locus-tag	class	description
Berthold_005	PF03738	Glutathionylspermidine synthase preATP-grasp
Berthold_012	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Berthold_012	PF00986	DNA gyrase B subunit, carboxyl terminus
Berthold_012	PF00204	DNA gyrase B
Berthold_012	PF01751	Toprim domain
Berthold_013	PF00959	Phage lysozyme
Berthold_021	PF14490	Helix-hairpin-helix containing domain
Berthold_021	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
Berthold_021	PF13538	UvrD-like helicase C-terminal domain
Berthold_078	PF00303	Thymidylate synthase
Berthold_081	PF00571	CBS domain
Berthold_081	PF01380	SIS domain
Berthold_095	PF03104	DNA polymerase family B, exonuclease domain
Berthold_095	PF00136	DNA polymerase family B
Berthold_099	PF00004	ATPase family associated with various cellular activities (AAA)
Berthold_099	PF17862	AAA+ lid domain
Berthold_099	PF06480	FtsH Extracellular
Berthold_099	PF01434	Peptidase family M41
Berthold_105	PF06470	SMC proteins Flexible Hinge Domain
Berthold_105	PF02463	RecF/RecN/SMC N terminal domain
Berthold_133	PF01258	Prokaryotic dksA/traR C4-type zinc finger
Berthold_146	PF00472	RF-1 domain
Berthold_146	PF03462	PCRF domain
Berthold_211	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
Berthold_213	PF00293	NUDIX domain
Berthold_221	PF00268	Ribonucleotide reductase, small chain
Berthold_223	PF03477	ATP cone domain
Berthold_223	PF02867	Ribonucleotide reductase, barrel domain
Berthold_223	PF00317	Ribonucleotide reductase, all-alpha domain
Berthold_226	PF00303	Thymidylate synthase
Berthold_228	PF00186	Dihydrofolate reductase
Berthold_242	PF08400	Prophage tail fibre N-terminal
Berthold_242	PF03335	Phage tail fibre repeat
Berthold_242	PF07484	Phage Tail Collar Domain
Berthold_246	PF00521	DNA gyrase/topoisomerase IV, subunit A
Berthold_246	PF03989	DNA gyrase C-terminal domain, beta-propeller