locus-tag class description GD578_00040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GD578_00045 PF01252 Signal peptidase (SPase) II GD578_00050 PF06827 Zinc finger found in FPG and IleRS GD578_00050 PF00133 tRNA synthetases class I (I, L, M and V) GD578_00050 PF08264 Anticodon-binding domain of tRNA GD578_00055 PF06574 FAD synthetase GD578_00055 PF01687 Riboflavin kinase GD578_00065 PF01048 Phosphorylase superfamily GD578_00070 PF08362 YcdC-like protein, C-terminal region GD578_00070 PF00440 Bacterial regulatory proteins, tetR family GD578_00075 PF00005 ABC transporter GD578_00080 PF00528 Binding-protein-dependent transport system inner membrane component GD578_00085 PF00296 Luciferase-like monooxygenase GD578_00090 PF09084 NMT1/THI5 like GD578_00095 PF09084 NMT1/THI5 like GD578_00100 PF00696 Amino acid kinase family GD578_00100 PF00583 Acetyltransferase (GNAT) family GD578_00115 PF00106 short chain dehydrogenase GD578_00120 PF13419 Haloacid dehalogenase-like hydrolase GD578_00130 PF01323 DSBA-like thioredoxin domain GD578_00135 PF08360 QacR-like protein, C-terminal region GD578_00135 PF00440 Bacterial regulatory proteins, tetR family GD578_00140 PF00440 Bacterial regulatory proteins, tetR family GD578_00145 PF00175 Oxidoreductase NAD-binding domain GD578_00150 PF00487 Fatty acid desaturase GD578_00155 PF01138 3' exoribonuclease family, domain 1 GD578_00155 PF03725 3' exoribonuclease family, domain 2 GD578_00160 PF04185 Phosphoesterase family GD578_00160 PF05506 Domain of unknown function (DUF756) GD578_00170 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GD578_00170 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GD578_00175 PF01510 N-acetylmuramoyl-L-alanine amidase GD578_00180 PF03023 Lipid II flippase MurJ GD578_00185 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GD578_00185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GD578_00190 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GD578_00190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GD578_00195 PF13807 G-rich domain on putative tyrosine kinase GD578_00195 PF02706 Chain length determinant protein GD578_00195 PF13614 AAA domain GD578_00200 PF01451 Low molecular weight phosphotyrosine protein phosphatase GD578_00205 PF10531 SLBB domain GD578_00205 PF02563 Polysaccharide biosynthesis/export protein GD578_00205 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GD578_00210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GD578_00210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GD578_00210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GD578_00220 PF00535 Glycosyl transferase family 2 GD578_00220 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GD578_00230 PF13439 Glycosyltransferase Family 4 GD578_00230 PF00534 Glycosyl transferases group 1 GD578_00235 PF00534 Glycosyl transferases group 1 GD578_00235 PF13477 Glycosyl transferase 4-like GD578_00240 PF02397 Bacterial sugar transferase GD578_00245 PF00483 Nucleotidyl transferase GD578_00250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GD578_00250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GD578_00250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GD578_00255 PF00342 Phosphoglucose isomerase GD578_00260 PF16363 GDP-mannose 4,6 dehydratase GD578_00270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GD578_00270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GD578_00270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GD578_00270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GD578_00275 PF02652 L-lactate permease GD578_00280 PF07729 FCD domain GD578_00280 PF00392 Bacterial regulatory proteins, gntR family GD578_00285 PF01070 FMN-dependent dehydrogenase GD578_00290 PF01565 FAD binding domain GD578_00290 PF09330 D-lactate dehydrogenase, membrane binding GD578_00295 PF00155 Aminotransferase class I and II GD578_00305 PF00392 Bacterial regulatory proteins, gntR family GD578_00305 PF07729 FCD domain GD578_00315 PF00285 Citrate synthase, C-terminal domain GD578_00320 PF00694 Aconitase C-terminal domain GD578_00320 PF00330 Aconitase family (aconitate hydratase) GD578_00360 PF02801 Beta-ketoacyl synthase, C-terminal domain GD578_00360 PF00109 Beta-ketoacyl synthase, N-terminal domain GD578_00430 PF00849 RNA pseudouridylate synthase GD578_00445 PF00593 TonB dependent receptor GD578_00445 PF07715 TonB-dependent Receptor Plug Domain GD578_00455 PF01037 Lrp/AsnC ligand binding domain GD578_00460 PF01266 FAD dependent oxidoreductase GD578_00465 PF00842 Alanine racemase, C-terminal domain GD578_00465 PF01168 Alanine racemase, N-terminal domain GD578_00470 PF01042 Endoribonuclease L-PSP GD578_00475 PF00324 Amino acid permease GD578_00480 PF00324 Amino acid permease GD578_00490 PF00171 Aldehyde dehydrogenase family GD578_00495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GD578_00495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GD578_00500 PF13193 AMP-binding enzyme C-terminal domain GD578_00500 PF00501 AMP-binding enzyme GD578_00505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_00505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_00505 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_00510 PF00378 Enoyl-CoA hydratase/isomerase GD578_00515 PF00378 Enoyl-CoA hydratase/isomerase GD578_00520 PF00083 Sugar (and other) transporter GD578_00520 PF07690 Major Facilitator Superfamily GD578_00525 PF00765 Autoinducer synthase GD578_00535 PF03472 Autoinducer binding domain GD578_00535 PF00196 Bacterial regulatory proteins, luxR family GD578_00540 PF00501 AMP-binding enzyme GD578_00545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_00545 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_00545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_00550 PF14765 Polyketide synthase dehydratase GD578_00550 PF00550 Phosphopantetheine attachment site GD578_00550 PF08659 KR domain GD578_00550 PF02801 Beta-ketoacyl synthase, C-terminal domain GD578_00550 PF16197 Ketoacyl-synthetase C-terminal extension GD578_00550 PF00109 Beta-ketoacyl synthase, N-terminal domain GD578_00550 PF00698 Acyl transferase domain GD578_00555 PF13193 AMP-binding enzyme C-terminal domain GD578_00555 PF00501 AMP-binding enzyme GD578_00555 PF00975 Thioesterase domain GD578_00555 PF00550 Phosphopantetheine attachment site GD578_00555 PF00668 Condensation domain GD578_00570 PF16363 GDP-mannose 4,6 dehydratase GD578_00575 PF01648 4'-phosphopantetheinyl transferase superfamily GD578_00590 PF01722 BolA-like protein GD578_00600 PF13614 AAA domain GD578_00615 PF09335 SNARE associated Golgi protein GD578_00625 PF04286 Protein of unknown function (DUF445) GD578_00625 PF04286 Protein of unknown function (DUF445) GD578_00630 PF00117 Glutamine amidotransferase class-I GD578_00630 PF00958 GMP synthase C terminal domain GD578_00630 PF02540 NAD synthase GD578_00635 PF13302 Acetyltransferase (GNAT) domain GD578_00640 PF03551 Transcriptional regulator PadR-like family GD578_00645 PF01475 Ferric uptake regulator family GD578_00655 PF02678 Pirin GD578_00655 PF05726 Pirin C-terminal cupin domain GD578_00675 PF03485 Arginyl tRNA synthetase N terminal domain GD578_00675 PF00750 tRNA synthetases class I (R) GD578_00675 PF05746 DALR anticodon binding domain GD578_00680 PF00390 Malic enzyme, N-terminal domain GD578_00680 PF03949 Malic enzyme, NAD binding domain GD578_00690 PF04261 Dyp-type peroxidase family GD578_00695 PF01810 LysE type translocator GD578_00700 PF00950 ABC 3 transport family GD578_00705 PF00005 ABC transporter GD578_00725 PF00119 ATP synthase A chain GD578_00730 PF00137 ATP synthase subunit C GD578_00735 PF00430 ATP synthase B/B' CF(0) GD578_00740 PF00213 ATP synthase delta (OSCP) subunit GD578_00745 PF00306 ATP synthase alpha/beta chain, C terminal domain GD578_00745 PF02874 ATP synthase alpha/beta family, beta-barrel domain GD578_00745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GD578_00750 PF00231 ATP synthase GD578_00755 PF02874 ATP synthase alpha/beta family, beta-barrel domain GD578_00755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GD578_00760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GD578_00770 PF00255 Glutathione peroxidase GD578_00780 PF07690 Major Facilitator Superfamily GD578_00785 PF00440 Bacterial regulatory proteins, tetR family GD578_00790 PF00892 EamA-like transporter family GD578_00795 PF01300 Telomere recombination GD578_00800 PF17782 DprA winged helix domain GD578_00800 PF02481 DNA recombination-mediator protein A GD578_00810 PF01327 Polypeptide deformylase GD578_00835 PF00440 Bacterial regulatory proteins, tetR family GD578_00870 PF00291 Pyridoxal-phosphate dependent enzyme GD578_00885 PF03358 NADPH-dependent FMN reductase GD578_00905 PF04055 Radical SAM superfamily GD578_00905 PF11842 Domain of unknown function (DUF3362) GD578_00905 PF08497 Radical SAM N-terminal GD578_00920 PF00817 impB/mucB/samB family GD578_00920 PF11799 impB/mucB/samB family C-terminal domain GD578_00920 PF11798 IMS family HHH motif GD578_00930 PF07690 Major Facilitator Superfamily GD578_00935 PF03641 Possible lysine decarboxylase GD578_00940 PF03741 Integral membrane protein TerC family GD578_00940 PF03471 Transporter associated domain GD578_00945 PF02810 SEC-C motif GD578_00950 PF03458 UPF0126 domain GD578_00955 PF07690 Major Facilitator Superfamily GD578_00960 PF00521 DNA gyrase/topoisomerase IV, subunit A GD578_00960 PF03989 DNA gyrase C-terminal domain, beta-propeller GD578_00965 PF13193 AMP-binding enzyme C-terminal domain GD578_00965 PF00501 AMP-binding enzyme GD578_00980 PF00719 Inorganic pyrophosphatase GD578_00985 PF03573 outer membrane porin, OprD family GD578_00995 PF00701 Dihydrodipicolinate synthetase family GD578_01000 PF00596 Class II Aldolase and Adducin N-terminal domain GD578_01005 PF00392 Bacterial regulatory proteins, gntR family GD578_01005 PF00155 Aminotransferase class I and II GD578_01010 PF01078 Magnesium chelatase, subunit ChlI GD578_01010 PF13335 Magnesium chelatase, subunit ChlI C-terminal GD578_01020 PF00665 Integrase core domain GD578_01050 PF00582 Universal stress protein family GD578_01055 PF00916 Sulfate permease family GD578_01055 PF01740 STAS domain GD578_01065 PF01078 Magnesium chelatase, subunit ChlI GD578_01065 PF13335 Magnesium chelatase, subunit ChlI C-terminal GD578_01075 PF00543 Nitrogen regulatory protein P-II GD578_01080 PF00909 Ammonium Transporter Family GD578_01085 PF03477 ATP cone domain GD578_01090 PF01872 RibD C-terminal domain GD578_01090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GD578_01100 PF00677 Lumazine binding domain GD578_01120 PF02789 Cytosol aminopeptidase family, N-terminal domain GD578_01120 PF00883 Cytosol aminopeptidase family, catalytic domain GD578_01130 PF03739 Lipopolysaccharide export system permease LptF/LptG GD578_01135 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GD578_01135 PF01676 Metalloenzyme superfamily GD578_01140 PF03572 Peptidase family S41 GD578_01140 PF00595 PDZ domain GD578_01145 PF00158 Sigma-54 interaction domain GD578_01145 PF00072 Response regulator receiver domain GD578_01145 PF02954 Bacterial regulatory protein, Fis family GD578_01150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_01150 PF00512 His Kinase A (phospho-acceptor) domain GD578_01155 PF00196 Bacterial regulatory proteins, luxR family GD578_01155 PF00072 Response regulator receiver domain GD578_01160 PF00768 D-alanyl-D-alanine carboxypeptidase GD578_01165 PF00291 Pyridoxal-phosphate dependent enzyme GD578_01170 PF01842 ACT domain GD578_01170 PF00742 Homoserine dehydrogenase GD578_01170 PF03447 Homoserine dehydrogenase, NAD binding domain GD578_01175 PF13098 Thioredoxin-like domain GD578_01175 PF10411 Disulfide bond isomerase protein N-terminus GD578_01180 PF02899 Phage integrase, N-terminal SAM-like domain GD578_01180 PF00589 Phage integrase family GD578_01190 PF07664 Ferrous iron transport protein B C terminus GD578_01190 PF07670 Nucleoside recognition GD578_01190 PF02421 Ferrous iron transport protein B GD578_01200 PF02875 Mur ligase family, glutamate ligase domain GD578_01200 PF08245 Mur ligase middle domain GD578_01205 PF01098 Cell cycle protein GD578_01210 PF00749 tRNA synthetases class I (E and Q), catalytic domain GD578_01215 PF01258 Prokaryotic dksA/traR C4-type zinc finger GD578_01220 PF00149 Calcineurin-like phosphoesterase GD578_01225 PF00293 NUDIX domain GD578_01230 PF01964 Radical SAM ThiC family GD578_01230 PF13667 ThiC-associated domain GD578_01245 PF00892 EamA-like transporter family GD578_01250 PF02321 Outer membrane efflux protein GD578_01255 PF01895 PhoU domain GD578_01260 PF04362 Bacterial Fe(2+) trafficking GD578_01265 PF14698 Argininosuccinate lyase C-terminal GD578_01265 PF00206 Lyase GD578_01270 PF07694 5TMR of 5TMR-LYT GD578_01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_01270 PF06580 Histidine kinase GD578_01275 PF00072 Response regulator receiver domain GD578_01275 PF04397 LytTr DNA-binding domain GD578_01280 PF03900 Porphobilinogen deaminase, C-terminal domain GD578_01280 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GD578_01305 PF00816 H-NS histone family GD578_01320 PF00263 Bacterial type II and III secretion system protein GD578_01320 PF03958 Bacterial type II/III secretion system short domain GD578_01325 PF12401 Protein of unknown function (DUF2662) GD578_01325 PF00498 FHA domain GD578_01330 PF13419 Haloacid dehalogenase-like hydrolase GD578_01335 PF00425 chorismate binding enzyme GD578_01335 PF04715 Anthranilate synthase component I, N terminal region GD578_01360 PF03144 Elongation factor Tu domain 2 GD578_01360 PF03143 Elongation factor Tu C-terminal domain GD578_01360 PF00009 Elongation factor Tu GTP binding domain GD578_01370 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GD578_01375 PF00467 KOW motif GD578_01375 PF02357 Transcription termination factor nusG GD578_01380 PF03946 Ribosomal protein L11, N-terminal domain GD578_01380 PF00298 Ribosomal protein L11, RNA binding domain GD578_01385 PF00687 Ribosomal protein L1p/L10e family GD578_01390 PF00466 Ribosomal protein L10 GD578_01395 PF00542 Ribosomal protein L7/L12 C-terminal domain GD578_01395 PF16320 Ribosomal protein L7/L12 dimerisation domain GD578_01400 PF04560 RNA polymerase Rpb2, domain 7 GD578_01400 PF00562 RNA polymerase Rpb2, domain 6 GD578_01400 PF10385 RNA polymerase beta subunit external 1 domain GD578_01400 PF04565 RNA polymerase Rpb2, domain 3 GD578_01400 PF04561 RNA polymerase Rpb2, domain 2 GD578_01400 PF04563 RNA polymerase beta subunit GD578_01405 PF05000 RNA polymerase Rpb1, domain 4 GD578_01405 PF04998 RNA polymerase Rpb1, domain 5 GD578_01405 PF04983 RNA polymerase Rpb1, domain 3 GD578_01405 PF00623 RNA polymerase Rpb1, domain 2 GD578_01405 PF04997 RNA polymerase Rpb1, domain 1 GD578_01430 PF00561 alpha/beta hydrolase fold GD578_01435 PF13726 Na+-H+ antiporter family GD578_01435 PF03553 Na+/H+ antiporter family GD578_01455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_01455 PF00183 Hsp90 protein GD578_01470 PF01323 DSBA-like thioredoxin domain GD578_01480 PF09278 MerR, DNA binding GD578_01480 PF00376 MerR family regulatory protein GD578_01485 PF06821 Serine hydrolase GD578_01495 PF00108 Thiolase, N-terminal domain GD578_01495 PF02803 Thiolase, C-terminal domain GD578_01500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GD578_01500 PF00378 Enoyl-CoA hydratase/isomerase GD578_01500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GD578_01525 PF08459 UvrC Helix-hairpin-helix N-terminal GD578_01525 PF02151 UvrB/uvrC motif GD578_01525 PF01541 GIY-YIG catalytic domain GD578_01535 PF01066 CDP-alcohol phosphatidyltransferase GD578_01540 PF02805 Metal binding domain of Ada GD578_01540 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GD578_01540 PF12833 Helix-turn-helix domain GD578_01540 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GD578_01555 PF04632 Fusaric acid resistance protein family GD578_01565 PF13533 Biotin-lipoyl like GD578_01570 PF03652 Holliday junction resolvase GD578_01575 PF02622 Uncharacterized ACR, COG1678 GD578_01580 PF02463 RecF/RecN/SMC N terminal domain GD578_01590 PF06865 Pyrimidine/purine nucleoside phosphorylase GD578_01595 PF08032 RNA 2'-O ribose methyltransferase substrate binding GD578_01595 PF00588 SpoU rRNA Methylase family GD578_01605 PF01121 Dephospho-CoA kinase GD578_01610 PF06750 Bacterial Peptidase A24 N-terminal domain GD578_01610 PF01478 Type IV leader peptidase family GD578_01615 PF00482 Type II secretion system (T2SS), protein F GD578_01620 PF00437 Type II/IV secretion system protein GD578_01620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GD578_01625 PF00121 Triosephosphate isomerase GD578_01630 PF03840 Preprotein translocase SecG subunit GD578_01650 PF02576 RimP N-terminal domain GD578_01650 PF17384 RimP C-terminal SH3 domain GD578_01655 PF13184 NusA-like KH domain GD578_01655 PF08529 NusA N-terminal domain GD578_01655 PF00575 S1 RNA binding domain GD578_01660 PF11987 Translation-initiation factor 2 GD578_01660 PF08364 Bacterial translation initiation factor IF-2 associated region GD578_01660 PF00009 Elongation factor Tu GTP binding domain GD578_01660 PF04760 Translation initiation factor IF-2, N-terminal region GD578_01665 PF02033 Ribosome-binding factor A GD578_01675 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GD578_01685 PF00361 Proton-conducting membrane transporter GD578_01690 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GD578_01695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GD578_01695 PF00361 Proton-conducting membrane transporter GD578_01695 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GD578_01695 PF13244 Domain of unknown function (DUF4040) GD578_01710 PF01502 Phosphoribosyl-AMP cyclohydrolase GD578_01715 PF01494 FAD binding domain GD578_01720 PF03109 ABC1 family GD578_01730 PF01209 ubiE/COQ5 methyltransferase family GD578_01740 PF03976 Polyphosphate kinase 2 (PPK2) GD578_01745 PF07690 Major Facilitator Superfamily GD578_01755 PF17946 RecC C-terminal domain GD578_01760 PF13361 UvrD-like helicase C-terminal domain GD578_01760 PF12705 PD-(D/E)XK nuclease superfamily GD578_01760 PF00580 UvrD/REP helicase N-terminal domain GD578_01765 PF13538 UvrD-like helicase C-terminal domain GD578_01775 PF00312 Ribosomal protein S15 GD578_01780 PF00013 KH domain GD578_01780 PF01138 3' exoribonuclease family, domain 1 GD578_01780 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GD578_01780 PF03725 3' exoribonuclease family, domain 2 GD578_01780 PF00575 S1 RNA binding domain GD578_01785 PF01544 CorA-like Mg2+ transporter protein GD578_01795 PF01556 DnaJ C terminal domain GD578_01795 PF00226 DnaJ domain GD578_01805 PF01430 Hsp33 protein GD578_01810 PF00999 Sodium/hydrogen exchanger family GD578_01810 PF02254 TrkA-N domain GD578_01815 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GD578_01815 PF17764 3′ DNA-binding domain (3′BD) GD578_01815 PF00271 Helicase conserved C-terminal domain GD578_01815 PF00270 DEAD/DEAH box helicase GD578_01815 PF18074 Primosomal protein N C-terminal domain GD578_01820 PF00482 Type II secretion system (T2SS), protein F GD578_01825 PF08334 Type II secretion system (T2SS), protein G GD578_01825 PF07963 Prokaryotic N-terminal methylation motif GD578_01840 PF01588 Putative tRNA binding domain GD578_01845 PF00795 Carbon-nitrogen hydrolase GD578_01850 PF03471 Transporter associated domain GD578_01850 PF00571 CBS domain GD578_01855 PF01206 Sulfurtransferase TusA GD578_01875 PF01177 Asp/Glu/Hydantoin racemase GD578_01885 PF00762 Ferrochelatase GD578_01890 PF00753 Metallo-beta-lactamase superfamily GD578_01895 PF03884 DNA gyrase inhibitor YacG GD578_01915 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GD578_01930 PF01197 Ribosomal protein L31 GD578_01935 PF03109 ABC1 family GD578_01940 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GD578_01940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_01945 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_01945 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GD578_01945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_01950 PF01554 MatE GD578_01960 PF06969 HemN C-terminal domain GD578_01960 PF04055 Radical SAM superfamily GD578_01970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_01970 PF03466 LysR substrate binding domain GD578_01985 PF00501 AMP-binding enzyme GD578_01985 PF13193 AMP-binding enzyme C-terminal domain GD578_01990 PF10150 Ribonuclease E/G family GD578_01990 PF12111 Polyribonucleotide phosphorylase C terminal GD578_01990 PF00575 S1 RNA binding domain GD578_02000 PF01479 S4 domain GD578_02000 PF00849 RNA pseudouridylate synthase GD578_02010 PF13280 WYL domain GD578_02010 PF08279 HTH domain GD578_02015 PF02798 Glutathione S-transferase, N-terminal domain GD578_02025 PF03466 LysR substrate binding domain GD578_02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_02030 PF12706 Beta-lactamase superfamily domain GD578_02035 PF00141 Peroxidase GD578_02040 PF00391 PEP-utilising enzyme, mobile domain GD578_02040 PF02896 PEP-utilising enzyme, TIM barrel domain GD578_02040 PF01590 GAF domain GD578_02040 PF05524 PEP-utilising enzyme, N-terminal GD578_02045 PF00293 NUDIX domain GD578_02070 PF03466 LysR substrate binding domain GD578_02070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_02080 PF00330 Aconitase family (aconitate hydratase) GD578_02085 PF00694 Aconitase C-terminal domain GD578_02095 PF00180 Isocitrate/isopropylmalate dehydrogenase GD578_02110 PF01176 Translation initiation factor 1A / IF-1 GD578_02120 PF01416 tRNA pseudouridine synthase GD578_02140 PF01118 Semialdehyde dehydrogenase, NAD binding domain GD578_02140 PF02774 Semialdehyde dehydrogenase, dimerisation domain GD578_02150 PF00375 Sodium:dicarboxylate symporter family GD578_02160 PF03279 Bacterial lipid A biosynthesis acyltransferase GD578_02165 PF01810 LysE type translocator GD578_02180 PF04102 SlyX GD578_02185 PF08240 Alcohol dehydrogenase GroES-like domain GD578_02185 PF00107 Zinc-binding dehydrogenase GD578_02190 PF01638 HxlR-like helix-turn-helix GD578_02200 PF08272 Topoisomerase I zinc-ribbon-like GD578_02200 PF01131 DNA topoisomerase GD578_02200 PF01396 Topoisomerase DNA binding C4 zinc finger GD578_02200 PF01751 Toprim domain GD578_02215 PF13361 UvrD-like helicase C-terminal domain GD578_02215 PF00580 UvrD/REP helicase N-terminal domain GD578_02220 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GD578_02240 PF00999 Sodium/hydrogen exchanger family GD578_02240 PF02254 TrkA-N domain GD578_02245 PF00471 Ribosomal protein L33 GD578_02250 PF00830 Ribosomal L28 family GD578_02255 PF00171 Aldehyde dehydrogenase family GD578_02265 PF01842 ACT domain GD578_02265 PF00551 Formyl transferase GD578_02275 PF01618 MotA/TolQ/ExbB proton channel family GD578_02280 PF02472 Biopolymer transport protein ExbD/TolR GD578_02285 PF01625 Peptide methionine sulfoxide reductase GD578_02300 PF00186 Dihydrofolate reductase GD578_02305 PF00303 Thymidylate synthase GD578_02320 PF01790 Prolipoprotein diacylglyceryl transferase GD578_02340 PF00902 Sec-independent protein translocase protein (TatC) GD578_02345 PF02416 mttA/Hcf106 family GD578_02350 PF02416 mttA/Hcf106 family GD578_02360 PF01725 Ham1 family GD578_02370 PF00561 alpha/beta hydrolase fold GD578_02370 PF07021 Methionine biosynthesis protein MetW GD578_02375 PF00561 alpha/beta hydrolase fold GD578_02380 PF08502 LeuA allosteric (dimerisation) domain GD578_02380 PF00682 HMGL-like GD578_02385 PF18331 PKHD-type hydroxylase C-terminal domain GD578_02385 PF13640 2OG-Fe(II) oxygenase superfamily GD578_02390 PF00593 TonB dependent receptor GD578_02390 PF07715 TonB-dependent Receptor Plug Domain GD578_02395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GD578_02395 PF05697 Bacterial trigger factor protein (TF) GD578_02395 PF05698 Bacterial trigger factor protein (TF) C-terminus GD578_02400 PF00574 Clp protease GD578_02405 PF06689 ClpX C4-type zinc finger GD578_02405 PF07724 AAA domain (Cdc48 subfamily) GD578_02405 PF10431 C-terminal, D2-small domain, of ClpB protein GD578_02420 PF05683 Fumarase C-terminus GD578_02420 PF05681 Fumarate hydratase (Fumerase) GD578_02425 PF07085 DRTGG domain GD578_02425 PF01515 Phosphate acetyl/butaryl transferase GD578_02430 PF00871 Acetokinase family GD578_02435 PF00920 Dehydratase family GD578_02440 PF01081 KDPG and KHG aldolase GD578_02445 PF02447 GntP family permease GD578_02450 PF01202 Shikimate kinase GD578_02455 PF00171 Aldehyde dehydrogenase family GD578_02460 PF00171 Aldehyde dehydrogenase family GD578_02465 PF00561 alpha/beta hydrolase fold GD578_02475 PF00933 Glycosyl hydrolase family 3 N terminal domain GD578_02480 PF11818 C-terminal domain of tail specific protease (DUF3340) GD578_02480 PF17804 Tail specific protease N-terminal domain GD578_02480 PF03572 Peptidase family S41 GD578_02480 PF00595 PDZ domain GD578_02485 PF00534 Glycosyl transferases group 1 GD578_02485 PF13439 Glycosyltransferase Family 4 GD578_02490 PF01569 PAP2 superfamily GD578_02495 PF04384 Iron-sulphur cluster assembly GD578_02500 PF00334 Nucleoside diphosphate kinase GD578_02505 PF04055 Radical SAM superfamily GD578_02515 PF13464 Domain of unknown function (DUF4115) GD578_02520 PF04551 GcpE protein GD578_02525 PF13393 Histidyl-tRNA synthetase GD578_02525 PF03129 Anticodon binding domain GD578_02535 PF13360 PQQ-like domain GD578_02535 PF01011 PQQ enzyme repeat GD578_02540 PF01926 50S ribosome-binding GTPase GD578_02540 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GD578_02550 PF02556 Preprotein translocase subunit SecB GD578_02555 PF00462 Glutaredoxin GD578_02565 PF03193 RsgA GTPase GD578_02570 PF00929 Exonuclease GD578_02585 PF02321 Outer membrane efflux protein GD578_02590 PF00005 ABC transporter GD578_02590 PF12704 MacB-like periplasmic core domain GD578_02590 PF02687 FtsX-like permease family GD578_02595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD578_02610 PF08264 Anticodon-binding domain of tRNA GD578_02610 PF13603 Leucyl-tRNA synthetase, Domain 2 GD578_02610 PF00133 tRNA synthetases class I (I, L, M and V) GD578_02610 PF09334 tRNA synthetases class I (M) GD578_02620 PF00205 Thiamine pyrophosphate enzyme, central domain GD578_02620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD578_02620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GD578_02625 PF10369 Small subunit of acetolactate synthase GD578_02630 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GD578_02630 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GD578_02635 PF00563 EAL domain GD578_02635 PF00990 Diguanylate cyclase, GGDEF domain GD578_02635 PF03707 Bacterial signalling protein N terminal repeat GD578_02750 PF02384 N-6 DNA Methylase GD578_02750 PF12161 HsdM N-terminal domain GD578_02755 PF01420 Type I restriction modification DNA specificity domain GD578_02775 PF02661 Fic/DOC family GD578_02775 PF13784 Fic/DOC family N-terminal GD578_02790 PF08240 Alcohol dehydrogenase GroES-like domain GD578_02790 PF00107 Zinc-binding dehydrogenase GD578_02795 PF00106 short chain dehydrogenase GD578_02800 PF03466 LysR substrate binding domain GD578_02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_02805 PF08240 Alcohol dehydrogenase GroES-like domain GD578_02805 PF00107 Zinc-binding dehydrogenase GD578_02810 PF08659 KR domain GD578_02810 PF00698 Acyl transferase domain GD578_02810 PF08240 Alcohol dehydrogenase GroES-like domain GD578_02810 PF00107 Zinc-binding dehydrogenase GD578_02810 PF16197 Ketoacyl-synthetase C-terminal extension GD578_02810 PF00109 Beta-ketoacyl synthase, N-terminal domain GD578_02810 PF02801 Beta-ketoacyl synthase, C-terminal domain GD578_02810 PF00550 Phosphopantetheine attachment site GD578_02810 PF14765 Polyketide synthase dehydratase GD578_02815 PF02583 Metal-sensitive transcriptional repressor GD578_02820 PF00107 Zinc-binding dehydrogenase GD578_02820 PF08240 Alcohol dehydrogenase GroES-like domain GD578_02825 PF00756 Putative esterase GD578_02835 PF00465 Iron-containing alcohol dehydrogenase GD578_02855 PF00440 Bacterial regulatory proteins, tetR family GD578_02855 PF16925 Tetracyclin repressor-like, C-terminal domain GD578_02860 PF16884 N-terminal domain of oxidoreductase GD578_02860 PF00107 Zinc-binding dehydrogenase GD578_02870 PF04151 Bacterial pre-peptidase C-terminal domain GD578_02885 PF00009 Elongation factor Tu GTP binding domain GD578_02885 PF16658 Class II release factor RF3, C-terminal domain GD578_02885 PF03144 Elongation factor Tu domain 2 GD578_02900 PF01026 TatD related DNase GD578_02905 PF00330 Aconitase family (aconitate hydratase) GD578_02905 PF00694 Aconitase C-terminal domain GD578_02910 PF00899 ThiF family GD578_02920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_02920 PF03466 LysR substrate binding domain GD578_02930 PF01207 Dihydrouridine synthase (Dus) GD578_02935 PF00589 Phage integrase family GD578_03005 PF04945 YHS domain GD578_03010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_03010 PF00512 His Kinase A (phospho-acceptor) domain GD578_03010 PF00672 HAMP domain GD578_03015 PF00072 Response regulator receiver domain GD578_03015 PF00486 Transcriptional regulatory protein, C terminal GD578_03025 PF07732 Multicopper oxidase GD578_03025 PF07731 Multicopper oxidase GD578_03025 PF00394 Multicopper oxidase GD578_03045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD578_03055 PF13340 Putative transposase of IS4/5 family (DUF4096) GD578_03070 PF07670 Nucleoside recognition GD578_03070 PF02421 Ferrous iron transport protein B GD578_03070 PF07664 Ferrous iron transport protein B C terminus GD578_03085 PF13411 MerR HTH family regulatory protein GD578_03090 PF03960 ArsC family GD578_03095 PF01022 Bacterial regulatory protein, arsR family GD578_03105 PF01758 Sodium Bile acid symporter family GD578_03110 PF03358 NADPH-dependent FMN reductase GD578_03115 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_03145 PF07690 Major Facilitator Superfamily GD578_03155 PF00892 EamA-like transporter family GD578_03160 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GD578_03160 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GD578_03165 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GD578_03170 PF02233 NAD(P) transhydrogenase beta subunit GD578_03175 PF00106 short chain dehydrogenase GD578_03185 PF01261 Xylose isomerase-like TIM barrel GD578_03190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GD578_03190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GD578_03195 PF00378 Enoyl-CoA hydratase/isomerase GD578_03200 PF00512 His Kinase A (phospho-acceptor) domain GD578_03200 PF01627 Hpt domain GD578_03200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GD578_03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_03200 PF00072 Response regulator receiver domain GD578_03200 PF00672 HAMP domain GD578_03205 PF00291 Pyridoxal-phosphate dependent enzyme GD578_03215 PF05958 tRNA (Uracil-5-)-methyltransferase GD578_03220 PF04607 Region found in RelA / SpoT proteins GD578_03220 PF13291 ACT domain GD578_03220 PF02824 TGS domain GD578_03230 PF03819 MazG nucleotide pyrophosphohydrolase domain GD578_03240 PF01743 Poly A polymerase head domain GD578_03240 PF12626 Polymerase A arginine-rich C-terminus GD578_03240 PF12627 Probable RNA and SrmB- binding site of polymerase A GD578_03245 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GD578_03250 PF02548 Ketopantoate hydroxymethyltransferase GD578_03255 PF02569 Pantoate-beta-alanine ligase GD578_03260 PF03668 P-loop ATPase protein family GD578_03265 PF00381 PTS HPr component phosphorylation site GD578_03270 PF04751 Protein of unknown function (DUF615) GD578_03275 PF13193 AMP-binding enzyme C-terminal domain GD578_03275 PF00501 AMP-binding enzyme GD578_03280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GD578_03280 PF02824 TGS domain GD578_03280 PF03129 Anticodon binding domain GD578_03280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GD578_03285 PF00707 Translation initiation factor IF-3, C-terminal domain GD578_03285 PF05198 Translation initiation factor IF-3, N-terminal domain GD578_03290 PF02798 Glutathione S-transferase, N-terminal domain GD578_03290 PF00043 Glutathione S-transferase, C-terminal domain GD578_03295 PF09335 SNARE associated Golgi protein GD578_03300 PF07690 Major Facilitator Superfamily GD578_03305 PF01632 Ribosomal protein L35 GD578_03310 PF00453 Ribosomal protein L20 GD578_03330 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GD578_03330 PF01409 tRNA synthetases class II core domain (F) GD578_03335 PF03147 Ferredoxin-fold anticodon binding domain GD578_03335 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GD578_03335 PF03483 B3/4 domain GD578_03335 PF03484 tRNA synthetase B5 domain GD578_03335 PF01588 Putative tRNA binding domain GD578_03340 PF00216 Bacterial DNA-binding protein GD578_03355 PF07498 Rho termination factor, N-terminal domain GD578_03355 PF07497 Rho termination factor, RNA-binding domain GD578_03355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GD578_03360 PF00085 Thioredoxin GD578_03365 PF02541 Ppx/GppA phosphatase family GD578_03370 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GD578_03375 PF01171 PP-loop family GD578_03375 PF09179 TilS substrate binding domain GD578_03375 PF11734 TilS substrate C-terminal domain GD578_03380 PF03807 NADP oxidoreductase coenzyme F420-dependent GD578_03380 PF14748 Pyrroline-5-carboxylate reductase dimerisation GD578_03385 PF02325 YGGT family GD578_03390 PF00476 DNA polymerase family A GD578_03390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GD578_03390 PF01367 5'-3' exonuclease, C-terminal SAM fold GD578_03390 PF01612 3'-5' exonuclease GD578_03395 PF00872 Transposase, Mutator family GD578_03415 PF00437 Type II/IV secretion system protein GD578_03420 PF02566 OsmC-like protein GD578_03425 PF01047 MarR family GD578_03435 PF00795 Carbon-nitrogen hydrolase GD578_03480 PF04963 Sigma-54 factor, core binding domain GD578_03480 PF04552 Sigma-54, DNA binding domain GD578_03480 PF00309 Sigma-54 factor, Activator interacting domain (AID) GD578_03485 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GD578_03490 PF01722 BolA-like protein GD578_03495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GD578_03500 PF01634 ATP phosphoribosyltransferase GD578_03505 PF00815 Histidinol dehydrogenase GD578_03510 PF00155 Aminotransferase class I and II GD578_03515 PF00425 chorismate binding enzyme GD578_03515 PF04715 Anthranilate synthase component I, N terminal region GD578_03555 PF00293 NUDIX domain GD578_03560 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_03565 PF00814 Glycoprotease family GD578_03570 PF04445 Putative SAM-dependent methyltransferase GD578_03580 PF00756 Putative esterase GD578_03590 PF00834 Ribulose-phosphate 3 epimerase family GD578_03605 PF07732 Multicopper oxidase GD578_03605 PF07731 Multicopper oxidase GD578_03605 PF00394 Multicopper oxidase GD578_03620 PF00893 Small Multidrug Resistance protein GD578_03625 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GD578_03625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GD578_03630 PF01960 ArgJ family GD578_03635 PF02445 Quinolinate synthetase A protein GD578_03715 PF01471 Putative peptidoglycan binding domain GD578_03715 PF01520 N-acetylmuramoyl-L-alanine amidase GD578_03840 PF10549 ORF11CD3 domain GD578_03840 PF09669 Phage regulatory protein Rha (Phage_pRha) GD578_03870 PF00005 ABC transporter GD578_03900 PF00929 Exonuclease GD578_03905 PF12167 Arm DNA-binding domain GD578_03905 PF00589 Phage integrase family GD578_03915 PF00962 Adenosine/AMP deaminase GD578_03920 PF08240 Alcohol dehydrogenase GroES-like domain GD578_03920 PF00107 Zinc-binding dehydrogenase GD578_03925 PF03466 LysR substrate binding domain GD578_03925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_03930 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_03930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_03930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_03935 PF07690 Major Facilitator Superfamily GD578_03940 PF02515 CoA-transferase family III GD578_03945 PF00440 Bacterial regulatory proteins, tetR family GD578_03945 PF17932 Tetracyclin repressor-like, C-terminal domain GD578_03960 PF00890 FAD binding domain GD578_03960 PF14537 Cytochrome c3 GD578_03965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_03965 PF03466 LysR substrate binding domain GD578_03975 PF07690 Major Facilitator Superfamily GD578_03985 PF03466 LysR substrate binding domain GD578_03985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_03990 PF01810 LysE type translocator GD578_03995 PF03466 LysR substrate binding domain GD578_03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_04005 PF01717 Cobalamin-independent synthase, Catalytic domain GD578_04005 PF08267 Cobalamin-independent synthase, N-terminal domain GD578_04010 PF01613 Flavin reductase like domain GD578_04020 PF00440 Bacterial regulatory proteins, tetR family GD578_04020 PF16295 Tetracyclin repressor-like, C-terminal domain GD578_04025 PF00872 Transposase, Mutator family GD578_04035 PF00268 Ribonucleotide reductase, small chain GD578_04055 PF07693 KAP family P-loop domain GD578_04085 PF00872 Transposase, Mutator family GD578_04110 PF03477 ATP cone domain GD578_04110 PF00317 Ribonucleotide reductase, all-alpha domain GD578_04110 PF02867 Ribonucleotide reductase, barrel domain GD578_04120 PF00072 Response regulator receiver domain GD578_04120 PF00486 Transcriptional regulatory protein, C terminal GD578_04125 PF00512 His Kinase A (phospho-acceptor) domain GD578_04125 PF00672 HAMP domain GD578_04125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_04135 PF00990 Diguanylate cyclase, GGDEF domain GD578_04135 PF17151 Periplasmic sensor domain GD578_04140 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GD578_04145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GD578_04150 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GD578_04150 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GD578_04160 PF10531 SLBB domain GD578_04160 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GD578_04160 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GD578_04165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GD578_04165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GD578_04165 PF00384 Molybdopterin oxidoreductase GD578_04170 PF00146 NADH dehydrogenase GD578_04175 PF12838 4Fe-4S dicluster domain GD578_04180 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GD578_04185 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GD578_04190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GD578_04190 PF00361 Proton-conducting membrane transporter GD578_04195 PF00361 Proton-conducting membrane transporter GD578_04200 PF00361 Proton-conducting membrane transporter GD578_04210 PF00313 'Cold-shock' DNA-binding domain GD578_04220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_04220 PF03466 LysR substrate binding domain GD578_04225 PF00175 Oxidoreductase NAD-binding domain GD578_04225 PF00970 Oxidoreductase FAD-binding domain GD578_04240 PF05552 Conserved TM helix GD578_04255 PF00291 Pyridoxal-phosphate dependent enzyme GD578_04260 PF13533 Biotin-lipoyl like GD578_04290 PF01588 Putative tRNA binding domain GD578_04290 PF09334 tRNA synthetases class I (M) GD578_04305 PF10609 NUBPL iron-transfer P-loop NTPase GD578_04310 PF01048 Phosphorylase superfamily GD578_04325 PF00692 dUTPase GD578_04360 PF01207 Dihydrouridine synthase (Dus) GD578_04370 PF00448 SRP54-type protein, GTPase domain GD578_04370 PF02978 Signal peptide binding domain GD578_04370 PF02881 SRP54-type protein, helical bundle domain GD578_04375 PF03309 Type III pantothenate kinase GD578_04385 PF01925 Sulfite exporter TauE/SafE GD578_04395 PF02463 RecF/RecN/SMC N terminal domain GD578_04395 PF06470 SMC proteins Flexible Hinge Domain GD578_04405 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GD578_04405 PF01653 NAD-dependent DNA ligase adenylation domain GD578_04405 PF03120 NAD-dependent DNA ligase OB-fold domain GD578_04405 PF12826 Helix-hairpin-helix motif GD578_04405 PF00533 BRCA1 C Terminus (BRCT) domain GD578_04410 PF00210 Ferritin-like domain GD578_04415 PF07690 Major Facilitator Superfamily GD578_04420 PF00982 Glycosyltransferase family 20 GD578_04425 PF02358 Trehalose-phosphatase GD578_04430 PF08241 Methyltransferase domain GD578_04430 PF12697 Alpha/beta hydrolase family GD578_04435 PF04055 Radical SAM superfamily GD578_04435 PF06968 Biotin and Thiamin Synthesis associated domain GD578_04435 PF00202 Aminotransferase class-III GD578_04440 PF00155 Aminotransferase class I and II GD578_04455 PF01479 S4 domain GD578_04455 PF00849 RNA pseudouridylate synthase GD578_04460 PF04079 Segregation and condensation complex subunit ScpB GD578_04465 PF02616 Segregation and condensation protein ScpA GD578_04470 PF01300 Telomere recombination GD578_04475 PF04315 Elongation factor P hydroxylase GD578_04480 PF02620 Large ribosomal RNA subunit accumulation protein YceD GD578_04485 PF01783 Ribosomal L32p protein family GD578_04490 PF00698 Acyl transferase domain GD578_04500 PF00550 Phosphopantetheine attachment site GD578_04505 PF01476 LysM domain GD578_04505 PF04972 BON domain GD578_04510 PF02581 Thiamine monophosphate synthase GD578_04510 PF03070 TENA/THI-4/PQQC family GD578_04510 PF08543 Phosphomethylpyrimidine kinase GD578_04520 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GD578_04535 PF02261 Aspartate decarboxylase GD578_04540 PF01195 Peptidyl-tRNA hydrolase GD578_04545 PF01386 Ribosomal L25p family GD578_04550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GD578_04550 PF14572 Phosphoribosyl synthetase-associated domain GD578_04575 PF00288 GHMP kinases N terminal domain GD578_04575 PF08544 GHMP kinases C terminal GD578_04580 PF03550 Outer membrane lipoprotein LolB GD578_04590 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GD578_04590 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GD578_04590 PF01488 Shikimate / quinate 5-dehydrogenase GD578_04595 PF08278 DNA primase DnaG DnaB-binding GD578_04595 PF08275 DNA primase catalytic core, N-terminal domain GD578_04595 PF01807 CHC2 zinc finger GD578_04595 PF10410 DnaB-helicase binding domain of primase GD578_04600 PF13525 Outer membrane lipoprotein GD578_04605 PF01479 S4 domain GD578_04605 PF00849 RNA pseudouridylate synthase GD578_04615 PF03358 NADPH-dependent FMN reductase GD578_04625 PF01668 SmpB protein GD578_04630 PF01467 Cytidylyltransferase-like GD578_04635 PF00037 4Fe-4S binding domain GD578_04665 PF00795 Carbon-nitrogen hydrolase GD578_04665 PF02540 NAD synthase GD578_04675 PF05726 Pirin C-terminal cupin domain GD578_04675 PF02678 Pirin GD578_04690 PF00109 Beta-ketoacyl synthase, N-terminal domain GD578_04690 PF02801 Beta-ketoacyl synthase, C-terminal domain GD578_04700 PF00164 Ribosomal protein S12/S23 GD578_04705 PF00177 Ribosomal protein S7p/S5e GD578_04710 PF03144 Elongation factor Tu domain 2 GD578_04710 PF14492 Elongation Factor G, domain II GD578_04710 PF03764 Elongation factor G, domain IV GD578_04710 PF00679 Elongation factor G C-terminus GD578_04710 PF00009 Elongation factor Tu GTP binding domain GD578_04715 PF03144 Elongation factor Tu domain 2 GD578_04715 PF03143 Elongation factor Tu C-terminal domain GD578_04715 PF00009 Elongation factor Tu GTP binding domain GD578_04730 PF00583 Acetyltransferase (GNAT) family GD578_04735 PF04377 Arginine-tRNA-protein transferase, C terminus GD578_04735 PF04376 Arginine-tRNA-protein transferase, N terminus GD578_04740 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GD578_04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_04750 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GD578_04750 PF01580 FtsK/SpoIIIE family GD578_04750 PF17854 FtsK alpha domain GD578_04750 PF09397 Ftsk gamma domain GD578_04755 PF01810 LysE type translocator GD578_04765 PF03776 Septum formation topological specificity factor MinE GD578_04770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GD578_04775 PF03775 Septum formation inhibitor MinC, C-terminal domain GD578_04785 PF01553 Acyltransferase GD578_04790 PF13488 Glycine zipper GD578_04790 PF00691 OmpA family GD578_04795 PF13361 UvrD-like helicase C-terminal domain GD578_04795 PF00580 UvrD/REP helicase N-terminal domain GD578_04800 PF00692 dUTPase GD578_04805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GD578_04805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GD578_04805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GD578_04805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GD578_04810 PF00696 Amino acid kinase family GD578_04820 PF13230 Glutamine amidotransferases class-II GD578_04825 PF01814 Hemerythrin HHE cation binding domain GD578_04845 PF03658 RnfH family Ubiquitin GD578_04850 PF04355 SmpA / OmlA family GD578_04855 PF01475 Ferric uptake regulator family GD578_04860 PF00437 Type II/IV secretion system protein GD578_04865 PF00437 Type II/IV secretion system protein GD578_04870 PF01168 Alanine racemase, N-terminal domain GD578_04875 PF02673 Bacitracin resistance protein BacA GD578_04885 PF00149 Calcineurin-like phosphoesterase GD578_04885 PF12320 Type 5 capsule protein repressor C-terminal domain GD578_04905 PF08338 Domain of unknown function (DUF1731) GD578_04905 PF01370 NAD dependent epimerase/dehydratase family GD578_04910 PF01266 FAD dependent oxidoreductase GD578_04915 PF00490 Delta-aminolevulinic acid dehydratase GD578_04920 PF03061 Thioesterase superfamily GD578_04925 PF13533 Biotin-lipoyl like GD578_04930 PF07690 Major Facilitator Superfamily GD578_04950 PF13737 Transposase DDE domain GD578_04980 PF13520 Amino acid permease GD578_04985 PF02574 Homocysteine S-methyltransferase GD578_04995 PF06039 Malate:quinone oxidoreductase (Mqo) GD578_05000 PF05199 GMC oxidoreductase GD578_05000 PF00732 GMC oxidoreductase GD578_05005 PF00171 Aldehyde dehydrogenase family GD578_05010 PF13977 BetI-type transcriptional repressor, C-terminal GD578_05010 PF00440 Bacterial regulatory proteins, tetR family GD578_05015 PF02028 BCCT, betaine/carnitine/choline family transporter GD578_05020 PF02028 BCCT, betaine/carnitine/choline family transporter GD578_05030 PF03061 Thioesterase superfamily GD578_05040 PF07683 Cobalamin synthesis protein cobW C-terminal domain GD578_05040 PF02492 CobW/HypB/UreG, nucleotide-binding domain GD578_05045 PF00375 Sodium:dicarboxylate symporter family GD578_05050 PF07152 YaeQ protein GD578_05055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GD578_05060 PF01522 Polysaccharide deacetylase GD578_05060 PF14883 Hypothetical glycosyl hydrolase family 13 GD578_05065 PF00535 Glycosyl transferase family 2 GD578_05075 PF00378 Enoyl-CoA hydratase/isomerase GD578_05110 PF01958 Domain of unknown function DUF108 GD578_05110 PF03447 Homoserine dehydrogenase, NAD binding domain GD578_05115 PF00171 Aldehyde dehydrogenase family GD578_05120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GD578_05120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD578_05120 PF00205 Thiamine pyrophosphate enzyme, central domain GD578_05130 PF08946 Osmosensory transporter coiled coil GD578_05130 PF00083 Sugar (and other) transporter GD578_05135 PF01327 Polypeptide deformylase GD578_05140 PF04960 Glutaminase GD578_05160 PF02965 Vitamin B12 dependent methionine synthase, activation domain GD578_05160 PF02607 B12 binding domain GD578_05160 PF02574 Homocysteine S-methyltransferase GD578_05160 PF02310 B12 binding domain GD578_05160 PF00809 Pterin binding enzyme GD578_05170 PF01384 Phosphate transporter family GD578_05190 PF03781 Sulfatase-modifying factor enzyme 1 GD578_05195 PF00884 Sulfatase GD578_05205 PF01521 Iron-sulphur cluster biosynthesis GD578_05205 PF01106 NifU-like domain GD578_05210 PF07715 TonB-dependent Receptor Plug Domain GD578_05210 PF00593 TonB dependent receptor GD578_05220 PF00561 alpha/beta hydrolase fold GD578_05225 PF00484 Carbonic anhydrase GD578_05230 PF13472 GDSL-like Lipase/Acylhydrolase family GD578_05235 PF00005 ABC transporter GD578_05245 PF01694 Rhomboid family GD578_05250 PF00912 Transglycosylase GD578_05255 PF02503 Polyphosphate kinase middle domain GD578_05255 PF13090 Polyphosphate kinase C-terminal domain 2 GD578_05255 PF17941 Polyphosphate kinase C-terminal domain 1 GD578_05255 PF13089 Polyphosphate kinase N-terminal domain GD578_05265 PF03466 LysR substrate binding domain GD578_05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_05270 PF00561 alpha/beta hydrolase fold GD578_05275 PF18113 Rubredoxin binding C-terminal domain GD578_05275 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_05280 PF00301 Rubredoxin GD578_05295 PF00152 tRNA synthetases class II (D, K and N) GD578_05295 PF01336 OB-fold nucleic acid binding domain GD578_05300 PF14052 Capsule assembly protein Wzi GD578_05310 PF01507 Phosphoadenosine phosphosulfate reductase family GD578_05315 PF00009 Elongation factor Tu GTP binding domain GD578_05330 PF03600 Citrate transporter GD578_05335 PF00571 CBS domain GD578_05335 PF03471 Transporter associated domain GD578_05335 PF01595 Cyclin M transmembrane N-terminal domain GD578_05340 PF03466 LysR substrate binding domain GD578_05340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_05350 PF00463 Isocitrate lyase family GD578_05355 PF13340 Putative transposase of IS4/5 family (DUF4096) GD578_05375 PF01774 UreD urease accessory protein GD578_05380 PF00547 Urease, gamma subunit GD578_05385 PF00699 Urease beta subunit GD578_05390 PF00449 Urease alpha-subunit, N-terminal domain GD578_05390 PF01979 Amidohydrolase family GD578_05395 PF02814 UreE urease accessory protein, N-terminal domain GD578_05395 PF05194 UreE urease accessory protein, C-terminal domain GD578_05400 PF01730 UreF GD578_05405 PF02492 CobW/HypB/UreG, nucleotide-binding domain GD578_05425 PF03717 Penicillin-binding Protein dimerisation domain GD578_05425 PF00905 Penicillin binding protein transpeptidase domain GD578_05440 PF05191 Adenylate kinase, active site lid GD578_05450 PF00730 HhH-GPD superfamily base excision DNA repair protein GD578_05450 PF00633 Helix-hairpin-helix motif GD578_05450 PF10576 Iron-sulfur binding domain of endonuclease III GD578_05455 PF04060 Putative Fe-S cluster GD578_05460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GD578_05460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GD578_05470 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GD578_05475 PF02590 Predicted SPOUT methyltransferase GD578_05480 PF05362 Lon protease (S16) C-terminal proteolytic domain GD578_05480 PF02190 ATP-dependent protease La (LON) substrate-binding domain GD578_05480 PF00004 ATPase family associated with various cellular activities (AAA) GD578_05490 PF03895 YadA-like membrane anchor domain GD578_05490 PF13018 Extended Signal Peptide of Type V secretion system GD578_05490 PF05662 Coiled stalk of trimeric autotransporter adhesin GD578_05490 PF05658 Head domain of trimeric autotransporter adhesin GD578_05500 PF05662 Coiled stalk of trimeric autotransporter adhesin GD578_05500 PF05658 Head domain of trimeric autotransporter adhesin GD578_05500 PF13018 Extended Signal Peptide of Type V secretion system GD578_05500 PF03895 YadA-like membrane anchor domain GD578_05515 PF01812 5-formyltetrahydrofolate cyclo-ligase family GD578_05550 PF00557 Metallopeptidase family M24 GD578_05550 PF05195 Aminopeptidase P, N-terminal domain GD578_05555 PF01494 FAD binding domain GD578_05560 PF01494 FAD binding domain GD578_05570 PF13411 MerR HTH family regulatory protein GD578_05580 PF01810 LysE type translocator GD578_05585 PF03466 LysR substrate binding domain GD578_05585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_05595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GD578_05600 PF02021 Uncharacterised protein family UPF0102 GD578_05605 PF04972 BON domain GD578_05615 PF09297 NADH pyrophosphatase zinc ribbon domain GD578_05615 PF00293 NUDIX domain GD578_05625 PF00929 Exonuclease GD578_05630 PF01476 LysM domain GD578_05630 PF01464 Transglycosylase SLT domain GD578_05630 PF01476 LysM domain GD578_05630 PF01464 Transglycosylase SLT domain GD578_05635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GD578_05640 PF00528 Binding-protein-dependent transport system inner membrane component GD578_05645 PF00528 Binding-protein-dependent transport system inner membrane component GD578_05645 PF12911 N-terminal TM domain of oligopeptide transport permease C GD578_05650 PF00005 ABC transporter GD578_05650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GD578_05675 PF00929 Exonuclease GD578_05680 PF01979 Amidohydrolase family GD578_05685 PF00360 Phytochrome region GD578_05685 PF00563 EAL domain GD578_05685 PF00990 Diguanylate cyclase, GGDEF domain GD578_05685 PF01590 GAF domain GD578_05690 PF00764 Arginosuccinate synthase GD578_05700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GD578_05700 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_05715 PF03180 NLPA lipoprotein GD578_05820 PF03783 Curli production assembly/transport component CsgG GD578_05830 PF05643 Putative bacterial lipoprotein (DUF799) GD578_05840 PF00324 Amino acid permease GD578_05845 PF01266 FAD dependent oxidoreductase GD578_05850 PF00324 Amino acid permease GD578_05860 PF07729 FCD domain GD578_05860 PF00392 Bacterial regulatory proteins, gntR family GD578_05870 PF00171 Aldehyde dehydrogenase family GD578_05880 PF00202 Aminotransferase class-III GD578_05885 PF04958 Arginine N-succinyltransferase beta subunit GD578_05890 PF00324 Amino acid permease GD578_05895 PF00171 Aldehyde dehydrogenase family GD578_05900 PF12833 Helix-turn-helix domain GD578_05900 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GD578_05910 PF00892 EamA-like transporter family GD578_05915 PF07519 Tannase and feruloyl esterase GD578_05925 PF03573 outer membrane porin, OprD family GD578_05930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_05930 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_05930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_05940 PF00171 Aldehyde dehydrogenase family GD578_05945 PF00378 Enoyl-CoA hydratase/isomerase GD578_05950 PF07690 Major Facilitator Superfamily GD578_05965 PF00175 Oxidoreductase NAD-binding domain GD578_05965 PF00111 2Fe-2S iron-sulfur cluster binding domain GD578_05970 PF00355 Rieske [2Fe-2S] domain GD578_05975 PF07690 Major Facilitator Superfamily GD578_05980 PF03573 outer membrane porin, OprD family GD578_05985 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding GD578_05985 PF18381 YcaO cyclodehydratase C-terminal domain GD578_05990 PF05199 GMC oxidoreductase GD578_05995 PF07859 alpha/beta hydrolase fold GD578_06000 PF00106 short chain dehydrogenase GD578_06005 PF00743 Flavin-binding monooxygenase-like GD578_06010 PF12833 Helix-turn-helix domain GD578_06010 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GD578_06015 PF04072 Leucine carboxyl methyltransferase GD578_06020 PF00743 Flavin-binding monooxygenase-like GD578_06025 PF00106 short chain dehydrogenase GD578_06035 PF17932 Tetracyclin repressor-like, C-terminal domain GD578_06035 PF00440 Bacterial regulatory proteins, tetR family GD578_06040 PF02678 Pirin GD578_06040 PF17954 Quercetinase C-terminal cupin domain GD578_06050 PF00106 short chain dehydrogenase GD578_06055 PF00743 Flavin-binding monooxygenase-like GD578_06065 PF00860 Permease family GD578_06070 PF00962 Adenosine/AMP deaminase GD578_06075 PF01292 Prokaryotic cytochrome b561 GD578_06085 PF01351 Ribonuclease HII GD578_06090 PF02599 Global regulator protein family GD578_06095 PF01842 ACT domain GD578_06095 PF00696 Amino acid kinase family GD578_06095 PF13840 ACT domain GD578_06225 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system GD578_06325 PF00884 Sulfatase GD578_06325 PF08019 Phosphoethanolamine transferase EptA/EptB GD578_06330 PF00589 Phage integrase family GD578_06330 PF13356 Arm DNA-binding domain GD578_06335 PF02272 DHHA1 domain GD578_06335 PF01411 tRNA synthetases class II (A) GD578_06335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GD578_06340 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GD578_06340 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GD578_06345 PF13393 Histidyl-tRNA synthetase GD578_06350 PF00709 Adenylosuccinate synthetase GD578_06365 PF00248 Aldo/keto reductase family GD578_06370 PF13545 Crp-like helix-turn-helix domain GD578_06370 PF00027 Cyclic nucleotide-binding domain GD578_06375 PF02566 OsmC-like protein GD578_06390 PF17871 AAA lid domain GD578_06390 PF00004 ATPase family associated with various cellular activities (AAA) GD578_06390 PF07724 AAA domain (Cdc48 subfamily) GD578_06390 PF02861 Clp amino terminal domain, pathogenicity island component GD578_06390 PF10431 C-terminal, D2-small domain, of ClpB protein GD578_06405 PF10672 S-adenosylmethionine-dependent methyltransferase GD578_06405 PF01170 Putative RNA methylase family UPF0020 GD578_06405 PF02926 THUMP domain GD578_06415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GD578_06415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GD578_06420 PF01979 Amidohydrolase family GD578_06425 PF01389 OmpA-like transmembrane domain GD578_06425 PF00691 OmpA family GD578_06440 PF02390 Putative methyltransferase GD578_06450 PF02798 Glutathione S-transferase, N-terminal domain GD578_06450 PF00043 Glutathione S-transferase, C-terminal domain GD578_06460 PF13192 Thioredoxin domain GD578_06460 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_06470 PF05175 Methyltransferase small domain GD578_06480 PF10417 C-terminal domain of 1-Cys peroxiredoxin GD578_06480 PF00578 AhpC/TSA family GD578_06485 PF00270 DEAD/DEAH box helicase GD578_06485 PF00271 Helicase conserved C-terminal domain GD578_06485 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GD578_06485 PF04408 Helicase associated domain (HA2) GD578_06485 PF11898 Domain of unknown function (DUF3418) GD578_06490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GD578_06490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GD578_06500 PF07690 Major Facilitator Superfamily GD578_06510 PF03594 Benzoate membrane transport protein GD578_06515 PF00106 short chain dehydrogenase GD578_06520 PF00970 Oxidoreductase FAD-binding domain GD578_06520 PF00175 Oxidoreductase NAD-binding domain GD578_06520 PF00111 2Fe-2S iron-sulfur cluster binding domain GD578_06525 PF00866 Ring hydroxylating beta subunit GD578_06530 PF00355 Rieske [2Fe-2S] domain GD578_06530 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GD578_06535 PF03466 LysR substrate binding domain GD578_06535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_06545 PF00175 Oxidoreductase NAD-binding domain GD578_06545 PF00111 2Fe-2S iron-sulfur cluster binding domain GD578_06545 PF00970 Oxidoreductase FAD-binding domain GD578_06555 PF02332 Methane/Phenol/Toluene Hydroxylase GD578_06555 PF04945 YHS domain GD578_06560 PF02406 MmoB/DmpM family GD578_06565 PF02332 Methane/Phenol/Toluene Hydroxylase GD578_06570 PF06099 Phenol hydroxylase subunit GD578_06580 PF02830 V4R domain GD578_06580 PF02954 Bacterial regulatory protein, Fis family GD578_06580 PF00158 Sigma-54 interaction domain GD578_06580 PF06505 Activator of aromatic catabolism GD578_06590 PF00403 Heavy-metal-associated domain GD578_06595 PF09278 MerR, DNA binding GD578_06595 PF00376 MerR family regulatory protein GD578_06640 PF13742 OB-fold nucleic acid binding domain GD578_06640 PF02601 Exonuclease VII, large subunit GD578_06670 PF01810 LysE type translocator GD578_06675 PF00313 'Cold-shock' DNA-binding domain GD578_06685 PF03807 NADP oxidoreductase coenzyme F420-dependent GD578_06685 PF14748 Pyrroline-5-carboxylate reductase dimerisation GD578_06810 PF01381 Helix-turn-helix GD578_06950 PF00589 Phage integrase family GD578_06960 PF09190 DALR domain GD578_06960 PF01406 tRNA synthetases class I (C) catalytic domain GD578_06965 PF01380 SIS domain GD578_06965 PF00571 CBS domain GD578_06980 PF03968 OstA-like protein GD578_06985 PF00005 ABC transporter GD578_06985 PF12399 Branched-chain amino acid ATP-binding cassette transporter GD578_06990 PF02321 Outer membrane efflux protein GD578_06995 PF00664 ABC transporter transmembrane region GD578_06995 PF00005 ABC transporter GD578_06995 PF03412 Peptidase C39 family GD578_07005 PF01205 Uncharacterized protein family UPF0029 GD578_07010 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_07020 PF01596 O-methyltransferase GD578_07030 PF11953 Domain of unknown function (DUF3470) GD578_07030 PF00037 4Fe-4S binding domain GD578_07040 PF00488 MutS domain V GD578_07040 PF05192 MutS domain III GD578_07040 PF05188 MutS domain II GD578_07040 PF05190 MutS family domain IV GD578_07040 PF01624 MutS domain I GD578_07055 PF00106 short chain dehydrogenase GD578_07060 PF01575 MaoC like domain GD578_07065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_07065 PF12806 Acetyl-CoA dehydrogenase C-terminal like GD578_07065 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_07065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_07070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_07070 PF03466 LysR substrate binding domain GD578_07085 PF00563 EAL domain GD578_07085 PF00990 Diguanylate cyclase, GGDEF domain GD578_07085 PF03707 Bacterial signalling protein N terminal repeat GD578_07110 PF07690 Major Facilitator Superfamily GD578_07140 PF06865 Pyrimidine/purine nucleoside phosphorylase GD578_07145 PF01037 Lrp/AsnC ligand binding domain GD578_07145 PF13404 AsnC-type helix-turn-helix domain GD578_07165 PF01053 Cys/Met metabolism PLP-dependent enzyme GD578_07170 PF00117 Glutamine amidotransferase class-I GD578_07175 PF00313 'Cold-shock' DNA-binding domain GD578_07180 PF07739 TipAS antibiotic-recognition domain GD578_07180 PF13411 MerR HTH family regulatory protein GD578_07195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GD578_07195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GD578_07275 PF05114 Protein of unknown function (DUF692) GD578_07285 PF08281 Sigma-70, region 4 GD578_07285 PF04542 Sigma-70 region 2 GD578_07295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_07295 PF03466 LysR substrate binding domain GD578_07300 PF01566 Natural resistance-associated macrophage protein GD578_07305 PF03746 LamB/YcsF family GD578_07310 PF07286 Protein of unknown function (DUF1445) GD578_07320 PF00364 Biotin-requiring enzyme GD578_07320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GD578_07320 PF02785 Biotin carboxylase C-terminal domain GD578_07320 PF00289 Biotin carboxylase, N-terminal domain GD578_07325 PF00654 Voltage gated chloride channel GD578_07355 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GD578_07355 PF12833 Helix-turn-helix domain GD578_07365 PF08240 Alcohol dehydrogenase GroES-like domain GD578_07365 PF00107 Zinc-binding dehydrogenase GD578_07365 PF13823 Alcohol dehydrogenase GroES-associated GD578_07380 PF02677 Epoxyqueuosine reductase QueH GD578_07390 PF09278 MerR, DNA binding GD578_07390 PF00376 MerR family regulatory protein GD578_07400 PF03313 Serine dehydratase alpha chain GD578_07400 PF03315 Serine dehydratase beta chain GD578_07405 PF00171 Aldehyde dehydrogenase family GD578_07405 PF01575 MaoC like domain GD578_07410 PF05138 Phenylacetic acid catabolic protein GD578_07415 PF06243 Phenylacetic acid degradation B GD578_07420 PF05138 Phenylacetic acid catabolic protein GD578_07425 PF01883 Iron-sulfur cluster assembly protein GD578_07430 PF00970 Oxidoreductase FAD-binding domain GD578_07430 PF00111 2Fe-2S iron-sulfur cluster binding domain GD578_07430 PF00175 Oxidoreductase NAD-binding domain GD578_07435 PF00378 Enoyl-CoA hydratase/isomerase GD578_07440 PF00378 Enoyl-CoA hydratase/isomerase GD578_07445 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GD578_07445 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GD578_07445 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain GD578_07450 PF02803 Thiolase, C-terminal domain GD578_07450 PF00108 Thiolase, N-terminal domain GD578_07455 PF00501 AMP-binding enzyme GD578_07455 PF14535 AMP-binding enzyme C-terminal domain GD578_07460 PF08223 PaaX-like protein C-terminal domain GD578_07460 PF07848 PaaX-like protein GD578_07465 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_07470 PF03061 Thioesterase superfamily GD578_07475 PF03466 LysR substrate binding domain GD578_07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_07500 PF09339 IclR helix-turn-helix domain GD578_07500 PF01614 Bacterial transcriptional regulator GD578_07505 PF01494 FAD binding domain GD578_07510 PF00392 Bacterial regulatory proteins, gntR family GD578_07510 PF07702 UTRA domain GD578_07520 PF00005 ABC transporter GD578_07520 PF08402 TOBE domain GD578_07525 PF00528 Binding-protein-dependent transport system inner membrane component GD578_07530 PF01266 FAD dependent oxidoreductase GD578_07535 PF00266 Aminotransferase class-V GD578_07540 PF13419 Haloacid dehalogenase-like hydrolase GD578_07545 PF07690 Major Facilitator Superfamily GD578_07550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_07550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_07550 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_07555 PF02515 CoA-transferase family III GD578_07560 PF09339 IclR helix-turn-helix domain GD578_07565 PF00378 Enoyl-CoA hydratase/isomerase GD578_07570 PF03060 Nitronate monooxygenase GD578_07575 PF07690 Major Facilitator Superfamily GD578_07580 PF09339 IclR helix-turn-helix domain GD578_07585 PF02803 Thiolase, C-terminal domain GD578_07585 PF00108 Thiolase, N-terminal domain GD578_07590 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain GD578_07590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GD578_07590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GD578_07600 PF00378 Enoyl-CoA hydratase/isomerase GD578_07605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_07605 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_07605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_07610 PF07690 Major Facilitator Superfamily GD578_07615 PF01144 Coenzyme A transferase GD578_07620 PF01144 Coenzyme A transferase GD578_07630 PF07690 Major Facilitator Superfamily GD578_07640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_07640 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_07640 PF12806 Acetyl-CoA dehydrogenase C-terminal like GD578_07640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_07655 PF03466 LysR substrate binding domain GD578_07660 PF00682 HMGL-like GD578_07665 PF00289 Biotin carboxylase, N-terminal domain GD578_07665 PF00364 Biotin-requiring enzyme GD578_07665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GD578_07665 PF02785 Biotin carboxylase C-terminal domain GD578_07670 PF00378 Enoyl-CoA hydratase/isomerase GD578_07675 PF01039 Carboxyl transferase domain GD578_07680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_07680 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_07680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_07685 PF00440 Bacterial regulatory proteins, tetR family GD578_07690 PF00501 AMP-binding enzyme GD578_07690 PF13193 AMP-binding enzyme C-terminal domain GD578_07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_07710 PF03466 LysR substrate binding domain GD578_07760 PF18011 C-terminal domain found in long catalases GD578_07760 PF06628 Catalase-related immune-responsive GD578_07760 PF00199 Catalase GD578_07790 PF00717 Peptidase S24-like GD578_07800 PF13404 AsnC-type helix-turn-helix domain GD578_07800 PF01037 Lrp/AsnC ligand binding domain GD578_07810 PF00512 His Kinase A (phospho-acceptor) domain GD578_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_07810 PF00072 Response regulator receiver domain GD578_07810 PF09308 LuxQ, periplasmic GD578_07815 PF00072 Response regulator receiver domain GD578_07820 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GD578_07830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_07830 PF03466 LysR substrate binding domain GD578_07855 PF00528 Binding-protein-dependent transport system inner membrane component GD578_07860 PF00528 Binding-protein-dependent transport system inner membrane component GD578_07865 PF00005 ABC transporter GD578_07870 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD578_07875 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD578_07885 PF03466 LysR substrate binding domain GD578_07885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_07890 PF01810 LysE type translocator GD578_07895 PF00266 Aminotransferase class-V GD578_07905 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_07910 PF00581 Rhodanese-like domain GD578_07925 PF02798 Glutathione S-transferase, N-terminal domain GD578_07930 PF02798 Glutathione S-transferase, N-terminal domain GD578_07930 PF14834 Glutathione S-transferase, C-terminal domain GD578_07935 PF03466 LysR substrate binding domain GD578_07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_07940 PF03788 LrgA family GD578_07945 PF04172 LrgB-like family GD578_07950 PF00155 Aminotransferase class I and II GD578_07950 PF00392 Bacterial regulatory proteins, gntR family GD578_07965 PF07690 Major Facilitator Superfamily GD578_07970 PF16957 Malonate decarboxylase, alpha subunit, transporter GD578_07975 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GD578_07980 PF06857 Malonate decarboxylase delta subunit (MdcD) GD578_07985 PF01039 Carboxyl transferase domain GD578_07995 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG GD578_08000 PF00698 Acyl transferase domain GD578_08015 PF03466 LysR substrate binding domain GD578_08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_08020 PF00155 Aminotransferase class I and II GD578_08020 PF00392 Bacterial regulatory proteins, gntR family GD578_08030 PF02322 Cytochrome bd terminal oxidase subunit II GD578_08035 PF01654 Cytochrome bd terminal oxidase subunit I GD578_08055 PF00296 Luciferase-like monooxygenase GD578_08060 PF00083 Sugar (and other) transporter GD578_08070 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GD578_08075 PF00005 ABC transporter GD578_08080 PF00528 Binding-protein-dependent transport system inner membrane component GD578_08085 PF02668 Taurine catabolism dioxygenase TauD, TfdA family GD578_08090 PF01177 Asp/Glu/Hydantoin racemase GD578_08095 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GD578_08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_08105 PF03466 LysR substrate binding domain GD578_08115 PF01979 Amidohydrolase family GD578_08115 PF13382 Adenine deaminase C-terminal domain GD578_08125 PF03960 ArsC family GD578_08130 PF01022 Bacterial regulatory protein, arsR family GD578_08135 PF01758 Sodium Bile acid symporter family GD578_08140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_08140 PF03466 LysR substrate binding domain GD578_08155 PF13192 Thioredoxin domain GD578_08155 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_08170 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_08175 PF00588 SpoU rRNA Methylase family GD578_08180 PF01336 OB-fold nucleic acid binding domain GD578_08180 PF02811 PHP domain GD578_08180 PF14579 Helix-hairpin-helix motif GD578_08180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GD578_08180 PF07733 Bacterial DNA polymerase III alpha NTPase domain GD578_08185 PF00710 Asparaginase, N-terminal GD578_08185 PF17763 Glutaminase/Asparaginase C-terminal domain GD578_08190 PF00375 Sodium:dicarboxylate symporter family GD578_08195 PF00155 Aminotransferase class I and II GD578_08200 PF01641 SelR domain GD578_08205 PF00255 Glutathione peroxidase GD578_08210 PF12852 Cupin GD578_08210 PF12833 Helix-turn-helix domain GD578_08215 PF01810 LysE type translocator GD578_08220 PF00155 Aminotransferase class I and II GD578_08225 PF01966 HD domain GD578_08225 PF08335 GlnD PII-uridylyltransferase GD578_08225 PF01909 Nucleotidyltransferase domain GD578_08230 PF02222 ATP-grasp domain GD578_08240 PF05437 Branched-chain amino acid transport protein (AzlD) GD578_08245 PF03591 AzlC protein GD578_08270 PF01926 50S ribosome-binding GTPase GD578_08270 PF06071 Protein of unknown function (DUF933) GD578_08275 PF00528 Binding-protein-dependent transport system inner membrane component GD578_08280 PF00005 ABC transporter GD578_08280 PF09383 NIL domain GD578_08285 PF03180 NLPA lipoprotein GD578_08290 PF03180 NLPA lipoprotein GD578_08295 PF00296 Luciferase-like monooxygenase GD578_08305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_08305 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GD578_08320 PF00528 Binding-protein-dependent transport system inner membrane component GD578_08325 PF00528 Binding-protein-dependent transport system inner membrane component GD578_08330 PF00005 ABC transporter GD578_08340 PF01037 Lrp/AsnC ligand binding domain GD578_08345 PF01709 Transcriptional regulator GD578_08405 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GD578_08415 PF00892 EamA-like transporter family GD578_08455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GD578_08455 PF02753 Pili assembly chaperone PapD, C-terminal domain GD578_08460 PF16970 Type-1 fimbrial protein, A GD578_08475 PF04055 Radical SAM superfamily GD578_08475 PF06968 Biotin and Thiamin Synthesis associated domain GD578_08480 PF08331 Domain of unknown function (DUF1730) GD578_08485 PF03853 YjeF-related protein N-terminus GD578_08485 PF01256 Carbohydrate kinase GD578_08490 PF02075 Crossover junction endodeoxyribonuclease RuvC GD578_08520 PF02773 S-adenosylmethionine synthetase, C-terminal domain GD578_08520 PF02772 S-adenosylmethionine synthetase, central domain GD578_08520 PF00438 S-adenosylmethionine synthetase, N-terminal domain GD578_08525 PF02780 Transketolase, C-terminal domain GD578_08525 PF02779 Transketolase, pyrimidine binding domain GD578_08525 PF00456 Transketolase, thiamine diphosphate binding domain GD578_08535 PF04264 YceI-like domain GD578_08545 PF09992 Phosphodiester glycosidase GD578_08555 PF05958 tRNA (Uracil-5-)-methyltransferase GD578_08560 PF04229 GrpB protein GD578_08565 PF00171 Aldehyde dehydrogenase family GD578_08565 PF01619 Proline dehydrogenase GD578_08565 PF14850 DNA-binding domain of Proline dehydrogenase GD578_08565 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GD578_08575 PF01037 Lrp/AsnC ligand binding domain GD578_08580 PF00474 Sodium:solute symporter family GD578_08585 PF02146 Sir2 family GD578_08590 PF01597 Glycine cleavage H-protein GD578_08595 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GD578_08595 PF12833 Helix-turn-helix domain GD578_08605 PF00005 ABC transporter GD578_08605 PF00664 ABC transporter transmembrane region GD578_08610 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GD578_08615 PF06912 Protein of unknown function (DUF1275) GD578_08620 PF00375 Sodium:dicarboxylate symporter family GD578_08635 PF08007 Cupin superfamily protein GD578_08640 PF02545 Maf-like protein GD578_08650 PF00162 Phosphoglycerate kinase GD578_08660 PF01116 Fructose-bisphosphate aldolase class-II GD578_08665 PF09312 SurA N-terminal domain GD578_08665 PF00639 PPIC-type PPIASE domain GD578_08670 PF04453 LPS transport system D GD578_08670 PF03968 OstA-like protein GD578_08675 PF01636 Phosphotransferase enzyme family GD578_08680 PF00483 Nucleotidyl transferase GD578_08685 PF02527 rRNA small subunit methyltransferase G GD578_08690 PF13614 AAA domain GD578_08695 PF17762 HTH domain found in ParB protein GD578_08695 PF02195 ParB-like nuclease domain GD578_08700 PF01618 MotA/TolQ/ExbB proton channel family GD578_08710 PF00664 ABC transporter transmembrane region GD578_08710 PF00005 ABC transporter GD578_08715 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GD578_08720 PF02348 Cytidylyltransferase GD578_08725 PF09115 DNA polymerase III, delta subunit, C terminal GD578_08735 PF01026 TatD related DNase GD578_08750 PF07963 Prokaryotic N-terminal methylation motif GD578_08750 PF02501 Type II secretion system (T2SS), protein I GD578_08755 PF11612 Type II secretion system (T2SS), protein J GD578_08755 PF07963 Prokaryotic N-terminal methylation motif GD578_08760 PF03934 Type II secretion system (T2SS), protein K GD578_08770 PF03167 Uracil DNA glycosylase superfamily GD578_08780 PF14437 MafB19-like deaminase GD578_08790 PF02224 Cytidylate kinase GD578_08795 PF00575 S1 RNA binding domain GD578_08800 PF00216 Bacterial DNA-binding protein GD578_08810 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GD578_08815 PF03956 Lysine exporter LysO GD578_08820 PF00743 Flavin-binding monooxygenase-like GD578_08830 PF03969 AFG1-like ATPase GD578_08835 PF01274 Malate synthase GD578_08845 PF02472 Biopolymer transport protein ExbD/TolR GD578_08850 PF02472 Biopolymer transport protein ExbD/TolR GD578_08855 PF01618 MotA/TolQ/ExbB proton channel family GD578_08860 PF03544 Gram-negative bacterial TonB protein C-terminal GD578_08865 PF00593 TonB dependent receptor GD578_08865 PF07715 TonB-dependent Receptor Plug Domain GD578_08885 PF01432 Peptidase family M3 GD578_08890 PF00528 Binding-protein-dependent transport system inner membrane component GD578_08895 PF00528 Binding-protein-dependent transport system inner membrane component GD578_08900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GD578_08900 PF00005 ABC transporter GD578_08915 PF00459 Inositol monophosphatase family GD578_08925 PF01649 Ribosomal protein S20 GD578_08930 PF13460 NAD(P)H-binding GD578_08935 PF03737 Aldolase/RraA GD578_08955 PF02559 CarD-like/TRCF domain GD578_08955 PF00270 DEAD/DEAH box helicase GD578_08955 PF03461 TRCF domain GD578_08955 PF00271 Helicase conserved C-terminal domain GD578_08955 PF17757 UvrB interaction domain GD578_08965 PF00211 Adenylate and Guanylate cyclase catalytic domain GD578_08970 PF00111 2Fe-2S iron-sulfur cluster binding domain GD578_08975 PF00012 Hsp70 protein GD578_08980 PF07743 HSCB C-terminal oligomerisation domain GD578_08980 PF00226 DnaJ domain GD578_08985 PF01521 Iron-sulphur cluster biosynthesis GD578_08990 PF01592 NifU-like N terminal domain GD578_08995 PF00266 Aminotransferase class-V GD578_09000 PF02082 Transcriptional regulator GD578_09015 PF00216 Bacterial DNA-binding protein GD578_09025 PF12833 Helix-turn-helix domain GD578_09025 PF12852 Cupin GD578_09030 PF00487 Fatty acid desaturase GD578_09035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_09035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_09035 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_09040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_09040 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_09040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_09045 PF03109 ABC1 family GD578_09055 PF04073 Aminoacyl-tRNA editing domain GD578_09075 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GD578_09080 PF02277 Phosphoribosyltransferase GD578_09085 PF00300 Histidine phosphatase superfamily (branch 1) GD578_09095 PF02654 Cobalamin-5-phosphate synthase GD578_09100 PF07715 TonB-dependent Receptor Plug Domain GD578_09100 PF00593 TonB dependent receptor GD578_09110 PF00793 DAHP synthetase I family GD578_09115 PF01925 Sulfite exporter TauE/SafE GD578_09135 PF07715 TonB-dependent Receptor Plug Domain GD578_09135 PF00593 TonB dependent receptor GD578_09140 PF02684 Lipid-A-disaccharide synthetase GD578_09150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD578_09155 PF00005 ABC transporter GD578_09190 PF01230 HIT domain GD578_09220 PF08241 Methyltransferase domain GD578_09230 PF01053 Cys/Met metabolism PLP-dependent enzyme GD578_09240 PF02575 YbaB/EbfC DNA-binding family GD578_09245 PF02132 RecR protein GD578_09245 PF13662 Toprim domain GD578_09250 PF01612 3'-5' exonuclease GD578_09250 PF00570 HRDC domain GD578_09270 PF05166 YcgL domain GD578_09280 PF01434 Peptidase family M41 GD578_09280 PF00004 ATPase family associated with various cellular activities (AAA) GD578_09280 PF17862 AAA+ lid domain GD578_09290 PF00291 Pyridoxal-phosphate dependent enzyme GD578_09295 PF05175 Methyltransferase small domain GD578_09300 PF01264 Chorismate synthase GD578_09305 PF00990 Diguanylate cyclase, GGDEF domain GD578_09305 PF08448 PAS fold GD578_09320 PF04055 Radical SAM superfamily GD578_09325 PF00676 Dehydrogenase E1 component GD578_09330 PF02779 Transketolase, pyrimidine binding domain GD578_09330 PF02780 Transketolase, C-terminal domain GD578_09335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GD578_09335 PF00364 Biotin-requiring enzyme GD578_09335 PF02817 e3 binding domain GD578_09340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GD578_09340 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_09345 PF00106 short chain dehydrogenase GD578_09350 PF08240 Alcohol dehydrogenase GroES-like domain GD578_09350 PF00107 Zinc-binding dehydrogenase GD578_09355 PF01062 Bestrophin, RFP-TM, chloride channel GD578_09360 PF00158 Sigma-54 interaction domain GD578_09360 PF02954 Bacterial regulatory protein, Fis family GD578_09360 PF00072 Response regulator receiver domain GD578_09365 PF04273 Putative phosphatase (DUF442) GD578_09365 PF00753 Metallo-beta-lactamase superfamily GD578_09370 PF04273 Putative phosphatase (DUF442) GD578_09370 PF00753 Metallo-beta-lactamase superfamily GD578_09375 PF01925 Sulfite exporter TauE/SafE GD578_09390 PF06445 GyrI-like small molecule binding domain GD578_09390 PF12833 Helix-turn-helix domain GD578_09415 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GD578_09420 PF00528 Binding-protein-dependent transport system inner membrane component GD578_09425 PF00005 ABC transporter GD578_09440 PF00083 Sugar (and other) transporter GD578_09445 PF07715 TonB-dependent Receptor Plug Domain GD578_09445 PF00593 TonB dependent receptor GD578_09450 PF00206 Lyase GD578_09450 PF10415 Fumarase C C-terminus GD578_09465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_09465 PF03466 LysR substrate binding domain GD578_09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_09470 PF03466 LysR substrate binding domain GD578_09475 PF00108 Thiolase, N-terminal domain GD578_09475 PF02803 Thiolase, C-terminal domain GD578_09480 PF02667 Short chain fatty acid transporter GD578_09485 PF01144 Coenzyme A transferase GD578_09490 PF01144 Coenzyme A transferase GD578_09495 PF03466 LysR substrate binding domain GD578_09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_09515 PF00440 Bacterial regulatory proteins, tetR family GD578_09560 PF06719 AraC-type transcriptional regulator N-terminus GD578_09560 PF12833 Helix-turn-helix domain GD578_09565 PF07690 Major Facilitator Superfamily GD578_09570 PF01738 Dienelactone hydrolase family GD578_09585 PF01613 Flavin reductase like domain GD578_09595 PF12833 Helix-turn-helix domain GD578_09595 PF14525 AraC-binding-like domain GD578_09600 PF00970 Oxidoreductase FAD-binding domain GD578_09600 PF00111 2Fe-2S iron-sulfur cluster binding domain GD578_09600 PF00175 Oxidoreductase NAD-binding domain GD578_09605 PF00866 Ring hydroxylating beta subunit GD578_09610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GD578_09610 PF00355 Rieske [2Fe-2S] domain GD578_09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_09615 PF03459 TOBE domain GD578_09625 PF00528 Binding-protein-dependent transport system inner membrane component GD578_09630 PF03459 TOBE domain GD578_09630 PF00005 ABC transporter GD578_09650 PF17837 4'-phosphopantetheinyl transferase N-terminal domain GD578_09650 PF01648 4'-phosphopantetheinyl transferase superfamily GD578_09655 PF05977 Transmembrane secretion effector GD578_09660 PF00975 Thioesterase domain GD578_09660 PF00668 Condensation domain GD578_09660 PF13193 AMP-binding enzyme C-terminal domain GD578_09660 PF00501 AMP-binding enzyme GD578_09660 PF00550 Phosphopantetheine attachment site GD578_09665 PF03621 MbtH-like protein GD578_09670 PF11806 Domain of unknown function (DUF3327) GD578_09670 PF00756 Putative esterase GD578_09675 PF00106 short chain dehydrogenase GD578_09680 PF00425 chorismate binding enzyme GD578_09685 PF00501 AMP-binding enzyme GD578_09685 PF13193 AMP-binding enzyme C-terminal domain GD578_09690 PF00550 Phosphopantetheine attachment site GD578_09690 PF00857 Isochorismatase family GD578_09695 PF00873 AcrB/AcrD/AcrF family GD578_09700 PF07715 TonB-dependent Receptor Plug Domain GD578_09700 PF00593 TonB dependent receptor GD578_09710 PF00149 Calcineurin-like phosphoesterase GD578_09715 PF13089 Polyphosphate kinase N-terminal domain GD578_09715 PF17941 Polyphosphate kinase C-terminal domain 1 GD578_09715 PF13090 Polyphosphate kinase C-terminal domain 2 GD578_09715 PF02503 Polyphosphate kinase middle domain GD578_09720 PF08042 PqqA family GD578_09725 PF12706 Beta-lactamase superfamily domain GD578_09730 PF03070 TENA/THI-4/PQQC family GD578_09735 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GD578_09740 PF04055 Radical SAM superfamily GD578_09740 PF13186 Iron-sulfur cluster-binding domain GD578_09745 PF01244 Membrane dipeptidase (Peptidase family M19) GD578_09765 PF13091 PLD-like domain GD578_09780 PF00199 Catalase GD578_09795 PF08240 Alcohol dehydrogenase GroES-like domain GD578_09795 PF00107 Zinc-binding dehydrogenase GD578_09810 PF00577 Outer membrane usher protein GD578_09810 PF13954 PapC N-terminal domain GD578_09810 PF13953 PapC C-terminal domain GD578_09815 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain GD578_09815 PF02753 Pili assembly chaperone PapD, C-terminal domain GD578_09820 PF16970 Type-1 fimbrial protein, A GD578_09830 PF02321 Outer membrane efflux protein GD578_09835 PF00873 AcrB/AcrD/AcrF family GD578_09840 PF00529 HlyD membrane-fusion protein of T1SS GD578_09840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD578_09845 PF00072 Response regulator receiver domain GD578_09845 PF00486 Transcriptional regulatory protein, C terminal GD578_09850 PF00512 His Kinase A (phospho-acceptor) domain GD578_09850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_09850 PF00672 HAMP domain GD578_09850 PF16527 Two-component sensor protein CpxA, periplasmic domain GD578_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_09855 PF03466 LysR substrate binding domain GD578_09890 PF13673 Acetyltransferase (GNAT) domain GD578_09935 PF16295 Tetracyclin repressor-like, C-terminal domain GD578_09935 PF00440 Bacterial regulatory proteins, tetR family GD578_09950 PF00440 Bacterial regulatory proteins, tetR family GD578_09950 PF08359 YsiA-like protein, C-terminal region GD578_09955 PF12706 Beta-lactamase superfamily domain GD578_09965 PF13411 MerR HTH family regulatory protein GD578_09975 PF01872 RibD C-terminal domain GD578_09980 PF00106 short chain dehydrogenase GD578_09985 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_09985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GD578_09990 PF00561 alpha/beta hydrolase fold GD578_10000 PF00171 Aldehyde dehydrogenase family GD578_10010 PF07690 Major Facilitator Superfamily GD578_10015 PF00920 Dehydratase family GD578_10020 PF07729 FCD domain GD578_10020 PF00392 Bacterial regulatory proteins, gntR family GD578_10030 PF03466 LysR substrate binding domain GD578_10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_10035 PF13378 Enolase C-terminal domain-like GD578_10035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GD578_10040 PF02426 Muconolactone delta-isomerase GD578_10045 PF04444 Catechol dioxygenase N terminus GD578_10045 PF00775 Dioxygenase GD578_10050 PF01144 Coenzyme A transferase GD578_10055 PF01144 Coenzyme A transferase GD578_10065 PF00108 Thiolase, N-terminal domain GD578_10065 PF02803 Thiolase, C-terminal domain GD578_10070 PF12146 Serine aminopeptidase, S33 GD578_10075 PF00171 Aldehyde dehydrogenase family GD578_10095 PF01613 Flavin reductase like domain GD578_10100 PF00175 Oxidoreductase NAD-binding domain GD578_10100 PF00111 2Fe-2S iron-sulfur cluster binding domain GD578_10115 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GD578_10115 PF00355 Rieske [2Fe-2S] domain GD578_10130 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GD578_10135 PF01425 Amidase GD578_10145 PF07690 Major Facilitator Superfamily GD578_10155 PF00106 short chain dehydrogenase GD578_10170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_10170 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_10170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_10175 PF03466 LysR substrate binding domain GD578_10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_10180 PF01614 Bacterial transcriptional regulator GD578_10180 PF09339 IclR helix-turn-helix domain GD578_10185 PF00753 Metallo-beta-lactamase superfamily GD578_10195 PF04143 Sulphur transport GD578_10205 PF13360 PQQ-like domain GD578_10205 PF01011 PQQ enzyme repeat GD578_10210 PF04966 Carbohydrate-selective porin, OprB family GD578_10215 PF05048 Periplasmic copper-binding protein (NosD) GD578_10220 PF01487 Type I 3-dehydroquinase GD578_10225 PF00775 Dioxygenase GD578_10230 PF00775 Dioxygenase GD578_10230 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal GD578_10235 PF02627 Carboxymuconolactone decarboxylase family GD578_10240 PF07690 Major Facilitator Superfamily GD578_10245 PF00561 alpha/beta hydrolase fold GD578_10250 PF00206 Lyase GD578_10250 PF10397 Adenylosuccinate lyase C-terminus GD578_10255 PF00108 Thiolase, N-terminal domain GD578_10255 PF02803 Thiolase, C-terminal domain GD578_10260 PF01144 Coenzyme A transferase GD578_10265 PF01144 Coenzyme A transferase GD578_10270 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GD578_10275 PF04977 Septum formation initiator GD578_10285 PF04239 Protein of unknown function (DUF421) GD578_10290 PF00113 Enolase, C-terminal TIM barrel domain GD578_10290 PF03952 Enolase, N-terminal domain GD578_10295 PF00793 DAHP synthetase I family GD578_10300 PF06418 CTP synthase N-terminus GD578_10300 PF00117 Glutamine amidotransferase class-I GD578_10325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GD578_10325 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_10340 PF00793 DAHP synthetase I family GD578_10345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GD578_10350 PF02861 Clp amino terminal domain, pathogenicity island component GD578_10350 PF00004 ATPase family associated with various cellular activities (AAA) GD578_10350 PF07724 AAA domain (Cdc48 subfamily) GD578_10350 PF17871 AAA lid domain GD578_10350 PF10431 C-terminal, D2-small domain, of ClpB protein GD578_10355 PF02617 ATP-dependent Clp protease adaptor protein ClpS GD578_10365 PF02774 Semialdehyde dehydrogenase, dimerisation domain GD578_10365 PF01118 Semialdehyde dehydrogenase, NAD binding domain GD578_10380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GD578_10385 PF00585 C-terminal regulatory domain of Threonine dehydratase GD578_10385 PF00291 Pyridoxal-phosphate dependent enzyme GD578_10390 PF02254 TrkA-N domain GD578_10390 PF02080 TrkA-C domain GD578_10395 PF02386 Cation transport protein GD578_10400 PF02253 Phospholipase A1 GD578_10405 PF08367 Peptidase M16C associated GD578_10405 PF00675 Insulinase (Peptidase family M16) GD578_10405 PF05193 Peptidase M16 inactive domain GD578_10410 PF07715 TonB-dependent Receptor Plug Domain GD578_10410 PF00593 TonB dependent receptor GD578_10415 PF00294 pfkB family carbohydrate kinase GD578_10425 PF07290 Protein of unknown function (DUF1449) GD578_10435 PF01654 Cytochrome bd terminal oxidase subunit I GD578_10440 PF02322 Cytochrome bd terminal oxidase subunit II GD578_10445 PF08173 Membrane bound YbgT-like protein GD578_10460 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GD578_10470 PF00448 SRP54-type protein, GTPase domain GD578_10470 PF02881 SRP54-type protein, helical bundle domain GD578_10500 PF00571 CBS domain GD578_10500 PF01380 SIS domain GD578_10505 PF00202 Aminotransferase class-III GD578_10510 PF00462 Glutaredoxin GD578_10520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_10520 PF03466 LysR substrate binding domain GD578_10525 PF00557 Metallopeptidase family M24 GD578_10530 PF05525 Branched-chain amino acid transport protein GD578_10555 PF05524 PEP-utilising enzyme, N-terminal GD578_10555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GD578_10555 PF02896 PEP-utilising enzyme, TIM barrel domain GD578_10555 PF00391 PEP-utilising enzyme, mobile domain GD578_10555 PF00381 PTS HPr component phosphorylation site GD578_10560 PF00294 pfkB family carbohydrate kinase GD578_10565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GD578_10565 PF02378 Phosphotransferase system, EIIC GD578_10585 PF00990 Diguanylate cyclase, GGDEF domain GD578_10585 PF00563 EAL domain GD578_10585 PF03707 Bacterial signalling protein N terminal repeat GD578_10595 PF07995 Glucose / Sorbosone dehydrogenase GD578_10600 PF02586 SOS response associated peptidase (SRAP) GD578_10605 PF01740 STAS domain GD578_10605 PF00916 Sulfate permease family GD578_10610 PF05922 Peptidase inhibitor I9 GD578_10610 PF00082 Subtilase family GD578_10620 PF00324 Amino acid permease GD578_10625 PF00266 Aminotransferase class-V GD578_10630 PF01037 Lrp/AsnC ligand binding domain GD578_10650 PF13419 Haloacid dehalogenase-like hydrolase GD578_10655 PF01479 S4 domain GD578_10660 PF00154 recA bacterial DNA recombination protein GD578_10665 PF02631 RecX family GD578_10680 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_10680 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GD578_10685 PF07977 FabA-like domain GD578_10690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GD578_10690 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_10700 PF01103 Surface antigen GD578_10700 PF07244 Surface antigen variable number repeat GD578_10705 PF13180 PDZ domain GD578_10705 PF17820 PDZ domain GD578_10705 PF02163 Peptidase family M50 GD578_10710 PF13288 DXP reductoisomerase C-terminal domain GD578_10710 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GD578_10710 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GD578_10720 PF01255 Putative undecaprenyl diphosphate synthase GD578_10725 PF01765 Ribosome recycling factor GD578_10730 PF00696 Amino acid kinase family GD578_10735 PF04055 Radical SAM superfamily GD578_10735 PF00919 Uncharacterized protein family UPF0004 GD578_10735 PF18693 TRAM domain GD578_10745 PF00989 PAS fold GD578_10745 PF00512 His Kinase A (phospho-acceptor) domain GD578_10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_10750 PF00072 Response regulator receiver domain GD578_10750 PF02954 Bacterial regulatory protein, Fis family GD578_10750 PF00158 Sigma-54 interaction domain GD578_10755 PF00440 Bacterial regulatory proteins, tetR family GD578_10760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GD578_10760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GD578_10770 PF02542 YgbB family GD578_10780 PF01266 FAD dependent oxidoreductase GD578_10805 PF10415 Fumarase C C-terminus GD578_10805 PF00206 Lyase GD578_10810 PF16363 GDP-mannose 4,6 dehydratase GD578_10815 PF02635 DsrE/DsrF-like family GD578_10835 PF00892 EamA-like transporter family GD578_10840 PF00392 Bacterial regulatory proteins, gntR family GD578_10840 PF00155 Aminotransferase class I and II GD578_10845 PF01638 HxlR-like helix-turn-helix GD578_10850 PF03454 MoeA C-terminal region (domain IV) GD578_10850 PF00994 Probable molybdopterin binding domain GD578_10850 PF03453 MoeA N-terminal region (domain I and II) GD578_10855 PF00994 Probable molybdopterin binding domain GD578_10855 PF01967 MoaC family GD578_10860 PF02391 MoaE protein GD578_10870 PF06463 Molybdenum Cofactor Synthesis C GD578_10870 PF04055 Radical SAM superfamily GD578_10875 PF01568 Molydopterin dinucleotide binding domain GD578_10875 PF00384 Molybdopterin oxidoreductase GD578_10875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GD578_10880 PF12804 MobA-like NTP transferase domain GD578_10885 PF04324 BFD-like [2Fe-2S] binding domain GD578_10885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GD578_10885 PF00384 Molybdopterin oxidoreductase GD578_10885 PF01568 Molydopterin dinucleotide binding domain GD578_10890 PF04324 BFD-like [2Fe-2S] binding domain GD578_10890 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GD578_10890 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GD578_10890 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_10890 PF18267 Rubredoxin NAD+ reductase C-terminal domain GD578_10895 PF13806 Rieske-like [2Fe-2S] domain GD578_10895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GD578_10895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GD578_10895 PF18267 Rubredoxin NAD+ reductase C-terminal domain GD578_10895 PF04324 BFD-like [2Fe-2S] binding domain GD578_10895 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_10905 PF00072 Response regulator receiver domain GD578_10905 PF00486 Transcriptional regulatory protein, C terminal GD578_10910 PF00005 ABC transporter GD578_10920 PF00817 impB/mucB/samB family GD578_10920 PF11799 impB/mucB/samB family C-terminal domain GD578_10920 PF13438 Domain of unknown function (DUF4113) GD578_10925 PF01220 Dehydroquinase class II GD578_10930 PF00364 Biotin-requiring enzyme GD578_10935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GD578_10935 PF02785 Biotin carboxylase C-terminal domain GD578_10935 PF00289 Biotin carboxylase, N-terminal domain GD578_10945 PF12832 MFS_1 like family GD578_10960 PF13953 PapC C-terminal domain GD578_10960 PF13954 PapC N-terminal domain GD578_10960 PF00577 Outer membrane usher protein GD578_10980 PF01645 Conserved region in glutamate synthase GD578_11005 PF01565 FAD binding domain GD578_11005 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GD578_11010 PF01451 Low molecular weight phosphotyrosine protein phosphatase GD578_11020 PF01638 HxlR-like helix-turn-helix GD578_11025 PF00857 Isochorismatase family GD578_11035 PF00465 Iron-containing alcohol dehydrogenase GD578_11040 PF03061 Thioesterase superfamily GD578_11045 PF05506 Domain of unknown function (DUF756) GD578_11045 PF04185 Phosphoesterase family GD578_11050 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GD578_11050 PF12170 DNA polymerase III tau subunit V interacting with alpha GD578_11050 PF12169 DNA polymerase III subunits gamma and tau domain III GD578_11065 PF07690 Major Facilitator Superfamily GD578_11090 PF02803 Thiolase, C-terminal domain GD578_11090 PF00108 Thiolase, N-terminal domain GD578_11100 PF03466 LysR substrate binding domain GD578_11100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_11105 PF13202 EF hand GD578_11105 PF00923 Transaldolase/Fructose-6-phosphate aldolase GD578_11110 PF01810 LysE type translocator GD578_11115 PF01037 Lrp/AsnC ligand binding domain GD578_11120 PF03594 Benzoate membrane transport protein GD578_11125 PF02308 MgtC family GD578_11130 PF00689 Cation transporting ATPase, C-terminus GD578_11130 PF00690 Cation transporter/ATPase, N-terminus GD578_11145 PF00582 Universal stress protein family GD578_11150 PF16326 ABC transporter C-terminal domain GD578_11150 PF00005 ABC transporter GD578_11150 PF12848 ABC transporter GD578_11195 PF00924 Mechanosensitive ion channel GD578_11200 PF00291 Pyridoxal-phosphate dependent enzyme GD578_11205 PF02423 Ornithine cyclodeaminase/mu-crystallin family GD578_11210 PF06276 Ferric iron reductase FhuF-like transporter GD578_11210 PF04183 IucA / IucC family GD578_11215 PF07690 Major Facilitator Superfamily GD578_11220 PF04183 IucA / IucC family GD578_11220 PF06276 Ferric iron reductase FhuF-like transporter GD578_11225 PF03328 HpcH/HpaI aldolase/citrate lyase family GD578_11230 PF00593 TonB dependent receptor GD578_11230 PF07715 TonB-dependent Receptor Plug Domain GD578_11250 PF01037 Lrp/AsnC ligand binding domain GD578_11255 PF01817 Chorismate mutase type II GD578_11295 PF13953 PapC C-terminal domain GD578_11295 PF13954 PapC N-terminal domain GD578_11295 PF00577 Outer membrane usher protein GD578_11310 PF11940 Domain of unknown function (DUF3458) Ig-like fold GD578_11310 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GD578_11310 PF01433 Peptidase family M1 domain GD578_11325 PF02110 Hydroxyethylthiazole kinase family GD578_11330 PF06445 GyrI-like small molecule binding domain GD578_11340 PF05970 PIF1-like helicase GD578_11340 PF14493 Helix-turn-helix domain GD578_11345 PF00465 Iron-containing alcohol dehydrogenase GD578_11360 PF00171 Aldehyde dehydrogenase family GD578_11365 PF13520 Amino acid permease GD578_11370 PF06751 Ethanolamine ammonia lyase large subunit (EutB) GD578_11375 PF05985 Ethanolamine ammonia-lyase light chain (EutC) GD578_11380 PF00117 Glutamine amidotransferase class-I GD578_11380 PF02540 NAD synthase GD578_11380 PF00958 GMP synthase C terminal domain GD578_11385 PF00749 tRNA synthetases class I (E and Q), catalytic domain GD578_11385 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GD578_11390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GD578_11395 PF00149 Calcineurin-like phosphoesterase GD578_11405 PF00881 Nitroreductase family GD578_11415 PF17209 Hfq protein GD578_11425 PF01119 DNA mismatch repair protein, C-terminal domain GD578_11425 PF08676 MutL C terminal dimerisation domain GD578_11430 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GD578_11435 PF00849 RNA pseudouridylate synthase GD578_11435 PF01479 S4 domain GD578_11450 PF00849 RNA pseudouridylate synthase GD578_11450 PF01479 S4 domain GD578_11460 PF04284 Protein of unknown function (DUF441) GD578_11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_11465 PF03466 LysR substrate binding domain GD578_11475 PF07690 Major Facilitator Superfamily GD578_11480 PF00027 Cyclic nucleotide-binding domain GD578_11480 PF00520 Ion transport protein GD578_11490 PF06434 Aconitate hydratase 2 N-terminus GD578_11490 PF00330 Aconitase family (aconitate hydratase) GD578_11490 PF11791 Aconitate B N-terminal domain GD578_11505 PF00717 Peptidase S24-like GD578_11510 PF13438 Domain of unknown function (DUF4113) GD578_11510 PF00817 impB/mucB/samB family GD578_11510 PF11799 impB/mucB/samB family C-terminal domain GD578_11510 PF11798 IMS family HHH motif GD578_11580 PF02768 DNA polymerase III beta subunit, C-terminal domain GD578_11580 PF02767 DNA polymerase III beta subunit, central domain GD578_11580 PF00712 DNA polymerase III beta subunit, N-terminal domain GD578_11795 PF01695 IstB-like ATP binding protein GD578_11805 PF00145 C-5 cytosine-specific DNA methylase GD578_11850 PF01381 Helix-turn-helix GD578_11850 PF00717 Peptidase S24-like GD578_11885 PF00929 Exonuclease GD578_11925 PF01103 Surface antigen GD578_11925 PF07244 Surface antigen variable number repeat GD578_11925 PF17243 POTRA domain TamA domain 1 GD578_11930 PF07690 Major Facilitator Superfamily GD578_11935 PF03232 Ubiquinone biosynthesis protein COQ7 GD578_11945 PF00120 Glutamine synthetase, catalytic domain GD578_11950 PF00486 Transcriptional regulatory protein, C terminal GD578_11950 PF00072 Response regulator receiver domain GD578_11955 PF13493 Domain of unknown function (DUF4118) GD578_11955 PF00512 His Kinase A (phospho-acceptor) domain GD578_11955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_11955 PF02702 Osmosensitive K+ channel His kinase sensor domain GD578_11960 PF02669 K+-transporting ATPase, c chain GD578_11970 PF03814 Potassium-transporting ATPase A subunit GD578_11985 PF03109 ABC1 family GD578_11990 PF00899 ThiF family GD578_11995 PF01613 Flavin reductase like domain GD578_12000 PF13193 AMP-binding enzyme C-terminal domain GD578_12000 PF00501 AMP-binding enzyme GD578_12005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_12005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_12005 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_12010 PF00106 short chain dehydrogenase GD578_12015 PF12833 Helix-turn-helix domain GD578_12020 PF09084 NMT1/THI5 like GD578_12025 PF00528 Binding-protein-dependent transport system inner membrane component GD578_12030 PF13847 Methyltransferase domain GD578_12030 PF17827 PrmC N-terminal domain GD578_12035 PF00472 RF-1 domain GD578_12035 PF03462 PCRF domain GD578_12055 PF00296 Luciferase-like monooxygenase GD578_12065 PF13994 PgaD-like protein GD578_12070 PF00535 Glycosyl transferase family 2 GD578_12075 PF01522 Polysaccharide deacetylase GD578_12075 PF14883 Hypothetical glycosyl hydrolase family 13 GD578_12085 PF03618 Kinase/pyrophosphorylase GD578_12090 PF00391 PEP-utilising enzyme, mobile domain GD578_12090 PF02896 PEP-utilising enzyme, TIM barrel domain GD578_12090 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GD578_12100 PF06481 COX Aromatic Rich Motif GD578_12100 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GD578_12105 PF00115 Cytochrome C and Quinol oxidase polypeptide I GD578_12110 PF00510 Cytochrome c oxidase subunit III GD578_12115 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GD578_12120 PF01040 UbiA prenyltransferase family GD578_12125 PF01250 Ribosomal protein S6 GD578_12130 PF01084 Ribosomal protein S18 GD578_12135 PF03948 Ribosomal protein L9, C-terminal domain GD578_12135 PF01281 Ribosomal protein L9, N-terminal domain GD578_12140 PF03796 DnaB-like helicase C terminal domain GD578_12140 PF00772 DnaB-like helicase N terminal domain GD578_12145 PF01168 Alanine racemase, N-terminal domain GD578_12145 PF00842 Alanine racemase, C-terminal domain GD578_12155 PF01841 Transglutaminase-like superfamily GD578_12155 PF08379 Bacterial transglutaminase-like N-terminal region GD578_12165 PF14403 Circularly permuted ATP-grasp type 2 GD578_12175 PF13932 GidA associated domain GD578_12175 PF01134 Glucose inhibited division protein A GD578_12195 PF02954 Bacterial regulatory protein, Fis family GD578_12200 PF01808 AICARFT/IMPCHase bienzyme GD578_12200 PF02142 MGS-like domain GD578_12205 PF02844 Phosphoribosylglycinamide synthetase, N domain GD578_12205 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GD578_12205 PF02843 Phosphoribosylglycinamide synthetase, C domain GD578_12215 PF03180 NLPA lipoprotein GD578_12220 PF00005 ABC transporter GD578_12220 PF09383 NIL domain GD578_12225 PF00528 Binding-protein-dependent transport system inner membrane component GD578_12230 PF16123 Hydroxyacylglutathione hydrolase C-terminus GD578_12230 PF00753 Metallo-beta-lactamase superfamily GD578_12240 PF00375 Sodium:dicarboxylate symporter family GD578_12260 PF07995 Glucose / Sorbosone dehydrogenase GD578_12265 PF00892 EamA-like transporter family GD578_12285 PF00072 Response regulator receiver domain GD578_12285 PF00486 Transcriptional regulatory protein, C terminal GD578_12295 PF08521 Two-component sensor kinase N-terminal GD578_12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_12295 PF00512 His Kinase A (phospho-acceptor) domain GD578_12335 PF00512 His Kinase A (phospho-acceptor) domain GD578_12335 PF00672 HAMP domain GD578_12335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_12340 PF00486 Transcriptional regulatory protein, C terminal GD578_12340 PF00072 Response regulator receiver domain GD578_12350 PF00576 HIUase/Transthyretin family GD578_12360 PF02470 MlaD protein GD578_12365 PF04403 Paraquat-inducible protein A GD578_12380 PF06826 Predicted Permease Membrane Region GD578_12380 PF02080 TrkA-C domain GD578_12385 PF00155 Aminotransferase class I and II GD578_12405 PF12833 Helix-turn-helix domain GD578_12405 PF06719 AraC-type transcriptional regulator N-terminus GD578_12465 PF00149 Calcineurin-like phosphoesterase GD578_12475 PF00392 Bacterial regulatory proteins, gntR family GD578_12475 PF07729 FCD domain GD578_12485 PF02254 TrkA-N domain GD578_12485 PF00999 Sodium/hydrogen exchanger family GD578_12490 PF03616 Sodium/glutamate symporter GD578_12495 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GD578_12495 PF12833 Helix-turn-helix domain GD578_12500 PF01370 NAD dependent epimerase/dehydratase family GD578_12510 PF00561 alpha/beta hydrolase fold GD578_12515 PF00743 Flavin-binding monooxygenase-like GD578_12525 PF03466 LysR substrate binding domain GD578_12525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_12530 PF00857 Isochorismatase family GD578_12565 PF00561 alpha/beta hydrolase fold GD578_12580 PF04076 Bacterial OB fold (BOF) protein GD578_12590 PF13649 Methyltransferase domain GD578_12625 PF00171 Aldehyde dehydrogenase family GD578_12630 PF00202 Aminotransferase class-III GD578_12635 PF03466 LysR substrate binding domain GD578_12635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_12680 PF13332 Hemagglutinin repeat GD578_12680 PF05860 haemagglutination activity domain GD578_12680 PF04829 Pre-toxin domain with VENN motif GD578_12680 PF13018 Extended Signal Peptide of Type V secretion system GD578_12680 PF13332 Hemagglutinin repeat GD578_12680 PF05860 haemagglutination activity domain GD578_12680 PF04829 Pre-toxin domain with VENN motif GD578_12680 PF13018 Extended Signal Peptide of Type V secretion system GD578_12710 PF03793 PASTA domain GD578_12710 PF00069 Protein kinase domain GD578_12730 PF00814 Glycoprotease family GD578_12735 PF01165 Ribosomal protein S21 GD578_12740 PF09424 Yqey-like protein GD578_12745 PF01435 Peptidase family M48 GD578_12750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GD578_12750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GD578_12765 PF00156 Phosphoribosyl transferase domain GD578_12770 PF02674 Colicin V production protein GD578_12775 PF01180 Dihydroorotate dehydrogenase GD578_12795 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GD578_12795 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GD578_12800 PF00881 Nitroreductase family GD578_12810 PF00270 DEAD/DEAH box helicase GD578_12810 PF00271 Helicase conserved C-terminal domain GD578_12815 PF00313 'Cold-shock' DNA-binding domain GD578_12825 PF04545 Sigma-70, region 4 GD578_12825 PF04542 Sigma-70 region 2 GD578_12825 PF00140 Sigma-70 factor, region 1.2 GD578_12830 PF04241 Protein of unknown function (DUF423) GD578_12840 PF05690 Thiazole biosynthesis protein ThiG GD578_12845 PF03883 Peroxide stress protein YaaA GD578_12855 PF00753 Metallo-beta-lactamase superfamily GD578_12860 PF07687 Peptidase dimerisation domain GD578_12860 PF01546 Peptidase family M20/M25/M40 GD578_12865 PF03781 Sulfatase-modifying factor enzyme 1 GD578_12875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GD578_12880 PF01817 Chorismate mutase type II GD578_12880 PF01842 ACT domain GD578_12880 PF00800 Prephenate dehydratase GD578_12895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_12895 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_12895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_12900 PF00375 Sodium:dicarboxylate symporter family GD578_12910 PF00591 Glycosyl transferase family, a/b domain GD578_12910 PF02885 Glycosyl transferase family, helical bundle domain GD578_12915 PF07023 Protein of unknown function (DUF1315) GD578_12920 PF01513 ATP-NAD kinase GD578_12925 PF00905 Penicillin binding protein transpeptidase domain GD578_12925 PF14814 Bifunctional transglycosylase second domain GD578_12925 PF00912 Transglycosylase GD578_12935 PF00293 NUDIX domain GD578_12945 PF08521 Two-component sensor kinase N-terminal GD578_12945 PF00512 His Kinase A (phospho-acceptor) domain GD578_12945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_12950 PF00072 Response regulator receiver domain GD578_12950 PF00486 Transcriptional regulatory protein, C terminal GD578_12955 PF04076 Bacterial OB fold (BOF) protein GD578_12960 PF00437 Type II/IV secretion system protein GD578_12970 PF18389 TrmO C-terminal domain GD578_12970 PF01980 tRNA-methyltransferase O GD578_12975 PF00970 Oxidoreductase FAD-binding domain GD578_12975 PF00175 Oxidoreductase NAD-binding domain GD578_12980 PF02567 Phenazine biosynthesis-like protein GD578_12985 PF00155 Aminotransferase class I and II GD578_12985 PF00392 Bacterial regulatory proteins, gntR family GD578_12995 PF12838 4Fe-4S dicluster domain GD578_13000 PF00893 Small Multidrug Resistance protein GD578_13005 PF00005 ABC transporter GD578_13010 PF00528 Binding-protein-dependent transport system inner membrane component GD578_13015 PF00528 Binding-protein-dependent transport system inner membrane component GD578_13020 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD578_13025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_13025 PF03466 LysR substrate binding domain GD578_13030 PF13533 Biotin-lipoyl like GD578_13035 PF00873 AcrB/AcrD/AcrF family GD578_13040 PF02321 Outer membrane efflux protein GD578_13045 PF00464 Serine hydroxymethyltransferase GD578_13205 PF10549 ORF11CD3 domain GD578_13205 PF09669 Phage regulatory protein Rha (Phage_pRha) GD578_13280 PF04607 Region found in RelA / SpoT proteins GD578_13340 PF03796 DnaB-like helicase C terminal domain GD578_13340 PF00772 DnaB-like helicase N terminal domain GD578_13425 PF00589 Phage integrase family GD578_13430 PF00005 ABC transporter GD578_13435 PF01061 ABC-2 type transporter GD578_13440 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GD578_13440 PF14489 QueF-like protein GD578_13450 PF01098 Cell cycle protein GD578_13455 PF13406 Transglycosylase SLT domain GD578_13460 PF05036 Sporulation related domain GD578_13460 PF03330 Lytic transglycolase GD578_13480 PF12833 Helix-turn-helix domain GD578_13490 PF00889 Elongation factor TS GD578_13495 PF00318 Ribosomal protein S2 GD578_13500 PF00557 Metallopeptidase family M24 GD578_13510 PF07690 Major Facilitator Superfamily GD578_13520 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_13520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GD578_13525 PF04055 Radical SAM superfamily GD578_13530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_13530 PF09317 Domain of unknown function (DUF1974) GD578_13530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_13545 PF05221 S-adenosyl-L-homocysteine hydrolase GD578_13545 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GD578_13550 PF02219 Methylenetetrahydrofolate reductase GD578_13555 PF04452 RNA methyltransferase GD578_13560 PF00563 EAL domain GD578_13560 PF00990 Diguanylate cyclase, GGDEF domain GD578_13560 PF03707 Bacterial signalling protein N terminal repeat GD578_13565 PF00390 Malic enzyme, N-terminal domain GD578_13565 PF03949 Malic enzyme, NAD binding domain GD578_13565 PF01515 Phosphate acetyl/butaryl transferase GD578_13570 PF12627 Probable RNA and SrmB- binding site of polymerase A GD578_13570 PF01743 Poly A polymerase head domain GD578_13575 PF13180 PDZ domain GD578_13580 PF01784 NIF3 (NGG1p interacting factor 3) GD578_13585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GD578_13585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GD578_13620 PF01040 UbiA prenyltransferase family GD578_13625 PF04345 Chorismate lyase GD578_13635 PF00854 POT family GD578_13650 PF13539 D-alanyl-D-alanine carboxypeptidase GD578_13675 PF00117 Glutamine amidotransferase class-I GD578_13680 PF11838 ERAP1-like C-terminal domain GD578_13680 PF01433 Peptidase family M1 domain GD578_13685 PF07715 TonB-dependent Receptor Plug Domain GD578_13685 PF00593 TonB dependent receptor GD578_13690 PF00591 Glycosyl transferase family, a/b domain GD578_13690 PF02885 Glycosyl transferase family, helical bundle domain GD578_13695 PF00218 Indole-3-glycerol phosphate synthase GD578_13700 PF01713 Smr domain GD578_13710 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GD578_13710 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GD578_13715 PF00111 2Fe-2S iron-sulfur cluster binding domain GD578_13715 PF01799 [2Fe-2S] binding domain GD578_13725 PF00144 Beta-lactamase GD578_13740 PF05675 Protein of unknown function (DUF817) GD578_13745 PF01208 Uroporphyrinogen decarboxylase (URO-D) GD578_13760 PF17954 Quercetinase C-terminal cupin domain GD578_13760 PF02678 Pirin GD578_13765 PF13309 HTH domain GD578_13765 PF08348 YheO-like PAS domain GD578_13770 PF00291 Pyridoxal-phosphate dependent enzyme GD578_13790 PF02705 K+ potassium transporter GD578_13800 PF04328 Selenoprotein, putative GD578_13805 PF02554 Carbon starvation protein CstA GD578_13805 PF13722 5TM C-terminal transporter carbon starvation CstA GD578_13810 PF08207 Elongation factor P (EF-P) KOW-like domain GD578_13810 PF09285 Elongation factor P, C-terminal GD578_13810 PF01132 Elongation factor P (EF-P) OB domain GD578_13815 PF04055 Radical SAM superfamily GD578_13825 PF00563 EAL domain GD578_13825 PF12792 CSS motif domain associated with EAL GD578_13830 PF01197 Ribosomal protein L31 GD578_13835 PF13593 SBF-like CPA transporter family (DUF4137) GD578_13840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GD578_13845 PF07690 Major Facilitator Superfamily GD578_13850 PF13654 AAA domain GD578_13850 PF05362 Lon protease (S16) C-terminal proteolytic domain GD578_13855 PF03466 LysR substrate binding domain GD578_13855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_13860 PF01476 LysM domain GD578_13860 PF01551 Peptidase family M23 GD578_13865 PF01975 Survival protein SurE GD578_13880 PF07943 Penicillin-binding protein 5, C-terminal domain GD578_13880 PF00768 D-alanyl-D-alanine carboxypeptidase GD578_13885 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_13890 PF00293 NUDIX domain GD578_13900 PF04356 Protein of unknown function (DUF489) GD578_13905 PF00206 Lyase GD578_13905 PF08328 Adenylosuccinate lyase C-terminal GD578_13910 PF09997 Predicted membrane protein (DUF2238) GD578_13925 PF08496 Peptidase family S49 N-terminal GD578_13925 PF01343 Peptidase family S49 GD578_13930 PF00005 ABC transporter GD578_13935 PF00528 Binding-protein-dependent transport system inner membrane component GD578_13940 PF00528 Binding-protein-dependent transport system inner membrane component GD578_13945 PF12849 PBP superfamily domain GD578_13950 PF00324 Amino acid permease GD578_13955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GD578_13955 PF00205 Thiamine pyrophosphate enzyme, central domain GD578_13955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD578_13960 PF01037 Lrp/AsnC ligand binding domain GD578_13965 PF00171 Aldehyde dehydrogenase family GD578_13970 PF00282 Pyridoxal-dependent decarboxylase conserved domain GD578_13975 PF00202 Aminotransferase class-III GD578_13995 PF00487 Fatty acid desaturase GD578_14000 PF00111 2Fe-2S iron-sulfur cluster binding domain GD578_14000 PF00970 Oxidoreductase FAD-binding domain GD578_14000 PF00175 Oxidoreductase NAD-binding domain GD578_14005 PF00440 Bacterial regulatory proteins, tetR family GD578_14015 PF12137 RNA polymerase recycling family C-terminal GD578_14015 PF18337 RapA N-terminal Tudor like domain GD578_14015 PF00176 SNF2 family N-terminal domain GD578_14015 PF00271 Helicase conserved C-terminal domain GD578_14015 PF18339 RapA N-terminal Tudor like domain 1 GD578_14020 PF00849 RNA pseudouridylate synthase GD578_14030 PF00202 Aminotransferase class-III GD578_14035 PF02581 Thiamine monophosphate synthase GD578_14060 PF00675 Insulinase (Peptidase family M16) GD578_14060 PF05193 Peptidase M16 inactive domain GD578_14065 PF02567 Phenazine biosynthesis-like protein GD578_14075 PF03466 LysR substrate binding domain GD578_14075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_14080 PF06779 Uncharacterised MFS-type transporter YbfB GD578_14100 PF00180 Isocitrate/isopropylmalate dehydrogenase GD578_14105 PF00849 RNA pseudouridylate synthase GD578_14110 PF03971 Monomeric isocitrate dehydrogenase GD578_14120 PF00768 D-alanyl-D-alanine carboxypeptidase GD578_14120 PF07943 Penicillin-binding protein 5, C-terminal domain GD578_14125 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_14130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GD578_14135 PF00875 DNA photolyase GD578_14135 PF03441 FAD binding domain of DNA photolyase GD578_14165 PF02350 UDP-N-acetylglucosamine 2-epimerase GD578_14180 PF03060 Nitronate monooxygenase GD578_14185 PF01207 Dihydrouridine synthase (Dus) GD578_14190 PF07759 Protein of unknown function (DUF1615) GD578_14200 PF01472 PUA domain GD578_14200 PF00696 Amino acid kinase family GD578_14205 PF01926 50S ribosome-binding GTPase GD578_14205 PF01018 GTP1/OBG GD578_14220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GD578_14220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GD578_14235 PF17757 UvrB interaction domain GD578_14235 PF02151 UvrB/uvrC motif GD578_14235 PF00271 Helicase conserved C-terminal domain GD578_14235 PF04851 Type III restriction enzyme, res subunit GD578_14235 PF12344 Ultra-violet resistance protein B GD578_14245 PF17151 Periplasmic sensor domain GD578_14245 PF00990 Diguanylate cyclase, GGDEF domain GD578_14285 PF00106 short chain dehydrogenase GD578_14290 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GD578_14295 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GD578_14300 PF02565 Recombination protein O C terminal GD578_14300 PF11967 Recombination protein O N terminal GD578_14310 PF07650 KH domain GD578_14310 PF01926 50S ribosome-binding GTPase GD578_14315 PF00035 Double-stranded RNA binding motif GD578_14315 PF14622 Ribonuclease-III-like GD578_14325 PF10502 Signal peptidase, peptidase S26 GD578_14330 PF00009 Elongation factor Tu GTP binding domain GD578_14330 PF00679 Elongation factor G C-terminus GD578_14330 PF03144 Elongation factor Tu domain 2 GD578_14330 PF06421 GTP-binding protein LepA C-terminus GD578_14340 PF13180 PDZ domain GD578_14345 PF00890 FAD binding domain GD578_14345 PF02910 Fumarate reductase flavoprotein C-term GD578_14355 PF02223 Thymidylate kinase GD578_14360 PF02618 YceG-like family GD578_14365 PF01063 Amino-transferase class IV GD578_14380 PF00528 Binding-protein-dependent transport system inner membrane component GD578_14385 PF00528 Binding-protein-dependent transport system inner membrane component GD578_14390 PF00005 ABC transporter GD578_14390 PF12857 TOBE-like domain GD578_14395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_14395 PF03466 LysR substrate binding domain GD578_14405 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GD578_14405 PF14602 Hexapeptide repeat of succinyl-transferase GD578_14405 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_14410 PF04055 Radical SAM superfamily GD578_14415 PF06508 Queuosine biosynthesis protein QueC GD578_14430 PF00578 AhpC/TSA family GD578_14445 PF01467 Cytidylyltransferase-like GD578_14445 PF00293 NUDIX domain GD578_14450 PF00378 Enoyl-CoA hydratase/isomerase GD578_14455 PF01784 NIF3 (NGG1p interacting factor 3) GD578_14460 PF07690 Major Facilitator Superfamily GD578_14465 PF02769 AIR synthase related protein, C-terminal domain GD578_14465 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GD578_14465 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GD578_14470 PF01966 HD domain GD578_14475 PF01330 RuvA N terminal domain GD578_14475 PF07499 RuvA, C-terminal domain GD578_14480 PF05496 Holliday junction DNA helicase RuvB P-loop domain GD578_14480 PF05491 RuvB C-terminal winged helix domain GD578_14480 PF17864 RuvB AAA lid domain GD578_14485 PF01546 Peptidase family M20/M25/M40 GD578_14485 PF07687 Peptidase dimerisation domain GD578_14490 PF03061 Thioesterase superfamily GD578_14495 PF01618 MotA/TolQ/ExbB proton channel family GD578_14500 PF02472 Biopolymer transport protein ExbD/TolR GD578_14510 PF04052 TolB amino-terminal domain GD578_14510 PF07676 WD40-like Beta Propeller Repeat GD578_14515 PF00691 OmpA family GD578_14525 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GD578_14530 PF08032 RNA 2'-O ribose methyltransferase substrate binding GD578_14530 PF00588 SpoU rRNA Methylase family GD578_14560 PF00308 Bacterial dnaA protein GD578_14560 PF08299 Bacterial dnaA protein helix-turn-helix GD578_14560 PF11638 DnaA N-terminal domain GD578_14565 PF01594 AI-2E family transporter GD578_14570 PF02769 AIR synthase related protein, C-terminal domain GD578_14570 PF00586 AIR synthase related protein, N-terminal domain GD578_14575 PF00551 Formyl transferase GD578_14580 PF12697 Alpha/beta hydrolase family GD578_14585 PF01343 Peptidase family S49 GD578_14585 PF06965 Na+/H+ antiporter 1 GD578_14595 PF03772 Competence protein GD578_14595 PF00753 Metallo-beta-lactamase superfamily GD578_14600 PF00005 ABC transporter GD578_14605 PF12704 MacB-like periplasmic core domain GD578_14605 PF02687 FtsX-like permease family GD578_14615 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GD578_14625 PF00266 Aminotransferase class-V GD578_14635 PF13533 Biotin-lipoyl like GD578_14655 PF00535 Glycosyl transferase family 2 GD578_14665 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GD578_14670 PF03989 DNA gyrase C-terminal domain, beta-propeller GD578_14670 PF00521 DNA gyrase/topoisomerase IV, subunit A GD578_14675 PF16123 Hydroxyacylglutathione hydrolase C-terminus GD578_14675 PF00753 Metallo-beta-lactamase superfamily GD578_14685 PF00766 Electron transfer flavoprotein FAD-binding domain GD578_14685 PF01012 Electron transfer flavoprotein domain GD578_14690 PF01012 Electron transfer flavoprotein domain GD578_14695 PF00589 Phage integrase family GD578_14695 PF02899 Phage integrase, N-terminal SAM-like domain GD578_14700 PF01810 LysE type translocator GD578_14705 PF01678 Diaminopimelate epimerase GD578_14710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GD578_14710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GD578_14720 PF00324 Amino acid permease GD578_14725 PF00324 Amino acid permease GD578_14730 PF18073 Rubredoxin metal binding domain GD578_14740 PF00152 tRNA synthetases class II (D, K and N) GD578_14745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GD578_14745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GD578_14745 PF11890 Domain of unknown function (DUF3410) GD578_14755 PF02634 FdhD/NarQ family GD578_14760 PF00384 Molybdopterin oxidoreductase GD578_14765 PF02595 Glycerate kinase family GD578_14775 PF00106 short chain dehydrogenase GD578_14780 PF00881 Nitroreductase family GD578_14800 PF00529 HlyD membrane-fusion protein of T1SS GD578_14800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD578_14815 PF00561 alpha/beta hydrolase fold GD578_14820 PF00561 alpha/beta hydrolase fold GD578_14820 PF00364 Biotin-requiring enzyme GD578_14825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GD578_14830 PF00440 Bacterial regulatory proteins, tetR family GD578_14860 PF09857 Putative toxin of bacterial toxin-antitoxin pair GD578_14880 PF00550 Phosphopantetheine attachment site GD578_14880 PF00501 AMP-binding enzyme GD578_14880 PF00975 Thioesterase domain GD578_14880 PF00668 Condensation domain GD578_14880 PF13193 AMP-binding enzyme C-terminal domain GD578_14895 PF01272 Transcription elongation factor, GreA/GreB, C-term GD578_14895 PF03449 Transcription elongation factor, N-terminal GD578_14900 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD578_14900 PF01464 Transglycosylase SLT domain GD578_14910 PF01171 PP-loop family GD578_14920 PF01464 Transglycosylase SLT domain GD578_14925 PF01435 Peptidase family M48 GD578_14935 PF00873 AcrB/AcrD/AcrF family GD578_14940 PF03009 Glycerophosphoryl diester phosphodiesterase family GD578_14945 PF00753 Metallo-beta-lactamase superfamily GD578_14950 PF01219 Prokaryotic diacylglycerol kinase GD578_14955 PF14659 Phage integrase, N-terminal SAM-like domain GD578_14955 PF00589 Phage integrase family GD578_14955 PF13356 Arm DNA-binding domain GD578_14960 PF13361 UvrD-like helicase C-terminal domain GD578_14960 PF00580 UvrD/REP helicase N-terminal domain GD578_14970 PF09828 Chromate resistance exported protein GD578_14975 PF02417 Chromate transporter GD578_14985 PF07690 Major Facilitator Superfamily GD578_15005 PF00873 AcrB/AcrD/AcrF family GD578_15010 PF00529 HlyD membrane-fusion protein of T1SS GD578_15010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD578_15065 PF00296 Luciferase-like monooxygenase GD578_15080 PF00199 Catalase GD578_15085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GD578_15085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GD578_15130 PF13411 MerR HTH family regulatory protein GD578_15140 PF01252 Signal peptidase (SPase) II GD578_15150 PF00376 MerR family regulatory protein GD578_15150 PF09278 MerR, DNA binding GD578_15155 PF02411 MerT mercuric transport protein GD578_15160 PF00403 Heavy-metal-associated domain GD578_15165 PF03203 MerC mercury resistance protein GD578_15170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GD578_15170 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_15170 PF00403 Heavy-metal-associated domain GD578_15175 PF13411 MerR HTH family regulatory protein GD578_15195 PF00118 TCP-1/cpn60 chaperonin family GD578_15200 PF00166 Chaperonin 10 Kd subunit GD578_15205 PF00149 Calcineurin-like phosphoesterase GD578_15210 PF00781 Diacylglycerol kinase catalytic domain GD578_15215 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain GD578_15215 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain GD578_15220 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GD578_15220 PF01266 FAD dependent oxidoreductase GD578_15225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GD578_15225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GD578_15230 PF00083 Sugar (and other) transporter GD578_15245 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GD578_15245 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GD578_15260 PF09423 PhoD-like phosphatase GD578_15260 PF16655 PhoD-like phosphatase, N-terminal domain GD578_15280 PF00809 Pterin binding enzyme GD578_15285 PF01434 Peptidase family M41 GD578_15285 PF17862 AAA+ lid domain GD578_15285 PF00004 ATPase family associated with various cellular activities (AAA) GD578_15285 PF06480 FtsH Extracellular GD578_15290 PF01728 FtsJ-like methyltransferase GD578_15295 PF01985 CRS1 / YhbY (CRM) domain GD578_15315 PF00117 Glutamine amidotransferase class-I GD578_15315 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GD578_15320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GD578_15320 PF02142 MGS-like domain GD578_15320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GD578_15325 PF03449 Transcription elongation factor, N-terminal GD578_15325 PF01272 Transcription elongation factor, GreA/GreB, C-term GD578_15330 PF00440 Bacterial regulatory proteins, tetR family GD578_15335 PF01042 Endoribonuclease L-PSP GD578_15340 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_15345 PF00582 Universal stress protein family GD578_15355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GD578_15365 PF09587 Bacterial capsule synthesis protein PGA_cap GD578_15380 PF00999 Sodium/hydrogen exchanger family GD578_15385 PF04228 Putative neutral zinc metallopeptidase GD578_15390 PF05661 Protein of unknown function (DUF808) GD578_15395 PF00579 tRNA synthetases class I (W and Y) GD578_15400 PF00549 CoA-ligase GD578_15400 PF02629 CoA binding domain GD578_15405 PF08442 ATP-grasp domain GD578_15405 PF00549 CoA-ligase GD578_15410 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_15410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GD578_15415 PF00364 Biotin-requiring enzyme GD578_15415 PF02817 e3 binding domain GD578_15415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GD578_15420 PF02779 Transketolase, pyrimidine binding domain GD578_15420 PF16078 2-oxoglutarate dehydrogenase N-terminus GD578_15420 PF00676 Dehydrogenase E1 component GD578_15420 PF16870 2-oxoglutarate dehydrogenase C-terminal GD578_15435 PF13085 2Fe-2S iron-sulfur cluster binding domain GD578_15440 PF00890 FAD binding domain GD578_15440 PF02910 Fumarate reductase flavoprotein C-term GD578_15445 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GD578_15450 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GD578_15455 PF00285 Citrate synthase, C-terminal domain GD578_15480 PF04546 Sigma-70, non-essential region GD578_15480 PF03979 Sigma-70 factor, region 1.1 GD578_15480 PF00140 Sigma-70 factor, region 1.2 GD578_15480 PF04542 Sigma-70 region 2 GD578_15480 PF04539 Sigma-70 region 3 GD578_15480 PF04545 Sigma-70, region 4 GD578_15485 PF04359 Protein of unknown function (DUF493) GD578_15490 PF03099 Biotin/lipoate A/B protein ligase family GD578_15500 PF00465 Iron-containing alcohol dehydrogenase GD578_15505 PF13520 Amino acid permease GD578_15510 PF03358 NADPH-dependent FMN reductase GD578_15515 PF01638 HxlR-like helix-turn-helix GD578_15520 PF00588 SpoU rRNA Methylase family GD578_15525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GD578_15525 PF14824 Sirohaem biosynthesis protein central GD578_15525 PF10414 Sirohaem synthase dimerisation region GD578_15530 PF02403 Seryl-tRNA synthetase N-terminal domain GD578_15530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GD578_15540 PF03548 Outer membrane lipoprotein carrier protein LolA GD578_15545 PF01016 Ribosomal L27 protein GD578_15550 PF00829 Ribosomal prokaryotic L21 protein GD578_15560 PF00348 Polyprenyl synthetase GD578_15570 PF01569 PAP2 superfamily GD578_15575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD578_15575 PF00529 HlyD membrane-fusion protein of T1SS GD578_15580 PF00873 AcrB/AcrD/AcrF family GD578_15585 PF02321 Outer membrane efflux protein GD578_15590 PF01906 Putative heavy-metal-binding GD578_15595 PF01906 Putative heavy-metal-binding GD578_15615 PF08264 Anticodon-binding domain of tRNA GD578_15615 PF00133 tRNA synthetases class I (I, L, M and V) GD578_15615 PF10458 Valyl tRNA synthetase tRNA binding arm GD578_15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_15635 PF03466 LysR substrate binding domain GD578_15645 PF00909 Ammonium Transporter Family GD578_15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_15655 PF08521 Two-component sensor kinase N-terminal GD578_15655 PF00512 His Kinase A (phospho-acceptor) domain GD578_15660 PF00486 Transcriptional regulatory protein, C terminal GD578_15660 PF00072 Response regulator receiver domain GD578_15665 PF00884 Sulfatase GD578_15665 PF08019 Phosphoethanolamine transferase EptA/EptB GD578_15685 PF01734 Patatin-like phospholipase GD578_15695 PF01145 SPFH domain / Band 7 family GD578_15700 PF04237 YjbR GD578_15705 PF00348 Polyprenyl synthetase GD578_15710 PF04303 PrpF protein GD578_15715 PF00324 Amino acid permease GD578_15720 PF09297 NADH pyrophosphatase zinc ribbon domain GD578_15720 PF00293 NUDIX domain GD578_15725 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GD578_15745 PF01965 DJ-1/PfpI family GD578_15750 PF08659 KR domain GD578_15750 PF08240 Alcohol dehydrogenase GroES-like domain GD578_15750 PF00550 Phosphopantetheine attachment site GD578_15750 PF14765 Polyketide synthase dehydratase GD578_15750 PF02801 Beta-ketoacyl synthase, C-terminal domain GD578_15750 PF00109 Beta-ketoacyl synthase, N-terminal domain GD578_15750 PF16197 Ketoacyl-synthetase C-terminal extension GD578_15750 PF09277 Erythronolide synthase, docking GD578_15750 PF08990 Erythronolide synthase docking GD578_15750 PF00698 Acyl transferase domain GD578_15755 PF06719 AraC-type transcriptional regulator N-terminus GD578_15755 PF12833 Helix-turn-helix domain GD578_15760 PF02673 Bacitracin resistance protein BacA GD578_15775 PF12833 Helix-turn-helix domain GD578_15775 PF02311 AraC-like ligand binding domain GD578_15780 PF02525 Flavodoxin-like fold GD578_15795 PF01507 Phosphoadenosine phosphosulfate reductase family GD578_15800 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain GD578_15800 PF06974 Protein of unknown function (DUF1298) GD578_15810 PF10150 Ribonuclease E/G family GD578_15810 PF00575 S1 RNA binding domain GD578_15815 PF02545 Maf-like protein GD578_15820 PF04093 rod shape-determining protein MreD GD578_15825 PF04085 rod shape-determining protein MreC GD578_15835 PF02686 Glu-tRNAGln amidotransferase C subunit GD578_15840 PF01425 Amidase GD578_15845 PF02637 GatB domain GD578_15845 PF02934 GatB/GatE catalytic domain GD578_15885 PF05992 SbmA/BacA-like family GD578_15890 PF00291 Pyridoxal-phosphate dependent enzyme GD578_15890 PF13291 ACT domain GD578_15895 PF01734 Patatin-like phospholipase GD578_15900 PF01235 Sodium:alanine symporter family GD578_15920 PF00881 Nitroreductase family GD578_15925 PF07690 Major Facilitator Superfamily GD578_15930 PF12805 FUSC-like inner membrane protein yccS GD578_15940 PF00258 Flavodoxin GD578_15940 PF00175 Oxidoreductase NAD-binding domain GD578_15940 PF00667 FAD binding domain GD578_15980 PF03734 L,D-transpeptidase catalytic domain GD578_15980 PF17969 L,D-transpeptidase C-terminal domain GD578_15985 PF04304 Protein of unknown function (DUF454) GD578_16000 PF07687 Peptidase dimerisation domain GD578_16000 PF01546 Peptidase family M20/M25/M40 GD578_16010 PF01627 Hpt domain GD578_16010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_16010 PF01584 CheW-like domain GD578_16010 PF00072 Response regulator receiver domain GD578_16015 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GD578_16015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GD578_16020 PF01584 CheW-like domain GD578_16025 PF00072 Response regulator receiver domain GD578_16030 PF00072 Response regulator receiver domain GD578_16045 PF00873 AcrB/AcrD/AcrF family GD578_16050 PF03129 Anticodon binding domain GD578_16050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GD578_16050 PF04073 Aminoacyl-tRNA editing domain GD578_16055 PF07411 Domain of unknown function (DUF1508) GD578_16060 PF08274 PhnA Zinc-Ribbon GD578_16060 PF03831 PhnA domain GD578_16065 PF04343 Protein of unknown function, DUF488 GD578_16075 PF01571 Aminomethyltransferase folate-binding domain GD578_16080 PF10411 Disulfide bond isomerase protein N-terminus GD578_16080 PF13098 Thioredoxin-like domain GD578_16095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GD578_16100 PF07715 TonB-dependent Receptor Plug Domain GD578_16100 PF00593 TonB dependent receptor GD578_16105 PF02245 Methylpurine-DNA glycosylase (MPG) GD578_16110 PF06827 Zinc finger found in FPG and IleRS GD578_16110 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GD578_16110 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GD578_16125 PF01741 Large-conductance mechanosensitive channel, MscL GD578_16135 PF00860 Permease family GD578_16140 PF08468 Methyltransferase small domain N-terminal GD578_16140 PF05175 Methyltransferase small domain GD578_16145 PF00324 Amino acid permease GD578_16150 PF01139 tRNA-splicing ligase RtcB GD578_16155 PF13505 Outer membrane protein beta-barrel domain GD578_16155 PF00691 OmpA family GD578_16165 PF02803 Thiolase, C-terminal domain GD578_16165 PF00108 Thiolase, N-terminal domain GD578_16175 PF00893 Small Multidrug Resistance protein GD578_16185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GD578_16185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GD578_16190 PF01011 PQQ enzyme repeat GD578_16195 PF04966 Carbohydrate-selective porin, OprB family GD578_16200 PF02515 CoA-transferase family III GD578_16205 PF02311 AraC-like ligand binding domain GD578_16205 PF12833 Helix-turn-helix domain GD578_16210 PF00108 Thiolase, N-terminal domain GD578_16210 PF02803 Thiolase, C-terminal domain GD578_16215 PF00378 Enoyl-CoA hydratase/isomerase GD578_16215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GD578_16215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GD578_16230 PF13673 Acetyltransferase (GNAT) domain GD578_16240 PF03006 Haemolysin-III related GD578_16245 PF07690 Major Facilitator Superfamily GD578_16245 PF00083 Sugar (and other) transporter GD578_16255 PF01043 SecA preprotein cross-linking domain GD578_16255 PF02810 SEC-C motif GD578_16255 PF07517 SecA DEAD-like domain GD578_16255 PF07516 SecA Wing and Scaffold domain GD578_16260 PF10417 C-terminal domain of 1-Cys peroxiredoxin GD578_16260 PF00578 AhpC/TSA family GD578_16265 PF00753 Metallo-beta-lactamase superfamily GD578_16280 PF02875 Mur ligase family, glutamate ligase domain GD578_16280 PF08245 Mur ligase middle domain GD578_16285 PF01039 Carboxyl transferase domain GD578_16290 PF00290 Tryptophan synthase alpha chain GD578_16320 PF00291 Pyridoxal-phosphate dependent enzyme GD578_16325 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GD578_16330 PF00593 TonB dependent receptor GD578_16330 PF07715 TonB-dependent Receptor Plug Domain GD578_16335 PF01923 Cobalamin adenosyltransferase GD578_16355 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GD578_16360 PF00072 Response regulator receiver domain GD578_16360 PF00486 Transcriptional regulatory protein, C terminal GD578_16365 PF00672 HAMP domain GD578_16365 PF00512 His Kinase A (phospho-acceptor) domain GD578_16365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_16375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_16375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_16375 PF12806 Acetyl-CoA dehydrogenase C-terminal like GD578_16375 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_16380 PF12806 Acetyl-CoA dehydrogenase C-terminal like GD578_16380 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_16380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_16380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_16385 PF06146 Phosphate-starvation-inducible E GD578_16405 PF07715 TonB-dependent Receptor Plug Domain GD578_16405 PF00593 TonB dependent receptor GD578_16415 PF02938 GAD domain GD578_16415 PF00152 tRNA synthetases class II (D, K and N) GD578_16415 PF01336 OB-fold nucleic acid binding domain GD578_16425 PF13439 Glycosyltransferase Family 4 GD578_16425 PF00534 Glycosyl transferases group 1 GD578_16430 PF00535 Glycosyl transferase family 2 GD578_16435 PF00534 Glycosyl transferases group 1 GD578_16435 PF13439 Glycosyltransferase Family 4 GD578_16445 PF13439 Glycosyltransferase Family 4 GD578_16445 PF00534 Glycosyl transferases group 1 GD578_16450 PF01522 Polysaccharide deacetylase GD578_16460 PF01063 Amino-transferase class IV GD578_16465 PF03710 Glutamate-ammonia ligase adenylyltransferase GD578_16465 PF08335 GlnD PII-uridylyltransferase GD578_16470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_16470 PF00072 Response regulator receiver domain GD578_16470 PF00497 Bacterial extracellular solute-binding proteins, family 3 GD578_16470 PF00512 His Kinase A (phospho-acceptor) domain GD578_16480 PF02547 Queuosine biosynthesis protein GD578_16495 PF01702 Queuine tRNA-ribosyltransferase GD578_16500 PF02699 Preprotein translocase subunit GD578_16505 PF02355 Protein export membrane protein GD578_16505 PF07549 SecD/SecF GG Motif GD578_16505 PF13721 SecD export protein N-terminal TM region GD578_16510 PF07549 SecD/SecF GG Motif GD578_16510 PF02355 Protein export membrane protein GD578_16515 PF02441 Flavoprotein GD578_16515 PF04127 DNA / pantothenate metabolism flavoprotein GD578_16520 PF04002 RadC-like JAB domain GD578_16525 PF01062 Bestrophin, RFP-TM, chloride channel GD578_16530 PF02811 PHP domain GD578_16535 PF04279 Intracellular septation protein A GD578_16540 PF03795 YCII-related domain GD578_16550 PF01266 FAD dependent oxidoreductase GD578_16550 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GD578_16560 PF04461 Protein of unknown function (DUF520) GD578_16575 PF03061 Thioesterase superfamily GD578_16580 PF00085 Thioredoxin GD578_16585 PF00561 alpha/beta hydrolase fold GD578_16590 PF00753 Metallo-beta-lactamase superfamily GD578_16590 PF04273 Putative phosphatase (DUF442) GD578_16600 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_16600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GD578_16635 PF17152 Periplasmic sensor domain GD578_16635 PF00990 Diguanylate cyclase, GGDEF domain GD578_16640 PF00691 OmpA family GD578_16640 PF01389 OmpA-like transmembrane domain GD578_16645 PF00149 Calcineurin-like phosphoesterase GD578_16645 PF10518 TAT (twin-arginine translocation) pathway signal sequence GD578_16650 PF13091 PLD-like domain GD578_16660 PF01926 50S ribosome-binding GTPase GD578_16660 PF16360 GTP-binding GTPase Middle Region GD578_16660 PF13167 GTP-binding GTPase N-terminal GD578_16680 PF00149 Calcineurin-like phosphoesterase GD578_16685 PF00398 Ribosomal RNA adenine dimethylase GD578_16690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GD578_16695 PF00572 Ribosomal protein L13 GD578_16700 PF00380 Ribosomal protein S9/S16 GD578_16705 PF00043 Glutathione S-transferase, C-terminal domain GD578_16705 PF13417 Glutathione S-transferase, N-terminal domain GD578_16710 PF04386 Stringent starvation protein B GD578_16740 PF02785 Biotin carboxylase C-terminal domain GD578_16740 PF00289 Biotin carboxylase, N-terminal domain GD578_16740 PF00364 Biotin-requiring enzyme GD578_16740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GD578_16750 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_16750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_16750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_16755 PF01039 Carboxyl transferase domain GD578_16770 PF17932 Tetracyclin repressor-like, C-terminal domain GD578_16770 PF00440 Bacterial regulatory proteins, tetR family GD578_16775 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_16775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_16775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_16820 PF01066 CDP-alcohol phosphatidyltransferase GD578_16825 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GD578_16845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GD578_16845 PF00056 lactate/malate dehydrogenase, NAD binding domain GD578_16855 PF01464 Transglycosylase SLT domain GD578_16855 PF10145 Phage-related minor tail protein GD578_16855 PF01551 Peptidase family M23 GD578_16860 PF04055 Radical SAM superfamily GD578_16860 PF01938 TRAM domain GD578_16860 PF00919 Uncharacterized protein family UPF0004 GD578_16865 PF02562 PhoH-like protein GD578_16870 PF02130 Uncharacterized protein family UPF0054 GD578_16895 PF03358 NADPH-dependent FMN reductase GD578_16900 PF03631 Virulence factor BrkB GD578_16905 PF00892 EamA-like transporter family GD578_16910 PF12833 Helix-turn-helix domain GD578_16915 PF01557 Fumarylacetoacetate (FAA) hydrolase family GD578_16960 PF00773 RNB domain GD578_16960 PF08461 Ribonuclease R winged-helix domain GD578_16960 PF00575 S1 RNA binding domain GD578_16960 PF08206 Ribonuclease B OB domain GD578_16960 PF17876 Cold shock domain GD578_16965 PF01432 Peptidase family M3 GD578_16970 PF09526 Probable metal-binding protein (DUF2387) GD578_17000 PF03937 Flavinator of succinate dehydrogenase GD578_17005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_17005 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_17005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_17010 PF00743 Flavin-binding monooxygenase-like GD578_17015 PF01196 Ribosomal protein L17 GD578_17020 PF01000 RNA polymerase Rpb3/RpoA insert domain GD578_17020 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GD578_17020 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GD578_17025 PF01479 S4 domain GD578_17025 PF00163 Ribosomal protein S4/S9 N-terminal domain GD578_17030 PF00411 Ribosomal protein S11 GD578_17035 PF00416 Ribosomal protein S13/S18 GD578_17040 PF00444 Ribosomal protein L36 GD578_17045 PF00344 SecY translocase GD578_17050 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GD578_17055 PF00327 Ribosomal protein L30p/L7e GD578_17060 PF03719 Ribosomal protein S5, C-terminal domain GD578_17060 PF00333 Ribosomal protein S5, N-terminal domain GD578_17065 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GD578_17070 PF00347 Ribosomal protein L6 GD578_17075 PF00410 Ribosomal protein S8 GD578_17080 PF00253 Ribosomal protein S14p/S29e GD578_17085 PF00281 Ribosomal protein L5 GD578_17085 PF00673 ribosomal L5P family C-terminus GD578_17090 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GD578_17090 PF00467 KOW motif GD578_17095 PF00238 Ribosomal protein L14p/L23e GD578_17100 PF00366 Ribosomal protein S17 GD578_17105 PF00831 Ribosomal L29 protein GD578_17110 PF00252 Ribosomal protein L16p/L10e GD578_17115 PF00189 Ribosomal protein S3, C-terminal domain GD578_17115 PF07650 KH domain GD578_17120 PF00237 Ribosomal protein L22p/L17e GD578_17125 PF00203 Ribosomal protein S19 GD578_17130 PF03947 Ribosomal Proteins L2, C-terminal domain GD578_17130 PF00181 Ribosomal Proteins L2, RNA binding domain GD578_17135 PF00276 Ribosomal protein L23 GD578_17140 PF00573 Ribosomal protein L4/L1 family GD578_17145 PF00297 Ribosomal protein L3 GD578_17150 PF00338 Ribosomal protein S10p/S20e GD578_17155 PF00117 Glutamine amidotransferase class-I GD578_17160 PF01053 Cys/Met metabolism PLP-dependent enzyme GD578_17165 PF05872 Bacterial protein of unknown function (DUF853) GD578_17170 PF00042 Globin GD578_17170 PF00970 Oxidoreductase FAD-binding domain GD578_17170 PF00175 Oxidoreductase NAD-binding domain GD578_17175 PF02082 Transcriptional regulator GD578_17180 PF01926 50S ribosome-binding GTPase GD578_17190 PF00375 Sodium:dicarboxylate symporter family GD578_17200 PF01553 Acyltransferase GD578_17215 PF00271 Helicase conserved C-terminal domain GD578_17215 PF00270 DEAD/DEAH box helicase GD578_17215 PF17191 RecG wedge domain GD578_17220 PF00156 Phosphoribosyl transferase domain GD578_17225 PF00293 NUDIX domain GD578_17230 PF03641 Possible lysine decarboxylase GD578_17235 PF01544 CorA-like Mg2+ transporter protein GD578_17245 PF05494 MlaC protein GD578_17255 PF02405 Permease MlaE GD578_17260 PF00005 ABC transporter GD578_17265 PF12343 Cold shock protein DEAD box A GD578_17265 PF00270 DEAD/DEAH box helicase GD578_17265 PF03880 DbpA RNA binding domain GD578_17265 PF00271 Helicase conserved C-terminal domain GD578_17270 PF00459 Inositol monophosphatase family GD578_17275 PF02779 Transketolase, pyrimidine binding domain GD578_17275 PF02780 Transketolase, C-terminal domain GD578_17275 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GD578_17280 PF00925 GTP cyclohydrolase II GD578_17290 PF08501 Shikimate dehydrogenase substrate binding domain GD578_17290 PF01488 Shikimate / quinate 5-dehydrogenase GD578_17290 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GD578_17300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GD578_17300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GD578_17300 PF02770 Acyl-CoA dehydrogenase, middle domain GD578_17300 PF12806 Acetyl-CoA dehydrogenase C-terminal like GD578_17310 PF04024 PspC domain GD578_17315 PF00571 CBS domain GD578_17340 PF02091 Glycyl-tRNA synthetase alpha subunit GD578_17345 PF02092 Glycyl-tRNA synthetase beta subunit GD578_17345 PF05746 DALR anticodon binding domain GD578_17360 PF00892 EamA-like transporter family GD578_17365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_17365 PF03466 LysR substrate binding domain GD578_17395 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GD578_17400 PF04996 Succinylarginine dihydrolase GD578_17405 PF00171 Aldehyde dehydrogenase family GD578_17410 PF04958 Arginine N-succinyltransferase beta subunit GD578_17415 PF00202 Aminotransferase class-III GD578_17420 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GD578_17420 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GD578_17425 PF00324 Amino acid permease GD578_17435 PF08241 Methyltransferase domain GD578_17455 PF13614 AAA domain GD578_17460 PF01594 AI-2E family transporter GD578_17465 PF00080 Copper/zinc superoxide dismutase (SODC) GD578_17470 PF12805 FUSC-like inner membrane protein yccS GD578_17475 PF07690 Major Facilitator Superfamily GD578_17485 PF02525 Flavodoxin-like fold GD578_17490 PF03992 Antibiotic biosynthesis monooxygenase GD578_17505 PF02913 FAD linked oxidases, C-terminal domain GD578_17505 PF01565 FAD binding domain GD578_17510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GD578_17510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GD578_17515 PF00892 EamA-like transporter family GD578_17520 PF00892 EamA-like transporter family GD578_17530 PF01925 Sulfite exporter TauE/SafE GD578_17535 PF09157 Pseudouridine synthase II TruB, C-terminal GD578_17535 PF16198 tRNA pseudouridylate synthase B C-terminal domain GD578_17535 PF01509 TruB family pseudouridylate synthase (N terminal domain) GD578_17540 PF03280 Proteobacterial lipase chaperone protein GD578_17545 PF00561 alpha/beta hydrolase fold GD578_17550 PF01245 Ribosomal protein L19 GD578_17555 PF01746 tRNA (Guanine-1)-methyltransferase GD578_17560 PF05239 PRC-barrel domain GD578_17560 PF01782 RimM N-terminal domain GD578_17565 PF00886 Ribosomal protein S16 GD578_17570 PF07963 Prokaryotic N-terminal methylation motif GD578_17570 PF00114 Pilin (bacterial filament) GD578_17575 PF07963 Prokaryotic N-terminal methylation motif GD578_17575 PF00114 Pilin (bacterial filament) GD578_17610 PF02401 LytB protein GD578_17615 PF00625 Guanylate kinase GD578_17620 PF01192 RNA polymerase Rpb6 GD578_17630 PF02824 TGS domain GD578_17630 PF13291 ACT domain GD578_17630 PF04607 Region found in RelA / SpoT proteins GD578_17635 PF01042 Endoribonuclease L-PSP GD578_17640 PF04324 BFD-like [2Fe-2S] binding domain GD578_17645 PF00210 Ferritin-like domain GD578_17650 PF04932 O-Antigen ligase GD578_17650 PF15864 Protein glycosylation ligase GD578_17650 PF11846 Virulence factor membrane-bound polymerase, C-terminal GD578_17665 PF07963 Prokaryotic N-terminal methylation motif GD578_17665 PF00114 Pilin (bacterial filament) GD578_17675 PF04536 TPM domain GD578_17680 PF04011 LemA family GD578_17690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GD578_17690 PF07992 Pyridine nucleotide-disulphide oxidoreductase GD578_17695 PF01493 GXGXG motif GD578_17695 PF01645 Conserved region in glutamate synthase GD578_17695 PF00310 Glutamine amidotransferases class-II GD578_17695 PF04898 Glutamate synthase central domain GD578_17705 PF01761 3-dehydroquinate synthase GD578_17710 PF01202 Shikimate kinase GD578_17715 PF00263 Bacterial type II and III secretion system protein GD578_17715 PF07660 Secretin and TonB N terminus short domain GD578_17715 PF11741 AMIN domain GD578_17715 PF03958 Bacterial type II/III secretion system short domain GD578_17740 PF00912 Transglycosylase GD578_17740 PF17092 Penicillin-binding protein OB-like domain GD578_17740 PF00905 Penicillin binding protein transpeptidase domain GD578_17745 PF13847 Methyltransferase domain GD578_17755 PF00953 Glycosyl transferase family 4 GD578_17760 PF08245 Mur ligase middle domain GD578_17760 PF02875 Mur ligase family, glutamate ligase domain GD578_17760 PF01225 Mur ligase family, catalytic domain GD578_17765 PF08245 Mur ligase middle domain GD578_17765 PF01225 Mur ligase family, catalytic domain GD578_17765 PF02875 Mur ligase family, glutamate ligase domain GD578_17770 PF03717 Penicillin-binding Protein dimerisation domain GD578_17770 PF00905 Penicillin binding protein transpeptidase domain GD578_17780 PF01795 MraW methylase family GD578_17795 PF00749 tRNA synthetases class I (E and Q), catalytic domain GD578_17810 PF00324 Amino acid permease GD578_17840 PF01545 Cation efflux family GD578_17845 PF00873 AcrB/AcrD/AcrF family GD578_17850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD578_17850 PF00529 HlyD membrane-fusion protein of T1SS GD578_17870 PF04191 Phospholipid methyltransferase GD578_17895 PF00005 ABC transporter GD578_17895 PF12848 ABC transporter GD578_17900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GD578_17900 PF00205 Thiamine pyrophosphate enzyme, central domain GD578_17900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GD578_17905 PF01053 Cys/Met metabolism PLP-dependent enzyme GD578_17910 PF00106 short chain dehydrogenase GD578_17915 PF00916 Sulfate permease family GD578_17915 PF01740 STAS domain GD578_17920 PF09371 Tex-like protein N-terminal domain GD578_17920 PF16921 Tex protein YqgF-like domain GD578_17920 PF17674 HHH domain GD578_17920 PF00575 S1 RNA binding domain GD578_17925 PF00486 Transcriptional regulatory protein, C terminal GD578_17925 PF00072 Response regulator receiver domain GD578_17930 PF00672 HAMP domain GD578_17930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_17930 PF00512 His Kinase A (phospho-acceptor) domain GD578_17940 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GD578_17940 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GD578_17945 PF00583 Acetyltransferase (GNAT) family GD578_17965 PF00475 Imidazoleglycerol-phosphate dehydratase GD578_17970 PF00117 Glutamine amidotransferase class-I GD578_17985 PF00977 Histidine biosynthesis protein GD578_17990 PF00005 ABC transporter GD578_17990 PF00664 ABC transporter transmembrane region GD578_18015 PF01636 Phosphotransferase enzyme family GD578_18020 PF00977 Histidine biosynthesis protein GD578_18035 PF00230 Major intrinsic protein GD578_18060 PF02705 K+ potassium transporter GD578_18070 PF12833 Helix-turn-helix domain GD578_18090 PF02525 Flavodoxin-like fold GD578_18095 PF01638 HxlR-like helix-turn-helix GD578_18135 PF02311 AraC-like ligand binding domain GD578_18135 PF12833 Helix-turn-helix domain GD578_18140 PF00248 Aldo/keto reductase family GD578_18160 PF03466 LysR substrate binding domain GD578_18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_18165 PF07690 Major Facilitator Superfamily GD578_18190 PF01593 Flavin containing amine oxidoreductase GD578_18195 PF05726 Pirin C-terminal cupin domain GD578_18195 PF02678 Pirin GD578_18200 PF00857 Isochorismatase family GD578_18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_18210 PF00171 Aldehyde dehydrogenase family GD578_18215 PF00202 Aminotransferase class-III GD578_18220 PF00392 Bacterial regulatory proteins, gntR family GD578_18220 PF00155 Aminotransferase class I and II GD578_18225 PF00324 Amino acid permease GD578_18235 PF03591 AzlC protein GD578_18280 PF00436 Single-strand binding protein family GD578_18285 PF07690 Major Facilitator Superfamily GD578_18295 PF03070 TENA/THI-4/PQQC family GD578_18295 PF08543 Phosphomethylpyrimidine kinase GD578_18295 PF02581 Thiamine monophosphate synthase GD578_18300 PF06942 GlpM protein GD578_18310 PF08240 Alcohol dehydrogenase GroES-like domain GD578_18310 PF00107 Zinc-binding dehydrogenase GD578_18315 PF00440 Bacterial regulatory proteins, tetR family GD578_18315 PF16925 Tetracyclin repressor-like, C-terminal domain GD578_18320 PF17760 UvrA interaction domain GD578_18320 PF17755 UvrA DNA-binding domain GD578_18325 PF00990 Diguanylate cyclase, GGDEF domain GD578_18325 PF17158 Membrane-associated sensor, integral membrane domain GD578_18335 PF02028 BCCT, betaine/carnitine/choline family transporter GD578_18345 PF00474 Sodium:solute symporter family GD578_18350 PF04341 Protein of unknown function, DUF485 GD578_18355 PF00512 His Kinase A (phospho-acceptor) domain GD578_18355 PF01627 Hpt domain GD578_18355 PF00072 Response regulator receiver domain GD578_18355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_18355 PF00672 HAMP domain GD578_18365 PF00072 Response regulator receiver domain GD578_18365 PF00196 Bacterial regulatory proteins, luxR family GD578_18370 PF03358 NADPH-dependent FMN reductase GD578_18375 PF00296 Luciferase-like monooxygenase GD578_18380 PF01037 Lrp/AsnC ligand binding domain GD578_18385 PF00857 Isochorismatase family GD578_18390 PF13193 AMP-binding enzyme C-terminal domain GD578_18390 PF00501 AMP-binding enzyme GD578_18390 PF16177 Acetyl-coenzyme A synthetase N-terminus GD578_18400 PF00924 Mechanosensitive ion channel GD578_18400 PF05552 Conserved TM helix GD578_18405 PF04452 RNA methyltransferase GD578_18410 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GD578_18415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GD578_18435 PF17768 RecJ OB domain GD578_18435 PF01368 DHH family GD578_18435 PF02272 DHHA1 domain GD578_18440 PF01243 Pyridoxamine 5'-phosphate oxidase GD578_18440 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GD578_18445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GD578_18445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GD578_18445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GD578_18445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GD578_18450 PF00478 IMP dehydrogenase / GMP reductase domain GD578_18450 PF00571 CBS domain GD578_18455 PF03692 Putative zinc- or iron-chelating domain GD578_18460 PF01613 Flavin reductase like domain GD578_18460 PF00258 Flavodoxin GD578_18465 PF01169 Uncharacterized protein family UPF0016 GD578_18475 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GD578_18475 PF02817 e3 binding domain GD578_18475 PF00364 Biotin-requiring enzyme GD578_18480 PF17831 Pyruvate dehydrogenase E1 component middle domain GD578_18480 PF00456 Transketolase, thiamine diphosphate binding domain GD578_18485 PF01551 Peptidase family M23 GD578_18495 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GD578_18500 PF12327 FtsZ family, C-terminal domain GD578_18500 PF00091 Tubulin/FtsZ family, GTPase domain GD578_18505 PF02491 SHS2 domain inserted in FTSA GD578_18510 PF08478 POTRA domain, FtsQ-type GD578_18510 PF03799 Cell division protein FtsQ GD578_18515 PF07478 D-ala D-ala ligase C-terminus GD578_18515 PF01820 D-ala D-ala ligase N-terminus GD578_18520 PF08245 Mur ligase middle domain GD578_18520 PF02875 Mur ligase family, glutamate ligase domain GD578_18520 PF01225 Mur ligase family, catalytic domain GD578_18525 PF03033 Glycosyltransferase family 28 N-terminal domain GD578_18525 PF04101 Glycosyltransferase family 28 C-terminal domain GD578_18535 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GD578_18535 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GD578_18545 PF00593 TonB dependent receptor GD578_18545 PF07715 TonB-dependent Receptor Plug Domain GD578_18550 PF00156 Phosphoribosyl transferase domain GD578_18555 PF03372 Endonuclease/Exonuclease/phosphatase family GD578_18560 PF03960 ArsC family GD578_18570 PF07859 alpha/beta hydrolase fold GD578_18575 PF00990 Diguanylate cyclase, GGDEF domain GD578_18575 PF07694 5TMR of 5TMR-LYT GD578_18580 PF02683 Cytochrome C biogenesis protein transmembrane region GD578_18580 PF11412 Disulphide bond corrector protein DsbC GD578_18610 PF00576 HIUase/Transthyretin family GD578_18615 PF00860 Permease family GD578_18625 PF01494 FAD binding domain GD578_18630 PF03561 Allantoicase repeat GD578_18635 PF04115 Ureidoglycolate lyase GD578_18640 PF01751 Toprim domain GD578_18640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_18640 PF00986 DNA gyrase B subunit, carboxyl terminus GD578_18640 PF00204 DNA gyrase B GD578_18645 PF05728 Uncharacterised protein family (UPF0227) GD578_18700 PF01471 Putative peptidoglycan binding domain GD578_18700 PF01510 N-acetylmuramoyl-L-alanine amidase GD578_18700 PF01476 LysM domain GD578_18705 PF04717 Type VI secretion system, phage-baseplate injector GD578_18710 PF02600 Disulfide bond formation protein DsbB GD578_18715 PF04262 Glutamate-cysteine ligase GD578_18730 PF04286 Protein of unknown function (DUF445) GD578_18735 PF00155 Aminotransferase class I and II GD578_18740 PF01554 MatE GD578_18745 PF00106 short chain dehydrogenase GD578_18755 PF00072 Response regulator receiver domain GD578_18755 PF00486 Transcriptional regulatory protein, C terminal GD578_18760 PF11808 Phosphate regulon sensor protein PhoR GD578_18760 PF00989 PAS fold GD578_18760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_18760 PF00512 His Kinase A (phospho-acceptor) domain GD578_18775 PF02666 Phosphatidylserine decarboxylase GD578_18780 PF00581 Rhodanese-like domain GD578_18785 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GD578_18785 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GD578_18790 PF02580 D-Tyr-tRNA(Tyr) deacylase GD578_18820 PF00925 GTP cyclohydrolase II GD578_18820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GD578_18825 PF00885 6,7-dimethyl-8-ribityllumazine synthase GD578_18830 PF01029 NusB family GD578_18835 PF00586 AIR synthase related protein, N-terminal domain GD578_18835 PF02769 AIR synthase related protein, C-terminal domain GD578_18840 PF04608 Phosphatidylglycerophosphatase A GD578_18845 PF14602 Hexapeptide repeat of succinyl-transferase GD578_18845 PF00132 Bacterial transferase hexapeptide (six repeats) GD578_18845 PF12804 MobA-like NTP transferase domain GD578_18850 PF01380 SIS domain GD578_18865 PF01810 LysE type translocator GD578_18870 PF01177 Asp/Glu/Hydantoin racemase GD578_18885 PF00491 Arginase family GD578_18890 PF01979 Amidohydrolase family GD578_18895 PF00324 Amino acid permease GD578_18900 PF00221 Aromatic amino acid lyase GD578_18905 PF17391 Urocanase N-terminal domain GD578_18905 PF01175 Urocanase Rossmann-like domain GD578_18905 PF17392 Urocanase C-terminal domain GD578_18910 PF05962 HutD GD578_18915 PF07702 UTRA domain GD578_18915 PF00392 Bacterial regulatory proteins, gntR family GD578_18925 PF02492 CobW/HypB/UreG, nucleotide-binding domain GD578_18925 PF07683 Cobalamin synthesis protein cobW C-terminal domain GD578_18935 PF00324 Amino acid permease GD578_18945 PF14497 Glutathione S-transferase, C-terminal domain GD578_18945 PF02798 Glutathione S-transferase, N-terminal domain GD578_18950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GD578_18960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GD578_18965 PF04463 Protein of unknown function (DUF523) GD578_18970 PF01554 MatE GD578_18975 PF01758 Sodium Bile acid symporter family GD578_18980 PF00857 Isochorismatase family GD578_18985 PF00701 Dihydrodipicolinate synthetase family GD578_18995 PF01259 SAICAR synthetase GD578_19005 PF01226 Formate/nitrite transporter GD578_19010 PF00004 ATPase family associated with various cellular activities (AAA) GD578_19010 PF12002 MgsA AAA+ ATPase C terminal GD578_19010 PF16193 AAA C-terminal domain GD578_19015 PF07995 Glucose / Sorbosone dehydrogenase GD578_19020 PF03692 Putative zinc- or iron-chelating domain GD578_19025 PF07043 Protein of unknown function (DUF1328) GD578_19040 PF10576 Iron-sulfur binding domain of endonuclease III GD578_19040 PF14815 NUDIX domain GD578_19040 PF00730 HhH-GPD superfamily base excision DNA repair protein GD578_19040 PF00633 Helix-hairpin-helix motif GD578_19055 PF03352 Methyladenine glycosylase GD578_19060 PF00107 Zinc-binding dehydrogenase GD578_19060 PF08240 Alcohol dehydrogenase GroES-like domain GD578_19065 PF00392 Bacterial regulatory proteins, gntR family GD578_19065 PF00155 Aminotransferase class I and II GD578_19080 PF03466 LysR substrate binding domain GD578_19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_19085 PF00248 Aldo/keto reductase family GD578_19090 PF07690 Major Facilitator Superfamily GD578_19100 PF01113 Dihydrodipicolinate reductase, N-terminus GD578_19100 PF05173 Dihydrodipicolinate reductase, C-terminus GD578_19110 PF01556 DnaJ C terminal domain GD578_19110 PF00226 DnaJ domain GD578_19110 PF00684 DnaJ central domain GD578_19120 PF00873 AcrB/AcrD/AcrF family GD578_19125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GD578_19130 PF00440 Bacterial regulatory proteins, tetR family GD578_19130 PF08361 MAATS-type transcriptional repressor, C-terminal region GD578_19135 PF00311 Phosphoenolpyruvate carboxylase GD578_19140 PF00860 Permease family GD578_19145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GD578_19145 PF03466 LysR substrate binding domain GD578_19160 PF00920 Dehydratase family GD578_19165 PF00551 Formyl transferase GD578_19165 PF02911 Formyl transferase, C-terminal domain GD578_19170 PF01029 NusB family GD578_19170 PF01189 16S rRNA methyltransferase RsmB/F GD578_19180 PF00209 Sodium:neurotransmitter symporter family GD578_19220 PF00579 tRNA synthetases class I (W and Y) GD578_19225 PF03702 Anhydro-N-acetylmuramic acid kinase GD578_19230 PF00561 alpha/beta hydrolase fold GD578_19235 PF01521 Iron-sulphur cluster biosynthesis GD578_19255 PF00005 ABC transporter GD578_19255 PF12848 ABC transporter GD578_19260 PF09335 SNARE associated Golgi protein GD578_19270 PF00204 DNA gyrase B GD578_19270 PF00986 DNA gyrase B subunit, carboxyl terminus GD578_19270 PF18053 DNA gyrase B subunit insert domain GD578_19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_19270 PF01751 Toprim domain GD578_19275 PF02463 RecF/RecN/SMC N terminal domain GD578_19280 PF00712 DNA polymerase III beta subunit, N-terminal domain GD578_19280 PF02767 DNA polymerase III beta subunit, central domain GD578_19280 PF02768 DNA polymerase III beta subunit, C-terminal domain GD578_19285 PF11638 DnaA N-terminal domain GD578_19285 PF08299 Bacterial dnaA protein helix-turn-helix GD578_19285 PF00308 Bacterial dnaA protein GD578_19290 PF00468 Ribosomal protein L34 GD578_19295 PF00825 Ribonuclease P GD578_19300 PF01809 Putative membrane protein insertion efficiency factor GD578_19305 PF14849 YidC periplasmic domain GD578_19305 PF02096 60Kd inner membrane protein GD578_19310 PF10396 GTP-binding protein TrmE N-terminus GD578_19310 PF12631 MnmE helical domain GD578_19310 PF01926 50S ribosome-binding GTPase GD578_19315 PF02583 Metal-sensitive transcriptional repressor GD578_19320 PF16916 Dimerisation domain of Zinc Transporter GD578_19320 PF01545 Cation efflux family GD578_19325 PF13098 Thioredoxin-like domain GD578_19325 PF10411 Disulfide bond isomerase protein N-terminus GD578_19335 PF00156 Phosphoribosyl transferase domain GD578_19340 PF01979 Amidohydrolase family GD578_19345 PF00355 Rieske [2Fe-2S] domain GD578_19350 PF03738 Glutathionylspermidine synthase preATP-grasp GD578_19360 PF03741 Integral membrane protein TerC family GD578_19365 PF01569 PAP2 superfamily GD578_19375 PF08245 Mur ligase middle domain GD578_19375 PF02875 Mur ligase family, glutamate ligase domain GD578_19375 PF01225 Mur ligase family, catalytic domain GD578_19390 PF00731 AIR carboxylase GD578_19395 PF02222 ATP-grasp domain GD578_19395 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GD578_19400 PF13406 Transglycosylase SLT domain GD578_19420 PF00012 Hsp70 protein GD578_19425 PF01025 GrpE GD578_19450 PF07859 alpha/beta hydrolase fold GD578_19455 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GD578_19460 PF00873 AcrB/AcrD/AcrF family GD578_19465 PF02321 Outer membrane efflux protein GD578_19470 PF07690 Major Facilitator Superfamily GD578_19480 PF13610 DDE domain GD578_19490 PF01965 DJ-1/PfpI family GD578_19495 PF02522 Aminoglycoside 3-N-acetyltransferase GD578_19530 PF00809 Pterin binding enzyme GD578_19560 PF01551 Peptidase family M23 GD578_19560 PF04225 Opacity-associated protein A LysM-like domain GD578_19580 PF17762 HTH domain found in ParB protein GD578_19580 PF02195 ParB-like nuclease domain GD578_19585 PF13614 AAA domain GD578_19635 PF00437 Type II/IV secretion system protein GD578_19635 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GD578_19740 PF14863 Alkyl sulfatase dimerisation GD578_19740 PF14864 Alkyl sulfatase C-terminal GD578_19740 PF00753 Metallo-beta-lactamase superfamily GD578_19750 PF13340 Putative transposase of IS4/5 family (DUF4096) GD578_19760 PF12833 Helix-turn-helix domain GD578_19760 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GD578_19765 PF00171 Aldehyde dehydrogenase family GD578_19770 PF05199 GMC oxidoreductase GD578_19780 PF15978 Tn7-like transposition protein D GD578_19780 PF06527 TniQ GD578_19785 PF18623 TnsE C-terminal domain GD578_19805 PF00665 Integrase core domain GD578_19805 PF13936 Helix-turn-helix domain GD578_19810 PF00753 Metallo-beta-lactamase superfamily GD578_19820 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GD578_19825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GD578_19830 PF03091 CutA1 divalent ion tolerance protein GD578_19835 PF00166 Chaperonin 10 Kd subunit GD578_19840 PF00118 TCP-1/cpn60 chaperonin family GD578_19860 PF00665 Integrase core domain GD578_19860 PF13936 Helix-turn-helix domain GD578_19940 PF01751 Toprim domain GD578_19940 PF01131 DNA topoisomerase GD578_19940 PF01396 Topoisomerase DNA binding C4 zinc finger GD578_19960 PF02661 Fic/DOC family GD578_19970 PF02899 Phage integrase, N-terminal SAM-like domain GD578_19970 PF00589 Phage integrase family GD578_20005 PF00817 impB/mucB/samB family GD578_20005 PF13438 Domain of unknown function (DUF4113) GD578_20005 PF11799 impB/mucB/samB family C-terminal domain GD578_20025 PF12161 HsdM N-terminal domain GD578_20025 PF02384 N-6 DNA Methylase GD578_20030 PF01420 Type I restriction modification DNA specificity domain GD578_20060 PF08676 MutL C terminal dimerisation domain GD578_20060 PF01119 DNA mismatch repair protein, C-terminal domain GD578_20065 PF01435 Peptidase family M48 GD578_20080 PF00816 H-NS histone family GD578_20175 PF01636 Phosphotransferase enzyme family GD578_20180 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase GD578_20190 PF13610 DDE domain GD578_20205 PF05973 Phage derived protein Gp49-like (DUF891) GD578_20210 PF01381 Helix-turn-helix GD578_20215 PF01740 STAS domain GD578_20215 PF00916 Sulfate permease family GD578_20230 PF00905 Penicillin binding protein transpeptidase domain GD578_20245 PF12833 Helix-turn-helix domain GD578_20275 PF01381 Helix-turn-helix GD578_20300 PF01636 Phosphotransferase enzyme family GD578_20305 PF02796 Helix-turn-helix domain of resolvase GD578_20305 PF00239 Resolvase, N terminal domain GD578_20315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GD578_20315 PF00672 HAMP domain GD578_20315 PF00512 His Kinase A (phospho-acceptor) domain GD578_20320 PF00486 Transcriptional regulatory protein, C terminal GD578_20320 PF00072 Response regulator receiver domain GD578_20325 PF00529 HlyD membrane-fusion protein of T1SS GD578_20325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion