locus-tag class description AL533_00010 PF07690 Major Facilitator Superfamily AL533_00015 PF12805 FUSC-like inner membrane protein yccS AL533_00020 PF00080 Copper/zinc superoxide dismutase (SODC) AL533_00025 PF01594 AI-2E family transporter AL533_00030 PF13614 AAA domain AL533_00050 PF08241 Methyltransferase domain AL533_00060 PF00324 Amino acid permease AL533_00065 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AL533_00065 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AL533_00070 PF00202 Aminotransferase class-III AL533_00075 PF04958 Arginine N-succinyltransferase beta subunit AL533_00080 PF00171 Aldehyde dehydrogenase family AL533_00085 PF04996 Succinylarginine dihydrolase AL533_00090 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL533_00120 PF03466 LysR substrate binding domain AL533_00120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_00125 PF00892 EamA-like transporter family AL533_00135 PF02092 Glycyl-tRNA synthetase beta subunit AL533_00135 PF05746 DALR anticodon binding domain AL533_00140 PF02091 Glycyl-tRNA synthetase alpha subunit AL533_00165 PF00571 CBS domain AL533_00170 PF04024 PspC domain AL533_00180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_00180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_00180 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_00180 PF12806 Acetyl-CoA dehydrogenase C-terminal like AL533_00190 PF08501 Shikimate dehydrogenase substrate binding domain AL533_00190 PF01488 Shikimate / quinate 5-dehydrogenase AL533_00190 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AL533_00200 PF00925 GTP cyclohydrolase II AL533_00205 PF02779 Transketolase, pyrimidine binding domain AL533_00205 PF02780 Transketolase, C-terminal domain AL533_00205 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AL533_00210 PF00459 Inositol monophosphatase family AL533_00215 PF03880 DbpA RNA binding domain AL533_00215 PF00271 Helicase conserved C-terminal domain AL533_00215 PF12343 Cold shock protein DEAD box A AL533_00215 PF00270 DEAD/DEAH box helicase AL533_00220 PF00005 ABC transporter AL533_00225 PF02405 Permease MlaE AL533_00235 PF05494 MlaC protein AL533_00245 PF01544 CorA-like Mg2+ transporter protein AL533_00250 PF03641 Possible lysine decarboxylase AL533_00255 PF00293 NUDIX domain AL533_00260 PF00156 Phosphoribosyl transferase domain AL533_00265 PF17191 RecG wedge domain AL533_00265 PF00271 Helicase conserved C-terminal domain AL533_00265 PF00270 DEAD/DEAH box helicase AL533_00280 PF01553 Acyltransferase AL533_00290 PF00375 Sodium:dicarboxylate symporter family AL533_00300 PF01926 50S ribosome-binding GTPase AL533_00305 PF02082 Transcriptional regulator AL533_00310 PF00175 Oxidoreductase NAD-binding domain AL533_00310 PF00042 Globin AL533_00310 PF00970 Oxidoreductase FAD-binding domain AL533_00315 PF05872 Bacterial protein of unknown function (DUF853) AL533_00320 PF01053 Cys/Met metabolism PLP-dependent enzyme AL533_00325 PF00117 Glutamine amidotransferase class-I AL533_00330 PF00338 Ribosomal protein S10p/S20e AL533_00335 PF00297 Ribosomal protein L3 AL533_00340 PF00573 Ribosomal protein L4/L1 family AL533_00345 PF00276 Ribosomal protein L23 AL533_00350 PF03947 Ribosomal Proteins L2, C-terminal domain AL533_00350 PF00181 Ribosomal Proteins L2, RNA binding domain AL533_00355 PF00203 Ribosomal protein S19 AL533_00360 PF00237 Ribosomal protein L22p/L17e AL533_00365 PF00189 Ribosomal protein S3, C-terminal domain AL533_00365 PF07650 KH domain AL533_00370 PF00252 Ribosomal protein L16p/L10e AL533_00375 PF00831 Ribosomal L29 protein AL533_00380 PF00366 Ribosomal protein S17 AL533_00385 PF00238 Ribosomal protein L14p/L23e AL533_00390 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AL533_00390 PF00467 KOW motif AL533_00395 PF00673 ribosomal L5P family C-terminus AL533_00395 PF00281 Ribosomal protein L5 AL533_00400 PF00253 Ribosomal protein S14p/S29e AL533_00405 PF00410 Ribosomal protein S8 AL533_00410 PF00347 Ribosomal protein L6 AL533_00415 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AL533_00420 PF03719 Ribosomal protein S5, C-terminal domain AL533_00420 PF00333 Ribosomal protein S5, N-terminal domain AL533_00425 PF00327 Ribosomal protein L30p/L7e AL533_00430 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AL533_00435 PF00344 SecY translocase AL533_00440 PF00444 Ribosomal protein L36 AL533_00445 PF00416 Ribosomal protein S13/S18 AL533_00450 PF00411 Ribosomal protein S11 AL533_00455 PF00163 Ribosomal protein S4/S9 N-terminal domain AL533_00455 PF01479 S4 domain AL533_00460 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AL533_00460 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AL533_00460 PF01000 RNA polymerase Rpb3/RpoA insert domain AL533_00465 PF01196 Ribosomal protein L17 AL533_00470 PF00743 Flavin-binding monooxygenase-like AL533_00475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_00475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_00475 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_00480 PF03937 Flavinator of succinate dehydrogenase AL533_00510 PF09526 Probable metal-binding protein (DUF2387) AL533_00515 PF01432 Peptidase family M3 AL533_00520 PF00773 RNB domain AL533_00520 PF08206 Ribonuclease B OB domain AL533_00520 PF08461 Ribonuclease R winged-helix domain AL533_00520 PF00575 S1 RNA binding domain AL533_00520 PF17876 Cold shock domain AL533_00565 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL533_00570 PF12833 Helix-turn-helix domain AL533_00575 PF00892 EamA-like transporter family AL533_00580 PF03631 Virulence factor BrkB AL533_00585 PF03358 NADPH-dependent FMN reductase AL533_00610 PF02130 Uncharacterized protein family UPF0054 AL533_00615 PF02562 PhoH-like protein AL533_00620 PF01938 TRAM domain AL533_00620 PF00919 Uncharacterized protein family UPF0004 AL533_00620 PF04055 Radical SAM superfamily AL533_00625 PF01551 Peptidase family M23 AL533_00625 PF10145 Phage-related minor tail protein AL533_00625 PF01464 Transglycosylase SLT domain AL533_00635 PF00056 lactate/malate dehydrogenase, NAD binding domain AL533_00635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL533_00655 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AL533_00660 PF01066 CDP-alcohol phosphatidyltransferase AL533_00710 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_00710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_00710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_00715 PF00440 Bacterial regulatory proteins, tetR family AL533_00715 PF17932 Tetracyclin repressor-like, C-terminal domain AL533_00730 PF01039 Carboxyl transferase domain AL533_00755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL533_00755 PF02785 Biotin carboxylase C-terminal domain AL533_00755 PF00289 Biotin carboxylase, N-terminal domain AL533_00755 PF00364 Biotin-requiring enzyme AL533_00785 PF04386 Stringent starvation protein B AL533_00790 PF13417 Glutathione S-transferase, N-terminal domain AL533_00790 PF00043 Glutathione S-transferase, C-terminal domain AL533_00795 PF00380 Ribosomal protein S9/S16 AL533_00800 PF00572 Ribosomal protein L13 AL533_00805 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AL533_00810 PF00398 Ribosomal RNA adenine dimethylase AL533_00815 PF00149 Calcineurin-like phosphoesterase AL533_00835 PF13167 GTP-binding GTPase N-terminal AL533_00835 PF16360 GTP-binding GTPase Middle Region AL533_00835 PF01926 50S ribosome-binding GTPase AL533_00845 PF13091 PLD-like domain AL533_00850 PF10518 TAT (twin-arginine translocation) pathway signal sequence AL533_00850 PF00149 Calcineurin-like phosphoesterase AL533_00855 PF00691 OmpA family AL533_00855 PF01389 OmpA-like transmembrane domain AL533_00860 PF17152 Periplasmic sensor domain AL533_00860 PF00990 Diguanylate cyclase, GGDEF domain AL533_00895 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_00895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL533_00905 PF04273 Putative phosphatase (DUF442) AL533_00905 PF00753 Metallo-beta-lactamase superfamily AL533_00910 PF00561 alpha/beta hydrolase fold AL533_00915 PF00085 Thioredoxin AL533_00920 PF03061 Thioesterase superfamily AL533_00935 PF04461 Protein of unknown function (DUF520) AL533_00945 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AL533_00945 PF01266 FAD dependent oxidoreductase AL533_00955 PF03795 YCII-related domain AL533_00960 PF04279 Intracellular septation protein A AL533_00965 PF02811 PHP domain AL533_00970 PF01062 Bestrophin, RFP-TM, chloride channel AL533_00975 PF04002 RadC-like JAB domain AL533_00980 PF02441 Flavoprotein AL533_00980 PF04127 DNA / pantothenate metabolism flavoprotein AL533_00985 PF02355 Protein export membrane protein AL533_00985 PF07549 SecD/SecF GG Motif AL533_00990 PF07549 SecD/SecF GG Motif AL533_00990 PF13721 SecD export protein N-terminal TM region AL533_00990 PF02355 Protein export membrane protein AL533_00995 PF02699 Preprotein translocase subunit AL533_01000 PF01702 Queuine tRNA-ribosyltransferase AL533_01015 PF02547 Queuosine biosynthesis protein AL533_01025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_01025 PF00512 His Kinase A (phospho-acceptor) domain AL533_01025 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL533_01025 PF00072 Response regulator receiver domain AL533_01030 PF08335 GlnD PII-uridylyltransferase AL533_01030 PF03710 Glutamate-ammonia ligase adenylyltransferase AL533_01035 PF01063 Amino-transferase class IV AL533_01045 PF00884 Sulfatase AL533_01055 PF01522 Polysaccharide deacetylase AL533_01060 PF00535 Glycosyl transferase family 2 AL533_01065 PF13439 Glycosyltransferase Family 4 AL533_01065 PF00534 Glycosyl transferases group 1 AL533_01090 PF17103 Stealth protein CR4, conserved region 4 AL533_01090 PF11380 Stealth protein CR2, conserved region 2 AL533_01090 PF17101 Stealth protein CR1, conserved region 1 AL533_01095 PF02938 GAD domain AL533_01095 PF00152 tRNA synthetases class II (D, K and N) AL533_01095 PF01336 OB-fold nucleic acid binding domain AL533_01105 PF07715 TonB-dependent Receptor Plug Domain AL533_01105 PF00593 TonB dependent receptor AL533_01125 PF06146 Phosphate-starvation-inducible E AL533_01130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_01130 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_01130 PF12806 Acetyl-CoA dehydrogenase C-terminal like AL533_01130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_01135 PF12806 Acetyl-CoA dehydrogenase C-terminal like AL533_01135 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_01135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_01135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_01145 PF00672 HAMP domain AL533_01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_01145 PF00512 His Kinase A (phospho-acceptor) domain AL533_01150 PF00486 Transcriptional regulatory protein, C terminal AL533_01150 PF00072 Response regulator receiver domain AL533_01155 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AL533_01175 PF01923 Cobalamin adenosyltransferase AL533_01180 PF07715 TonB-dependent Receptor Plug Domain AL533_01180 PF00593 TonB dependent receptor AL533_01185 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AL533_01190 PF00291 Pyridoxal-phosphate dependent enzyme AL533_01220 PF00290 Tryptophan synthase alpha chain AL533_01225 PF01039 Carboxyl transferase domain AL533_01230 PF02875 Mur ligase family, glutamate ligase domain AL533_01230 PF08245 Mur ligase middle domain AL533_01245 PF00753 Metallo-beta-lactamase superfamily AL533_01250 PF00578 AhpC/TSA family AL533_01250 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL533_01255 PF07517 SecA DEAD-like domain AL533_01255 PF01043 SecA preprotein cross-linking domain AL533_01255 PF02810 SEC-C motif AL533_01255 PF07516 SecA Wing and Scaffold domain AL533_01265 PF00083 Sugar (and other) transporter AL533_01265 PF07690 Major Facilitator Superfamily AL533_01270 PF03006 Haemolysin-III related AL533_01280 PF13673 Acetyltransferase (GNAT) domain AL533_01295 PF00378 Enoyl-CoA hydratase/isomerase AL533_01295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL533_01295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL533_01300 PF02803 Thiolase, C-terminal domain AL533_01300 PF00108 Thiolase, N-terminal domain AL533_01305 PF02311 AraC-like ligand binding domain AL533_01305 PF12833 Helix-turn-helix domain AL533_01310 PF02515 CoA-transferase family III AL533_01315 PF04966 Carbohydrate-selective porin, OprB family AL533_01320 PF01011 PQQ enzyme repeat AL533_01325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL533_01325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL533_01335 PF00893 Small Multidrug Resistance protein AL533_01345 PF02803 Thiolase, C-terminal domain AL533_01345 PF00108 Thiolase, N-terminal domain AL533_01355 PF00691 OmpA family AL533_01355 PF13505 Outer membrane protein beta-barrel domain AL533_01360 PF01139 tRNA-splicing ligase RtcB AL533_01365 PF00324 Amino acid permease AL533_01370 PF08468 Methyltransferase small domain N-terminal AL533_01370 PF05175 Methyltransferase small domain AL533_01375 PF00860 Permease family AL533_01385 PF01741 Large-conductance mechanosensitive channel, MscL AL533_01400 PF06827 Zinc finger found in FPG and IleRS AL533_01400 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AL533_01400 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AL533_01405 PF02245 Methylpurine-DNA glycosylase (MPG) AL533_01410 PF00593 TonB dependent receptor AL533_01410 PF07715 TonB-dependent Receptor Plug Domain AL533_01415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL533_01430 PF13098 Thioredoxin-like domain AL533_01430 PF10411 Disulfide bond isomerase protein N-terminus AL533_01435 PF01571 Aminomethyltransferase folate-binding domain AL533_01445 PF04343 Protein of unknown function, DUF488 AL533_01450 PF03831 PhnA domain AL533_01450 PF08274 PhnA Zinc-Ribbon AL533_01455 PF07411 Domain of unknown function (DUF1508) AL533_01460 PF03129 Anticodon binding domain AL533_01460 PF04073 Aminoacyl-tRNA editing domain AL533_01460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL533_01465 PF00873 AcrB/AcrD/AcrF family AL533_01480 PF00072 Response regulator receiver domain AL533_01485 PF00072 Response regulator receiver domain AL533_01490 PF01584 CheW-like domain AL533_01495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL533_01495 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AL533_01500 PF01584 CheW-like domain AL533_01500 PF00072 Response regulator receiver domain AL533_01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_01500 PF01627 Hpt domain AL533_01510 PF07687 Peptidase dimerisation domain AL533_01510 PF01546 Peptidase family M20/M25/M40 AL533_01525 PF04304 Protein of unknown function (DUF454) AL533_01530 PF17969 L,D-transpeptidase C-terminal domain AL533_01530 PF03734 L,D-transpeptidase catalytic domain AL533_01570 PF00175 Oxidoreductase NAD-binding domain AL533_01570 PF00667 FAD binding domain AL533_01570 PF00258 Flavodoxin AL533_01580 PF12805 FUSC-like inner membrane protein yccS AL533_01585 PF07690 Major Facilitator Superfamily AL533_01590 PF00881 Nitroreductase family AL533_01610 PF01235 Sodium:alanine symporter family AL533_01615 PF01734 Patatin-like phospholipase AL533_01620 PF13291 ACT domain AL533_01620 PF00291 Pyridoxal-phosphate dependent enzyme AL533_01625 PF05992 SbmA/BacA-like family AL533_01655 PF02637 GatB domain AL533_01655 PF02934 GatB/GatE catalytic domain AL533_01660 PF01425 Amidase AL533_01665 PF02686 Glu-tRNAGln amidotransferase C subunit AL533_01675 PF04085 rod shape-determining protein MreC AL533_01680 PF04093 rod shape-determining protein MreD AL533_01685 PF02545 Maf-like protein AL533_01690 PF10150 Ribonuclease E/G family AL533_01690 PF00575 S1 RNA binding domain AL533_01700 PF06974 Protein of unknown function (DUF1298) AL533_01700 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AL533_01705 PF01507 Phosphoadenosine phosphosulfate reductase family AL533_01720 PF02525 Flavodoxin-like fold AL533_01740 PF02673 Bacitracin resistance protein BacA AL533_01745 PF12833 Helix-turn-helix domain AL533_01745 PF06719 AraC-type transcriptional regulator N-terminus AL533_01750 PF08240 Alcohol dehydrogenase GroES-like domain AL533_01750 PF00698 Acyl transferase domain AL533_01750 PF09277 Erythronolide synthase, docking AL533_01750 PF16197 Ketoacyl-synthetase C-terminal extension AL533_01750 PF00109 Beta-ketoacyl synthase, N-terminal domain AL533_01750 PF02801 Beta-ketoacyl synthase, C-terminal domain AL533_01750 PF08659 KR domain AL533_01750 PF08990 Erythronolide synthase docking AL533_01750 PF00550 Phosphopantetheine attachment site AL533_01750 PF14765 Polyketide synthase dehydratase AL533_01755 PF01965 DJ-1/PfpI family AL533_01775 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AL533_01780 PF00293 NUDIX domain AL533_01780 PF09297 NADH pyrophosphatase zinc ribbon domain AL533_01785 PF00324 Amino acid permease AL533_01790 PF04303 PrpF protein AL533_01795 PF00348 Polyprenyl synthetase AL533_01800 PF04237 YjbR AL533_01805 PF01145 SPFH domain / Band 7 family AL533_01815 PF01734 Patatin-like phospholipase AL533_01835 PF08019 Phosphoethanolamine transferase EptA/EptB AL533_01835 PF00884 Sulfatase AL533_01840 PF00072 Response regulator receiver domain AL533_01840 PF00486 Transcriptional regulatory protein, C terminal AL533_01845 PF00512 His Kinase A (phospho-acceptor) domain AL533_01845 PF08521 Two-component sensor kinase N-terminal AL533_01845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_01855 PF00909 Ammonium Transporter Family AL533_01865 PF03466 LysR substrate binding domain AL533_01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_01885 PF10458 Valyl tRNA synthetase tRNA binding arm AL533_01885 PF08264 Anticodon-binding domain of tRNA AL533_01885 PF00133 tRNA synthetases class I (I, L, M and V) AL533_01895 PF00133 tRNA synthetases class I (I, L, M and V) AL533_01895 PF08264 Anticodon-binding domain of tRNA AL533_01895 PF10458 Valyl tRNA synthetase tRNA binding arm AL533_01915 PF01906 Putative heavy-metal-binding AL533_01920 PF01906 Putative heavy-metal-binding AL533_01925 PF02321 Outer membrane efflux protein AL533_01930 PF00873 AcrB/AcrD/AcrF family AL533_01935 PF00529 HlyD membrane-fusion protein of T1SS AL533_01935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL533_01940 PF01569 PAP2 superfamily AL533_01950 PF00348 Polyprenyl synthetase AL533_01960 PF00829 Ribosomal prokaryotic L21 protein AL533_01965 PF01016 Ribosomal L27 protein AL533_01970 PF03548 Outer membrane lipoprotein carrier protein LolA AL533_01980 PF02403 Seryl-tRNA synthetase N-terminal domain AL533_01980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL533_01985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL533_01985 PF10414 Sirohaem synthase dimerisation region AL533_01985 PF14824 Sirohaem biosynthesis protein central AL533_01990 PF00588 SpoU rRNA Methylase family AL533_01995 PF01638 HxlR-like helix-turn-helix AL533_02000 PF03358 NADPH-dependent FMN reductase AL533_02005 PF13520 Amino acid permease AL533_02010 PF00465 Iron-containing alcohol dehydrogenase AL533_02020 PF03099 Biotin/lipoate A/B protein ligase family AL533_02025 PF04359 Protein of unknown function (DUF493) AL533_02030 PF04539 Sigma-70 region 3 AL533_02030 PF04545 Sigma-70, region 4 AL533_02030 PF00140 Sigma-70 factor, region 1.2 AL533_02030 PF03979 Sigma-70 factor, region 1.1 AL533_02030 PF04546 Sigma-70, non-essential region AL533_02030 PF04542 Sigma-70 region 2 AL533_02055 PF00285 Citrate synthase, C-terminal domain AL533_02060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL533_02065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL533_02070 PF00890 FAD binding domain AL533_02070 PF02910 Fumarate reductase flavoprotein C-term AL533_02075 PF13085 2Fe-2S iron-sulfur cluster binding domain AL533_02090 PF00676 Dehydrogenase E1 component AL533_02090 PF16870 2-oxoglutarate dehydrogenase C-terminal AL533_02090 PF02779 Transketolase, pyrimidine binding domain AL533_02090 PF16078 2-oxoglutarate dehydrogenase N-terminus AL533_02095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL533_02095 PF00364 Biotin-requiring enzyme AL533_02095 PF02817 e3 binding domain AL533_02100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL533_02100 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_02105 PF00549 CoA-ligase AL533_02105 PF08442 ATP-grasp domain AL533_02110 PF00549 CoA-ligase AL533_02110 PF02629 CoA binding domain AL533_02115 PF00579 tRNA synthetases class I (W and Y) AL533_02120 PF05661 Protein of unknown function (DUF808) AL533_02125 PF04228 Putative neutral zinc metallopeptidase AL533_02130 PF00999 Sodium/hydrogen exchanger family AL533_02145 PF09587 Bacterial capsule synthesis protein PGA_cap AL533_02165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL533_02175 PF00582 Universal stress protein family AL533_02180 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_02185 PF01042 Endoribonuclease L-PSP AL533_02190 PF00440 Bacterial regulatory proteins, tetR family AL533_02195 PF01272 Transcription elongation factor, GreA/GreB, C-term AL533_02195 PF03449 Transcription elongation factor, N-terminal AL533_02200 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL533_02200 PF02142 MGS-like domain AL533_02200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL533_02205 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AL533_02205 PF00117 Glutamine amidotransferase class-I AL533_02225 PF01985 CRS1 / YhbY (CRM) domain AL533_02230 PF01728 FtsJ-like methyltransferase AL533_02235 PF01434 Peptidase family M41 AL533_02235 PF00004 ATPase family associated with various cellular activities (AAA) AL533_02235 PF06480 FtsH Extracellular AL533_02235 PF17862 AAA+ lid domain AL533_02240 PF00809 Pterin binding enzyme AL533_02260 PF16655 PhoD-like phosphatase, N-terminal domain AL533_02260 PF09423 PhoD-like phosphatase AL533_02275 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AL533_02275 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AL533_02290 PF00083 Sugar (and other) transporter AL533_02295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL533_02295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL533_02300 PF01266 FAD dependent oxidoreductase AL533_02300 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AL533_02305 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AL533_02305 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AL533_02310 PF00781 Diacylglycerol kinase catalytic domain AL533_02315 PF00149 Calcineurin-like phosphoesterase AL533_02320 PF00166 Chaperonin 10 Kd subunit AL533_02325 PF00118 TCP-1/cpn60 chaperonin family AL533_02330 PF01219 Prokaryotic diacylglycerol kinase AL533_02335 PF00753 Metallo-beta-lactamase superfamily AL533_02340 PF03009 Glycerophosphoryl diester phosphodiesterase family AL533_02345 PF00873 AcrB/AcrD/AcrF family AL533_02355 PF01435 Peptidase family M48 AL533_02360 PF01464 Transglycosylase SLT domain AL533_02370 PF01171 PP-loop family AL533_02380 PF01464 Transglycosylase SLT domain AL533_02380 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL533_02385 PF03449 Transcription elongation factor, N-terminal AL533_02385 PF01272 Transcription elongation factor, GreA/GreB, C-term AL533_02400 PF00501 AMP-binding enzyme AL533_02400 PF13193 AMP-binding enzyme C-terminal domain AL533_02400 PF00975 Thioesterase domain AL533_02400 PF00550 Phosphopantetheine attachment site AL533_02400 PF00668 Condensation domain AL533_02410 PF09857 Putative toxin of bacterial toxin-antitoxin pair AL533_02460 PF00440 Bacterial regulatory proteins, tetR family AL533_02465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL533_02470 PF00561 alpha/beta hydrolase fold AL533_02470 PF00364 Biotin-requiring enzyme AL533_02475 PF00561 alpha/beta hydrolase fold AL533_02490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL533_02490 PF00529 HlyD membrane-fusion protein of T1SS AL533_02495 PF00873 AcrB/AcrD/AcrF family AL533_02500 PF00881 Nitroreductase family AL533_02505 PF00106 short chain dehydrogenase AL533_02515 PF02595 Glycerate kinase family AL533_02520 PF00384 Molybdopterin oxidoreductase AL533_02530 PF02634 FdhD/NarQ family AL533_02540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL533_02540 PF11890 Domain of unknown function (DUF3410) AL533_02540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL533_02545 PF00152 tRNA synthetases class II (D, K and N) AL533_02555 PF18073 Rubredoxin metal binding domain AL533_02560 PF00324 Amino acid permease AL533_02565 PF00324 Amino acid permease AL533_02575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL533_02575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL533_02580 PF01678 Diaminopimelate epimerase AL533_02585 PF01810 LysE type translocator AL533_02590 PF02899 Phage integrase, N-terminal SAM-like domain AL533_02590 PF00589 Phage integrase family AL533_02595 PF01012 Electron transfer flavoprotein domain AL533_02600 PF01012 Electron transfer flavoprotein domain AL533_02600 PF00766 Electron transfer flavoprotein FAD-binding domain AL533_02610 PF00753 Metallo-beta-lactamase superfamily AL533_02610 PF16123 Hydroxyacylglutathione hydrolase C-terminus AL533_02615 PF03989 DNA gyrase C-terminal domain, beta-propeller AL533_02615 PF00521 DNA gyrase/topoisomerase IV, subunit A AL533_02620 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AL533_02630 PF00535 Glycosyl transferase family 2 AL533_02650 PF13533 Biotin-lipoyl like AL533_02660 PF00266 Aminotransferase class-V AL533_02670 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AL533_02680 PF12704 MacB-like periplasmic core domain AL533_02680 PF02687 FtsX-like permease family AL533_02685 PF00005 ABC transporter AL533_02690 PF00753 Metallo-beta-lactamase superfamily AL533_02690 PF03772 Competence protein AL533_02700 PF01343 Peptidase family S49 AL533_02700 PF06965 Na+/H+ antiporter 1 AL533_02705 PF12697 Alpha/beta hydrolase family AL533_02710 PF00551 Formyl transferase AL533_02715 PF00586 AIR synthase related protein, N-terminal domain AL533_02715 PF02769 AIR synthase related protein, C-terminal domain AL533_02720 PF01594 AI-2E family transporter AL533_02725 PF11638 DnaA N-terminal domain AL533_02725 PF08299 Bacterial dnaA protein helix-turn-helix AL533_02725 PF00308 Bacterial dnaA protein AL533_02755 PF00588 SpoU rRNA Methylase family AL533_02755 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL533_02760 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AL533_02770 PF00691 OmpA family AL533_02775 PF07676 WD40-like Beta Propeller Repeat AL533_02775 PF04052 TolB amino-terminal domain AL533_02785 PF02472 Biopolymer transport protein ExbD/TolR AL533_02790 PF01618 MotA/TolQ/ExbB proton channel family AL533_02795 PF03061 Thioesterase superfamily AL533_02800 PF01546 Peptidase family M20/M25/M40 AL533_02800 PF07687 Peptidase dimerisation domain AL533_02805 PF05491 RuvB C-terminal winged helix domain AL533_02805 PF17864 RuvB AAA lid domain AL533_02805 PF05496 Holliday junction DNA helicase RuvB P-loop domain AL533_02810 PF07499 RuvA, C-terminal domain AL533_02810 PF01330 RuvA N terminal domain AL533_02815 PF01966 HD domain AL533_02820 PF02769 AIR synthase related protein, C-terminal domain AL533_02820 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AL533_02820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AL533_02825 PF07690 Major Facilitator Superfamily AL533_02840 PF01784 NIF3 (NGG1p interacting factor 3) AL533_02845 PF00378 Enoyl-CoA hydratase/isomerase AL533_02850 PF00293 NUDIX domain AL533_02850 PF01467 Cytidylyltransferase-like AL533_02865 PF00578 AhpC/TSA family AL533_02880 PF06508 Queuosine biosynthesis protein QueC AL533_02885 PF04055 Radical SAM superfamily AL533_02890 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_02890 PF14602 Hexapeptide repeat of succinyl-transferase AL533_02890 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AL533_02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_02900 PF03466 LysR substrate binding domain AL533_02905 PF00005 ABC transporter AL533_02905 PF12857 TOBE-like domain AL533_02910 PF00528 Binding-protein-dependent transport system inner membrane component AL533_02915 PF00528 Binding-protein-dependent transport system inner membrane component AL533_02930 PF01063 Amino-transferase class IV AL533_02935 PF02618 YceG-like family AL533_02940 PF02223 Thymidylate kinase AL533_02950 PF02910 Fumarate reductase flavoprotein C-term AL533_02950 PF00890 FAD binding domain AL533_02955 PF13180 PDZ domain AL533_02965 PF00679 Elongation factor G C-terminus AL533_02965 PF06421 GTP-binding protein LepA C-terminus AL533_02965 PF00009 Elongation factor Tu GTP binding domain AL533_02965 PF03144 Elongation factor Tu domain 2 AL533_02970 PF10502 Signal peptidase, peptidase S26 AL533_02980 PF14622 Ribonuclease-III-like AL533_02980 PF00035 Double-stranded RNA binding motif AL533_02985 PF01926 50S ribosome-binding GTPase AL533_02985 PF07650 KH domain AL533_02995 PF02565 Recombination protein O C terminal AL533_02995 PF11967 Recombination protein O N terminal AL533_03000 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AL533_03005 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AL533_03010 PF00106 short chain dehydrogenase AL533_03050 PF17151 Periplasmic sensor domain AL533_03050 PF00990 Diguanylate cyclase, GGDEF domain AL533_03060 PF00271 Helicase conserved C-terminal domain AL533_03060 PF04851 Type III restriction enzyme, res subunit AL533_03060 PF17757 UvrB interaction domain AL533_03060 PF12344 Ultra-violet resistance protein B AL533_03060 PF02151 UvrB/uvrC motif AL533_03075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL533_03075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL533_03090 PF01018 GTP1/OBG AL533_03090 PF01926 50S ribosome-binding GTPase AL533_03095 PF01472 PUA domain AL533_03095 PF00696 Amino acid kinase family AL533_03105 PF07759 Protein of unknown function (DUF1615) AL533_03110 PF01207 Dihydrouridine synthase (Dus) AL533_03115 PF03060 Nitronate monooxygenase AL533_03130 PF02350 UDP-N-acetylglucosamine 2-epimerase AL533_03160 PF03441 FAD binding domain of DNA photolyase AL533_03160 PF00875 DNA photolyase AL533_03165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL533_03170 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_03175 PF07943 Penicillin-binding protein 5, C-terminal domain AL533_03175 PF00768 D-alanyl-D-alanine carboxypeptidase AL533_03185 PF03971 Monomeric isocitrate dehydrogenase AL533_03190 PF00849 RNA pseudouridylate synthase AL533_03195 PF00180 Isocitrate/isopropylmalate dehydrogenase AL533_03215 PF06779 Uncharacterised MFS-type transporter YbfB AL533_03220 PF03466 LysR substrate binding domain AL533_03220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_03230 PF02567 Phenazine biosynthesis-like protein AL533_03235 PF05193 Peptidase M16 inactive domain AL533_03235 PF00675 Insulinase (Peptidase family M16) AL533_03260 PF02581 Thiamine monophosphate synthase AL533_03265 PF00202 Aminotransferase class-III AL533_03275 PF00849 RNA pseudouridylate synthase AL533_03280 PF12137 RNA polymerase recycling family C-terminal AL533_03280 PF00176 SNF2 family N-terminal domain AL533_03280 PF00271 Helicase conserved C-terminal domain AL533_03280 PF18339 RapA N-terminal Tudor like domain 1 AL533_03280 PF18337 RapA N-terminal Tudor like domain AL533_03290 PF00440 Bacterial regulatory proteins, tetR family AL533_03295 PF00970 Oxidoreductase FAD-binding domain AL533_03295 PF00175 Oxidoreductase NAD-binding domain AL533_03295 PF00111 2Fe-2S iron-sulfur cluster binding domain AL533_03300 PF00487 Fatty acid desaturase AL533_03320 PF00202 Aminotransferase class-III AL533_03325 PF00282 Pyridoxal-dependent decarboxylase conserved domain AL533_03330 PF00171 Aldehyde dehydrogenase family AL533_03335 PF01037 Lrp/AsnC ligand binding domain AL533_03340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL533_03340 PF00205 Thiamine pyrophosphate enzyme, central domain AL533_03340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL533_03345 PF00324 Amino acid permease AL533_03350 PF12849 PBP superfamily domain AL533_03355 PF00528 Binding-protein-dependent transport system inner membrane component AL533_03360 PF00528 Binding-protein-dependent transport system inner membrane component AL533_03365 PF00005 ABC transporter AL533_03370 PF08496 Peptidase family S49 N-terminal AL533_03370 PF01343 Peptidase family S49 AL533_03385 PF09997 Predicted membrane protein (DUF2238) AL533_03390 PF08328 Adenylosuccinate lyase C-terminal AL533_03390 PF00206 Lyase AL533_03395 PF04356 Protein of unknown function (DUF489) AL533_03405 PF00293 NUDIX domain AL533_03410 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_03415 PF00768 D-alanyl-D-alanine carboxypeptidase AL533_03415 PF07943 Penicillin-binding protein 5, C-terminal domain AL533_03430 PF01975 Survival protein SurE AL533_03435 PF01551 Peptidase family M23 AL533_03435 PF01476 LysM domain AL533_03440 PF03466 LysR substrate binding domain AL533_03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_03445 PF05362 Lon protease (S16) C-terminal proteolytic domain AL533_03445 PF13654 AAA domain AL533_03450 PF07690 Major Facilitator Superfamily AL533_03455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL533_03460 PF13593 SBF-like CPA transporter family (DUF4137) AL533_03465 PF01197 Ribosomal protein L31 AL533_03470 PF12792 CSS motif domain associated with EAL AL533_03470 PF00563 EAL domain AL533_03480 PF04055 Radical SAM superfamily AL533_03485 PF01132 Elongation factor P (EF-P) OB domain AL533_03485 PF09285 Elongation factor P, C-terminal AL533_03485 PF08207 Elongation factor P (EF-P) KOW-like domain AL533_03490 PF13722 5TM C-terminal transporter carbon starvation CstA AL533_03490 PF02554 Carbon starvation protein CstA AL533_03495 PF04328 Selenoprotein, putative AL533_03535 PF00291 Pyridoxal-phosphate dependent enzyme AL533_03540 PF13309 HTH domain AL533_03540 PF08348 YheO-like PAS domain AL533_03545 PF17954 Quercetinase C-terminal cupin domain AL533_03545 PF02678 Pirin AL533_03560 PF01208 Uroporphyrinogen decarboxylase (URO-D) AL533_03565 PF05675 Protein of unknown function (DUF817) AL533_03580 PF00144 Beta-lactamase AL533_03590 PF00111 2Fe-2S iron-sulfur cluster binding domain AL533_03590 PF01799 [2Fe-2S] binding domain AL533_03595 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AL533_03595 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AL533_03605 PF01713 Smr domain AL533_03610 PF00218 Indole-3-glycerol phosphate synthase AL533_03615 PF02885 Glycosyl transferase family, helical bundle domain AL533_03615 PF00591 Glycosyl transferase family, a/b domain AL533_03620 PF00593 TonB dependent receptor AL533_03620 PF07715 TonB-dependent Receptor Plug Domain AL533_03625 PF01433 Peptidase family M1 domain AL533_03625 PF11838 ERAP1-like C-terminal domain AL533_03630 PF00117 Glutamine amidotransferase class-I AL533_03675 PF12684 PDDEXK-like domain of unknown function (DUF3799) AL533_03675 PF06630 Enterobacterial exodeoxyribonuclease VIII AL533_03720 PF14528 LAGLIDADG-like domain AL533_03720 PF00772 DnaB-like helicase N terminal domain AL533_03720 PF03796 DnaB-like helicase C terminal domain AL533_03905 PF00589 Phage integrase family AL533_03905 PF13356 Arm DNA-binding domain AL533_03915 PF00854 POT family AL533_03925 PF04345 Chorismate lyase AL533_03930 PF01040 UbiA prenyltransferase family AL533_03965 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL533_03965 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL533_03970 PF01784 NIF3 (NGG1p interacting factor 3) AL533_03975 PF13180 PDZ domain AL533_03980 PF01743 Poly A polymerase head domain AL533_03980 PF12627 Probable RNA and SrmB- binding site of polymerase A AL533_03985 PF03949 Malic enzyme, NAD binding domain AL533_03985 PF01515 Phosphate acetyl/butaryl transferase AL533_03985 PF00390 Malic enzyme, N-terminal domain AL533_03990 PF00563 EAL domain AL533_03990 PF03707 Bacterial signalling protein N terminal repeat AL533_03990 PF00990 Diguanylate cyclase, GGDEF domain AL533_03995 PF04452 RNA methyltransferase AL533_04000 PF02219 Methylenetetrahydrofolate reductase AL533_04005 PF05221 S-adenosyl-L-homocysteine hydrolase AL533_04005 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AL533_04020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_04020 PF09317 Domain of unknown function (DUF1974) AL533_04020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_04025 PF04055 Radical SAM superfamily AL533_04030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL533_04030 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_04040 PF07690 Major Facilitator Superfamily AL533_04050 PF00557 Metallopeptidase family M24 AL533_04055 PF00318 Ribosomal protein S2 AL533_04060 PF00889 Elongation factor TS AL533_04070 PF12833 Helix-turn-helix domain AL533_04090 PF05036 Sporulation related domain AL533_04090 PF03330 Lytic transglycolase AL533_04095 PF13406 Transglycosylase SLT domain AL533_04100 PF01098 Cell cycle protein AL533_04110 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AL533_04110 PF14489 QueF-like protein AL533_04115 PF01061 ABC-2 type transporter AL533_04120 PF00005 ABC transporter AL533_04145 PF00872 Transposase, Mutator family AL533_04195 PF00464 Serine hydroxymethyltransferase AL533_04200 PF02321 Outer membrane efflux protein AL533_04205 PF00873 AcrB/AcrD/AcrF family AL533_04210 PF13533 Biotin-lipoyl like AL533_04215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_04215 PF03466 LysR substrate binding domain AL533_04220 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL533_04225 PF00528 Binding-protein-dependent transport system inner membrane component AL533_04230 PF00528 Binding-protein-dependent transport system inner membrane component AL533_04235 PF00005 ABC transporter AL533_04240 PF00893 Small Multidrug Resistance protein AL533_04245 PF12838 4Fe-4S dicluster domain AL533_04255 PF00155 Aminotransferase class I and II AL533_04255 PF00392 Bacterial regulatory proteins, gntR family AL533_04260 PF02567 Phenazine biosynthesis-like protein AL533_04265 PF00970 Oxidoreductase FAD-binding domain AL533_04265 PF00175 Oxidoreductase NAD-binding domain AL533_04270 PF18389 TrmO C-terminal domain AL533_04270 PF01980 tRNA-methyltransferase O AL533_04280 PF00437 Type II/IV secretion system protein AL533_04285 PF04076 Bacterial OB fold (BOF) protein AL533_04290 PF00486 Transcriptional regulatory protein, C terminal AL533_04290 PF00072 Response regulator receiver domain AL533_04295 PF08521 Two-component sensor kinase N-terminal AL533_04295 PF00512 His Kinase A (phospho-acceptor) domain AL533_04295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_04305 PF00293 NUDIX domain AL533_04315 PF00912 Transglycosylase AL533_04315 PF14814 Bifunctional transglycosylase second domain AL533_04315 PF00905 Penicillin binding protein transpeptidase domain AL533_04320 PF01513 ATP-NAD kinase AL533_04325 PF07023 Protein of unknown function (DUF1315) AL533_04330 PF00591 Glycosyl transferase family, a/b domain AL533_04330 PF02885 Glycosyl transferase family, helical bundle domain AL533_04340 PF00375 Sodium:dicarboxylate symporter family AL533_04345 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_04345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_04345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_04355 PF00756 Putative esterase AL533_04360 PF01842 ACT domain AL533_04360 PF01817 Chorismate mutase type II AL533_04360 PF00800 Prephenate dehydratase AL533_04365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL533_04375 PF03781 Sulfatase-modifying factor enzyme 1 AL533_04380 PF07687 Peptidase dimerisation domain AL533_04380 PF01546 Peptidase family M20/M25/M40 AL533_04385 PF00753 Metallo-beta-lactamase superfamily AL533_04395 PF03883 Peroxide stress protein YaaA AL533_04400 PF05690 Thiazole biosynthesis protein ThiG AL533_04410 PF04241 Protein of unknown function (DUF423) AL533_04415 PF04545 Sigma-70, region 4 AL533_04415 PF00140 Sigma-70 factor, region 1.2 AL533_04415 PF04542 Sigma-70 region 2 AL533_04425 PF00313 'Cold-shock' DNA-binding domain AL533_04430 PF00270 DEAD/DEAH box helicase AL533_04430 PF00271 Helicase conserved C-terminal domain AL533_04440 PF00881 Nitroreductase family AL533_04445 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AL533_04445 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AL533_04465 PF01180 Dihydroorotate dehydrogenase AL533_04470 PF02674 Colicin V production protein AL533_04475 PF00156 Phosphoribosyl transferase domain AL533_04490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL533_04490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL533_04495 PF01435 Peptidase family M48 AL533_04500 PF09424 Yqey-like protein AL533_04505 PF01165 Ribosomal protein S21 AL533_04510 PF00814 Glycoprotease family AL533_04530 PF03793 PASTA domain AL533_04530 PF00069 Protein kinase domain AL533_04555 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AL533_04555 PF08479 POTRA domain, ShlB-type AL533_04555 PF17287 POTRA domain AL533_04565 PF00872 Transposase, Mutator family AL533_04580 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AL533_04635 PF03466 LysR substrate binding domain AL533_04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_04640 PF00202 Aminotransferase class-III AL533_04645 PF00171 Aldehyde dehydrogenase family AL533_04650 PF00324 Amino acid permease AL533_04670 PF13649 Methyltransferase domain AL533_04680 PF04076 Bacterial OB fold (BOF) protein AL533_04695 PF00561 alpha/beta hydrolase fold AL533_04700 PF03616 Sodium/glutamate symporter AL533_04705 PF00999 Sodium/hydrogen exchanger family AL533_04705 PF02254 TrkA-N domain AL533_04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_04770 PF03466 LysR substrate binding domain AL533_04775 PF12146 Serine aminopeptidase, S33 AL533_04785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_04785 PF03466 LysR substrate binding domain AL533_04795 PF06719 AraC-type transcriptional regulator N-terminus AL533_04795 PF12833 Helix-turn-helix domain AL533_04830 PF04403 Paraquat-inducible protein A AL533_04835 PF02470 MlaD protein AL533_04845 PF00576 HIUase/Transthyretin family AL533_04860 PF00512 His Kinase A (phospho-acceptor) domain AL533_04860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_04860 PF00672 HAMP domain AL533_04900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_04900 PF08521 Two-component sensor kinase N-terminal AL533_04900 PF00512 His Kinase A (phospho-acceptor) domain AL533_04905 PF00486 Transcriptional regulatory protein, C terminal AL533_04905 PF00072 Response regulator receiver domain AL533_04925 PF00892 EamA-like transporter family AL533_04930 PF07995 Glucose / Sorbosone dehydrogenase AL533_04940 PF02798 Glutathione S-transferase, N-terminal domain AL533_04940 PF00043 Glutathione S-transferase, C-terminal domain AL533_04955 PF00375 Sodium:dicarboxylate symporter family AL533_04965 PF00753 Metallo-beta-lactamase superfamily AL533_04965 PF16123 Hydroxyacylglutathione hydrolase C-terminus AL533_04970 PF00528 Binding-protein-dependent transport system inner membrane component AL533_04975 PF09383 NIL domain AL533_04975 PF00005 ABC transporter AL533_04980 PF03180 NLPA lipoprotein AL533_04990 PF02844 Phosphoribosylglycinamide synthetase, N domain AL533_04990 PF02843 Phosphoribosylglycinamide synthetase, C domain AL533_04990 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AL533_04995 PF02142 MGS-like domain AL533_04995 PF01808 AICARFT/IMPCHase bienzyme AL533_05000 PF02954 Bacterial regulatory protein, Fis family AL533_05020 PF13932 GidA associated domain AL533_05020 PF01134 Glucose inhibited division protein A AL533_05030 PF14403 Circularly permuted ATP-grasp type 2 AL533_05040 PF08379 Bacterial transglutaminase-like N-terminal region AL533_05040 PF01841 Transglutaminase-like superfamily AL533_05050 PF00842 Alanine racemase, C-terminal domain AL533_05050 PF01168 Alanine racemase, N-terminal domain AL533_05055 PF03796 DnaB-like helicase C terminal domain AL533_05055 PF00772 DnaB-like helicase N terminal domain AL533_05060 PF03948 Ribosomal protein L9, C-terminal domain AL533_05060 PF01281 Ribosomal protein L9, N-terminal domain AL533_05065 PF01084 Ribosomal protein S18 AL533_05070 PF01250 Ribosomal protein S6 AL533_05075 PF01040 UbiA prenyltransferase family AL533_05080 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AL533_05085 PF00510 Cytochrome c oxidase subunit III AL533_05090 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL533_05095 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL533_05095 PF06481 COX Aromatic Rich Motif AL533_05105 PF00391 PEP-utilising enzyme, mobile domain AL533_05105 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AL533_05105 PF02896 PEP-utilising enzyme, TIM barrel domain AL533_05110 PF03618 Kinase/pyrophosphorylase AL533_05120 PF14883 Hypothetical glycosyl hydrolase family 13 AL533_05120 PF01522 Polysaccharide deacetylase AL533_05125 PF00535 Glycosyl transferase family 2 AL533_05130 PF13994 PgaD-like protein AL533_05140 PF00296 Luciferase-like monooxygenase AL533_05160 PF03466 LysR substrate binding domain AL533_05160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_05170 PF00872 Transposase, Mutator family AL533_05175 PF03462 PCRF domain AL533_05175 PF00472 RF-1 domain AL533_05180 PF13847 Methyltransferase domain AL533_05180 PF17827 PrmC N-terminal domain AL533_05185 PF00528 Binding-protein-dependent transport system inner membrane component AL533_05190 PF09084 NMT1/THI5 like AL533_05195 PF12833 Helix-turn-helix domain AL533_05200 PF00106 short chain dehydrogenase AL533_05205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_05205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_05205 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_05210 PF13193 AMP-binding enzyme C-terminal domain AL533_05210 PF00501 AMP-binding enzyme AL533_05215 PF01613 Flavin reductase like domain AL533_05220 PF00899 ThiF family AL533_05225 PF03109 ABC1 family AL533_05240 PF03814 Potassium-transporting ATPase A subunit AL533_05250 PF02669 K+-transporting ATPase, c chain AL533_05255 PF13493 Domain of unknown function (DUF4118) AL533_05255 PF00512 His Kinase A (phospho-acceptor) domain AL533_05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_05255 PF02702 Osmosensitive K+ channel His kinase sensor domain AL533_05260 PF00072 Response regulator receiver domain AL533_05260 PF00486 Transcriptional regulatory protein, C terminal AL533_05265 PF00120 Glutamine synthetase, catalytic domain AL533_05275 PF03232 Ubiquinone biosynthesis protein COQ7 AL533_05280 PF07690 Major Facilitator Superfamily AL533_05285 PF07244 Surface antigen variable number repeat AL533_05285 PF01103 Surface antigen AL533_05285 PF17243 POTRA domain TamA domain 1 AL533_05305 PF06434 Aconitate hydratase 2 N-terminus AL533_05305 PF11791 Aconitate B N-terminal domain AL533_05305 PF00330 Aconitase family (aconitate hydratase) AL533_05315 PF00027 Cyclic nucleotide-binding domain AL533_05315 PF00520 Ion transport protein AL533_05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_05325 PF03466 LysR substrate binding domain AL533_05330 PF04284 Protein of unknown function (DUF441) AL533_05340 PF00849 RNA pseudouridylate synthase AL533_05340 PF01479 S4 domain AL533_05355 PF00849 RNA pseudouridylate synthase AL533_05355 PF01479 S4 domain AL533_05360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AL533_05365 PF01119 DNA mismatch repair protein, C-terminal domain AL533_05365 PF08676 MutL C terminal dimerisation domain AL533_05375 PF17209 Hfq protein AL533_05385 PF00881 Nitroreductase family AL533_05395 PF00149 Calcineurin-like phosphoesterase AL533_05400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL533_05405 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL533_05405 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AL533_05410 PF00117 Glutamine amidotransferase class-I AL533_05410 PF02540 NAD synthase AL533_05410 PF00958 GMP synthase C terminal domain AL533_05415 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AL533_05420 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AL533_05425 PF13520 Amino acid permease AL533_05430 PF00171 Aldehyde dehydrogenase family AL533_05445 PF00465 Iron-containing alcohol dehydrogenase AL533_05450 PF05970 PIF1-like helicase AL533_05450 PF14493 Helix-turn-helix domain AL533_05460 PF02110 Hydroxyethylthiazole kinase family AL533_05475 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AL533_05475 PF01433 Peptidase family M1 domain AL533_05475 PF11940 Domain of unknown function (DUF3458) Ig-like fold AL533_05490 PF13954 PapC N-terminal domain AL533_05490 PF00577 Outer membrane usher protein AL533_05490 PF13953 PapC C-terminal domain AL533_05515 PF01817 Chorismate mutase type II AL533_05520 PF01037 Lrp/AsnC ligand binding domain AL533_05540 PF00593 TonB dependent receptor AL533_05540 PF07715 TonB-dependent Receptor Plug Domain AL533_05545 PF03328 HpcH/HpaI aldolase/citrate lyase family AL533_05550 PF06276 Ferric iron reductase FhuF-like transporter AL533_05550 PF04183 IucA / IucC family AL533_05555 PF07690 Major Facilitator Superfamily AL533_05560 PF06276 Ferric iron reductase FhuF-like transporter AL533_05560 PF04183 IucA / IucC family AL533_05565 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL533_05570 PF00291 Pyridoxal-phosphate dependent enzyme AL533_05575 PF00924 Mechanosensitive ion channel AL533_05620 PF00005 ABC transporter AL533_05620 PF12848 ABC transporter AL533_05620 PF16326 ABC transporter C-terminal domain AL533_05625 PF00582 Universal stress protein family AL533_05640 PF00689 Cation transporting ATPase, C-terminus AL533_05640 PF00690 Cation transporter/ATPase, N-terminus AL533_05645 PF02308 MgtC family AL533_05650 PF03594 Benzoate membrane transport protein AL533_05655 PF01037 Lrp/AsnC ligand binding domain AL533_05660 PF01810 LysE type translocator AL533_05665 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL533_05665 PF13202 EF hand AL533_05670 PF03466 LysR substrate binding domain AL533_05670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_05680 PF02803 Thiolase, C-terminal domain AL533_05680 PF00108 Thiolase, N-terminal domain AL533_05705 PF07690 Major Facilitator Superfamily AL533_05720 PF12170 DNA polymerase III tau subunit V interacting with alpha AL533_05720 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AL533_05720 PF12169 DNA polymerase III subunits gamma and tau domain III AL533_05725 PF04185 Phosphoesterase family AL533_05725 PF05506 Domain of unknown function (DUF756) AL533_05730 PF03061 Thioesterase superfamily AL533_05735 PF00465 Iron-containing alcohol dehydrogenase AL533_05745 PF00857 Isochorismatase family AL533_05750 PF01638 HxlR-like helix-turn-helix AL533_05760 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL533_05765 PF01565 FAD binding domain AL533_05765 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AL533_05790 PF01645 Conserved region in glutamate synthase AL533_05840 PF00872 Transposase, Mutator family AL533_06000 PF06381 Protein of unknown function (DUF1073) AL533_06015 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) AL533_06095 PF00149 Calcineurin-like phosphoesterase AL533_06125 PF13438 Domain of unknown function (DUF4113) AL533_06125 PF00817 impB/mucB/samB family AL533_06125 PF11799 impB/mucB/samB family C-terminal domain AL533_06130 PF00717 Peptidase S24-like AL533_06145 PF12832 MFS_1 like family AL533_06155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL533_06155 PF00289 Biotin carboxylase, N-terminal domain AL533_06155 PF02785 Biotin carboxylase C-terminal domain AL533_06160 PF00364 Biotin-requiring enzyme AL533_06165 PF01220 Dehydroquinase class II AL533_06170 PF13438 Domain of unknown function (DUF4113) AL533_06170 PF00817 impB/mucB/samB family AL533_06170 PF11799 impB/mucB/samB family C-terminal domain AL533_06180 PF00005 ABC transporter AL533_06185 PF00072 Response regulator receiver domain AL533_06185 PF00486 Transcriptional regulatory protein, C terminal AL533_06195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL533_06195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL533_06195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_06195 PF04324 BFD-like [2Fe-2S] binding domain AL533_06195 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL533_06195 PF13806 Rieske-like [2Fe-2S] domain AL533_06200 PF04324 BFD-like [2Fe-2S] binding domain AL533_06200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL533_06200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL533_06200 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_06200 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL533_06205 PF01568 Molydopterin dinucleotide binding domain AL533_06205 PF04324 BFD-like [2Fe-2S] binding domain AL533_06205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL533_06205 PF00384 Molybdopterin oxidoreductase AL533_06210 PF12804 MobA-like NTP transferase domain AL533_06215 PF01568 Molydopterin dinucleotide binding domain AL533_06215 PF00384 Molybdopterin oxidoreductase AL533_06215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL533_06220 PF06463 Molybdenum Cofactor Synthesis C AL533_06220 PF04055 Radical SAM superfamily AL533_06230 PF02391 MoaE protein AL533_06235 PF00994 Probable molybdopterin binding domain AL533_06235 PF01967 MoaC family AL533_06240 PF03453 MoeA N-terminal region (domain I and II) AL533_06240 PF03454 MoeA C-terminal region (domain IV) AL533_06240 PF00994 Probable molybdopterin binding domain AL533_06245 PF01638 HxlR-like helix-turn-helix AL533_06250 PF00392 Bacterial regulatory proteins, gntR family AL533_06250 PF00155 Aminotransferase class I and II AL533_06255 PF00892 EamA-like transporter family AL533_06275 PF02635 DsrE/DsrF-like family AL533_06280 PF16363 GDP-mannose 4,6 dehydratase AL533_06285 PF00206 Lyase AL533_06285 PF10415 Fumarase C C-terminus AL533_06310 PF01266 FAD dependent oxidoreductase AL533_06320 PF02542 YgbB family AL533_06330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL533_06330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL533_06335 PF00440 Bacterial regulatory proteins, tetR family AL533_06340 PF02954 Bacterial regulatory protein, Fis family AL533_06340 PF00158 Sigma-54 interaction domain AL533_06340 PF00072 Response regulator receiver domain AL533_06345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_06345 PF00512 His Kinase A (phospho-acceptor) domain AL533_06345 PF00989 PAS fold AL533_06355 PF00919 Uncharacterized protein family UPF0004 AL533_06355 PF04055 Radical SAM superfamily AL533_06355 PF18693 TRAM domain AL533_06360 PF00696 Amino acid kinase family AL533_06365 PF01765 Ribosome recycling factor AL533_06370 PF01255 Putative undecaprenyl diphosphate synthase AL533_06380 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AL533_06380 PF13288 DXP reductoisomerase C-terminal domain AL533_06380 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AL533_06385 PF02163 Peptidase family M50 AL533_06385 PF17820 PDZ domain AL533_06385 PF13180 PDZ domain AL533_06390 PF07244 Surface antigen variable number repeat AL533_06390 PF01103 Surface antigen AL533_06400 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_06400 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AL533_06405 PF07977 FabA-like domain AL533_06410 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_06410 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AL533_06425 PF02631 RecX family AL533_06430 PF00154 recA bacterial DNA recombination protein AL533_06435 PF01479 S4 domain AL533_06440 PF13419 Haloacid dehalogenase-like hydrolase AL533_06460 PF01037 Lrp/AsnC ligand binding domain AL533_06465 PF00266 Aminotransferase class-V AL533_06470 PF00324 Amino acid permease AL533_06480 PF00082 Subtilase family AL533_06480 PF05922 Peptidase inhibitor I9 AL533_06485 PF00916 Sulfate permease family AL533_06485 PF01740 STAS domain AL533_06490 PF02586 SOS response associated peptidase (SRAP) AL533_06495 PF07995 Glucose / Sorbosone dehydrogenase AL533_06505 PF03707 Bacterial signalling protein N terminal repeat AL533_06505 PF00563 EAL domain AL533_06505 PF00990 Diguanylate cyclase, GGDEF domain AL533_06520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL533_06520 PF02378 Phosphotransferase system, EIIC AL533_06525 PF00294 pfkB family carbohydrate kinase AL533_06530 PF05524 PEP-utilising enzyme, N-terminal AL533_06530 PF02896 PEP-utilising enzyme, TIM barrel domain AL533_06530 PF00381 PTS HPr component phosphorylation site AL533_06530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL533_06530 PF00391 PEP-utilising enzyme, mobile domain AL533_06555 PF05525 Branched-chain amino acid transport protein AL533_06560 PF00557 Metallopeptidase family M24 AL533_06565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_06565 PF03466 LysR substrate binding domain AL533_06575 PF00462 Glutaredoxin AL533_06580 PF00202 Aminotransferase class-III AL533_06585 PF00478 IMP dehydrogenase / GMP reductase domain AL533_06585 PF00571 CBS domain AL533_06610 PF00448 SRP54-type protein, GTPase domain AL533_06610 PF02881 SRP54-type protein, helical bundle domain AL533_06620 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL533_06635 PF08173 Membrane bound YbgT-like protein AL533_06640 PF02322 Cytochrome bd terminal oxidase subunit II AL533_06645 PF01654 Cytochrome bd terminal oxidase subunit I AL533_06655 PF07290 Protein of unknown function (DUF1449) AL533_06665 PF00294 pfkB family carbohydrate kinase AL533_06670 PF07715 TonB-dependent Receptor Plug Domain AL533_06670 PF00593 TonB dependent receptor AL533_06675 PF08367 Peptidase M16C associated AL533_06675 PF00675 Insulinase (Peptidase family M16) AL533_06675 PF05193 Peptidase M16 inactive domain AL533_06680 PF02253 Phospholipase A1 AL533_06685 PF02386 Cation transport protein AL533_06690 PF02080 TrkA-C domain AL533_06690 PF02254 TrkA-N domain AL533_06695 PF00585 C-terminal regulatory domain of Threonine dehydratase AL533_06695 PF00291 Pyridoxal-phosphate dependent enzyme AL533_06700 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AL533_06715 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL533_06715 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL533_06725 PF02617 ATP-dependent Clp protease adaptor protein ClpS AL533_06730 PF10431 C-terminal, D2-small domain, of ClpB protein AL533_06730 PF07724 AAA domain (Cdc48 subfamily) AL533_06730 PF17871 AAA lid domain AL533_06730 PF02861 Clp amino terminal domain, pathogenicity island component AL533_06730 PF00004 ATPase family associated with various cellular activities (AAA) AL533_06735 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AL533_06740 PF00793 DAHP synthetase I family AL533_06755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL533_06755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_06780 PF00117 Glutamine amidotransferase class-I AL533_06780 PF06418 CTP synthase N-terminus AL533_06785 PF00793 DAHP synthetase I family AL533_06790 PF00113 Enolase, C-terminal TIM barrel domain AL533_06790 PF03952 Enolase, N-terminal domain AL533_06795 PF04239 Protein of unknown function (DUF421) AL533_06805 PF04977 Septum formation initiator AL533_06810 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AL533_06815 PF01144 Coenzyme A transferase AL533_06820 PF01144 Coenzyme A transferase AL533_06825 PF02803 Thiolase, C-terminal domain AL533_06825 PF00108 Thiolase, N-terminal domain AL533_06830 PF00206 Lyase AL533_06830 PF10397 Adenylosuccinate lyase C-terminus AL533_06835 PF00561 alpha/beta hydrolase fold AL533_06840 PF07690 Major Facilitator Superfamily AL533_06845 PF02627 Carboxymuconolactone decarboxylase family AL533_06850 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AL533_06850 PF00775 Dioxygenase AL533_06855 PF00775 Dioxygenase AL533_06860 PF01487 Type I 3-dehydroquinase AL533_06865 PF05048 Periplasmic copper-binding protein (NosD) AL533_06870 PF04966 Carbohydrate-selective porin, OprB family AL533_06875 PF13360 PQQ-like domain AL533_06875 PF01011 PQQ enzyme repeat AL533_06885 PF04143 Sulphur transport AL533_06895 PF00753 Metallo-beta-lactamase superfamily AL533_06900 PF09339 IclR helix-turn-helix domain AL533_06900 PF01614 Bacterial transcriptional regulator AL533_06905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_06905 PF03466 LysR substrate binding domain AL533_06910 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_06910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_06910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_06925 PF00106 short chain dehydrogenase AL533_06935 PF07690 Major Facilitator Superfamily AL533_06945 PF01425 Amidase AL533_06950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AL533_06965 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AL533_06965 PF00355 Rieske [2Fe-2S] domain AL533_06980 PF00111 2Fe-2S iron-sulfur cluster binding domain AL533_06980 PF00175 Oxidoreductase NAD-binding domain AL533_06985 PF01613 Flavin reductase like domain AL533_06990 PF02311 AraC-like ligand binding domain AL533_06990 PF12833 Helix-turn-helix domain AL533_06995 PF02728 Copper amine oxidase, N3 domain AL533_06995 PF02727 Copper amine oxidase, N2 domain AL533_06995 PF07833 Copper amine oxidase N-terminal domain AL533_06995 PF01179 Copper amine oxidase, enzyme domain AL533_07005 PF00171 Aldehyde dehydrogenase family AL533_07010 PF12146 Serine aminopeptidase, S33 AL533_07015 PF00108 Thiolase, N-terminal domain AL533_07015 PF02803 Thiolase, C-terminal domain AL533_07025 PF01144 Coenzyme A transferase AL533_07030 PF01144 Coenzyme A transferase AL533_07035 PF04444 Catechol dioxygenase N terminus AL533_07035 PF00775 Dioxygenase AL533_07040 PF02426 Muconolactone delta-isomerase AL533_07045 PF13378 Enolase C-terminal domain-like AL533_07045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AL533_07050 PF03466 LysR substrate binding domain AL533_07050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_07060 PF00392 Bacterial regulatory proteins, gntR family AL533_07060 PF07729 FCD domain AL533_07065 PF00920 Dehydratase family AL533_07070 PF07690 Major Facilitator Superfamily AL533_07080 PF00171 Aldehyde dehydrogenase family AL533_07090 PF00561 alpha/beta hydrolase fold AL533_07095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_07095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL533_07100 PF00106 short chain dehydrogenase AL533_07105 PF01872 RibD C-terminal domain AL533_07115 PF13411 MerR HTH family regulatory protein AL533_07125 PF12706 Beta-lactamase superfamily domain AL533_07130 PF08359 YsiA-like protein, C-terminal region AL533_07130 PF00440 Bacterial regulatory proteins, tetR family AL533_07145 PF16295 Tetracyclin repressor-like, C-terminal domain AL533_07145 PF00440 Bacterial regulatory proteins, tetR family AL533_07150 PF17287 POTRA domain AL533_07150 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AL533_07150 PF08479 POTRA domain, ShlB-type AL533_07155 PF13018 Extended Signal Peptide of Type V secretion system AL533_07155 PF04829 Pre-toxin domain with VENN motif AL533_07155 PF05860 haemagglutination activity domain AL533_07155 PF13332 Hemagglutinin repeat AL533_07180 PF07690 Major Facilitator Superfamily AL533_07185 PF04909 Amidohydrolase AL533_07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_07200 PF03466 LysR substrate binding domain AL533_07215 PF04650 YSIRK type signal peptide AL533_07215 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AL533_07215 PF00746 LPXTG cell wall anchor motif AL533_07215 PF17961 Bacterial Ig domain AL533_07215 PF17210 SdrD B-like domain AL533_07220 PF00529 HlyD membrane-fusion protein of T1SS AL533_07220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL533_07235 PF00171 Aldehyde dehydrogenase family AL533_07240 PF00920 Dehydratase family AL533_07250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_07250 PF03466 LysR substrate binding domain AL533_07255 PF01370 NAD dependent epimerase/dehydratase family AL533_07260 PF07690 Major Facilitator Superfamily AL533_07265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL533_07265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL533_07270 PF06719 AraC-type transcriptional regulator N-terminus AL533_07270 PF12833 Helix-turn-helix domain AL533_07285 PF08240 Alcohol dehydrogenase GroES-like domain AL533_07285 PF00107 Zinc-binding dehydrogenase AL533_07310 PF00005 ABC transporter AL533_07330 PF14572 Phosphoribosyl synthetase-associated domain AL533_07330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AL533_07335 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AL533_07350 PF13533 Biotin-lipoyl like AL533_07355 PF07690 Major Facilitator Superfamily AL533_07380 PF01975 Survival protein SurE AL533_07390 PF02824 TGS domain AL533_07390 PF13291 ACT domain AL533_07390 PF04607 Region found in RelA / SpoT proteins AL533_07430 PF13673 Acetyltransferase (GNAT) domain AL533_07460 PF07681 DoxX AL533_07465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_07465 PF03466 LysR substrate binding domain AL533_07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_07470 PF00512 His Kinase A (phospho-acceptor) domain AL533_07470 PF16527 Two-component sensor protein CpxA, periplasmic domain AL533_07470 PF00672 HAMP domain AL533_07475 PF00486 Transcriptional regulatory protein, C terminal AL533_07475 PF00072 Response regulator receiver domain AL533_07480 PF00529 HlyD membrane-fusion protein of T1SS AL533_07480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL533_07485 PF00873 AcrB/AcrD/AcrF family AL533_07490 PF02321 Outer membrane efflux protein AL533_07495 PF12146 Serine aminopeptidase, S33 AL533_07500 PF00743 Flavin-binding monooxygenase-like AL533_07510 PF01266 FAD dependent oxidoreductase AL533_07640 PF16970 Type-1 fimbrial protein, A AL533_07645 PF02753 Pili assembly chaperone PapD, C-terminal domain AL533_07645 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AL533_07650 PF13953 PapC C-terminal domain AL533_07650 PF13954 PapC N-terminal domain AL533_07650 PF00577 Outer membrane usher protein AL533_07665 PF08240 Alcohol dehydrogenase GroES-like domain AL533_07665 PF00107 Zinc-binding dehydrogenase AL533_07675 PF00199 Catalase AL533_07690 PF13091 PLD-like domain AL533_07710 PF01244 Membrane dipeptidase (Peptidase family M19) AL533_07715 PF13186 Iron-sulfur cluster-binding domain AL533_07715 PF04055 Radical SAM superfamily AL533_07720 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AL533_07725 PF03070 TENA/THI-4/PQQC family AL533_07730 PF12706 Beta-lactamase superfamily domain AL533_07735 PF08042 PqqA family AL533_07740 PF17941 Polyphosphate kinase C-terminal domain 1 AL533_07740 PF13090 Polyphosphate kinase C-terminal domain 2 AL533_07740 PF02503 Polyphosphate kinase middle domain AL533_07740 PF13089 Polyphosphate kinase N-terminal domain AL533_07745 PF00149 Calcineurin-like phosphoesterase AL533_07755 PF00593 TonB dependent receptor AL533_07755 PF07715 TonB-dependent Receptor Plug Domain AL533_07760 PF00873 AcrB/AcrD/AcrF family AL533_07765 PF00550 Phosphopantetheine attachment site AL533_07765 PF00857 Isochorismatase family AL533_07770 PF13193 AMP-binding enzyme C-terminal domain AL533_07770 PF00501 AMP-binding enzyme AL533_07775 PF00425 chorismate binding enzyme AL533_07780 PF00106 short chain dehydrogenase AL533_07790 PF03621 MbtH-like protein AL533_07795 PF00668 Condensation domain AL533_07795 PF00975 Thioesterase domain AL533_07795 PF13193 AMP-binding enzyme C-terminal domain AL533_07795 PF00501 AMP-binding enzyme AL533_07795 PF00550 Phosphopantetheine attachment site AL533_07800 PF05977 Transmembrane secretion effector AL533_07825 PF03459 TOBE domain AL533_07825 PF00005 ABC transporter AL533_07830 PF00528 Binding-protein-dependent transport system inner membrane component AL533_07840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_07840 PF03459 TOBE domain AL533_07845 PF00355 Rieske [2Fe-2S] domain AL533_07845 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AL533_07850 PF00866 Ring hydroxylating beta subunit AL533_07855 PF00175 Oxidoreductase NAD-binding domain AL533_07855 PF00970 Oxidoreductase FAD-binding domain AL533_07855 PF00111 2Fe-2S iron-sulfur cluster binding domain AL533_07860 PF14525 AraC-binding-like domain AL533_07860 PF12833 Helix-turn-helix domain AL533_07870 PF01613 Flavin reductase like domain AL533_07885 PF01738 Dienelactone hydrolase family AL533_07890 PF07690 Major Facilitator Superfamily AL533_07895 PF06719 AraC-type transcriptional regulator N-terminus AL533_07895 PF12833 Helix-turn-helix domain AL533_07910 PF00753 Metallo-beta-lactamase superfamily AL533_07940 PF03466 LysR substrate binding domain AL533_07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_07945 PF01144 Coenzyme A transferase AL533_07950 PF01144 Coenzyme A transferase AL533_07955 PF02667 Short chain fatty acid transporter AL533_07960 PF02803 Thiolase, C-terminal domain AL533_07960 PF00108 Thiolase, N-terminal domain AL533_07965 PF03466 LysR substrate binding domain AL533_07965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_07970 PF03466 LysR substrate binding domain AL533_07970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_07985 PF00206 Lyase AL533_07985 PF10415 Fumarase C C-terminus AL533_07990 PF07715 TonB-dependent Receptor Plug Domain AL533_07990 PF00593 TonB dependent receptor AL533_07995 PF00083 Sugar (and other) transporter AL533_08010 PF00005 ABC transporter AL533_08015 PF00528 Binding-protein-dependent transport system inner membrane component AL533_08020 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL533_08045 PF02525 Flavodoxin-like fold AL533_08050 PF01638 HxlR-like helix-turn-helix AL533_08055 PF12833 Helix-turn-helix domain AL533_08055 PF06445 GyrI-like small molecule binding domain AL533_08070 PF01925 Sulfite exporter TauE/SafE AL533_08075 PF04273 Putative phosphatase (DUF442) AL533_08075 PF00753 Metallo-beta-lactamase superfamily AL533_08080 PF04273 Putative phosphatase (DUF442) AL533_08080 PF00753 Metallo-beta-lactamase superfamily AL533_08085 PF00072 Response regulator receiver domain AL533_08085 PF02954 Bacterial regulatory protein, Fis family AL533_08085 PF00158 Sigma-54 interaction domain AL533_08090 PF01062 Bestrophin, RFP-TM, chloride channel AL533_08095 PF00107 Zinc-binding dehydrogenase AL533_08095 PF08240 Alcohol dehydrogenase GroES-like domain AL533_08100 PF00106 short chain dehydrogenase AL533_08105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL533_08105 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_08110 PF02817 e3 binding domain AL533_08110 PF00364 Biotin-requiring enzyme AL533_08110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL533_08115 PF02779 Transketolase, pyrimidine binding domain AL533_08115 PF02780 Transketolase, C-terminal domain AL533_08120 PF00676 Dehydrogenase E1 component AL533_08125 PF04055 Radical SAM superfamily AL533_08155 PF01264 Chorismate synthase AL533_08160 PF05175 Methyltransferase small domain AL533_08165 PF00291 Pyridoxal-phosphate dependent enzyme AL533_08175 PF17862 AAA+ lid domain AL533_08175 PF01434 Peptidase family M41 AL533_08175 PF00004 ATPase family associated with various cellular activities (AAA) AL533_08185 PF05166 YcgL domain AL533_08205 PF00570 HRDC domain AL533_08205 PF01612 3'-5' exonuclease AL533_08210 PF13662 Toprim domain AL533_08210 PF02132 RecR protein AL533_08215 PF02575 YbaB/EbfC DNA-binding family AL533_08225 PF01053 Cys/Met metabolism PLP-dependent enzyme AL533_08230 PF00561 alpha/beta hydrolase fold AL533_08235 PF08241 Methyltransferase domain AL533_08265 PF01230 HIT domain AL533_08300 PF00005 ABC transporter AL533_08305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL533_08315 PF02684 Lipid-A-disaccharide synthetase AL533_08320 PF00593 TonB dependent receptor AL533_08320 PF07715 TonB-dependent Receptor Plug Domain AL533_08340 PF01925 Sulfite exporter TauE/SafE AL533_08345 PF00793 DAHP synthetase I family AL533_08355 PF00593 TonB dependent receptor AL533_08355 PF07715 TonB-dependent Receptor Plug Domain AL533_08360 PF02654 Cobalamin-5-phosphate synthase AL533_08370 PF00300 Histidine phosphatase superfamily (branch 1) AL533_08375 PF02277 Phosphoribosyltransferase AL533_08380 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AL533_08400 PF04073 Aminoacyl-tRNA editing domain AL533_08410 PF03109 ABC1 family AL533_08415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_08415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_08415 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_08420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_08420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_08420 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_08425 PF00487 Fatty acid desaturase AL533_08430 PF12833 Helix-turn-helix domain AL533_08430 PF12852 Cupin AL533_08435 PF09312 SurA N-terminal domain AL533_08435 PF00639 PPIC-type PPIASE domain AL533_08440 PF00216 Bacterial DNA-binding protein AL533_08455 PF02082 Transcriptional regulator AL533_08460 PF00266 Aminotransferase class-V AL533_08465 PF01592 NifU-like N terminal domain AL533_08470 PF01521 Iron-sulphur cluster biosynthesis AL533_08475 PF07743 HSCB C-terminal oligomerisation domain AL533_08475 PF00226 DnaJ domain AL533_08480 PF00012 Hsp70 protein AL533_08485 PF00111 2Fe-2S iron-sulfur cluster binding domain AL533_08490 PF00211 Adenylate and Guanylate cyclase catalytic domain AL533_08500 PF02559 CarD-like/TRCF domain AL533_08500 PF17757 UvrB interaction domain AL533_08500 PF03461 TRCF domain AL533_08500 PF00271 Helicase conserved C-terminal domain AL533_08500 PF00270 DEAD/DEAH box helicase AL533_08520 PF03737 Aldolase/RraA AL533_08525 PF13460 NAD(P)H-binding AL533_08530 PF01649 Ribosomal protein S20 AL533_08540 PF00459 Inositol monophosphatase family AL533_08555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL533_08555 PF00005 ABC transporter AL533_08560 PF00528 Binding-protein-dependent transport system inner membrane component AL533_08565 PF00528 Binding-protein-dependent transport system inner membrane component AL533_08570 PF01432 Peptidase family M3 AL533_08590 PF00593 TonB dependent receptor AL533_08590 PF07715 TonB-dependent Receptor Plug Domain AL533_08595 PF03544 Gram-negative bacterial TonB protein C-terminal AL533_08600 PF01618 MotA/TolQ/ExbB proton channel family AL533_08605 PF02472 Biopolymer transport protein ExbD/TolR AL533_08610 PF02472 Biopolymer transport protein ExbD/TolR AL533_08625 PF01274 Malate synthase AL533_08630 PF03969 AFG1-like ATPase AL533_08640 PF00743 Flavin-binding monooxygenase-like AL533_08645 PF03956 Lysine exporter LysO AL533_08650 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AL533_08660 PF00216 Bacterial DNA-binding protein AL533_08665 PF00575 S1 RNA binding domain AL533_08670 PF02224 Cytidylate kinase AL533_08680 PF14437 MafB19-like deaminase AL533_08690 PF03167 Uracil DNA glycosylase superfamily AL533_08700 PF03934 Type II secretion system (T2SS), protein K AL533_08705 PF11612 Type II secretion system (T2SS), protein J AL533_08705 PF07963 Prokaryotic N-terminal methylation motif AL533_08725 PF01026 TatD related DNase AL533_08735 PF09115 DNA polymerase III, delta subunit, C terminal AL533_08740 PF02348 Cytidylyltransferase AL533_08745 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AL533_08750 PF00005 ABC transporter AL533_08750 PF00664 ABC transporter transmembrane region AL533_08760 PF01618 MotA/TolQ/ExbB proton channel family AL533_08765 PF02195 ParB-like nuclease domain AL533_08765 PF17762 HTH domain found in ParB protein AL533_08770 PF13614 AAA domain AL533_08775 PF02527 rRNA small subunit methyltransferase G AL533_08780 PF00483 Nucleotidyl transferase AL533_08785 PF01636 Phosphotransferase enzyme family AL533_08790 PF03968 OstA-like protein AL533_08790 PF04453 LPS transport system D AL533_08795 PF00639 PPIC-type PPIASE domain AL533_08795 PF09312 SurA N-terminal domain AL533_08800 PF01116 Fructose-bisphosphate aldolase class-II AL533_08810 PF00162 Phosphoglycerate kinase AL533_08820 PF02545 Maf-like protein AL533_08825 PF08007 Cupin superfamily protein AL533_08840 PF00375 Sodium:dicarboxylate symporter family AL533_08845 PF06912 Protein of unknown function (DUF1275) AL533_08850 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AL533_08855 PF00005 ABC transporter AL533_08855 PF00664 ABC transporter transmembrane region AL533_08865 PF12833 Helix-turn-helix domain AL533_08865 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AL533_08870 PF01597 Glycine cleavage H-protein AL533_08875 PF02146 Sir2 family AL533_08880 PF00474 Sodium:solute symporter family AL533_08885 PF01037 Lrp/AsnC ligand binding domain AL533_08890 PF00171 Aldehyde dehydrogenase family AL533_08890 PF01619 Proline dehydrogenase AL533_08890 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AL533_08890 PF14850 DNA-binding domain of Proline dehydrogenase AL533_08895 PF04229 GrpB protein AL533_08900 PF05958 tRNA (Uracil-5-)-methyltransferase AL533_08910 PF09992 Phosphodiester glycosidase AL533_08920 PF04264 YceI-like domain AL533_08930 PF02780 Transketolase, C-terminal domain AL533_08930 PF00456 Transketolase, thiamine diphosphate binding domain AL533_08930 PF02779 Transketolase, pyrimidine binding domain AL533_08935 PF02772 S-adenosylmethionine synthetase, central domain AL533_08935 PF00438 S-adenosylmethionine synthetase, N-terminal domain AL533_08935 PF02773 S-adenosylmethionine synthetase, C-terminal domain AL533_08965 PF02075 Crossover junction endodeoxyribonuclease RuvC AL533_08970 PF01256 Carbohydrate kinase AL533_08970 PF03853 YjeF-related protein N-terminus AL533_08975 PF08331 Domain of unknown function (DUF1730) AL533_08980 PF06968 Biotin and Thiamin Synthesis associated domain AL533_08980 PF04055 Radical SAM superfamily AL533_08995 PF16970 Type-1 fimbrial protein, A AL533_09000 PF02753 Pili assembly chaperone PapD, C-terminal domain AL533_09000 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AL533_09005 PF13953 PapC C-terminal domain AL533_09005 PF13954 PapC N-terminal domain AL533_09005 PF00577 Outer membrane usher protein AL533_09030 PF00892 EamA-like transporter family AL533_09040 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AL533_09050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_09050 PF03466 LysR substrate binding domain AL533_09070 PF00440 Bacterial regulatory proteins, tetR family AL533_09080 PF01709 Transcriptional regulator AL533_09085 PF01037 Lrp/AsnC ligand binding domain AL533_09095 PF00005 ABC transporter AL533_09100 PF00528 Binding-protein-dependent transport system inner membrane component AL533_09105 PF00528 Binding-protein-dependent transport system inner membrane component AL533_09120 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AL533_09120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_09130 PF00296 Luciferase-like monooxygenase AL533_09135 PF03180 NLPA lipoprotein AL533_09140 PF03180 NLPA lipoprotein AL533_09145 PF00005 ABC transporter AL533_09145 PF09383 NIL domain AL533_09150 PF00528 Binding-protein-dependent transport system inner membrane component AL533_09155 PF01926 50S ribosome-binding GTPase AL533_09155 PF06071 Protein of unknown function (DUF933) AL533_09180 PF03591 AzlC protein AL533_09185 PF05437 Branched-chain amino acid transport protein (AzlD) AL533_09195 PF02222 ATP-grasp domain AL533_09200 PF08335 GlnD PII-uridylyltransferase AL533_09200 PF01909 Nucleotidyltransferase domain AL533_09200 PF01966 HD domain AL533_09205 PF00155 Aminotransferase class I and II AL533_09210 PF01810 LysE type translocator AL533_09215 PF12852 Cupin AL533_09215 PF12833 Helix-turn-helix domain AL533_09220 PF00255 Glutathione peroxidase AL533_09225 PF01641 SelR domain AL533_09230 PF00155 Aminotransferase class I and II AL533_09235 PF00375 Sodium:dicarboxylate symporter family AL533_09240 PF00710 Asparaginase, N-terminal AL533_09240 PF17763 Glutaminase/Asparaginase C-terminal domain AL533_09245 PF02811 PHP domain AL533_09245 PF01336 OB-fold nucleic acid binding domain AL533_09245 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL533_09245 PF14579 Helix-hairpin-helix motif AL533_09245 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL533_09250 PF00588 SpoU rRNA Methylase family AL533_09255 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_09270 PF13192 Thioredoxin domain AL533_09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_09285 PF03466 LysR substrate binding domain AL533_09290 PF01758 Sodium Bile acid symporter family AL533_09295 PF01022 Bacterial regulatory protein, arsR family AL533_09300 PF03960 ArsC family AL533_09315 PF03466 LysR substrate binding domain AL533_09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_09325 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AL533_09330 PF01177 Asp/Glu/Hydantoin racemase AL533_09335 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AL533_09340 PF00528 Binding-protein-dependent transport system inner membrane component AL533_09345 PF00005 ABC transporter AL533_09350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL533_09360 PF00083 Sugar (and other) transporter AL533_09365 PF00296 Luciferase-like monooxygenase AL533_09385 PF01654 Cytochrome bd terminal oxidase subunit I AL533_09390 PF02322 Cytochrome bd terminal oxidase subunit II AL533_09400 PF00392 Bacterial regulatory proteins, gntR family AL533_09400 PF00155 Aminotransferase class I and II AL533_09405 PF03466 LysR substrate binding domain AL533_09405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_09420 PF00698 Acyl transferase domain AL533_09425 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AL533_09435 PF01039 Carboxyl transferase domain AL533_09440 PF06857 Malonate decarboxylase delta subunit (MdcD) AL533_09445 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AL533_09450 PF16957 Malonate decarboxylase, alpha subunit, transporter AL533_09465 PF00155 Aminotransferase class I and II AL533_09465 PF00392 Bacterial regulatory proteins, gntR family AL533_09470 PF04172 LrgB-like family AL533_09475 PF03788 LrgA family AL533_09480 PF03466 LysR substrate binding domain AL533_09480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_09485 PF02798 Glutathione S-transferase, N-terminal domain AL533_09485 PF14834 Glutathione S-transferase, C-terminal domain AL533_09490 PF02798 Glutathione S-transferase, N-terminal domain AL533_09495 PF03466 LysR substrate binding domain AL533_09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_09505 PF00581 Rhodanese-like domain AL533_09510 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_09520 PF00266 Aminotransferase class-V AL533_09525 PF01810 LysE type translocator AL533_09530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_09530 PF03466 LysR substrate binding domain AL533_09540 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL533_09545 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL533_09550 PF00005 ABC transporter AL533_09555 PF00528 Binding-protein-dependent transport system inner membrane component AL533_09560 PF00528 Binding-protein-dependent transport system inner membrane component AL533_09575 PF00072 Response regulator receiver domain AL533_09580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_09580 PF00512 His Kinase A (phospho-acceptor) domain AL533_09580 PF09308 LuxQ, periplasmic AL533_09580 PF00072 Response regulator receiver domain AL533_09590 PF01037 Lrp/AsnC ligand binding domain AL533_09590 PF13404 AsnC-type helix-turn-helix domain AL533_09600 PF00717 Peptidase S24-like AL533_09630 PF00199 Catalase AL533_09630 PF06628 Catalase-related immune-responsive AL533_09630 PF18011 C-terminal domain found in long catalases AL533_09640 PF00994 Probable molybdopterin binding domain AL533_09640 PF02464 Competence-damaged protein AL533_09640 PF18146 Damage-inducible protein CinA KH domain AL533_09675 PF03466 LysR substrate binding domain AL533_09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_09695 PF00440 Bacterial regulatory proteins, tetR family AL533_09700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_09700 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_09700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_09705 PF01039 Carboxyl transferase domain AL533_09710 PF00378 Enoyl-CoA hydratase/isomerase AL533_09715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL533_09715 PF00289 Biotin carboxylase, N-terminal domain AL533_09715 PF02785 Biotin carboxylase C-terminal domain AL533_09715 PF00364 Biotin-requiring enzyme AL533_09720 PF00682 HMGL-like AL533_09725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_09725 PF03466 LysR substrate binding domain AL533_09740 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_09740 PF12806 Acetyl-CoA dehydrogenase C-terminal like AL533_09740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_09740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_09750 PF07690 Major Facilitator Superfamily AL533_09760 PF01144 Coenzyme A transferase AL533_09765 PF01144 Coenzyme A transferase AL533_09770 PF07690 Major Facilitator Superfamily AL533_09775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_09775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_09775 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_09780 PF00378 Enoyl-CoA hydratase/isomerase AL533_09790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL533_09790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL533_09790 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AL533_09795 PF02803 Thiolase, C-terminal domain AL533_09795 PF00108 Thiolase, N-terminal domain AL533_09800 PF09339 IclR helix-turn-helix domain AL533_09810 PF01810 LysE type translocator AL533_09815 PF16861 Carbamoyltransferase C-terminus AL533_09815 PF02543 Carbamoyltransferase N-terminus AL533_09825 PF03060 Nitronate monooxygenase AL533_09830 PF00378 Enoyl-CoA hydratase/isomerase AL533_09835 PF09339 IclR helix-turn-helix domain AL533_09840 PF02515 CoA-transferase family III AL533_09845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_09845 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_09845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_09850 PF07690 Major Facilitator Superfamily AL533_09855 PF13419 Haloacid dehalogenase-like hydrolase AL533_09865 PF01266 FAD dependent oxidoreductase AL533_09870 PF00528 Binding-protein-dependent transport system inner membrane component AL533_09875 PF08402 TOBE domain AL533_09875 PF00005 ABC transporter AL533_09885 PF00392 Bacterial regulatory proteins, gntR family AL533_09885 PF07702 UTRA domain AL533_09890 PF01494 FAD binding domain AL533_09895 PF01614 Bacterial transcriptional regulator AL533_09895 PF09339 IclR helix-turn-helix domain AL533_09900 PF02525 Flavodoxin-like fold AL533_09905 PF03466 LysR substrate binding domain AL533_09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_09910 PF02627 Carboxymuconolactone decarboxylase family AL533_09915 PF00171 Aldehyde dehydrogenase family AL533_09925 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AL533_09935 PF00171 Aldehyde dehydrogenase family AL533_09940 PF00296 Luciferase-like monooxygenase AL533_09945 PF01613 Flavin reductase like domain AL533_09950 PF12697 Alpha/beta hydrolase family AL533_09970 PF01292 Prokaryotic cytochrome b561 AL533_09975 PF00199 Catalase AL533_09980 PF01638 HxlR-like helix-turn-helix AL533_10025 PF03061 Thioesterase superfamily AL533_10030 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_10035 PF07848 PaaX-like protein AL533_10035 PF08223 PaaX-like protein C-terminal domain AL533_10040 PF14535 AMP-binding enzyme C-terminal domain AL533_10040 PF00501 AMP-binding enzyme AL533_10045 PF02803 Thiolase, C-terminal domain AL533_10045 PF00108 Thiolase, N-terminal domain AL533_10050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL533_10050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL533_10050 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AL533_10055 PF00378 Enoyl-CoA hydratase/isomerase AL533_10060 PF00378 Enoyl-CoA hydratase/isomerase AL533_10065 PF00175 Oxidoreductase NAD-binding domain AL533_10065 PF00111 2Fe-2S iron-sulfur cluster binding domain AL533_10065 PF00970 Oxidoreductase FAD-binding domain AL533_10070 PF01883 Iron-sulfur cluster assembly protein AL533_10075 PF05138 Phenylacetic acid catabolic protein AL533_10080 PF06243 Phenylacetic acid degradation B AL533_10085 PF05138 Phenylacetic acid catabolic protein AL533_10090 PF00171 Aldehyde dehydrogenase family AL533_10090 PF01575 MaoC like domain AL533_10095 PF03313 Serine dehydratase alpha chain AL533_10095 PF03315 Serine dehydratase beta chain AL533_10105 PF00376 MerR family regulatory protein AL533_10105 PF09278 MerR, DNA binding AL533_10115 PF02677 Epoxyqueuosine reductase QueH AL533_10130 PF07690 Major Facilitator Superfamily AL533_10135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL533_10140 PF03466 LysR substrate binding domain AL533_10140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_10170 PF10431 C-terminal, D2-small domain, of ClpB protein AL533_10170 PF17871 AAA lid domain AL533_10170 PF07724 AAA domain (Cdc48 subfamily) AL533_10170 PF00004 ATPase family associated with various cellular activities (AAA) AL533_10180 PF00691 OmpA family AL533_10180 PF18393 MotY N-terminal domain AL533_10235 PF03466 LysR substrate binding domain AL533_10235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_10240 PF07690 Major Facilitator Superfamily AL533_10255 PF00005 ABC transporter AL533_10265 PF01425 Amidase AL533_10270 PF01402 Ribbon-helix-helix protein, copG family AL533_10270 PF08753 NikR C terminal nickel binding domain AL533_10280 PF01638 HxlR-like helix-turn-helix AL533_10285 PF02525 Flavodoxin-like fold AL533_10290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL533_10290 PF00289 Biotin carboxylase, N-terminal domain AL533_10290 PF02785 Biotin carboxylase C-terminal domain AL533_10305 PF08240 Alcohol dehydrogenase GroES-like domain AL533_10305 PF00107 Zinc-binding dehydrogenase AL533_10305 PF13823 Alcohol dehydrogenase GroES-associated AL533_10315 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AL533_10315 PF12833 Helix-turn-helix domain AL533_10345 PF00654 Voltage gated chloride channel AL533_10350 PF00289 Biotin carboxylase, N-terminal domain AL533_10350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL533_10350 PF00364 Biotin-requiring enzyme AL533_10350 PF02785 Biotin carboxylase C-terminal domain AL533_10360 PF07286 Protein of unknown function (DUF1445) AL533_10365 PF03746 LamB/YcsF family AL533_10370 PF01566 Natural resistance-associated macrophage protein AL533_10375 PF03466 LysR substrate binding domain AL533_10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_10385 PF08281 Sigma-70, region 4 AL533_10385 PF04542 Sigma-70 region 2 AL533_10395 PF05114 Protein of unknown function (DUF692) AL533_10435 PF00892 EamA-like transporter family AL533_10450 PF06629 MltA-interacting protein MipA AL533_10455 PF00202 Aminotransferase class-III AL533_10505 PF03527 RHS protein AL533_10505 PF14220 Domain of unknown function (DUF4329) AL533_10505 PF05593 RHS Repeat AL533_10510 PF04717 Type VI secretion system, phage-baseplate injector AL533_10510 PF16671 Actin cross-linking domain AL533_10545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL533_10545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL533_10555 PF13411 MerR HTH family regulatory protein AL533_10555 PF07739 TipAS antibiotic-recognition domain AL533_10560 PF00313 'Cold-shock' DNA-binding domain AL533_10565 PF00117 Glutamine amidotransferase class-I AL533_10570 PF01053 Cys/Met metabolism PLP-dependent enzyme AL533_10580 PF01037 Lrp/AsnC ligand binding domain AL533_10580 PF13404 AsnC-type helix-turn-helix domain AL533_10585 PF06865 Pyrimidine/purine nucleoside phosphorylase AL533_10595 PF07715 TonB-dependent Receptor Plug Domain AL533_10615 PF07690 Major Facilitator Superfamily AL533_10640 PF00563 EAL domain AL533_10640 PF00990 Diguanylate cyclase, GGDEF domain AL533_10640 PF03707 Bacterial signalling protein N terminal repeat AL533_10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_10655 PF03466 LysR substrate binding domain AL533_10660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_10660 PF12806 Acetyl-CoA dehydrogenase C-terminal like AL533_10660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_10660 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_10665 PF01575 MaoC like domain AL533_10670 PF00106 short chain dehydrogenase AL533_10685 PF05188 MutS domain II AL533_10685 PF00488 MutS domain V AL533_10685 PF01624 MutS domain I AL533_10685 PF05192 MutS domain III AL533_10685 PF05190 MutS family domain IV AL533_10695 PF00037 4Fe-4S binding domain AL533_10695 PF11953 Domain of unknown function (DUF3470) AL533_10705 PF01596 O-methyltransferase AL533_10715 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_10720 PF01205 Uncharacterized protein family UPF0029 AL533_10725 PF13533 Biotin-lipoyl like AL533_10730 PF00664 ABC transporter transmembrane region AL533_10730 PF03412 Peptidase C39 family AL533_10730 PF00005 ABC transporter AL533_10735 PF02321 Outer membrane efflux protein AL533_10740 PF00005 ABC transporter AL533_10740 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL533_10745 PF03968 OstA-like protein AL533_10760 PF00571 CBS domain AL533_10760 PF01380 SIS domain AL533_10765 PF01406 tRNA synthetases class I (C) catalytic domain AL533_10765 PF09190 DALR domain AL533_10795 PF00872 Transposase, Mutator family AL533_10835 PF03807 NADP oxidoreductase coenzyme F420-dependent AL533_10835 PF14748 Pyrroline-5-carboxylate reductase dimerisation AL533_10845 PF00313 'Cold-shock' DNA-binding domain AL533_10850 PF01810 LysE type translocator AL533_10880 PF02601 Exonuclease VII, large subunit AL533_10880 PF13742 OB-fold nucleic acid binding domain AL533_10915 PF00376 MerR family regulatory protein AL533_10915 PF09278 MerR, DNA binding AL533_10920 PF00403 Heavy-metal-associated domain AL533_10930 PF00158 Sigma-54 interaction domain AL533_10930 PF02830 V4R domain AL533_10930 PF02954 Bacterial regulatory protein, Fis family AL533_10930 PF06505 Activator of aromatic catabolism AL533_10940 PF06099 Phenol hydroxylase subunit AL533_10945 PF02332 Methane/Phenol/Toluene Hydroxylase AL533_10950 PF02406 MmoB/DmpM family AL533_10955 PF04945 YHS domain AL533_10955 PF02332 Methane/Phenol/Toluene Hydroxylase AL533_10965 PF00970 Oxidoreductase FAD-binding domain AL533_10965 PF00111 2Fe-2S iron-sulfur cluster binding domain AL533_10965 PF00175 Oxidoreductase NAD-binding domain AL533_10975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_10975 PF03466 LysR substrate binding domain AL533_10980 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AL533_10980 PF00355 Rieske [2Fe-2S] domain AL533_10985 PF00866 Ring hydroxylating beta subunit AL533_10990 PF00175 Oxidoreductase NAD-binding domain AL533_10990 PF00970 Oxidoreductase FAD-binding domain AL533_10990 PF00111 2Fe-2S iron-sulfur cluster binding domain AL533_10995 PF00106 short chain dehydrogenase AL533_11000 PF03594 Benzoate membrane transport protein AL533_11005 PF07690 Major Facilitator Superfamily AL533_11015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL533_11015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL533_11020 PF11898 Domain of unknown function (DUF3418) AL533_11020 PF04408 Helicase associated domain (HA2) AL533_11020 PF00270 DEAD/DEAH box helicase AL533_11020 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AL533_11020 PF00271 Helicase conserved C-terminal domain AL533_11025 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL533_11025 PF00578 AhpC/TSA family AL533_11035 PF05175 Methyltransferase small domain AL533_11045 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_11045 PF13192 Thioredoxin domain AL533_11055 PF02798 Glutathione S-transferase, N-terminal domain AL533_11055 PF00043 Glutathione S-transferase, C-terminal domain AL533_11065 PF02390 Putative methyltransferase AL533_11070 PF00043 Glutathione S-transferase, C-terminal domain AL533_11070 PF13417 Glutathione S-transferase, N-terminal domain AL533_11080 PF00691 OmpA family AL533_11080 PF13488 Glycine zipper AL533_11085 PF01979 Amidohydrolase family AL533_11090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL533_11090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL533_11100 PF01170 Putative RNA methylase family UPF0020 AL533_11100 PF10672 S-adenosylmethionine-dependent methyltransferase AL533_11100 PF02926 THUMP domain AL533_11115 PF10431 C-terminal, D2-small domain, of ClpB protein AL533_11115 PF02861 Clp amino terminal domain, pathogenicity island component AL533_11115 PF17871 AAA lid domain AL533_11115 PF00004 ATPase family associated with various cellular activities (AAA) AL533_11115 PF07724 AAA domain (Cdc48 subfamily) AL533_11130 PF02566 OsmC-like protein AL533_11135 PF00027 Cyclic nucleotide-binding domain AL533_11135 PF13545 Crp-like helix-turn-helix domain AL533_11140 PF00248 Aldo/keto reductase family AL533_11155 PF00709 Adenylosuccinate synthetase AL533_11160 PF13393 Histidyl-tRNA synthetase AL533_11165 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL533_11165 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL533_11170 PF01411 tRNA synthetases class II (A) AL533_11170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL533_11170 PF02272 DHHA1 domain AL533_11175 PF00696 Amino acid kinase family AL533_11175 PF01842 ACT domain AL533_11175 PF13840 ACT domain AL533_11180 PF02599 Global regulator protein family AL533_11185 PF01351 Ribonuclease HII AL533_11195 PF01292 Prokaryotic cytochrome b561 AL533_11200 PF00962 Adenosine/AMP deaminase AL533_11205 PF00860 Permease family AL533_11215 PF00743 Flavin-binding monooxygenase-like AL533_11220 PF00106 short chain dehydrogenase AL533_11230 PF02678 Pirin AL533_11230 PF17954 Quercetinase C-terminal cupin domain AL533_11235 PF17932 Tetracyclin repressor-like, C-terminal domain AL533_11235 PF00440 Bacterial regulatory proteins, tetR family AL533_11245 PF00106 short chain dehydrogenase AL533_11250 PF00743 Flavin-binding monooxygenase-like AL533_11255 PF04072 Leucine carboxyl methyltransferase AL533_11260 PF12833 Helix-turn-helix domain AL533_11260 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AL533_11265 PF00743 Flavin-binding monooxygenase-like AL533_11270 PF00106 short chain dehydrogenase AL533_11275 PF07859 alpha/beta hydrolase fold AL533_11280 PF05199 GMC oxidoreductase AL533_11285 PF18381 YcaO cyclodehydratase C-terminal domain AL533_11285 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AL533_11290 PF03573 outer membrane porin, OprD family AL533_11295 PF07690 Major Facilitator Superfamily AL533_11300 PF00355 Rieske [2Fe-2S] domain AL533_11305 PF00175 Oxidoreductase NAD-binding domain AL533_11305 PF00111 2Fe-2S iron-sulfur cluster binding domain AL533_11320 PF07690 Major Facilitator Superfamily AL533_11325 PF00378 Enoyl-CoA hydratase/isomerase AL533_11330 PF00171 Aldehyde dehydrogenase family AL533_11340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_11340 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_11340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_11345 PF03573 outer membrane porin, OprD family AL533_11360 PF07519 Tannase and feruloyl esterase AL533_11365 PF00892 EamA-like transporter family AL533_11370 PF12833 Helix-turn-helix domain AL533_11370 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AL533_11375 PF00171 Aldehyde dehydrogenase family AL533_11380 PF00324 Amino acid permease AL533_11385 PF04958 Arginine N-succinyltransferase beta subunit AL533_11410 PF00171 Aldehyde dehydrogenase family AL533_11420 PF07729 FCD domain AL533_11420 PF00392 Bacterial regulatory proteins, gntR family AL533_11430 PF00324 Amino acid permease AL533_11435 PF01266 FAD dependent oxidoreductase AL533_11440 PF00324 Amino acid permease AL533_11450 PF05643 Putative bacterial lipoprotein (DUF799) AL533_11460 PF03783 Curli production assembly/transport component CsgG AL533_11510 PF04717 Type VI secretion system, phage-baseplate injector AL533_11510 PF16671 Actin cross-linking domain AL533_11530 PF03180 NLPA lipoprotein AL533_11550 PF09828 Chromate resistance exported protein AL533_11555 PF02417 Chromate transporter AL533_11565 PF14863 Alkyl sulfatase dimerisation AL533_11565 PF14864 Alkyl sulfatase C-terminal AL533_11565 PF00753 Metallo-beta-lactamase superfamily AL533_11575 PF01545 Cation efflux family AL533_11575 PF16916 Dimerisation domain of Zinc Transporter AL533_11590 PF07690 Major Facilitator Superfamily AL533_11610 PF00873 AcrB/AcrD/AcrF family AL533_11615 PF00529 HlyD membrane-fusion protein of T1SS AL533_11615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL533_11635 PF00872 Transposase, Mutator family AL533_11705 PF13356 Arm DNA-binding domain AL533_11705 PF00589 Phage integrase family AL533_11715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL533_11715 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_11725 PF00764 Arginosuccinate synthase AL533_11730 PF00360 Phytochrome region AL533_11730 PF00990 Diguanylate cyclase, GGDEF domain AL533_11730 PF01590 GAF domain AL533_11730 PF00563 EAL domain AL533_11735 PF01979 Amidohydrolase family AL533_11740 PF00929 Exonuclease AL533_11760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL533_11760 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_11765 PF00005 ABC transporter AL533_11765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL533_11770 PF12911 N-terminal TM domain of oligopeptide transport permease C AL533_11770 PF00528 Binding-protein-dependent transport system inner membrane component AL533_11775 PF00528 Binding-protein-dependent transport system inner membrane component AL533_11780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL533_11785 PF01476 LysM domain AL533_11785 PF01476 LysM domain AL533_11785 PF01464 Transglycosylase SLT domain AL533_11785 PF01464 Transglycosylase SLT domain AL533_11790 PF00929 Exonuclease AL533_11800 PF09297 NADH pyrophosphatase zinc ribbon domain AL533_11800 PF00293 NUDIX domain AL533_11810 PF04972 BON domain AL533_11815 PF02021 Uncharacterised protein family UPF0102 AL533_11820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL533_11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_11825 PF03466 LysR substrate binding domain AL533_11830 PF01810 LysE type translocator AL533_11840 PF13411 MerR HTH family regulatory protein AL533_11850 PF01494 FAD binding domain AL533_11855 PF01494 FAD binding domain AL533_11860 PF05195 Aminopeptidase P, N-terminal domain AL533_11860 PF00557 Metallopeptidase family M24 AL533_11895 PF01812 5-formyltetrahydrofolate cyclo-ligase family AL533_11905 PF03895 YadA-like membrane anchor domain AL533_11905 PF05662 Coiled stalk of trimeric autotransporter adhesin AL533_11905 PF05662 Coiled stalk of trimeric autotransporter adhesin AL533_11905 PF05658 Head domain of trimeric autotransporter adhesin AL533_11905 PF03895 YadA-like membrane anchor domain AL533_11905 PF13018 Extended Signal Peptide of Type V secretion system AL533_11905 PF05658 Head domain of trimeric autotransporter adhesin AL533_11905 PF05662 Coiled stalk of trimeric autotransporter adhesin AL533_11905 PF13018 Extended Signal Peptide of Type V secretion system AL533_11905 PF03895 YadA-like membrane anchor domain AL533_11905 PF05658 Head domain of trimeric autotransporter adhesin AL533_11905 PF13018 Extended Signal Peptide of Type V secretion system AL533_11905 PF05662 Coiled stalk of trimeric autotransporter adhesin AL533_11905 PF13018 Extended Signal Peptide of Type V secretion system AL533_11905 PF03895 YadA-like membrane anchor domain AL533_11905 PF05658 Head domain of trimeric autotransporter adhesin AL533_11910 PF03895 YadA-like membrane anchor domain AL533_11910 PF05658 Head domain of trimeric autotransporter adhesin AL533_11910 PF05662 Coiled stalk of trimeric autotransporter adhesin AL533_11910 PF13018 Extended Signal Peptide of Type V secretion system AL533_11925 PF00004 ATPase family associated with various cellular activities (AAA) AL533_11925 PF05362 Lon protease (S16) C-terminal proteolytic domain AL533_11925 PF02190 ATP-dependent protease La (LON) substrate-binding domain AL533_11930 PF02590 Predicted SPOUT methyltransferase AL533_11935 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AL533_11945 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AL533_11945 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AL533_11950 PF04060 Putative Fe-S cluster AL533_11955 PF00633 Helix-hairpin-helix motif AL533_11955 PF10576 Iron-sulfur binding domain of endonuclease III AL533_11955 PF00730 HhH-GPD superfamily base excision DNA repair protein AL533_11965 PF05191 Adenylate kinase, active site lid AL533_11980 PF03717 Penicillin-binding Protein dimerisation domain AL533_11980 PF00905 Penicillin binding protein transpeptidase domain AL533_12000 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL533_12005 PF01730 UreF AL533_12010 PF02814 UreE urease accessory protein, N-terminal domain AL533_12010 PF05194 UreE urease accessory protein, C-terminal domain AL533_12015 PF00449 Urease alpha-subunit, N-terminal domain AL533_12015 PF01979 Amidohydrolase family AL533_12020 PF00699 Urease beta subunit AL533_12025 PF00547 Urease, gamma subunit AL533_12030 PF01774 UreD urease accessory protein AL533_12045 PF00463 Isocitrate lyase family AL533_12050 PF03466 LysR substrate binding domain AL533_12050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_12055 PF00571 CBS domain AL533_12055 PF03471 Transporter associated domain AL533_12055 PF01595 Cyclin M transmembrane N-terminal domain AL533_12085 PF00009 Elongation factor Tu GTP binding domain AL533_12090 PF01507 Phosphoadenosine phosphosulfate reductase family AL533_12100 PF14052 Capsule assembly protein Wzi AL533_12105 PF00152 tRNA synthetases class II (D, K and N) AL533_12105 PF01336 OB-fold nucleic acid binding domain AL533_12120 PF00301 Rubredoxin AL533_12125 PF18113 Rubredoxin binding C-terminal domain AL533_12125 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_12130 PF00561 alpha/beta hydrolase fold AL533_12135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_12135 PF03466 LysR substrate binding domain AL533_12145 PF02503 Polyphosphate kinase middle domain AL533_12145 PF13089 Polyphosphate kinase N-terminal domain AL533_12145 PF17941 Polyphosphate kinase C-terminal domain 1 AL533_12145 PF13090 Polyphosphate kinase C-terminal domain 2 AL533_12150 PF00912 Transglycosylase AL533_12155 PF01694 Rhomboid family AL533_12165 PF00005 ABC transporter AL533_12170 PF13472 GDSL-like Lipase/Acylhydrolase family AL533_12175 PF00484 Carbonic anhydrase AL533_12180 PF00561 alpha/beta hydrolase fold AL533_12190 PF07715 TonB-dependent Receptor Plug Domain AL533_12190 PF00593 TonB dependent receptor AL533_12195 PF01106 NifU-like domain AL533_12195 PF01521 Iron-sulphur cluster biosynthesis AL533_12205 PF00884 Sulfatase AL533_12210 PF03781 Sulfatase-modifying factor enzyme 1 AL533_12225 PF00291 Pyridoxal-phosphate dependent enzyme AL533_12230 PF01384 Phosphate transporter family AL533_12235 PF00809 Pterin binding enzyme AL533_12235 PF02574 Homocysteine S-methyltransferase AL533_12235 PF02607 B12 binding domain AL533_12235 PF02310 B12 binding domain AL533_12235 PF02965 Vitamin B12 dependent methionine synthase, activation domain AL533_12255 PF01263 Aldose 1-epimerase AL533_12260 PF07690 Major Facilitator Superfamily AL533_12265 PF12833 Helix-turn-helix domain AL533_12265 PF07883 Cupin domain AL533_12270 PF04960 Glutaminase AL533_12275 PF01327 Polypeptide deformylase AL533_12280 PF07690 Major Facilitator Superfamily AL533_12290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL533_12290 PF00205 Thiamine pyrophosphate enzyme, central domain AL533_12290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL533_12295 PF00171 Aldehyde dehydrogenase family AL533_12300 PF01958 Domain of unknown function DUF108 AL533_12300 PF03447 Homoserine dehydrogenase, NAD binding domain AL533_12310 PF12697 Alpha/beta hydrolase family AL533_12320 PF07690 Major Facilitator Superfamily AL533_12325 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_12325 PF14759 Reductase C-terminal AL533_12330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL533_12340 PF00355 Rieske [2Fe-2S] domain AL533_12350 PF00355 Rieske [2Fe-2S] domain AL533_12355 PF01614 Bacterial transcriptional regulator AL533_12355 PF09339 IclR helix-turn-helix domain AL533_12380 PF00378 Enoyl-CoA hydratase/isomerase AL533_12390 PF00535 Glycosyl transferase family 2 AL533_12395 PF14883 Hypothetical glycosyl hydrolase family 13 AL533_12395 PF01522 Polysaccharide deacetylase AL533_12400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL533_12405 PF07152 YaeQ protein AL533_12415 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL533_12415 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL533_12425 PF03061 Thioesterase superfamily AL533_12435 PF02028 BCCT, betaine/carnitine/choline family transporter AL533_12440 PF02028 BCCT, betaine/carnitine/choline family transporter AL533_12445 PF00440 Bacterial regulatory proteins, tetR family AL533_12445 PF13977 BetI-type transcriptional repressor, C-terminal AL533_12450 PF00171 Aldehyde dehydrogenase family AL533_12455 PF00732 GMC oxidoreductase AL533_12455 PF05199 GMC oxidoreductase AL533_12460 PF06039 Malate:quinone oxidoreductase (Mqo) AL533_12470 PF02574 Homocysteine S-methyltransferase AL533_12475 PF13520 Amino acid permease AL533_12495 PF00701 Dihydrodipicolinate synthetase family AL533_12500 PF00083 Sugar (and other) transporter AL533_12510 PF04851 Type III restriction enzyme, res subunit AL533_12510 PF00271 Helicase conserved C-terminal domain AL533_12510 PF08463 EcoEI R protein C-terminal AL533_12510 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AL533_12520 PF12161 HsdM N-terminal domain AL533_12520 PF02384 N-6 DNA Methylase AL533_12565 PF02661 Fic/DOC family AL533_12565 PF13784 Fic/DOC family N-terminal AL533_12570 PF00872 Transposase, Mutator family AL533_12585 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL533_12585 PF00691 OmpA family AL533_12600 PF00004 ATPase family associated with various cellular activities (AAA) AL533_12600 PF17862 AAA+ lid domain AL533_12600 PF01434 Peptidase family M41 AL533_12610 PF00271 Helicase conserved C-terminal domain AL533_12610 PF00176 SNF2 family N-terminal domain AL533_12625 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AL533_12625 PF18766 SWI2/SNF2 ATPase AL533_12625 PF11867 Domain of unknown function (DUF3387) AL533_12635 PF02384 N-6 DNA Methylase AL533_12655 PF03848 Tellurite resistance protein TehB AL533_12655 PF09313 Domain of unknown function (DUF1971) AL533_12720 PF00589 Phage integrase family AL533_12720 PF13356 Arm DNA-binding domain AL533_12735 PF07690 Major Facilitator Superfamily AL533_12740 PF13533 Biotin-lipoyl like AL533_12745 PF03061 Thioesterase superfamily AL533_12750 PF00490 Delta-aminolevulinic acid dehydratase AL533_12755 PF01266 FAD dependent oxidoreductase AL533_12760 PF08338 Domain of unknown function (DUF1731) AL533_12760 PF01370 NAD dependent epimerase/dehydratase family AL533_12780 PF00149 Calcineurin-like phosphoesterase AL533_12780 PF12320 Type 5 capsule protein repressor C-terminal domain AL533_12790 PF02673 Bacitracin resistance protein BacA AL533_12795 PF01168 Alanine racemase, N-terminal domain AL533_12800 PF00437 Type II/IV secretion system protein AL533_12805 PF00437 Type II/IV secretion system protein AL533_12810 PF01475 Ferric uptake regulator family AL533_12815 PF04355 SmpA / OmlA family AL533_12820 PF03658 RnfH family Ubiquitin AL533_12835 PF01814 Hemerythrin HHE cation binding domain AL533_12840 PF13230 Glutamine amidotransferases class-II AL533_12850 PF00696 Amino acid kinase family AL533_12855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL533_12855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL533_12855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL533_12855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL533_12860 PF00692 dUTPase AL533_12865 PF00580 UvrD/REP helicase N-terminal domain AL533_12865 PF13361 UvrD-like helicase C-terminal domain AL533_12870 PF00691 OmpA family AL533_12870 PF13488 Glycine zipper AL533_12875 PF01553 Acyltransferase AL533_12885 PF03775 Septum formation inhibitor MinC, C-terminal domain AL533_12890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL533_12895 PF03776 Septum formation topological specificity factor MinE AL533_12905 PF01810 LysE type translocator AL533_12910 PF17854 FtsK alpha domain AL533_12910 PF09397 Ftsk gamma domain AL533_12910 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AL533_12910 PF01580 FtsK/SpoIIIE family AL533_12915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_12920 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AL533_12925 PF04377 Arginine-tRNA-protein transferase, C terminus AL533_12925 PF04376 Arginine-tRNA-protein transferase, N terminus AL533_12930 PF00583 Acetyltransferase (GNAT) family AL533_12945 PF03143 Elongation factor Tu C-terminal domain AL533_12945 PF00009 Elongation factor Tu GTP binding domain AL533_12945 PF03144 Elongation factor Tu domain 2 AL533_12950 PF00679 Elongation factor G C-terminus AL533_12950 PF03144 Elongation factor Tu domain 2 AL533_12950 PF14492 Elongation Factor G, domain II AL533_12950 PF00009 Elongation factor Tu GTP binding domain AL533_12950 PF03764 Elongation factor G, domain IV AL533_12955 PF00177 Ribosomal protein S7p/S5e AL533_12960 PF00164 Ribosomal protein S12/S23 AL533_12970 PF00109 Beta-ketoacyl synthase, N-terminal domain AL533_12970 PF02801 Beta-ketoacyl synthase, C-terminal domain AL533_12980 PF05726 Pirin C-terminal cupin domain AL533_12980 PF02678 Pirin AL533_12990 PF00795 Carbon-nitrogen hydrolase AL533_12990 PF02540 NAD synthase AL533_13005 PF00175 Oxidoreductase NAD-binding domain AL533_13005 PF00970 Oxidoreductase FAD-binding domain AL533_13005 PF00111 2Fe-2S iron-sulfur cluster binding domain AL533_13010 PF00171 Aldehyde dehydrogenase family AL533_13015 PF00355 Rieske [2Fe-2S] domain AL533_13015 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AL533_13020 PF07859 alpha/beta hydrolase fold AL533_13025 PF02028 BCCT, betaine/carnitine/choline family transporter AL533_13030 PF00180 Isocitrate/isopropylmalate dehydrogenase AL533_13035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_13035 PF03466 LysR substrate binding domain AL533_13055 PF00037 4Fe-4S binding domain AL533_13060 PF01467 Cytidylyltransferase-like AL533_13065 PF00589 Phage integrase family AL533_13065 PF13356 Arm DNA-binding domain AL533_13130 PF00583 Acetyltransferase (GNAT) family AL533_13205 PF01668 SmpB protein AL533_13215 PF03358 NADPH-dependent FMN reductase AL533_13225 PF01479 S4 domain AL533_13225 PF00849 RNA pseudouridylate synthase AL533_13230 PF13525 Outer membrane lipoprotein AL533_13235 PF10410 DnaB-helicase binding domain of primase AL533_13235 PF08275 DNA primase catalytic core, N-terminal domain AL533_13235 PF08278 DNA primase DnaG DnaB-binding AL533_13235 PF01807 CHC2 zinc finger AL533_13240 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AL533_13240 PF01488 Shikimate / quinate 5-dehydrogenase AL533_13240 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AL533_13250 PF03550 Outer membrane lipoprotein LolB AL533_13255 PF08544 GHMP kinases C terminal AL533_13255 PF00288 GHMP kinases N terminal domain AL533_13280 PF14572 Phosphoribosyl synthetase-associated domain AL533_13280 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AL533_13285 PF01386 Ribosomal L25p family AL533_13290 PF01195 Peptidyl-tRNA hydrolase AL533_13295 PF02261 Aspartate decarboxylase AL533_13310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL533_13320 PF02581 Thiamine monophosphate synthase AL533_13320 PF08543 Phosphomethylpyrimidine kinase AL533_13320 PF03070 TENA/THI-4/PQQC family AL533_13325 PF04972 BON domain AL533_13325 PF01476 LysM domain AL533_13330 PF00550 Phosphopantetheine attachment site AL533_13340 PF00698 Acyl transferase domain AL533_13345 PF01783 Ribosomal L32p protein family AL533_13350 PF02620 Large ribosomal RNA subunit accumulation protein YceD AL533_13355 PF04315 Elongation factor P hydroxylase AL533_13360 PF01300 Telomere recombination AL533_13365 PF02616 Segregation and condensation protein ScpA AL533_13370 PF04079 Segregation and condensation complex subunit ScpB AL533_13375 PF00849 RNA pseudouridylate synthase AL533_13375 PF01479 S4 domain AL533_13390 PF00155 Aminotransferase class I and II AL533_13395 PF00202 Aminotransferase class-III AL533_13395 PF06968 Biotin and Thiamin Synthesis associated domain AL533_13395 PF04055 Radical SAM superfamily AL533_13400 PF08241 Methyltransferase domain AL533_13400 PF12697 Alpha/beta hydrolase family AL533_13405 PF02358 Trehalose-phosphatase AL533_13410 PF00982 Glycosyltransferase family 20 AL533_13415 PF07690 Major Facilitator Superfamily AL533_13425 PF00210 Ferritin-like domain AL533_13430 PF12826 Helix-hairpin-helix motif AL533_13430 PF00533 BRCA1 C Terminus (BRCT) domain AL533_13430 PF01653 NAD-dependent DNA ligase adenylation domain AL533_13430 PF03120 NAD-dependent DNA ligase OB-fold domain AL533_13430 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AL533_13440 PF06470 SMC proteins Flexible Hinge Domain AL533_13440 PF02463 RecF/RecN/SMC N terminal domain AL533_13450 PF01925 Sulfite exporter TauE/SafE AL533_13460 PF03309 Type III pantothenate kinase AL533_13465 PF00448 SRP54-type protein, GTPase domain AL533_13465 PF02881 SRP54-type protein, helical bundle domain AL533_13465 PF02978 Signal peptide binding domain AL533_13475 PF01207 Dihydrouridine synthase (Dus) AL533_13510 PF00692 dUTPase AL533_13525 PF01048 Phosphorylase superfamily AL533_13530 PF10609 NUBPL iron-transfer P-loop NTPase AL533_13545 PF01588 Putative tRNA binding domain AL533_13545 PF09334 tRNA synthetases class I (M) AL533_13575 PF13533 Biotin-lipoyl like AL533_13580 PF00291 Pyridoxal-phosphate dependent enzyme AL533_13595 PF05552 Conserved TM helix AL533_13610 PF00175 Oxidoreductase NAD-binding domain AL533_13610 PF00970 Oxidoreductase FAD-binding domain AL533_13615 PF03466 LysR substrate binding domain AL533_13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_13625 PF00313 'Cold-shock' DNA-binding domain AL533_13635 PF00361 Proton-conducting membrane transporter AL533_13640 PF00361 Proton-conducting membrane transporter AL533_13645 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AL533_13645 PF00361 Proton-conducting membrane transporter AL533_13650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AL533_13655 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AL533_13660 PF12838 4Fe-4S dicluster domain AL533_13665 PF00146 NADH dehydrogenase AL533_13670 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL533_13670 PF00384 Molybdopterin oxidoreductase AL533_13670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL533_13675 PF10531 SLBB domain AL533_13675 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AL533_13675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AL533_13685 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AL533_13685 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AL533_13690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AL533_13695 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AL533_13700 PF00990 Diguanylate cyclase, GGDEF domain AL533_13700 PF17151 Periplasmic sensor domain AL533_13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_13710 PF00512 His Kinase A (phospho-acceptor) domain AL533_13710 PF00672 HAMP domain AL533_13715 PF00072 Response regulator receiver domain AL533_13715 PF00486 Transcriptional regulatory protein, C terminal AL533_13725 PF03477 ATP cone domain AL533_13725 PF02867 Ribonucleotide reductase, barrel domain AL533_13725 PF00317 Ribonucleotide reductase, all-alpha domain AL533_13735 PF00268 Ribonucleotide reductase, small chain AL533_13740 PF02567 Phenazine biosynthesis-like protein AL533_13765 PF01613 Flavin reductase like domain AL533_13770 PF08267 Cobalamin-independent synthase, N-terminal domain AL533_13770 PF01717 Cobalamin-independent synthase, Catalytic domain AL533_13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_13780 PF03466 LysR substrate binding domain AL533_13785 PF01810 LysE type translocator AL533_13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_13790 PF03466 LysR substrate binding domain AL533_13800 PF07690 Major Facilitator Superfamily AL533_13810 PF03466 LysR substrate binding domain AL533_13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_13815 PF14537 Cytochrome c3 AL533_13815 PF00890 FAD binding domain AL533_13830 PF00440 Bacterial regulatory proteins, tetR family AL533_13830 PF17932 Tetracyclin repressor-like, C-terminal domain AL533_13835 PF02515 CoA-transferase family III AL533_13840 PF07690 Major Facilitator Superfamily AL533_13845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_13845 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_13845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_13850 PF03466 LysR substrate binding domain AL533_13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_13855 PF08240 Alcohol dehydrogenase GroES-like domain AL533_13855 PF00107 Zinc-binding dehydrogenase AL533_13860 PF00962 Adenosine/AMP deaminase AL533_13885 PF02445 Quinolinate synthetase A protein AL533_13890 PF01960 ArgJ family AL533_13895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL533_13895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL533_13900 PF00893 Small Multidrug Resistance protein AL533_13915 PF07731 Multicopper oxidase AL533_13915 PF00394 Multicopper oxidase AL533_13915 PF07732 Multicopper oxidase AL533_13930 PF00834 Ribulose-phosphate 3 epimerase family AL533_13940 PF00756 Putative esterase AL533_13950 PF04445 Putative SAM-dependent methyltransferase AL533_13955 PF00814 Glycoprotease family AL533_13960 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_13965 PF00293 NUDIX domain AL533_14015 PF04715 Anthranilate synthase component I, N terminal region AL533_14015 PF00425 chorismate binding enzyme AL533_14020 PF00155 Aminotransferase class I and II AL533_14025 PF00815 Histidinol dehydrogenase AL533_14030 PF01634 ATP phosphoribosyltransferase AL533_14035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL533_14040 PF01722 BolA-like protein AL533_14045 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL533_14050 PF00309 Sigma-54 factor, Activator interacting domain (AID) AL533_14050 PF04552 Sigma-54, DNA binding domain AL533_14050 PF04963 Sigma-54 factor, core binding domain AL533_14095 PF00795 Carbon-nitrogen hydrolase AL533_14105 PF01047 MarR family AL533_14110 PF02566 OsmC-like protein AL533_14115 PF00437 Type II/IV secretion system protein AL533_14135 PF00476 DNA polymerase family A AL533_14135 PF01612 3'-5' exonuclease AL533_14135 PF01367 5'-3' exonuclease, C-terminal SAM fold AL533_14135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL533_14140 PF02325 YGGT family AL533_14145 PF03807 NADP oxidoreductase coenzyme F420-dependent AL533_14145 PF14748 Pyrroline-5-carboxylate reductase dimerisation AL533_14150 PF11734 TilS substrate C-terminal domain AL533_14150 PF01171 PP-loop family AL533_14150 PF09179 TilS substrate binding domain AL533_14155 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AL533_14160 PF02541 Ppx/GppA phosphatase family AL533_14165 PF00085 Thioredoxin AL533_14170 PF07498 Rho termination factor, N-terminal domain AL533_14170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL533_14170 PF07497 Rho termination factor, RNA-binding domain AL533_14185 PF00216 Bacterial DNA-binding protein AL533_14190 PF03483 B3/4 domain AL533_14190 PF01588 Putative tRNA binding domain AL533_14190 PF03147 Ferredoxin-fold anticodon binding domain AL533_14190 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AL533_14190 PF03484 tRNA synthetase B5 domain AL533_14195 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AL533_14195 PF01409 tRNA synthetases class II core domain (F) AL533_14215 PF00453 Ribosomal protein L20 AL533_14220 PF01632 Ribosomal protein L35 AL533_14225 PF07690 Major Facilitator Superfamily AL533_14230 PF09335 SNARE associated Golgi protein AL533_14235 PF02798 Glutathione S-transferase, N-terminal domain AL533_14235 PF00043 Glutathione S-transferase, C-terminal domain AL533_14240 PF05198 Translation initiation factor IF-3, N-terminal domain AL533_14240 PF00707 Translation initiation factor IF-3, C-terminal domain AL533_14245 PF02824 TGS domain AL533_14245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL533_14245 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL533_14245 PF03129 Anticodon binding domain AL533_14250 PF13193 AMP-binding enzyme C-terminal domain AL533_14250 PF00501 AMP-binding enzyme AL533_14255 PF04751 Protein of unknown function (DUF615) AL533_14260 PF00381 PTS HPr component phosphorylation site AL533_14265 PF03668 P-loop ATPase protein family AL533_14270 PF02569 Pantoate-beta-alanine ligase AL533_14275 PF02548 Ketopantoate hydroxymethyltransferase AL533_14280 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL533_14285 PF12627 Probable RNA and SrmB- binding site of polymerase A AL533_14285 PF01743 Poly A polymerase head domain AL533_14285 PF12626 Polymerase A arginine-rich C-terminus AL533_14295 PF03819 MazG nucleotide pyrophosphohydrolase domain AL533_14305 PF13291 ACT domain AL533_14305 PF02824 TGS domain AL533_14305 PF04607 Region found in RelA / SpoT proteins AL533_14310 PF05958 tRNA (Uracil-5-)-methyltransferase AL533_14320 PF00291 Pyridoxal-phosphate dependent enzyme AL533_14325 PF00672 HAMP domain AL533_14325 PF01627 Hpt domain AL533_14325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL533_14325 PF00512 His Kinase A (phospho-acceptor) domain AL533_14325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_14325 PF00072 Response regulator receiver domain AL533_14330 PF00378 Enoyl-CoA hydratase/isomerase AL533_14335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL533_14335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL533_14340 PF01261 Xylose isomerase-like TIM barrel AL533_14350 PF00106 short chain dehydrogenase AL533_14355 PF02233 NAD(P) transhydrogenase beta subunit AL533_14360 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AL533_14365 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL533_14365 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL533_14370 PF00892 EamA-like transporter family AL533_14380 PF07690 Major Facilitator Superfamily AL533_14410 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_14415 PF03358 NADPH-dependent FMN reductase AL533_14420 PF01758 Sodium Bile acid symporter family AL533_14430 PF01022 Bacterial regulatory protein, arsR family AL533_14435 PF03960 ArsC family AL533_14440 PF13411 MerR HTH family regulatory protein AL533_14460 PF00872 Transposase, Mutator family AL533_14475 PF00873 AcrB/AcrD/AcrF family AL533_14480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL533_14500 PF00394 Multicopper oxidase AL533_14500 PF07731 Multicopper oxidase AL533_14500 PF07732 Multicopper oxidase AL533_14510 PF00486 Transcriptional regulatory protein, C terminal AL533_14510 PF00072 Response regulator receiver domain AL533_14515 PF00672 HAMP domain AL533_14515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_14515 PF00512 His Kinase A (phospho-acceptor) domain AL533_14520 PF04945 YHS domain AL533_14590 PF00589 Phage integrase family AL533_14595 PF01207 Dihydrouridine synthase (Dus) AL533_14605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_14605 PF03466 LysR substrate binding domain AL533_14615 PF00899 ThiF family AL533_14620 PF00694 Aconitase C-terminal domain AL533_14620 PF00330 Aconitase family (aconitate hydratase) AL533_14625 PF01026 TatD related DNase AL533_14640 PF00009 Elongation factor Tu GTP binding domain AL533_14640 PF16658 Class II release factor RF3, C-terminal domain AL533_14640 PF03144 Elongation factor Tu domain 2 AL533_14650 PF11867 Domain of unknown function (DUF3387) AL533_14650 PF18766 SWI2/SNF2 ATPase AL533_14650 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AL533_14665 PF01420 Type I restriction modification DNA specificity domain AL533_14670 PF00270 DEAD/DEAH box helicase AL533_14670 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AL533_14670 PF17191 RecG wedge domain AL533_14675 PF02384 N-6 DNA Methylase AL533_14765 PF00563 EAL domain AL533_14765 PF03707 Bacterial signalling protein N terminal repeat AL533_14765 PF00990 Diguanylate cyclase, GGDEF domain AL533_14770 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AL533_14770 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AL533_14775 PF10369 Small subunit of acetolactate synthase AL533_14780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL533_14780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL533_14780 PF00205 Thiamine pyrophosphate enzyme, central domain AL533_14790 PF09334 tRNA synthetases class I (M) AL533_14790 PF13603 Leucyl-tRNA synthetase, Domain 2 AL533_14790 PF00133 tRNA synthetases class I (I, L, M and V) AL533_14790 PF08264 Anticodon-binding domain of tRNA AL533_14805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL533_14810 PF00005 ABC transporter AL533_14810 PF02687 FtsX-like permease family AL533_14810 PF12704 MacB-like periplasmic core domain AL533_14815 PF02321 Outer membrane efflux protein AL533_14830 PF00929 Exonuclease AL533_14835 PF03193 RsgA GTPase AL533_14845 PF00462 Glutaredoxin AL533_14850 PF02556 Preprotein translocase subunit SecB AL533_14860 PF01926 50S ribosome-binding GTPase AL533_14860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AL533_14865 PF13360 PQQ-like domain AL533_14865 PF01011 PQQ enzyme repeat AL533_14875 PF03129 Anticodon binding domain AL533_14875 PF13393 Histidyl-tRNA synthetase AL533_14880 PF04551 GcpE protein AL533_14885 PF13464 Domain of unknown function (DUF4115) AL533_14895 PF04055 Radical SAM superfamily AL533_14900 PF00334 Nucleoside diphosphate kinase AL533_14905 PF04384 Iron-sulphur cluster assembly AL533_14910 PF01569 PAP2 superfamily AL533_14915 PF00534 Glycosyl transferases group 1 AL533_14915 PF13439 Glycosyltransferase Family 4 AL533_14920 PF17804 Tail specific protease N-terminal domain AL533_14920 PF03572 Peptidase family S41 AL533_14920 PF11818 C-terminal domain of tail specific protease (DUF3340) AL533_14920 PF00595 PDZ domain AL533_14925 PF00933 Glycosyl hydrolase family 3 N terminal domain AL533_14935 PF12697 Alpha/beta hydrolase family AL533_14940 PF00171 Aldehyde dehydrogenase family AL533_14945 PF00171 Aldehyde dehydrogenase family AL533_14950 PF01202 Shikimate kinase AL533_14955 PF02447 GntP family permease AL533_14960 PF01081 KDPG and KHG aldolase AL533_14965 PF00920 Dehydratase family AL533_14970 PF00871 Acetokinase family AL533_14975 PF07085 DRTGG domain AL533_14975 PF01515 Phosphate acetyl/butaryl transferase AL533_14980 PF05683 Fumarase C-terminus AL533_14980 PF05681 Fumarate hydratase (Fumerase) AL533_14990 PF00872 Transposase, Mutator family AL533_15000 PF10431 C-terminal, D2-small domain, of ClpB protein AL533_15000 PF06689 ClpX C4-type zinc finger AL533_15000 PF07724 AAA domain (Cdc48 subfamily) AL533_15005 PF00574 Clp protease AL533_15010 PF05697 Bacterial trigger factor protein (TF) AL533_15010 PF05698 Bacterial trigger factor protein (TF) C-terminus AL533_15010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL533_15015 PF00593 TonB dependent receptor AL533_15015 PF07715 TonB-dependent Receptor Plug Domain AL533_15020 PF18331 PKHD-type hydroxylase C-terminal domain AL533_15020 PF13640 2OG-Fe(II) oxygenase superfamily AL533_15025 PF00682 HMGL-like AL533_15025 PF08502 LeuA allosteric (dimerisation) domain AL533_15030 PF00561 alpha/beta hydrolase fold AL533_15035 PF00561 alpha/beta hydrolase fold AL533_15035 PF07021 Methionine biosynthesis protein MetW AL533_15045 PF01725 Ham1 family AL533_15055 PF02416 mttA/Hcf106 family AL533_15060 PF02416 mttA/Hcf106 family AL533_15065 PF00902 Sec-independent protein translocase protein (TatC) AL533_15085 PF01790 Prolipoprotein diacylglyceryl transferase AL533_15100 PF00303 Thymidylate synthase AL533_15105 PF00186 Dihydrofolate reductase AL533_15120 PF01625 Peptide methionine sulfoxide reductase AL533_15125 PF02472 Biopolymer transport protein ExbD/TolR AL533_15130 PF01618 MotA/TolQ/ExbB proton channel family AL533_15140 PF01842 ACT domain AL533_15140 PF00551 Formyl transferase AL533_15150 PF00171 Aldehyde dehydrogenase family AL533_15155 PF00830 Ribosomal L28 family AL533_15160 PF00471 Ribosomal protein L33 AL533_15165 PF00999 Sodium/hydrogen exchanger family AL533_15165 PF02254 TrkA-N domain AL533_15185 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AL533_15190 PF13361 UvrD-like helicase C-terminal domain AL533_15190 PF00580 UvrD/REP helicase N-terminal domain AL533_15210 PF01396 Topoisomerase DNA binding C4 zinc finger AL533_15210 PF08272 Topoisomerase I zinc-ribbon-like AL533_15210 PF01131 DNA topoisomerase AL533_15210 PF01751 Toprim domain AL533_15220 PF01638 HxlR-like helix-turn-helix AL533_15225 PF00107 Zinc-binding dehydrogenase AL533_15225 PF08240 Alcohol dehydrogenase GroES-like domain AL533_15230 PF04102 SlyX AL533_15245 PF01810 LysE type translocator AL533_15250 PF03279 Bacterial lipid A biosynthesis acyltransferase AL533_15260 PF00375 Sodium:dicarboxylate symporter family AL533_15270 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL533_15270 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL533_15290 PF01416 tRNA pseudouridine synthase AL533_15300 PF01176 Translation initiation factor 1A / IF-1 AL533_15315 PF00180 Isocitrate/isopropylmalate dehydrogenase AL533_15325 PF00694 Aconitase C-terminal domain AL533_15330 PF00330 Aconitase family (aconitate hydratase) AL533_15340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_15340 PF03466 LysR substrate binding domain AL533_15365 PF00293 NUDIX domain AL533_15370 PF01590 GAF domain AL533_15370 PF05524 PEP-utilising enzyme, N-terminal AL533_15370 PF00391 PEP-utilising enzyme, mobile domain AL533_15370 PF02896 PEP-utilising enzyme, TIM barrel domain AL533_15375 PF00141 Peroxidase AL533_15380 PF12706 Beta-lactamase superfamily domain AL533_15385 PF03466 LysR substrate binding domain AL533_15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_15395 PF02798 Glutathione S-transferase, N-terminal domain AL533_15400 PF13280 WYL domain AL533_15400 PF08279 HTH domain AL533_15410 PF00849 RNA pseudouridylate synthase AL533_15410 PF01479 S4 domain AL533_15420 PF00575 S1 RNA binding domain AL533_15420 PF10150 Ribonuclease E/G family AL533_15420 PF12111 Polyribonucleotide phosphorylase C terminal AL533_15425 PF00501 AMP-binding enzyme AL533_15425 PF13193 AMP-binding enzyme C-terminal domain AL533_15440 PF03466 LysR substrate binding domain AL533_15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_15450 PF06969 HemN C-terminal domain AL533_15450 PF04055 Radical SAM superfamily AL533_15460 PF01554 MatE AL533_15465 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AL533_15465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_15465 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_15470 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AL533_15470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_15475 PF03109 ABC1 family AL533_15480 PF01197 Ribosomal protein L31 AL533_15490 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AL533_15510 PF03884 DNA gyrase inhibitor YacG AL533_15515 PF00753 Metallo-beta-lactamase superfamily AL533_15520 PF00762 Ferrochelatase AL533_15530 PF01177 Asp/Glu/Hydantoin racemase AL533_15550 PF01206 Sulfurtransferase TusA AL533_15555 PF00571 CBS domain AL533_15555 PF03471 Transporter associated domain AL533_15560 PF00795 Carbon-nitrogen hydrolase AL533_15565 PF01588 Putative tRNA binding domain AL533_15575 PF07963 Prokaryotic N-terminal methylation motif AL533_15575 PF08334 Type II secretion system (T2SS), protein G AL533_15580 PF00482 Type II secretion system (T2SS), protein F AL533_15585 PF00270 DEAD/DEAH box helicase AL533_15585 PF18074 Primosomal protein N C-terminal domain AL533_15585 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AL533_15585 PF00271 Helicase conserved C-terminal domain AL533_15585 PF17764 3′ DNA-binding domain (3′BD) AL533_15590 PF02254 TrkA-N domain AL533_15590 PF00999 Sodium/hydrogen exchanger family AL533_15595 PF01430 Hsp33 protein AL533_15605 PF00226 DnaJ domain AL533_15605 PF01556 DnaJ C terminal domain AL533_15615 PF01544 CorA-like Mg2+ transporter protein AL533_15620 PF01138 3' exoribonuclease family, domain 1 AL533_15620 PF00575 S1 RNA binding domain AL533_15620 PF03725 3' exoribonuclease family, domain 2 AL533_15620 PF00013 KH domain AL533_15620 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AL533_15625 PF00312 Ribosomal protein S15 AL533_15635 PF13538 UvrD-like helicase C-terminal domain AL533_15640 PF00580 UvrD/REP helicase N-terminal domain AL533_15640 PF13361 UvrD-like helicase C-terminal domain AL533_15640 PF12705 PD-(D/E)XK nuclease superfamily AL533_15645 PF17946 RecC C-terminal domain AL533_15655 PF07690 Major Facilitator Superfamily AL533_15660 PF03976 Polyphosphate kinase 2 (PPK2) AL533_15670 PF01209 ubiE/COQ5 methyltransferase family AL533_15680 PF03109 ABC1 family AL533_15685 PF01494 FAD binding domain AL533_15690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL533_15695 PF01502 Phosphoribosyl-AMP cyclohydrolase AL533_15710 PF00361 Proton-conducting membrane transporter AL533_15710 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AL533_15710 PF13244 Domain of unknown function (DUF4040) AL533_15710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AL533_15715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AL533_15720 PF00361 Proton-conducting membrane transporter AL533_15730 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AL533_15740 PF02033 Ribosome-binding factor A AL533_15745 PF00009 Elongation factor Tu GTP binding domain AL533_15745 PF04760 Translation initiation factor IF-2, N-terminal region AL533_15745 PF08364 Bacterial translation initiation factor IF-2 associated region AL533_15745 PF11987 Translation-initiation factor 2 AL533_15750 PF00575 S1 RNA binding domain AL533_15750 PF08529 NusA N-terminal domain AL533_15750 PF13184 NusA-like KH domain AL533_15755 PF17384 RimP C-terminal SH3 domain AL533_15755 PF02576 RimP N-terminal domain AL533_15775 PF03840 Preprotein translocase SecG subunit AL533_15780 PF00121 Triosephosphate isomerase AL533_15785 PF00437 Type II/IV secretion system protein AL533_15785 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL533_15790 PF00482 Type II secretion system (T2SS), protein F AL533_15795 PF06750 Bacterial Peptidase A24 N-terminal domain AL533_15795 PF01478 Type IV leader peptidase family AL533_15800 PF01121 Dephospho-CoA kinase AL533_15810 PF00588 SpoU rRNA Methylase family AL533_15810 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL533_15815 PF06865 Pyrimidine/purine nucleoside phosphorylase AL533_15825 PF02463 RecF/RecN/SMC N terminal domain AL533_15830 PF02622 Uncharacterized ACR, COG1678 AL533_15835 PF03652 Holliday junction resolvase AL533_15840 PF13533 Biotin-lipoyl like AL533_15850 PF04632 Fusaric acid resistance protein family AL533_15865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL533_15865 PF12833 Helix-turn-helix domain AL533_15865 PF02805 Metal binding domain of Ada AL533_15865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL533_15870 PF01066 CDP-alcohol phosphatidyltransferase AL533_15880 PF08459 UvrC Helix-hairpin-helix N-terminal AL533_15880 PF02151 UvrB/uvrC motif AL533_15880 PF01541 GIY-YIG catalytic domain AL533_15910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL533_15910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL533_15910 PF00378 Enoyl-CoA hydratase/isomerase AL533_15915 PF02803 Thiolase, C-terminal domain AL533_15915 PF00108 Thiolase, N-terminal domain AL533_15930 PF00376 MerR family regulatory protein AL533_15930 PF09278 MerR, DNA binding AL533_15940 PF01323 DSBA-like thioredoxin domain AL533_15955 PF00183 Hsp90 protein AL533_15955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_15970 PF03553 Na+/H+ antiporter family AL533_15970 PF13726 Na+-H+ antiporter family AL533_15975 PF00561 alpha/beta hydrolase fold AL533_16000 PF04997 RNA polymerase Rpb1, domain 1 AL533_16000 PF00623 RNA polymerase Rpb1, domain 2 AL533_16000 PF05000 RNA polymerase Rpb1, domain 4 AL533_16000 PF04998 RNA polymerase Rpb1, domain 5 AL533_16000 PF04983 RNA polymerase Rpb1, domain 3 AL533_16005 PF00562 RNA polymerase Rpb2, domain 6 AL533_16005 PF04565 RNA polymerase Rpb2, domain 3 AL533_16005 PF04560 RNA polymerase Rpb2, domain 7 AL533_16005 PF10385 RNA polymerase beta subunit external 1 domain AL533_16005 PF04561 RNA polymerase Rpb2, domain 2 AL533_16005 PF04563 RNA polymerase beta subunit AL533_16010 PF00542 Ribosomal protein L7/L12 C-terminal domain AL533_16010 PF16320 Ribosomal protein L7/L12 dimerisation domain AL533_16015 PF00466 Ribosomal protein L10 AL533_16020 PF00687 Ribosomal protein L1p/L10e family AL533_16025 PF03946 Ribosomal protein L11, N-terminal domain AL533_16025 PF00298 Ribosomal protein L11, RNA binding domain AL533_16030 PF00467 KOW motif AL533_16030 PF02357 Transcription termination factor nusG AL533_16035 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AL533_16045 PF00009 Elongation factor Tu GTP binding domain AL533_16045 PF03144 Elongation factor Tu domain 2 AL533_16045 PF03143 Elongation factor Tu C-terminal domain AL533_16070 PF00425 chorismate binding enzyme AL533_16070 PF04715 Anthranilate synthase component I, N terminal region AL533_16075 PF13419 Haloacid dehalogenase-like hydrolase AL533_16080 PF12401 Protein of unknown function (DUF2662) AL533_16080 PF00498 FHA domain AL533_16085 PF03958 Bacterial type II/III secretion system short domain AL533_16085 PF00263 Bacterial type II and III secretion system protein AL533_16100 PF00816 H-NS histone family AL533_16125 PF03900 Porphobilinogen deaminase, C-terminal domain AL533_16125 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AL533_16130 PF00072 Response regulator receiver domain AL533_16130 PF04397 LytTr DNA-binding domain AL533_16135 PF06580 Histidine kinase AL533_16135 PF07694 5TMR of 5TMR-LYT AL533_16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_16140 PF00206 Lyase AL533_16140 PF14698 Argininosuccinate lyase C-terminal AL533_16145 PF04362 Bacterial Fe(2+) trafficking AL533_16150 PF01895 PhoU domain AL533_16155 PF02321 Outer membrane efflux protein AL533_16160 PF00892 EamA-like transporter family AL533_16175 PF01964 Radical SAM ThiC family AL533_16175 PF13667 ThiC-associated domain AL533_16180 PF00293 NUDIX domain AL533_16185 PF00149 Calcineurin-like phosphoesterase AL533_16190 PF01258 Prokaryotic dksA/traR C4-type zinc finger AL533_16195 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL533_16200 PF01098 Cell cycle protein AL533_16205 PF02875 Mur ligase family, glutamate ligase domain AL533_16205 PF08245 Mur ligase middle domain AL533_16215 PF07664 Ferrous iron transport protein B C terminus AL533_16215 PF02421 Ferrous iron transport protein B AL533_16215 PF07670 Nucleoside recognition AL533_16225 PF00589 Phage integrase family AL533_16225 PF02899 Phage integrase, N-terminal SAM-like domain AL533_16230 PF10411 Disulfide bond isomerase protein N-terminus AL533_16230 PF13098 Thioredoxin-like domain AL533_16235 PF00742 Homoserine dehydrogenase AL533_16235 PF01842 ACT domain AL533_16235 PF03447 Homoserine dehydrogenase, NAD binding domain AL533_16240 PF00291 Pyridoxal-phosphate dependent enzyme AL533_16245 PF00768 D-alanyl-D-alanine carboxypeptidase AL533_16250 PF00196 Bacterial regulatory proteins, luxR family AL533_16250 PF00072 Response regulator receiver domain AL533_16255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_16255 PF00512 His Kinase A (phospho-acceptor) domain AL533_16260 PF02954 Bacterial regulatory protein, Fis family AL533_16260 PF00072 Response regulator receiver domain AL533_16260 PF00158 Sigma-54 interaction domain AL533_16265 PF00595 PDZ domain AL533_16265 PF03572 Peptidase family S41 AL533_16270 PF01676 Metalloenzyme superfamily AL533_16270 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AL533_16275 PF03739 Lipopolysaccharide export system permease LptF/LptG AL533_16285 PF02789 Cytosol aminopeptidase family, N-terminal domain AL533_16285 PF00883 Cytosol aminopeptidase family, catalytic domain AL533_16305 PF00677 Lumazine binding domain AL533_16315 PF01872 RibD C-terminal domain AL533_16315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL533_16320 PF03477 ATP cone domain AL533_16325 PF00909 Ammonium Transporter Family AL533_16330 PF00543 Nitrogen regulatory protein P-II AL533_16340 PF01078 Magnesium chelatase, subunit ChlI AL533_16340 PF13335 Magnesium chelatase, subunit ChlI C-terminal AL533_16345 PF00392 Bacterial regulatory proteins, gntR family AL533_16345 PF00155 Aminotransferase class I and II AL533_16350 PF00596 Class II Aldolase and Adducin N-terminal domain AL533_16355 PF00701 Dihydrodipicolinate synthetase family AL533_16365 PF03573 outer membrane porin, OprD family AL533_16370 PF00719 Inorganic pyrophosphatase AL533_16385 PF00501 AMP-binding enzyme AL533_16385 PF13193 AMP-binding enzyme C-terminal domain AL533_16390 PF03989 DNA gyrase C-terminal domain, beta-propeller AL533_16390 PF00521 DNA gyrase/topoisomerase IV, subunit A AL533_16395 PF07690 Major Facilitator Superfamily AL533_16400 PF03458 UPF0126 domain AL533_16405 PF02810 SEC-C motif AL533_16410 PF03471 Transporter associated domain AL533_16410 PF03741 Integral membrane protein TerC family AL533_16415 PF03641 Possible lysine decarboxylase AL533_16420 PF07690 Major Facilitator Superfamily AL533_16430 PF00817 impB/mucB/samB family AL533_16430 PF11798 IMS family HHH motif AL533_16430 PF11799 impB/mucB/samB family C-terminal domain AL533_16445 PF08497 Radical SAM N-terminal AL533_16445 PF04055 Radical SAM superfamily AL533_16445 PF11842 Domain of unknown function (DUF3362) AL533_16465 PF03358 NADPH-dependent FMN reductase AL533_16480 PF00291 Pyridoxal-phosphate dependent enzyme AL533_16515 PF00440 Bacterial regulatory proteins, tetR family AL533_16540 PF01327 Polypeptide deformylase AL533_16550 PF02481 DNA recombination-mediator protein A AL533_16550 PF17782 DprA winged helix domain AL533_16555 PF01300 Telomere recombination AL533_16560 PF00892 EamA-like transporter family AL533_16565 PF00440 Bacterial regulatory proteins, tetR family AL533_16570 PF07690 Major Facilitator Superfamily AL533_16580 PF00255 Glutathione peroxidase AL533_16590 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AL533_16595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL533_16595 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL533_16600 PF00231 ATP synthase AL533_16605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL533_16605 PF00306 ATP synthase alpha/beta chain, C terminal domain AL533_16605 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL533_16610 PF00213 ATP synthase delta (OSCP) subunit AL533_16615 PF00430 ATP synthase B/B' CF(0) AL533_16620 PF00137 ATP synthase subunit C AL533_16625 PF00119 ATP synthase A chain AL533_16645 PF00005 ABC transporter AL533_16650 PF00950 ABC 3 transport family AL533_16655 PF01810 LysE type translocator AL533_16660 PF04261 Dyp-type peroxidase family AL533_16665 PF00390 Malic enzyme, N-terminal domain AL533_16665 PF03949 Malic enzyme, NAD binding domain AL533_16670 PF03485 Arginyl tRNA synthetase N terminal domain AL533_16670 PF00750 tRNA synthetases class I (R) AL533_16670 PF05746 DALR anticodon binding domain AL533_16690 PF02678 Pirin AL533_16690 PF05726 Pirin C-terminal cupin domain AL533_16700 PF03551 Transcriptional regulator PadR-like family AL533_16705 PF13302 Acetyltransferase (GNAT) domain AL533_16710 PF02540 NAD synthase AL533_16710 PF00958 GMP synthase C terminal domain AL533_16710 PF00117 Glutamine amidotransferase class-I AL533_16715 PF04286 Protein of unknown function (DUF445) AL533_16715 PF04286 Protein of unknown function (DUF445) AL533_16720 PF07681 DoxX AL533_16725 PF09335 SNARE associated Golgi protein AL533_16740 PF13614 AAA domain AL533_16750 PF01722 BolA-like protein AL533_16765 PF01648 4'-phosphopantetheinyl transferase superfamily AL533_16770 PF16363 GDP-mannose 4,6 dehydratase AL533_16785 PF00975 Thioesterase domain AL533_16785 PF00550 Phosphopantetheine attachment site AL533_16785 PF00668 Condensation domain AL533_16785 PF13193 AMP-binding enzyme C-terminal domain AL533_16785 PF00501 AMP-binding enzyme AL533_16790 PF00550 Phosphopantetheine attachment site AL533_16790 PF08659 KR domain AL533_16790 PF00698 Acyl transferase domain AL533_16790 PF16197 Ketoacyl-synthetase C-terminal extension AL533_16790 PF00109 Beta-ketoacyl synthase, N-terminal domain AL533_16790 PF14765 Polyketide synthase dehydratase AL533_16790 PF02801 Beta-ketoacyl synthase, C-terminal domain AL533_16795 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_16795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_16795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_16800 PF00501 AMP-binding enzyme AL533_16815 PF00765 Autoinducer synthase AL533_16820 PF07690 Major Facilitator Superfamily AL533_16820 PF00083 Sugar (and other) transporter AL533_16825 PF00378 Enoyl-CoA hydratase/isomerase AL533_16830 PF00378 Enoyl-CoA hydratase/isomerase AL533_16835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL533_16835 PF02770 Acyl-CoA dehydrogenase, middle domain AL533_16835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL533_16840 PF00501 AMP-binding enzyme AL533_16840 PF13193 AMP-binding enzyme C-terminal domain AL533_16845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL533_16845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL533_16850 PF00171 Aldehyde dehydrogenase family AL533_16860 PF00324 Amino acid permease AL533_16865 PF00324 Amino acid permease AL533_16870 PF01042 Endoribonuclease L-PSP AL533_16875 PF01168 Alanine racemase, N-terminal domain AL533_16875 PF00842 Alanine racemase, C-terminal domain AL533_16880 PF01266 FAD dependent oxidoreductase AL533_16885 PF01037 Lrp/AsnC ligand binding domain AL533_16895 PF00593 TonB dependent receptor AL533_16895 PF07715 TonB-dependent Receptor Plug Domain AL533_16910 PF00849 RNA pseudouridylate synthase AL533_16930 PF02801 Beta-ketoacyl synthase, C-terminal domain AL533_16930 PF00109 Beta-ketoacyl synthase, N-terminal domain AL533_16960 PF01844 HNH endonuclease AL533_16965 PF00694 Aconitase C-terminal domain AL533_16965 PF00330 Aconitase family (aconitate hydratase) AL533_16970 PF00285 Citrate synthase, C-terminal domain AL533_16980 PF07729 FCD domain AL533_16980 PF00392 Bacterial regulatory proteins, gntR family AL533_16990 PF00155 Aminotransferase class I and II AL533_16995 PF09330 D-lactate dehydrogenase, membrane binding AL533_16995 PF01565 FAD binding domain AL533_17000 PF01070 FMN-dependent dehydrogenase AL533_17005 PF00392 Bacterial regulatory proteins, gntR family AL533_17005 PF07729 FCD domain AL533_17010 PF02652 L-lactate permease AL533_17015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL533_17015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL533_17015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL533_17015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL533_17025 PF16363 GDP-mannose 4,6 dehydratase AL533_17030 PF00342 Phosphoglucose isomerase AL533_17035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL533_17035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL533_17035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL533_17040 PF00483 Nucleotidyl transferase AL533_17045 PF02397 Bacterial sugar transferase AL533_17050 PF00534 Glycosyl transferases group 1 AL533_17050 PF13477 Glycosyl transferase 4-like AL533_17055 PF13439 Glycosyltransferase Family 4 AL533_17055 PF00534 Glycosyl transferases group 1 AL533_17065 PF13439 Glycosyltransferase Family 4 AL533_17065 PF00534 Glycosyl transferases group 1 AL533_17070 PF00535 Glycosyl transferase family 2 AL533_17080 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AL533_17085 PF05523 WxcM-like, C-terminal AL533_17090 PF00483 Nucleotidyl transferase AL533_17095 PF16363 GDP-mannose 4,6 dehydratase AL533_17100 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL533_17100 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL533_17100 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL533_17105 PF02563 Polysaccharide biosynthesis/export protein AL533_17105 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AL533_17105 PF10531 SLBB domain AL533_17110 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL533_17115 PF02706 Chain length determinant protein AL533_17115 PF13807 G-rich domain on putative tyrosine kinase AL533_17115 PF13614 AAA domain AL533_17120 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL533_17120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL533_17125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL533_17125 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL533_17130 PF03023 Lipid II flippase MurJ AL533_17135 PF01510 N-acetylmuramoyl-L-alanine amidase AL533_17140 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AL533_17140 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AL533_17150 PF05506 Domain of unknown function (DUF756) AL533_17150 PF04185 Phosphoesterase family AL533_17160 PF03725 3' exoribonuclease family, domain 2 AL533_17160 PF01138 3' exoribonuclease family, domain 1 AL533_17165 PF00487 Fatty acid desaturase AL533_17170 PF00175 Oxidoreductase NAD-binding domain AL533_17175 PF00440 Bacterial regulatory proteins, tetR family AL533_17180 PF08360 QacR-like protein, C-terminal region AL533_17180 PF00440 Bacterial regulatory proteins, tetR family AL533_17185 PF01323 DSBA-like thioredoxin domain AL533_17195 PF13419 Haloacid dehalogenase-like hydrolase AL533_17200 PF00106 short chain dehydrogenase AL533_17215 PF00583 Acetyltransferase (GNAT) family AL533_17215 PF00696 Amino acid kinase family AL533_17220 PF09084 NMT1/THI5 like AL533_17225 PF09084 NMT1/THI5 like AL533_17230 PF00296 Luciferase-like monooxygenase AL533_17235 PF00528 Binding-protein-dependent transport system inner membrane component AL533_17240 PF00005 ABC transporter AL533_17245 PF08362 YcdC-like protein, C-terminal region AL533_17245 PF00440 Bacterial regulatory proteins, tetR family AL533_17250 PF01048 Phosphorylase superfamily AL533_17260 PF06574 FAD synthetase AL533_17260 PF01687 Riboflavin kinase AL533_17265 PF00133 tRNA synthetases class I (I, L, M and V) AL533_17265 PF08264 Anticodon-binding domain of tRNA AL533_17265 PF06827 Zinc finger found in FPG and IleRS AL533_17270 PF01252 Signal peptidase (SPase) II AL533_17275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL533_17315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL533_17320 PF07859 alpha/beta hydrolase fold AL533_17345 PF01025 GrpE AL533_17350 PF00012 Hsp70 protein AL533_17370 PF13406 Transglycosylase SLT domain AL533_17375 PF02222 ATP-grasp domain AL533_17375 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AL533_17380 PF00731 AIR carboxylase AL533_17395 PF02875 Mur ligase family, glutamate ligase domain AL533_17395 PF01225 Mur ligase family, catalytic domain AL533_17395 PF08245 Mur ligase middle domain AL533_17405 PF01569 PAP2 superfamily AL533_17410 PF03741 Integral membrane protein TerC family AL533_17420 PF03738 Glutathionylspermidine synthase preATP-grasp AL533_17425 PF00355 Rieske [2Fe-2S] domain AL533_17430 PF01979 Amidohydrolase family AL533_17435 PF00156 Phosphoribosyl transferase domain AL533_17445 PF10411 Disulfide bond isomerase protein N-terminus AL533_17445 PF13098 Thioredoxin-like domain AL533_17455 PF02583 Metal-sensitive transcriptional repressor AL533_17460 PF01926 50S ribosome-binding GTPase AL533_17460 PF12631 MnmE helical domain AL533_17460 PF10396 GTP-binding protein TrmE N-terminus AL533_17465 PF02096 60Kd inner membrane protein AL533_17465 PF14849 YidC periplasmic domain AL533_17470 PF01809 Putative membrane protein insertion efficiency factor AL533_17475 PF00825 Ribonuclease P AL533_17480 PF00468 Ribosomal protein L34 AL533_17485 PF11638 DnaA N-terminal domain AL533_17485 PF08299 Bacterial dnaA protein helix-turn-helix AL533_17485 PF00308 Bacterial dnaA protein AL533_17490 PF02768 DNA polymerase III beta subunit, C-terminal domain AL533_17490 PF02767 DNA polymerase III beta subunit, central domain AL533_17490 PF00712 DNA polymerase III beta subunit, N-terminal domain AL533_17495 PF02463 RecF/RecN/SMC N terminal domain AL533_17500 PF01751 Toprim domain AL533_17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_17500 PF00986 DNA gyrase B subunit, carboxyl terminus AL533_17500 PF00204 DNA gyrase B AL533_17500 PF18053 DNA gyrase B subunit insert domain AL533_17510 PF09335 SNARE associated Golgi protein AL533_17515 PF00005 ABC transporter AL533_17515 PF12848 ABC transporter AL533_17535 PF01521 Iron-sulphur cluster biosynthesis AL533_17540 PF00561 alpha/beta hydrolase fold AL533_17545 PF03702 Anhydro-N-acetylmuramic acid kinase AL533_17550 PF00579 tRNA synthetases class I (W and Y) AL533_17590 PF00209 Sodium:neurotransmitter symporter family AL533_17600 PF01029 NusB family AL533_17600 PF01189 16S rRNA methyltransferase RsmB/F AL533_17605 PF00551 Formyl transferase AL533_17605 PF02911 Formyl transferase, C-terminal domain AL533_17610 PF00920 Dehydratase family AL533_17625 PF03466 LysR substrate binding domain AL533_17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_17630 PF00860 Permease family AL533_17635 PF00311 Phosphoenolpyruvate carboxylase AL533_17640 PF08361 MAATS-type transcriptional repressor, C-terminal region AL533_17640 PF00440 Bacterial regulatory proteins, tetR family AL533_17645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL533_17650 PF00873 AcrB/AcrD/AcrF family AL533_17660 PF00226 DnaJ domain AL533_17660 PF01556 DnaJ C terminal domain AL533_17660 PF00684 DnaJ central domain AL533_17670 PF01113 Dihydrodipicolinate reductase, N-terminus AL533_17670 PF05173 Dihydrodipicolinate reductase, C-terminus AL533_17680 PF07690 Major Facilitator Superfamily AL533_17685 PF00248 Aldo/keto reductase family AL533_17690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_17690 PF03466 LysR substrate binding domain AL533_17705 PF00392 Bacterial regulatory proteins, gntR family AL533_17705 PF00155 Aminotransferase class I and II AL533_17710 PF00107 Zinc-binding dehydrogenase AL533_17710 PF08240 Alcohol dehydrogenase GroES-like domain AL533_17715 PF03352 Methyladenine glycosylase AL533_17730 PF00633 Helix-hairpin-helix motif AL533_17730 PF14815 NUDIX domain AL533_17730 PF10576 Iron-sulfur binding domain of endonuclease III AL533_17730 PF00730 HhH-GPD superfamily base excision DNA repair protein AL533_17745 PF07043 Protein of unknown function (DUF1328) AL533_17750 PF03692 Putative zinc- or iron-chelating domain AL533_17755 PF07995 Glucose / Sorbosone dehydrogenase AL533_17760 PF16193 AAA C-terminal domain AL533_17760 PF12002 MgsA AAA+ ATPase C terminal AL533_17760 PF00004 ATPase family associated with various cellular activities (AAA) AL533_17765 PF01226 Formate/nitrite transporter AL533_17775 PF01259 SAICAR synthetase AL533_17785 PF00701 Dihydrodipicolinate synthetase family AL533_17790 PF00857 Isochorismatase family AL533_17795 PF01758 Sodium Bile acid symporter family AL533_17800 PF01554 MatE AL533_17805 PF04463 Protein of unknown function (DUF523) AL533_17810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL533_17820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL533_17825 PF02798 Glutathione S-transferase, N-terminal domain AL533_17825 PF14497 Glutathione S-transferase, C-terminal domain AL533_17835 PF00324 Amino acid permease AL533_17845 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL533_17845 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL533_17855 PF07702 UTRA domain AL533_17855 PF00392 Bacterial regulatory proteins, gntR family AL533_17860 PF05962 HutD AL533_17865 PF17392 Urocanase C-terminal domain AL533_17865 PF01175 Urocanase Rossmann-like domain AL533_17865 PF17391 Urocanase N-terminal domain AL533_17870 PF00221 Aromatic amino acid lyase AL533_17875 PF00324 Amino acid permease AL533_17880 PF01979 Amidohydrolase family AL533_17885 PF00491 Arginase family AL533_17900 PF01177 Asp/Glu/Hydantoin racemase AL533_17910 PF01380 SIS domain AL533_17915 PF00132 Bacterial transferase hexapeptide (six repeats) AL533_17915 PF14602 Hexapeptide repeat of succinyl-transferase AL533_17915 PF12804 MobA-like NTP transferase domain AL533_17920 PF04608 Phosphatidylglycerophosphatase A AL533_17925 PF02769 AIR synthase related protein, C-terminal domain AL533_17925 PF00586 AIR synthase related protein, N-terminal domain AL533_17930 PF01029 NusB family AL533_17935 PF00885 6,7-dimethyl-8-ribityllumazine synthase AL533_17940 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL533_17940 PF00925 GTP cyclohydrolase II AL533_17970 PF02580 D-Tyr-tRNA(Tyr) deacylase AL533_17975 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AL533_17975 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AL533_17980 PF00581 Rhodanese-like domain AL533_17985 PF02666 Phosphatidylserine decarboxylase AL533_18000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_18000 PF11808 Phosphate regulon sensor protein PhoR AL533_18000 PF00989 PAS fold AL533_18000 PF00512 His Kinase A (phospho-acceptor) domain AL533_18005 PF00486 Transcriptional regulatory protein, C terminal AL533_18005 PF00072 Response regulator receiver domain AL533_18015 PF00106 short chain dehydrogenase AL533_18020 PF01554 MatE AL533_18030 PF01425 Amidase AL533_18040 PF00155 Aminotransferase class I and II AL533_18045 PF04286 Protein of unknown function (DUF445) AL533_18060 PF04262 Glutamate-cysteine ligase AL533_18065 PF02600 Disulfide bond formation protein DsbB AL533_18070 PF04717 Type VI secretion system, phage-baseplate injector AL533_18080 PF00746 LPXTG cell wall anchor motif AL533_18080 PF04650 YSIRK type signal peptide AL533_18080 PF03373 Octapeptide repeat AL533_18080 PF01476 LysM domain AL533_18080 PF02216 B domain AL533_18110 PF05728 Uncharacterised protein family (UPF0227) AL533_18115 PF00204 DNA gyrase B AL533_18115 PF01751 Toprim domain AL533_18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_18115 PF00986 DNA gyrase B subunit, carboxyl terminus AL533_18120 PF04115 Ureidoglycolate lyase AL533_18125 PF03561 Allantoicase repeat AL533_18130 PF01494 FAD binding domain AL533_18140 PF00860 Permease family AL533_18145 PF00576 HIUase/Transthyretin family AL533_18175 PF02683 Cytochrome C biogenesis protein transmembrane region AL533_18175 PF11412 Disulphide bond corrector protein DsbC AL533_18180 PF07694 5TMR of 5TMR-LYT AL533_18180 PF00990 Diguanylate cyclase, GGDEF domain AL533_18185 PF07859 alpha/beta hydrolase fold AL533_18195 PF03960 ArsC family AL533_18200 PF03372 Endonuclease/Exonuclease/phosphatase family AL533_18205 PF00156 Phosphoribosyl transferase domain AL533_18210 PF00593 TonB dependent receptor AL533_18210 PF07715 TonB-dependent Receptor Plug Domain AL533_18220 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AL533_18220 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AL533_18230 PF04101 Glycosyltransferase family 28 C-terminal domain AL533_18230 PF03033 Glycosyltransferase family 28 N-terminal domain AL533_18235 PF08245 Mur ligase middle domain AL533_18235 PF02875 Mur ligase family, glutamate ligase domain AL533_18235 PF01225 Mur ligase family, catalytic domain AL533_18240 PF01820 D-ala D-ala ligase N-terminus AL533_18240 PF07478 D-ala D-ala ligase C-terminus AL533_18245 PF08478 POTRA domain, FtsQ-type AL533_18245 PF03799 Cell division protein FtsQ AL533_18250 PF02491 SHS2 domain inserted in FTSA AL533_18255 PF00091 Tubulin/FtsZ family, GTPase domain AL533_18255 PF12327 FtsZ family, C-terminal domain AL533_18260 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AL533_18270 PF01551 Peptidase family M23 AL533_18275 PF00456 Transketolase, thiamine diphosphate binding domain AL533_18275 PF17831 Pyruvate dehydrogenase E1 component middle domain AL533_18280 PF02817 e3 binding domain AL533_18280 PF00364 Biotin-requiring enzyme AL533_18280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL533_18290 PF01169 Uncharacterized protein family UPF0016 AL533_18295 PF01613 Flavin reductase like domain AL533_18295 PF00258 Flavodoxin AL533_18300 PF03692 Putative zinc- or iron-chelating domain AL533_18305 PF00478 IMP dehydrogenase / GMP reductase domain AL533_18305 PF00571 CBS domain AL533_18310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL533_18310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL533_18310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL533_18310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL533_18315 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AL533_18315 PF01243 Pyridoxamine 5'-phosphate oxidase AL533_18320 PF01368 DHH family AL533_18320 PF17768 RecJ OB domain AL533_18320 PF02272 DHHA1 domain AL533_18340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL533_18345 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AL533_18350 PF04452 RNA methyltransferase AL533_18355 PF00924 Mechanosensitive ion channel AL533_18355 PF05552 Conserved TM helix AL533_18365 PF00501 AMP-binding enzyme AL533_18365 PF16177 Acetyl-coenzyme A synthetase N-terminus AL533_18365 PF13193 AMP-binding enzyme C-terminal domain AL533_18370 PF00857 Isochorismatase family AL533_18375 PF01037 Lrp/AsnC ligand binding domain AL533_18380 PF00296 Luciferase-like monooxygenase AL533_18385 PF03358 NADPH-dependent FMN reductase AL533_18390 PF00196 Bacterial regulatory proteins, luxR family AL533_18390 PF00072 Response regulator receiver domain AL533_18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_18400 PF00672 HAMP domain AL533_18400 PF00512 His Kinase A (phospho-acceptor) domain AL533_18400 PF00072 Response regulator receiver domain AL533_18400 PF01627 Hpt domain AL533_18405 PF04341 Protein of unknown function, DUF485 AL533_18410 PF00474 Sodium:solute symporter family AL533_18420 PF02028 BCCT, betaine/carnitine/choline family transporter AL533_18435 PF17755 UvrA DNA-binding domain AL533_18435 PF17760 UvrA interaction domain AL533_18440 PF00440 Bacterial regulatory proteins, tetR family AL533_18440 PF16925 Tetracyclin repressor-like, C-terminal domain AL533_18445 PF00109 Beta-ketoacyl synthase, N-terminal domain AL533_18445 PF08659 KR domain AL533_18445 PF00107 Zinc-binding dehydrogenase AL533_18445 PF16197 Ketoacyl-synthetase C-terminal extension AL533_18445 PF08240 Alcohol dehydrogenase GroES-like domain AL533_18445 PF14765 Polyketide synthase dehydratase AL533_18445 PF00550 Phosphopantetheine attachment site AL533_18445 PF00698 Acyl transferase domain AL533_18445 PF02801 Beta-ketoacyl synthase, C-terminal domain AL533_18455 PF06942 GlpM protein AL533_18460 PF02581 Thiamine monophosphate synthase AL533_18460 PF03070 TENA/THI-4/PQQC family AL533_18460 PF08543 Phosphomethylpyrimidine kinase AL533_18470 PF07690 Major Facilitator Superfamily AL533_18475 PF00436 Single-strand binding protein family AL533_18485 PF03591 AzlC protein AL533_18495 PF00324 Amino acid permease AL533_18500 PF00392 Bacterial regulatory proteins, gntR family AL533_18500 PF00155 Aminotransferase class I and II AL533_18505 PF00202 Aminotransferase class-III AL533_18510 PF00171 Aldehyde dehydrogenase family AL533_18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_18520 PF00857 Isochorismatase family AL533_18525 PF02678 Pirin AL533_18525 PF05726 Pirin C-terminal cupin domain AL533_18530 PF01593 Flavin containing amine oxidoreductase AL533_18555 PF07690 Major Facilitator Superfamily AL533_18560 PF03466 LysR substrate binding domain AL533_18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL533_18580 PF00248 Aldo/keto reductase family AL533_18585 PF12833 Helix-turn-helix domain AL533_18585 PF02311 AraC-like ligand binding domain AL533_18615 PF01638 HxlR-like helix-turn-helix AL533_18620 PF02525 Flavodoxin-like fold AL533_18640 PF02705 K+ potassium transporter AL533_18670 PF00230 Major intrinsic protein AL533_18685 PF00977 Histidine biosynthesis protein AL533_18690 PF01636 Phosphotransferase enzyme family AL533_18715 PF00005 ABC transporter AL533_18720 PF00977 Histidine biosynthesis protein AL533_18735 PF00117 Glutamine amidotransferase class-I AL533_18740 PF00475 Imidazoleglycerol-phosphate dehydratase AL533_18760 PF00583 Acetyltransferase (GNAT) family AL533_18765 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AL533_18765 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AL533_18775 PF00512 His Kinase A (phospho-acceptor) domain AL533_18775 PF00672 HAMP domain AL533_18775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL533_18780 PF00486 Transcriptional regulatory protein, C terminal AL533_18780 PF00072 Response regulator receiver domain AL533_18785 PF09371 Tex-like protein N-terminal domain AL533_18785 PF17674 HHH domain AL533_18785 PF16921 Tex protein YqgF-like domain AL533_18785 PF00575 S1 RNA binding domain AL533_18795 PF01740 STAS domain AL533_18795 PF00916 Sulfate permease family AL533_18800 PF00106 short chain dehydrogenase AL533_18805 PF01053 Cys/Met metabolism PLP-dependent enzyme AL533_18810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL533_18810 PF00205 Thiamine pyrophosphate enzyme, central domain AL533_18810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL533_18815 PF00005 ABC transporter AL533_18815 PF12848 ABC transporter AL533_18840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL533_18840 PF00529 HlyD membrane-fusion protein of T1SS AL533_18845 PF00873 AcrB/AcrD/AcrF family AL533_18850 PF01545 Cation efflux family AL533_18880 PF00324 Amino acid permease AL533_18895 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL533_18910 PF01795 MraW methylase family AL533_18920 PF00905 Penicillin binding protein transpeptidase domain AL533_18920 PF03717 Penicillin-binding Protein dimerisation domain AL533_18925 PF01225 Mur ligase family, catalytic domain AL533_18925 PF08245 Mur ligase middle domain AL533_18925 PF02875 Mur ligase family, glutamate ligase domain AL533_18930 PF01225 Mur ligase family, catalytic domain AL533_18930 PF08245 Mur ligase middle domain AL533_18930 PF02875 Mur ligase family, glutamate ligase domain AL533_18935 PF00953 Glycosyl transferase family 4 AL533_18945 PF13847 Methyltransferase domain AL533_18950 PF00912 Transglycosylase AL533_18950 PF17092 Penicillin-binding protein OB-like domain AL533_18950 PF00905 Penicillin binding protein transpeptidase domain AL533_18975 PF00263 Bacterial type II and III secretion system protein AL533_18975 PF03958 Bacterial type II/III secretion system short domain AL533_18975 PF07660 Secretin and TonB N terminus short domain AL533_18975 PF11741 AMIN domain AL533_18980 PF01202 Shikimate kinase AL533_18985 PF01761 3-dehydroquinate synthase AL533_18995 PF01645 Conserved region in glutamate synthase AL533_18995 PF04898 Glutamate synthase central domain AL533_18995 PF00310 Glutamine amidotransferases class-II AL533_18995 PF01493 GXGXG motif AL533_19000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL533_19000 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL533_19010 PF04011 LemA family AL533_19015 PF04536 TPM domain AL533_19025 PF07963 Prokaryotic N-terminal methylation motif AL533_19025 PF00114 Pilin (bacterial filament) AL533_19035 PF04932 O-Antigen ligase AL533_19035 PF15864 Protein glycosylation ligase AL533_19035 PF11846 Virulence factor membrane-bound polymerase, C-terminal AL533_19040 PF00210 Ferritin-like domain AL533_19045 PF04324 BFD-like [2Fe-2S] binding domain AL533_19050 PF01042 Endoribonuclease L-PSP AL533_19055 PF02824 TGS domain AL533_19055 PF04607 Region found in RelA / SpoT proteins AL533_19055 PF13291 ACT domain AL533_19065 PF01192 RNA polymerase Rpb6 AL533_19070 PF00625 Guanylate kinase AL533_19075 PF02401 LytB protein AL533_19110 PF07963 Prokaryotic N-terminal methylation motif AL533_19110 PF00114 Pilin (bacterial filament) AL533_19115 PF00886 Ribosomal protein S16 AL533_19120 PF01782 RimM N-terminal domain AL533_19120 PF05239 PRC-barrel domain AL533_19125 PF01746 tRNA (Guanine-1)-methyltransferase AL533_19130 PF01245 Ribosomal protein L19 AL533_19135 PF00561 alpha/beta hydrolase fold AL533_19140 PF03280 Proteobacterial lipase chaperone protein AL533_19145 PF01509 TruB family pseudouridylate synthase (N terminal domain) AL533_19145 PF09157 Pseudouridine synthase II TruB, C-terminal AL533_19145 PF16198 tRNA pseudouridylate synthase B C-terminal domain AL533_19150 PF01925 Sulfite exporter TauE/SafE AL533_19160 PF00892 EamA-like transporter family AL533_19165 PF00892 EamA-like transporter family AL533_19170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL533_19170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL533_19175 PF02913 FAD linked oxidases, C-terminal domain AL533_19175 PF01565 FAD binding domain AL533_19190 PF03992 Antibiotic biosynthesis monooxygenase AL533_19195 PF02525 Flavodoxin-like fold