF00691 OmpA family RR32_11540 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) RR32_11555 PF05591 RR32_11555 RR32_11565 PF03781 Sulfatase-modifying factor enzyme 1 RR32_11580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_11580 PF03466 LysR substrate binding domain RR32_11585 PF07690 Major Facilitator Superfamily RR32_11595 PF00528 Binding-protein-dependent transport system inner membrane component RR32_11600 PF00005 ABC transporter RR32_11605 PF09084 NMT1/THI5 like RR32_11610 PF01425 Amidase RR32_11615 PF08753 NikR C terminal nickel binding domain RR32_11630 PF01638 HxlR-like helix-turn-helix RR32_11635 PF02525 Flavodoxin-like fold RR32_11640 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RR32_11640 PF00364 Biotin-requiring enzyme RR32_11640 PF02626 Allophanate hydrolase subunit 2 RR32_11640 PF02682 Allophanate hydrolase subunit 1 RR32_11640 PF02785 Biotin carboxylase C-terminal domain RR32_11640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RR32_11645 PF09347 Domain of unknown function (DUF1989) RR32_11650 PF09347 Domain of unknown function (DUF1989) RR32_11655 PF08240 Alcohol dehydrogenase GroES-like domain RR32_11655 PF13823 Alcohol dehydrogenase GroES-associated RR32_11660 PF12146 Putative lysophospholipase RR32_11665 PF12625 RR32_11665 RR32_11665 PF12833 Helix-turn-helix domain RR32_11670 PF10604 Polyketide cyclase / dehydrase and lipid transport RR32_11675 PF00440 Bacterial regulatory proteins, tetR family RR32_11695 PF00654 Voltage gated chloride channel RR32_11700 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain RR32_11700 PF00364 Biotin-requiring enzyme RR32_11700 PF02785 Biotin carboxylase C-terminal domain RR32_11700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RR32_11705 PF02626 Allophanate hydrolase subunit 2 RR32_11705 PF02682 Allophanate hydrolase subunit 1 RR32_11710 PF07286 Protein of unknown function (DUF1445) RR32_11715 PF03746 LamB/YcsF family RR32_11720 PF01566 RR32_11720 RR32_11725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_11725 PF03466 LysR substrate binding domain RR32_11735 PF04542 Sigma-70 region 2 RR32_11735 PF08281 Sigma-70, region 4 RR32_11740 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) RR32_11745 PF05114 Protein of unknown function (DUF692) RR32_11820 PF05954 Phage late control gene D protein (GPD) RR32_11820 PF10106 RR32_11820 RR32_11820 PF13296 RR32_11820 RR32_11825 PF13354 Beta-lactamase enzyme family RR32_11830 PF13419 Haloacid dehalogenase-like hydrolase RR32_11835 PF13508 Acetyltransferase (GNAT) domain RR32_11845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RR32_11845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RR32_11850 PF08856 RR32_11850 RR32_11860 PF07739 TipAS antibiotic-recognition domain RR32_11860 PF13411 MerR HTH family regulatory protein RR32_11865 PF00313 'Cold-shock' DNA-binding domain RR32_11870 PF00117 Glutamine amidotransferase class-I RR32_11875 PF01053 Cys/Met metabolism PLP-dependent enzyme RR32_11880 PF13304 AAA domain RR32_11880 PF13476 AAA domain RR32_11885 PF01037 AsnC family RR32_11885 PF13404 AsnC-type helix-turn-helix domain RR32_11890 PF06865 Protein of unknown function (DUF1255) RR32_11895 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_11900 PF13714 Phosphoenolpyruvate phosphomutase RR32_11905 PF13302 Acetyltransferase (GNAT) domain RR32_11910 PF00593 TonB dependent receptor RR32_11910 PF07715 TonB-dependent Receptor Plug Domain RR32_11920 PF05229 RR32_11920 RR32_11925 PF07690 Major Facilitator Superfamily RR32_11935 PF07690 Major Facilitator Superfamily RR32_11940 PF00440 Bacterial regulatory proteins, tetR family RR32_11945 PF00892 EamA-like transporter family RR32_11950 PF01037 AsnC family RR32_11950 PF13412 Winged helix-turn-helix DNA-binding RR32_11965 PF00563 EAL domain RR32_11970 PF01699 Sodium/calcium exchanger protein RR32_11975 PF07690 Major Facilitator Superfamily RR32_11980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_11980 PF03466 LysR substrate binding domain RR32_11985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_11985 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_11985 PF12418 RR32_11985 RR32_11985 PF12806 RR32_11985 RR32_11990 PF01575 MaoC like domain RR32_11995 PF00106 short chain dehydrogenase RR32_12000 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_12005 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_12010 PF00488 MutS domain V RR32_12010 PF01624 MutS domain I RR32_12010 PF05188 MutS domain II RR32_12010 PF05190 MutS family domain IV RR32_12010 PF05192 MutS domain III RR32_12015 PF13673 Acetyltransferase (GNAT) domain RR32_12020 PF00037 4Fe-4S binding domain RR32_12020 PF11953 Domain of unknown function (DUF3470) RR32_12025 PF08291 Peptidase M15 RR32_12030 PF01596 O-methyltransferase RR32_12035 PF00582 Universal stress protein family RR32_12040 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_12040 PF14602 Hexapeptide repeat of succinyl-transferase RR32_12045 PF01205 Uncharacterized protein family UPF0029 RR32_12045 PF09186 Domain of unknown function (DUF1949) RR32_12050 PF13437 HlyD family secretion protein RR32_12050 PF13533 Biotin-lipoyl like RR32_12055 PF00005 ABC transporter RR32_12055 PF00664 ABC transporter transmembrane region RR32_12060 PF02321 Outer membrane efflux protein RR32_12065 PF00005 ABC transporter RR32_12065 PF12399 Branched-chain amino acid ATP-binding cassette transporter RR32_12070 PF03968 OstA-like protein RR32_12075 PF06835 Lipopolysaccharide-assembly, LptC-related RR32_12080 PF08282 haloacid dehalogenase-like hydrolase RR32_12085 PF00571 CBS domain RR32_12085 PF01380 SIS domain RR32_12090 PF01406 tRNA synthetases class I (C) catalytic domain RR32_12090 PF09190 DALR domain RR32_12100 PF00440 Bacterial regulatory proteins, tetR family RR32_12105 PF00248 Aldo/keto reductase family RR32_12110 PF01638 HxlR-like helix-turn-helix RR32_12115 PF07690 Major Facilitator Superfamily RR32_12125 PF00665 Integrase core domain RR32_12140 PF04233 RR32_12140 RR32_12155 PF03807 NADP oxidoreductase coenzyme F420-dependent RR32_12155 PF14748 Pyrroline-5-carboxylate reductase dimerisation RR32_12165 PF00313 'Cold-shock' DNA-binding domain RR32_12170 PF01810 RR32_12170 RR32_12175 PF05838 Glycosyl hydrolase 108 RR32_12175 PF09374 Predicted Peptidoglycan domain RR32_12185 PF00717 Peptidase S24-like RR32_12185 PF12844 Helix-turn-helix domain RR32_12200 PF02601 RR32_12200 RR32_12200 PF13742 RR32_12200 RR32_12205 PF02609 Exonuclease VII small subunit RR32_12215 PF01810 RR32_12215 RR32_12225 PF03860 Domain of Unknown Function (DUF326) RR32_12230 PF04828 Glutathione-dependent formaldehyde-activating enzyme RR32_12235 PF00376 MerR family regulatory protein RR32_12235 PF09278 MerR, DNA binding RR32_12240 PF00122 E1-E2 ATPase RR32_12240 PF00403 Heavy-metal-associated domain RR32_12240 PF00702 haloacid dehalogenase-like hydrolase RR32_12245 PF00403 Heavy-metal-associated domain RR32_12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_12250 PF03466 LysR substrate binding domain RR32_12255 PF00355 Rieske [2Fe-2S] domain RR32_12255 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RR32_12260 PF00866 Ring hydroxylating beta subunit RR32_12265 PF00111 2Fe-2S iron-sulfur cluster binding domain RR32_12265 PF00175 Oxidoreductase NAD-binding domain RR32_12265 PF00970 Oxidoreductase FAD-binding domain RR32_12270 PF00106 short chain dehydrogenase RR32_12275 PF03594 RR32_12275 RR32_12280 PF07690 Major Facilitator Superfamily RR32_12285 PF03573 outer membrane porin, OprD family RR32_12290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RR32_12290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RR32_12295 PF00270 DEAD/DEAH box helicase RR32_12295 PF00271 Helicase conserved C-terminal domain RR32_12295 PF04408 Helicase associated domain (HA2) RR32_12295 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RR32_12295 PF11898 RR32_12295 RR32_12300 PF00578 AhpC/TSA family RR32_12300 PF10417 C-terminal domain of 1-Cys peroxiredoxin RR32_12305 PF13619 RR32_12305 RR32_12310 PF01596 O-methyltransferase RR32_12315 PF07866 Protein of unknown function (DUF1653) RR32_12320 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_12320 PF13192 Thioredoxin domain RR32_12330 PF00043 Glutathione S-transferase, C-terminal domain RR32_12330 PF02798 Glutathione S-transferase, N-terminal domain RR32_12335 PF00932 Lamin Tail Domain RR32_12340 PF02390 Putative methyltransferase RR32_12345 PF02798 Glutathione S-transferase, N-terminal domain RR32_12350 PF03807 NADP oxidoreductase coenzyme F420-dependent RR32_12350 PF10728 Domain of unknown function (DUF2520) RR32_12355 PF00691 OmpA family RR32_12365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RR32_12365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RR32_12375 PF01170 Putative RNA methylase family UPF0020 RR32_12375 PF02926 THUMP domain RR32_12375 PF10672 S-adenosylmethionine-dependent methyltransferase RR32_12385 PF02464 Competence-damaged protein RR32_12390 PF00004 ATPase family associated with various cellular activities (AAA) RR32_12390 PF02861 Clp amino terminal domain RR32_12390 PF07724 AAA domain (Cdc48 subfamily) RR32_12390 PF10431 C-terminal, D2-small domain, of ClpB protein RR32_12395 PF01551 Peptidase family M23 RR32_12400 PF00583 Acetyltransferase (GNAT) family RR32_12405 PF02566 OsmC-like protein RR32_12410 PF00027 Cyclic nucleotide-binding domain RR32_12410 PF00325 Bacterial regulatory proteins, crp family RR32_12415 PF00248 Aldo/keto reductase family RR32_12420 PF01435 Peptidase family M48 RR32_12430 PF00709 Adenylosuccinate synthetase RR32_12435 PF13393 Histidyl-tRNA synthetase RR32_12440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RR32_12440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RR32_12445 PF01411 tRNA synthetases class II (A) RR32_12445 PF02272 DHHA1 domain RR32_12445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RR32_12450 PF00696 Amino acid kinase family RR32_12450 PF01842 ACT domain RR32_12450 PF13840 ACT domain RR32_12455 PF02599 Global regulator protein family RR32_12460 PF01351 Ribonuclease HII RR32_12470 PF01292 Prokaryotic cytochrome b561 RR32_12475 PF00962 Adenosine/AMP deaminase RR32_12480 PF00860 Permease family RR32_12490 PF13738 Pyridine nucleotide-disulphide oxidoreductase RR32_12495 PF00106 short chain dehydrogenase RR32_12500 PF10118 RR32_12500 RR32_12505 PF02678 Pirin RR32_12510 PF00440 Bacterial regulatory proteins, tetR family RR32_12515 PF10118 RR32_12515 RR32_12520 PF00106 short chain dehydrogenase RR32_12525 PF13738 Pyridine nucleotide-disulphide oxidoreductase RR32_12530 PF04072 Leucine carboxyl methyltransferase RR32_12535 PF12625 RR32_12535 RR32_12535 PF12833 Helix-turn-helix domain RR32_12540 PF00743 Flavin-binding monooxygenase-like RR32_12545 PF00106 short chain dehydrogenase RR32_12550 PF07859 alpha/beta hydrolase fold RR32_12555 PF00732 GMC oxidoreductase RR32_12555 PF05199 GMC oxidoreductase RR32_12560 PF02566 OsmC-like protein RR32_12560 PF02624 YcaO-like family RR32_12565 PF03573 outer membrane porin, OprD family RR32_12570 PF07690 Major Facilitator Superfamily RR32_12575 PF00884 Sulfatase RR32_12580 PF03781 Sulfatase-modifying factor enzyme 1 RR32_12585 PF03573 outer membrane porin, OprD family RR32_12590 PF00355 Rieske [2Fe-2S] domain RR32_12595 PF00111 2Fe-2S iron-sulfur cluster binding domain RR32_12595 PF00175 Oxidoreductase NAD-binding domain RR32_12600 PF00392 Bacterial regulatory proteins, gntR family RR32_12600 PF07729 FCD domain RR32_12605 PF01047 MarR family RR32_12610 PF07690 Major Facilitator Superfamily RR32_12615 PF00378 Enoyl-CoA hydratase/isomerase family RR32_12620 PF00171 Aldehyde dehydrogenase family RR32_12625 PF00501 AMP-binding enzyme RR32_12630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_12630 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_12630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_12635 PF03573 outer membrane porin, OprD family RR32_12640 PF03061 Thioesterase superfamily RR32_12645 PF07519 Tannase and feruloyl esterase RR32_12650 PF00892 EamA-like transporter family RR32_12660 PF12625 RR32_12660 RR32_12660 PF12833 Helix-turn-helix domain RR32_12665 PF00171 Aldehyde dehydrogenase family RR32_12670 PF00324 Amino acid permease RR32_12675 PF04958 Arginine N-succinyltransferase beta subunit RR32_12680 PF00202 Aminotransferase class-III RR32_12685 PF01037 AsnC family RR32_12685 PF13404 AsnC-type helix-turn-helix domain RR32_12690 PF00171 Aldehyde dehydrogenase family RR32_12695 PF12680 SnoaL-like domain RR32_12700 PF00392 Bacterial regulatory proteins, gntR family RR32_12700 PF07729 FCD domain RR32_12705 PF02743 Cache domain RR32_12710 PF00324 Amino acid permease RR32_12715 PF01266 FAD dependent oxidoreductase RR32_12720 PF00324 Amino acid permease RR32_12735 PF00440 Bacterial regulatory proteins, tetR family RR32_12745 PF08857 Putative ParB-like nuclease RR32_12750 PF03180 NLPA lipoprotein RR32_12760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RR32_12760 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_12765 PF00764 Arginosuccinate synthase RR32_12770 PF00990 GGDEF domain RR32_12775 PF01979 Amidohydrolase family RR32_12780 PF00929 Exonuclease RR32_12790 PF00400 WD domain, G-beta repeat RR32_12795 PF00925 GTP cyclohydrolase II RR32_12800 PF03781 Sulfatase-modifying factor enzyme 1 RR32_12810 PF05977 Transmembrane secretion effector RR32_12815 PF00593 TonB dependent receptor RR32_12820 PF13417 Glutathione S-transferase, N-terminal domain RR32_12820 PF14497 Glutathione S-transferase, C-terminal domain RR32_12825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RR32_12830 PF00005 ABC transporter RR32_12835 PF00528 Binding-protein-dependent transport system inner membrane component RR32_12840 PF00528 Binding-protein-dependent transport system inner membrane component RR32_12845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RR32_12850 PF01464 Transglycosylase SLT domain RR32_12850 PF01476 LysM domain RR32_12855 PF00075 RNase H RR32_12855 PF00929 Exonuclease RR32_12865 PF00293 NUDIX domain RR32_12865 PF09297 NADH pyrophosphatase zinc ribbon domain RR32_12870 PF07859 alpha/beta hydrolase fold RR32_12875 PF04972 BON domain RR32_12880 PF02021 Uncharacterised protein family UPF0102 RR32_12885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RR32_12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_12890 PF03466 LysR substrate binding domain RR32_12895 PF01810 RR32_12895 RR32_12900 PF01545 Cation efflux family RR32_12905 PF13411 MerR HTH family regulatory protein RR32_12915 PF01494 FAD binding domain RR32_12920 PF01494 FAD binding domain RR32_12925 PF00557 Metallopeptidase family M24 RR32_12925 PF05195 Aminopeptidase P, N-terminal domain RR32_12930 PF03695 Uncharacterised protein family (UPF0149) RR32_12940 PF05164 Cell division protein ZapA RR32_12955 PF01812 5-formyltetrahydrofolate cyclo-ligase family RR32_12960 PF00691 OmpA family RR32_12960 PF04355 SmpA / OmlA family RR32_12970 PF00872 RR32_12970 RR32_12980 PF00691 OmpA family RR32_12980 PF04355 SmpA / OmlA family RR32_12985 PF03895 YadA-like C-terminal region RR32_12985 PF05658 Head domain of trimeric autotransporter adhesin RR32_12985 PF05662 Coiled stalk of trimeric autotransporter adhesin RR32_12985 PF13018 RR32_12985 RR32_12990 PF00691 OmpA family RR32_12990 PF04355 SmpA / OmlA family RR32_12995 PF03895 YadA-like C-terminal region RR32_12995 PF05658 Head domain of trimeric autotransporter adhesin RR32_12995 PF05662 Coiled stalk of trimeric autotransporter adhesin RR32_12995 PF13018 RR32_12995 RR32_13000 PF00004 ATPase family associated with various cellular activities (AAA) RR32_13000 PF02190 ATP-dependent protease La (LON) domain RR32_13000 PF05362 Lon protease (S16) C-terminal proteolytic domain RR32_13005 PF02590 Predicted SPOUT methyltransferase RR32_13010 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RR32_13015 PF03724 META domain RR32_13015 PF14302 RR32_13015 RR32_13020 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RR32_13020 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RR32_13025 PF04060 Putative Fe-S cluster RR32_13025 PF14697 4Fe-4S dicluster domain RR32_13030 PF00633 Helix-hairpin-helix motif RR32_13030 PF00730 HhH-GPD superfamily base excision DNA repair protein RR32_13030 PF10576 Iron-sulfur binding domain of endonuclease III RR32_13040 PF00406 Adenylate kinase RR32_13040 PF05191 Adenylate kinase, active site lid RR32_13055 PF00905 Penicillin binding protein transpeptidase domain RR32_13055 PF03717 Penicillin-binding Protein dimerisation domain RR32_13060 PF03602 Conserved hypothetical protein 95 RR32_13070 PF04955 RR32_13070 RR32_13075 PF02492 CobW/HypB/UreG, nucleotide-binding domain RR32_13080 PF01730 UreF RR32_13085 PF02814 UreE urease accessory protein, N-terminal domain RR32_13085 PF05194 UreE urease accessory protein, C-terminal domain RR32_13090 PF00449 Urease alpha-subunit, N-terminal domain RR32_13090 PF01979 Amidohydrolase family RR32_13095 PF00699 Urease beta subunit RR32_13100 PF00547 Urease, gamma subunit RR32_13105 PF01774 UreD urease accessory protein RR32_13115 PF04170 NlpE N-terminal domain RR32_13120 PF00463 Isocitrate lyase family RR32_13125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_13125 PF03466 LysR substrate binding domain RR32_13130 PF00571 CBS domain RR32_13130 PF01595 RR32_13130 RR32_13130 PF03471 Transporter associated domain RR32_13135 PF03600 Citrate transporter RR32_13145 PF09998 RR32_13145 RR32_13150 PF00009 Elongation factor Tu GTP binding domain RR32_13155 PF01507 Phosphoadenosine phosphosulfate reductase family RR32_13160 PF14052 Capsule assembly protein Wzi RR32_13165 PF00152 tRNA synthetases class II (D, K and N) RR32_13165 PF01336 OB-fold nucleic acid binding domain RR32_13170 PF05728 Uncharacterised protein family (UPF0227) RR32_13175 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RR32_13180 PF00301 Rubredoxin RR32_13185 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_13190 PF00561 alpha/beta hydrolase fold RR32_13195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_13195 PF03466 LysR substrate binding domain RR32_13200 PF05036 Sporulation related domain RR32_13205 PF02503 Polyphosphate kinase middle domain RR32_13205 PF13089 Polyphosphate kinase N-terminal domain RR32_13205 PF13090 Polyphosphate kinase C-terminal domain RR32_13210 PF00912 Transglycosylase RR32_13215 PF01694 Rhomboid family RR32_13220 PF02687 RR32_13220 RR32_13225 PF00005 ABC transporter RR32_13230 PF13472 GDSL-like Lipase/Acylhydrolase family RR32_13235 PF00484 Carbonic anhydrase RR32_13240 PF12697 Alpha/beta hydrolase family RR32_13250 PF00593 TonB dependent receptor RR32_13250 PF07715 TonB-dependent Receptor Plug Domain RR32_13255 PF01106 NifU-like domain RR32_13255 PF01521 Iron-sulphur cluster biosynthesis RR32_13260 PF01694 Rhomboid family RR32_13265 PF00884 Sulfatase RR32_13270 PF03781 Sulfatase-modifying factor enzyme 1 RR32_13285 PF00291 Pyridoxal-phosphate dependent enzyme RR32_13290 PF01384 RR32_13290 RR32_13300 PF00809 Pterin binding enzyme RR32_13300 PF02310 B12 binding domain RR32_13300 PF02574 Homocysteine S-methyltransferase RR32_13300 PF02607 B12 binding domain RR32_13300 PF02965 Vitamin B12 dependent methionine synthase, activation domain RR32_13310 PF01263 Aldose 1-epimerase RR32_13315 PF07690 Major Facilitator Superfamily RR32_13320 PF12833 Helix-turn-helix domain RR32_13325 PF04960 Glutaminase RR32_13330 PF01327 Polypeptide deformylase RR32_13335 PF07690 Major Facilitator Superfamily RR32_13345 PF00205 Thiamine pyrophosphate enzyme, central domain RR32_13345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RR32_13345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RR32_13350 PF00171 Aldehyde dehydrogenase family RR32_13355 PF01958 Domain of unknown function DUF108 RR32_13355 PF03447 Homoserine dehydrogenase, NAD binding domain RR32_13360 PF00106 short chain dehydrogenase RR32_13365 PF12697 Alpha/beta hydrolase family RR32_13370 PF07883 Cupin domain RR32_13375 PF07690 Major Facilitator Superfamily RR32_13380 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_13380 PF14759 Reductase C-terminal RR32_13385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RR32_13390 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_13395 PF00355 Rieske [2Fe-2S] domain RR32_13405 PF00355 Rieske [2Fe-2S] domain RR32_13410 PF01614 Bacterial transcriptional regulator RR32_13410 PF09339 IclR helix-turn-helix domain RR32_13430 PF04973 RR32_13430 RR32_13435 PF00378 Enoyl-CoA hydratase/isomerase family RR32_13440 PF13994 RR32_13440 RR32_13445 PF13641 Glycosyltransferase like family 2 RR32_13450 PF01522 Polysaccharide deacetylase RR32_13450 PF14883 Hypothetical glycosyl hydrolase family 13 RR32_13455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RR32_13460 PF07152 YaeQ protein RR32_13465 PF00375 Sodium:dicarboxylate symporter family RR32_13470 PF02492 CobW/HypB/UreG, nucleotide-binding domain RR32_13480 PF03061 Thioesterase superfamily RR32_13485 PF01914 RR32_13485 RR32_13490 PF02028 BCCT family transporter RR32_13495 PF02028 BCCT family transporter RR32_13500 PF00440 Bacterial regulatory proteins, tetR family RR32_13500 PF13977 Bacterial transcriptional repressor RR32_13505 PF00171 Aldehyde dehydrogenase family RR32_13510 PF00732 GMC oxidoreductase RR32_13510 PF05199 GMC oxidoreductase RR32_13515 PF06039 RR32_13515 RR32_13525 PF02574 Homocysteine S-methyltransferase RR32_13530 PF13520 Amino acid permease RR32_13535 PF07819 PGAP1-like protein RR32_13540 PF06912 RR32_13540 RR32_13545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_13545 PF03466 LysR substrate binding domain RR32_13550 PF00701 Dihydrodipicolinate synthetase family RR32_13555 PF00083 Sugar (and other) transporter RR32_13560 PF03573 outer membrane porin, OprD family RR32_13570 PF05488 PAAR motif RR32_13600 PF00665 Integrase core domain RR32_13610 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RR32_13610 PF04851 Type III restriction enzyme, res subunit RR32_13610 PF12008 Type I restriction and modification enzyme - subunit R C terminal RR32_13620 PF14281 RR32_13620 RR32_13630 PF01420 Type I restriction modification DNA specificity domain RR32_13635 PF00665 Integrase core domain RR32_13660 PF07690 Major Facilitator Superfamily RR32_13665 PF00529 HlyD family secretion protein RR32_13665 PF16576 RR32_13665 RR32_13670 PF03061 Thioesterase superfamily RR32_13675 PF00490 Delta-aminolevulinic acid dehydratase RR32_13680 PF01266 FAD dependent oxidoreductase RR32_13685 PF01370 NAD dependent epimerase/dehydratase family RR32_13685 PF08338 Domain of unknown function (DUF1731) RR32_13700 PF02566 OsmC-like protein RR32_13705 PF00149 Calcineurin-like phosphoesterase RR32_13705 PF12320 Type 5 capsule protein repressor C-terminal domain RR32_13710 PF13476 AAA domain RR32_13710 PF13558 Putative exonuclease SbcCD, C subunit RR32_13715 PF02673 RR32_13715 RR32_13720 PF01168 Alanine racemase, N-terminal domain RR32_13725 PF00437 Type II/IV secretion system protein RR32_13730 PF00437 Type II/IV secretion system protein RR32_13735 PF01475 Ferric uptake regulator family RR32_13740 PF04355 SmpA / OmlA family RR32_13745 PF03658 RnfH family Ubiquitin RR32_13755 PF01814 Hemerythrin HHE cation binding domain RR32_13760 PF13230 Glutamine amidotransferases class-II RR32_13765 PF13444 Acetyltransferase (GNAT) domain RR32_13770 PF00696 Amino acid kinase family RR32_13775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RR32_13775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RR32_13775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RR32_13780 PF00692 dUTPase RR32_13785 PF00580 UvrD/REP helicase N-terminal domain RR32_13785 PF13361 UvrD-like helicase C-terminal domain RR32_13790 PF00691 OmpA family RR32_13795 PF01553 Acyltransferase RR32_13805 PF03775 Septum formation inhibitor MinC, C-terminal domain RR32_13810 PF13614 AAA domain RR32_13815 PF03776 Septum formation topological specificity factor MinE RR32_13825 PF01810 RR32_13825 RR32_13830 PF01580 FtsK/SpoIIIE family RR32_13830 PF09397 Ftsk gamma domain RR32_13830 PF13491 RR32_13830 RR32_13835 PF07992 Pyridine nucleotide-disulphide oxidoreductase RR32_13840 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RR32_13845 PF04376 RR32_13845 RR32_13845 PF04377 RR32_13845 RR32_13850 PF00583 Acetyltransferase (GNAT) family RR32_13855 PF10118 RR32_13855 RR32_13860 PF10118 RR32_13860 RR32_13865 PF00009 Elongation factor Tu GTP binding domain RR32_13865 PF03143 Elongation factor Tu C-terminal domain RR32_13865 PF03144 Elongation factor Tu domain 2 RR32_13870 PF00009 Elongation factor Tu GTP binding domain RR32_13870 PF00679 Elongation factor G C-terminus RR32_13870 PF03144 Elongation factor Tu domain 2 RR32_13870 PF03764 Elongation factor G, domain IV RR32_13870 PF14492 Elongation Factor G, domain II RR32_13875 PF00177 Ribosomal protein S7p/S5e RR32_13880 PF00164 Ribosomal protein S12/S23 RR32_13885 PF12787 RR32_13885 RR32_13890 PF00109 Beta-ketoacyl synthase, N-terminal domain RR32_13890 PF02801 Beta-ketoacyl synthase, C-terminal domain RR32_13895 PF03653 RR32_13895 RR32_13900 PF02678 Pirin RR32_13900 PF05726 Pirin C-terminal cupin domain RR32_13910 PF00795 Carbon-nitrogen hydrolase RR32_13910 PF02540 NAD synthase RR32_13925 PF00111 2Fe-2S iron-sulfur cluster binding domain RR32_13925 PF00175 Oxidoreductase NAD-binding domain RR32_13925 PF00970 Oxidoreductase FAD-binding domain RR32_13930 PF00171 Aldehyde dehydrogenase family RR32_13935 PF00355 Rieske [2Fe-2S] domain RR32_13935 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RR32_13940 PF07859 alpha/beta hydrolase fold RR32_13945 PF02028 BCCT family transporter RR32_13950 PF00180 Isocitrate/isopropylmalate dehydrogenase RR32_13955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_13955 PF03466 LysR substrate binding domain RR32_13960 PF07396 Phosphate-selective porin O and P RR32_13970 PF00037 4Fe-4S binding domain RR32_13975 PF01467 Cytidylyltransferase RR32_13980 PF01668 SmpB protein RR32_13985 PF03358 NADPH-dependent FMN reductase RR32_13990 PF02578 Multi-copper polyphenol oxidoreductase laccase RR32_13995 PF00849 RNA pseudouridylate synthase RR32_13995 PF01479 S4 domain RR32_14000 PF13525 Outer membrane lipoprotein RR32_14005 PF01807 CHC2 zinc finger RR32_14005 PF08275 DNA primase catalytic core, N-terminal domain RR32_14005 PF10410 DnaB-helicase binding domain of primase RR32_14005 PF13662 Toprim domain RR32_14010 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RR32_14010 PF01488 Shikimate / quinate 5-dehydrogenase RR32_14010 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RR32_14015 PF13181 Tetratricopeptide repeat RR32_14015 PF13432 Tetratricopeptide repeat RR32_14015 PF14559 Tetratricopeptide repeat RR32_14020 PF03550 Outer membrane lipoprotein LolB RR32_14025 PF00288 GHMP kinases N terminal domain RR32_14025 PF08544 GHMP kinases C terminal RR32_14050 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RR32_14050 PF14572 Phosphoribosyl synthetase-associated domain RR32_14055 PF01386 Ribosomal L25p family RR32_14060 PF01195 Peptidyl-tRNA hydrolase RR32_14065 PF02261 Aspartate decarboxylase RR32_14070 PF14345 RR32_14070 RR32_14075 PF09925 RR32_14075 RR32_14075 PF14351 RR32_14075 RR32_14080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RR32_14085 PF13419 Haloacid dehalogenase-like hydrolase RR32_14090 PF08543 Phosphomethylpyrimidine kinase RR32_14095 PF01476 LysM domain RR32_14095 PF04972 BON domain RR32_14100 PF00550 Phosphopantetheine attachment site RR32_14105 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_14110 PF00698 Acyl transferase domain RR32_14115 PF01783 Ribosomal L32p protein family RR32_14120 PF02620 RR32_14120 RR32_14125 PF04315 RR32_14125 RR32_14130 PF01300 Telomere recombination RR32_14135 PF02616 ScpA/B protein RR32_14140 PF04079 Putative transcriptional regulators (Ypuh-like) RR32_14145 PF00849 RNA pseudouridylate synthase RR32_14145 PF01479 S4 domain RR32_14150 PF13500 AAA domain RR32_14155 PF08241 Methyltransferase domain RR32_14160 PF00155 Aminotransferase class I and II RR32_14165 PF00202 Aminotransferase class-III RR32_14175 PF02358 Trehalose-phosphatase RR32_14180 PF00982 Glycosyltransferase family 20 RR32_14185 PF07690 Major Facilitator Superfamily RR32_14190 PF00210 Ferritin-like domain RR32_14195 PF00533 BRCA1 C Terminus (BRCT) domain RR32_14195 PF01653 NAD-dependent DNA ligase adenylation domain RR32_14195 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RR32_14195 PF03120 NAD-dependent DNA ligase OB-fold domain RR32_14195 PF12826 Helix-hairpin-helix motif RR32_14195 PF14520 Helix-hairpin-helix domain RR32_14200 PF04354 ZipA, C-terminal FtsZ-binding domain RR32_14205 PF02463 RecF/RecN/SMC N terminal domain RR32_14210 PF00392 Bacterial regulatory proteins, gntR family RR32_14210 PF07729 FCD domain RR32_14215 PF01925 RR32_14215 RR32_14220 PF03099 Biotin/lipoate A/B protein ligase family RR32_14225 PF03309 Type III pantothenate kinase RR32_14230 PF00448 SRP54-type protein, GTPase domain RR32_14230 PF02881 SRP54-type protein, helical bundle domain RR32_14230 PF02978 Signal peptide binding domain RR32_14235 PF01578 RR32_14235 RR32_14240 PF01207 Dihydrouridine synthase (Dus) RR32_14270 PF00692 dUTPase RR32_14275 PF01810 RR32_14275 RR32_14280 PF09835 RR32_14280 RR32_14285 PF01048 Phosphorylase superfamily RR32_14290 PF10609 ParA/MinD ATPase like RR32_14300 PF01588 Putative tRNA binding domain RR32_14300 PF08264 Anticodon-binding domain of tRNA RR32_14300 PF09334 tRNA synthetases class I (M) RR32_14315 PF01810 RR32_14315 RR32_14320 PF00440 Bacterial regulatory proteins, tetR family RR32_14325 PF07690 Major Facilitator Superfamily RR32_14330 PF16576 RR32_14330 RR32_14335 PF00291 Pyridoxal-phosphate dependent enzyme RR32_14340 PF03486 HI0933-like protein RR32_14350 PF05552 Conserved TM helix RR32_14365 PF00175 Oxidoreductase NAD-binding domain RR32_14365 PF00970 Oxidoreductase FAD-binding domain RR32_14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_14370 PF03466 LysR substrate binding domain RR32_14375 PF05901 RR32_14375 RR32_14380 PF00313 'Cold-shock' DNA-binding domain RR32_14385 PF14681 Uracil phosphoribosyltransferase RR32_14390 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RR32_14395 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RR32_14400 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RR32_14400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RR32_14405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RR32_14410 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RR32_14415 PF12838 4Fe-4S dicluster domain RR32_14420 PF00146 NADH dehydrogenase RR32_14425 PF00384 Molybdopterin oxidoreductase RR32_14425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RR32_14425 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RR32_14425 PF13510 2Fe-2S iron-sulfur cluster binding domain RR32_14430 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RR32_14430 PF10531 SLBB domain RR32_14430 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RR32_14435 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin RR32_14440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RR32_14440 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RR32_14445 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RR32_14450 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RR32_14455 PF00990 GGDEF domain RR32_14465 PF00512 His Kinase A (phospho-acceptor) domain RR32_14465 PF00672 HAMP domain RR32_14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_14470 PF00072 Response regulator receiver domain RR32_14470 PF00486 Transcriptional regulatory protein, C terminal RR32_14480 PF00317 Ribonucleotide reductase, all-alpha domain RR32_14480 PF02867 Ribonucleotide reductase, barrel domain RR32_14480 PF03477 ATP cone domain RR32_14485 PF00589 Phage integrase family RR32_14490 PF00589 Phage integrase family RR32_14505 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RR32_14550 PF00268 Ribonucleotide reductase, small chain RR32_14555 PF02567 Phenazine biosynthesis-like protein RR32_14560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_14560 PF03466 LysR substrate binding domain RR32_14595 PF00440 Bacterial regulatory proteins, tetR family RR32_14600 PF17074 RR32_14600 RR32_14620 PF08238 Sel1 repeat RR32_14635 PF00440 Bacterial regulatory proteins, tetR family RR32_14640 PF01613 Flavin reductase like domain RR32_14645 PF01717 Cobalamin-independent synthase, Catalytic domain RR32_14650 PF08908 RR32_14650 RR32_14655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_14655 PF03466 LysR substrate binding domain RR32_14660 PF01810 RR32_14660 RR32_14665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_14665 PF03466 LysR substrate binding domain RR32_14670 PF07690 Major Facilitator Superfamily RR32_14675 PF13531 Bacterial extracellular solute-binding protein RR32_14680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_14680 PF03466 LysR substrate binding domain RR32_14685 PF00890 FAD binding domain RR32_14695 PF04982 RR32_14695 RR32_14700 PF00440 Bacterial regulatory proteins, tetR family RR32_14705 PF13468 Glyoxalase-like domain RR32_14710 PF02515 CoA-transferase family III RR32_14715 PF07690 Major Facilitator Superfamily RR32_14720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_14720 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_14720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_14725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_14725 PF03466 LysR substrate binding domain RR32_14730 PF00107 Zinc-binding dehydrogenase RR32_14730 PF08240 Alcohol dehydrogenase GroES-like domain RR32_14735 PF00962 Adenosine/AMP deaminase RR32_14760 PF02445 Quinolinate synthetase A protein RR32_14765 PF01960 ArgJ family RR32_14770 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RR32_14770 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RR32_14775 PF00893 Small Multidrug Resistance protein RR32_14780 PF01545 Cation efflux family RR32_14785 PF05275 RR32_14785 RR32_14790 PF00394 Multicopper oxidase RR32_14790 PF07731 Multicopper oxidase RR32_14790 PF07732 Multicopper oxidase RR32_14800 PF08282 haloacid dehalogenase-like hydrolase RR32_14805 PF00834 Ribulose-phosphate 3 epimerase family RR32_14810 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) RR32_14815 PF00756 Putative esterase RR32_14820 PF01650 Peptidase C13 family RR32_14825 PF04445 Putative SAM-dependent methyltransferase RR32_14830 PF00814 Glycoprotease family RR32_14835 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_14840 PF00293 NUDIX domain RR32_14845 PF00293 NUDIX domain RR32_14845 PF14803 Nudix N-terminal RR32_14860 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) RR32_14870 PF03412 Peptidase C39 family RR32_14880 PF00425 chorismate binding enzyme RR32_14885 PF00155 Aminotransferase class I and II RR32_14890 PF00815 Histidinol dehydrogenase RR32_14895 PF01634 ATP phosphoribosyltransferase RR32_14900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RR32_14905 PF01722 BolA-like protein RR32_14910 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RR32_14915 PF00309 RR32_14915 RR32_14915 PF04552 Sigma-54, DNA binding domain RR32_14915 PF04963 Sigma-54 factor, core binding domain RR32_14945 PF04333 RR32_14945 RR32_14950 PF07228 Stage II sporulation protein E (SpoIIE) RR32_14955 PF01740 STAS domain RR32_14960 PF00795 Carbon-nitrogen hydrolase RR32_14965 PF16309 RR32_14965 RR32_14970 PF01047 MarR family RR32_14975 PF02566 OsmC-like protein RR32_14980 PF00437 Type II/IV secretion system protein RR32_14990 PF00924 Mechanosensitive ion channel RR32_14995 PF10101 RR32_14995 RR32_15000 PF00476 DNA polymerase family A RR32_15000 PF01367 5'-3' exonuclease, C-terminal SAM fold RR32_15000 PF01612 3'-5' exonuclease RR32_15000 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RR32_15005 PF02325 RR32_15005 RR32_15010 PF03807 NADP oxidoreductase coenzyme F420-dependent RR32_15010 PF14748 Pyrroline-5-carboxylate reductase dimerisation RR32_15015 PF01171 PP-loop family RR32_15015 PF09179 TilS substrate binding domain RR32_15015 PF11734 TilS substrate C-terminal domain RR32_15020 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RR32_15025 PF01966 HD domain RR32_15025 PF02541 Ppx/GppA phosphatase family RR32_15030 PF00085 Thioredoxin RR32_15035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RR32_15035 PF07497 Rho termination factor, RNA-binding domain RR32_15035 PF07498 Rho termination factor, N-terminal domain RR32_15045 PF00216 Bacterial DNA-binding protein RR32_15050 PF01588 Putative tRNA binding domain RR32_15050 PF03147 Ferredoxin-fold anticodon binding domain RR32_15050 PF03483 B3/4 domain RR32_15050 PF03484 tRNA synthetase B5 domain RR32_15055 PF01409 tRNA synthetases class II core domain (F) RR32_15055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RR32_15065 PF00583 Acetyltransferase (GNAT) family RR32_15070 PF08719 Domain of unknown function (DUF1768) RR32_15075 PF00453 Ribosomal protein L20 RR32_15080 PF01632 Ribosomal protein L35 RR32_15085 PF05977 Transmembrane secretion effector RR32_15090 PF09335 RR32_15090 RR32_15095 PF00043 Glutathione S-transferase, C-terminal domain RR32_15095 PF02798 Glutathione S-transferase, N-terminal domain RR32_15100 PF00707 Translation initiation factor IF-3, C-terminal domain RR32_15100 PF05198 Translation initiation factor IF-3, N-terminal domain RR32_15105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RR32_15105 PF02824 TGS domain RR32_15105 PF03129 Anticodon binding domain RR32_15105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RR32_15110 PF00501 AMP-binding enzyme RR32_15110 PF13193 AMP-binding enzyme C-terminal domain RR32_15115 PF04751 Protein of unknown function (DUF615) RR32_15120 PF00381 PTS HPr component phosphorylation site RR32_15125 PF03668 RR32_15125 RR32_15130 PF02569 Pantoate-beta-alanine ligase RR32_15135 PF02548 Ketopantoate hydroxymethyltransferase RR32_15140 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RR32_15145 PF01743 Poly A polymerase head domain RR32_15145 PF12626 Polymerase A arginine-rich C-terminus RR32_15145 PF12627 Probable RNA and SrmB- binding site of polymerase A RR32_15150 PF12836 Helix-hairpin-helix motif RR32_15155 PF03819 MazG nucleotide pyrophosphohydrolase domain RR32_15160 PF00106 short chain dehydrogenase RR32_15165 PF02824 TGS domain RR32_15165 PF04607 Region found in RelA / SpoT proteins RR32_15165 PF13291 ACT domain RR32_15165 PF13328 HD domain RR32_15170 PF05958 tRNA (Uracil-5-)-methyltransferase RR32_15175 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RR32_15180 PF00291 Pyridoxal-phosphate dependent enzyme RR32_15185 PF00072 Response regulator receiver domain RR32_15185 PF00512 His Kinase A (phospho-acceptor) domain RR32_15185 PF01627 Hpt domain RR32_15185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_15190 PF00378 Enoyl-CoA hydratase/isomerase family RR32_15195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RR32_15195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RR32_15200 PF01261 Xylose isomerase-like TIM barrel RR32_15205 PF02410 Oligomerisation domain RR32_15210 PF00106 short chain dehydrogenase RR32_15215 PF02233 NAD(P) transhydrogenase beta subunit RR32_15220 PF12769 Domain of unknown function (DUF3814) RR32_15225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RR32_15225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RR32_15230 PF00892 EamA-like transporter family RR32_15235 PF01042 Endoribonuclease L-PSP RR32_15240 PF07690 Major Facilitator Superfamily RR32_15245 PF14350 RR32_15245 RR32_15250 PF06114 Domain of unknown function (DUF955) RR32_15255 PF09907 RR32_15255 RR32_15265 PF04023 FeoA domain RR32_15270 PF02421 Ferrous iron transport protein B RR32_15270 PF07664 RR32_15270 RR32_15270 PF07670 Nucleoside recognition RR32_15275 PF11604 Copper binding periplasmic protein CusF RR32_15280 PF00873 AcrB/AcrD/AcrF family RR32_15285 PF00529 HlyD family secretion protein RR32_15285 PF11604 Copper binding periplasmic protein CusF RR32_15285 PF16576 RR32_15285 RR32_15290 PF02321 Outer membrane efflux protein RR32_15300 PF05275 RR32_15300 RR32_15305 PF00394 Multicopper oxidase RR32_15305 PF07731 Multicopper oxidase RR32_15305 PF07732 Multicopper oxidase RR32_15315 PF00072 Response regulator receiver domain RR32_15315 PF00486 Transcriptional regulatory protein, C terminal RR32_15320 PF00512 His Kinase A (phospho-acceptor) domain RR32_15320 PF00672 HAMP domain RR32_15320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_15325 PF00122 E1-E2 ATPase RR32_15325 PF00702 haloacid dehalogenase-like hydrolase RR32_15325 PF04945 YHS domain RR32_15330 PF04234 CopC domain RR32_15335 PF05425 RR32_15335 RR32_15350 PF11112 RR32_15350 RR32_15355 PF00589 Phage integrase family RR32_15360 PF01207 Dihydrouridine synthase (Dus) RR32_15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_15370 PF03466 LysR substrate binding domain RR32_15375 PF00899 ThiF family RR32_15380 PF00330 Aconitase family (aconitate hydratase) RR32_15380 PF00694 Aconitase C-terminal domain RR32_15385 PF01026 TatD related DNase RR32_15390 PF11738 Protein of unknown function (DUF3298) RR32_15400 PF00009 Elongation factor Tu GTP binding domain RR32_15400 PF16658 RR32_15400 RR32_15410 PF00440 Bacterial regulatory proteins, tetR family RR32_15415 PF00440 Bacterial regulatory proteins, tetR family RR32_15420 PF00563 EAL domain RR32_15420 PF00990 GGDEF domain RR32_15425 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RR32_15425 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain RR32_15430 PF10369 Small subunit of acetolactate synthase RR32_15430 PF13710 ACT domain RR32_15435 PF00205 Thiamine pyrophosphate enzyme, central domain RR32_15435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RR32_15435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RR32_15440 PF13511 RR32_15440 RR32_15445 PF00133 tRNA synthetases class I (I, L, M and V) RR32_15445 PF08264 Anticodon-binding domain of tRNA RR32_15445 PF09334 tRNA synthetases class I (M) RR32_15445 PF13603 Leucyl-tRNA synthetase, Domain 2 RR32_15455 PF06144 DNA polymerase III, delta subunit RR32_15460 PF16576 RR32_15460 RR32_15465 PF00005 ABC transporter RR32_15465 PF02687 RR32_15465 RR32_15465 PF12704 MacB-like periplasmic core domain RR32_15470 PF02321 Outer membrane efflux protein RR32_15475 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_15480 PF12811 RR32_15480 RR32_15485 PF00929 Exonuclease RR32_15490 PF03193 Protein of unknown function, DUF258 RR32_15495 PF00581 Rhodanese-like domain RR32_15500 PF00462 Glutaredoxin RR32_15505 PF02556 Preprotein translocase subunit SecB RR32_15510 PF01648 4'-phosphopantetheinyl transferase superfamily RR32_15515 PF01926 50S ribosome-binding GTPase RR32_15515 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RR32_15520 PF13360 PQQ-like domain RR32_15525 PF09976 Tetratricopeptide repeat RR32_15530 PF03129 Anticodon binding domain RR32_15530 PF13393 Histidyl-tRNA synthetase RR32_15535 PF04551 GcpE protein RR32_15540 PF13413 Helix-turn-helix domain RR32_15540 PF13464 RR32_15540 RR32_15545 PF13432 Tetratricopeptide repeat RR32_15550 PF04055 Radical SAM superfamily RR32_15555 PF00334 Nucleoside diphosphate kinase RR32_15560 PF04384 Iron-sulphur cluster assembly RR32_15565 PF01569 PAP2 superfamily RR32_15575 PF00595 PDZ domain (Also known as DHR or GLGF) RR32_15575 PF03572 Peptidase family S41 RR32_15575 PF11818 RR32_15575 RR32_15580 PF00933 Glycosyl hydrolase family 3 N terminal domain RR32_15585 PF04072 Leucine carboxyl methyltransferase RR32_15590 PF00561 alpha/beta hydrolase fold RR32_15595 PF00171 Aldehyde dehydrogenase family RR32_15600 PF00171 Aldehyde dehydrogenase family RR32_15605 PF01202 Shikimate kinase RR32_15610 PF02447 RR32_15610 RR32_15615 PF01081 KDPG and KHG aldolase RR32_15620 PF00920 Dehydratase family RR32_15625 PF00871 Acetokinase family RR32_15630 PF01515 Phosphate acetyl/butaryl transferase RR32_15630 PF07085 DRTGG domain RR32_15630 PF13500 AAA domain RR32_15635 PF05681 RR32_15635 RR32_15635 PF05683 Fumarase C-terminus RR32_15640 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) RR32_15645 PF11008 RR32_15645 RR32_15650 PF06689 ClpX C4-type zinc finger RR32_15650 PF07724 AAA domain (Cdc48 subfamily) RR32_15650 PF10431 C-terminal, D2-small domain, of ClpB protein RR32_15655 PF00574 Clp protease RR32_15660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RR32_15660 PF05697 Bacterial trigger factor protein (TF) RR32_15660 PF05698 Bacterial trigger factor protein (TF) C-terminus RR32_15665 PF00593 TonB dependent receptor RR32_15665 PF07715 TonB-dependent Receptor Plug Domain RR32_15670 PF13640 2OG-Fe(II) oxygenase superfamily RR32_15675 PF00682 HMGL-like RR32_15675 PF08502 LeuA allosteric (dimerisation) domain RR32_15680 PF00561 alpha/beta hydrolase fold RR32_15685 PF07021 Methionine biosynthesis protein MetW RR32_15690 PF08238 Sel1 repeat RR32_15695 PF01725 Ham1 family RR32_15705 PF02416 mttA/Hcf106 family RR32_15710 PF02416 mttA/Hcf106 family RR32_15715 PF00902 Sec-independent protein translocase protein (TatC) RR32_15720 PF05787 Bacterial protein of unknown function (DUF839) RR32_15725 PF05787 Bacterial protein of unknown function (DUF839) RR32_15730 PF05742 RR32_15730 RR32_15735 PF01790 RR32_15735 RR32_15750 PF00303 Thymidylate synthase RR32_15755 PF00186 Dihydrofolate reductase RR32_15760 PF13387 RR32_15760 RR32_15765 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RR32_15770 PF01625 Peptide methionine sulfoxide reductase RR32_15775 PF02472 Biopolymer transport protein ExbD/TolR RR32_15780 PF01618 RR32_15780 RR32_15785 PF03544 Gram-negative bacterial TonB protein C-terminal RR32_15790 PF00551 Formyl transferase RR32_15790 PF01842 ACT domain RR32_15795 PF00440 Bacterial regulatory proteins, tetR family RR32_15795 PF13972 Bacterial transcriptional repressor RR32_15800 PF00171 Aldehyde dehydrogenase family RR32_15805 PF00830 Ribosomal L28 family RR32_15810 PF00471 Ribosomal protein L33 RR32_15815 PF00999 Sodium/hydrogen exchanger family RR32_15815 PF02254 TrkA-N domain RR32_15835 PF00076 RNA recognition motif RR32_15840 PF00580 UvrD/REP helicase N-terminal domain RR32_15840 PF13361 UvrD-like helicase C-terminal domain RR32_15845 PF03729 RR32_15845 RR32_15855 PF01131 DNA topoisomerase RR32_15855 PF01396 RR32_15855 RR32_15855 PF01751 Toprim domain RR32_15855 PF08272 Topoisomerase I zinc-ribbon-like RR32_15865 PF01638 HxlR-like helix-turn-helix RR32_15870 PF08240 Alcohol dehydrogenase GroES-like domain RR32_15870 PF13602 Zinc-binding dehydrogenase RR32_15875 PF04102 SlyX RR32_15880 PF00005 ABC transporter RR32_15880 PF12848 ABC transporter RR32_15880 PF16326 RR32_15880 RR32_15885 PF01757 RR32_15885 RR32_15890 PF01810 RR32_15890 RR32_15895 PF03279 RR32_15895 RR32_15900 PF00534 Glycosyl transferases group 1 RR32_15900 PF13439 Glycosyltransferase Family 4 RR32_15905 PF00375 Sodium:dicarboxylate symporter family RR32_15910 PF03372 Endonuclease/Exonuclease/phosphatase family RR32_15915 PF01118 Semialdehyde dehydrogenase, NAD binding domain RR32_15915 PF02774 Semialdehyde dehydrogenase, dimerisation domain RR32_15930 PF00710 Asparaginase RR32_15935 PF01416 tRNA pseudouridine synthase RR32_15940 PF12625 RR32_15940 RR32_15940 PF12833 Helix-turn-helix domain RR32_15945 PF01176 Translation initiation factor 1A / IF-1 RR32_15950 PF07007 Protein of unknown function (DUF1311) RR32_15960 PF00180 Isocitrate/isopropylmalate dehydrogenase RR32_15970 PF00694 Aconitase C-terminal domain RR32_15975 PF00330 Aconitase family (aconitate hydratase) RR32_15980 PF09834 RR32_15980 RR32_15985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_15985 PF03466 LysR substrate binding domain RR32_15995 PF10009 RR32_15995 RR32_16000 PF12710 haloacid dehalogenase-like hydrolase RR32_16005 PF00293 NUDIX domain RR32_16010 PF00391 PEP-utilising enzyme, mobile domain RR32_16010 PF02896 PEP-utilising enzyme, TIM barrel domain RR32_16010 PF05524 PEP-utilising enzyme, N-terminal RR32_16010 PF13185 GAF domain RR32_16015 PF00141 Peroxidase RR32_16020 PF12706 Beta-lactamase superfamily domain RR32_16025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_16025 PF03466 LysR substrate binding domain RR32_16030 PF07077 RR32_16030 RR32_16035 PF02798 Glutathione S-transferase, N-terminal domain RR32_16035 PF14497 Glutathione S-transferase, C-terminal domain RR32_16040 PF08279 HTH domain RR32_16040 PF13280 RR32_16040 RR32_16045 PF13419 Haloacid dehalogenase-like hydrolase RR32_16050 PF00849 RNA pseudouridylate synthase RR32_16050 PF01479 S4 domain RR32_16055 PF00575 S1 RNA binding domain RR32_16055 PF10150 Ribonuclease E/G family RR32_16060 PF00501 AMP-binding enzyme RR32_16060 PF13193 AMP-binding enzyme C-terminal domain RR32_16075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_16075 PF03466 LysR substrate binding domain RR32_16080 PF13561 Enoyl-(Acyl carrier protein) reductase RR32_16085 PF04055 Radical SAM superfamily RR32_16085 PF06969 HemN C-terminal domain RR32_16090 PF04657 RR32_16090 RR32_16095 PF01554 MatE RR32_16100 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RR32_16105 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_16105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_16105 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RR32_16110 PF03109 RR32_16110 RR32_16115 PF01197 Ribosomal protein L31 RR32_16120 PF08888 HopJ type III effector protein RR32_16125 PF02537 RR32_16125 RR32_16130 PF04828 Glutathione-dependent formaldehyde-activating enzyme RR32_16135 PF03486 HI0933-like protein RR32_16140 PF02390 Putative methyltransferase RR32_16145 PF03884 Domain of unknown function (DUF329) RR32_16150 PF00753 Metallo-beta-lactamase superfamily RR32_16155 PF00762 Ferrochelatase RR32_16160 PF13271 RR32_16160 RR32_16165 PF01177 Asp/Glu/Hydantoin racemase RR32_16170 PF06938 Protein of unknown function (DUF1285) RR32_16175 PF01946 Thi4 family RR32_16175 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase RR32_16185 PF01206 Sulfurtransferase TusA RR32_16190 PF00571 CBS domain RR32_16190 PF03471 Transporter associated domain RR32_16195 PF00795 Carbon-nitrogen hydrolase RR32_16200 PF01588 Putative tRNA binding domain RR32_16205 PF11391 RR32_16205 RR32_16215 PF07963 Prokaryotic N-terminal methylation motif RR32_16215 PF08334 Type II secretion system (T2SS), protein G RR32_16220 PF00482 Type II secretion system (T2SS), protein F RR32_16225 PF00271 Helicase conserved C-terminal domain RR32_16225 PF04851 Type III restriction enzyme, res subunit RR32_16230 PF00999 Sodium/hydrogen exchanger family RR32_16230 PF02254 TrkA-N domain RR32_16235 PF01430 Hsp33 protein RR32_16240 PF01810 RR32_16240 RR32_16245 PF00226 DnaJ domain RR32_16245 PF01556 DnaJ C terminal domain RR32_16250 PF13591 MerR HTH family regulatory protein RR32_16255 PF01544 CorA-like Mg2+ transporter protein RR32_16260 PF00013 KH domain RR32_16260 PF00575 S1 RNA binding domain RR32_16260 PF01138 3' exoribonuclease family, domain 1 RR32_16260 PF03725 3' exoribonuclease family, domain 2 RR32_16260 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RR32_16265 PF00312 Ribosomal protein S15 RR32_16270 PF00144 Beta-lactamase RR32_16275 PF13538 UvrD-like helicase C-terminal domain RR32_16275 PF13604 AAA domain RR32_16280 PF00580 UvrD/REP helicase N-terminal domain RR32_16280 PF12705 PD-(D/E)XK nuclease superfamily RR32_16280 PF13361 UvrD-like helicase C-terminal domain RR32_16285 PF04257 Exodeoxyribonuclease V, gamma subunit RR32_16295 PF00083 Sugar (and other) transporter RR32_16300 PF03976 Polyphosphate kinase 2 (PPK2) RR32_16310 PF01209 ubiE/COQ5 methyltransferase family RR32_16320 PF03109 RR32_16320 RR32_16325 PF01494 FAD binding domain RR32_16330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RR32_16340 PF01502 Phosphoribosyl-AMP cyclohydrolase RR32_16340 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RR32_16345 PF13245 Part of AAA domain RR32_16345 PF13361 UvrD-like helicase C-terminal domain RR32_16350 PF13476 AAA domain RR32_16355 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RR32_16355 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RR32_16355 PF04039 RR32_16355 RR32_16355 PF13244 RR32_16355 RR32_16360 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RR32_16365 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains RR32_16370 PF01899 RR32_16370 RR32_16375 PF04066 RR32_16375 RR32_16380 PF03334 RR32_16380 RR32_16385 PF02033 Ribosome-binding factor A RR32_16390 PF00009 Elongation factor Tu GTP binding domain RR32_16390 PF04760 Translation initiation factor IF-2, N-terminal region RR32_16390 PF08364 RR32_16390 RR32_16390 PF11987 Translation-initiation factor 2 RR32_16395 PF08529 NusA N-terminal domain RR32_16395 PF13184 NusA-like KH domain RR32_16395 PF14520 Helix-hairpin-helix domain RR32_16400 PF02576 Uncharacterised BCR, YhbC family COG0779 RR32_16400 PF17384 RR32_16400 RR32_16420 PF03840 Preprotein translocase SecG subunit RR32_16425 PF00121 Triosephosphate isomerase RR32_16430 PF00437 Type II/IV secretion system protein RR32_16430 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RR32_16435 PF00482 Type II secretion system (T2SS), protein F RR32_16440 PF01478 Type IV leader peptidase family RR32_16440 PF06750 RR32_16440 RR32_16445 PF01121 Dephospho-CoA kinase RR32_16450 PF00892 EamA-like transporter family RR32_16455 PF00588 SpoU rRNA Methylase family RR32_16455 PF08032 RNA 2'-O ribose methyltransferase substrate binding RR32_16460 PF06865 Protein of unknown function (DUF1255) RR32_16470 PF02463 RecF/RecN/SMC N terminal domain RR32_16475 PF02622 Uncharacterized ACR, COG1678 RR32_16480 PF03652 Uncharacterised protein family (UPF0081) RR32_16485 PF13437 HlyD family secretion protein RR32_16485 PF13533 Biotin-lipoyl like RR32_16490 PF07869 RR32_16490 RR32_16495 PF04632 RR32_16495 RR32_16500 PF01614 Bacterial transcriptional regulator RR32_16505 PF13532 2OG-Fe(II) oxygenase superfamily RR32_16510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RR32_16510 PF12833 Helix-turn-helix domain RR32_16515 PF01066 CDP-alcohol phosphatidyltransferase RR32_16520 PF13622 Thioesterase-like superfamily RR32_16525 PF01541 GIY-YIG catalytic domain RR32_16525 PF02151 UvrB/uvrC motif RR32_16525 PF08459 UvrC Helix-hairpin-helix N-terminal RR32_16535 PF07007 Protein of unknown function (DUF1311) RR32_16540 PF05118 Aspartyl/Asparaginyl beta-hydroxylase RR32_16545 PF00378 Enoyl-CoA hydratase/isomerase family RR32_16545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RR32_16545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RR32_16550 PF00108 Thiolase, N-terminal domain RR32_16550 PF02803 Thiolase, C-terminal domain RR32_16560 PF06821 Serine hydrolase RR32_16565 PF13411 MerR HTH family regulatory protein RR32_16575 PF01323 DSBA-like thioredoxin domain RR32_16590 PF00183 Hsp90 protein RR32_16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_16600 PF03922 OmpW family RR32_16605 PF03553 RR32_16605 RR32_16605 PF13726 RR32_16605 RR32_16610 PF00561 alpha/beta hydrolase fold RR32_16615 PF14539 Domain of unknown function (DUF4442) RR32_16630 PF00623 RNA polymerase Rpb1, domain 2 RR32_16630 PF04983 RNA polymerase Rpb1, domain 3 RR32_16630 PF04997 RNA polymerase Rpb1, domain 1 RR32_16630 PF04998 RNA polymerase Rpb1, domain 5 RR32_16630 PF05000 RNA polymerase Rpb1, domain 4 RR32_16635 PF00562 RNA polymerase Rpb2, domain 6 RR32_16635 PF04560 RNA polymerase Rpb2, domain 7 RR32_16635 PF04561 RNA polymerase Rpb2, domain 2 RR32_16635 PF04563 RNA polymerase beta subunit RR32_16635 PF04565 RNA polymerase Rpb2, domain 3 RR32_16635 PF10385 RNA polymerase beta subunit external 1 domain RR32_16640 PF00542 Ribosomal protein L7/L12 C-terminal domain RR32_16640 PF16320 RR32_16640 RR32_16645 PF00466 Ribosomal protein L10 RR32_16650 PF00687 Ribosomal protein L1p/L10e family RR32_16655 PF00298 Ribosomal protein L11, RNA binding domain RR32_16655 PF03946 Ribosomal protein L11, N-terminal domain RR32_16660 PF02357 Transcription termination factor nusG RR32_16665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RR32_16675 PF00009 Elongation factor Tu GTP binding domain RR32_16675 PF03143 Elongation factor Tu C-terminal domain RR32_16675 PF03144 Elongation factor Tu domain 2 RR32_16700 PF00425 chorismate binding enzyme RR32_16700 PF04715 Anthranilate synthase component I, N terminal region RR32_16705 PF13419 Haloacid dehalogenase-like hydrolase RR32_16710 PF00498 FHA domain RR32_16715 PF00263 RR32_16715 RR32_16715 PF03958 Bacterial type II/III secretion system short domain RR32_16720 PF11356 Type IV pilus biogenesis RR32_16725 PF01203 RR32_16725 RR32_16730 PF00816 H-NS histone family RR32_16735 PF13279 Thioesterase-like superfamily RR32_16750 PF02602 Uroporphyrinogen-III synthase HemD RR32_16755 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RR32_16755 PF03900 Porphobilinogen deaminase, C-terminal domain RR32_16760 PF00072 Response regulator receiver domain RR32_16760 PF04397 LytTr DNA-binding domain RR32_16765 PF06580 RR32_16765 RR32_16770 PF00206 Lyase RR32_16770 PF14698 Argininosuccinate lyase C-terminal RR32_16775 PF04362 Bacterial Fe(2+) trafficking RR32_16780 PF01895 PhoU domain RR32_16785 PF02321 Outer membrane efflux protein RR32_16790 PF00892 EamA-like transporter family RR32_16795 PF00440 Bacterial regulatory proteins, tetR family RR32_16805 PF01964 ThiC family RR32_16805 PF13667 ThiC-associated domain RR32_16810 PF00293 NUDIX domain RR32_16815 PF00149 Calcineurin-like phosphoesterase RR32_16820 PF01258 Prokaryotic dksA/traR C4-type zinc finger RR32_16825 PF00749 tRNA synthetases class I (E and Q), catalytic domain RR32_16830 PF01098 RR32_16830 RR32_16835 PF02875 Mur ligase family, glutamate ligase domain RR32_16835 PF08245 Mur ligase middle domain RR32_16845 PF02421 Ferrous iron transport protein B RR32_16845 PF07664 RR32_16845 RR32_16845 PF07670 Nucleoside recognition RR32_16850 PF04023 FeoA domain RR32_16855 PF00589 Phage integrase family RR32_16855 PF02899 Phage integrase, N-terminal SAM-like domain RR32_16860 PF10411 Disulfide bond isomerase protein N-terminus RR32_16860 PF13098 Thioredoxin-like domain RR32_16865 PF00742 Homoserine dehydrogenase RR32_16865 PF01842 ACT domain RR32_16865 PF03447 Homoserine dehydrogenase, NAD binding domain RR32_16870 PF00291 Pyridoxal-phosphate dependent enzyme RR32_16875 PF00768 D-alanyl-D-alanine carboxypeptidase RR32_16880 PF00072 Response regulator receiver domain RR32_16880 PF00196 Bacterial regulatory proteins, luxR family RR32_16885 PF00512 His Kinase A (phospho-acceptor) domain RR32_16885 PF00989 PAS fold RR32_16885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RR32_16890 PF00072 Response regulator receiver domain RR32_16890 PF00158 Sigma-54 interaction domain RR32_16890 PF02954 Bacterial regulatory protein, Fis family RR32_16895 PF03572 Peptidase family S41 RR32_16900 PF01676 Metalloenzyme superfamily RR32_16900 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RR32_16905 PF03739 RR32_16905 RR32_16910 PF03739 RR32_16910 RR32_16915 PF00883 Cytosol aminopeptidase family, catalytic domain RR32_16915 PF02789 Cytosol aminopeptidase family, N-terminal domain RR32_16920 PF04364 DNA polymerase III chi subunit, HolC RR32_16935 PF00677 Lumazine binding domain RR32_16940 PF02086 D12 class N6 adenine-specific DNA methyltransferase RR32_16945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RR32_16945 PF01872 RibD C-terminal domain RR32_16950 PF03477 ATP cone domain RR32_16955 PF00909 Ammonium Transporter Family RR32_16960 PF00543 Nitrogen regulatory protein P-II RR32_16965 PF04380 RR32_16965 RR32_16970 PF01078 Magnesium chelatase, subunit ChlI RR32_16970 PF13335 RR32_16970 RR32_16970 PF13541 Subunit ChlI of Mg-chelatase RR32_16975 PF00155 Aminotransferase class I and II RR32_16975 PF00392 Bacterial regulatory proteins, gntR family RR32_16980 PF00596 Class II Aldolase and Adducin N-terminal domain RR32_16985 PF00701 Dihydrodipicolinate synthetase family RR32_16990 PF09694 RR32_16990 RR32_16995 PF03573 outer membrane porin, OprD family RR32_17000 PF00719 Inorganic pyrophosphatase RR32_17005 PF01124 MAPEG family RR32_17015 PF00501 AMP-binding enzyme RR32_17015 PF13193 AMP-binding enzyme C-terminal domain RR32_17020 PF00521 DNA gyrase/topoisomerase IV, subunit A RR32_17020 PF03989 DNA gyrase C-terminal domain, beta-propeller RR32_17025 PF00083 Sugar (and other) transporter RR32_17030 PF03458 RR32_17030 RR32_17035 PF02810 SEC-C motif RR32_17040 PF00571 CBS domain RR32_17040 PF03471 Transporter associated domain RR32_17040 PF03741 RR32_17040 RR32_17045 PF03641 Possible lysine decarboxylase RR32_17050 PF07690 Major Facilitator Superfamily RR32_17055 PF01183 Glycosyl hydrolases family 25 RR32_17060 PF00817 impB/mucB/samB family RR32_17060 PF11798 IMS family HHH motif RR32_17060 PF11799 impB/mucB/samB family C-terminal domain RR32_17065 PF01042 Endoribonuclease L-PSP RR32_17070 PF10881 RR32_17070 RR32_17075 PF04055 Radical SAM superfamily RR32_17075 PF08497 RR32_17075 RR32_17075 PF11842 RR32_17075 RR32_17080 PF13449 Esterase-like activity of phytase RR32_17085 PF13411 MerR HTH family regulatory protein RR32_17090 PF11158 RR32_17090 RR32_17095 PF03358 NADPH-dependent FMN reductase RR32_17100 PF11391 RR32_17100 RR32_17105 PF01464 Transglycosylase SLT domain RR32_17110 PF00291 Pyridoxal-phosphate dependent enzyme RR32_17115 PF13527 Acetyltransferase (GNAT) domain RR32_17145 PF00440 Bacterial regulatory proteins, tetR family RR32_17155 PF00872 RR32_17155 RR32_17170 PF00593 TonB dependent receptor RR32_17170 PF07715 TonB-dependent Receptor Plug Domain RR32_17175 PF11162 RR32_17175 RR32_17180 PF01327 Polypeptide deformylase RR32_17185 PF01476 LysM domain RR32_17190 PF02481 DNA recombination-mediator protein A RR32_17195 PF01300 Telomere recombination RR32_17200 PF00892 EamA-like transporter family RR32_17205 PF00440 Bacterial regulatory proteins, tetR family RR32_17210 PF07690 Major Facilitator Superfamily RR32_17215 PF12833 Helix-turn-helix domain RR32_17220 PF00255 Glutathione peroxidase RR32_17230 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RR32_17235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RR32_17235 PF02874 ATP synthase alpha/beta family, beta-barrel domain RR32_17240 PF00231 ATP synthase RR32_17245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RR32_17245 PF00306 ATP synthase alpha/beta chain, C terminal domain RR32_17245 PF02874 ATP synthase alpha/beta family, beta-barrel domain RR32_17250 PF00213 ATP synthase delta (OSCP) subunit RR32_17255 PF00430 ATP synthase B/B' CF(0) RR32_17260 PF00137 ATP synthase subunit C RR32_17265 PF00119 ATP synthase A chain RR32_17270 PF03899 RR32_17270 RR32_17275 PF01297 Periplasmic solute binding protein family RR32_17280 PF01475 Ferric uptake regulator family RR32_17285 PF00005 ABC transporter RR32_17290 PF00950 RR32_17290 RR32_17295 PF01810 RR32_17295 RR32_17300 PF04261 Dyp-type peroxidase family RR32_17310 PF00390 Malic enzyme, N-terminal domain RR32_17310 PF03949 Malic enzyme, NAD binding domain RR32_17315 PF00750 tRNA synthetases class I (R) RR32_17315 PF03485 Arginyl tRNA synthetase N terminal domain RR32_17315 PF05746 DALR anticodon binding domain RR32_17320 PF05036 Sporulation related domain RR32_17325 PF02798 Glutathione S-transferase, N-terminal domain RR32_17325 PF14497 Glutathione S-transferase, C-terminal domain RR32_17330 PF02566 OsmC-like protein RR32_17335 PF02678 Pirin RR32_17335 PF05726 Pirin C-terminal cupin domain RR32_17340 PF12977 Domain of Unknown Function with PDB structure (DUF3861) RR32_17345 PF01475 Ferric uptake regulator family RR32_17350 PF03551 Transcriptional regulator PadR-like family RR32_17355 PF13302 Acetyltransferase (GNAT) domain RR32_17360 PF00117 Glutamine amidotransferase class-I RR32_17360 PF00958 GMP synthase C terminal domain RR32_17360 PF02540 NAD synthase RR32_17365 PF04286 RR32_17365 RR32_17370 PF07681 RR32_17370 RR32_17375 PF09335 RR32_17375 RR32_17380 PF01810 RR32_17380 RR32_17390 PF13614 AAA domain RR32_17395 PF04247 RR32_17395 RR32_17400 PF01722 BolA-like protein RR32_17415 PF01648 4'-phosphopantetheinyl transferase superfamily RR32_17420 PF01370 NAD dependent epimerase/dehydratase family RR32_17420 PF12697 Alpha/beta hydrolase family RR32_17430 PF03176 MMPL family RR32_17430 PF10604 Polyketide cyclase / dehydrase and lipid transport RR32_17430 PF17131 RR32_17430 RR32_17435 PF00501 AMP-binding enzyme RR32_17435 PF00550 Phosphopantetheine attachment site RR32_17435 PF00668 Condensation domain RR32_17435 PF00975 Thioesterase domain RR32_17435 PF13193 AMP-binding enzyme C-terminal domain RR32_17440 PF00550 Phosphopantetheine attachment site RR32_17445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_17445 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_17450 PF00501 AMP-binding enzyme RR32_17455 PF00196 Bacterial regulatory proteins, luxR family RR32_17455 PF03472 Autoinducer binding domain RR32_17470 PF00665 Integrase core domain RR32_17480 PF00765 Autoinducer synthetase RR32_17485 PF07690 Major Facilitator Superfamily RR32_17490 PF16113 RR32_17490 RR32_17495 PF00378 Enoyl-CoA hydratase/isomerase family RR32_17500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RR32_17500 PF02770 Acyl-CoA dehydrogenase, middle domain RR32_17500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RR32_17505 PF00501 AMP-binding enzyme RR32_17505 PF13193 AMP-binding enzyme C-terminal domain RR32_17510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RR32_17510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RR32_17515 PF00171 Aldehyde dehydrogenase family RR32_17520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_17520 PF03466 LysR substrate binding domain RR32_17525 PF00324 Amino acid permease RR32_17530 PF00324 Amino acid permease RR32_17535 PF01042 Endoribonuclease L-PSP RR32_17540 PF00842 Alanine racemase, C-terminal domain RR32_17540 PF01168 Alanine racemase, N-terminal domain RR32_17545 PF01266 FAD dependent oxidoreductase RR32_17550 PF01037 AsnC family RR32_17550 PF13412 Winged helix-turn-helix DNA-binding RR32_17555 PF07786 RR32_17555 RR32_17560 PF00593 TonB dependent receptor RR32_17560 PF07715 TonB-dependent Receptor Plug Domain RR32_17565 PF12680 SnoaL-like domain RR32_17570 PF06877 Regulator of ribonuclease activity B RR32_17575 PF00849 RNA pseudouridylate synthase RR32_17580 PF06210 RR32_17580 RR32_17585 PF11066 RR32_17585 RR32_17590 PF00106 short chain dehydrogenase RR32_17615 PF05954 Phage late control gene D protein (GPD) RR32_17615 PF10106 RR32_17615 RR32_17615 PF13296 RR32_17615 RR32_17625 PF00109 Beta-ketoacyl synthase, N-terminal domain RR32_17625 PF02801 Beta-ketoacyl synthase, C-terminal domain RR32_17640 PF13548 RR32_17640 RR32_17650 PF00330 Aconitase family (aconitate hydratase) RR32_17650 PF00694 Aconitase C-terminal domain RR32_17655 PF00285 Citrate synthase RR32_17660 PF13714 Phosphoenolpyruvate phosphomutase RR32_17665 PF00392 Bacterial regulatory proteins, gntR family RR32_17665 PF07729 FCD domain RR32_17670 PF00155 Aminotransferase class I and II RR32_17675 PF01565 FAD binding domain RR32_17675 PF09330 D-lactate dehydrogenase, membrane binding RR32_17680 PF01070 FMN-dependent dehydrogenase RR32_17685 PF00392 Bacterial regulatory proteins, gntR family RR32_17685 PF07729 FCD domain RR32_17690 PF02652 RR32_17690 RR32_17695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RR32_17695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RR32_17695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RR32_17695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RR32_17700 PF00884 Sulfatase RR32_17705 PF16363 RR32_17705 RR32_17710 PF00342 Phosphoglucose isomerase RR32_17715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RR32_17715 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RR32_17720 PF00483 Nucleotidyl transferase RR32_17725 PF02397 RR32_17725 RR32_17730 PF00535 Glycosyl transferase family 2 RR32_17735 PF00534 Glycosyl transferases group 1 RR32_17740 PF14897 RR32_17740 RR32_17745 PF00535 Glycosyl transferase family 2 RR32_17755 PF01943 RR32_17755 RR32_17760 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RR32_17765 PF00132 Bacterial transferase hexapeptide (six repeats) RR32_17765 PF14602 Hexapeptide repeat of succinyl-transferase RR32_17770 PF00483 Nucleotidyl transferase RR32_17775 PF16363 RR32_17775 RR32_17780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RR32_17780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RR32_17780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RR32_17785 PF02563 Polysaccharide biosynthesis/export protein RR32_17790 PF01451 Low molecular weight phosphotyrosine protein phosphatase RR32_17795 PF02706 Chain length determinant protein RR32_17795 PF13614 AAA domain RR32_17795 PF13807 RR32_17795 RR32_17800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RR32_17800 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RR32_17805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RR32_17805 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RR32_17810 PF03023 RR32_17810 RR32_17815 PF01510 N-acetylmuramoyl-L-alanine amidase RR32_17820 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RR32_17820 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RR32_17830 PF04185 Phosphoesterase family RR32_17830 PF05506 RR32_17830 RR32_17835 PF01138 3' exoribonuclease family, domain 1 RR32_17835 PF03725 3' exoribonuclease family, domain 2 RR32_17840 PF00487 RR32_17840 RR32_17845 PF00175 Oxidoreductase NAD-binding domain RR32_17845 PF00970 Oxidoreductase FAD-binding domain RR32_17850 PF00440 Bacterial regulatory proteins, tetR family RR32_17855 PF00440 Bacterial regulatory proteins, tetR family RR32_17860 PF01323 DSBA-like thioredoxin domain RR32_17865 PF13489 Methyltransferase domain RR32_17870 PF13419 Haloacid dehalogenase-like hydrolase RR32_17875 PF00106 short chain dehydrogenase RR32_17880 PF11776 Domain of unknown function (DUF3315) RR32_17885 PF11776 Domain of unknown function (DUF3315) RR32_17890 PF00583 Acetyltransferase (GNAT) family RR32_17890 PF00696 Amino acid kinase family RR32_17895 PF09084 NMT1/THI5 like RR32_17900 PF13379 NMT1-like family RR32_17905 PF00296 Luciferase-like monooxygenase RR32_17910 PF00528 Binding-protein-dependent transport system inner membrane component RR32_17915 PF00005 ABC transporter RR32_17920 PF00440 Bacterial regulatory proteins, tetR family RR32_17920 PF08362 YcdC-like protein, C-terminal region RR32_17925 PF01048 Phosphorylase superfamily RR32_17930 PF03595 Voltage-dependent anion channel RR32_17935 PF01687 Riboflavin kinase RR32_17935 PF06574 FAD synthetase RR32_17940 PF00133 tRNA synthetases class I (I, L, M and V) RR32_17940 PF06827 Zinc finger found in FPG and IleRS RR32_17940 PF08264 Anticodon-binding domain of tRNA RR32_17945 PF01252 RR32_17945 RR32_17950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RR32_17955 PF03358 NADPH-dependent FMN reductase RR32_17960 PF12796 Ankyrin repeats (3 copies) RR32_17990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RR32_17995 PF07859 alpha/beta hydrolase fold RR32_18015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RR32_18015 PF03466 LysR substrate binding domain RR32_18020 PF01025 GrpE RR32_18025 PF00012 Hsp70 protein RR32_18030 PF00413 Matrixin RR32_18035 PF00413 Matrixin RR32_18045 PF01471 Putative peptidoglycan binding domain RR32_18045 PF13406 Transglycosylase SLT domain RR32_18050 PF02222 ATP-grasp domain RR32_18055 PF00731 AIR carboxylase RR32_18060 PF04342 RR32_18060 RR32_18065 PF01225 Mur ligase family, catalytic domain RR32_18065 PF02875 Mur ligase family, glutamate ligase domain RR32_18065 PF08245 Mur ligase middle domain RR32_18070 PF06772 RR32_18070 RR32_18075 PF01569 PAP2 superfamily RR32_18080 PF03741 RR32_18080 RR32_18090 PF03738 Glutathionylspermidine synthase preATP-grasp RR32_18095 PF00355 Rieske [2Fe-2S] domain RR32_18100 PF01979 Amidohydrolase family RR32_18110 PF00156 Phosphoribosyl transferase domain RR32_18115 PF04226 RR32_18115 RR32_18120 PF10411 Disulfide bond isomerase protein N-terminus RR32_18120 PF13098 Thioredoxin-like domain RR32_18125 PF01545 Cation efflux family RR32_18135 PF01926 50S ribosome-binding GTPase RR32_18135 PF10396 GTP-binding protein TrmE N-terminus RR32_18135 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE RR32_18140 PF02096 60Kd inner membrane protein RR32_18140 PF14849 YidC periplasmic domain RR32_18145 PF01809 RR32_18145 RR32_18150 PF00825 Ribonuclease P RR32_18155 PF00468 Ribosomal protein L34 RR32_18165 PF13086 AAA domain RR32_18170 PF01527 Transposase RR32_18190 PF00665 Integrase core domain RR32_18195 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system RR32_18200 PF13683 RR32_18200 RR32_18210 PF05973 RR32_18210 RR32_18215 PF13744 Helix-turn-helix domain RR32_18235 PF13744 Helix-turn-helix domain RR32_18240 PF05973 RR32_18240 RR32_18245 PF05016 Plasmid stabilisation system protein RR32_18250 PF04221 RelB antitoxin RR32_18260 PF09346 SMI1 / KNR4 family (SUKH-1) RR32_18265 PF08238 Sel1 repeat RR32_18275 PF00892 EamA-like transporter family RR32_18280 PF07690 Major Facilitator Superfamily RR32_18285 PF00557 Metallopeptidase family M24 RR32_18285 PF01321 Creatinase/Prolidase N-terminal domain RR32_18290 PF01965 DJ-1/PfpI family RR32_18290 PF12833 Helix-turn-helix domain RR32_18295 PF02583 Metal-sensitive transcriptional repressor RR32_18300 PF00107 Zinc-binding dehydrogenase RR32_18300 PF08240 Alcohol dehydrogenase GroES-like domain RR32_18305 PF00756 Putative esterase RR32_18315 PF00465 Iron-containing alcohol dehydrogenase RR32_18320 PF01965 DJ-1/PfpI family RR32_18325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RR32_18335 PF00440 Bacterial regulatory proteins, tetR family RR32_18335 PF16925 RR32_18335 RR32_18340 PF00107 Zinc-binding dehydrogenase RR32_18340 PF16884 RR32_18340 RR32_18345 PF00043 Glutathione S-transferase, C-terminal domain RR32_18345 PF02798 Glutathione S-transferase, N-terminal domain RR32_18355 PF00589 Phage integrase family RR32_18355 PF13356 Domain of unknown function (DUF4102) RR32_18365 PF13443 Cro/C1-type HTH DNA-binding domain RR32_18370 PF13737 RR32_18370 RR32_18375 PF00107 Zinc-binding dehydrogenase RR32_18380 PF00872 RR32_18380 RR32_18400 PF01051 Initiator Replication protein RR32_18405 PF13614 AAA domain RR32_18410 PF02195 ParB-like nuclease domain RR32_18415 PF00245 Alkaline phosphatase RR32_18425 PF01381 Helix-turn-helix RR32_18430 PF02661 Fic/DOC family RR32_18455 PF00665 Integrase core domain RR32_18495 PF01381 Helix-turn-helix RR32_18500 PF05973 RR32_18500 RR32_18510 PF02498 RR32_18510 RR32_18525 PF13737 RR32_18525 RR32_18535 PF02661 Fic/DOC family RR32_18545 PF13280 RR32_18545 RR32_18550 PF08849 Putative inner membrane protein (DUF1819) RR32_18555 PF08747 Domain of unknown function (DUF1788) RR32_18565 PF07669 Eco57I restriction-modification methylase RR32_18575 PF08665 RR32_18575 RR32_18580 PF05362 Lon protease (S16) C-terminal proteolytic domain RR32_18580 PF13337 RR32_18580 RR32_18590 PF00166 Chaperonin 10 Kd subunit RR32_18600 PF11412 Disulphide bond corrector protein DsbC RR32_18605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RR32_18615 PF00753 Metallo-beta-lactamase superfamily RR32_18620 PF00665 Integrase core domain RR32_18620 PF13936 Helix-turn-helix domain RR32_18645 PF03713 Domain of unknown function (DUF305) RR32_18650 PF00111 2Fe-2S iron-sulfur cluster binding domain RR32_18660 PF00403 Heavy-metal-associated domain RR32_18665 PF01609 Transposase DDE domain RR32_18665 PF13340 RR32_18665 RR32_18670 PF00376 MerR family regulatory protein RR32_18670 PF09278 MerR, DNA binding RR32_18675 PF00122 E1-E2 ATPase RR32_18675 PF00403 Heavy-metal-associated domain RR32_18675 PF00702 haloacid dehalogenase-like hydrolase RR32_18680 PF01022 Bacterial regulatory protein, arsR family RR32_18690 PF01545 Cation efflux family RR32_18695 PF16576 RR32_18695 RR32_18700 PF00873 AcrB/AcrD/AcrF family RR32_18705 PF02321 Outer membrane efflux protein RR32_18730 PF00239 Resolvase, N terminal domain RR32_18735 PF08357 SEFIR domain RR32_18770 PF02534 Type IV secretory system Conjugative DNA transfer RR32_18775 PF00437 Type II/IV secretion system protein RR32_18780 PF03743 Bacterial conjugation TrbI-like protein RR32_18785 PF03524 Conjugal transfer protein RR32_18795 PF07996 Type IV secretion system proteins RR32_18800 PF04610 RR32_18800 RR32_18810 PF03135 RR32_18810 RR32_18815 PF05101 RR32_18815 RR32_18820 PF04956 RR32_18820 RR32_18825 PF01464 Transglycosylase SLT domain RR32_18830 PF01131 DNA topoisomerase RR32_18830 PF01396 RR32_18830 RR32_18830 PF01751 Toprim domain RR32_18860 PF01051 Initiator Replication protein RR32_18880 PF13614 AAA domain RR32_18885 PF02195 ParB-like nuclease domain RR32_18885 PF06613 KorB C-terminal beta-barrel domain RR32_18885 PF08535 KorB domain RR32_18890 PF05713 RR32_18890 RR32_18905 PF02643 Uncharacterized ACR, COG1430 RR32_18910 PF00817 impB/mucB/samB family RR32_18910 PF11799 impB/mucB/samB family C-terminal domain RR32_18910 PF13438 RR32_18910 RR32_18915 PF00717 Peptidase S24-like RR32_18920 PF00440 Bacterial regulatory proteins, tetR family RR32_18925 PF00893 Small Multidrug Resistance protein RR32_18935 PF01051 Initiator Replication protein RR32_18960 PF01381 Helix-turn-helix RR32_18975 PF06296 RR32_18975 RR32_18980 PF01381 Helix-turn-helix RR32_18985 PF00069 Protein kinase domain RR32_18990 PF14384 RR32_18990 RR32_18995 PF04365 Protein of unknown function (DUF497) RR32_19075 PF12083 RR32_19075 RR32_19095 PF06412 RR32_19095 RR32_19100 PF01443 Viral (Superfamily 1) RNA helicase RR32_19100 PF03389 MobA/MobL family RR32_19100 PF13604 AAA domain RR32_19105 PF06666 RR32_19105 RR32_19120 PF01636 Phosphotransferase enzyme family RR32_19125 PF00665 Integrase core domain RR32_19125 PF13936 Helix-turn-helix domain RR32_19130 PF00118 TCP-1/cpn60 chaperonin family RR32_19135 PF00239 Resolvase, N terminal domain RR32_19155 PF00565 Staphylococcal nuclease homologue RR32_19165 PF07996 Type IV secretion system proteins RR32_19170 PF03135 RR32_19170 RR32_19175 PF04956 RR32_19175 RR32_19180 PF01464 Transglycosylase SLT domain RR32_19190 PF10412 Type IV secretion-system coupling protein DNA-binding domain RR32_19195 PF01464 Transglycosylase SLT domain RR32_19195 PF07996 Type IV secretion system proteins RR32_19210 PF00437 Type II/IV secretion system protein RR32_19215 PF03743 Bacterial conjugation TrbI-like protein RR32_19220 PF03524 Conjugal transfer protein RR32_19225 PF04335 VirB8 protein RR32_19230 PF04610 RR32_19230 RR32_19255 PF13614 AAA domain