locus-tag class description FDQ49_00015 PF03466 LysR substrate binding domain FDQ49_00015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_00020 PF01370 NAD dependent epimerase/dehydratase family FDQ49_00025 PF07690 Major Facilitator Superfamily FDQ49_00030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDQ49_00030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDQ49_00045 PF00005 ABC transporter FDQ49_00065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FDQ49_00065 PF14572 Phosphoribosyl synthetase-associated domain FDQ49_00070 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FDQ49_00085 PF05154 TM2 domain FDQ49_00105 PF00196 Bacterial regulatory proteins, luxR family FDQ49_00110 PF01425 Amidase FDQ49_00115 PF13533 Biotin-lipoyl like FDQ49_00120 PF07690 Major Facilitator Superfamily FDQ49_00145 PF01975 Survival protein SurE FDQ49_00155 PF04607 Region found in RelA / SpoT proteins FDQ49_00155 PF13291 ACT domain FDQ49_00155 PF02824 TGS domain FDQ49_00220 PF13673 Acetyltransferase (GNAT) domain FDQ49_00225 PF12146 Serine aminopeptidase, S33 FDQ49_00230 PF03466 LysR substrate binding domain FDQ49_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_00250 PF07681 DoxX FDQ49_00255 PF03466 LysR substrate binding domain FDQ49_00255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_00260 PF16527 Two-component sensor protein CpxA, periplasmic domain FDQ49_00260 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_00260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_00260 PF00672 HAMP domain FDQ49_00265 PF00486 Transcriptional regulatory protein, C terminal FDQ49_00265 PF00072 Response regulator receiver domain FDQ49_00270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDQ49_00270 PF00529 HlyD membrane-fusion protein of T1SS FDQ49_00275 PF00873 AcrB/AcrD/AcrF family FDQ49_00280 PF02321 Outer membrane efflux protein FDQ49_00290 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FDQ49_00295 PF00027 Cyclic nucleotide-binding domain FDQ49_00295 PF13545 Crp-like helix-turn-helix domain FDQ49_00300 PF00884 Sulfatase FDQ49_00305 PF00593 TonB dependent receptor FDQ49_00305 PF07715 TonB-dependent Receptor Plug Domain FDQ49_00310 PF00248 Aldo/keto reductase family FDQ49_00320 PF00593 TonB dependent receptor FDQ49_00320 PF07715 TonB-dependent Receptor Plug Domain FDQ49_00330 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FDQ49_00340 PF02472 Biopolymer transport protein ExbD/TolR FDQ49_00345 PF01618 MotA/TolQ/ExbB proton channel family FDQ49_00350 PF03544 Gram-negative bacterial TonB protein C-terminal FDQ49_00355 PF00005 ABC transporter FDQ49_00360 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_00365 PF00296 Luciferase-like monooxygenase FDQ49_00370 PF07715 TonB-dependent Receptor Plug Domain FDQ49_00370 PF00593 TonB dependent receptor FDQ49_00380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDQ49_00385 PF02472 Biopolymer transport protein ExbD/TolR FDQ49_00390 PF01618 MotA/TolQ/ExbB proton channel family FDQ49_00395 PF03544 Gram-negative bacterial TonB protein C-terminal FDQ49_00400 PF00296 Luciferase-like monooxygenase FDQ49_00405 PF09084 NMT1/THI5 like FDQ49_00410 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_00415 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_00420 PF00005 ABC transporter FDQ49_00425 PF02416 mttA/Hcf106 family FDQ49_00430 PF02416 mttA/Hcf106 family FDQ49_00435 PF00902 Sec-independent protein translocase protein (TatC) FDQ49_00440 PF00158 Sigma-54 interaction domain FDQ49_00445 PF00296 Luciferase-like monooxygenase FDQ49_00455 PF07715 TonB-dependent Receptor Plug Domain FDQ49_00455 PF00593 TonB dependent receptor FDQ49_00465 PF00005 ABC transporter FDQ49_00465 PF00664 ABC transporter transmembrane region FDQ49_00470 PF00005 ABC transporter FDQ49_00470 PF00664 ABC transporter transmembrane region FDQ49_00480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_00480 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_00480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_00485 PF00005 ABC transporter FDQ49_00485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDQ49_00490 PF12911 N-terminal TM domain of oligopeptide transport permease C FDQ49_00490 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_00495 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_00500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDQ49_00505 PF00296 Luciferase-like monooxygenase FDQ49_00525 PF16970 Type-1 fimbrial protein, A FDQ49_00530 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FDQ49_00530 PF02753 Pili assembly chaperone PapD, C-terminal domain FDQ49_00535 PF00577 Outer membrane usher protein FDQ49_00535 PF13954 PapC N-terminal domain FDQ49_00535 PF13953 PapC C-terminal domain FDQ49_00540 PF00419 Fimbrial protein FDQ49_00550 PF00107 Zinc-binding dehydrogenase FDQ49_00550 PF08240 Alcohol dehydrogenase GroES-like domain FDQ49_00560 PF00199 Catalase FDQ49_00575 PF13091 PLD-like domain FDQ49_00595 PF01244 Membrane dipeptidase (Peptidase family M19) FDQ49_00600 PF13186 Iron-sulfur cluster-binding domain FDQ49_00600 PF04055 Radical SAM superfamily FDQ49_00605 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FDQ49_00610 PF03070 TENA/THI-4/PQQC family FDQ49_00615 PF12706 Beta-lactamase superfamily domain FDQ49_00620 PF08042 PqqA family FDQ49_00625 PF13089 Polyphosphate kinase N-terminal domain FDQ49_00625 PF17941 Polyphosphate kinase C-terminal domain 1 FDQ49_00625 PF02503 Polyphosphate kinase middle domain FDQ49_00625 PF13090 Polyphosphate kinase C-terminal domain 2 FDQ49_00630 PF00149 Calcineurin-like phosphoesterase FDQ49_00640 PF00593 TonB dependent receptor FDQ49_00640 PF07715 TonB-dependent Receptor Plug Domain FDQ49_00645 PF00873 AcrB/AcrD/AcrF family FDQ49_00650 PF00550 Phosphopantetheine attachment site FDQ49_00650 PF00857 Isochorismatase family FDQ49_00655 PF00501 AMP-binding enzyme FDQ49_00655 PF13193 AMP-binding enzyme C-terminal domain FDQ49_00660 PF00425 chorismate binding enzyme FDQ49_00665 PF00106 short chain dehydrogenase FDQ49_00675 PF03621 MbtH-like protein FDQ49_00680 PF13193 AMP-binding enzyme C-terminal domain FDQ49_00680 PF00501 AMP-binding enzyme FDQ49_00680 PF00975 Thioesterase domain FDQ49_00680 PF00550 Phosphopantetheine attachment site FDQ49_00680 PF00668 Condensation domain FDQ49_00685 PF05977 Transmembrane secretion effector FDQ49_00690 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FDQ49_00690 PF01648 4'-phosphopantetheinyl transferase superfamily FDQ49_00710 PF03459 TOBE domain FDQ49_00710 PF00005 ABC transporter FDQ49_00715 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_00725 PF03459 TOBE domain FDQ49_00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_00730 PF00355 Rieske [2Fe-2S] domain FDQ49_00730 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDQ49_00735 PF00866 Ring hydroxylating beta subunit FDQ49_00740 PF00970 Oxidoreductase FAD-binding domain FDQ49_00740 PF00111 2Fe-2S iron-sulfur cluster binding domain FDQ49_00740 PF00175 Oxidoreductase NAD-binding domain FDQ49_00745 PF12833 Helix-turn-helix domain FDQ49_00745 PF14525 AraC-binding-like domain FDQ49_00755 PF01613 Flavin reductase like domain FDQ49_00770 PF01738 Dienelactone hydrolase family FDQ49_00775 PF07690 Major Facilitator Superfamily FDQ49_00780 PF06719 AraC-type transcriptional regulator N-terminus FDQ49_00780 PF12833 Helix-turn-helix domain FDQ49_00795 PF00753 Metallo-beta-lactamase superfamily FDQ49_00820 PF07690 Major Facilitator Superfamily FDQ49_00825 PF03466 LysR substrate binding domain FDQ49_00825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_00840 PF03466 LysR substrate binding domain FDQ49_00840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_00845 PF01144 Coenzyme A transferase FDQ49_00850 PF01144 Coenzyme A transferase FDQ49_00855 PF02667 Short chain fatty acid transporter FDQ49_00860 PF00108 Thiolase, N-terminal domain FDQ49_00860 PF02803 Thiolase, C-terminal domain FDQ49_00865 PF03466 LysR substrate binding domain FDQ49_00865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_00870 PF03466 LysR substrate binding domain FDQ49_00870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_00885 PF00206 Lyase FDQ49_00885 PF10415 Fumarase C C-terminus FDQ49_00890 PF00593 TonB dependent receptor FDQ49_00890 PF07715 TonB-dependent Receptor Plug Domain FDQ49_00895 PF00083 Sugar (and other) transporter FDQ49_00910 PF00005 ABC transporter FDQ49_00915 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_00920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDQ49_00940 PF02417 Chromate transporter FDQ49_00945 PF12833 Helix-turn-helix domain FDQ49_00945 PF06445 GyrI-like small molecule binding domain FDQ49_00960 PF01925 Sulfite exporter TauE/SafE FDQ49_00965 PF04273 Putative phosphatase (DUF442) FDQ49_00965 PF00753 Metallo-beta-lactamase superfamily FDQ49_00970 PF04273 Putative phosphatase (DUF442) FDQ49_00970 PF00753 Metallo-beta-lactamase superfamily FDQ49_00975 PF02954 Bacterial regulatory protein, Fis family FDQ49_00975 PF00072 Response regulator receiver domain FDQ49_00975 PF00158 Sigma-54 interaction domain FDQ49_00980 PF01062 Bestrophin, RFP-TM, chloride channel FDQ49_00985 PF00107 Zinc-binding dehydrogenase FDQ49_00985 PF08240 Alcohol dehydrogenase GroES-like domain FDQ49_00990 PF00106 short chain dehydrogenase FDQ49_00995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDQ49_00995 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_01000 PF00364 Biotin-requiring enzyme FDQ49_01000 PF02817 e3 binding domain FDQ49_01000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDQ49_01005 PF02779 Transketolase, pyrimidine binding domain FDQ49_01005 PF02780 Transketolase, C-terminal domain FDQ49_01010 PF00676 Dehydrogenase E1 component FDQ49_01015 PF04055 Radical SAM superfamily FDQ49_01030 PF08448 PAS fold FDQ49_01030 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_01035 PF01264 Chorismate synthase FDQ49_01040 PF05175 Methyltransferase small domain FDQ49_01045 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_01055 PF00004 ATPase family associated with various cellular activities (AAA) FDQ49_01055 PF17862 AAA+ lid domain FDQ49_01055 PF01434 Peptidase family M41 FDQ49_01065 PF05166 YcgL domain FDQ49_01085 PF00570 HRDC domain FDQ49_01085 PF01612 3'-5' exonuclease FDQ49_01090 PF13662 Toprim domain FDQ49_01090 PF02132 RecR protein FDQ49_01095 PF02575 YbaB/EbfC DNA-binding family FDQ49_01105 PF01053 Cys/Met metabolism PLP-dependent enzyme FDQ49_01115 PF08241 Methyltransferase domain FDQ49_01145 PF01230 HIT domain FDQ49_01180 PF00005 ABC transporter FDQ49_01185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDQ49_01195 PF02684 Lipid-A-disaccharide synthetase FDQ49_01200 PF07715 TonB-dependent Receptor Plug Domain FDQ49_01200 PF00593 TonB dependent receptor FDQ49_01220 PF01925 Sulfite exporter TauE/SafE FDQ49_01225 PF00793 DAHP synthetase I family FDQ49_01235 PF00593 TonB dependent receptor FDQ49_01235 PF07715 TonB-dependent Receptor Plug Domain FDQ49_01240 PF02654 Cobalamin-5-phosphate synthase FDQ49_01250 PF00300 Histidine phosphatase superfamily (branch 1) FDQ49_01255 PF02277 Phosphoribosyltransferase FDQ49_01260 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FDQ49_01280 PF04073 Aminoacyl-tRNA editing domain FDQ49_01290 PF03109 ABC1 family FDQ49_01295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_01295 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_01295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_01300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_01300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_01300 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_01305 PF00487 Fatty acid desaturase FDQ49_01310 PF12852 Cupin FDQ49_01310 PF12833 Helix-turn-helix domain FDQ49_01315 PF09312 SurA N-terminal domain FDQ49_01315 PF00639 PPIC-type PPIASE domain FDQ49_01320 PF00216 Bacterial DNA-binding protein FDQ49_01335 PF02082 Transcriptional regulator FDQ49_01340 PF00266 Aminotransferase class-V FDQ49_01345 PF01592 NifU-like N terminal domain FDQ49_01350 PF01521 Iron-sulphur cluster biosynthesis FDQ49_01355 PF00226 DnaJ domain FDQ49_01355 PF07743 HSCB C-terminal oligomerisation domain FDQ49_01360 PF00012 Hsp70 protein FDQ49_01365 PF00111 2Fe-2S iron-sulfur cluster binding domain FDQ49_01370 PF00211 Adenylate and Guanylate cyclase catalytic domain FDQ49_01380 PF17757 UvrB interaction domain FDQ49_01380 PF02559 CarD-like/TRCF domain FDQ49_01380 PF00271 Helicase conserved C-terminal domain FDQ49_01380 PF00270 DEAD/DEAH box helicase FDQ49_01380 PF03461 TRCF domain FDQ49_01400 PF03737 Aldolase/RraA FDQ49_01405 PF13460 NAD(P)H-binding FDQ49_01410 PF01649 Ribosomal protein S20 FDQ49_01420 PF00459 Inositol monophosphatase family FDQ49_01435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDQ49_01435 PF00005 ABC transporter FDQ49_01440 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_01445 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_01450 PF01432 Peptidase family M3 FDQ49_01470 PF00593 TonB dependent receptor FDQ49_01470 PF07715 TonB-dependent Receptor Plug Domain FDQ49_01475 PF03544 Gram-negative bacterial TonB protein C-terminal FDQ49_01480 PF01618 MotA/TolQ/ExbB proton channel family FDQ49_01485 PF02472 Biopolymer transport protein ExbD/TolR FDQ49_01490 PF02472 Biopolymer transport protein ExbD/TolR FDQ49_01500 PF01274 Malate synthase FDQ49_01505 PF03969 AFG1-like ATPase FDQ49_01515 PF00743 Flavin-binding monooxygenase-like FDQ49_01520 PF03956 Lysine exporter LysO FDQ49_01525 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FDQ49_01535 PF00216 Bacterial DNA-binding protein FDQ49_01540 PF00575 S1 RNA binding domain FDQ49_01545 PF02224 Cytidylate kinase FDQ49_01555 PF14437 MafB19-like deaminase FDQ49_01565 PF03167 Uracil DNA glycosylase superfamily FDQ49_01575 PF03934 Type II secretion system (T2SS), protein K FDQ49_01580 PF07963 Prokaryotic N-terminal methylation motif FDQ49_01580 PF11612 Type II secretion system (T2SS), protein J FDQ49_01585 PF02501 Type II secretion system (T2SS), protein I FDQ49_01585 PF07963 Prokaryotic N-terminal methylation motif FDQ49_01600 PF01026 TatD related DNase FDQ49_01610 PF09115 DNA polymerase III, delta subunit, C terminal FDQ49_01615 PF02348 Cytidylyltransferase FDQ49_01620 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FDQ49_01625 PF00664 ABC transporter transmembrane region FDQ49_01625 PF00005 ABC transporter FDQ49_01635 PF01618 MotA/TolQ/ExbB proton channel family FDQ49_01640 PF02195 ParB-like nuclease domain FDQ49_01640 PF17762 HTH domain found in ParB protein FDQ49_01645 PF13614 AAA domain FDQ49_01650 PF02527 rRNA small subunit methyltransferase G FDQ49_01655 PF00483 Nucleotidyl transferase FDQ49_01660 PF01636 Phosphotransferase enzyme family FDQ49_01665 PF03968 OstA-like protein FDQ49_01665 PF04453 LPS transport system D FDQ49_01670 PF09312 SurA N-terminal domain FDQ49_01670 PF00639 PPIC-type PPIASE domain FDQ49_01675 PF01116 Fructose-bisphosphate aldolase class-II FDQ49_01685 PF00162 Phosphoglycerate kinase FDQ49_01695 PF02545 Maf-like protein FDQ49_01700 PF08007 Cupin superfamily protein FDQ49_01715 PF00375 Sodium:dicarboxylate symporter family FDQ49_01720 PF06912 Protein of unknown function (DUF1275) FDQ49_01725 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FDQ49_01730 PF00664 ABC transporter transmembrane region FDQ49_01730 PF00005 ABC transporter FDQ49_01740 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDQ49_01740 PF12833 Helix-turn-helix domain FDQ49_01745 PF01597 Glycine cleavage H-protein FDQ49_01750 PF02146 Sir2 family FDQ49_01755 PF00474 Sodium:solute symporter family FDQ49_01760 PF01037 Lrp/AsnC ligand binding domain FDQ49_01765 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FDQ49_01765 PF14850 DNA-binding domain of Proline dehydrogenase FDQ49_01765 PF01619 Proline dehydrogenase FDQ49_01765 PF00171 Aldehyde dehydrogenase family FDQ49_01770 PF04229 GrpB protein FDQ49_01775 PF05958 tRNA (Uracil-5-)-methyltransferase FDQ49_01785 PF09992 Phosphodiester glycosidase FDQ49_01795 PF04264 YceI-like domain FDQ49_01815 PF02779 Transketolase, pyrimidine binding domain FDQ49_01815 PF02780 Transketolase, C-terminal domain FDQ49_01815 PF00456 Transketolase, thiamine diphosphate binding domain FDQ49_01820 PF02772 S-adenosylmethionine synthetase, central domain FDQ49_01820 PF02773 S-adenosylmethionine synthetase, C-terminal domain FDQ49_01820 PF00438 S-adenosylmethionine synthetase, N-terminal domain FDQ49_01850 PF02075 Crossover junction endodeoxyribonuclease RuvC FDQ49_01855 PF01256 Carbohydrate kinase FDQ49_01855 PF03853 YjeF-related protein N-terminus FDQ49_01860 PF08331 Domain of unknown function (DUF1730) FDQ49_01865 PF06968 Biotin and Thiamin Synthesis associated domain FDQ49_01865 PF04055 Radical SAM superfamily FDQ49_01880 PF16970 Type-1 fimbrial protein, A FDQ49_01885 PF02753 Pili assembly chaperone PapD, C-terminal domain FDQ49_01885 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FDQ49_01890 PF13954 PapC N-terminal domain FDQ49_01890 PF13953 PapC C-terminal domain FDQ49_01890 PF00577 Outer membrane usher protein FDQ49_01910 PF12833 Helix-turn-helix domain FDQ49_01910 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDQ49_01925 PF00892 EamA-like transporter family FDQ49_01935 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FDQ49_01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_01945 PF03466 LysR substrate binding domain FDQ49_01965 PF00440 Bacterial regulatory proteins, tetR family FDQ49_01975 PF01709 Transcriptional regulator FDQ49_01980 PF01037 Lrp/AsnC ligand binding domain FDQ49_01990 PF00005 ABC transporter FDQ49_01995 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_02000 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_02015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_02015 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_02025 PF00296 Luciferase-like monooxygenase FDQ49_02030 PF03180 NLPA lipoprotein FDQ49_02035 PF03180 NLPA lipoprotein FDQ49_02040 PF00005 ABC transporter FDQ49_02040 PF09383 NIL domain FDQ49_02045 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_02050 PF06071 Protein of unknown function (DUF933) FDQ49_02050 PF01926 50S ribosome-binding GTPase FDQ49_02075 PF03591 AzlC protein FDQ49_02080 PF05437 Branched-chain amino acid transport protein (AzlD) FDQ49_02090 PF02222 ATP-grasp domain FDQ49_02095 PF08335 GlnD PII-uridylyltransferase FDQ49_02095 PF01909 Nucleotidyltransferase domain FDQ49_02095 PF01966 HD domain FDQ49_02100 PF00155 Aminotransferase class I and II FDQ49_02105 PF01810 LysE type translocator FDQ49_02110 PF12852 Cupin FDQ49_02110 PF12833 Helix-turn-helix domain FDQ49_02115 PF00255 Glutathione peroxidase FDQ49_02120 PF01641 SelR domain FDQ49_02125 PF00155 Aminotransferase class I and II FDQ49_02130 PF00375 Sodium:dicarboxylate symporter family FDQ49_02135 PF00710 Asparaginase, N-terminal FDQ49_02135 PF17763 Glutaminase/Asparaginase C-terminal domain FDQ49_02140 PF02811 PHP domain FDQ49_02140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDQ49_02140 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDQ49_02140 PF01336 OB-fold nucleic acid binding domain FDQ49_02140 PF14579 Helix-hairpin-helix motif FDQ49_02145 PF00588 SpoU rRNA Methylase family FDQ49_02150 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_02165 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_02165 PF13192 Thioredoxin domain FDQ49_02180 PF03466 LysR substrate binding domain FDQ49_02180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_02185 PF01758 Sodium Bile acid symporter family FDQ49_02190 PF01022 Bacterial regulatory protein, arsR family FDQ49_02195 PF03960 ArsC family FDQ49_02205 PF01979 Amidohydrolase family FDQ49_02205 PF13382 Adenine deaminase C-terminal domain FDQ49_02215 PF03466 LysR substrate binding domain FDQ49_02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_02225 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FDQ49_02230 PF01177 Asp/Glu/Hydantoin racemase FDQ49_02235 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FDQ49_02240 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_02245 PF00005 ABC transporter FDQ49_02250 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDQ49_02260 PF00083 Sugar (and other) transporter FDQ49_02265 PF00296 Luciferase-like monooxygenase FDQ49_02270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_02270 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_02270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_02285 PF01654 Cytochrome bd terminal oxidase subunit I FDQ49_02290 PF02322 Cytochrome bd terminal oxidase subunit II FDQ49_02300 PF00155 Aminotransferase class I and II FDQ49_02300 PF00392 Bacterial regulatory proteins, gntR family FDQ49_02305 PF07690 Major Facilitator Superfamily FDQ49_02310 PF00106 short chain dehydrogenase FDQ49_02330 PF00155 Aminotransferase class I and II FDQ49_02330 PF00392 Bacterial regulatory proteins, gntR family FDQ49_02335 PF04172 LrgB-like family FDQ49_02340 PF03788 LrgA family FDQ49_02345 PF03466 LysR substrate binding domain FDQ49_02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_02350 PF14834 Glutathione S-transferase, C-terminal domain FDQ49_02350 PF02798 Glutathione S-transferase, N-terminal domain FDQ49_02355 PF02798 Glutathione S-transferase, N-terminal domain FDQ49_02360 PF03466 LysR substrate binding domain FDQ49_02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_02370 PF00581 Rhodanese-like domain FDQ49_02375 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_02385 PF00266 Aminotransferase class-V FDQ49_02390 PF01810 LysE type translocator FDQ49_02395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_02395 PF03466 LysR substrate binding domain FDQ49_02405 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDQ49_02410 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDQ49_02415 PF00005 ABC transporter FDQ49_02420 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_02425 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_02440 PF07690 Major Facilitator Superfamily FDQ49_02445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_02445 PF03466 LysR substrate binding domain FDQ49_02455 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FDQ49_02460 PF00072 Response regulator receiver domain FDQ49_02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_02465 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_02465 PF00072 Response regulator receiver domain FDQ49_02465 PF09308 LuxQ, periplasmic FDQ49_02475 PF13404 AsnC-type helix-turn-helix domain FDQ49_02475 PF01037 Lrp/AsnC ligand binding domain FDQ49_02485 PF00717 Peptidase S24-like FDQ49_02515 PF00199 Catalase FDQ49_02515 PF06628 Catalase-related immune-responsive FDQ49_02515 PF18011 C-terminal domain found in long catalases FDQ49_02525 PF18146 Damage-inducible protein CinA KH domain FDQ49_02525 PF02464 Competence-damaged protein FDQ49_02525 PF00994 Probable molybdopterin binding domain FDQ49_02560 PF03466 LysR substrate binding domain FDQ49_02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_02580 PF13193 AMP-binding enzyme C-terminal domain FDQ49_02580 PF00501 AMP-binding enzyme FDQ49_02585 PF00440 Bacterial regulatory proteins, tetR family FDQ49_02590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_02590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_02590 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_02595 PF01039 Carboxyl transferase domain FDQ49_02600 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_02605 PF00289 Biotin carboxylase, N-terminal domain FDQ49_02605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDQ49_02605 PF00364 Biotin-requiring enzyme FDQ49_02605 PF02785 Biotin carboxylase C-terminal domain FDQ49_02610 PF00682 HMGL-like FDQ49_02615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_02615 PF03466 LysR substrate binding domain FDQ49_02630 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDQ49_02630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_02630 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_02630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_02640 PF07690 Major Facilitator Superfamily FDQ49_02650 PF01144 Coenzyme A transferase FDQ49_02655 PF01144 Coenzyme A transferase FDQ49_02660 PF07690 Major Facilitator Superfamily FDQ49_02665 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_02665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_02665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_02670 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_02680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDQ49_02680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDQ49_02680 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FDQ49_02685 PF02803 Thiolase, C-terminal domain FDQ49_02685 PF00108 Thiolase, N-terminal domain FDQ49_02690 PF09339 IclR helix-turn-helix domain FDQ49_02695 PF07690 Major Facilitator Superfamily FDQ49_02705 PF03060 Nitronate monooxygenase FDQ49_02710 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_02715 PF09339 IclR helix-turn-helix domain FDQ49_02720 PF02515 CoA-transferase family III FDQ49_02725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_02725 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_02725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_02730 PF07690 Major Facilitator Superfamily FDQ49_02735 PF13419 Haloacid dehalogenase-like hydrolase FDQ49_02740 PF00266 Aminotransferase class-V FDQ49_02745 PF01266 FAD dependent oxidoreductase FDQ49_02750 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_02755 PF00005 ABC transporter FDQ49_02755 PF08402 TOBE domain FDQ49_02765 PF00392 Bacterial regulatory proteins, gntR family FDQ49_02765 PF07702 UTRA domain FDQ49_02770 PF01494 FAD binding domain FDQ49_02775 PF01614 Bacterial transcriptional regulator FDQ49_02775 PF09339 IclR helix-turn-helix domain FDQ49_02780 PF02525 Flavodoxin-like fold FDQ49_02785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_02785 PF03466 LysR substrate binding domain FDQ49_02800 PF12146 Serine aminopeptidase, S33 FDQ49_02805 PF12146 Serine aminopeptidase, S33 FDQ49_02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_02810 PF03466 LysR substrate binding domain FDQ49_02815 PF00440 Bacterial regulatory proteins, tetR family FDQ49_02815 PF16295 Tetracyclin repressor-like, C-terminal domain FDQ49_02835 PF03061 Thioesterase superfamily FDQ49_02840 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_02845 PF07848 PaaX-like protein FDQ49_02845 PF08223 PaaX-like protein C-terminal domain FDQ49_02850 PF14535 AMP-binding enzyme C-terminal domain FDQ49_02850 PF00501 AMP-binding enzyme FDQ49_02855 PF02803 Thiolase, C-terminal domain FDQ49_02855 PF00108 Thiolase, N-terminal domain FDQ49_02860 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FDQ49_02860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDQ49_02860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDQ49_02865 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_02870 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_02875 PF00970 Oxidoreductase FAD-binding domain FDQ49_02875 PF00111 2Fe-2S iron-sulfur cluster binding domain FDQ49_02875 PF00175 Oxidoreductase NAD-binding domain FDQ49_02880 PF01883 Iron-sulfur cluster assembly protein FDQ49_02885 PF05138 Phenylacetic acid catabolic protein FDQ49_02890 PF06243 Phenylacetic acid degradation B FDQ49_02895 PF05138 Phenylacetic acid catabolic protein FDQ49_02900 PF01575 MaoC like domain FDQ49_02900 PF00171 Aldehyde dehydrogenase family FDQ49_02905 PF03313 Serine dehydratase alpha chain FDQ49_02905 PF03315 Serine dehydratase beta chain FDQ49_02910 PF13520 Amino acid permease FDQ49_02915 PF00171 Aldehyde dehydrogenase family FDQ49_02920 PF00083 Sugar (and other) transporter FDQ49_02930 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_02930 PF04324 BFD-like [2Fe-2S] binding domain FDQ49_02940 PF01266 FAD dependent oxidoreductase FDQ49_02940 PF01266 FAD dependent oxidoreductase FDQ49_02945 PF05544 Proline racemase FDQ49_02950 PF00392 Bacterial regulatory proteins, gntR family FDQ49_02960 PF00701 Dihydrodipicolinate synthetase family FDQ49_02975 PF09278 MerR, DNA binding FDQ49_02975 PF00376 MerR family regulatory protein FDQ49_02985 PF02677 Epoxyqueuosine reductase QueH FDQ49_03000 PF07690 Major Facilitator Superfamily FDQ49_03005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDQ49_03010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_03010 PF03466 LysR substrate binding domain FDQ49_03040 PF00004 ATPase family associated with various cellular activities (AAA) FDQ49_03040 PF07724 AAA domain (Cdc48 subfamily) FDQ49_03040 PF17871 AAA lid domain FDQ49_03040 PF10431 C-terminal, D2-small domain, of ClpB protein FDQ49_03050 PF18393 MotY N-terminal domain FDQ49_03050 PF00691 OmpA family FDQ49_03105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_03105 PF03466 LysR substrate binding domain FDQ49_03110 PF07690 Major Facilitator Superfamily FDQ49_03125 PF00005 ABC transporter FDQ49_03135 PF01425 Amidase FDQ49_03140 PF08753 NikR C terminal nickel binding domain FDQ49_03140 PF01402 Ribbon-helix-helix protein, copG family FDQ49_03155 PF01638 HxlR-like helix-turn-helix FDQ49_03160 PF02525 Flavodoxin-like fold FDQ49_03165 PF02785 Biotin carboxylase C-terminal domain FDQ49_03165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDQ49_03165 PF00289 Biotin carboxylase, N-terminal domain FDQ49_03180 PF00107 Zinc-binding dehydrogenase FDQ49_03180 PF08240 Alcohol dehydrogenase GroES-like domain FDQ49_03180 PF13823 Alcohol dehydrogenase GroES-associated FDQ49_03190 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDQ49_03190 PF12833 Helix-turn-helix domain FDQ49_03215 PF00654 Voltage gated chloride channel FDQ49_03220 PF02785 Biotin carboxylase C-terminal domain FDQ49_03220 PF00289 Biotin carboxylase, N-terminal domain FDQ49_03220 PF00364 Biotin-requiring enzyme FDQ49_03220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDQ49_03230 PF07286 Protein of unknown function (DUF1445) FDQ49_03235 PF03746 LamB/YcsF family FDQ49_03240 PF01566 Natural resistance-associated macrophage protein FDQ49_03245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_03245 PF03466 LysR substrate binding domain FDQ49_03255 PF08281 Sigma-70, region 4 FDQ49_03255 PF04542 Sigma-70 region 2 FDQ49_03265 PF05114 Protein of unknown function (DUF692) FDQ49_03280 PF00106 short chain dehydrogenase FDQ49_03295 PF00892 EamA-like transporter family FDQ49_03310 PF06629 MltA-interacting protein MipA FDQ49_03315 PF00202 Aminotransferase class-III FDQ49_03400 PF04717 Type VI secretion system, phage-baseplate injector FDQ49_03400 PF16671 Actin cross-linking domain FDQ49_03435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDQ49_03435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDQ49_03450 PF07739 TipAS antibiotic-recognition domain FDQ49_03450 PF13411 MerR HTH family regulatory protein FDQ49_03455 PF00313 'Cold-shock' DNA-binding domain FDQ49_03460 PF00117 Glutamine amidotransferase class-I FDQ49_03465 PF01053 Cys/Met metabolism PLP-dependent enzyme FDQ49_03475 PF01037 Lrp/AsnC ligand binding domain FDQ49_03475 PF13404 AsnC-type helix-turn-helix domain FDQ49_03480 PF06865 Pyrimidine/purine nucleoside phosphorylase FDQ49_03495 PF13302 Acetyltransferase (GNAT) domain FDQ49_03500 PF07715 TonB-dependent Receptor Plug Domain FDQ49_03525 PF07690 Major Facilitator Superfamily FDQ49_03535 PF00892 EamA-like transporter family FDQ49_03540 PF01037 Lrp/AsnC ligand binding domain FDQ49_03555 PF03707 Bacterial signalling protein N terminal repeat FDQ49_03555 PF00563 EAL domain FDQ49_03555 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_03570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_03570 PF03466 LysR substrate binding domain FDQ49_03575 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDQ49_03575 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_03575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_03575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_03580 PF01575 MaoC like domain FDQ49_03585 PF00106 short chain dehydrogenase FDQ49_03600 PF05188 MutS domain II FDQ49_03600 PF01624 MutS domain I FDQ49_03600 PF00488 MutS domain V FDQ49_03600 PF05192 MutS domain III FDQ49_03600 PF05190 MutS family domain IV FDQ49_03610 PF11953 Domain of unknown function (DUF3470) FDQ49_03610 PF00037 4Fe-4S binding domain FDQ49_03620 PF01596 O-methyltransferase FDQ49_03630 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_03635 PF01205 Uncharacterized protein family UPF0029 FDQ49_03640 PF13533 Biotin-lipoyl like FDQ49_03645 PF00664 ABC transporter transmembrane region FDQ49_03645 PF00005 ABC transporter FDQ49_03645 PF03412 Peptidase C39 family FDQ49_03650 PF02321 Outer membrane efflux protein FDQ49_03655 PF00005 ABC transporter FDQ49_03655 PF12399 Branched-chain amino acid ATP-binding cassette transporter FDQ49_03660 PF03968 OstA-like protein FDQ49_03675 PF01380 SIS domain FDQ49_03675 PF00571 CBS domain FDQ49_03680 PF01406 tRNA synthetases class I (C) catalytic domain FDQ49_03680 PF09190 DALR domain FDQ49_03740 PF14748 Pyrroline-5-carboxylate reductase dimerisation FDQ49_03740 PF03807 NADP oxidoreductase coenzyme F420-dependent FDQ49_03750 PF00313 'Cold-shock' DNA-binding domain FDQ49_03755 PF01810 LysE type translocator FDQ49_03785 PF13742 OB-fold nucleic acid binding domain FDQ49_03785 PF02601 Exonuclease VII, large subunit FDQ49_03820 PF09278 MerR, DNA binding FDQ49_03820 PF00376 MerR family regulatory protein FDQ49_03825 PF00403 Heavy-metal-associated domain FDQ49_03835 PF02830 V4R domain FDQ49_03835 PF06505 Activator of aromatic catabolism FDQ49_03835 PF02954 Bacterial regulatory protein, Fis family FDQ49_03835 PF00158 Sigma-54 interaction domain FDQ49_03845 PF06099 Phenol hydroxylase subunit FDQ49_03850 PF02332 Methane/Phenol/Toluene Hydroxylase FDQ49_03855 PF02406 MmoB/DmpM family FDQ49_03860 PF02332 Methane/Phenol/Toluene Hydroxylase FDQ49_03860 PF04945 YHS domain FDQ49_03870 PF00970 Oxidoreductase FAD-binding domain FDQ49_03870 PF00111 2Fe-2S iron-sulfur cluster binding domain FDQ49_03870 PF00175 Oxidoreductase NAD-binding domain FDQ49_03880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_03880 PF03466 LysR substrate binding domain FDQ49_03885 PF00355 Rieske [2Fe-2S] domain FDQ49_03885 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDQ49_03890 PF00866 Ring hydroxylating beta subunit FDQ49_03895 PF00970 Oxidoreductase FAD-binding domain FDQ49_03895 PF00111 2Fe-2S iron-sulfur cluster binding domain FDQ49_03895 PF00175 Oxidoreductase NAD-binding domain FDQ49_03900 PF00106 short chain dehydrogenase FDQ49_03905 PF03594 Benzoate membrane transport protein FDQ49_03910 PF07690 Major Facilitator Superfamily FDQ49_03920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FDQ49_03920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FDQ49_03925 PF11898 Domain of unknown function (DUF3418) FDQ49_03925 PF00271 Helicase conserved C-terminal domain FDQ49_03925 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FDQ49_03925 PF00270 DEAD/DEAH box helicase FDQ49_03925 PF04408 Helicase associated domain (HA2) FDQ49_03930 PF00578 AhpC/TSA family FDQ49_03930 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDQ49_03940 PF05175 Methyltransferase small domain FDQ49_03950 PF13192 Thioredoxin domain FDQ49_03950 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_03960 PF02798 Glutathione S-transferase, N-terminal domain FDQ49_03960 PF00043 Glutathione S-transferase, C-terminal domain FDQ49_03970 PF02390 Putative methyltransferase FDQ49_03980 PF13417 Glutathione S-transferase, N-terminal domain FDQ49_03980 PF00043 Glutathione S-transferase, C-terminal domain FDQ49_03990 PF13488 Glycine zipper FDQ49_03990 PF00691 OmpA family FDQ49_03995 PF01979 Amidohydrolase family FDQ49_04000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDQ49_04000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDQ49_04010 PF01170 Putative RNA methylase family UPF0020 FDQ49_04010 PF02926 THUMP domain FDQ49_04010 PF10672 S-adenosylmethionine-dependent methyltransferase FDQ49_04025 PF10431 C-terminal, D2-small domain, of ClpB protein FDQ49_04025 PF00004 ATPase family associated with various cellular activities (AAA) FDQ49_04025 PF02861 Clp amino terminal domain, pathogenicity island component FDQ49_04025 PF07724 AAA domain (Cdc48 subfamily) FDQ49_04025 PF17871 AAA lid domain FDQ49_04040 PF02566 OsmC-like protein FDQ49_04045 PF00027 Cyclic nucleotide-binding domain FDQ49_04045 PF13545 Crp-like helix-turn-helix domain FDQ49_04050 PF00248 Aldo/keto reductase family FDQ49_04065 PF00709 Adenylosuccinate synthetase FDQ49_04070 PF13393 Histidyl-tRNA synthetase FDQ49_04075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDQ49_04075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDQ49_04080 PF02272 DHHA1 domain FDQ49_04080 PF01411 tRNA synthetases class II (A) FDQ49_04080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDQ49_04085 PF13840 ACT domain FDQ49_04085 PF00696 Amino acid kinase family FDQ49_04085 PF01842 ACT domain FDQ49_04090 PF02599 Global regulator protein family FDQ49_04095 PF01351 Ribonuclease HII FDQ49_04105 PF01292 Prokaryotic cytochrome b561 FDQ49_04110 PF00962 Adenosine/AMP deaminase FDQ49_04115 PF00860 Permease family FDQ49_04125 PF00743 Flavin-binding monooxygenase-like FDQ49_04130 PF00106 short chain dehydrogenase FDQ49_04140 PF02678 Pirin FDQ49_04140 PF17954 Quercetinase C-terminal cupin domain FDQ49_04145 PF17932 Tetracyclin repressor-like, C-terminal domain FDQ49_04145 PF00440 Bacterial regulatory proteins, tetR family FDQ49_04155 PF00106 short chain dehydrogenase FDQ49_04160 PF00743 Flavin-binding monooxygenase-like FDQ49_04165 PF04072 Leucine carboxyl methyltransferase FDQ49_04170 PF12833 Helix-turn-helix domain FDQ49_04170 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDQ49_04175 PF00743 Flavin-binding monooxygenase-like FDQ49_04180 PF00106 short chain dehydrogenase FDQ49_04185 PF07859 alpha/beta hydrolase fold FDQ49_04190 PF05199 GMC oxidoreductase FDQ49_04195 PF18381 YcaO cyclodehydratase C-terminal domain FDQ49_04195 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FDQ49_04200 PF03573 outer membrane porin, OprD family FDQ49_04205 PF07690 Major Facilitator Superfamily FDQ49_04210 PF00884 Sulfatase FDQ49_04215 PF03781 Sulfatase-modifying factor enzyme 1 FDQ49_04225 PF00355 Rieske [2Fe-2S] domain FDQ49_04230 PF00111 2Fe-2S iron-sulfur cluster binding domain FDQ49_04230 PF00175 Oxidoreductase NAD-binding domain FDQ49_04245 PF07690 Major Facilitator Superfamily FDQ49_04250 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_04255 PF00171 Aldehyde dehydrogenase family FDQ49_04265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_04265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_04265 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_04270 PF03573 outer membrane porin, OprD family FDQ49_04280 PF07519 Tannase and feruloyl esterase FDQ49_04285 PF00892 EamA-like transporter family FDQ49_04295 PF12833 Helix-turn-helix domain FDQ49_04295 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDQ49_04300 PF00171 Aldehyde dehydrogenase family FDQ49_04305 PF00324 Amino acid permease FDQ49_04310 PF04958 Arginine N-succinyltransferase beta subunit FDQ49_04315 PF00202 Aminotransferase class-III FDQ49_04325 PF00171 Aldehyde dehydrogenase family FDQ49_04335 PF00392 Bacterial regulatory proteins, gntR family FDQ49_04335 PF07729 FCD domain FDQ49_04345 PF00324 Amino acid permease FDQ49_04350 PF01266 FAD dependent oxidoreductase FDQ49_04355 PF00324 Amino acid permease FDQ49_04365 PF05643 Putative bacterial lipoprotein (DUF799) FDQ49_04375 PF03783 Curli production assembly/transport component CsgG FDQ49_04390 PF14220 Domain of unknown function (DUF4329) FDQ49_04390 PF03527 RHS protein FDQ49_04390 PF05593 RHS Repeat FDQ49_04395 PF16671 Actin cross-linking domain FDQ49_04395 PF04717 Type VI secretion system, phage-baseplate injector FDQ49_04410 PF03180 NLPA lipoprotein FDQ49_04420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDQ49_04420 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_04430 PF00764 Arginosuccinate synthase FDQ49_04435 PF00563 EAL domain FDQ49_04435 PF00360 Phytochrome region FDQ49_04435 PF01590 GAF domain FDQ49_04435 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_04440 PF01979 Amidohydrolase family FDQ49_04445 PF00929 Exonuclease FDQ49_04465 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_04465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDQ49_04470 PF00005 ABC transporter FDQ49_04470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDQ49_04475 PF12911 N-terminal TM domain of oligopeptide transport permease C FDQ49_04475 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_04480 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_04485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDQ49_04490 PF01464 Transglycosylase SLT domain FDQ49_04490 PF01476 LysM domain FDQ49_04490 PF01464 Transglycosylase SLT domain FDQ49_04490 PF01476 LysM domain FDQ49_04495 PF00929 Exonuclease FDQ49_04505 PF00293 NUDIX domain FDQ49_04505 PF09297 NADH pyrophosphatase zinc ribbon domain FDQ49_04515 PF04972 BON domain FDQ49_04520 PF02021 Uncharacterised protein family UPF0102 FDQ49_04525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDQ49_04530 PF03466 LysR substrate binding domain FDQ49_04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_04535 PF01810 LysE type translocator FDQ49_04545 PF13411 MerR HTH family regulatory protein FDQ49_04555 PF01494 FAD binding domain FDQ49_04560 PF01494 FAD binding domain FDQ49_04565 PF05195 Aminopeptidase P, N-terminal domain FDQ49_04565 PF00557 Metallopeptidase family M24 FDQ49_04600 PF01812 5-formyltetrahydrofolate cyclo-ligase family FDQ49_04610 PF05662 Coiled stalk of trimeric autotransporter adhesin FDQ49_04610 PF03895 YadA-like membrane anchor domain FDQ49_04610 PF05658 Head domain of trimeric autotransporter adhesin FDQ49_04610 PF13018 Extended Signal Peptide of Type V secretion system FDQ49_04610 PF13018 Extended Signal Peptide of Type V secretion system FDQ49_04610 PF03895 YadA-like membrane anchor domain FDQ49_04610 PF05658 Head domain of trimeric autotransporter adhesin FDQ49_04610 PF05662 Coiled stalk of trimeric autotransporter adhesin FDQ49_04620 PF13018 Extended Signal Peptide of Type V secretion system FDQ49_04620 PF05658 Head domain of trimeric autotransporter adhesin FDQ49_04620 PF03895 YadA-like membrane anchor domain FDQ49_04620 PF05662 Coiled stalk of trimeric autotransporter adhesin FDQ49_04625 PF00004 ATPase family associated with various cellular activities (AAA) FDQ49_04625 PF05362 Lon protease (S16) C-terminal proteolytic domain FDQ49_04625 PF02190 ATP-dependent protease La (LON) substrate-binding domain FDQ49_04630 PF02590 Predicted SPOUT methyltransferase FDQ49_04635 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FDQ49_04645 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FDQ49_04645 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FDQ49_04650 PF04060 Putative Fe-S cluster FDQ49_04655 PF00633 Helix-hairpin-helix motif FDQ49_04655 PF00730 HhH-GPD superfamily base excision DNA repair protein FDQ49_04655 PF10576 Iron-sulfur binding domain of endonuclease III FDQ49_04665 PF05191 Adenylate kinase, active site lid FDQ49_04680 PF03717 Penicillin-binding Protein dimerisation domain FDQ49_04680 PF00905 Penicillin binding protein transpeptidase domain FDQ49_04700 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDQ49_04705 PF01730 UreF FDQ49_04710 PF02814 UreE urease accessory protein, N-terminal domain FDQ49_04710 PF05194 UreE urease accessory protein, C-terminal domain FDQ49_04715 PF01979 Amidohydrolase family FDQ49_04715 PF00449 Urease alpha-subunit, N-terminal domain FDQ49_04720 PF00699 Urease beta subunit FDQ49_04725 PF00547 Urease, gamma subunit FDQ49_04730 PF01774 UreD urease accessory protein FDQ49_04745 PF00463 Isocitrate lyase family FDQ49_04750 PF03466 LysR substrate binding domain FDQ49_04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_04755 PF00571 CBS domain FDQ49_04755 PF03471 Transporter associated domain FDQ49_04755 PF01595 Cyclin M transmembrane N-terminal domain FDQ49_04760 PF03600 Citrate transporter FDQ49_04775 PF00009 Elongation factor Tu GTP binding domain FDQ49_04780 PF01507 Phosphoadenosine phosphosulfate reductase family FDQ49_04790 PF14052 Capsule assembly protein Wzi FDQ49_04795 PF00152 tRNA synthetases class II (D, K and N) FDQ49_04795 PF01336 OB-fold nucleic acid binding domain FDQ49_04810 PF00301 Rubredoxin FDQ49_04815 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_04815 PF18113 Rubredoxin binding C-terminal domain FDQ49_04820 PF00561 alpha/beta hydrolase fold FDQ49_04825 PF03466 LysR substrate binding domain FDQ49_04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_04835 PF13090 Polyphosphate kinase C-terminal domain 2 FDQ49_04835 PF13089 Polyphosphate kinase N-terminal domain FDQ49_04835 PF02503 Polyphosphate kinase middle domain FDQ49_04835 PF17941 Polyphosphate kinase C-terminal domain 1 FDQ49_04840 PF00912 Transglycosylase FDQ49_04845 PF01694 Rhomboid family FDQ49_04855 PF00005 ABC transporter FDQ49_04860 PF13472 GDSL-like Lipase/Acylhydrolase family FDQ49_04865 PF00484 Carbonic anhydrase FDQ49_04870 PF00561 alpha/beta hydrolase fold FDQ49_04880 PF00593 TonB dependent receptor FDQ49_04880 PF07715 TonB-dependent Receptor Plug Domain FDQ49_04885 PF01106 NifU-like domain FDQ49_04885 PF01521 Iron-sulphur cluster biosynthesis FDQ49_04895 PF00884 Sulfatase FDQ49_04900 PF03781 Sulfatase-modifying factor enzyme 1 FDQ49_04915 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_04920 PF01384 Phosphate transporter family FDQ49_04925 PF02574 Homocysteine S-methyltransferase FDQ49_04925 PF00809 Pterin binding enzyme FDQ49_04925 PF02965 Vitamin B12 dependent methionine synthase, activation domain FDQ49_04925 PF02607 B12 binding domain FDQ49_04925 PF02310 B12 binding domain FDQ49_04940 PF01263 Aldose 1-epimerase FDQ49_04945 PF07690 Major Facilitator Superfamily FDQ49_04950 PF12833 Helix-turn-helix domain FDQ49_04950 PF07883 Cupin domain FDQ49_04955 PF04960 Glutaminase FDQ49_04960 PF01327 Polypeptide deformylase FDQ49_04965 PF00083 Sugar (and other) transporter FDQ49_04965 PF08946 Osmosensory transporter coiled coil FDQ49_04975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDQ49_04975 PF00205 Thiamine pyrophosphate enzyme, central domain FDQ49_04975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDQ49_04980 PF00171 Aldehyde dehydrogenase family FDQ49_04985 PF01958 Domain of unknown function DUF108 FDQ49_04985 PF03447 Homoserine dehydrogenase, NAD binding domain FDQ49_04995 PF12697 Alpha/beta hydrolase family FDQ49_05005 PF07690 Major Facilitator Superfamily FDQ49_05010 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_05010 PF14759 Reductase C-terminal FDQ49_05015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDQ49_05025 PF00355 Rieske [2Fe-2S] domain FDQ49_05035 PF00355 Rieske [2Fe-2S] domain FDQ49_05040 PF01614 Bacterial transcriptional regulator FDQ49_05040 PF09339 IclR helix-turn-helix domain FDQ49_05065 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_05075 PF00535 Glycosyl transferase family 2 FDQ49_05080 PF14883 Hypothetical glycosyl hydrolase family 13 FDQ49_05080 PF01522 Polysaccharide deacetylase FDQ49_05085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDQ49_05090 PF07152 YaeQ protein FDQ49_05095 PF00375 Sodium:dicarboxylate symporter family FDQ49_05100 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDQ49_05100 PF07683 Cobalamin synthesis protein cobW C-terminal domain FDQ49_05110 PF03061 Thioesterase superfamily FDQ49_05120 PF02028 BCCT, betaine/carnitine/choline family transporter FDQ49_05125 PF02028 BCCT, betaine/carnitine/choline family transporter FDQ49_05130 PF00440 Bacterial regulatory proteins, tetR family FDQ49_05130 PF13977 BetI-type transcriptional repressor, C-terminal FDQ49_05135 PF00171 Aldehyde dehydrogenase family FDQ49_05140 PF00732 GMC oxidoreductase FDQ49_05140 PF05199 GMC oxidoreductase FDQ49_05145 PF06039 Malate:quinone oxidoreductase (Mqo) FDQ49_05155 PF02574 Homocysteine S-methyltransferase FDQ49_05160 PF13520 Amino acid permease FDQ49_05180 PF00701 Dihydrodipicolinate synthetase family FDQ49_05185 PF00083 Sugar (and other) transporter FDQ49_05195 PF04851 Type III restriction enzyme, res subunit FDQ49_05195 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FDQ49_05195 PF00271 Helicase conserved C-terminal domain FDQ49_05195 PF08463 EcoEI R protein C-terminal FDQ49_05200 PF01420 Type I restriction modification DNA specificity domain FDQ49_05205 PF02384 N-6 DNA Methylase FDQ49_05205 PF12161 HsdM N-terminal domain FDQ49_05240 PF02384 N-6 DNA Methylase FDQ49_05255 PF00989 PAS fold FDQ49_05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_05255 PF00672 HAMP domain FDQ49_05255 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_05270 PF07690 Major Facilitator Superfamily FDQ49_05275 PF13533 Biotin-lipoyl like FDQ49_05280 PF03061 Thioesterase superfamily FDQ49_05285 PF00490 Delta-aminolevulinic acid dehydratase FDQ49_05290 PF01266 FAD dependent oxidoreductase FDQ49_05295 PF08338 Domain of unknown function (DUF1731) FDQ49_05295 PF01370 NAD dependent epimerase/dehydratase family FDQ49_05315 PF00149 Calcineurin-like phosphoesterase FDQ49_05315 PF12320 Type 5 capsule protein repressor C-terminal domain FDQ49_05325 PF02673 Bacitracin resistance protein BacA FDQ49_05330 PF01168 Alanine racemase, N-terminal domain FDQ49_05335 PF00437 Type II/IV secretion system protein FDQ49_05340 PF00437 Type II/IV secretion system protein FDQ49_05345 PF01475 Ferric uptake regulator family FDQ49_05350 PF04355 SmpA / OmlA family FDQ49_05355 PF03658 RnfH family Ubiquitin FDQ49_05370 PF01814 Hemerythrin HHE cation binding domain FDQ49_05375 PF13230 Glutamine amidotransferases class-II FDQ49_05385 PF00696 Amino acid kinase family FDQ49_05390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDQ49_05390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDQ49_05390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDQ49_05390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDQ49_05395 PF00692 dUTPase FDQ49_05400 PF00580 UvrD/REP helicase N-terminal domain FDQ49_05400 PF13361 UvrD-like helicase C-terminal domain FDQ49_05405 PF00691 OmpA family FDQ49_05405 PF13488 Glycine zipper FDQ49_05410 PF01553 Acyltransferase FDQ49_05420 PF03775 Septum formation inhibitor MinC, C-terminal domain FDQ49_05425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FDQ49_05430 PF03776 Septum formation topological specificity factor MinE FDQ49_05440 PF01810 LysE type translocator FDQ49_05445 PF17854 FtsK alpha domain FDQ49_05445 PF09397 Ftsk gamma domain FDQ49_05445 PF01580 FtsK/SpoIIIE family FDQ49_05445 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FDQ49_05450 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_05455 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FDQ49_05460 PF04377 Arginine-tRNA-protein transferase, C terminus FDQ49_05460 PF04376 Arginine-tRNA-protein transferase, N terminus FDQ49_05465 PF00583 Acetyltransferase (GNAT) family FDQ49_05480 PF03144 Elongation factor Tu domain 2 FDQ49_05480 PF03143 Elongation factor Tu C-terminal domain FDQ49_05480 PF00009 Elongation factor Tu GTP binding domain FDQ49_05485 PF00679 Elongation factor G C-terminus FDQ49_05485 PF03764 Elongation factor G, domain IV FDQ49_05485 PF03144 Elongation factor Tu domain 2 FDQ49_05485 PF00009 Elongation factor Tu GTP binding domain FDQ49_05485 PF14492 Elongation Factor G, domain II FDQ49_05490 PF00177 Ribosomal protein S7p/S5e FDQ49_05495 PF00164 Ribosomal protein S12/S23 FDQ49_05505 PF00109 Beta-ketoacyl synthase, N-terminal domain FDQ49_05505 PF02801 Beta-ketoacyl synthase, C-terminal domain FDQ49_05515 PF02678 Pirin FDQ49_05515 PF05726 Pirin C-terminal cupin domain FDQ49_05525 PF02540 NAD synthase FDQ49_05525 PF00795 Carbon-nitrogen hydrolase FDQ49_05540 PF00970 Oxidoreductase FAD-binding domain FDQ49_05540 PF00111 2Fe-2S iron-sulfur cluster binding domain FDQ49_05540 PF00175 Oxidoreductase NAD-binding domain FDQ49_05545 PF00171 Aldehyde dehydrogenase family FDQ49_05550 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDQ49_05550 PF00355 Rieske [2Fe-2S] domain FDQ49_05555 PF07859 alpha/beta hydrolase fold FDQ49_05560 PF02028 BCCT, betaine/carnitine/choline family transporter FDQ49_05565 PF00180 Isocitrate/isopropylmalate dehydrogenase FDQ49_05570 PF03466 LysR substrate binding domain FDQ49_05570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_05590 PF00037 4Fe-4S binding domain FDQ49_05595 PF01467 Cytidylyltransferase-like FDQ49_05600 PF01668 SmpB protein FDQ49_05605 PF03358 NADPH-dependent FMN reductase FDQ49_05615 PF00849 RNA pseudouridylate synthase FDQ49_05615 PF01479 S4 domain FDQ49_05620 PF13525 Outer membrane lipoprotein FDQ49_05625 PF08278 DNA primase DnaG DnaB-binding FDQ49_05625 PF10410 DnaB-helicase binding domain of primase FDQ49_05625 PF01807 CHC2 zinc finger FDQ49_05625 PF08275 DNA primase catalytic core, N-terminal domain FDQ49_05630 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FDQ49_05630 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FDQ49_05630 PF01488 Shikimate / quinate 5-dehydrogenase FDQ49_05640 PF03550 Outer membrane lipoprotein LolB FDQ49_05645 PF00288 GHMP kinases N terminal domain FDQ49_05645 PF08544 GHMP kinases C terminal FDQ49_05670 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FDQ49_05670 PF14572 Phosphoribosyl synthetase-associated domain FDQ49_05675 PF01386 Ribosomal L25p family FDQ49_05680 PF01195 Peptidyl-tRNA hydrolase FDQ49_05685 PF02261 Aspartate decarboxylase FDQ49_05700 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDQ49_05710 PF02581 Thiamine monophosphate synthase FDQ49_05710 PF03070 TENA/THI-4/PQQC family FDQ49_05710 PF08543 Phosphomethylpyrimidine kinase FDQ49_05715 PF01476 LysM domain FDQ49_05715 PF04972 BON domain FDQ49_05720 PF00550 Phosphopantetheine attachment site FDQ49_05730 PF00698 Acyl transferase domain FDQ49_05735 PF01783 Ribosomal L32p protein family FDQ49_05740 PF02620 Large ribosomal RNA subunit accumulation protein YceD FDQ49_05745 PF04315 Elongation factor P hydroxylase FDQ49_05750 PF01300 Telomere recombination FDQ49_05755 PF02616 Segregation and condensation protein ScpA FDQ49_05760 PF04079 Segregation and condensation complex subunit ScpB FDQ49_05765 PF01479 S4 domain FDQ49_05765 PF00849 RNA pseudouridylate synthase FDQ49_05780 PF00155 Aminotransferase class I and II FDQ49_05785 PF06968 Biotin and Thiamin Synthesis associated domain FDQ49_05785 PF04055 Radical SAM superfamily FDQ49_05785 PF00202 Aminotransferase class-III FDQ49_05790 PF08241 Methyltransferase domain FDQ49_05790 PF12697 Alpha/beta hydrolase family FDQ49_05795 PF02358 Trehalose-phosphatase FDQ49_05800 PF00982 Glycosyltransferase family 20 FDQ49_05805 PF07690 Major Facilitator Superfamily FDQ49_05810 PF00210 Ferritin-like domain FDQ49_05815 PF12826 Helix-hairpin-helix motif FDQ49_05815 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FDQ49_05815 PF00533 BRCA1 C Terminus (BRCT) domain FDQ49_05815 PF03120 NAD-dependent DNA ligase OB-fold domain FDQ49_05815 PF01653 NAD-dependent DNA ligase adenylation domain FDQ49_05825 PF02463 RecF/RecN/SMC N terminal domain FDQ49_05825 PF06470 SMC proteins Flexible Hinge Domain FDQ49_05835 PF01925 Sulfite exporter TauE/SafE FDQ49_05845 PF03309 Type III pantothenate kinase FDQ49_05850 PF02978 Signal peptide binding domain FDQ49_05850 PF00448 SRP54-type protein, GTPase domain FDQ49_05850 PF02881 SRP54-type protein, helical bundle domain FDQ49_05860 PF01207 Dihydrouridine synthase (Dus) FDQ49_05895 PF00692 dUTPase FDQ49_05910 PF01048 Phosphorylase superfamily FDQ49_05915 PF10609 NUBPL iron-transfer P-loop NTPase FDQ49_05930 PF01588 Putative tRNA binding domain FDQ49_05930 PF09334 tRNA synthetases class I (M) FDQ49_05960 PF13533 Biotin-lipoyl like FDQ49_05965 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_05980 PF05552 Conserved TM helix FDQ49_05995 PF00970 Oxidoreductase FAD-binding domain FDQ49_05995 PF00175 Oxidoreductase NAD-binding domain FDQ49_06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_06000 PF03466 LysR substrate binding domain FDQ49_06010 PF00313 'Cold-shock' DNA-binding domain FDQ49_06020 PF00361 Proton-conducting membrane transporter FDQ49_06025 PF00361 Proton-conducting membrane transporter FDQ49_06030 PF00361 Proton-conducting membrane transporter FDQ49_06030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FDQ49_06035 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FDQ49_06040 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FDQ49_06045 PF12838 4Fe-4S dicluster domain FDQ49_06050 PF00146 NADH dehydrogenase FDQ49_06055 PF00384 Molybdopterin oxidoreductase FDQ49_06055 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FDQ49_06055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDQ49_06060 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FDQ49_06060 PF10531 SLBB domain FDQ49_06060 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FDQ49_06070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FDQ49_06070 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FDQ49_06075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FDQ49_06080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FDQ49_06085 PF17151 Periplasmic sensor domain FDQ49_06085 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_06095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_06095 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_06095 PF00672 HAMP domain FDQ49_06100 PF00486 Transcriptional regulatory protein, C terminal FDQ49_06100 PF00072 Response regulator receiver domain FDQ49_06110 PF03477 ATP cone domain FDQ49_06110 PF00317 Ribonucleotide reductase, all-alpha domain FDQ49_06110 PF02867 Ribonucleotide reductase, barrel domain FDQ49_06120 PF00268 Ribonucleotide reductase, small chain FDQ49_06125 PF02567 Phenazine biosynthesis-like protein FDQ49_06145 PF17074 Darcynin, domain of unknown function FDQ49_06150 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FDQ49_06150 PF06594 Haemolysin-type calcium binding protein related domain FDQ49_06160 PF16295 Tetracyclin repressor-like, C-terminal domain FDQ49_06160 PF00440 Bacterial regulatory proteins, tetR family FDQ49_06170 PF01613 Flavin reductase like domain FDQ49_06175 PF01717 Cobalamin-independent synthase, Catalytic domain FDQ49_06175 PF08267 Cobalamin-independent synthase, N-terminal domain FDQ49_06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_06185 PF03466 LysR substrate binding domain FDQ49_06190 PF01810 LysE type translocator FDQ49_06200 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDQ49_06200 PF12833 Helix-turn-helix domain FDQ49_06205 PF07687 Peptidase dimerisation domain FDQ49_06205 PF01546 Peptidase family M20/M25/M40 FDQ49_06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_06215 PF03466 LysR substrate binding domain FDQ49_06225 PF07690 Major Facilitator Superfamily FDQ49_06235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_06235 PF03466 LysR substrate binding domain FDQ49_06240 PF14537 Cytochrome c3 FDQ49_06240 PF00890 FAD binding domain FDQ49_06255 PF00440 Bacterial regulatory proteins, tetR family FDQ49_06255 PF17932 Tetracyclin repressor-like, C-terminal domain FDQ49_06260 PF02515 CoA-transferase family III FDQ49_06265 PF07690 Major Facilitator Superfamily FDQ49_06270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_06270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_06270 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_06275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_06275 PF03466 LysR substrate binding domain FDQ49_06280 PF08240 Alcohol dehydrogenase GroES-like domain FDQ49_06280 PF00107 Zinc-binding dehydrogenase FDQ49_06285 PF00962 Adenosine/AMP deaminase FDQ49_06310 PF02445 Quinolinate synthetase A protein FDQ49_06315 PF01960 ArgJ family FDQ49_06320 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDQ49_06320 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDQ49_06325 PF00893 Small Multidrug Resistance protein FDQ49_06340 PF00394 Multicopper oxidase FDQ49_06340 PF07731 Multicopper oxidase FDQ49_06340 PF07732 Multicopper oxidase FDQ49_06355 PF00834 Ribulose-phosphate 3 epimerase family FDQ49_06365 PF00756 Putative esterase FDQ49_06375 PF04445 Putative SAM-dependent methyltransferase FDQ49_06380 PF00814 Glycoprotease family FDQ49_06385 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_06390 PF00293 NUDIX domain FDQ49_06430 PF04715 Anthranilate synthase component I, N terminal region FDQ49_06430 PF00425 chorismate binding enzyme FDQ49_06435 PF00155 Aminotransferase class I and II FDQ49_06440 PF00815 Histidinol dehydrogenase FDQ49_06445 PF01634 ATP phosphoribosyltransferase FDQ49_06450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDQ49_06455 PF01722 BolA-like protein FDQ49_06460 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FDQ49_06465 PF00309 Sigma-54 factor, Activator interacting domain (AID) FDQ49_06465 PF04963 Sigma-54 factor, core binding domain FDQ49_06465 PF04552 Sigma-54, DNA binding domain FDQ49_06510 PF00795 Carbon-nitrogen hydrolase FDQ49_06520 PF01047 MarR family FDQ49_06525 PF02566 OsmC-like protein FDQ49_06530 PF00437 Type II/IV secretion system protein FDQ49_06550 PF00476 DNA polymerase family A FDQ49_06550 PF01612 3'-5' exonuclease FDQ49_06550 PF01367 5'-3' exonuclease, C-terminal SAM fold FDQ49_06550 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FDQ49_06555 PF02325 YGGT family FDQ49_06560 PF03807 NADP oxidoreductase coenzyme F420-dependent FDQ49_06560 PF14748 Pyrroline-5-carboxylate reductase dimerisation FDQ49_06565 PF09179 TilS substrate binding domain FDQ49_06565 PF11734 TilS substrate C-terminal domain FDQ49_06565 PF01171 PP-loop family FDQ49_06570 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FDQ49_06575 PF02541 Ppx/GppA phosphatase family FDQ49_06580 PF00085 Thioredoxin FDQ49_06585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDQ49_06585 PF07498 Rho termination factor, N-terminal domain FDQ49_06585 PF07497 Rho termination factor, RNA-binding domain FDQ49_06600 PF00216 Bacterial DNA-binding protein FDQ49_06605 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FDQ49_06605 PF03483 B3/4 domain FDQ49_06605 PF03484 tRNA synthetase B5 domain FDQ49_06605 PF03147 Ferredoxin-fold anticodon binding domain FDQ49_06605 PF01588 Putative tRNA binding domain FDQ49_06610 PF01409 tRNA synthetases class II core domain (F) FDQ49_06610 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FDQ49_06630 PF00453 Ribosomal protein L20 FDQ49_06635 PF01632 Ribosomal protein L35 FDQ49_06640 PF07690 Major Facilitator Superfamily FDQ49_06645 PF09335 SNARE associated Golgi protein FDQ49_06650 PF00043 Glutathione S-transferase, C-terminal domain FDQ49_06650 PF02798 Glutathione S-transferase, N-terminal domain FDQ49_06655 PF00707 Translation initiation factor IF-3, C-terminal domain FDQ49_06655 PF05198 Translation initiation factor IF-3, N-terminal domain FDQ49_06660 PF02824 TGS domain FDQ49_06660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDQ49_06660 PF03129 Anticodon binding domain FDQ49_06660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDQ49_06665 PF13193 AMP-binding enzyme C-terminal domain FDQ49_06665 PF00501 AMP-binding enzyme FDQ49_06670 PF04751 Protein of unknown function (DUF615) FDQ49_06675 PF00381 PTS HPr component phosphorylation site FDQ49_06680 PF03668 P-loop ATPase protein family FDQ49_06685 PF02569 Pantoate-beta-alanine ligase FDQ49_06690 PF02548 Ketopantoate hydroxymethyltransferase FDQ49_06695 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FDQ49_06700 PF01743 Poly A polymerase head domain FDQ49_06700 PF12626 Polymerase A arginine-rich C-terminus FDQ49_06700 PF12627 Probable RNA and SrmB- binding site of polymerase A FDQ49_06710 PF03819 MazG nucleotide pyrophosphohydrolase domain FDQ49_06720 PF13291 ACT domain FDQ49_06720 PF02824 TGS domain FDQ49_06720 PF04607 Region found in RelA / SpoT proteins FDQ49_06725 PF05958 tRNA (Uracil-5-)-methyltransferase FDQ49_06735 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_06740 PF01627 Hpt domain FDQ49_06740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_06740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDQ49_06740 PF00072 Response regulator receiver domain FDQ49_06740 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_06740 PF00672 HAMP domain FDQ49_06745 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_06750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDQ49_06750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDQ49_06755 PF01261 Xylose isomerase-like TIM barrel FDQ49_06765 PF00106 short chain dehydrogenase FDQ49_06770 PF02233 NAD(P) transhydrogenase beta subunit FDQ49_06775 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FDQ49_06780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FDQ49_06780 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FDQ49_06785 PF00892 EamA-like transporter family FDQ49_06795 PF07690 Major Facilitator Superfamily FDQ49_06800 PF01207 Dihydrouridine synthase (Dus) FDQ49_06810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_06810 PF03466 LysR substrate binding domain FDQ49_06820 PF00899 ThiF family FDQ49_06825 PF00694 Aconitase C-terminal domain FDQ49_06825 PF00330 Aconitase family (aconitate hydratase) FDQ49_06830 PF01026 TatD related DNase FDQ49_06845 PF16658 Class II release factor RF3, C-terminal domain FDQ49_06845 PF03144 Elongation factor Tu domain 2 FDQ49_06845 PF00009 Elongation factor Tu GTP binding domain FDQ49_06870 PF00563 EAL domain FDQ49_06870 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_06870 PF03707 Bacterial signalling protein N terminal repeat FDQ49_06875 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FDQ49_06875 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FDQ49_06880 PF10369 Small subunit of acetolactate synthase FDQ49_06885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDQ49_06885 PF00205 Thiamine pyrophosphate enzyme, central domain FDQ49_06885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDQ49_06895 PF09334 tRNA synthetases class I (M) FDQ49_06895 PF00133 tRNA synthetases class I (I, L, M and V) FDQ49_06895 PF08264 Anticodon-binding domain of tRNA FDQ49_06895 PF13603 Leucyl-tRNA synthetase, Domain 2 FDQ49_06910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDQ49_06915 PF00005 ABC transporter FDQ49_06915 PF02687 FtsX-like permease family FDQ49_06915 PF12704 MacB-like periplasmic core domain FDQ49_06920 PF02321 Outer membrane efflux protein FDQ49_06935 PF00929 Exonuclease FDQ49_06940 PF03193 RsgA GTPase FDQ49_06950 PF00462 Glutaredoxin FDQ49_06955 PF02556 Preprotein translocase subunit SecB FDQ49_06965 PF01926 50S ribosome-binding GTPase FDQ49_06965 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FDQ49_06970 PF13360 PQQ-like domain FDQ49_06970 PF01011 PQQ enzyme repeat FDQ49_06980 PF13393 Histidyl-tRNA synthetase FDQ49_06980 PF03129 Anticodon binding domain FDQ49_06985 PF04551 GcpE protein FDQ49_06990 PF13464 Domain of unknown function (DUF4115) FDQ49_07000 PF04055 Radical SAM superfamily FDQ49_07005 PF00334 Nucleoside diphosphate kinase FDQ49_07010 PF04384 Iron-sulphur cluster assembly FDQ49_07015 PF01569 PAP2 superfamily FDQ49_07020 PF13439 Glycosyltransferase Family 4 FDQ49_07020 PF00534 Glycosyl transferases group 1 FDQ49_07025 PF11818 C-terminal domain of tail specific protease (DUF3340) FDQ49_07025 PF17804 Tail specific protease N-terminal domain FDQ49_07025 PF00595 PDZ domain FDQ49_07025 PF03572 Peptidase family S41 FDQ49_07030 PF00933 Glycosyl hydrolase family 3 N terminal domain FDQ49_07040 PF12697 Alpha/beta hydrolase family FDQ49_07045 PF00171 Aldehyde dehydrogenase family FDQ49_07050 PF00171 Aldehyde dehydrogenase family FDQ49_07055 PF01202 Shikimate kinase FDQ49_07060 PF02447 GntP family permease FDQ49_07065 PF01081 KDPG and KHG aldolase FDQ49_07070 PF00920 Dehydratase family FDQ49_07075 PF00871 Acetokinase family FDQ49_07080 PF07085 DRTGG domain FDQ49_07080 PF01515 Phosphate acetyl/butaryl transferase FDQ49_07085 PF05683 Fumarase C-terminus FDQ49_07085 PF05681 Fumarate hydratase (Fumerase) FDQ49_07100 PF07724 AAA domain (Cdc48 subfamily) FDQ49_07100 PF06689 ClpX C4-type zinc finger FDQ49_07100 PF10431 C-terminal, D2-small domain, of ClpB protein FDQ49_07105 PF00574 Clp protease FDQ49_07110 PF05698 Bacterial trigger factor protein (TF) C-terminus FDQ49_07110 PF05697 Bacterial trigger factor protein (TF) FDQ49_07110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDQ49_07115 PF07715 TonB-dependent Receptor Plug Domain FDQ49_07115 PF00593 TonB dependent receptor FDQ49_07120 PF18331 PKHD-type hydroxylase C-terminal domain FDQ49_07120 PF13640 2OG-Fe(II) oxygenase superfamily FDQ49_07125 PF08502 LeuA allosteric (dimerisation) domain FDQ49_07125 PF00682 HMGL-like FDQ49_07130 PF00561 alpha/beta hydrolase fold FDQ49_07135 PF00561 alpha/beta hydrolase fold FDQ49_07135 PF07021 Methionine biosynthesis protein MetW FDQ49_07145 PF01725 Ham1 family FDQ49_07155 PF02416 mttA/Hcf106 family FDQ49_07160 PF02416 mttA/Hcf106 family FDQ49_07165 PF00902 Sec-independent protein translocase protein (TatC) FDQ49_07185 PF01790 Prolipoprotein diacylglyceryl transferase FDQ49_07200 PF00303 Thymidylate synthase FDQ49_07205 PF00186 Dihydrofolate reductase FDQ49_07220 PF01625 Peptide methionine sulfoxide reductase FDQ49_07225 PF02472 Biopolymer transport protein ExbD/TolR FDQ49_07230 PF01618 MotA/TolQ/ExbB proton channel family FDQ49_07240 PF00551 Formyl transferase FDQ49_07240 PF01842 ACT domain FDQ49_07250 PF00171 Aldehyde dehydrogenase family FDQ49_07255 PF00830 Ribosomal L28 family FDQ49_07260 PF00471 Ribosomal protein L33 FDQ49_07265 PF00999 Sodium/hydrogen exchanger family FDQ49_07265 PF02254 TrkA-N domain FDQ49_07285 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FDQ49_07290 PF00580 UvrD/REP helicase N-terminal domain FDQ49_07290 PF13361 UvrD-like helicase C-terminal domain FDQ49_07305 PF01396 Topoisomerase DNA binding C4 zinc finger FDQ49_07305 PF01751 Toprim domain FDQ49_07305 PF01131 DNA topoisomerase FDQ49_07305 PF08272 Topoisomerase I zinc-ribbon-like FDQ49_07315 PF01638 HxlR-like helix-turn-helix FDQ49_07320 PF08240 Alcohol dehydrogenase GroES-like domain FDQ49_07320 PF00107 Zinc-binding dehydrogenase FDQ49_07325 PF04102 SlyX FDQ49_07340 PF01810 LysE type translocator FDQ49_07345 PF03279 Bacterial lipid A biosynthesis acyltransferase FDQ49_07355 PF00375 Sodium:dicarboxylate symporter family FDQ49_07365 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDQ49_07365 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDQ49_07385 PF01416 tRNA pseudouridine synthase FDQ49_07395 PF01176 Translation initiation factor 1A / IF-1 FDQ49_07410 PF00180 Isocitrate/isopropylmalate dehydrogenase FDQ49_07420 PF00694 Aconitase C-terminal domain FDQ49_07425 PF00330 Aconitase family (aconitate hydratase) FDQ49_07435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_07435 PF03466 LysR substrate binding domain FDQ49_07460 PF00293 NUDIX domain FDQ49_07465 PF02896 PEP-utilising enzyme, TIM barrel domain FDQ49_07465 PF00391 PEP-utilising enzyme, mobile domain FDQ49_07465 PF05524 PEP-utilising enzyme, N-terminal FDQ49_07465 PF01590 GAF domain FDQ49_07470 PF00141 Peroxidase FDQ49_07475 PF12706 Beta-lactamase superfamily domain FDQ49_07480 PF03466 LysR substrate binding domain FDQ49_07480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_07490 PF02798 Glutathione S-transferase, N-terminal domain FDQ49_07495 PF08279 HTH domain FDQ49_07495 PF13280 WYL domain FDQ49_07505 PF01479 S4 domain FDQ49_07505 PF00849 RNA pseudouridylate synthase FDQ49_07515 PF12111 Polyribonucleotide phosphorylase C terminal FDQ49_07515 PF10150 Ribonuclease E/G family FDQ49_07515 PF00575 S1 RNA binding domain FDQ49_07520 PF13193 AMP-binding enzyme C-terminal domain FDQ49_07520 PF00501 AMP-binding enzyme FDQ49_07535 PF03466 LysR substrate binding domain FDQ49_07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_07545 PF04055 Radical SAM superfamily FDQ49_07545 PF06969 HemN C-terminal domain FDQ49_07555 PF01554 MatE FDQ49_07560 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_07560 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_07560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_07565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_07565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_07570 PF03109 ABC1 family FDQ49_07575 PF01197 Ribosomal protein L31 FDQ49_07585 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FDQ49_07605 PF03884 DNA gyrase inhibitor YacG FDQ49_07610 PF00753 Metallo-beta-lactamase superfamily FDQ49_07615 PF00762 Ferrochelatase FDQ49_07625 PF01177 Asp/Glu/Hydantoin racemase FDQ49_07645 PF01206 Sulfurtransferase TusA FDQ49_07650 PF03471 Transporter associated domain FDQ49_07650 PF00571 CBS domain FDQ49_07655 PF00795 Carbon-nitrogen hydrolase FDQ49_07660 PF01588 Putative tRNA binding domain FDQ49_07675 PF07963 Prokaryotic N-terminal methylation motif FDQ49_07675 PF08334 Type II secretion system (T2SS), protein G FDQ49_07680 PF00482 Type II secretion system (T2SS), protein F FDQ49_07685 PF18074 Primosomal protein N C-terminal domain FDQ49_07685 PF17764 3′ DNA-binding domain (3′BD) FDQ49_07685 PF00271 Helicase conserved C-terminal domain FDQ49_07685 PF00270 DEAD/DEAH box helicase FDQ49_07685 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FDQ49_07690 PF02254 TrkA-N domain FDQ49_07690 PF00999 Sodium/hydrogen exchanger family FDQ49_07695 PF01430 Hsp33 protein FDQ49_07705 PF00226 DnaJ domain FDQ49_07705 PF01556 DnaJ C terminal domain FDQ49_07715 PF01544 CorA-like Mg2+ transporter protein FDQ49_07720 PF03725 3' exoribonuclease family, domain 2 FDQ49_07720 PF01138 3' exoribonuclease family, domain 1 FDQ49_07720 PF00013 KH domain FDQ49_07720 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FDQ49_07720 PF00575 S1 RNA binding domain FDQ49_07725 PF00312 Ribosomal protein S15 FDQ49_07735 PF13538 UvrD-like helicase C-terminal domain FDQ49_07740 PF12705 PD-(D/E)XK nuclease superfamily FDQ49_07740 PF13361 UvrD-like helicase C-terminal domain FDQ49_07740 PF00580 UvrD/REP helicase N-terminal domain FDQ49_07745 PF17946 RecC C-terminal domain FDQ49_07755 PF07690 Major Facilitator Superfamily FDQ49_07760 PF03976 Polyphosphate kinase 2 (PPK2) FDQ49_07770 PF01209 ubiE/COQ5 methyltransferase family FDQ49_07780 PF03109 ABC1 family FDQ49_07785 PF01494 FAD binding domain FDQ49_07790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDQ49_07795 PF01502 Phosphoribosyl-AMP cyclohydrolase FDQ49_07810 PF13244 Domain of unknown function (DUF4040) FDQ49_07810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FDQ49_07810 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FDQ49_07810 PF00361 Proton-conducting membrane transporter FDQ49_07815 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FDQ49_07820 PF00361 Proton-conducting membrane transporter FDQ49_07830 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FDQ49_07840 PF02033 Ribosome-binding factor A FDQ49_07845 PF08364 Bacterial translation initiation factor IF-2 associated region FDQ49_07845 PF00009 Elongation factor Tu GTP binding domain FDQ49_07845 PF04760 Translation initiation factor IF-2, N-terminal region FDQ49_07845 PF11987 Translation-initiation factor 2 FDQ49_07850 PF00575 S1 RNA binding domain FDQ49_07850 PF08529 NusA N-terminal domain FDQ49_07850 PF13184 NusA-like KH domain FDQ49_07855 PF17384 RimP C-terminal SH3 domain FDQ49_07855 PF02576 RimP N-terminal domain FDQ49_07875 PF03840 Preprotein translocase SecG subunit FDQ49_07880 PF00121 Triosephosphate isomerase FDQ49_07885 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDQ49_07885 PF00437 Type II/IV secretion system protein FDQ49_07890 PF00482 Type II secretion system (T2SS), protein F FDQ49_07895 PF01478 Type IV leader peptidase family FDQ49_07895 PF06750 Bacterial Peptidase A24 N-terminal domain FDQ49_07900 PF01121 Dephospho-CoA kinase FDQ49_07910 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDQ49_07910 PF00588 SpoU rRNA Methylase family FDQ49_07915 PF06865 Pyrimidine/purine nucleoside phosphorylase FDQ49_07925 PF02463 RecF/RecN/SMC N terminal domain FDQ49_07930 PF02622 Uncharacterized ACR, COG1678 FDQ49_07935 PF03652 Holliday junction resolvase FDQ49_07940 PF13533 Biotin-lipoyl like FDQ49_07950 PF04632 Fusaric acid resistance protein family FDQ49_07965 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDQ49_07965 PF02805 Metal binding domain of Ada FDQ49_07965 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDQ49_07965 PF12833 Helix-turn-helix domain FDQ49_07970 PF01066 CDP-alcohol phosphatidyltransferase FDQ49_07980 PF01541 GIY-YIG catalytic domain FDQ49_07980 PF02151 UvrB/uvrC motif FDQ49_07980 PF08459 UvrC Helix-hairpin-helix N-terminal FDQ49_08005 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_08005 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDQ49_08005 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDQ49_08010 PF00108 Thiolase, N-terminal domain FDQ49_08010 PF02803 Thiolase, C-terminal domain FDQ49_08020 PF00183 Hsp90 protein FDQ49_08025 PF06821 Serine hydrolase FDQ49_08030 PF00376 MerR family regulatory protein FDQ49_08030 PF09278 MerR, DNA binding FDQ49_08040 PF01323 DSBA-like thioredoxin domain FDQ49_08055 PF00183 Hsp90 protein FDQ49_08055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_08070 PF13726 Na+-H+ antiporter family FDQ49_08070 PF03553 Na+/H+ antiporter family FDQ49_08075 PF00561 alpha/beta hydrolase fold FDQ49_08100 PF04998 RNA polymerase Rpb1, domain 5 FDQ49_08100 PF05000 RNA polymerase Rpb1, domain 4 FDQ49_08100 PF00623 RNA polymerase Rpb1, domain 2 FDQ49_08100 PF04997 RNA polymerase Rpb1, domain 1 FDQ49_08100 PF04983 RNA polymerase Rpb1, domain 3 FDQ49_08105 PF04563 RNA polymerase beta subunit FDQ49_08105 PF04565 RNA polymerase Rpb2, domain 3 FDQ49_08105 PF04560 RNA polymerase Rpb2, domain 7 FDQ49_08105 PF04561 RNA polymerase Rpb2, domain 2 FDQ49_08105 PF10385 RNA polymerase beta subunit external 1 domain FDQ49_08105 PF00562 RNA polymerase Rpb2, domain 6 FDQ49_08110 PF00542 Ribosomal protein L7/L12 C-terminal domain FDQ49_08110 PF16320 Ribosomal protein L7/L12 dimerisation domain FDQ49_08115 PF00466 Ribosomal protein L10 FDQ49_08120 PF00687 Ribosomal protein L1p/L10e family FDQ49_08125 PF03946 Ribosomal protein L11, N-terminal domain FDQ49_08125 PF00298 Ribosomal protein L11, RNA binding domain FDQ49_08130 PF02357 Transcription termination factor nusG FDQ49_08130 PF00467 KOW motif FDQ49_08135 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FDQ49_08145 PF03144 Elongation factor Tu domain 2 FDQ49_08145 PF00009 Elongation factor Tu GTP binding domain FDQ49_08145 PF03143 Elongation factor Tu C-terminal domain FDQ49_08170 PF04715 Anthranilate synthase component I, N terminal region FDQ49_08170 PF00425 chorismate binding enzyme FDQ49_08175 PF13419 Haloacid dehalogenase-like hydrolase FDQ49_08180 PF00498 FHA domain FDQ49_08180 PF12401 Protein of unknown function (DUF2662) FDQ49_08185 PF03958 Bacterial type II/III secretion system short domain FDQ49_08185 PF00263 Bacterial type II and III secretion system protein FDQ49_08200 PF00816 H-NS histone family FDQ49_08225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FDQ49_08225 PF03900 Porphobilinogen deaminase, C-terminal domain FDQ49_08230 PF04397 LytTr DNA-binding domain FDQ49_08230 PF00072 Response regulator receiver domain FDQ49_08235 PF07694 5TMR of 5TMR-LYT FDQ49_08235 PF06580 Histidine kinase FDQ49_08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_08240 PF14698 Argininosuccinate lyase C-terminal FDQ49_08240 PF00206 Lyase FDQ49_08245 PF04362 Bacterial Fe(2+) trafficking FDQ49_08250 PF01895 PhoU domain FDQ49_08255 PF02321 Outer membrane efflux protein FDQ49_08265 PF00892 EamA-like transporter family FDQ49_08280 PF01964 Radical SAM ThiC family FDQ49_08280 PF13667 ThiC-associated domain FDQ49_08285 PF00293 NUDIX domain FDQ49_08290 PF00149 Calcineurin-like phosphoesterase FDQ49_08295 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDQ49_08300 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDQ49_08305 PF01098 Cell cycle protein FDQ49_08310 PF08245 Mur ligase middle domain FDQ49_08310 PF02875 Mur ligase family, glutamate ligase domain FDQ49_08320 PF07664 Ferrous iron transport protein B C terminus FDQ49_08320 PF02421 Ferrous iron transport protein B FDQ49_08320 PF07670 Nucleoside recognition FDQ49_08330 PF00589 Phage integrase family FDQ49_08330 PF02899 Phage integrase, N-terminal SAM-like domain FDQ49_08335 PF13098 Thioredoxin-like domain FDQ49_08335 PF10411 Disulfide bond isomerase protein N-terminus FDQ49_08340 PF01842 ACT domain FDQ49_08340 PF00742 Homoserine dehydrogenase FDQ49_08340 PF03447 Homoserine dehydrogenase, NAD binding domain FDQ49_08345 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_08350 PF00768 D-alanyl-D-alanine carboxypeptidase FDQ49_08355 PF00072 Response regulator receiver domain FDQ49_08355 PF00196 Bacterial regulatory proteins, luxR family FDQ49_08360 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_08365 PF02954 Bacterial regulatory protein, Fis family FDQ49_08365 PF00072 Response regulator receiver domain FDQ49_08365 PF00158 Sigma-54 interaction domain FDQ49_08370 PF03572 Peptidase family S41 FDQ49_08370 PF00595 PDZ domain FDQ49_08375 PF01676 Metalloenzyme superfamily FDQ49_08375 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FDQ49_08380 PF03739 Lipopolysaccharide export system permease LptF/LptG FDQ49_08390 PF00883 Cytosol aminopeptidase family, catalytic domain FDQ49_08390 PF02789 Cytosol aminopeptidase family, N-terminal domain FDQ49_08410 PF00677 Lumazine binding domain FDQ49_08420 PF01872 RibD C-terminal domain FDQ49_08420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDQ49_08425 PF03477 ATP cone domain FDQ49_08430 PF00909 Ammonium Transporter Family FDQ49_08435 PF00543 Nitrogen regulatory protein P-II FDQ49_08445 PF01078 Magnesium chelatase, subunit ChlI FDQ49_08445 PF13335 Magnesium chelatase, subunit ChlI C-terminal FDQ49_08450 PF00155 Aminotransferase class I and II FDQ49_08450 PF00392 Bacterial regulatory proteins, gntR family FDQ49_08455 PF00596 Class II Aldolase and Adducin N-terminal domain FDQ49_08460 PF00701 Dihydrodipicolinate synthetase family FDQ49_08470 PF03573 outer membrane porin, OprD family FDQ49_08475 PF00719 Inorganic pyrophosphatase FDQ49_08490 PF00501 AMP-binding enzyme FDQ49_08490 PF13193 AMP-binding enzyme C-terminal domain FDQ49_08495 PF03989 DNA gyrase C-terminal domain, beta-propeller FDQ49_08495 PF00521 DNA gyrase/topoisomerase IV, subunit A FDQ49_08500 PF07690 Major Facilitator Superfamily FDQ49_08505 PF03458 UPF0126 domain FDQ49_08510 PF02810 SEC-C motif FDQ49_08515 PF03471 Transporter associated domain FDQ49_08515 PF03741 Integral membrane protein TerC family FDQ49_08520 PF03641 Possible lysine decarboxylase FDQ49_08525 PF07690 Major Facilitator Superfamily FDQ49_08535 PF11798 IMS family HHH motif FDQ49_08535 PF11799 impB/mucB/samB family C-terminal domain FDQ49_08535 PF00817 impB/mucB/samB family FDQ49_08550 PF08497 Radical SAM N-terminal FDQ49_08550 PF04055 Radical SAM superfamily FDQ49_08550 PF11842 Domain of unknown function (DUF3362) FDQ49_08570 PF03358 NADPH-dependent FMN reductase FDQ49_08585 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_08620 PF00440 Bacterial regulatory proteins, tetR family FDQ49_08645 PF01327 Polypeptide deformylase FDQ49_08655 PF02481 DNA recombination-mediator protein A FDQ49_08655 PF17782 DprA winged helix domain FDQ49_08660 PF01300 Telomere recombination FDQ49_08665 PF00892 EamA-like transporter family FDQ49_08670 PF00440 Bacterial regulatory proteins, tetR family FDQ49_08675 PF07690 Major Facilitator Superfamily FDQ49_08685 PF00255 Glutathione peroxidase FDQ49_08695 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FDQ49_08700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDQ49_08700 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDQ49_08705 PF00231 ATP synthase FDQ49_08710 PF00306 ATP synthase alpha/beta chain, C terminal domain FDQ49_08710 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDQ49_08710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDQ49_08715 PF00213 ATP synthase delta (OSCP) subunit FDQ49_08720 PF00430 ATP synthase B/B' CF(0) FDQ49_08725 PF00137 ATP synthase subunit C FDQ49_08730 PF00119 ATP synthase A chain FDQ49_08750 PF00005 ABC transporter FDQ49_08755 PF00950 ABC 3 transport family FDQ49_08760 PF01810 LysE type translocator FDQ49_08765 PF04261 Dyp-type peroxidase family FDQ49_08770 PF00390 Malic enzyme, N-terminal domain FDQ49_08770 PF03949 Malic enzyme, NAD binding domain FDQ49_08775 PF03485 Arginyl tRNA synthetase N terminal domain FDQ49_08775 PF05746 DALR anticodon binding domain FDQ49_08775 PF00750 tRNA synthetases class I (R) FDQ49_08795 PF05726 Pirin C-terminal cupin domain FDQ49_08795 PF02678 Pirin FDQ49_08805 PF03551 Transcriptional regulator PadR-like family FDQ49_08810 PF13302 Acetyltransferase (GNAT) domain FDQ49_08815 PF02540 NAD synthase FDQ49_08815 PF00117 Glutamine amidotransferase class-I FDQ49_08815 PF00958 GMP synthase C terminal domain FDQ49_08820 PF04286 Protein of unknown function (DUF445) FDQ49_08825 PF07681 DoxX FDQ49_08830 PF09335 SNARE associated Golgi protein FDQ49_08845 PF13614 AAA domain FDQ49_08855 PF01722 BolA-like protein FDQ49_08870 PF01648 4'-phosphopantetheinyl transferase superfamily FDQ49_08875 PF16363 GDP-mannose 4,6 dehydratase FDQ49_08890 PF13193 AMP-binding enzyme C-terminal domain FDQ49_08890 PF00550 Phosphopantetheine attachment site FDQ49_08890 PF00501 AMP-binding enzyme FDQ49_08890 PF00668 Condensation domain FDQ49_08890 PF00975 Thioesterase domain FDQ49_08895 PF00698 Acyl transferase domain FDQ49_08895 PF14765 Polyketide synthase dehydratase FDQ49_08895 PF00550 Phosphopantetheine attachment site FDQ49_08895 PF08659 KR domain FDQ49_08895 PF02801 Beta-ketoacyl synthase, C-terminal domain FDQ49_08895 PF00109 Beta-ketoacyl synthase, N-terminal domain FDQ49_08895 PF16197 Ketoacyl-synthetase C-terminal extension FDQ49_08900 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_08900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_08900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_08905 PF00501 AMP-binding enzyme FDQ49_08910 PF03472 Autoinducer binding domain FDQ49_08910 PF00196 Bacterial regulatory proteins, luxR family FDQ49_08920 PF00765 Autoinducer synthase FDQ49_08925 PF00083 Sugar (and other) transporter FDQ49_08925 PF07690 Major Facilitator Superfamily FDQ49_08930 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_08935 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_08940 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_08940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_08940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_08945 PF00501 AMP-binding enzyme FDQ49_08945 PF13193 AMP-binding enzyme C-terminal domain FDQ49_08950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDQ49_08950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDQ49_08955 PF00171 Aldehyde dehydrogenase family FDQ49_08965 PF00324 Amino acid permease FDQ49_08970 PF00324 Amino acid permease FDQ49_08975 PF01042 Endoribonuclease L-PSP FDQ49_08980 PF01168 Alanine racemase, N-terminal domain FDQ49_08980 PF00842 Alanine racemase, C-terminal domain FDQ49_08985 PF01266 FAD dependent oxidoreductase FDQ49_08990 PF01037 Lrp/AsnC ligand binding domain FDQ49_09000 PF07715 TonB-dependent Receptor Plug Domain FDQ49_09000 PF00593 TonB dependent receptor FDQ49_09015 PF00849 RNA pseudouridylate synthase FDQ49_09035 PF00440 Bacterial regulatory proteins, tetR family FDQ49_09035 PF08361 MAATS-type transcriptional repressor, C-terminal region FDQ49_09045 PF00109 Beta-ketoacyl synthase, N-terminal domain FDQ49_09045 PF02801 Beta-ketoacyl synthase, C-terminal domain FDQ49_09080 PF00330 Aconitase family (aconitate hydratase) FDQ49_09080 PF00694 Aconitase C-terminal domain FDQ49_09085 PF00285 Citrate synthase, C-terminal domain FDQ49_09095 PF00392 Bacterial regulatory proteins, gntR family FDQ49_09095 PF07729 FCD domain FDQ49_09105 PF00155 Aminotransferase class I and II FDQ49_09110 PF01565 FAD binding domain FDQ49_09110 PF09330 D-lactate dehydrogenase, membrane binding FDQ49_09115 PF01070 FMN-dependent dehydrogenase FDQ49_09120 PF00392 Bacterial regulatory proteins, gntR family FDQ49_09120 PF07729 FCD domain FDQ49_09125 PF02652 L-lactate permease FDQ49_09130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDQ49_09130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDQ49_09130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDQ49_09130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDQ49_09140 PF00342 Phosphoglucose isomerase FDQ49_09145 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FDQ49_09145 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FDQ49_09145 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FDQ49_09150 PF00483 Nucleotidyl transferase FDQ49_09155 PF02397 Bacterial sugar transferase FDQ49_09165 PF01370 NAD dependent epimerase/dehydratase family FDQ49_09170 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_09175 PF00535 Glycosyl transferase family 2 FDQ49_09180 PF13439 Glycosyltransferase Family 4 FDQ49_09180 PF00534 Glycosyl transferases group 1 FDQ49_09195 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FDQ49_09200 PF00483 Nucleotidyl transferase FDQ49_09205 PF04321 RmlD substrate binding domain FDQ49_09210 PF16363 GDP-mannose 4,6 dehydratase FDQ49_09215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FDQ49_09215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FDQ49_09215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FDQ49_09220 PF10531 SLBB domain FDQ49_09220 PF02563 Polysaccharide biosynthesis/export protein FDQ49_09220 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FDQ49_09225 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDQ49_09230 PF13807 G-rich domain on putative tyrosine kinase FDQ49_09230 PF13614 AAA domain FDQ49_09230 PF02706 Chain length determinant protein FDQ49_09235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDQ49_09235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDQ49_09240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDQ49_09240 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDQ49_09245 PF03023 Lipid II flippase MurJ FDQ49_09250 PF01510 N-acetylmuramoyl-L-alanine amidase FDQ49_09255 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FDQ49_09255 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FDQ49_09265 PF05506 Domain of unknown function (DUF756) FDQ49_09265 PF04185 Phosphoesterase family FDQ49_09270 PF01138 3' exoribonuclease family, domain 1 FDQ49_09270 PF03725 3' exoribonuclease family, domain 2 FDQ49_09275 PF00487 Fatty acid desaturase FDQ49_09280 PF00175 Oxidoreductase NAD-binding domain FDQ49_09285 PF00440 Bacterial regulatory proteins, tetR family FDQ49_09290 PF00440 Bacterial regulatory proteins, tetR family FDQ49_09290 PF08360 QacR-like protein, C-terminal region FDQ49_09295 PF01323 DSBA-like thioredoxin domain FDQ49_09305 PF13419 Haloacid dehalogenase-like hydrolase FDQ49_09310 PF00106 short chain dehydrogenase FDQ49_09325 PF00696 Amino acid kinase family FDQ49_09325 PF00583 Acetyltransferase (GNAT) family FDQ49_09330 PF09084 NMT1/THI5 like FDQ49_09335 PF09084 NMT1/THI5 like FDQ49_09340 PF00296 Luciferase-like monooxygenase FDQ49_09345 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_09350 PF00005 ABC transporter FDQ49_09355 PF08362 YcdC-like protein, C-terminal region FDQ49_09355 PF00440 Bacterial regulatory proteins, tetR family FDQ49_09360 PF01048 Phosphorylase superfamily FDQ49_09370 PF01687 Riboflavin kinase FDQ49_09370 PF06574 FAD synthetase FDQ49_09375 PF08264 Anticodon-binding domain of tRNA FDQ49_09375 PF00133 tRNA synthetases class I (I, L, M and V) FDQ49_09375 PF06827 Zinc finger found in FPG and IleRS FDQ49_09380 PF01252 Signal peptidase (SPase) II FDQ49_09385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDQ49_09425 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDQ49_09430 PF07859 alpha/beta hydrolase fold FDQ49_09455 PF01025 GrpE FDQ49_09460 PF00012 Hsp70 protein FDQ49_09480 PF13406 Transglycosylase SLT domain FDQ49_09485 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FDQ49_09485 PF02222 ATP-grasp domain FDQ49_09490 PF00731 AIR carboxylase FDQ49_09505 PF02875 Mur ligase family, glutamate ligase domain FDQ49_09505 PF08245 Mur ligase middle domain FDQ49_09505 PF01225 Mur ligase family, catalytic domain FDQ49_09515 PF01569 PAP2 superfamily FDQ49_09520 PF03741 Integral membrane protein TerC family FDQ49_09530 PF03738 Glutathionylspermidine synthase preATP-grasp FDQ49_09535 PF00355 Rieske [2Fe-2S] domain FDQ49_09540 PF01979 Amidohydrolase family FDQ49_09545 PF00156 Phosphoribosyl transferase domain FDQ49_09555 PF13098 Thioredoxin-like domain FDQ49_09555 PF10411 Disulfide bond isomerase protein N-terminus FDQ49_09560 PF16916 Dimerisation domain of Zinc Transporter FDQ49_09560 PF01545 Cation efflux family FDQ49_09565 PF02583 Metal-sensitive transcriptional repressor FDQ49_09570 PF10396 GTP-binding protein TrmE N-terminus FDQ49_09570 PF01926 50S ribosome-binding GTPase FDQ49_09570 PF12631 MnmE helical domain FDQ49_09575 PF02096 60Kd inner membrane protein FDQ49_09575 PF14849 YidC periplasmic domain FDQ49_09580 PF01809 Putative membrane protein insertion efficiency factor FDQ49_09585 PF00825 Ribonuclease P FDQ49_09590 PF00468 Ribosomal protein L34 FDQ49_09595 PF00308 Bacterial dnaA protein FDQ49_09595 PF11638 DnaA N-terminal domain FDQ49_09595 PF08299 Bacterial dnaA protein helix-turn-helix FDQ49_09600 PF02767 DNA polymerase III beta subunit, central domain FDQ49_09600 PF02768 DNA polymerase III beta subunit, C-terminal domain FDQ49_09600 PF00712 DNA polymerase III beta subunit, N-terminal domain FDQ49_09605 PF02463 RecF/RecN/SMC N terminal domain FDQ49_09610 PF18053 DNA gyrase B subunit insert domain FDQ49_09610 PF00204 DNA gyrase B FDQ49_09610 PF01751 Toprim domain FDQ49_09610 PF00986 DNA gyrase B subunit, carboxyl terminus FDQ49_09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_09620 PF09335 SNARE associated Golgi protein FDQ49_09625 PF00005 ABC transporter FDQ49_09625 PF12848 ABC transporter FDQ49_09645 PF01521 Iron-sulphur cluster biosynthesis FDQ49_09650 PF00561 alpha/beta hydrolase fold FDQ49_09655 PF03702 Anhydro-N-acetylmuramic acid kinase FDQ49_09660 PF00579 tRNA synthetases class I (W and Y) FDQ49_09700 PF00209 Sodium:neurotransmitter symporter family FDQ49_09710 PF01189 16S rRNA methyltransferase RsmB/F FDQ49_09710 PF01029 NusB family FDQ49_09715 PF00551 Formyl transferase FDQ49_09715 PF02911 Formyl transferase, C-terminal domain FDQ49_09720 PF00920 Dehydratase family FDQ49_09735 PF03466 LysR substrate binding domain FDQ49_09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_09740 PF00860 Permease family FDQ49_09745 PF00311 Phosphoenolpyruvate carboxylase FDQ49_09750 PF08361 MAATS-type transcriptional repressor, C-terminal region FDQ49_09750 PF00440 Bacterial regulatory proteins, tetR family FDQ49_09755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDQ49_09760 PF00873 AcrB/AcrD/AcrF family FDQ49_09770 PF01556 DnaJ C terminal domain FDQ49_09770 PF00226 DnaJ domain FDQ49_09770 PF00684 DnaJ central domain FDQ49_09780 PF05173 Dihydrodipicolinate reductase, C-terminus FDQ49_09780 PF01113 Dihydrodipicolinate reductase, N-terminus FDQ49_09790 PF07690 Major Facilitator Superfamily FDQ49_09795 PF00248 Aldo/keto reductase family FDQ49_09800 PF03466 LysR substrate binding domain FDQ49_09800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_09815 PF00392 Bacterial regulatory proteins, gntR family FDQ49_09815 PF00155 Aminotransferase class I and II FDQ49_09820 PF00107 Zinc-binding dehydrogenase FDQ49_09820 PF08240 Alcohol dehydrogenase GroES-like domain FDQ49_09825 PF03352 Methyladenine glycosylase FDQ49_09840 PF10576 Iron-sulfur binding domain of endonuclease III FDQ49_09840 PF00730 HhH-GPD superfamily base excision DNA repair protein FDQ49_09840 PF00633 Helix-hairpin-helix motif FDQ49_09840 PF14815 NUDIX domain FDQ49_09855 PF07043 Protein of unknown function (DUF1328) FDQ49_09860 PF03692 Putative zinc- or iron-chelating domain FDQ49_09865 PF07995 Glucose / Sorbosone dehydrogenase FDQ49_09870 PF00004 ATPase family associated with various cellular activities (AAA) FDQ49_09870 PF12002 MgsA AAA+ ATPase C terminal FDQ49_09870 PF16193 AAA C-terminal domain FDQ49_09875 PF01226 Formate/nitrite transporter FDQ49_09885 PF01259 SAICAR synthetase FDQ49_09895 PF00701 Dihydrodipicolinate synthetase family FDQ49_09900 PF00857 Isochorismatase family FDQ49_09905 PF01758 Sodium Bile acid symporter family FDQ49_09910 PF01554 MatE FDQ49_09915 PF04463 Protein of unknown function (DUF523) FDQ49_09920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDQ49_09930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDQ49_09935 PF02798 Glutathione S-transferase, N-terminal domain FDQ49_09935 PF14497 Glutathione S-transferase, C-terminal domain FDQ49_09945 PF00324 Amino acid permease FDQ49_09955 PF07683 Cobalamin synthesis protein cobW C-terminal domain FDQ49_09955 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDQ49_09965 PF07702 UTRA domain FDQ49_09965 PF00392 Bacterial regulatory proteins, gntR family FDQ49_09970 PF05962 HutD FDQ49_09975 PF17391 Urocanase N-terminal domain FDQ49_09975 PF17392 Urocanase C-terminal domain FDQ49_09975 PF01175 Urocanase Rossmann-like domain FDQ49_09980 PF00221 Aromatic amino acid lyase FDQ49_09985 PF00324 Amino acid permease FDQ49_09990 PF01979 Amidohydrolase family FDQ49_09995 PF00491 Arginase family FDQ49_10005 PF13419 Haloacid dehalogenase-like hydrolase FDQ49_10010 PF01177 Asp/Glu/Hydantoin racemase FDQ49_10015 PF01810 LysE type translocator FDQ49_10030 PF01380 SIS domain FDQ49_10035 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_10035 PF14602 Hexapeptide repeat of succinyl-transferase FDQ49_10035 PF12804 MobA-like NTP transferase domain FDQ49_10040 PF04608 Phosphatidylglycerophosphatase A FDQ49_10045 PF02769 AIR synthase related protein, C-terminal domain FDQ49_10045 PF00586 AIR synthase related protein, N-terminal domain FDQ49_10050 PF01029 NusB family FDQ49_10055 PF00885 6,7-dimethyl-8-ribityllumazine synthase FDQ49_10060 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDQ49_10060 PF00925 GTP cyclohydrolase II FDQ49_10090 PF02580 D-Tyr-tRNA(Tyr) deacylase FDQ49_10095 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FDQ49_10095 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FDQ49_10100 PF00581 Rhodanese-like domain FDQ49_10105 PF02666 Phosphatidylserine decarboxylase FDQ49_10120 PF00989 PAS fold FDQ49_10120 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_10120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_10120 PF11808 Phosphate regulon sensor protein PhoR FDQ49_10125 PF00072 Response regulator receiver domain FDQ49_10125 PF00486 Transcriptional regulatory protein, C terminal FDQ49_10135 PF00106 short chain dehydrogenase FDQ49_10140 PF01554 MatE FDQ49_10145 PF00155 Aminotransferase class I and II FDQ49_10150 PF04286 Protein of unknown function (DUF445) FDQ49_10165 PF04262 Glutamate-cysteine ligase FDQ49_10170 PF02600 Disulfide bond formation protein DsbB FDQ49_10175 PF04717 Type VI secretion system, phage-baseplate injector FDQ49_10180 PF00877 NlpC/P60 family FDQ49_10180 PF01476 LysM domain FDQ49_10225 PF05728 Uncharacterised protein family (UPF0227) FDQ49_10230 PF01751 Toprim domain FDQ49_10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_10230 PF00986 DNA gyrase B subunit, carboxyl terminus FDQ49_10230 PF00204 DNA gyrase B FDQ49_10235 PF04115 Ureidoglycolate lyase FDQ49_10240 PF03561 Allantoicase repeat FDQ49_10245 PF01494 FAD binding domain FDQ49_10255 PF00860 Permease family FDQ49_10260 PF00576 HIUase/Transthyretin family FDQ49_10290 PF02683 Cytochrome C biogenesis protein transmembrane region FDQ49_10290 PF11412 Disulphide bond corrector protein DsbC FDQ49_10295 PF07694 5TMR of 5TMR-LYT FDQ49_10295 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_10300 PF07859 alpha/beta hydrolase fold FDQ49_10310 PF03960 ArsC family FDQ49_10315 PF03372 Endonuclease/Exonuclease/phosphatase family FDQ49_10320 PF00156 Phosphoribosyl transferase domain FDQ49_10325 PF07715 TonB-dependent Receptor Plug Domain FDQ49_10325 PF00593 TonB dependent receptor FDQ49_10335 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FDQ49_10335 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FDQ49_10345 PF04101 Glycosyltransferase family 28 C-terminal domain FDQ49_10345 PF03033 Glycosyltransferase family 28 N-terminal domain FDQ49_10350 PF08245 Mur ligase middle domain FDQ49_10350 PF02875 Mur ligase family, glutamate ligase domain FDQ49_10350 PF01225 Mur ligase family, catalytic domain FDQ49_10355 PF07478 D-ala D-ala ligase C-terminus FDQ49_10355 PF01820 D-ala D-ala ligase N-terminus FDQ49_10360 PF08478 POTRA domain, FtsQ-type FDQ49_10360 PF03799 Cell division protein FtsQ FDQ49_10365 PF02491 SHS2 domain inserted in FTSA FDQ49_10370 PF12327 FtsZ family, C-terminal domain FDQ49_10370 PF00091 Tubulin/FtsZ family, GTPase domain FDQ49_10375 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FDQ49_10385 PF01551 Peptidase family M23 FDQ49_10390 PF17831 Pyruvate dehydrogenase E1 component middle domain FDQ49_10390 PF00456 Transketolase, thiamine diphosphate binding domain FDQ49_10395 PF02817 e3 binding domain FDQ49_10395 PF00364 Biotin-requiring enzyme FDQ49_10395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDQ49_10405 PF01169 Uncharacterized protein family UPF0016 FDQ49_10410 PF01613 Flavin reductase like domain FDQ49_10410 PF00258 Flavodoxin FDQ49_10415 PF03692 Putative zinc- or iron-chelating domain FDQ49_10420 PF00571 CBS domain FDQ49_10420 PF00478 IMP dehydrogenase / GMP reductase domain FDQ49_10425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDQ49_10425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDQ49_10425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDQ49_10425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDQ49_10430 PF01243 Pyridoxamine 5'-phosphate oxidase FDQ49_10430 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FDQ49_10435 PF02272 DHHA1 domain FDQ49_10435 PF01368 DHH family FDQ49_10435 PF17768 RecJ OB domain FDQ49_10455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDQ49_10460 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FDQ49_10465 PF04452 RNA methyltransferase FDQ49_10470 PF05552 Conserved TM helix FDQ49_10470 PF00924 Mechanosensitive ion channel FDQ49_10480 PF13193 AMP-binding enzyme C-terminal domain FDQ49_10480 PF00501 AMP-binding enzyme FDQ49_10480 PF16177 Acetyl-coenzyme A synthetase N-terminus FDQ49_10485 PF00857 Isochorismatase family FDQ49_10490 PF01037 Lrp/AsnC ligand binding domain FDQ49_10495 PF00296 Luciferase-like monooxygenase FDQ49_10500 PF03358 NADPH-dependent FMN reductase FDQ49_10505 PF00196 Bacterial regulatory proteins, luxR family FDQ49_10505 PF00072 Response regulator receiver domain FDQ49_10515 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_10515 PF01627 Hpt domain FDQ49_10515 PF00672 HAMP domain FDQ49_10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_10515 PF00072 Response regulator receiver domain FDQ49_10520 PF04341 Protein of unknown function, DUF485 FDQ49_10525 PF00474 Sodium:solute symporter family FDQ49_10535 PF02028 BCCT, betaine/carnitine/choline family transporter FDQ49_10545 PF17158 Membrane-associated sensor, integral membrane domain FDQ49_10545 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_10550 PF17760 UvrA interaction domain FDQ49_10550 PF17755 UvrA DNA-binding domain FDQ49_10555 PF00440 Bacterial regulatory proteins, tetR family FDQ49_10555 PF16925 Tetracyclin repressor-like, C-terminal domain FDQ49_10560 PF00107 Zinc-binding dehydrogenase FDQ49_10560 PF08240 Alcohol dehydrogenase GroES-like domain FDQ49_10570 PF06942 GlpM protein FDQ49_10575 PF08543 Phosphomethylpyrimidine kinase FDQ49_10575 PF03070 TENA/THI-4/PQQC family FDQ49_10575 PF02581 Thiamine monophosphate synthase FDQ49_10585 PF07690 Major Facilitator Superfamily FDQ49_10590 PF00436 Single-strand binding protein family FDQ49_10600 PF03591 AzlC protein FDQ49_10610 PF00324 Amino acid permease FDQ49_10615 PF00392 Bacterial regulatory proteins, gntR family FDQ49_10615 PF00155 Aminotransferase class I and II FDQ49_10620 PF00202 Aminotransferase class-III FDQ49_10625 PF00171 Aldehyde dehydrogenase family FDQ49_10630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_10635 PF00857 Isochorismatase family FDQ49_10640 PF05726 Pirin C-terminal cupin domain FDQ49_10640 PF02678 Pirin FDQ49_10645 PF01593 Flavin containing amine oxidoreductase FDQ49_10670 PF07690 Major Facilitator Superfamily FDQ49_10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_10675 PF03466 LysR substrate binding domain FDQ49_10695 PF00248 Aldo/keto reductase family FDQ49_10700 PF02311 AraC-like ligand binding domain FDQ49_10700 PF12833 Helix-turn-helix domain FDQ49_10720 PF01638 HxlR-like helix-turn-helix FDQ49_10725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDQ49_10740 PF01638 HxlR-like helix-turn-helix FDQ49_10745 PF02525 Flavodoxin-like fold FDQ49_10765 PF02705 K+ potassium transporter FDQ49_10795 PF00230 Major intrinsic protein FDQ49_10810 PF00977 Histidine biosynthesis protein FDQ49_10815 PF01636 Phosphotransferase enzyme family FDQ49_10840 PF00977 Histidine biosynthesis protein FDQ49_10855 PF00117 Glutamine amidotransferase class-I FDQ49_10860 PF00475 Imidazoleglycerol-phosphate dehydratase FDQ49_10880 PF00583 Acetyltransferase (GNAT) family FDQ49_10885 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FDQ49_10885 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FDQ49_10895 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_10895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_10895 PF00672 HAMP domain FDQ49_10900 PF00072 Response regulator receiver domain FDQ49_10900 PF00486 Transcriptional regulatory protein, C terminal FDQ49_10905 PF17674 HHH domain FDQ49_10905 PF00575 S1 RNA binding domain FDQ49_10905 PF09371 Tex-like protein N-terminal domain FDQ49_10905 PF16921 Tex protein YqgF-like domain FDQ49_10910 PF01740 STAS domain FDQ49_10910 PF00916 Sulfate permease family FDQ49_10915 PF00106 short chain dehydrogenase FDQ49_10920 PF01053 Cys/Met metabolism PLP-dependent enzyme FDQ49_10925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDQ49_10925 PF00205 Thiamine pyrophosphate enzyme, central domain FDQ49_10925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDQ49_10930 PF00005 ABC transporter FDQ49_10930 PF12848 ABC transporter FDQ49_10955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDQ49_10955 PF00529 HlyD membrane-fusion protein of T1SS FDQ49_10960 PF00873 AcrB/AcrD/AcrF family FDQ49_10965 PF01545 Cation efflux family FDQ49_10995 PF00324 Amino acid permease FDQ49_11010 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDQ49_11025 PF01795 MraW methylase family FDQ49_11035 PF03717 Penicillin-binding Protein dimerisation domain FDQ49_11035 PF00905 Penicillin binding protein transpeptidase domain FDQ49_11040 PF02875 Mur ligase family, glutamate ligase domain FDQ49_11040 PF01225 Mur ligase family, catalytic domain FDQ49_11040 PF08245 Mur ligase middle domain FDQ49_11045 PF01225 Mur ligase family, catalytic domain FDQ49_11045 PF08245 Mur ligase middle domain FDQ49_11045 PF02875 Mur ligase family, glutamate ligase domain FDQ49_11050 PF00953 Glycosyl transferase family 4 FDQ49_11060 PF13847 Methyltransferase domain FDQ49_11065 PF00905 Penicillin binding protein transpeptidase domain FDQ49_11065 PF00912 Transglycosylase FDQ49_11065 PF17092 Penicillin-binding protein OB-like domain FDQ49_11090 PF00263 Bacterial type II and III secretion system protein FDQ49_11090 PF11741 AMIN domain FDQ49_11090 PF07660 Secretin and TonB N terminus short domain FDQ49_11090 PF03958 Bacterial type II/III secretion system short domain FDQ49_11095 PF01202 Shikimate kinase FDQ49_11100 PF01761 3-dehydroquinate synthase FDQ49_11110 PF01493 GXGXG motif FDQ49_11110 PF01645 Conserved region in glutamate synthase FDQ49_11110 PF04898 Glutamate synthase central domain FDQ49_11110 PF00310 Glutamine amidotransferases class-II FDQ49_11115 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDQ49_11115 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_11125 PF04011 LemA family FDQ49_11130 PF04536 TPM domain FDQ49_11140 PF00114 Pilin (bacterial filament) FDQ49_11140 PF07963 Prokaryotic N-terminal methylation motif FDQ49_11150 PF15864 Protein glycosylation ligase FDQ49_11150 PF11846 Virulence factor membrane-bound polymerase, C-terminal FDQ49_11150 PF04932 O-Antigen ligase FDQ49_11155 PF00210 Ferritin-like domain FDQ49_11160 PF04324 BFD-like [2Fe-2S] binding domain FDQ49_11165 PF01042 Endoribonuclease L-PSP FDQ49_11170 PF13291 ACT domain FDQ49_11170 PF04607 Region found in RelA / SpoT proteins FDQ49_11170 PF02824 TGS domain FDQ49_11180 PF01192 RNA polymerase Rpb6 FDQ49_11185 PF00625 Guanylate kinase FDQ49_11190 PF02401 LytB protein FDQ49_11225 PF07963 Prokaryotic N-terminal methylation motif FDQ49_11225 PF00114 Pilin (bacterial filament) FDQ49_11230 PF00886 Ribosomal protein S16 FDQ49_11235 PF05239 PRC-barrel domain FDQ49_11235 PF01782 RimM N-terminal domain FDQ49_11240 PF01746 tRNA (Guanine-1)-methyltransferase FDQ49_11245 PF01245 Ribosomal protein L19 FDQ49_11250 PF00561 alpha/beta hydrolase fold FDQ49_11255 PF03280 Proteobacterial lipase chaperone protein FDQ49_11260 PF16198 tRNA pseudouridylate synthase B C-terminal domain FDQ49_11260 PF09157 Pseudouridine synthase II TruB, C-terminal FDQ49_11260 PF01509 TruB family pseudouridylate synthase (N terminal domain) FDQ49_11265 PF01925 Sulfite exporter TauE/SafE FDQ49_11275 PF00892 EamA-like transporter family FDQ49_11280 PF00892 EamA-like transporter family FDQ49_11285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDQ49_11285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDQ49_11290 PF02913 FAD linked oxidases, C-terminal domain FDQ49_11290 PF01565 FAD binding domain FDQ49_11305 PF03992 Antibiotic biosynthesis monooxygenase FDQ49_11310 PF02525 Flavodoxin-like fold FDQ49_11320 PF07690 Major Facilitator Superfamily FDQ49_11325 PF12805 FUSC-like inner membrane protein yccS FDQ49_11330 PF00080 Copper/zinc superoxide dismutase (SODC) FDQ49_11335 PF01594 AI-2E family transporter FDQ49_11340 PF13614 AAA domain FDQ49_11360 PF08241 Methyltransferase domain FDQ49_11370 PF00324 Amino acid permease FDQ49_11375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FDQ49_11375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FDQ49_11385 PF04958 Arginine N-succinyltransferase beta subunit FDQ49_11390 PF00171 Aldehyde dehydrogenase family FDQ49_11395 PF04996 Succinylarginine dihydrolase FDQ49_11400 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FDQ49_11430 PF03466 LysR substrate binding domain FDQ49_11430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_11435 PF00892 EamA-like transporter family FDQ49_11445 PF05746 DALR anticodon binding domain FDQ49_11445 PF02092 Glycyl-tRNA synthetase beta subunit FDQ49_11450 PF02091 Glycyl-tRNA synthetase alpha subunit FDQ49_11475 PF00571 CBS domain FDQ49_11480 PF04024 PspC domain FDQ49_11490 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_11490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_11490 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDQ49_11490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_11500 PF01488 Shikimate / quinate 5-dehydrogenase FDQ49_11500 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FDQ49_11500 PF08501 Shikimate dehydrogenase substrate binding domain FDQ49_11510 PF00925 GTP cyclohydrolase II FDQ49_11515 PF02780 Transketolase, C-terminal domain FDQ49_11515 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FDQ49_11515 PF02779 Transketolase, pyrimidine binding domain FDQ49_11520 PF00459 Inositol monophosphatase family FDQ49_11525 PF03880 DbpA RNA binding domain FDQ49_11525 PF12343 Cold shock protein DEAD box A FDQ49_11525 PF00271 Helicase conserved C-terminal domain FDQ49_11525 PF00270 DEAD/DEAH box helicase FDQ49_11530 PF00005 ABC transporter FDQ49_11535 PF02405 Permease MlaE FDQ49_11545 PF05494 MlaC protein FDQ49_11555 PF01544 CorA-like Mg2+ transporter protein FDQ49_11560 PF03641 Possible lysine decarboxylase FDQ49_11565 PF00293 NUDIX domain FDQ49_11570 PF00156 Phosphoribosyl transferase domain FDQ49_11575 PF00270 DEAD/DEAH box helicase FDQ49_11575 PF17191 RecG wedge domain FDQ49_11575 PF00271 Helicase conserved C-terminal domain FDQ49_11590 PF01553 Acyltransferase FDQ49_11600 PF00375 Sodium:dicarboxylate symporter family FDQ49_11610 PF01926 50S ribosome-binding GTPase FDQ49_11615 PF02082 Transcriptional regulator FDQ49_11620 PF00042 Globin FDQ49_11620 PF00175 Oxidoreductase NAD-binding domain FDQ49_11620 PF00970 Oxidoreductase FAD-binding domain FDQ49_11625 PF05872 Bacterial protein of unknown function (DUF853) FDQ49_11630 PF01053 Cys/Met metabolism PLP-dependent enzyme FDQ49_11635 PF00117 Glutamine amidotransferase class-I FDQ49_11640 PF00338 Ribosomal protein S10p/S20e FDQ49_11645 PF00297 Ribosomal protein L3 FDQ49_11650 PF00573 Ribosomal protein L4/L1 family FDQ49_11655 PF00276 Ribosomal protein L23 FDQ49_11660 PF03947 Ribosomal Proteins L2, C-terminal domain FDQ49_11660 PF00181 Ribosomal Proteins L2, RNA binding domain FDQ49_11665 PF00203 Ribosomal protein S19 FDQ49_11670 PF00237 Ribosomal protein L22p/L17e FDQ49_11675 PF07650 KH domain FDQ49_11675 PF00189 Ribosomal protein S3, C-terminal domain FDQ49_11680 PF00252 Ribosomal protein L16p/L10e FDQ49_11685 PF00831 Ribosomal L29 protein FDQ49_11690 PF00366 Ribosomal protein S17 FDQ49_11695 PF00238 Ribosomal protein L14p/L23e FDQ49_11700 PF00467 KOW motif FDQ49_11700 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FDQ49_11705 PF00281 Ribosomal protein L5 FDQ49_11705 PF00673 ribosomal L5P family C-terminus FDQ49_11710 PF00253 Ribosomal protein S14p/S29e FDQ49_11715 PF00410 Ribosomal protein S8 FDQ49_11720 PF00347 Ribosomal protein L6 FDQ49_11725 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FDQ49_11730 PF03719 Ribosomal protein S5, C-terminal domain FDQ49_11730 PF00333 Ribosomal protein S5, N-terminal domain FDQ49_11735 PF00327 Ribosomal protein L30p/L7e FDQ49_11740 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FDQ49_11745 PF00344 SecY translocase FDQ49_11750 PF00444 Ribosomal protein L36 FDQ49_11755 PF00416 Ribosomal protein S13/S18 FDQ49_11760 PF00411 Ribosomal protein S11 FDQ49_11765 PF00163 Ribosomal protein S4/S9 N-terminal domain FDQ49_11765 PF01479 S4 domain FDQ49_11770 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FDQ49_11770 PF01000 RNA polymerase Rpb3/RpoA insert domain FDQ49_11770 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FDQ49_11775 PF01196 Ribosomal protein L17 FDQ49_11780 PF00743 Flavin-binding monooxygenase-like FDQ49_11785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_11785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_11785 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_11790 PF03937 Flavinator of succinate dehydrogenase FDQ49_11820 PF09526 Probable metal-binding protein (DUF2387) FDQ49_11825 PF01432 Peptidase family M3 FDQ49_11830 PF00575 S1 RNA binding domain FDQ49_11830 PF17876 Cold shock domain FDQ49_11830 PF08461 Ribonuclease R winged-helix domain FDQ49_11830 PF08206 Ribonuclease B OB domain FDQ49_11830 PF00773 RNB domain FDQ49_11875 PF01557 Fumarylacetoacetate (FAA) hydrolase family FDQ49_11880 PF12833 Helix-turn-helix domain FDQ49_11885 PF00892 EamA-like transporter family FDQ49_11890 PF03631 Virulence factor BrkB FDQ49_11895 PF03358 NADPH-dependent FMN reductase FDQ49_11920 PF02130 Uncharacterized protein family UPF0054 FDQ49_11925 PF02562 PhoH-like protein FDQ49_11930 PF01938 TRAM domain FDQ49_11930 PF00919 Uncharacterized protein family UPF0004 FDQ49_11930 PF04055 Radical SAM superfamily FDQ49_11935 PF01464 Transglycosylase SLT domain FDQ49_11935 PF10145 Phage-related minor tail protein FDQ49_11935 PF01551 Peptidase family M23 FDQ49_11945 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FDQ49_11945 PF00056 lactate/malate dehydrogenase, NAD binding domain FDQ49_11965 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FDQ49_11970 PF01066 CDP-alcohol phosphatidyltransferase FDQ49_12020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_12020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_12020 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_12025 PF17932 Tetracyclin repressor-like, C-terminal domain FDQ49_12025 PF00440 Bacterial regulatory proteins, tetR family FDQ49_12040 PF01039 Carboxyl transferase domain FDQ49_12045 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_12045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_12045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_12055 PF00364 Biotin-requiring enzyme FDQ49_12055 PF02785 Biotin carboxylase C-terminal domain FDQ49_12055 PF00289 Biotin carboxylase, N-terminal domain FDQ49_12055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDQ49_12085 PF04386 Stringent starvation protein B FDQ49_12090 PF00043 Glutathione S-transferase, C-terminal domain FDQ49_12090 PF13417 Glutathione S-transferase, N-terminal domain FDQ49_12095 PF00380 Ribosomal protein S9/S16 FDQ49_12100 PF00572 Ribosomal protein L13 FDQ49_12105 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FDQ49_12110 PF00398 Ribosomal RNA adenine dimethylase FDQ49_12115 PF00149 Calcineurin-like phosphoesterase FDQ49_12135 PF16360 GTP-binding GTPase Middle Region FDQ49_12135 PF13167 GTP-binding GTPase N-terminal FDQ49_12135 PF01926 50S ribosome-binding GTPase FDQ49_12145 PF13091 PLD-like domain FDQ49_12150 PF00149 Calcineurin-like phosphoesterase FDQ49_12150 PF10518 TAT (twin-arginine translocation) pathway signal sequence FDQ49_12155 PF00691 OmpA family FDQ49_12155 PF01389 OmpA-like transmembrane domain FDQ49_12160 PF17152 Periplasmic sensor domain FDQ49_12160 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_12195 PF00403 Heavy-metal-associated domain FDQ49_12195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDQ49_12195 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_12205 PF04273 Putative phosphatase (DUF442) FDQ49_12205 PF00753 Metallo-beta-lactamase superfamily FDQ49_12210 PF00561 alpha/beta hydrolase fold FDQ49_12215 PF00085 Thioredoxin FDQ49_12220 PF03061 Thioesterase superfamily FDQ49_12235 PF04461 Protein of unknown function (DUF520) FDQ49_12245 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FDQ49_12245 PF01266 FAD dependent oxidoreductase FDQ49_12255 PF03795 YCII-related domain FDQ49_12260 PF04279 Intracellular septation protein A FDQ49_12265 PF02811 PHP domain FDQ49_12270 PF01062 Bestrophin, RFP-TM, chloride channel FDQ49_12275 PF04002 RadC-like JAB domain FDQ49_12280 PF02441 Flavoprotein FDQ49_12280 PF04127 DNA / pantothenate metabolism flavoprotein FDQ49_12285 PF07549 SecD/SecF GG Motif FDQ49_12285 PF02355 Protein export membrane protein FDQ49_12290 PF13721 SecD export protein N-terminal TM region FDQ49_12290 PF07549 SecD/SecF GG Motif FDQ49_12290 PF02355 Protein export membrane protein FDQ49_12295 PF02699 Preprotein translocase subunit FDQ49_12300 PF01702 Queuine tRNA-ribosyltransferase FDQ49_12315 PF02547 Queuosine biosynthesis protein FDQ49_12335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_12335 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_12335 PF00072 Response regulator receiver domain FDQ49_12335 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDQ49_12340 PF03710 Glutamate-ammonia ligase adenylyltransferase FDQ49_12340 PF08335 GlnD PII-uridylyltransferase FDQ49_12345 PF01063 Amino-transferase class IV FDQ49_12355 PF00884 Sulfatase FDQ49_12365 PF01522 Polysaccharide deacetylase FDQ49_12370 PF00535 Glycosyl transferase family 2 FDQ49_12375 PF13439 Glycosyltransferase Family 4 FDQ49_12375 PF00534 Glycosyl transferases group 1 FDQ49_12405 PF17103 Stealth protein CR4, conserved region 4 FDQ49_12405 PF11380 Stealth protein CR2, conserved region 2 FDQ49_12405 PF17101 Stealth protein CR1, conserved region 1 FDQ49_12410 PF01336 OB-fold nucleic acid binding domain FDQ49_12410 PF02938 GAD domain FDQ49_12410 PF00152 tRNA synthetases class II (D, K and N) FDQ49_12420 PF07715 TonB-dependent Receptor Plug Domain FDQ49_12420 PF00593 TonB dependent receptor FDQ49_12440 PF06146 Phosphate-starvation-inducible E FDQ49_12445 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDQ49_12445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_12445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_12445 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_12450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_12450 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_12450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_12450 PF12806 Acetyl-CoA dehydrogenase C-terminal like FDQ49_12460 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_12460 PF00672 HAMP domain FDQ49_12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_12465 PF00072 Response regulator receiver domain FDQ49_12465 PF00486 Transcriptional regulatory protein, C terminal FDQ49_12470 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FDQ49_12490 PF01923 Cobalamin adenosyltransferase FDQ49_12495 PF07715 TonB-dependent Receptor Plug Domain FDQ49_12495 PF00593 TonB dependent receptor FDQ49_12500 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FDQ49_12505 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_12535 PF00290 Tryptophan synthase alpha chain FDQ49_12540 PF01039 Carboxyl transferase domain FDQ49_12545 PF08245 Mur ligase middle domain FDQ49_12545 PF02875 Mur ligase family, glutamate ligase domain FDQ49_12560 PF00753 Metallo-beta-lactamase superfamily FDQ49_12565 PF00578 AhpC/TSA family FDQ49_12565 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDQ49_12570 PF02810 SEC-C motif FDQ49_12570 PF07517 SecA DEAD-like domain FDQ49_12570 PF01043 SecA preprotein cross-linking domain FDQ49_12570 PF07516 SecA Wing and Scaffold domain FDQ49_12580 PF07690 Major Facilitator Superfamily FDQ49_12580 PF00083 Sugar (and other) transporter FDQ49_12585 PF03006 Haemolysin-III related FDQ49_12595 PF13673 Acetyltransferase (GNAT) domain FDQ49_12610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDQ49_12610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDQ49_12610 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_12615 PF02803 Thiolase, C-terminal domain FDQ49_12615 PF00108 Thiolase, N-terminal domain FDQ49_12620 PF12833 Helix-turn-helix domain FDQ49_12620 PF02311 AraC-like ligand binding domain FDQ49_12625 PF02515 CoA-transferase family III FDQ49_12630 PF04966 Carbohydrate-selective porin, OprB family FDQ49_12635 PF01011 PQQ enzyme repeat FDQ49_12640 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDQ49_12640 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDQ49_12650 PF00893 Small Multidrug Resistance protein FDQ49_12660 PF00108 Thiolase, N-terminal domain FDQ49_12660 PF02803 Thiolase, C-terminal domain FDQ49_12670 PF00691 OmpA family FDQ49_12670 PF13505 Outer membrane protein beta-barrel domain FDQ49_12675 PF01139 tRNA-splicing ligase RtcB FDQ49_12680 PF00324 Amino acid permease FDQ49_12685 PF05175 Methyltransferase small domain FDQ49_12685 PF08468 Methyltransferase small domain N-terminal FDQ49_12690 PF00860 Permease family FDQ49_12700 PF01741 Large-conductance mechanosensitive channel, MscL FDQ49_12715 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FDQ49_12715 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FDQ49_12715 PF06827 Zinc finger found in FPG and IleRS FDQ49_12720 PF02245 Methylpurine-DNA glycosylase (MPG) FDQ49_12725 PF00593 TonB dependent receptor FDQ49_12725 PF07715 TonB-dependent Receptor Plug Domain FDQ49_12730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDQ49_12735 PF03547 Membrane transport protein FDQ49_12745 PF13098 Thioredoxin-like domain FDQ49_12745 PF10411 Disulfide bond isomerase protein N-terminus FDQ49_12750 PF01571 Aminomethyltransferase folate-binding domain FDQ49_12760 PF04343 Protein of unknown function, DUF488 FDQ49_12765 PF03831 PhnA domain FDQ49_12765 PF08274 PhnA Zinc-Ribbon FDQ49_12770 PF07411 Domain of unknown function (DUF1508) FDQ49_12775 PF04073 Aminoacyl-tRNA editing domain FDQ49_12775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDQ49_12775 PF03129 Anticodon binding domain FDQ49_12780 PF00873 AcrB/AcrD/AcrF family FDQ49_12795 PF00072 Response regulator receiver domain FDQ49_12800 PF00072 Response regulator receiver domain FDQ49_12805 PF01584 CheW-like domain FDQ49_12810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDQ49_12810 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FDQ49_12815 PF01627 Hpt domain FDQ49_12815 PF01584 CheW-like domain FDQ49_12815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_12815 PF00072 Response regulator receiver domain FDQ49_12830 PF01546 Peptidase family M20/M25/M40 FDQ49_12830 PF07687 Peptidase dimerisation domain FDQ49_12845 PF04304 Protein of unknown function (DUF454) FDQ49_12850 PF17969 L,D-transpeptidase C-terminal domain FDQ49_12850 PF03734 L,D-transpeptidase catalytic domain FDQ49_12890 PF00258 Flavodoxin FDQ49_12890 PF00175 Oxidoreductase NAD-binding domain FDQ49_12890 PF00667 FAD binding domain FDQ49_12900 PF12805 FUSC-like inner membrane protein yccS FDQ49_12905 PF07690 Major Facilitator Superfamily FDQ49_12910 PF00881 Nitroreductase family FDQ49_12930 PF01235 Sodium:alanine symporter family FDQ49_12935 PF01734 Patatin-like phospholipase FDQ49_12940 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_12940 PF13291 ACT domain FDQ49_12945 PF05992 SbmA/BacA-like family FDQ49_12975 PF02637 GatB domain FDQ49_12975 PF02934 GatB/GatE catalytic domain FDQ49_12980 PF01425 Amidase FDQ49_12985 PF02686 Glu-tRNAGln amidotransferase C subunit FDQ49_12995 PF04085 rod shape-determining protein MreC FDQ49_13000 PF04093 rod shape-determining protein MreD FDQ49_13005 PF02545 Maf-like protein FDQ49_13010 PF10150 Ribonuclease E/G family FDQ49_13010 PF00575 S1 RNA binding domain FDQ49_13020 PF06974 Protein of unknown function (DUF1298) FDQ49_13020 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FDQ49_13025 PF01507 Phosphoadenosine phosphosulfate reductase family FDQ49_13040 PF02525 Flavodoxin-like fold FDQ49_13045 PF02311 AraC-like ligand binding domain FDQ49_13045 PF12833 Helix-turn-helix domain FDQ49_13060 PF02673 Bacitracin resistance protein BacA FDQ49_13065 PF12833 Helix-turn-helix domain FDQ49_13065 PF06719 AraC-type transcriptional regulator N-terminus FDQ49_13070 PF16197 Ketoacyl-synthetase C-terminal extension FDQ49_13070 PF09277 Erythronolide synthase, docking FDQ49_13070 PF14765 Polyketide synthase dehydratase FDQ49_13070 PF02801 Beta-ketoacyl synthase, C-terminal domain FDQ49_13070 PF08990 Erythronolide synthase docking FDQ49_13070 PF00109 Beta-ketoacyl synthase, N-terminal domain FDQ49_13070 PF00550 Phosphopantetheine attachment site FDQ49_13070 PF08659 KR domain FDQ49_13070 PF08240 Alcohol dehydrogenase GroES-like domain FDQ49_13070 PF00698 Acyl transferase domain FDQ49_13075 PF01965 DJ-1/PfpI family FDQ49_13095 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FDQ49_13100 PF09297 NADH pyrophosphatase zinc ribbon domain FDQ49_13100 PF00293 NUDIX domain FDQ49_13105 PF00324 Amino acid permease FDQ49_13110 PF04303 PrpF protein FDQ49_13115 PF00348 Polyprenyl synthetase FDQ49_13120 PF04237 YjbR FDQ49_13125 PF01145 SPFH domain / Band 7 family FDQ49_13135 PF01734 Patatin-like phospholipase FDQ49_13155 PF08019 Phosphoethanolamine transferase EptA/EptB FDQ49_13155 PF00884 Sulfatase FDQ49_13160 PF00072 Response regulator receiver domain FDQ49_13160 PF00486 Transcriptional regulatory protein, C terminal FDQ49_13165 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_13165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_13165 PF08521 Two-component sensor kinase N-terminal FDQ49_13175 PF00909 Ammonium Transporter Family FDQ49_13185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_13185 PF03466 LysR substrate binding domain FDQ49_13205 PF08264 Anticodon-binding domain of tRNA FDQ49_13205 PF10458 Valyl tRNA synthetase tRNA binding arm FDQ49_13205 PF00133 tRNA synthetases class I (I, L, M and V) FDQ49_13225 PF01906 Putative heavy-metal-binding FDQ49_13230 PF01906 Putative heavy-metal-binding FDQ49_13235 PF02321 Outer membrane efflux protein FDQ49_13240 PF00873 AcrB/AcrD/AcrF family FDQ49_13245 PF00529 HlyD membrane-fusion protein of T1SS FDQ49_13245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDQ49_13250 PF01569 PAP2 superfamily FDQ49_13260 PF00348 Polyprenyl synthetase FDQ49_13270 PF00829 Ribosomal prokaryotic L21 protein FDQ49_13275 PF01016 Ribosomal L27 protein FDQ49_13280 PF03548 Outer membrane lipoprotein carrier protein LolA FDQ49_13290 PF02403 Seryl-tRNA synthetase N-terminal domain FDQ49_13290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDQ49_13295 PF10414 Sirohaem synthase dimerisation region FDQ49_13295 PF14824 Sirohaem biosynthesis protein central FDQ49_13295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDQ49_13300 PF00588 SpoU rRNA Methylase family FDQ49_13305 PF01638 HxlR-like helix-turn-helix FDQ49_13310 PF03358 NADPH-dependent FMN reductase FDQ49_13315 PF13520 Amino acid permease FDQ49_13320 PF00465 Iron-containing alcohol dehydrogenase FDQ49_13330 PF03099 Biotin/lipoate A/B protein ligase family FDQ49_13335 PF04359 Protein of unknown function (DUF493) FDQ49_13340 PF03979 Sigma-70 factor, region 1.1 FDQ49_13340 PF04539 Sigma-70 region 3 FDQ49_13340 PF04546 Sigma-70, non-essential region FDQ49_13340 PF04545 Sigma-70, region 4 FDQ49_13340 PF04542 Sigma-70 region 2 FDQ49_13340 PF00140 Sigma-70 factor, region 1.2 FDQ49_13365 PF00285 Citrate synthase, C-terminal domain FDQ49_13370 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDQ49_13375 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDQ49_13380 PF00890 FAD binding domain FDQ49_13380 PF02910 Fumarate reductase flavoprotein C-term FDQ49_13385 PF13085 2Fe-2S iron-sulfur cluster binding domain FDQ49_13400 PF16078 2-oxoglutarate dehydrogenase N-terminus FDQ49_13400 PF00676 Dehydrogenase E1 component FDQ49_13400 PF02779 Transketolase, pyrimidine binding domain FDQ49_13400 PF16870 2-oxoglutarate dehydrogenase C-terminal FDQ49_13405 PF00364 Biotin-requiring enzyme FDQ49_13405 PF02817 e3 binding domain FDQ49_13405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDQ49_13410 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_13410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDQ49_13415 PF08442 ATP-grasp domain FDQ49_13415 PF00549 CoA-ligase FDQ49_13420 PF00549 CoA-ligase FDQ49_13420 PF02629 CoA binding domain FDQ49_13425 PF00579 tRNA synthetases class I (W and Y) FDQ49_13430 PF05661 Protein of unknown function (DUF808) FDQ49_13435 PF04228 Putative neutral zinc metallopeptidase FDQ49_13440 PF00999 Sodium/hydrogen exchanger family FDQ49_13455 PF09587 Bacterial capsule synthesis protein PGA_cap FDQ49_13465 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDQ49_13475 PF00582 Universal stress protein family FDQ49_13480 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_13485 PF01042 Endoribonuclease L-PSP FDQ49_13490 PF00440 Bacterial regulatory proteins, tetR family FDQ49_13495 PF01272 Transcription elongation factor, GreA/GreB, C-term FDQ49_13495 PF03449 Transcription elongation factor, N-terminal FDQ49_13500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FDQ49_13500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDQ49_13500 PF02142 MGS-like domain FDQ49_13505 PF00117 Glutamine amidotransferase class-I FDQ49_13505 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FDQ49_13525 PF01985 CRS1 / YhbY (CRM) domain FDQ49_13530 PF01728 FtsJ-like methyltransferase FDQ49_13535 PF17862 AAA+ lid domain FDQ49_13535 PF06480 FtsH Extracellular FDQ49_13535 PF01434 Peptidase family M41 FDQ49_13535 PF00004 ATPase family associated with various cellular activities (AAA) FDQ49_13540 PF00809 Pterin binding enzyme FDQ49_13560 PF09423 PhoD-like phosphatase FDQ49_13560 PF16655 PhoD-like phosphatase, N-terminal domain FDQ49_13575 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FDQ49_13575 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FDQ49_13590 PF00083 Sugar (and other) transporter FDQ49_13595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FDQ49_13595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDQ49_13600 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FDQ49_13600 PF01266 FAD dependent oxidoreductase FDQ49_13605 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain FDQ49_13605 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain FDQ49_13610 PF00781 Diacylglycerol kinase catalytic domain FDQ49_13615 PF00149 Calcineurin-like phosphoesterase FDQ49_13620 PF00166 Chaperonin 10 Kd subunit FDQ49_13625 PF00118 TCP-1/cpn60 chaperonin family FDQ49_13630 PF01219 Prokaryotic diacylglycerol kinase FDQ49_13635 PF00753 Metallo-beta-lactamase superfamily FDQ49_13640 PF03009 Glycerophosphoryl diester phosphodiesterase family FDQ49_13645 PF00873 AcrB/AcrD/AcrF family FDQ49_13655 PF01435 Peptidase family M48 FDQ49_13660 PF01464 Transglycosylase SLT domain FDQ49_13670 PF01171 PP-loop family FDQ49_13680 PF01464 Transglycosylase SLT domain FDQ49_13680 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDQ49_13685 PF03449 Transcription elongation factor, N-terminal FDQ49_13685 PF01272 Transcription elongation factor, GreA/GreB, C-term FDQ49_13700 PF00668 Condensation domain FDQ49_13700 PF00550 Phosphopantetheine attachment site FDQ49_13700 PF00975 Thioesterase domain FDQ49_13700 PF00501 AMP-binding enzyme FDQ49_13700 PF13193 AMP-binding enzyme C-terminal domain FDQ49_13730 PF00440 Bacterial regulatory proteins, tetR family FDQ49_13735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDQ49_13740 PF00364 Biotin-requiring enzyme FDQ49_13740 PF00561 alpha/beta hydrolase fold FDQ49_13745 PF00561 alpha/beta hydrolase fold FDQ49_13755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDQ49_13755 PF00529 HlyD membrane-fusion protein of T1SS FDQ49_13760 PF00873 AcrB/AcrD/AcrF family FDQ49_13765 PF00881 Nitroreductase family FDQ49_13770 PF00106 short chain dehydrogenase FDQ49_13780 PF02595 Glycerate kinase family FDQ49_13785 PF00384 Molybdopterin oxidoreductase FDQ49_13790 PF02634 FdhD/NarQ family FDQ49_13795 PF06803 Protein of unknown function (DUF1232) FDQ49_13800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDQ49_13800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDQ49_13800 PF11890 Domain of unknown function (DUF3410) FDQ49_13805 PF00152 tRNA synthetases class II (D, K and N) FDQ49_13815 PF18073 Rubredoxin metal binding domain FDQ49_13820 PF00324 Amino acid permease FDQ49_13825 PF00324 Amino acid permease FDQ49_13835 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDQ49_13835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDQ49_13840 PF01678 Diaminopimelate epimerase FDQ49_13845 PF00561 alpha/beta hydrolase fold FDQ49_13850 PF01810 LysE type translocator FDQ49_13855 PF02899 Phage integrase, N-terminal SAM-like domain FDQ49_13855 PF00589 Phage integrase family FDQ49_13860 PF01012 Electron transfer flavoprotein domain FDQ49_13865 PF00766 Electron transfer flavoprotein FAD-binding domain FDQ49_13865 PF01012 Electron transfer flavoprotein domain FDQ49_13875 PF16123 Hydroxyacylglutathione hydrolase C-terminus FDQ49_13875 PF00753 Metallo-beta-lactamase superfamily FDQ49_13880 PF00521 DNA gyrase/topoisomerase IV, subunit A FDQ49_13880 PF03989 DNA gyrase C-terminal domain, beta-propeller FDQ49_13885 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FDQ49_13895 PF00535 Glycosyl transferase family 2 FDQ49_13915 PF13533 Biotin-lipoyl like FDQ49_13925 PF00266 Aminotransferase class-V FDQ49_13935 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FDQ49_13945 PF02687 FtsX-like permease family FDQ49_13945 PF12704 MacB-like periplasmic core domain FDQ49_13950 PF00005 ABC transporter FDQ49_13955 PF00753 Metallo-beta-lactamase superfamily FDQ49_13955 PF03772 Competence protein FDQ49_13965 PF01343 Peptidase family S49 FDQ49_13965 PF06965 Na+/H+ antiporter 1 FDQ49_13970 PF12697 Alpha/beta hydrolase family FDQ49_13975 PF00551 Formyl transferase FDQ49_13980 PF02769 AIR synthase related protein, C-terminal domain FDQ49_13980 PF00586 AIR synthase related protein, N-terminal domain FDQ49_13985 PF01594 AI-2E family transporter FDQ49_13990 PF11638 DnaA N-terminal domain FDQ49_13990 PF08299 Bacterial dnaA protein helix-turn-helix FDQ49_13990 PF00308 Bacterial dnaA protein FDQ49_14020 PF00588 SpoU rRNA Methylase family FDQ49_14020 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDQ49_14025 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FDQ49_14035 PF00691 OmpA family FDQ49_14040 PF07676 WD40-like Beta Propeller Repeat FDQ49_14040 PF04052 TolB amino-terminal domain FDQ49_14050 PF02472 Biopolymer transport protein ExbD/TolR FDQ49_14055 PF01618 MotA/TolQ/ExbB proton channel family FDQ49_14060 PF03061 Thioesterase superfamily FDQ49_14065 PF01546 Peptidase family M20/M25/M40 FDQ49_14065 PF07687 Peptidase dimerisation domain FDQ49_14070 PF17864 RuvB AAA lid domain FDQ49_14070 PF05491 RuvB C-terminal winged helix domain FDQ49_14070 PF05496 Holliday junction DNA helicase RuvB P-loop domain FDQ49_14075 PF01330 RuvA N terminal domain FDQ49_14075 PF07499 RuvA, C-terminal domain FDQ49_14080 PF01966 HD domain FDQ49_14085 PF02769 AIR synthase related protein, C-terminal domain FDQ49_14085 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FDQ49_14085 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FDQ49_14090 PF07690 Major Facilitator Superfamily FDQ49_14105 PF01784 NIF3 (NGG1p interacting factor 3) FDQ49_14110 PF00378 Enoyl-CoA hydratase/isomerase FDQ49_14115 PF01467 Cytidylyltransferase-like FDQ49_14115 PF00293 NUDIX domain FDQ49_14130 PF00578 AhpC/TSA family FDQ49_14145 PF06508 Queuosine biosynthesis protein QueC FDQ49_14150 PF04055 Radical SAM superfamily FDQ49_14155 PF14602 Hexapeptide repeat of succinyl-transferase FDQ49_14155 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FDQ49_14155 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_14165 PF03466 LysR substrate binding domain FDQ49_14170 PF00005 ABC transporter FDQ49_14170 PF12857 TOBE-like domain FDQ49_14175 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_14180 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_14195 PF01063 Amino-transferase class IV FDQ49_14200 PF02618 YceG-like family FDQ49_14205 PF02223 Thymidylate kinase FDQ49_14215 PF02910 Fumarate reductase flavoprotein C-term FDQ49_14215 PF00890 FAD binding domain FDQ49_14220 PF13180 PDZ domain FDQ49_14235 PF06421 GTP-binding protein LepA C-terminus FDQ49_14235 PF00009 Elongation factor Tu GTP binding domain FDQ49_14235 PF00679 Elongation factor G C-terminus FDQ49_14235 PF03144 Elongation factor Tu domain 2 FDQ49_14240 PF10502 Signal peptidase, peptidase S26 FDQ49_14250 PF00035 Double-stranded RNA binding motif FDQ49_14250 PF14622 Ribonuclease-III-like FDQ49_14255 PF07650 KH domain FDQ49_14255 PF01926 50S ribosome-binding GTPase FDQ49_14265 PF11967 Recombination protein O N terminal FDQ49_14265 PF02565 Recombination protein O C terminal FDQ49_14270 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FDQ49_14275 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FDQ49_14280 PF00106 short chain dehydrogenase FDQ49_14320 PF17151 Periplasmic sensor domain FDQ49_14320 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_14330 PF02151 UvrB/uvrC motif FDQ49_14330 PF00271 Helicase conserved C-terminal domain FDQ49_14330 PF12344 Ultra-violet resistance protein B FDQ49_14330 PF17757 UvrB interaction domain FDQ49_14330 PF04851 Type III restriction enzyme, res subunit FDQ49_14345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDQ49_14345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDQ49_14360 PF01018 GTP1/OBG FDQ49_14360 PF01926 50S ribosome-binding GTPase FDQ49_14365 PF01472 PUA domain FDQ49_14365 PF00696 Amino acid kinase family FDQ49_14375 PF07759 Protein of unknown function (DUF1615) FDQ49_14380 PF01207 Dihydrouridine synthase (Dus) FDQ49_14385 PF03060 Nitronate monooxygenase FDQ49_14400 PF02350 UDP-N-acetylglucosamine 2-epimerase FDQ49_14430 PF03441 FAD binding domain of DNA photolyase FDQ49_14430 PF00875 DNA photolyase FDQ49_14435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDQ49_14440 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_14445 PF07943 Penicillin-binding protein 5, C-terminal domain FDQ49_14445 PF00768 D-alanyl-D-alanine carboxypeptidase FDQ49_14455 PF03971 Monomeric isocitrate dehydrogenase FDQ49_14460 PF00849 RNA pseudouridylate synthase FDQ49_14465 PF00180 Isocitrate/isopropylmalate dehydrogenase FDQ49_14485 PF06779 Uncharacterised MFS-type transporter YbfB FDQ49_14490 PF03466 LysR substrate binding domain FDQ49_14490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_14500 PF02567 Phenazine biosynthesis-like protein FDQ49_14505 PF05193 Peptidase M16 inactive domain FDQ49_14505 PF00675 Insulinase (Peptidase family M16) FDQ49_14530 PF02581 Thiamine monophosphate synthase FDQ49_14535 PF00202 Aminotransferase class-III FDQ49_14545 PF00849 RNA pseudouridylate synthase FDQ49_14550 PF18337 RapA N-terminal Tudor like domain FDQ49_14550 PF12137 RNA polymerase recycling family C-terminal FDQ49_14550 PF00176 SNF2 family N-terminal domain FDQ49_14550 PF18339 RapA N-terminal Tudor like domain 1 FDQ49_14550 PF00271 Helicase conserved C-terminal domain FDQ49_14560 PF00440 Bacterial regulatory proteins, tetR family FDQ49_14565 PF00970 Oxidoreductase FAD-binding domain FDQ49_14565 PF00111 2Fe-2S iron-sulfur cluster binding domain FDQ49_14565 PF00175 Oxidoreductase NAD-binding domain FDQ49_14570 PF00487 Fatty acid desaturase FDQ49_14590 PF00202 Aminotransferase class-III FDQ49_14595 PF00282 Pyridoxal-dependent decarboxylase conserved domain FDQ49_14600 PF00171 Aldehyde dehydrogenase family FDQ49_14605 PF01037 Lrp/AsnC ligand binding domain FDQ49_14610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDQ49_14610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDQ49_14610 PF00205 Thiamine pyrophosphate enzyme, central domain FDQ49_14615 PF00324 Amino acid permease FDQ49_14620 PF12849 PBP superfamily domain FDQ49_14625 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_14630 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_14635 PF00005 ABC transporter FDQ49_14640 PF08496 Peptidase family S49 N-terminal FDQ49_14640 PF01343 Peptidase family S49 FDQ49_14655 PF09997 Predicted membrane protein (DUF2238) FDQ49_14660 PF00206 Lyase FDQ49_14660 PF08328 Adenylosuccinate lyase C-terminal FDQ49_14665 PF04356 Protein of unknown function (DUF489) FDQ49_14675 PF00293 NUDIX domain FDQ49_14680 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_14685 PF07943 Penicillin-binding protein 5, C-terminal domain FDQ49_14685 PF00768 D-alanyl-D-alanine carboxypeptidase FDQ49_14700 PF01975 Survival protein SurE FDQ49_14705 PF01476 LysM domain FDQ49_14705 PF01551 Peptidase family M23 FDQ49_14710 PF03466 LysR substrate binding domain FDQ49_14710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_14715 PF13654 AAA domain FDQ49_14715 PF05362 Lon protease (S16) C-terminal proteolytic domain FDQ49_14720 PF07690 Major Facilitator Superfamily FDQ49_14725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDQ49_14730 PF13593 SBF-like CPA transporter family (DUF4137) FDQ49_14735 PF01197 Ribosomal protein L31 FDQ49_14740 PF12792 CSS motif domain associated with EAL FDQ49_14740 PF00563 EAL domain FDQ49_14750 PF04055 Radical SAM superfamily FDQ49_14755 PF09285 Elongation factor P, C-terminal FDQ49_14755 PF01132 Elongation factor P (EF-P) OB domain FDQ49_14755 PF08207 Elongation factor P (EF-P) KOW-like domain FDQ49_14760 PF13722 5TM C-terminal transporter carbon starvation CstA FDQ49_14760 PF02554 Carbon starvation protein CstA FDQ49_14765 PF04328 Selenoprotein, putative FDQ49_14800 PF07690 Major Facilitator Superfamily FDQ49_14810 PF02417 Chromate transporter FDQ49_14815 PF09828 Chromate resistance exported protein FDQ49_14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_14820 PF03466 LysR substrate binding domain FDQ49_14845 PF02423 Ornithine cyclodeaminase/mu-crystallin family FDQ49_14850 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_14855 PF13309 HTH domain FDQ49_14855 PF08348 YheO-like PAS domain FDQ49_14860 PF17954 Quercetinase C-terminal cupin domain FDQ49_14860 PF02678 Pirin FDQ49_14875 PF01208 Uroporphyrinogen decarboxylase (URO-D) FDQ49_14880 PF05675 Protein of unknown function (DUF817) FDQ49_14895 PF00144 Beta-lactamase FDQ49_14905 PF00111 2Fe-2S iron-sulfur cluster binding domain FDQ49_14905 PF01799 [2Fe-2S] binding domain FDQ49_14910 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FDQ49_14910 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FDQ49_14920 PF01713 Smr domain FDQ49_14925 PF00218 Indole-3-glycerol phosphate synthase FDQ49_14930 PF02885 Glycosyl transferase family, helical bundle domain FDQ49_14930 PF00591 Glycosyl transferase family, a/b domain FDQ49_14935 PF00593 TonB dependent receptor FDQ49_14935 PF07715 TonB-dependent Receptor Plug Domain FDQ49_14940 PF01433 Peptidase family M1 domain FDQ49_14940 PF11838 ERAP1-like C-terminal domain FDQ49_14945 PF00117 Glutamine amidotransferase class-I FDQ49_14955 PF00854 POT family FDQ49_14965 PF04345 Chorismate lyase FDQ49_14970 PF01040 UbiA prenyltransferase family FDQ49_15005 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FDQ49_15005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FDQ49_15010 PF01784 NIF3 (NGG1p interacting factor 3) FDQ49_15015 PF13180 PDZ domain FDQ49_15020 PF01743 Poly A polymerase head domain FDQ49_15020 PF12627 Probable RNA and SrmB- binding site of polymerase A FDQ49_15025 PF03949 Malic enzyme, NAD binding domain FDQ49_15025 PF00390 Malic enzyme, N-terminal domain FDQ49_15025 PF01515 Phosphate acetyl/butaryl transferase FDQ49_15030 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_15030 PF00563 EAL domain FDQ49_15030 PF03707 Bacterial signalling protein N terminal repeat FDQ49_15035 PF04452 RNA methyltransferase FDQ49_15040 PF02219 Methylenetetrahydrofolate reductase FDQ49_15045 PF05221 S-adenosyl-L-homocysteine hydrolase FDQ49_15045 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FDQ49_15060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_15060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_15060 PF09317 Domain of unknown function (DUF1974) FDQ49_15065 PF04055 Radical SAM superfamily FDQ49_15070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDQ49_15070 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_15080 PF07690 Major Facilitator Superfamily FDQ49_15090 PF00557 Metallopeptidase family M24 FDQ49_15095 PF00318 Ribosomal protein S2 FDQ49_15100 PF00889 Elongation factor TS FDQ49_15110 PF12833 Helix-turn-helix domain FDQ49_15130 PF05036 Sporulation related domain FDQ49_15130 PF03330 Lytic transglycolase FDQ49_15135 PF13406 Transglycosylase SLT domain FDQ49_15140 PF01098 Cell cycle protein FDQ49_15150 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FDQ49_15150 PF14489 QueF-like protein FDQ49_15155 PF01061 ABC-2 type transporter FDQ49_15160 PF00005 ABC transporter FDQ49_15185 PF00464 Serine hydroxymethyltransferase FDQ49_15190 PF02321 Outer membrane efflux protein FDQ49_15195 PF00873 AcrB/AcrD/AcrF family FDQ49_15200 PF13533 Biotin-lipoyl like FDQ49_15205 PF03466 LysR substrate binding domain FDQ49_15205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_15210 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDQ49_15215 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_15220 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_15225 PF00005 ABC transporter FDQ49_15230 PF00893 Small Multidrug Resistance protein FDQ49_15235 PF12838 4Fe-4S dicluster domain FDQ49_15245 PF00155 Aminotransferase class I and II FDQ49_15245 PF00392 Bacterial regulatory proteins, gntR family FDQ49_15250 PF02567 Phenazine biosynthesis-like protein FDQ49_15255 PF00175 Oxidoreductase NAD-binding domain FDQ49_15255 PF00970 Oxidoreductase FAD-binding domain FDQ49_15260 PF01980 tRNA-methyltransferase O FDQ49_15260 PF18389 TrmO C-terminal domain FDQ49_15270 PF00437 Type II/IV secretion system protein FDQ49_15280 PF00072 Response regulator receiver domain FDQ49_15280 PF00486 Transcriptional regulatory protein, C terminal FDQ49_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_15285 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_15285 PF08521 Two-component sensor kinase N-terminal FDQ49_15295 PF00293 NUDIX domain FDQ49_15305 PF00905 Penicillin binding protein transpeptidase domain FDQ49_15305 PF00912 Transglycosylase FDQ49_15305 PF14814 Bifunctional transglycosylase second domain FDQ49_15310 PF01513 ATP-NAD kinase FDQ49_15315 PF07023 Protein of unknown function (DUF1315) FDQ49_15320 PF00591 Glycosyl transferase family, a/b domain FDQ49_15320 PF02885 Glycosyl transferase family, helical bundle domain FDQ49_15330 PF00375 Sodium:dicarboxylate symporter family FDQ49_15335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_15335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_15335 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_15345 PF00756 Putative esterase FDQ49_15350 PF01817 Chorismate mutase type II FDQ49_15350 PF01842 ACT domain FDQ49_15350 PF00800 Prephenate dehydratase FDQ49_15355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDQ49_15365 PF03781 Sulfatase-modifying factor enzyme 1 FDQ49_15370 PF01546 Peptidase family M20/M25/M40 FDQ49_15370 PF07687 Peptidase dimerisation domain FDQ49_15375 PF00753 Metallo-beta-lactamase superfamily FDQ49_15385 PF03883 Peroxide stress protein YaaA FDQ49_15395 PF05690 Thiazole biosynthesis protein ThiG FDQ49_15405 PF04241 Protein of unknown function (DUF423) FDQ49_15410 PF04545 Sigma-70, region 4 FDQ49_15410 PF04542 Sigma-70 region 2 FDQ49_15410 PF00140 Sigma-70 factor, region 1.2 FDQ49_15420 PF00313 'Cold-shock' DNA-binding domain FDQ49_15425 PF00271 Helicase conserved C-terminal domain FDQ49_15425 PF00270 DEAD/DEAH box helicase FDQ49_15435 PF00881 Nitroreductase family FDQ49_15440 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FDQ49_15440 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FDQ49_15460 PF01180 Dihydroorotate dehydrogenase FDQ49_15465 PF02674 Colicin V production protein FDQ49_15470 PF00156 Phosphoribosyl transferase domain FDQ49_15485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDQ49_15485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDQ49_15490 PF01435 Peptidase family M48 FDQ49_15495 PF09424 Yqey-like protein FDQ49_15500 PF01165 Ribosomal protein S21 FDQ49_15505 PF00814 Glycoprotease family FDQ49_15525 PF00069 Protein kinase domain FDQ49_15525 PF03793 PASTA domain FDQ49_15550 PF08479 POTRA domain, ShlB-type FDQ49_15550 PF17287 POTRA domain FDQ49_15550 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FDQ49_15565 PF12106 Colicin E5 ribonuclease domain FDQ49_15565 PF13332 Hemagglutinin repeat FDQ49_15580 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FDQ49_15625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_15625 PF03466 LysR substrate binding domain FDQ49_15630 PF00202 Aminotransferase class-III FDQ49_15635 PF00171 Aldehyde dehydrogenase family FDQ49_15640 PF00324 Amino acid permease FDQ49_15660 PF13649 Methyltransferase domain FDQ49_15670 PF04076 Bacterial OB fold (BOF) protein FDQ49_15685 PF00561 alpha/beta hydrolase fold FDQ49_15690 PF03616 Sodium/glutamate symporter FDQ49_15695 PF03466 LysR substrate binding domain FDQ49_15695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_15700 PF00248 Aldo/keto reductase family FDQ49_15705 PF00106 short chain dehydrogenase FDQ49_15715 PF02254 TrkA-N domain FDQ49_15715 PF00999 Sodium/hydrogen exchanger family FDQ49_15770 PF03279 Bacterial lipid A biosynthesis acyltransferase FDQ49_15830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDQ49_15830 PF12833 Helix-turn-helix domain FDQ49_15830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDQ49_15830 PF02805 Metal binding domain of Ada FDQ49_15840 PF00155 Aminotransferase class I and II FDQ49_15845 PF06826 Predicted Permease Membrane Region FDQ49_15845 PF02080 TrkA-C domain FDQ49_15860 PF03466 LysR substrate binding domain FDQ49_15860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_15870 PF04403 Paraquat-inducible protein A FDQ49_15875 PF02470 MlaD protein FDQ49_15885 PF00576 HIUase/Transthyretin family FDQ49_15895 PF00072 Response regulator receiver domain FDQ49_15895 PF00486 Transcriptional regulatory protein, C terminal FDQ49_15900 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_15900 PF00672 HAMP domain FDQ49_15940 PF08521 Two-component sensor kinase N-terminal FDQ49_15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_15940 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_15945 PF00486 Transcriptional regulatory protein, C terminal FDQ49_15945 PF00072 Response regulator receiver domain FDQ49_15960 PF00892 EamA-like transporter family FDQ49_15965 PF00107 Zinc-binding dehydrogenase FDQ49_15965 PF08240 Alcohol dehydrogenase GroES-like domain FDQ49_15970 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FDQ49_15975 PF05853 beta-keto acid cleavage enzyme FDQ49_15980 PF07690 Major Facilitator Superfamily FDQ49_15995 PF03601 Conserved hypothetical protein 698 FDQ49_16020 PF07995 Glucose / Sorbosone dehydrogenase FDQ49_16040 PF00375 Sodium:dicarboxylate symporter family FDQ49_16050 PF00753 Metallo-beta-lactamase superfamily FDQ49_16050 PF16123 Hydroxyacylglutathione hydrolase C-terminus FDQ49_16055 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_16060 PF00005 ABC transporter FDQ49_16060 PF09383 NIL domain FDQ49_16065 PF03180 NLPA lipoprotein FDQ49_16070 PF02844 Phosphoribosylglycinamide synthetase, N domain FDQ49_16070 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FDQ49_16070 PF02843 Phosphoribosylglycinamide synthetase, C domain FDQ49_16075 PF02142 MGS-like domain FDQ49_16075 PF01808 AICARFT/IMPCHase bienzyme FDQ49_16080 PF02954 Bacterial regulatory protein, Fis family FDQ49_16100 PF01134 Glucose inhibited division protein A FDQ49_16100 PF13932 GidA associated domain FDQ49_16110 PF14403 Circularly permuted ATP-grasp type 2 FDQ49_16120 PF01841 Transglutaminase-like superfamily FDQ49_16120 PF08379 Bacterial transglutaminase-like N-terminal region FDQ49_16130 PF01168 Alanine racemase, N-terminal domain FDQ49_16130 PF00842 Alanine racemase, C-terminal domain FDQ49_16135 PF00772 DnaB-like helicase N terminal domain FDQ49_16135 PF03796 DnaB-like helicase C terminal domain FDQ49_16140 PF03948 Ribosomal protein L9, C-terminal domain FDQ49_16140 PF01281 Ribosomal protein L9, N-terminal domain FDQ49_16145 PF01084 Ribosomal protein S18 FDQ49_16150 PF01250 Ribosomal protein S6 FDQ49_16155 PF01040 UbiA prenyltransferase family FDQ49_16160 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FDQ49_16165 PF00510 Cytochrome c oxidase subunit III FDQ49_16170 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDQ49_16175 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FDQ49_16175 PF06481 COX Aromatic Rich Motif FDQ49_16185 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FDQ49_16185 PF00391 PEP-utilising enzyme, mobile domain FDQ49_16185 PF02896 PEP-utilising enzyme, TIM barrel domain FDQ49_16190 PF03618 Kinase/pyrophosphorylase FDQ49_16200 PF14883 Hypothetical glycosyl hydrolase family 13 FDQ49_16200 PF01522 Polysaccharide deacetylase FDQ49_16205 PF00535 Glycosyl transferase family 2 FDQ49_16210 PF13994 PgaD-like protein FDQ49_16220 PF00296 Luciferase-like monooxygenase FDQ49_16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_16240 PF03466 LysR substrate binding domain FDQ49_16250 PF00472 RF-1 domain FDQ49_16250 PF03462 PCRF domain FDQ49_16255 PF17827 PrmC N-terminal domain FDQ49_16255 PF05175 Methyltransferase small domain FDQ49_16260 PF00528 Binding-protein-dependent transport system inner membrane component FDQ49_16265 PF09084 NMT1/THI5 like FDQ49_16270 PF12833 Helix-turn-helix domain FDQ49_16275 PF00106 short chain dehydrogenase FDQ49_16280 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_16280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_16280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_16285 PF13193 AMP-binding enzyme C-terminal domain FDQ49_16285 PF00501 AMP-binding enzyme FDQ49_16290 PF01613 Flavin reductase like domain FDQ49_16295 PF00899 ThiF family FDQ49_16300 PF03109 ABC1 family FDQ49_16315 PF03814 Potassium-transporting ATPase A subunit FDQ49_16325 PF02669 K+-transporting ATPase, c chain FDQ49_16330 PF13493 Domain of unknown function (DUF4118) FDQ49_16330 PF02702 Osmosensitive K+ channel His kinase sensor domain FDQ49_16330 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_16335 PF00486 Transcriptional regulatory protein, C terminal FDQ49_16335 PF00072 Response regulator receiver domain FDQ49_16340 PF00120 Glutamine synthetase, catalytic domain FDQ49_16350 PF03232 Ubiquinone biosynthesis protein COQ7 FDQ49_16355 PF07690 Major Facilitator Superfamily FDQ49_16360 PF01103 Surface antigen FDQ49_16360 PF07244 Surface antigen variable number repeat FDQ49_16360 PF17243 POTRA domain TamA domain 1 FDQ49_16380 PF00330 Aconitase family (aconitate hydratase) FDQ49_16380 PF06434 Aconitate hydratase 2 N-terminus FDQ49_16380 PF11791 Aconitate B N-terminal domain FDQ49_16390 PF00027 Cyclic nucleotide-binding domain FDQ49_16390 PF00520 Ion transport protein FDQ49_16395 PF07690 Major Facilitator Superfamily FDQ49_16405 PF03466 LysR substrate binding domain FDQ49_16405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_16410 PF04284 Protein of unknown function (DUF441) FDQ49_16420 PF01479 S4 domain FDQ49_16420 PF00849 RNA pseudouridylate synthase FDQ49_16435 PF00849 RNA pseudouridylate synthase FDQ49_16435 PF01479 S4 domain FDQ49_16440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FDQ49_16445 PF01119 DNA mismatch repair protein, C-terminal domain FDQ49_16445 PF08676 MutL C terminal dimerisation domain FDQ49_16455 PF17209 Hfq protein FDQ49_16465 PF00881 Nitroreductase family FDQ49_16475 PF00149 Calcineurin-like phosphoesterase FDQ49_16480 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDQ49_16485 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDQ49_16485 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FDQ49_16490 PF02540 NAD synthase FDQ49_16490 PF00958 GMP synthase C terminal domain FDQ49_16490 PF00117 Glutamine amidotransferase class-I FDQ49_16495 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FDQ49_16500 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FDQ49_16505 PF13520 Amino acid permease FDQ49_16510 PF00171 Aldehyde dehydrogenase family FDQ49_16525 PF00465 Iron-containing alcohol dehydrogenase FDQ49_16530 PF05970 PIF1-like helicase FDQ49_16530 PF14493 Helix-turn-helix domain FDQ49_16540 PF06445 GyrI-like small molecule binding domain FDQ49_16545 PF02110 Hydroxyethylthiazole kinase family FDQ49_16560 PF11940 Domain of unknown function (DUF3458) Ig-like fold FDQ49_16560 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FDQ49_16560 PF01433 Peptidase family M1 domain FDQ49_16575 PF13953 PapC C-terminal domain FDQ49_16575 PF13954 PapC N-terminal domain FDQ49_16575 PF00577 Outer membrane usher protein FDQ49_16590 PF02798 Glutathione S-transferase, N-terminal domain FDQ49_16605 PF01817 Chorismate mutase type II FDQ49_16610 PF01037 Lrp/AsnC ligand binding domain FDQ49_16635 PF07715 TonB-dependent Receptor Plug Domain FDQ49_16635 PF00593 TonB dependent receptor FDQ49_16640 PF03328 HpcH/HpaI aldolase/citrate lyase family FDQ49_16645 PF06276 Ferric iron reductase FhuF-like transporter FDQ49_16645 PF04183 IucA / IucC family FDQ49_16650 PF07690 Major Facilitator Superfamily FDQ49_16655 PF04183 IucA / IucC family FDQ49_16655 PF06276 Ferric iron reductase FhuF-like transporter FDQ49_16660 PF02423 Ornithine cyclodeaminase/mu-crystallin family FDQ49_16665 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_16670 PF00924 Mechanosensitive ion channel FDQ49_16715 PF12848 ABC transporter FDQ49_16715 PF00005 ABC transporter FDQ49_16715 PF16326 ABC transporter C-terminal domain FDQ49_16720 PF00582 Universal stress protein family FDQ49_16735 PF00689 Cation transporting ATPase, C-terminus FDQ49_16735 PF00690 Cation transporter/ATPase, N-terminus FDQ49_16740 PF02308 MgtC family FDQ49_16745 PF03594 Benzoate membrane transport protein FDQ49_16750 PF01037 Lrp/AsnC ligand binding domain FDQ49_16755 PF01810 LysE type translocator FDQ49_16760 PF13202 EF hand FDQ49_16760 PF00923 Transaldolase/Fructose-6-phosphate aldolase FDQ49_16765 PF03466 LysR substrate binding domain FDQ49_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_16775 PF02803 Thiolase, C-terminal domain FDQ49_16775 PF00108 Thiolase, N-terminal domain FDQ49_16800 PF07690 Major Facilitator Superfamily FDQ49_16815 PF12170 DNA polymerase III tau subunit V interacting with alpha FDQ49_16815 PF12169 DNA polymerase III subunits gamma and tau domain III FDQ49_16820 PF04185 Phosphoesterase family FDQ49_16820 PF05506 Domain of unknown function (DUF756) FDQ49_16825 PF03061 Thioesterase superfamily FDQ49_16830 PF00465 Iron-containing alcohol dehydrogenase FDQ49_16840 PF00857 Isochorismatase family FDQ49_16845 PF01638 HxlR-like helix-turn-helix FDQ49_16855 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDQ49_16860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FDQ49_16860 PF01565 FAD binding domain FDQ49_16885 PF01645 Conserved region in glutamate synthase FDQ49_16905 PF00577 Outer membrane usher protein FDQ49_16905 PF13954 PapC N-terminal domain FDQ49_16905 PF13953 PapC C-terminal domain FDQ49_16920 PF12832 MFS_1 like family FDQ49_16930 PF00289 Biotin carboxylase, N-terminal domain FDQ49_16930 PF02785 Biotin carboxylase C-terminal domain FDQ49_16930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDQ49_16935 PF00364 Biotin-requiring enzyme FDQ49_16940 PF01220 Dehydroquinase class II FDQ49_16945 PF13438 Domain of unknown function (DUF4113) FDQ49_16945 PF00817 impB/mucB/samB family FDQ49_16945 PF11799 impB/mucB/samB family C-terminal domain FDQ49_16950 PF00005 ABC transporter FDQ49_16955 PF00486 Transcriptional regulatory protein, C terminal FDQ49_16955 PF00072 Response regulator receiver domain FDQ49_16965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDQ49_16965 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_16965 PF13806 Rieske-like [2Fe-2S] domain FDQ49_16965 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDQ49_16965 PF04324 BFD-like [2Fe-2S] binding domain FDQ49_16965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDQ49_16970 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDQ49_16970 PF04324 BFD-like [2Fe-2S] binding domain FDQ49_16970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDQ49_16970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDQ49_16970 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_16975 PF01568 Molydopterin dinucleotide binding domain FDQ49_16975 PF00384 Molybdopterin oxidoreductase FDQ49_16975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDQ49_16975 PF04324 BFD-like [2Fe-2S] binding domain FDQ49_16980 PF12804 MobA-like NTP transferase domain FDQ49_17005 PF01568 Molydopterin dinucleotide binding domain FDQ49_17005 PF00384 Molybdopterin oxidoreductase FDQ49_17005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDQ49_17010 PF04055 Radical SAM superfamily FDQ49_17010 PF06463 Molybdenum Cofactor Synthesis C FDQ49_17020 PF02391 MoaE protein FDQ49_17025 PF00994 Probable molybdopterin binding domain FDQ49_17025 PF01967 MoaC family FDQ49_17030 PF03453 MoeA N-terminal region (domain I and II) FDQ49_17030 PF03454 MoeA C-terminal region (domain IV) FDQ49_17030 PF00994 Probable molybdopterin binding domain FDQ49_17035 PF01638 HxlR-like helix-turn-helix FDQ49_17040 PF00392 Bacterial regulatory proteins, gntR family FDQ49_17040 PF00155 Aminotransferase class I and II FDQ49_17045 PF00892 EamA-like transporter family FDQ49_17065 PF02635 DsrE/DsrF-like family FDQ49_17070 PF16363 GDP-mannose 4,6 dehydratase FDQ49_17075 PF10415 Fumarase C C-terminus FDQ49_17075 PF00206 Lyase FDQ49_17100 PF01266 FAD dependent oxidoreductase FDQ49_17110 PF02542 YgbB family FDQ49_17120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDQ49_17120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDQ49_17125 PF00440 Bacterial regulatory proteins, tetR family FDQ49_17130 PF00158 Sigma-54 interaction domain FDQ49_17130 PF02954 Bacterial regulatory protein, Fis family FDQ49_17130 PF00072 Response regulator receiver domain FDQ49_17135 PF00989 PAS fold FDQ49_17135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDQ49_17135 PF00512 His Kinase A (phospho-acceptor) domain FDQ49_17145 PF04055 Radical SAM superfamily FDQ49_17145 PF00919 Uncharacterized protein family UPF0004 FDQ49_17145 PF18693 TRAM domain FDQ49_17150 PF00696 Amino acid kinase family FDQ49_17155 PF01765 Ribosome recycling factor FDQ49_17160 PF01255 Putative undecaprenyl diphosphate synthase FDQ49_17170 PF13288 DXP reductoisomerase C-terminal domain FDQ49_17170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FDQ49_17170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FDQ49_17175 PF13180 PDZ domain FDQ49_17175 PF02163 Peptidase family M50 FDQ49_17175 PF17820 PDZ domain FDQ49_17180 PF01103 Surface antigen FDQ49_17180 PF07244 Surface antigen variable number repeat FDQ49_17190 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FDQ49_17190 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_17195 PF07977 FabA-like domain FDQ49_17200 PF00132 Bacterial transferase hexapeptide (six repeats) FDQ49_17200 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FDQ49_17215 PF02631 RecX family FDQ49_17220 PF00154 recA bacterial DNA recombination protein FDQ49_17225 PF01479 S4 domain FDQ49_17230 PF13419 Haloacid dehalogenase-like hydrolase FDQ49_17250 PF01037 Lrp/AsnC ligand binding domain FDQ49_17255 PF00266 Aminotransferase class-V FDQ49_17260 PF00324 Amino acid permease FDQ49_17270 PF05922 Peptidase inhibitor I9 FDQ49_17270 PF00082 Subtilase family FDQ49_17275 PF01740 STAS domain FDQ49_17275 PF00916 Sulfate permease family FDQ49_17280 PF02586 SOS response associated peptidase (SRAP) FDQ49_17285 PF07995 Glucose / Sorbosone dehydrogenase FDQ49_17295 PF03707 Bacterial signalling protein N terminal repeat FDQ49_17295 PF00990 Diguanylate cyclase, GGDEF domain FDQ49_17295 PF00563 EAL domain FDQ49_17310 PF02378 Phosphotransferase system, EIIC FDQ49_17310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDQ49_17315 PF00294 pfkB family carbohydrate kinase FDQ49_17320 PF00391 PEP-utilising enzyme, mobile domain FDQ49_17320 PF02896 PEP-utilising enzyme, TIM barrel domain FDQ49_17320 PF00381 PTS HPr component phosphorylation site FDQ49_17320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDQ49_17320 PF05524 PEP-utilising enzyme, N-terminal FDQ49_17345 PF05525 Branched-chain amino acid transport protein FDQ49_17350 PF00557 Metallopeptidase family M24 FDQ49_17355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_17355 PF03466 LysR substrate binding domain FDQ49_17365 PF00462 Glutaredoxin FDQ49_17370 PF00202 Aminotransferase class-III FDQ49_17375 PF00571 CBS domain FDQ49_17375 PF01380 SIS domain FDQ49_17400 PF02881 SRP54-type protein, helical bundle domain FDQ49_17400 PF00448 SRP54-type protein, GTPase domain FDQ49_17410 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDQ49_17425 PF08173 Membrane bound YbgT-like protein FDQ49_17430 PF02322 Cytochrome bd terminal oxidase subunit II FDQ49_17435 PF01654 Cytochrome bd terminal oxidase subunit I FDQ49_17445 PF07290 Protein of unknown function (DUF1449) FDQ49_17455 PF00294 pfkB family carbohydrate kinase FDQ49_17460 PF00593 TonB dependent receptor FDQ49_17460 PF07715 TonB-dependent Receptor Plug Domain FDQ49_17465 PF08367 Peptidase M16C associated FDQ49_17465 PF00675 Insulinase (Peptidase family M16) FDQ49_17465 PF05193 Peptidase M16 inactive domain FDQ49_17470 PF02253 Phospholipase A1 FDQ49_17475 PF02386 Cation transport protein FDQ49_17480 PF02254 TrkA-N domain FDQ49_17480 PF02080 TrkA-C domain FDQ49_17485 PF00585 C-terminal regulatory domain of Threonine dehydratase FDQ49_17485 PF00291 Pyridoxal-phosphate dependent enzyme FDQ49_17490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FDQ49_17505 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDQ49_17505 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDQ49_17515 PF02617 ATP-dependent Clp protease adaptor protein ClpS FDQ49_17520 PF00004 ATPase family associated with various cellular activities (AAA) FDQ49_17520 PF10431 C-terminal, D2-small domain, of ClpB protein FDQ49_17520 PF02861 Clp amino terminal domain, pathogenicity island component FDQ49_17520 PF17871 AAA lid domain FDQ49_17520 PF07724 AAA domain (Cdc48 subfamily) FDQ49_17525 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FDQ49_17530 PF00793 DAHP synthetase I family FDQ49_17545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDQ49_17545 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_17575 PF06418 CTP synthase N-terminus FDQ49_17575 PF00117 Glutamine amidotransferase class-I FDQ49_17580 PF00793 DAHP synthetase I family FDQ49_17585 PF00113 Enolase, C-terminal TIM barrel domain FDQ49_17585 PF03952 Enolase, N-terminal domain FDQ49_17590 PF04239 Protein of unknown function (DUF421) FDQ49_17600 PF04977 Septum formation initiator FDQ49_17605 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FDQ49_17610 PF01144 Coenzyme A transferase FDQ49_17615 PF01144 Coenzyme A transferase FDQ49_17620 PF00108 Thiolase, N-terminal domain FDQ49_17620 PF02803 Thiolase, C-terminal domain FDQ49_17625 PF00206 Lyase FDQ49_17625 PF10397 Adenylosuccinate lyase C-terminus FDQ49_17630 PF00561 alpha/beta hydrolase fold FDQ49_17635 PF07690 Major Facilitator Superfamily FDQ49_17640 PF02627 Carboxymuconolactone decarboxylase family FDQ49_17645 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FDQ49_17645 PF00775 Dioxygenase FDQ49_17650 PF00775 Dioxygenase FDQ49_17655 PF01487 Type I 3-dehydroquinase FDQ49_17660 PF05048 Periplasmic copper-binding protein (NosD) FDQ49_17665 PF04966 Carbohydrate-selective porin, OprB family FDQ49_17670 PF01011 PQQ enzyme repeat FDQ49_17670 PF13360 PQQ-like domain FDQ49_17680 PF04143 Sulphur transport FDQ49_17690 PF00753 Metallo-beta-lactamase superfamily FDQ49_17695 PF01614 Bacterial transcriptional regulator FDQ49_17695 PF09339 IclR helix-turn-helix domain FDQ49_17700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_17700 PF03466 LysR substrate binding domain FDQ49_17705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDQ49_17705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_17705 PF02770 Acyl-CoA dehydrogenase, middle domain FDQ49_17720 PF00106 short chain dehydrogenase FDQ49_17730 PF07690 Major Facilitator Superfamily FDQ49_17740 PF01425 Amidase FDQ49_17745 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FDQ49_17760 PF00355 Rieske [2Fe-2S] domain FDQ49_17760 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FDQ49_17775 PF00175 Oxidoreductase NAD-binding domain FDQ49_17775 PF00111 2Fe-2S iron-sulfur cluster binding domain FDQ49_17780 PF01613 Flavin reductase like domain FDQ49_17785 PF02311 AraC-like ligand binding domain FDQ49_17785 PF12833 Helix-turn-helix domain FDQ49_17790 PF01179 Copper amine oxidase, enzyme domain FDQ49_17790 PF07833 Copper amine oxidase N-terminal domain FDQ49_17790 PF02727 Copper amine oxidase, N2 domain FDQ49_17790 PF02728 Copper amine oxidase, N3 domain FDQ49_17800 PF00171 Aldehyde dehydrogenase family FDQ49_17805 PF12146 Serine aminopeptidase, S33 FDQ49_17810 PF00108 Thiolase, N-terminal domain FDQ49_17810 PF02803 Thiolase, C-terminal domain FDQ49_17815 PF01144 Coenzyme A transferase FDQ49_17820 PF01144 Coenzyme A transferase FDQ49_17825 PF00775 Dioxygenase FDQ49_17825 PF04444 Catechol dioxygenase N terminus FDQ49_17830 PF02426 Muconolactone delta-isomerase FDQ49_17835 PF13378 Enolase C-terminal domain-like FDQ49_17835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FDQ49_17840 PF03466 LysR substrate binding domain FDQ49_17840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_17855 PF00561 alpha/beta hydrolase fold FDQ49_17860 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDQ49_17860 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDQ49_17865 PF00106 short chain dehydrogenase FDQ49_17870 PF01872 RibD C-terminal domain FDQ49_17880 PF00376 MerR family regulatory protein FDQ49_17880 PF09278 MerR, DNA binding FDQ49_17890 PF12706 Beta-lactamase superfamily domain FDQ49_17895 PF00440 Bacterial regulatory proteins, tetR family FDQ49_17895 PF08359 YsiA-like protein, C-terminal region FDQ49_17910 PF16295 Tetracyclin repressor-like, C-terminal domain FDQ49_17910 PF00440 Bacterial regulatory proteins, tetR family FDQ49_17915 PF17287 POTRA domain FDQ49_17915 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FDQ49_17915 PF08479 POTRA domain, ShlB-type FDQ49_17920 PF13018 Extended Signal Peptide of Type V secretion system FDQ49_17920 PF13332 Hemagglutinin repeat FDQ49_17920 PF05860 haemagglutination activity domain FDQ49_17920 PF04829 Pre-toxin domain with VENN motif FDQ49_17945 PF07690 Major Facilitator Superfamily FDQ49_17950 PF04909 Amidohydrolase FDQ49_17965 PF03466 LysR substrate binding domain FDQ49_17965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_17980 PF03466 LysR substrate binding domain FDQ49_17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDQ49_17985 PF07883 Cupin domain FDQ49_17990 PF01494 FAD binding domain FDQ49_17995 PF13417 Glutathione S-transferase, N-terminal domain FDQ49_18000 PF01557 Fumarylacetoacetate (FAA) hydrolase family FDQ49_18005 PF07690 Major Facilitator Superfamily FDQ49_18015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDQ49_18015 PF00529 HlyD membrane-fusion protein of T1SS FDQ49_18030 PF00171 Aldehyde dehydrogenase family