DIW83_00005	SM00382	ATPases associated with a variety of cellular activities
DIW83_00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
DIW83_00010	SM00480	DNA polymerase III beta subunit
DIW83_00020	SM00387	Histidine kinase-like ATPases
DIW83_00020	SM00433	TopoisomeraseII
DIW83_00035	SM00382	ATPases associated with a variety of cellular activities
DIW83_00185	SM00271	DnaJ molecular chaperone homology domain
DIW83_00230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_00235	SM00829	Enoylreductase
DIW83_00255	SM00478	endonuclease III
DIW83_00255	SM00525	DIW83_00255
DIW83_00285	SM00382	ATPases associated with a variety of cellular activities
DIW83_00310	SM01130	DIW83_00310
DIW83_00340	SM00346	helix_turn_helix isocitrate lyase regulation
DIW83_00370	SM00833	Cobalamin synthesis protein cobW C-terminal domain
DIW83_00380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_00380	SM00866	DIW83_00380
DIW83_00510	SM00450	Rhodanese Homology Domain
DIW83_00530	SM00387	Histidine kinase-like ATPases
DIW83_00530	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_00535	SM00448	cheY-homologous receiver domain
DIW83_00535	SM00862	Transcriptional regulatory protein, C terminal
DIW83_00590	SM00257	Lysin motif
DIW83_00625	SM00387	Histidine kinase-like ATPases
DIW83_00625	SM00433	TopoisomeraseII
DIW83_00690	SM00267	diguanylate cyclase
DIW83_00760	SM00842	Cell division protein FtsA
DIW83_00765	SM00864	Tubulin/FtsZ family, GTPase domain
DIW83_00765	SM00865	Tubulin/FtsZ family, C-terminal domain
DIW83_00805	SM00849	Metallo-beta-lactamase superfamily
DIW83_00815	SM00116	Domain in cystathionine beta-synthase and other proteins.
DIW83_00815	SM01240	DIW83_00815
DIW83_00845	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DIW83_00885	SM00344	helix_turn_helix ASNC type
DIW83_00900	SM00421	helix_turn_helix, Lux Regulon
DIW83_00900	SM00448	cheY-homologous receiver domain
DIW83_00910	SM00387	Histidine kinase-like ATPases
DIW83_00910	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_00910	SM00448	cheY-homologous receiver domain
DIW83_00940	SM00267	diguanylate cyclase
DIW83_00960	SM00829	Enoylreductase
DIW83_01005	SM00530	Helix-turn-helix XRE-family like proteins 
DIW83_01015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_01100	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_01170	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_01190	SM00477	DNA/RNA non-specific endonuclease
DIW83_01190	SM00892	DNA/RNA non-specific endonuclease
DIW83_01215	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_01235	SM00357	Cold shock protein domain
DIW83_01250	SM00530	Helix-turn-helix XRE-family like proteins 
DIW83_01255	SM00382	ATPases associated with a variety of cellular activities
DIW83_01265	SM00474	3'-5' exonuclease
DIW83_01315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DIW83_01315	SM00387	Histidine kinase-like ATPases
DIW83_01315	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_01320	SM00448	cheY-homologous receiver domain
DIW83_01320	SM00862	Transcriptional regulatory protein, C terminal
DIW83_01325	SM00316	Ribosomal protein S1-like RNA-binding domain
DIW83_01325	SM00732	Likely ribonuclease with RNase H fold.
DIW83_01335	SM00947	Carbonic anhydrase
DIW83_01355	SM00382	ATPases associated with a variety of cellular activities
DIW83_01360	SM00671	Sel1-like repeats.
DIW83_01495	SM00842	Cell division protein FtsA
DIW83_01515	SM00965	Secretin and TonB N terminus short domain
DIW83_01595	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DIW83_01595	SM00954	Region found in RelA / SpoT proteins
DIW83_01605	SM01409	DIW83_01605
DIW83_01610	SM00072	Guanylate kinase homologues.
DIW83_01800	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
DIW83_01910	SM00116	Domain in cystathionine beta-synthase and other proteins.
DIW83_01950	SM00861	Transketolase, pyrimidine binding domain
DIW83_01960	SM00487	DEAD-like helicases superfamily
DIW83_01960	SM00490	helicase superfamily c-terminal domain
DIW83_01965	SM00382	ATPases associated with a variety of cellular activities
DIW83_02010	SM00487	DEAD-like helicases superfamily
DIW83_02010	SM00490	helicase superfamily c-terminal domain
DIW83_02025	SM00563	Phosphate acyltransferases
DIW83_02075	SM01403	DIW83_02075
DIW83_02095	SM01382	DIW83_02095
DIW83_02095	SM01383	DIW83_02095
DIW83_02110	SM00322	K homology RNA-binding domain
DIW83_02130	SM01374	DIW83_02130
DIW83_02135	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
DIW83_02200	SM00363	S4 RNA-binding domain
DIW83_02200	SM01390	DIW83_02200
DIW83_02205	SM00662	RNA polymerases D
DIW83_02265	SM00316	Ribosomal protein S1-like RNA-binding domain
DIW83_02265	SM00955	DIW83_02265
DIW83_02320	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_02370	SM00729	Elongator protein 3, MiaB family, Radical SAM
DIW83_02400	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
DIW83_02495	SM00878	Biotin carboxylase C-terminal domain
DIW83_02560	SM00650	Ribosomal RNA adenine dimethylases
DIW83_02590	SM00563	Phosphate acyltransferases
DIW83_02595	SM00155	Phospholipase D. Active site motifs.
DIW83_02610	SM00267	diguanylate cyclase
DIW83_02690	SM00450	Rhodanese Homology Domain
DIW83_02715	SM00481	DNA polymerase alpha chain like domain
DIW83_02745	SM01323	DIW83_02745
DIW83_02790	SM00479	DIW83_02790
DIW83_02835	SM00530	Helix-turn-helix XRE-family like proteins 
DIW83_02960	SM00387	Histidine kinase-like ATPases
DIW83_02960	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_03085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DIW83_03085	SM00387	Histidine kinase-like ATPases
DIW83_03085	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_03090	SM00448	cheY-homologous receiver domain
DIW83_03090	SM00862	Transcriptional regulatory protein, C terminal
DIW83_03155	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_03185	SM00849	Metallo-beta-lactamase superfamily
DIW83_03200	SM00957	SecA DEAD-like domain
DIW83_03200	SM00958	SecA preprotein cross-linking domain
DIW83_03250	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_03265	SM00564	beta-propeller repeat
DIW83_03325	SM00838	Elongation factor G C-terminus
DIW83_03345	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
DIW83_03345	SM01232	DIW83_03345
DIW83_03370	SM00671	Sel1-like repeats.
DIW83_03425	SM00448	cheY-homologous receiver domain
DIW83_03430	SM00448	cheY-homologous receiver domain
DIW83_03435	SM00260	Two component signalling adaptor domain
DIW83_03440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
DIW83_03445	SM00073	Histidine Phosphotransfer domain
DIW83_03445	SM00260	Two component signalling adaptor domain
DIW83_03445	SM00387	Histidine kinase-like ATPases
DIW83_03445	SM00448	cheY-homologous receiver domain
DIW83_03445	SM01231	DIW83_03445
DIW83_03600	SM00845	GatB domain
DIW83_03635	SM00316	Ribosomal protein S1-like RNA-binding domain
DIW83_03670	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_03690	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_03695	SM00829	Enoylreductase
DIW83_03905	SM00244	prohibitin homologues
DIW83_03920	SM00563	Phosphate acyltransferases
DIW83_03940	SM00448	cheY-homologous receiver domain
DIW83_03940	SM00862	Transcriptional regulatory protein, C terminal
DIW83_03945	SM00387	Histidine kinase-like ATPases
DIW83_03945	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_04005	SM00822	DIW83_04005
DIW83_04040	SM00014	Acid phosphatase homologues
DIW83_04145	SM00450	Rhodanese Homology Domain
DIW83_04190	SM00861	Transketolase, pyrimidine binding domain
DIW83_04210	SM00881	CoA binding domain
DIW83_04280	SM00851	MGS-like domain
DIW83_04280	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
DIW83_04285	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
DIW83_04305	SM01103	DIW83_04305
DIW83_04315	SM00382	ATPases associated with a variety of cellular activities
DIW83_04390	SM00046	Diacylglycerol kinase catalytic domain (presumed)
DIW83_04400	SM00883	Chaperonin 10 Kd subunit
DIW83_04415	SM00849	Metallo-beta-lactamase superfamily
DIW83_04605	SM00978	DIW83_04605
DIW83_04610	SM00382	ATPases associated with a variety of cellular activities
DIW83_04650	SM00893	Electron transfer flavoprotein domain
DIW83_04655	SM00893	Electron transfer flavoprotein domain
DIW83_04660	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_04665	SM00849	Metallo-beta-lactamase superfamily
DIW83_04670	SM00434	DNA Topoisomerase IV
DIW83_04740	SM00382	ATPases associated with a variety of cellular activities
DIW83_04745	SM00849	Metallo-beta-lactamase superfamily
DIW83_04860	SM00382	ATPases associated with a variety of cellular activities
DIW83_04865	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DIW83_04870	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DIW83_04875	SM01211	DIW83_04875
DIW83_04960	SM00382	ATPases associated with a variety of cellular activities
DIW83_05010	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DIW83_05020	SM00838	Elongation factor G C-terminus
DIW83_05035	SM00358	Double-stranded RNA binding motif
DIW83_05035	SM00535	Ribonuclease III family
DIW83_05105	SM00267	diguanylate cyclase
DIW83_05115	SM00487	DEAD-like helicases superfamily
DIW83_05115	SM00490	helicase superfamily c-terminal domain
DIW83_05130	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DIW83_05150	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
DIW83_05250	SM01329	DIW83_05250
DIW83_05305	SM00880	DIW83_05305
DIW83_05305	SM01118	DIW83_05305
DIW83_05335	SM00487	DEAD-like helicases superfamily
DIW83_05335	SM00490	helicase superfamily c-terminal domain
DIW83_05390	SM00344	helix_turn_helix ASNC type
DIW83_05420	SM00382	ATPases associated with a variety of cellular activities
DIW83_05475	SM00936	Penicillin-binding protein 5, C-terminal domain 
DIW83_05495	SM00257	Lysin motif
DIW83_05530	SM00052	Putative diguanylate phosphodiesterase
DIW83_05545	SM00841	Elongation factor P, C-terminal
DIW83_05545	SM01185	DIW83_05545
DIW83_05655	SM01092	CO dehydrogenase flavoprotein C-terminal domain
DIW83_05660	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
DIW83_05670	SM00463	Small MutS-related domain
DIW83_05755	SM00530	Helix-turn-helix XRE-family like proteins 
DIW83_06035	SM01230	DIW83_06035
DIW83_06095	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DIW83_06105	SM00919	Malic enzyme, NAD binding domain
DIW83_06105	SM01274	DIW83_06105
DIW83_06110	SM00052	Putative diguanylate phosphodiesterase
DIW83_06110	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
DIW83_06110	SM00091	PAS domain
DIW83_06110	SM00267	diguanylate cyclase
DIW83_06125	SM00996	S-adenosyl-L-homocysteine hydrolase
DIW83_06125	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
DIW83_06145	SM00729	Elongator protein 3, MiaB family, Radical SAM
DIW83_06190	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_06240	SM00382	ATPases associated with a variety of cellular activities
DIW83_06285	SM00710	Parallel beta-helix repeats
DIW83_06300	SM00479	DIW83_06300
DIW83_06335	SM00062	Bacterial periplasmic substrate-binding proteins
DIW83_06350	SM00382	ATPases associated with a variety of cellular activities
DIW83_06370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_06395	SM00382	ATPases associated with a variety of cellular activities
DIW83_06405	SM00448	cheY-homologous receiver domain
DIW83_06405	SM00862	Transcriptional regulatory protein, C terminal
DIW83_06410	SM00387	Histidine kinase-like ATPases
DIW83_06410	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_06475	SM00830	Chorismate mutase type II
DIW83_06540	SM00357	Cold shock protein domain
DIW83_06545	SM00487	DEAD-like helicases superfamily
DIW83_06545	SM00490	helicase superfamily c-terminal domain
DIW83_06565	SM00855	Phosphoglycerate mutase family
DIW83_06645	SM00220	Serine/Threonine protein kinases, catalytic domain
DIW83_06855	SM00972	Spore Coat Protein U domain
DIW83_06880	SM00972	Spore Coat Protein U domain
DIW83_06920	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_06970	SM00095	Transthyretin
DIW83_06980	SM00448	cheY-homologous receiver domain
DIW83_06980	SM00862	Transcriptional regulatory protein, C terminal
DIW83_06985	SM00387	Histidine kinase-like ATPases
DIW83_06985	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_07025	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_07030	SM00448	cheY-homologous receiver domain
DIW83_07030	SM00862	Transcriptional regulatory protein, C terminal
DIW83_07090	SM00849	Metallo-beta-lactamase superfamily
DIW83_07100	SM00382	ATPases associated with a variety of cellular activities
DIW83_07100	SM00930	DIW83_07100
DIW83_07115	SM01209	DIW83_07115
DIW83_07115	SM01210	DIW83_07115
DIW83_07120	SM00798	AICARFT/IMPCHase bienzyme
DIW83_07120	SM00851	MGS-like domain
DIW83_07145	SM01228	DIW83_07145
DIW83_07165	SM00460	Transglutaminase/protease-like homologues
DIW83_07175	SM01005	Alanine racemase, C-terminal domain
DIW83_07295	SM00937	DIW83_07295
DIW83_07310	SM00062	Bacterial periplasmic substrate-binding proteins
DIW83_07315	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_07320	SM00822	DIW83_07320
DIW83_07335	SM00903	Flavin reductase like domain
DIW83_07350	SM00905	Dihydroneopterin aldolase
DIW83_07375	SM00387	Histidine kinase-like ATPases
DIW83_07375	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_07380	SM00448	cheY-homologous receiver domain
DIW83_07380	SM00862	Transcriptional regulatory protein, C terminal
DIW83_07385	SM01230	DIW83_07385
DIW83_07465	SM00363	S4 RNA-binding domain
DIW83_07490	SM00853	MutL C terminal dimerisation domain
DIW83_07490	SM01340	DIW83_07490
DIW83_07560	SM00862	Transcriptional regulatory protein, C terminal
DIW83_07575	SM00382	ATPases associated with a variety of cellular activities
DIW83_07585	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_07585	SM00871	Bacterial transcription activator, effector binding domain
DIW83_07610	SM00972	Spore Coat Protein U domain
DIW83_07625	SM00972	Spore Coat Protein U domain
DIW83_07645	SM00830	Chorismate mutase type II
DIW83_07650	SM00344	helix_turn_helix ASNC type
DIW83_07755	SM00382	ATPases associated with a variety of cellular activities
DIW83_07775	SM00831	Cation transporter/ATPase, N-terminus
DIW83_07790	SM00344	helix_turn_helix ASNC type
DIW83_07820	SM00822	DIW83_07820
DIW83_07855	SM00382	ATPases associated with a variety of cellular activities
DIW83_07895	SM00226	Low molecular weight phosphatase family
DIW83_07935	SM00972	Spore Coat Protein U domain
DIW83_07950	SM00972	Spore Coat Protein U domain
DIW83_07970	SM00878	Biotin carboxylase C-terminal domain
DIW83_08000	SM00448	cheY-homologous receiver domain
DIW83_08000	SM01012	DIW83_08000
DIW83_08020	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
DIW83_08030	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
DIW83_08035	SM00729	Elongator protein 3, MiaB family, Radical SAM
DIW83_08050	SM00852	Probable molybdopterin binding domain
DIW83_08055	SM00852	Probable molybdopterin binding domain
DIW83_08065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_08155	SM00382	ATPases associated with a variety of cellular activities
DIW83_08155	SM00448	cheY-homologous receiver domain
DIW83_08160	SM00091	PAS domain
DIW83_08160	SM00387	Histidine kinase-like ATPases
DIW83_08160	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_08170	SM00729	Elongator protein 3, MiaB family, Radical SAM
DIW83_08200	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DIW83_08210	SM00935	Outer membrane protein (OmpH-like)
DIW83_08245	SM00382	ATPases associated with a variety of cellular activities
DIW83_08250	SM00363	S4 RNA-binding domain
DIW83_08275	SM00344	helix_turn_helix ASNC type
DIW83_08320	SM00052	Putative diguanylate phosphodiesterase
DIW83_08320	SM00091	PAS domain
DIW83_08320	SM00267	diguanylate cyclase
DIW83_08400	SM00116	Domain in cystathionine beta-synthase and other proteins.
DIW83_08425	SM00382	ATPases associated with a variety of cellular activities
DIW83_08425	SM00962	SRP54-type protein, GTPase domain
DIW83_08425	SM00963	SRP54-type protein, helical bundle domain
DIW83_08490	SM01264	DIW83_08490
DIW83_08530	SM00859	Semialdehyde dehydrogenase, NAD binding domain
DIW83_08545	SM00382	ATPases associated with a variety of cellular activities
DIW83_08545	SM01086	C-terminal, D2-small domain, of ClpB protein
DIW83_08630	SM00882	Coenzyme A transferase
DIW83_08635	SM00882	Coenzyme A transferase
DIW83_08645	SM00998	Adenylosuccinate lyase C-terminus
DIW83_08680	SM00710	Parallel beta-helix repeats
DIW83_08690	SM00564	beta-propeller repeat
DIW83_08710	SM00849	Metallo-beta-lactamase superfamily
DIW83_08715	SM00346	helix_turn_helix isocitrate lyase regulation
DIW83_08735	SM00855	Phosphoglycerate mutase family
DIW83_08755	SM00347	helix_turn_helix multiple antibiotic resistance protein
DIW83_08800	SM00903	Flavin reductase like domain
DIW83_08805	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_08835	SM00882	Coenzyme A transferase
DIW83_08840	SM00882	Coenzyme A transferase
DIW83_08855	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
DIW83_08870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_08870	SM00895	DIW83_08870
DIW83_08925	SM00422	helix_turn_helix, mercury resistance
DIW83_08945	SM00671	Sel1-like repeats.
DIW83_08970	SM00912	haemagglutination activity domain
DIW83_08980	SM00860	SMI1 / KNR4 family
DIW83_09015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_09015	SM00866	DIW83_09015
DIW83_09090	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_09105	SM00829	Enoylreductase
DIW83_09120	SM00382	ATPases associated with a variety of cellular activities
DIW83_09130	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_09140	SM01400	DIW83_09140
DIW83_09175	SM00421	helix_turn_helix, Lux Regulon
DIW83_09255	SM00829	Enoylreductase
DIW83_09295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DIW83_09295	SM00387	Histidine kinase-like ATPases
DIW83_09295	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_09300	SM00448	cheY-homologous receiver domain
DIW83_09300	SM00862	Transcriptional regulatory protein, C terminal
DIW83_09365	SM00829	Enoylreductase
DIW83_09395	SM00155	Phospholipase D. Active site motifs.
DIW83_09420	SM00729	Elongator protein 3, MiaB family, Radical SAM
DIW83_09495	SM00923	MbtH-like protein
DIW83_09500	SM00823	Phosphopantetheine attachment site
DIW83_09500	SM00824	Thioesterase
DIW83_09530	SM00382	ATPases associated with a variety of cellular activities
DIW83_09565	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_09575	SM00903	Flavin reductase like domain
DIW83_09600	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_09620	SM00849	Metallo-beta-lactamase superfamily
DIW83_09625	SM01034	Sensors of blue-light using FAD
DIW83_09655	SM00882	Coenzyme A transferase
DIW83_09660	SM00882	Coenzyme A transferase
DIW83_09715	SM00567	E-Z type HEAT repeats
DIW83_09720	SM00382	ATPases associated with a variety of cellular activities
DIW83_09745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_09745	SM00866	DIW83_09745
DIW83_09755	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_09780	SM00849	Metallo-beta-lactamase superfamily
DIW83_09785	SM00382	ATPases associated with a variety of cellular activities
DIW83_09795	SM00829	Enoylreductase
DIW83_09815	SM00861	Transketolase, pyrimidine binding domain
DIW83_09825	SM00729	Elongator protein 3, MiaB family, Radical SAM
DIW83_09840	SM00267	diguanylate cyclase
DIW83_09895	SM01324	DIW83_09895
DIW83_09935	SM00382	ATPases associated with a variety of cellular activities
DIW83_10005	SM00855	Phosphoglycerate mutase family
DIW83_10065	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_10075	SM00411	bacterial (prokaryotic) histone like domain
DIW83_10110	SM00271	DnaJ molecular chaperone homology domain
DIW83_10125	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
DIW83_10135	SM00487	DEAD-like helicases superfamily
DIW83_10135	SM00490	helicase superfamily c-terminal domain
DIW83_10135	SM00982	DIW83_10135
DIW83_10135	SM01058	CarD-like/TRCF domain
DIW83_10190	SM00382	ATPases associated with a variety of cellular activities
DIW83_10265	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_10280	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
DIW83_10290	SM00411	bacterial (prokaryotic) histone like domain
DIW83_10295	SM00316	Ribosomal protein S1-like RNA-binding domain
DIW83_10320	SM00986	Uracil DNA glycosylase superfamily
DIW83_10320	SM00987	UreE urease accessory protein, C-terminal domain 
DIW83_10380	SM00382	ATPases associated with a variety of cellular activities
DIW83_10395	SM00470	ParB-like nuclease domain
DIW83_10455	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
DIW83_10465	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DIW83_10485	SM00382	ATPases associated with a variety of cellular activities
DIW83_10495	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_10515	SM00344	helix_turn_helix ASNC type
DIW83_10550	SM00867	YceI-like domain 
DIW83_10595	SM00232	JAB/MPN domain
DIW83_10700	SM00507	HNH nucleases
DIW83_10740	SM00861	Transketolase, pyrimidine binding domain
DIW83_10770	SM00530	Helix-turn-helix XRE-family like proteins 
DIW83_10790	SM00729	Elongator protein 3, MiaB family, Radical SAM
DIW83_10790	SM00876	Biotin and Thiamin Synthesis associated domain
DIW83_10875	SM01236	DIW83_10875
DIW83_10885	SM00563	Phosphate acyltransferases
DIW83_10895	SM00344	helix_turn_helix ASNC type
DIW83_10905	SM00382	ATPases associated with a variety of cellular activities
DIW83_10920	SM00062	Bacterial periplasmic substrate-binding proteins
DIW83_10955	SM00382	ATPases associated with a variety of cellular activities
DIW83_10955	SM00930	DIW83_10955
DIW83_10975	SM00100	Cyclic nucleotide-monophosphate binding domain
DIW83_10975	SM00419	helix_turn_helix, cAMP Regulatory protein
DIW83_11010	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
DIW83_11025	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_11050	SM00870	DIW83_11050
DIW83_11055	SM00481	DNA polymerase alpha chain like domain
DIW83_11105	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DIW83_11135	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_11135	SM00895	DIW83_11135
DIW83_11160	SM00382	ATPases associated with a variety of cellular activities
DIW83_11165	SM00062	Bacterial periplasmic substrate-binding proteins
DIW83_11215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_11235	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
DIW83_11280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_11320	SM00450	Rhodanese Homology Domain
DIW83_11355	SM00062	Bacterial periplasmic substrate-binding proteins
DIW83_11360	SM00062	Bacterial periplasmic substrate-binding proteins
DIW83_11365	SM00382	ATPases associated with a variety of cellular activities
DIW83_11390	SM00421	helix_turn_helix, Lux Regulon
DIW83_11390	SM00448	cheY-homologous receiver domain
DIW83_11395	SM00387	Histidine kinase-like ATPases
DIW83_11395	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_11395	SM00448	cheY-homologous receiver domain
DIW83_11405	SM00344	helix_turn_helix ASNC type
DIW83_11425	SM00384	DNA binding domain with preference for A/T rich regions
DIW83_11445	SM01060	DIW83_11445
DIW83_11450	SM01236	DIW83_11450
DIW83_11535	SM00878	Biotin carboxylase C-terminal domain
DIW83_11580	SM00882	Coenzyme A transferase
DIW83_11585	SM00882	Coenzyme A transferase
DIW83_11620	SM00346	helix_turn_helix isocitrate lyase regulation
DIW83_11625	SM01236	DIW83_11625
DIW83_11655	SM00346	helix_turn_helix isocitrate lyase regulation
DIW83_11695	SM00382	ATPases associated with a variety of cellular activities
DIW83_11705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_11705	SM00866	DIW83_11705
DIW83_11715	SM00346	helix_turn_helix isocitrate lyase regulation
DIW83_11735	SM01060	DIW83_11735
DIW83_11860	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_11885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_11885	SM00895	DIW83_11885
DIW83_11895	SM01130	DIW83_11895
DIW83_11910	SM00422	helix_turn_helix, mercury resistance
DIW83_11975	SM00382	ATPases associated with a variety of cellular activities
DIW83_11975	SM01086	C-terminal, D2-small domain, of ClpB protein
DIW83_12060	SM00382	ATPases associated with a variety of cellular activities
DIW83_12095	SM00796	Allophanate hydrolase subunit 1
DIW83_12095	SM00797	Allophanate hydrolase subunit 2
DIW83_12095	SM00878	Biotin carboxylase C-terminal domain
DIW83_12110	SM00829	Enoylreductase
DIW83_12120	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_12145	SM00671	Sel1-like repeats.
DIW83_12155	SM00878	Biotin carboxylase C-terminal domain
DIW83_12160	SM00796	Allophanate hydrolase subunit 1
DIW83_12160	SM00797	Allophanate hydrolase subunit 2
DIW83_12350	SM00422	helix_turn_helix, mercury resistance
DIW83_12355	SM00357	Cold shock protein domain
DIW83_12380	SM00382	ATPases associated with a variety of cellular activities
DIW83_12385	SM00344	helix_turn_helix ASNC type
DIW83_12410	SM00972	Spore Coat Protein U domain
DIW83_12445	SM00052	Putative diguanylate phosphodiesterase
DIW83_12475	SM00822	DIW83_12475
DIW83_12490	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
DIW83_12490	SM00534	ATPase domain of DNA mismatch repair MUTS family
DIW83_12535	SM00382	ATPases associated with a variety of cellular activities
DIW83_12550	SM00382	ATPases associated with a variety of cellular activities
DIW83_12570	SM00116	Domain in cystathionine beta-synthase and other proteins.
DIW83_12575	SM00840	DIW83_12575
DIW83_12640	SM00357	Cold shock protein domain
DIW83_12660	SM00530	Helix-turn-helix XRE-family like proteins 
DIW83_12715	SM00422	helix_turn_helix, mercury resistance
DIW83_12780	SM00382	ATPases associated with a variety of cellular activities
DIW83_12780	SM00487	DEAD-like helicases superfamily
DIW83_12780	SM00490	helicase superfamily c-terminal domain
DIW83_12780	SM00847	Helicase associated domain (HA2)  Add an annotation
DIW83_12840	SM00255	Toll - interleukin 1 - resistance
DIW83_13015	SM00981	DIW83_13015
DIW83_13030	SM00382	ATPases associated with a variety of cellular activities
DIW83_13030	SM01086	C-terminal, D2-small domain, of ClpB protein
DIW83_13050	SM00100	Cyclic nucleotide-monophosphate binding domain
DIW83_13050	SM00419	helix_turn_helix, cAMP Regulatory protein
DIW83_13070	SM00788	Adenylosuccinate synthetase
DIW83_13080	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DIW83_13085	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
DIW83_13180	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_13230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_13230	SM00895	DIW83_13230
DIW83_13235	SM00347	helix_turn_helix multiple antibiotic resistance protein
DIW83_13290	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_13315	SM00344	helix_turn_helix ASNC type
DIW83_13330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_13330	SM00895	DIW83_13330
DIW83_13490	SM00267	diguanylate cyclase
DIW83_13500	SM00479	DIW83_13500
DIW83_13525	SM00382	ATPases associated with a variety of cellular activities
DIW83_13545	SM00257	Lysin motif
DIW83_13550	SM00479	DIW83_13550
DIW83_13600	SM00422	helix_turn_helix, mercury resistance
DIW83_13620	SM01011	Aminopeptidase P, N-terminal domain
DIW83_13690	SM00382	ATPases associated with a variety of cellular activities
DIW83_13690	SM00464	Found in ATP-dependent protease La (LON)
DIW83_13710	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
DIW83_13720	SM00478	endonuclease III
DIW83_13775	SM00988	UreE urease accessory protein, N-terminal domain
DIW83_13825	SM00116	Domain in cystathionine beta-synthase and other proteins.
DIW83_13825	SM01091	Transporter associated domain
DIW83_13925	SM00382	ATPases associated with a variety of cellular activities
DIW83_13935	SM00947	Carbonic anhydrase
DIW83_14000	SM01018	B12 binding domain
DIW83_14010	SM00950	DIW83_14010
DIW83_14035	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_14125	SM00346	helix_turn_helix isocitrate lyase regulation
DIW83_14175	SM01322	DIW83_14175
DIW83_14265	SM01130	DIW83_14265
DIW83_14330	SM00487	DEAD-like helicases superfamily
DIW83_14350	SM00487	DEAD-like helicases superfamily
DIW83_14360	SM00530	Helix-turn-helix XRE-family like proteins 
DIW83_14420	SM01004	Delta-aminolevulinic acid dehydratase
DIW83_14470	SM00382	ATPases associated with a variety of cellular activities
DIW83_14545	SM00563	Phosphate acyltransferases
DIW83_14585	SM00843	DIW83_14585
DIW83_14625	SM00838	Elongation factor G C-terminus
DIW83_14625	SM00889	Elongation factor G, domain IV
DIW83_14645	SM00825	Beta-ketoacyl synthase
DIW83_14705	SM01329	DIW83_14705
DIW83_14810	SM00495	Chitin-binding domain type 3
DIW83_15005	SM00400	zinc finger
DIW83_15005	SM00493	DIW83_15005
DIW83_15015	SM00028	Tetratricopeptide repeats
DIW83_15050	SM01400	DIW83_15050
DIW83_15095	SM00257	Lysin motif
DIW83_15105	SM00822	DIW83_15105
DIW83_15110	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
DIW83_15145	SM00363	S4 RNA-binding domain
DIW83_15200	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DIW83_15200	SM00292	breast cancer carboxy-terminal domain
DIW83_15200	SM00532	Ligase N family
DIW83_15205	SM00771	ZipA, C-terminal domain (FtsZ-binding)
DIW83_15215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_15235	SM00382	ATPases associated with a variety of cellular activities
DIW83_15235	SM00962	SRP54-type protein, GTPase domain
DIW83_15235	SM00963	SRP54-type protein, helical bundle domain
DIW83_15390	SM00894	Excalibur calcium-binding domain
DIW83_15395	SM00357	Cold shock protein domain
DIW83_15440	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
DIW83_15440	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
DIW83_15445	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
DIW83_15470	SM00267	diguanylate cyclase
DIW83_15480	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DIW83_15480	SM00387	Histidine kinase-like ATPases
DIW83_15480	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_15485	SM00448	cheY-homologous receiver domain
DIW83_15485	SM00862	Transcriptional regulatory protein, C terminal
DIW83_15595	SM00903	Flavin reductase like domain
DIW83_15630	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_15920	SM00331	Sigma factor PP2C-like phosphatases
DIW83_15940	SM00347	helix_turn_helix multiple antibiotic resistance protein
DIW83_15950	SM00382	ATPases associated with a variety of cellular activities
DIW83_15970	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
DIW83_15970	SM00474	3'-5' exonuclease
DIW83_15970	SM00475	5'-3' exonuclease
DIW83_15970	SM00482	DNA polymerase A domain
DIW83_15985	SM00977	TilS substrate C-terminal domain
DIW83_16005	SM00357	Cold shock protein domain
DIW83_16005	SM00382	ATPases associated with a variety of cellular activities
DIW83_16005	SM00959	Rho termination factor, N-terminal domain
DIW83_16020	SM00411	bacterial (prokaryotic) histone like domain
DIW83_16025	SM00873	B3/4 domain
DIW83_16025	SM00874	tRNA synthetase B5 domain
DIW83_16025	SM00896	Ferredoxin-fold anticodon binding domain
DIW83_16080	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
DIW83_16125	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DIW83_16140	SM00954	Region found in RelA / SpoT proteins
DIW83_16160	SM00073	Histidine Phosphotransfer domain
DIW83_16160	SM00387	Histidine kinase-like ATPases
DIW83_16160	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_16160	SM00448	cheY-homologous receiver domain
DIW83_16200	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
DIW83_16200	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
DIW83_16260	SM00226	Low molecular weight phosphatase family
DIW83_16265	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
DIW83_16275	SM00422	helix_turn_helix, mercury resistance
DIW83_16285	SM00899	DIW83_16285
DIW83_16335	SM00448	cheY-homologous receiver domain
DIW83_16335	SM00862	Transcriptional regulatory protein, C terminal
DIW83_16340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DIW83_16340	SM00387	Histidine kinase-like ATPases
DIW83_16340	SM00388	His Kinase A (phosphoacceptor) domain
DIW83_16345	SM00746	metallochaperone-like domain
DIW83_16380	SM00271	DnaJ molecular chaperone homology domain
DIW83_16500	SM00843	DIW83_16500
DIW83_16505	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
DIW83_16520	SM00974	DIW83_16520
DIW83_16530	SM00487	DEAD-like helicases superfamily
DIW83_16635	SM01236	DIW83_16635
DIW83_16650	SM00052	Putative diguanylate phosphodiesterase
DIW83_16650	SM00267	diguanylate cyclase
DIW83_16695	SM00382	ATPases associated with a variety of cellular activities
DIW83_16715	SM00479	DIW83_16715
DIW83_16725	SM00450	Rhodanese Homology Domain
DIW83_16750	SM00564	beta-propeller repeat
DIW83_16775	SM00028	Tetratricopeptide repeats
DIW83_16785	SM00562	DIW83_16785
DIW83_16795	SM00014	Acid phosphatase homologues
DIW83_16805	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DIW83_16805	SM00245	tail specific protease
DIW83_16880	SM00382	ATPases associated with a variety of cellular activities
DIW83_16880	SM00994	ClpX C4-type zinc finger
DIW83_16880	SM01086	C-terminal, D2-small domain, of ClpB protein
DIW83_16900	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
DIW83_16905	SM00917	LeuA allosteric (dimerisation) domain
DIW83_16920	SM00671	Sel1-like repeats.
DIW83_17070	SM00360	RNA recognition motif
DIW83_17090	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
DIW83_17090	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
DIW83_17090	SM00493	DIW83_17090
DIW83_17105	SM00829	Enoylreductase
DIW83_17115	SM00382	ATPases associated with a variety of cellular activities
DIW83_17150	SM00859	Semialdehyde dehydrogenase, NAD binding domain
DIW83_17165	SM00870	DIW83_17165
DIW83_17175	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_17180	SM00316	Ribosomal protein S1-like RNA-binding domain
DIW83_17195	SM01329	DIW83_17195
DIW83_17250	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
DIW83_17290	SM00363	S4 RNA-binding domain
DIW83_17300	SM00316	Ribosomal protein S1-like RNA-binding domain
DIW83_17330	SM00729	Elongator protein 3, MiaB family, Radical SAM
DIW83_17400	SM00849	Metallo-beta-lactamase superfamily
DIW83_17440	SM00116	Domain in cystathionine beta-synthase and other proteins.
DIW83_17440	SM01091	Transporter associated domain
DIW83_17475	SM00487	DEAD-like helicases superfamily
DIW83_17475	SM00490	helicase superfamily c-terminal domain
DIW83_17495	SM00271	DnaJ molecular chaperone homology domain
DIW83_17510	SM00316	Ribosomal protein S1-like RNA-binding domain
DIW83_17510	SM00322	K homology RNA-binding domain
DIW83_17515	SM01387	DIW83_17515
DIW83_17525	SM00382	ATPases associated with a variety of cellular activities
DIW83_17640	SM00316	Ribosomal protein S1-like RNA-binding domain
DIW83_17700	SM00967	RNA 2'-O ribose methyltransferase substrate binding
DIW83_17710	SM00028	Tetratricopeptide repeats
DIW83_17725	SM00732	Likely ribonuclease with RNase H fold.
DIW83_17745	SM00346	helix_turn_helix isocitrate lyase regulation
DIW83_17755	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_17770	SM00278	Helix-hairpin-helix DNA-binding motif class 1
DIW83_17770	SM00465	GIY-YIG type nucleases (URI domain)
DIW83_17825	SM00422	helix_turn_helix, mercury resistance
DIW83_17850	SM00387	Histidine kinase-like ATPases
DIW83_17895	SM00663	RNA polymerase I subunit A N-terminus
DIW83_17920	SM00649	Ribosomal protein L11/L12
DIW83_17925	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
DIW83_17925	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
DIW83_17975	SM00240	Forkhead associated domain
DIW83_17985	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
DIW83_17995	SM00528	Domain in histone-like proteins of HNS family
DIW83_18030	SM00448	cheY-homologous receiver domain
DIW83_18030	SM00850	LytTr DNA-binding domain
DIW83_18120	SM00899	DIW83_18120
DIW83_18150	SM00421	helix_turn_helix, Lux Regulon
DIW83_18150	SM00448	cheY-homologous receiver domain
DIW83_18160	SM00382	ATPases associated with a variety of cellular activities
DIW83_18160	SM00448	cheY-homologous receiver domain
DIW83_18165	SM00245	tail specific protease
DIW83_18230	SM00938	Nitrogen regulatory protein P-II
DIW83_18280	SM00382	ATPases associated with a variety of cellular activities
DIW83_18300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_18305	SM01007	Class II Aldolase and Adducin N-terminal domain
DIW83_18310	SM01130	DIW83_18310
DIW83_18345	SM00434	DNA Topoisomerase IV
DIW83_18365	SM01091	Transporter associated domain
DIW83_18380	SM00641	Glycosyl hydrolases family 25
DIW83_18400	SM00729	Elongator protein 3, MiaB family, Radical SAM
DIW83_18410	SM00422	helix_turn_helix, mercury resistance
DIW83_18530	SM00342	helix_turn_helix, arabinose operon control protein
DIW83_18550	SM00382	ATPases associated with a variety of cellular activities
DIW83_18600	SM00382	ATPases associated with a variety of cellular activities
DIW83_18620	SM00919	Malic enzyme, NAD binding domain
DIW83_18620	SM01274	DIW83_18620
DIW83_18625	SM00836	DALR anticodon binding domain
DIW83_18625	SM01016	Arginyl tRNA synthetase N terminal dom
DIW83_18740	SM00823	Phosphopantetheine attachment site
DIW83_18740	SM00824	Thioesterase
DIW83_18745	SM00823	Phosphopantetheine attachment site
DIW83_18745	SM01294	DIW83_18745
DIW83_18760	SM00421	helix_turn_helix, Lux Regulon
DIW83_18830	SM01005	Alanine racemase, C-terminal domain
DIW83_18840	SM00344	helix_turn_helix ASNC type
DIW83_18885	SM00825	Beta-ketoacyl synthase
DIW83_18935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_18935	SM00895	DIW83_18935
DIW83_18960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
DIW83_18960	SM00895	DIW83_18960
DIW83_18990	SM00984	UDP binding domain
DIW83_19055	SM00984	UDP binding domain
DIW83_19065	SM00226	Low molecular weight phosphatase family
DIW83_19090	SM00644	DIW83_19090
DIW83_19175	SM00062	Bacterial periplasmic substrate-binding proteins
DIW83_19180	SM00062	Bacterial periplasmic substrate-binding proteins
DIW83_19195	SM00382	ATPases associated with a variety of cellular activities
DIW83_19215	SM00904	Riboflavin kinase
DIW83_19240	SM00248	ankyrin repeats
DIW83_19290	SM00849	Metallo-beta-lactamase superfamily
DIW83_19310	SM00235	Zinc-dependent metalloprotease
DIW83_19335	SM01001	AIR carboxylase
DIW83_19360	SM00014	Acid phosphatase homologues
DIW83_19425	SM01234	DIW83_19425
