locus-tag class description LPS07_00005 PF00308 Bacterial dnaA protein LPS07_00005 PF08299 Bacterial dnaA protein helix-turn-helix LPS07_00005 PF11638 DnaA N-terminal domain LPS07_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LPS07_00010 PF02767 DNA polymerase III beta subunit, central domain LPS07_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LPS07_00015 PF02463 RecF/RecN/SMC N terminal domain LPS07_00020 PF00204 DNA gyrase B LPS07_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LPS07_00020 PF18053 DNA gyrase B subunit insert domain LPS07_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_00020 PF01751 Toprim domain LPS07_00035 PF12848 ABC transporter LPS07_00035 PF00005 ABC transporter LPS07_00055 PF01521 Iron-sulphur cluster biosynthesis LPS07_00060 PF00561 alpha/beta hydrolase fold LPS07_00065 PF03702 Anhydro-N-acetylmuramic acid kinase LPS07_00070 PF00579 tRNA synthetases class I (W and Y) LPS07_00100 PF02798 Glutathione S-transferase, N-terminal domain LPS07_00110 PF00209 Sodium:neurotransmitter symporter family LPS07_00120 PF01189 16S rRNA methyltransferase RsmB/F LPS07_00120 PF01029 NusB family LPS07_00125 PF02911 Formyl transferase, C-terminal domain LPS07_00125 PF00551 Formyl transferase LPS07_00130 PF00920 Dehydratase family LPS07_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_00145 PF03466 LysR substrate binding domain LPS07_00150 PF00860 Permease family LPS07_00155 PF00311 Phosphoenolpyruvate carboxylase LPS07_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region LPS07_00160 PF00440 Bacterial regulatory proteins, tetR family LPS07_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPS07_00170 PF00873 AcrB/AcrD/AcrF family LPS07_00180 PF01556 DnaJ C terminal domain LPS07_00180 PF00226 DnaJ domain LPS07_00180 PF00684 DnaJ central domain LPS07_00190 PF01113 Dihydrodipicolinate reductase, N-terminus LPS07_00190 PF05173 Dihydrodipicolinate reductase, C-terminus LPS07_00200 PF07690 Major Facilitator Superfamily LPS07_00205 PF00248 Aldo/keto reductase family LPS07_00210 PF03466 LysR substrate binding domain LPS07_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_00225 PF00392 Bacterial regulatory proteins, gntR family LPS07_00225 PF00155 Aminotransferase class I and II LPS07_00230 PF00107 Zinc-binding dehydrogenase LPS07_00230 PF08240 Alcohol dehydrogenase GroES-like domain LPS07_00235 PF03352 Methyladenine glycosylase LPS07_00250 PF10576 Iron-sulfur binding domain of endonuclease III LPS07_00250 PF00633 Helix-hairpin-helix motif LPS07_00250 PF14815 NUDIX domain LPS07_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein LPS07_00265 PF07043 Protein of unknown function (DUF1328) LPS07_00270 PF03692 Putative zinc- or iron-chelating domain LPS07_00275 PF07995 Glucose / Sorbosone dehydrogenase LPS07_00280 PF16193 AAA C-terminal domain LPS07_00280 PF12002 MgsA AAA+ ATPase C terminal LPS07_00280 PF00004 ATPase family associated with various cellular activities (AAA) LPS07_00285 PF01226 Formate/nitrite transporter LPS07_00295 PF01259 SAICAR synthetase LPS07_00305 PF00701 Dihydrodipicolinate synthetase family LPS07_00310 PF00857 Isochorismatase family LPS07_00315 PF01758 Sodium Bile acid symporter family LPS07_00320 PF01554 MatE LPS07_00325 PF04463 Protein of unknown function (DUF523) LPS07_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPS07_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPS07_00345 PF02798 Glutathione S-transferase, N-terminal domain LPS07_00345 PF14497 Glutathione S-transferase, C-terminal domain LPS07_00355 PF00324 Amino acid permease LPS07_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPS07_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPS07_00375 PF07702 UTRA domain LPS07_00375 PF00392 Bacterial regulatory proteins, gntR family LPS07_00380 PF05962 HutD LPS07_00385 PF01175 Urocanase Rossmann-like domain LPS07_00385 PF17392 Urocanase C-terminal domain LPS07_00385 PF17391 Urocanase N-terminal domain LPS07_00390 PF00221 Aromatic amino acid lyase LPS07_00395 PF00324 Amino acid permease LPS07_00400 PF01979 Amidohydrolase family LPS07_00405 PF00491 Arginase family LPS07_00415 PF13419 Haloacid dehalogenase-like hydrolase LPS07_00420 PF01177 Asp/Glu/Hydantoin racemase LPS07_00425 PF01810 LysE type translocator LPS07_00440 PF06470 SMC proteins Flexible Hinge Domain LPS07_00440 PF02463 RecF/RecN/SMC N terminal domain LPS07_00445 PF01420 Type I restriction modification DNA specificity domain LPS07_00450 PF02384 N-6 DNA Methylase LPS07_00455 PF01380 SIS domain LPS07_00460 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_00460 PF12804 MobA-like NTP transferase domain LPS07_00460 PF14602 Hexapeptide repeat of succinyl-transferase LPS07_00465 PF04608 Phosphatidylglycerophosphatase A LPS07_00470 PF02769 AIR synthase related protein, C-terminal domain LPS07_00470 PF00586 AIR synthase related protein, N-terminal domain LPS07_00475 PF01029 NusB family LPS07_00480 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPS07_00485 PF00925 GTP cyclohydrolase II LPS07_00485 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPS07_00510 PF02580 D-Tyr-tRNA(Tyr) deacylase LPS07_00515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPS07_00515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPS07_00520 PF00581 Rhodanese-like domain LPS07_00525 PF02666 Phosphatidylserine decarboxylase LPS07_00530 PF03069 Acetamidase/Formamidase family LPS07_00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_00545 PF00989 PAS fold LPS07_00545 PF11808 Phosphate regulon sensor protein PhoR LPS07_00545 PF00512 His Kinase A (phospho-acceptor) domain LPS07_00550 PF00072 Response regulator receiver domain LPS07_00550 PF00486 Transcriptional regulatory protein, C terminal LPS07_00560 PF00106 short chain dehydrogenase LPS07_00565 PF01554 MatE LPS07_00570 PF00155 Aminotransferase class I and II LPS07_00575 PF04286 Protein of unknown function (DUF445) LPS07_00590 PF04262 Glutamate-cysteine ligase LPS07_00595 PF02600 Disulfide bond formation protein DsbB LPS07_00600 PF13296 Putative type VI secretion system Rhs element Vgr LPS07_00600 PF04717 Type VI secretion system, phage-baseplate injector LPS07_00600 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LPS07_00605 PF00182 Chitinase class I LPS07_00620 PF05728 Uncharacterised protein family (UPF0227) LPS07_00625 PF01751 Toprim domain LPS07_00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_00625 PF00986 DNA gyrase B subunit, carboxyl terminus LPS07_00625 PF00204 DNA gyrase B LPS07_00630 PF04115 Ureidoglycolate lyase LPS07_00635 PF03561 Allantoicase repeat LPS07_00640 PF01494 FAD binding domain LPS07_00650 PF00860 Permease family LPS07_00655 PF00576 HIUase/Transthyretin family LPS07_00685 PF02683 Cytochrome C biogenesis protein transmembrane region LPS07_00685 PF11412 Disulphide bond corrector protein DsbC LPS07_00690 PF07694 5TMR of 5TMR-LYT LPS07_00690 PF00990 Diguanylate cyclase, GGDEF domain LPS07_00695 PF07859 alpha/beta hydrolase fold LPS07_00705 PF03960 ArsC family LPS07_00710 PF03372 Endonuclease/Exonuclease/phosphatase family LPS07_00715 PF00156 Phosphoribosyl transferase domain LPS07_00725 PF00593 TonB dependent receptor LPS07_00725 PF07715 TonB-dependent Receptor Plug Domain LPS07_00735 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPS07_00735 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPS07_00740 PF04101 Glycosyltransferase family 28 C-terminal domain LPS07_00740 PF03033 Glycosyltransferase family 28 N-terminal domain LPS07_00745 PF02875 Mur ligase family, glutamate ligase domain LPS07_00745 PF01225 Mur ligase family, catalytic domain LPS07_00745 PF08245 Mur ligase middle domain LPS07_00750 PF07478 D-ala D-ala ligase C-terminus LPS07_00750 PF01820 D-ala D-ala ligase N-terminus LPS07_00755 PF08478 POTRA domain, FtsQ-type LPS07_00755 PF03799 Cell division protein FtsQ LPS07_00760 PF02491 SHS2 domain inserted in FTSA LPS07_00765 PF00091 Tubulin/FtsZ family, GTPase domain LPS07_00765 PF12327 FtsZ family, C-terminal domain LPS07_00770 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPS07_00780 PF01551 Peptidase family M23 LPS07_00785 PF00456 Transketolase, thiamine diphosphate binding domain LPS07_00785 PF17831 Pyruvate dehydrogenase E1 component middle domain LPS07_00790 PF02817 e3 binding domain LPS07_00790 PF00364 Biotin-requiring enzyme LPS07_00790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPS07_00800 PF01169 Uncharacterized protein family UPF0016 LPS07_00805 PF00593 TonB dependent receptor LPS07_00805 PF07715 TonB-dependent Receptor Plug Domain LPS07_00810 PF00258 Flavodoxin LPS07_00810 PF01613 Flavin reductase like domain LPS07_00815 PF03692 Putative zinc- or iron-chelating domain LPS07_00820 PF00478 IMP dehydrogenase / GMP reductase domain LPS07_00820 PF00571 CBS domain LPS07_00825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPS07_00825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPS07_00825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPS07_00825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPS07_00830 PF01243 Pyridoxamine 5'-phosphate oxidase LPS07_00830 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPS07_00835 PF01368 DHH family LPS07_00835 PF17768 RecJ OB domain LPS07_00835 PF02272 DHHA1 domain LPS07_00855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPS07_00860 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPS07_00865 PF04452 RNA methyltransferase LPS07_00870 PF00924 Mechanosensitive ion channel LPS07_00870 PF05552 Conserved TM helix LPS07_00880 PF16177 Acetyl-coenzyme A synthetase N-terminus LPS07_00880 PF00501 AMP-binding enzyme LPS07_00880 PF13193 AMP-binding enzyme C-terminal domain LPS07_00885 PF00857 Isochorismatase family LPS07_00890 PF01037 Lrp/AsnC ligand binding domain LPS07_00895 PF00296 Luciferase-like monooxygenase LPS07_00900 PF03358 NADPH-dependent FMN reductase LPS07_00905 PF00072 Response regulator receiver domain LPS07_00905 PF00196 Bacterial regulatory proteins, luxR family LPS07_00915 PF00072 Response regulator receiver domain LPS07_00915 PF00672 HAMP domain LPS07_00915 PF00512 His Kinase A (phospho-acceptor) domain LPS07_00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_00915 PF01627 Hpt domain LPS07_00920 PF04341 Protein of unknown function, DUF485 LPS07_00925 PF00474 Sodium:solute symporter family LPS07_00935 PF02028 BCCT, betaine/carnitine/choline family transporter LPS07_00945 PF00990 Diguanylate cyclase, GGDEF domain LPS07_00955 PF17760 UvrA interaction domain LPS07_00955 PF17755 UvrA DNA-binding domain LPS07_00960 PF16925 Tetracyclin repressor-like, C-terminal domain LPS07_00960 PF00440 Bacterial regulatory proteins, tetR family LPS07_00965 PF08240 Alcohol dehydrogenase GroES-like domain LPS07_00965 PF00107 Zinc-binding dehydrogenase LPS07_00975 PF06942 GlpM protein LPS07_00980 PF03070 TENA/THI-4/PQQC family LPS07_00980 PF02581 Thiamine monophosphate synthase LPS07_00980 PF08543 Phosphomethylpyrimidine kinase LPS07_00990 PF07690 Major Facilitator Superfamily LPS07_00995 PF00436 Single-strand binding protein family LPS07_01005 PF03591 AzlC protein LPS07_01015 PF00324 Amino acid permease LPS07_01020 PF00392 Bacterial regulatory proteins, gntR family LPS07_01020 PF00155 Aminotransferase class I and II LPS07_01025 PF00202 Aminotransferase class-III LPS07_01030 PF00171 Aldehyde dehydrogenase family LPS07_01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_01040 PF00857 Isochorismatase family LPS07_01045 PF05726 Pirin C-terminal cupin domain LPS07_01045 PF02678 Pirin LPS07_01050 PF01593 Flavin containing amine oxidoreductase LPS07_01070 PF07690 Major Facilitator Superfamily LPS07_01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_01075 PF03466 LysR substrate binding domain LPS07_01095 PF00248 Aldo/keto reductase family LPS07_01100 PF12833 Helix-turn-helix domain LPS07_01100 PF02311 AraC-like ligand binding domain LPS07_01130 PF01638 HxlR-like helix-turn-helix LPS07_01135 PF02525 Flavodoxin-like fold LPS07_01145 PF13193 AMP-binding enzyme C-terminal domain LPS07_01145 PF00501 AMP-binding enzyme LPS07_01150 PF01161 Phosphatidylethanolamine-binding protein LPS07_01170 PF12833 Helix-turn-helix domain LPS07_01180 PF02705 K+ potassium transporter LPS07_01210 PF00230 Major intrinsic protein LPS07_01225 PF00977 Histidine biosynthesis protein LPS07_01230 PF01636 Phosphotransferase enzyme family LPS07_01245 PF03992 Antibiotic biosynthesis monooxygenase LPS07_01260 PF00005 ABC transporter LPS07_01260 PF00664 ABC transporter transmembrane region LPS07_01265 PF00977 Histidine biosynthesis protein LPS07_01280 PF00117 Glutamine amidotransferase class-I LPS07_01285 PF00475 Imidazoleglycerol-phosphate dehydratase LPS07_01305 PF00583 Acetyltransferase (GNAT) family LPS07_01310 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LPS07_01310 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LPS07_01320 PF00672 HAMP domain LPS07_01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_01320 PF00512 His Kinase A (phospho-acceptor) domain LPS07_01325 PF00072 Response regulator receiver domain LPS07_01325 PF00486 Transcriptional regulatory protein, C terminal LPS07_01330 PF17674 HHH domain LPS07_01330 PF00575 S1 RNA binding domain LPS07_01330 PF09371 Tex-like protein N-terminal domain LPS07_01330 PF16921 Tex protein YqgF-like domain LPS07_01335 PF00916 Sulfate permease family LPS07_01335 PF01740 STAS domain LPS07_01340 PF00106 short chain dehydrogenase LPS07_01345 PF01053 Cys/Met metabolism PLP-dependent enzyme LPS07_01350 PF00005 ABC transporter LPS07_01350 PF12848 ABC transporter LPS07_01375 PF04191 Phospholipid methyltransferase LPS07_01395 PF00529 HlyD membrane-fusion protein of T1SS LPS07_01395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPS07_01400 PF00873 AcrB/AcrD/AcrF family LPS07_01405 PF01545 Cation efflux family LPS07_01435 PF00324 Amino acid permease LPS07_01450 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPS07_01465 PF01795 MraW methylase family LPS07_01475 PF03717 Penicillin-binding Protein dimerisation domain LPS07_01475 PF00905 Penicillin binding protein transpeptidase domain LPS07_01480 PF01225 Mur ligase family, catalytic domain LPS07_01480 PF08245 Mur ligase middle domain LPS07_01480 PF02875 Mur ligase family, glutamate ligase domain LPS07_01485 PF01225 Mur ligase family, catalytic domain LPS07_01485 PF08245 Mur ligase middle domain LPS07_01485 PF02875 Mur ligase family, glutamate ligase domain LPS07_01490 PF00953 Glycosyl transferase family 4 LPS07_01500 PF13847 Methyltransferase domain LPS07_01505 PF17092 Penicillin-binding protein OB-like domain LPS07_01505 PF00912 Transglycosylase LPS07_01505 PF00905 Penicillin binding protein transpeptidase domain LPS07_01510 PF11104 Type IV pilus assembly protein PilM; LPS07_01515 PF05137 Fimbrial assembly protein (PilN) LPS07_01520 PF04350 Pilus assembly protein, PilO LPS07_01530 PF07660 Secretin and TonB N terminus short domain LPS07_01530 PF03958 Bacterial type II/III secretion system short domain LPS07_01530 PF11741 AMIN domain LPS07_01530 PF00263 Bacterial type II and III secretion system protein LPS07_01535 PF01202 Shikimate kinase LPS07_01540 PF01761 3-dehydroquinate synthase LPS07_01550 PF01493 GXGXG motif LPS07_01550 PF01645 Conserved region in glutamate synthase LPS07_01550 PF00310 Glutamine amidotransferases class-II LPS07_01550 PF04898 Glutamate synthase central domain LPS07_01555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPS07_01555 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_01565 PF04011 LemA family LPS07_01570 PF04536 TPM domain LPS07_01580 PF00114 Pilin (bacterial filament) LPS07_01580 PF07963 Prokaryotic N-terminal methylation motif LPS07_01590 PF04932 O-Antigen ligase LPS07_01590 PF15864 Protein glycosylation ligase LPS07_01590 PF11846 Virulence factor membrane-bound polymerase, C-terminal LPS07_01595 PF00210 Ferritin-like domain LPS07_01600 PF04324 BFD-like [2Fe-2S] binding domain LPS07_01610 PF01042 Endoribonuclease L-PSP LPS07_01615 PF13291 ACT domain LPS07_01615 PF04607 Region found in RelA / SpoT proteins LPS07_01615 PF02824 TGS domain LPS07_01625 PF01192 RNA polymerase Rpb6 LPS07_01630 PF00625 Guanylate kinase LPS07_01635 PF02401 LytB protein LPS07_01675 PF00886 Ribosomal protein S16 LPS07_01680 PF01782 RimM N-terminal domain LPS07_01680 PF05239 PRC-barrel domain LPS07_01685 PF01746 tRNA (Guanine-1)-methyltransferase LPS07_01690 PF01245 Ribosomal protein L19 LPS07_01695 PF00561 alpha/beta hydrolase fold LPS07_01700 PF03280 Proteobacterial lipase chaperone protein LPS07_01705 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPS07_01705 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPS07_01705 PF09157 Pseudouridine synthase II TruB, C-terminal LPS07_01710 PF01925 Sulfite exporter TauE/SafE LPS07_01720 PF00892 EamA-like transporter family LPS07_01725 PF00892 EamA-like transporter family LPS07_01730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPS07_01730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPS07_01735 PF02913 FAD linked oxidases, C-terminal domain LPS07_01735 PF01565 FAD binding domain LPS07_01745 PF03992 Antibiotic biosynthesis monooxygenase LPS07_01750 PF02525 Flavodoxin-like fold LPS07_01760 PF07690 Major Facilitator Superfamily LPS07_01765 PF12805 FUSC-like inner membrane protein yccS LPS07_01770 PF00080 Copper/zinc superoxide dismutase (SODC) LPS07_01775 PF01594 AI-2E family transporter LPS07_01780 PF13614 AAA domain LPS07_01800 PF08241 Methyltransferase domain LPS07_01810 PF00324 Amino acid permease LPS07_01815 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LPS07_01815 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LPS07_01820 PF00202 Aminotransferase class-III LPS07_01825 PF04958 Arginine N-succinyltransferase beta subunit LPS07_01830 PF00171 Aldehyde dehydrogenase family LPS07_01835 PF04996 Succinylarginine dihydrolase LPS07_01840 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LPS07_01855 PF00082 Subtilase family LPS07_01855 PF05922 Peptidase inhibitor I9 LPS07_01870 PF03466 LysR substrate binding domain LPS07_01870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_01875 PF00892 EamA-like transporter family LPS07_01895 PF05746 DALR anticodon binding domain LPS07_01895 PF02092 Glycyl-tRNA synthetase beta subunit LPS07_01900 PF02091 Glycyl-tRNA synthetase alpha subunit LPS07_01925 PF00571 CBS domain LPS07_01925 PF01743 Poly A polymerase head domain LPS07_01930 PF04024 PspC domain LPS07_01940 PF12806 Acetyl-CoA dehydrogenase C-terminal like LPS07_01940 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_01940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_01940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_01950 PF08501 Shikimate dehydrogenase substrate binding domain LPS07_01950 PF01488 Shikimate / quinate 5-dehydrogenase LPS07_01950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPS07_01955 PF01218 Coproporphyrinogen III oxidase LPS07_01960 PF00925 GTP cyclohydrolase II LPS07_01965 PF02780 Transketolase, C-terminal domain LPS07_01965 PF02779 Transketolase, pyrimidine binding domain LPS07_01965 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPS07_01970 PF00459 Inositol monophosphatase family LPS07_01975 PF12343 Cold shock protein DEAD box A LPS07_01975 PF00270 DEAD/DEAH box helicase LPS07_01975 PF03880 DbpA RNA binding domain LPS07_01975 PF00271 Helicase conserved C-terminal domain LPS07_01985 PF00005 ABC transporter LPS07_01990 PF02405 Permease MlaE LPS07_02000 PF05494 MlaC protein LPS07_02010 PF01544 CorA-like Mg2+ transporter protein LPS07_02015 PF03641 Possible lysine decarboxylase LPS07_02020 PF00293 NUDIX domain LPS07_02025 PF00156 Phosphoribosyl transferase domain LPS07_02030 PF00270 DEAD/DEAH box helicase LPS07_02030 PF00271 Helicase conserved C-terminal domain LPS07_02030 PF17191 RecG wedge domain LPS07_02045 PF01553 Acyltransferase LPS07_02055 PF00375 Sodium:dicarboxylate symporter family LPS07_02065 PF01926 50S ribosome-binding GTPase LPS07_02070 PF02082 Transcriptional regulator LPS07_02075 PF00175 Oxidoreductase NAD-binding domain LPS07_02075 PF00042 Globin LPS07_02075 PF00970 Oxidoreductase FAD-binding domain LPS07_02085 PF05872 Bacterial protein of unknown function (DUF853) LPS07_02090 PF01053 Cys/Met metabolism PLP-dependent enzyme LPS07_02095 PF00117 Glutamine amidotransferase class-I LPS07_02100 PF00338 Ribosomal protein S10p/S20e LPS07_02105 PF00297 Ribosomal protein L3 LPS07_02110 PF00573 Ribosomal protein L4/L1 family LPS07_02115 PF00276 Ribosomal protein L23 LPS07_02120 PF00181 Ribosomal Proteins L2, RNA binding domain LPS07_02120 PF03947 Ribosomal Proteins L2, C-terminal domain LPS07_02125 PF00203 Ribosomal protein S19 LPS07_02130 PF00237 Ribosomal protein L22p/L17e LPS07_02140 PF00252 Ribosomal protein L16p/L10e LPS07_02145 PF00831 Ribosomal L29 protein LPS07_02150 PF00366 Ribosomal protein S17 LPS07_02155 PF00238 Ribosomal protein L14p/L23e LPS07_02160 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPS07_02160 PF00467 KOW motif LPS07_02165 PF00281 Ribosomal protein L5 LPS07_02165 PF00673 ribosomal L5P family C-terminus LPS07_02170 PF00253 Ribosomal protein S14p/S29e LPS07_02175 PF00410 Ribosomal protein S8 LPS07_02180 PF00347 Ribosomal protein L6 LPS07_02185 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPS07_02190 PF00333 Ribosomal protein S5, N-terminal domain LPS07_02190 PF03719 Ribosomal protein S5, C-terminal domain LPS07_02195 PF00327 Ribosomal protein L30p/L7e LPS07_02200 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPS07_02205 PF00344 SecY translocase LPS07_02210 PF00444 Ribosomal protein L36 LPS07_02215 PF00416 Ribosomal protein S13/S18 LPS07_02220 PF00411 Ribosomal protein S11 LPS07_02225 PF00163 Ribosomal protein S4/S9 N-terminal domain LPS07_02225 PF01479 S4 domain LPS07_02230 PF01000 RNA polymerase Rpb3/RpoA insert domain LPS07_02230 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPS07_02230 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPS07_02235 PF01196 Ribosomal protein L17 LPS07_02240 PF00743 Flavin-binding monooxygenase-like LPS07_02245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_02245 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_02245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_02250 PF03937 Flavinator of succinate dehydrogenase LPS07_02280 PF09526 Probable metal-binding protein (DUF2387) LPS07_02285 PF01432 Peptidase family M3 LPS07_02290 PF17876 Cold shock domain LPS07_02290 PF08461 Ribonuclease R winged-helix domain LPS07_02290 PF00773 RNB domain LPS07_02290 PF00575 S1 RNA binding domain LPS07_02290 PF08206 Ribonuclease B OB domain LPS07_02340 PF01557 Fumarylacetoacetate (FAA) hydrolase family LPS07_02345 PF03631 Virulence factor BrkB LPS07_02350 PF03358 NADPH-dependent FMN reductase LPS07_02375 PF02130 Uncharacterized protein family UPF0054 LPS07_02380 PF02562 PhoH-like protein LPS07_02385 PF04055 Radical SAM superfamily LPS07_02385 PF01938 TRAM domain LPS07_02385 PF00919 Uncharacterized protein family UPF0004 LPS07_02390 PF01551 Peptidase family M23 LPS07_02390 PF10145 Phage-related minor tail protein LPS07_02390 PF01464 Transglycosylase SLT domain LPS07_02400 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPS07_02400 PF00056 lactate/malate dehydrogenase, NAD binding domain LPS07_02420 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPS07_02425 PF01066 CDP-alcohol phosphatidyltransferase LPS07_02470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_02470 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_02470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_02475 PF17932 Tetracyclin repressor-like, C-terminal domain LPS07_02475 PF00440 Bacterial regulatory proteins, tetR family LPS07_02490 PF01039 Carboxyl transferase domain LPS07_02495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_02495 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_02495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_02505 PF02785 Biotin carboxylase C-terminal domain LPS07_02505 PF00289 Biotin carboxylase, N-terminal domain LPS07_02505 PF00364 Biotin-requiring enzyme LPS07_02505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPS07_02535 PF04386 Stringent starvation protein B LPS07_02540 PF00043 Glutathione S-transferase, C-terminal domain LPS07_02540 PF13417 Glutathione S-transferase, N-terminal domain LPS07_02545 PF00380 Ribosomal protein S9/S16 LPS07_02550 PF00572 Ribosomal protein L13 LPS07_02555 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPS07_02560 PF00398 Ribosomal RNA adenine dimethylase LPS07_02565 PF00149 Calcineurin-like phosphoesterase LPS07_02585 PF13167 GTP-binding GTPase N-terminal LPS07_02585 PF01926 50S ribosome-binding GTPase LPS07_02585 PF16360 GTP-binding GTPase Middle Region LPS07_02595 PF13091 PLD-like domain LPS07_02600 PF00149 Calcineurin-like phosphoesterase LPS07_02600 PF10518 TAT (twin-arginine translocation) pathway signal sequence LPS07_02605 PF00691 OmpA family LPS07_02605 PF01389 OmpA-like transmembrane domain LPS07_02610 PF17152 Periplasmic sensor domain LPS07_02610 PF00990 Diguanylate cyclase, GGDEF domain LPS07_02615 PF13689 YfiR/HmsC-like LPS07_02650 PF00403 Heavy-metal-associated domain LPS07_02650 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_02650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPS07_02660 PF04273 Putative phosphatase (DUF442) LPS07_02660 PF00753 Metallo-beta-lactamase superfamily LPS07_02665 PF00561 alpha/beta hydrolase fold LPS07_02670 PF00085 Thioredoxin LPS07_02675 PF03061 Thioesterase superfamily LPS07_02690 PF04461 Protein of unknown function (DUF520) LPS07_02700 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LPS07_02700 PF01266 FAD dependent oxidoreductase LPS07_02710 PF03795 YCII-related domain LPS07_02715 PF04279 Intracellular septation protein A LPS07_02720 PF02811 PHP domain LPS07_02725 PF01062 Bestrophin, RFP-TM, chloride channel LPS07_02730 PF04002 RadC-like JAB domain LPS07_02735 PF02441 Flavoprotein LPS07_02735 PF04127 DNA / pantothenate metabolism flavoprotein LPS07_02740 PF07549 SecD/SecF GG Motif LPS07_02740 PF02355 Protein export membrane protein LPS07_02745 PF07549 SecD/SecF GG Motif LPS07_02745 PF13721 SecD export protein N-terminal TM region LPS07_02745 PF02355 Protein export membrane protein LPS07_02750 PF02699 Preprotein translocase subunit LPS07_02755 PF01702 Queuine tRNA-ribosyltransferase LPS07_02760 PF02547 Queuosine biosynthesis protein LPS07_02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_02770 PF00512 His Kinase A (phospho-acceptor) domain LPS07_02770 PF00072 Response regulator receiver domain LPS07_02770 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPS07_02775 PF03710 Glutamate-ammonia ligase adenylyltransferase LPS07_02775 PF08335 GlnD PII-uridylyltransferase LPS07_02780 PF01063 Amino-transferase class IV LPS07_02790 PF01522 Polysaccharide deacetylase LPS07_02805 PF00535 Glycosyl transferase family 2 LPS07_02820 PF01336 OB-fold nucleic acid binding domain LPS07_02820 PF00152 tRNA synthetases class II (D, K and N) LPS07_02820 PF02938 GAD domain LPS07_02830 PF00593 TonB dependent receptor LPS07_02830 PF07715 TonB-dependent Receptor Plug Domain LPS07_02850 PF06146 Phosphate-starvation-inducible E LPS07_02855 PF00043 Glutathione S-transferase, C-terminal domain LPS07_02855 PF02798 Glutathione S-transferase, N-terminal domain LPS07_02860 PF03466 LysR substrate binding domain LPS07_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_02865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_02865 PF12806 Acetyl-CoA dehydrogenase C-terminal like LPS07_02865 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_02865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_02870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_02870 PF12806 Acetyl-CoA dehydrogenase C-terminal like LPS07_02870 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_02870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_02880 PF00512 His Kinase A (phospho-acceptor) domain LPS07_02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_02880 PF00672 HAMP domain LPS07_02885 PF00072 Response regulator receiver domain LPS07_02885 PF00486 Transcriptional regulatory protein, C terminal LPS07_02895 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPS07_02915 PF01923 Cobalamin adenosyltransferase LPS07_02920 PF00593 TonB dependent receptor LPS07_02920 PF07715 TonB-dependent Receptor Plug Domain LPS07_02925 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPS07_02930 PF00291 Pyridoxal-phosphate dependent enzyme LPS07_02955 PF00290 Tryptophan synthase alpha chain LPS07_02960 PF01039 Carboxyl transferase domain LPS07_02965 PF08245 Mur ligase middle domain LPS07_02965 PF02875 Mur ligase family, glutamate ligase domain LPS07_02980 PF00753 Metallo-beta-lactamase superfamily LPS07_02985 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPS07_02985 PF00578 AhpC/TSA family LPS07_02990 PF01043 SecA preprotein cross-linking domain LPS07_02990 PF07517 SecA DEAD-like domain LPS07_02990 PF02810 SEC-C motif LPS07_02990 PF07516 SecA Wing and Scaffold domain LPS07_03000 PF00083 Sugar (and other) transporter LPS07_03000 PF07690 Major Facilitator Superfamily LPS07_03005 PF03006 Haemolysin-III related LPS07_03015 PF13673 Acetyltransferase (GNAT) domain LPS07_03030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LPS07_03030 PF00378 Enoyl-CoA hydratase/isomerase LPS07_03030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LPS07_03035 PF02803 Thiolase, C-terminal domain LPS07_03035 PF00108 Thiolase, N-terminal domain LPS07_03040 PF12833 Helix-turn-helix domain LPS07_03040 PF02311 AraC-like ligand binding domain LPS07_03045 PF02515 CoA-transferase family III LPS07_03050 PF04966 Carbohydrate-selective porin, OprB family LPS07_03055 PF01011 PQQ enzyme repeat LPS07_03060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPS07_03060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPS07_03070 PF00893 Small Multidrug Resistance protein LPS07_03080 PF02803 Thiolase, C-terminal domain LPS07_03080 PF00108 Thiolase, N-terminal domain LPS07_03085 PF07963 Prokaryotic N-terminal methylation motif LPS07_03085 PF00114 Pilin (bacterial filament) LPS07_03090 PF13505 Outer membrane protein beta-barrel domain LPS07_03090 PF00691 OmpA family LPS07_03100 PF01139 tRNA-splicing ligase RtcB LPS07_03105 PF00324 Amino acid permease LPS07_03110 PF08468 Methyltransferase small domain N-terminal LPS07_03110 PF05175 Methyltransferase small domain LPS07_03115 PF00860 Permease family LPS07_03120 PF00679 Elongation factor G C-terminus LPS07_03120 PF00009 Elongation factor Tu GTP binding domain LPS07_03120 PF03144 Elongation factor Tu domain 2 LPS07_03125 PF01741 Large-conductance mechanosensitive channel, MscL LPS07_03135 PF02264 LamB porin LPS07_03145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPS07_03145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPS07_03145 PF06827 Zinc finger found in FPG and IleRS LPS07_03150 PF02245 Methylpurine-DNA glycosylase (MPG) LPS07_03155 PF07715 TonB-dependent Receptor Plug Domain LPS07_03155 PF00593 TonB dependent receptor LPS07_03160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPS07_03175 PF10411 Disulfide bond isomerase protein N-terminus LPS07_03175 PF13098 Thioredoxin-like domain LPS07_03180 PF01571 Aminomethyltransferase folate-binding domain LPS07_03195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LPS07_03195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LPS07_03200 PF00860 Permease family LPS07_03205 PF01613 Flavin reductase like domain LPS07_03210 PF01042 Endoribonuclease L-PSP LPS07_03215 PF00857 Isochorismatase family LPS07_03220 PF00296 Luciferase-like monooxygenase LPS07_03225 PF00881 Nitroreductase family LPS07_03230 PF12697 Alpha/beta hydrolase family LPS07_03235 PF04343 Protein of unknown function, DUF488 LPS07_03240 PF03831 PhnA domain LPS07_03240 PF08274 PhnA Zinc-Ribbon LPS07_03245 PF07411 Domain of unknown function (DUF1508) LPS07_03250 PF04073 Aminoacyl-tRNA editing domain LPS07_03250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPS07_03250 PF03129 Anticodon binding domain LPS07_03255 PF00873 AcrB/AcrD/AcrF family LPS07_03270 PF00072 Response regulator receiver domain LPS07_03275 PF00072 Response regulator receiver domain LPS07_03280 PF01584 CheW-like domain LPS07_03285 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPS07_03285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPS07_03290 PF01584 CheW-like domain LPS07_03290 PF00072 Response regulator receiver domain LPS07_03290 PF01627 Hpt domain LPS07_03290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_03300 PF01546 Peptidase family M20/M25/M40 LPS07_03300 PF07687 Peptidase dimerisation domain LPS07_03305 PF08085 Entericidin EcnA/B family LPS07_03315 PF04304 Protein of unknown function (DUF454) LPS07_03320 PF17969 L,D-transpeptidase C-terminal domain LPS07_03320 PF03734 L,D-transpeptidase catalytic domain LPS07_03360 PF00667 FAD binding domain LPS07_03360 PF00258 Flavodoxin LPS07_03360 PF00175 Oxidoreductase NAD-binding domain LPS07_03370 PF12805 FUSC-like inner membrane protein yccS LPS07_03375 PF07690 Major Facilitator Superfamily LPS07_03380 PF00881 Nitroreductase family LPS07_03395 PF01235 Sodium:alanine symporter family LPS07_03400 PF01734 Patatin-like phospholipase LPS07_03405 PF00291 Pyridoxal-phosphate dependent enzyme LPS07_03405 PF13291 ACT domain LPS07_03410 PF05992 SbmA/BacA-like family LPS07_03415 PF05649 Peptidase family M13 LPS07_03415 PF01431 Peptidase family M13 LPS07_03440 PF02637 GatB domain LPS07_03440 PF02934 GatB/GatE catalytic domain LPS07_03445 PF01425 Amidase LPS07_03450 PF02686 Glu-tRNAGln amidotransferase C subunit LPS07_03460 PF04085 rod shape-determining protein MreC LPS07_03465 PF04093 rod shape-determining protein MreD LPS07_03470 PF02545 Maf-like protein LPS07_03475 PF00575 S1 RNA binding domain LPS07_03475 PF10150 Ribonuclease E/G family LPS07_03485 PF06974 Protein of unknown function (DUF1298) LPS07_03485 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LPS07_03490 PF01507 Phosphoadenosine phosphosulfate reductase family LPS07_03505 PF02525 Flavodoxin-like fold LPS07_03525 PF02673 Bacitracin resistance protein BacA LPS07_03530 PF06719 AraC-type transcriptional regulator N-terminus LPS07_03530 PF12833 Helix-turn-helix domain LPS07_03535 PF16197 Ketoacyl-synthetase C-terminal extension LPS07_03535 PF08659 KR domain LPS07_03535 PF09277 Erythronolide synthase, docking LPS07_03535 PF08990 Erythronolide synthase docking LPS07_03535 PF00698 Acyl transferase domain LPS07_03535 PF00550 Phosphopantetheine attachment site LPS07_03535 PF08240 Alcohol dehydrogenase GroES-like domain LPS07_03535 PF02801 Beta-ketoacyl synthase, C-terminal domain LPS07_03535 PF00109 Beta-ketoacyl synthase, N-terminal domain LPS07_03535 PF14765 Polyketide synthase dehydratase LPS07_03540 PF01965 DJ-1/PfpI family LPS07_03560 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LPS07_03565 PF00293 NUDIX domain LPS07_03565 PF09297 NADH pyrophosphatase zinc ribbon domain LPS07_03570 PF00324 Amino acid permease LPS07_03575 PF04303 PrpF protein LPS07_03580 PF00348 Polyprenyl synthetase LPS07_03585 PF04237 YjbR LPS07_03590 PF01145 SPFH domain / Band 7 family LPS07_03600 PF01734 Patatin-like phospholipase LPS07_03625 PF08019 Phosphoethanolamine transferase EptA/EptB LPS07_03625 PF00884 Sulfatase LPS07_03630 PF00072 Response regulator receiver domain LPS07_03630 PF00486 Transcriptional regulatory protein, C terminal LPS07_03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_03635 PF00512 His Kinase A (phospho-acceptor) domain LPS07_03635 PF08521 Two-component sensor kinase N-terminal LPS07_03645 PF00909 Ammonium Transporter Family LPS07_03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_03650 PF03466 LysR substrate binding domain LPS07_03675 PF08264 Anticodon-binding domain of tRNA LPS07_03675 PF00133 tRNA synthetases class I (I, L, M and V) LPS07_03675 PF10458 Valyl tRNA synthetase tRNA binding arm LPS07_03695 PF01906 Putative heavy-metal-binding LPS07_03700 PF01906 Putative heavy-metal-binding LPS07_03705 PF02321 Outer membrane efflux protein LPS07_03710 PF00873 AcrB/AcrD/AcrF family LPS07_03715 PF00529 HlyD membrane-fusion protein of T1SS LPS07_03715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPS07_03720 PF01569 PAP2 superfamily LPS07_03730 PF00348 Polyprenyl synthetase LPS07_03735 PF00829 Ribosomal prokaryotic L21 protein LPS07_03740 PF01016 Ribosomal L27 protein LPS07_03745 PF03548 Outer membrane lipoprotein carrier protein LolA LPS07_03755 PF02403 Seryl-tRNA synthetase N-terminal domain LPS07_03755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPS07_03760 PF10414 Sirohaem synthase dimerisation region LPS07_03760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPS07_03760 PF14824 Sirohaem biosynthesis protein central LPS07_03765 PF00588 SpoU rRNA Methylase family LPS07_03795 PF03358 NADPH-dependent FMN reductase LPS07_03800 PF13520 Amino acid permease LPS07_03805 PF00465 Iron-containing alcohol dehydrogenase LPS07_03815 PF03099 Biotin/lipoate A/B protein ligase family LPS07_03820 PF04359 Protein of unknown function (DUF493) LPS07_03825 PF04542 Sigma-70 region 2 LPS07_03825 PF04545 Sigma-70, region 4 LPS07_03825 PF04546 Sigma-70, non-essential region LPS07_03825 PF03979 Sigma-70 factor, region 1.1 LPS07_03825 PF00140 Sigma-70 factor, region 1.2 LPS07_03825 PF04539 Sigma-70 region 3 LPS07_03840 PF00581 Rhodanese-like domain LPS07_03840 PF17773 UPF0176 acylphosphatase like domain LPS07_03850 PF00285 Citrate synthase, C-terminal domain LPS07_03860 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPS07_03865 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPS07_03870 PF00890 FAD binding domain LPS07_03870 PF02910 Fumarate reductase flavoprotein C-term LPS07_03875 PF13085 2Fe-2S iron-sulfur cluster binding domain LPS07_03890 PF16078 2-oxoglutarate dehydrogenase N-terminus LPS07_03890 PF00676 Dehydrogenase E1 component LPS07_03890 PF16870 2-oxoglutarate dehydrogenase C-terminal LPS07_03890 PF02779 Transketolase, pyrimidine binding domain LPS07_03895 PF00364 Biotin-requiring enzyme LPS07_03895 PF02817 e3 binding domain LPS07_03895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPS07_03900 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_03900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPS07_03905 PF08442 ATP-grasp domain LPS07_03905 PF00549 CoA-ligase LPS07_03910 PF02629 CoA binding domain LPS07_03910 PF00549 CoA-ligase LPS07_03925 PF00579 tRNA synthetases class I (W and Y) LPS07_03930 PF05661 Protein of unknown function (DUF808) LPS07_03935 PF04228 Putative neutral zinc metallopeptidase LPS07_03940 PF00999 Sodium/hydrogen exchanger family LPS07_03955 PF09587 Bacterial capsule synthesis protein PGA_cap LPS07_03965 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPS07_03975 PF00582 Universal stress protein family LPS07_03980 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_03985 PF01042 Endoribonuclease L-PSP LPS07_03990 PF00440 Bacterial regulatory proteins, tetR family LPS07_03995 PF01272 Transcription elongation factor, GreA/GreB, C-term LPS07_03995 PF03449 Transcription elongation factor, N-terminal LPS07_04000 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPS07_04000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPS07_04000 PF02142 MGS-like domain LPS07_04005 PF00117 Glutamine amidotransferase class-I LPS07_04005 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPS07_04025 PF01985 CRS1 / YhbY (CRM) domain LPS07_04030 PF01728 FtsJ-like methyltransferase LPS07_04035 PF00004 ATPase family associated with various cellular activities (AAA) LPS07_04035 PF17862 AAA+ lid domain LPS07_04035 PF06480 FtsH Extracellular LPS07_04035 PF01434 Peptidase family M41 LPS07_04040 PF00809 Pterin binding enzyme LPS07_04055 PF09423 PhoD-like phosphatase LPS07_04055 PF16655 PhoD-like phosphatase, N-terminal domain LPS07_04070 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPS07_04070 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPS07_04085 PF00083 Sugar (and other) transporter LPS07_04090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPS07_04090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPS07_04095 PF01266 FAD dependent oxidoreductase LPS07_04095 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPS07_04100 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LPS07_04100 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LPS07_04105 PF00781 Diacylglycerol kinase catalytic domain LPS07_04110 PF00149 Calcineurin-like phosphoesterase LPS07_04120 PF00166 Chaperonin 10 Kd subunit LPS07_04125 PF00118 TCP-1/cpn60 chaperonin family LPS07_04175 PF00717 Peptidase S24-like LPS07_04415 PF13356 Arm DNA-binding domain LPS07_04415 PF14659 Phage integrase, N-terminal SAM-like domain LPS07_04415 PF00589 Phage integrase family LPS07_04420 PF01219 Prokaryotic diacylglycerol kinase LPS07_04430 PF03009 Glycerophosphoryl diester phosphodiesterase family LPS07_04435 PF00873 AcrB/AcrD/AcrF family LPS07_04445 PF01435 Peptidase family M48 LPS07_04450 PF01464 Transglycosylase SLT domain LPS07_04455 PF01171 PP-loop family LPS07_04465 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPS07_04465 PF01464 Transglycosylase SLT domain LPS07_04470 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPS07_04470 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPS07_04475 PF03449 Transcription elongation factor, N-terminal LPS07_04475 PF01272 Transcription elongation factor, GreA/GreB, C-term LPS07_04485 PF03180 NLPA lipoprotein LPS07_04495 PF00480 ROK family LPS07_04510 PF00529 HlyD membrane-fusion protein of T1SS LPS07_04510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPS07_04515 PF00873 AcrB/AcrD/AcrF family LPS07_04520 PF00881 Nitroreductase family LPS07_04525 PF00106 short chain dehydrogenase LPS07_04535 PF02595 Glycerate kinase family LPS07_04540 PF00384 Molybdopterin oxidoreductase LPS07_04545 PF02634 FdhD/NarQ family LPS07_04550 PF06803 Protein of unknown function (DUF1232) LPS07_04555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPS07_04555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPS07_04555 PF11890 Domain of unknown function (DUF3410) LPS07_04560 PF00152 tRNA synthetases class II (D, K and N) LPS07_04570 PF18073 Rubredoxin metal binding domain LPS07_04575 PF01235 Sodium:alanine symporter family LPS07_04580 PF00324 Amino acid permease LPS07_04590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPS07_04590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LPS07_04595 PF01678 Diaminopimelate epimerase LPS07_04600 PF01810 LysE type translocator LPS07_04605 PF02899 Phage integrase, N-terminal SAM-like domain LPS07_04605 PF00589 Phage integrase family LPS07_04610 PF01012 Electron transfer flavoprotein domain LPS07_04615 PF01012 Electron transfer flavoprotein domain LPS07_04615 PF00766 Electron transfer flavoprotein FAD-binding domain LPS07_04620 PF03989 DNA gyrase C-terminal domain, beta-propeller LPS07_04620 PF00521 DNA gyrase/topoisomerase IV, subunit A LPS07_04635 PF13533 Biotin-lipoyl like LPS07_04645 PF00266 Aminotransferase class-V LPS07_04655 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LPS07_04670 PF02687 FtsX-like permease family LPS07_04670 PF12704 MacB-like periplasmic core domain LPS07_04675 PF00005 ABC transporter LPS07_04680 PF13567 Domain of unknown function (DUF4131) LPS07_04680 PF03772 Competence protein LPS07_04680 PF00753 Metallo-beta-lactamase superfamily LPS07_04690 PF06965 Na+/H+ antiporter 1 LPS07_04690 PF01343 Peptidase family S49 LPS07_04695 PF12697 Alpha/beta hydrolase family LPS07_04700 PF00551 Formyl transferase LPS07_04705 PF00586 AIR synthase related protein, N-terminal domain LPS07_04705 PF02769 AIR synthase related protein, C-terminal domain LPS07_04710 PF01594 AI-2E family transporter LPS07_04715 PF00308 Bacterial dnaA protein LPS07_04715 PF08299 Bacterial dnaA protein helix-turn-helix LPS07_04715 PF11638 DnaA N-terminal domain LPS07_04745 PF00588 SpoU rRNA Methylase family LPS07_04745 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPS07_04750 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LPS07_04760 PF00691 OmpA family LPS07_04765 PF07676 WD40-like Beta Propeller Repeat LPS07_04765 PF04052 TolB amino-terminal domain LPS07_04775 PF02472 Biopolymer transport protein ExbD/TolR LPS07_04780 PF01618 MotA/TolQ/ExbB proton channel family LPS07_04785 PF03061 Thioesterase superfamily LPS07_04790 PF07687 Peptidase dimerisation domain LPS07_04790 PF01546 Peptidase family M20/M25/M40 LPS07_04795 PF17864 RuvB AAA lid domain LPS07_04795 PF05491 RuvB C-terminal winged helix domain LPS07_04795 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPS07_04800 PF07499 RuvA, C-terminal domain LPS07_04800 PF01330 RuvA N terminal domain LPS07_04805 PF01966 HD domain LPS07_04810 PF02769 AIR synthase related protein, C-terminal domain LPS07_04810 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPS07_04810 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPS07_04815 PF07690 Major Facilitator Superfamily LPS07_04820 PF01784 NIF3 (NGG1p interacting factor 3) LPS07_04825 PF00378 Enoyl-CoA hydratase/isomerase LPS07_04830 PF00293 NUDIX domain LPS07_04830 PF01467 Cytidylyltransferase-like LPS07_04845 PF00578 AhpC/TSA family LPS07_04860 PF06508 Queuosine biosynthesis protein QueC LPS07_04870 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_04870 PF14602 Hexapeptide repeat of succinyl-transferase LPS07_04870 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPS07_04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_04880 PF03466 LysR substrate binding domain LPS07_04885 PF00005 ABC transporter LPS07_04885 PF12857 TOBE-like domain LPS07_04890 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_04895 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_04910 PF01063 Amino-transferase class IV LPS07_04915 PF02618 YceG-like family LPS07_04920 PF02223 Thymidylate kinase LPS07_04930 PF02910 Fumarate reductase flavoprotein C-term LPS07_04930 PF00890 FAD binding domain LPS07_04935 PF13180 PDZ domain LPS07_04945 PF13302 Acetyltransferase (GNAT) domain LPS07_04950 PF03144 Elongation factor Tu domain 2 LPS07_04950 PF00679 Elongation factor G C-terminus LPS07_04950 PF06421 GTP-binding protein LepA C-terminus LPS07_04950 PF00009 Elongation factor Tu GTP binding domain LPS07_04955 PF10502 Signal peptidase, peptidase S26 LPS07_04965 PF14622 Ribonuclease-III-like LPS07_04965 PF00035 Double-stranded RNA binding motif LPS07_04970 PF07650 KH domain LPS07_04970 PF01926 50S ribosome-binding GTPase LPS07_04980 PF11967 Recombination protein O N terminal LPS07_04980 PF02565 Recombination protein O C terminal LPS07_04985 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPS07_04990 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LPS07_04995 PF00106 short chain dehydrogenase LPS07_05020 PF00892 EamA-like transporter family LPS07_05025 PF00155 Aminotransferase class I and II LPS07_05035 PF17151 Periplasmic sensor domain LPS07_05035 PF00990 Diguanylate cyclase, GGDEF domain LPS07_05045 PF17757 UvrB interaction domain LPS07_05045 PF02151 UvrB/uvrC motif LPS07_05045 PF00271 Helicase conserved C-terminal domain LPS07_05045 PF12344 Ultra-violet resistance protein B LPS07_05045 PF04851 Type III restriction enzyme, res subunit LPS07_05055 PF00892 EamA-like transporter family LPS07_05060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPS07_05060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPS07_05075 PF01018 GTP1/OBG LPS07_05075 PF01926 50S ribosome-binding GTPase LPS07_05080 PF00696 Amino acid kinase family LPS07_05080 PF01472 PUA domain LPS07_05090 PF07759 Protein of unknown function (DUF1615) LPS07_05095 PF01207 Dihydrouridine synthase (Dus) LPS07_05100 PF03060 Nitronate monooxygenase LPS07_05115 PF02350 UDP-N-acetylglucosamine 2-epimerase LPS07_05145 PF03441 FAD binding domain of DNA photolyase LPS07_05145 PF00875 DNA photolyase LPS07_05150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPS07_05155 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_05160 PF07943 Penicillin-binding protein 5, C-terminal domain LPS07_05160 PF00768 D-alanyl-D-alanine carboxypeptidase LPS07_05170 PF03971 Monomeric isocitrate dehydrogenase LPS07_05175 PF00849 RNA pseudouridylate synthase LPS07_05180 PF00180 Isocitrate/isopropylmalate dehydrogenase LPS07_05190 PF06779 Uncharacterised MFS-type transporter YbfB LPS07_05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_05195 PF03466 LysR substrate binding domain LPS07_05200 PF00375 Sodium:dicarboxylate symporter family LPS07_05205 PF02567 Phenazine biosynthesis-like protein LPS07_05210 PF00675 Insulinase (Peptidase family M16) LPS07_05210 PF05193 Peptidase M16 inactive domain LPS07_05245 PF02581 Thiamine monophosphate synthase LPS07_05250 PF00202 Aminotransferase class-III LPS07_05260 PF00849 RNA pseudouridylate synthase LPS07_05265 PF00176 SNF2 family N-terminal domain LPS07_05265 PF18339 RapA N-terminal Tudor like domain 1 LPS07_05265 PF18337 RapA N-terminal Tudor like domain LPS07_05265 PF00271 Helicase conserved C-terminal domain LPS07_05265 PF12137 RNA polymerase recycling family C-terminal LPS07_05275 PF00440 Bacterial regulatory proteins, tetR family LPS07_05280 PF00970 Oxidoreductase FAD-binding domain LPS07_05280 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_05280 PF00175 Oxidoreductase NAD-binding domain LPS07_05285 PF00487 Fatty acid desaturase LPS07_05295 PF00202 Aminotransferase class-III LPS07_05300 PF00282 Pyridoxal-dependent decarboxylase conserved domain LPS07_05305 PF00171 Aldehyde dehydrogenase family LPS07_05310 PF01037 Lrp/AsnC ligand binding domain LPS07_05315 PF00205 Thiamine pyrophosphate enzyme, central domain LPS07_05315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPS07_05315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPS07_05320 PF00324 Amino acid permease LPS07_05325 PF12849 PBP superfamily domain LPS07_05330 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_05335 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_05340 PF00005 ABC transporter LPS07_05345 PF08496 Peptidase family S49 N-terminal LPS07_05345 PF01343 Peptidase family S49 LPS07_05360 PF00206 Lyase LPS07_05360 PF08328 Adenylosuccinate lyase C-terminal LPS07_05365 PF04356 Protein of unknown function (DUF489) LPS07_05375 PF00293 NUDIX domain LPS07_05375 PF13344 Haloacid dehalogenase-like hydrolase LPS07_05385 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_05390 PF00768 D-alanyl-D-alanine carboxypeptidase LPS07_05390 PF07943 Penicillin-binding protein 5, C-terminal domain LPS07_05480 PF03796 DnaB-like helicase C terminal domain LPS07_05480 PF00772 DnaB-like helicase N terminal domain LPS07_05740 PF00817 impB/mucB/samB family LPS07_05740 PF13438 Domain of unknown function (DUF4113) LPS07_05740 PF11799 impB/mucB/samB family C-terminal domain LPS07_05745 PF13356 Arm DNA-binding domain LPS07_05745 PF14659 Phage integrase, N-terminal SAM-like domain LPS07_05745 PF00589 Phage integrase family LPS07_05750 PF01975 Survival protein SurE LPS07_05755 PF01551 Peptidase family M23 LPS07_05755 PF01476 LysM domain LPS07_05760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_05760 PF03466 LysR substrate binding domain LPS07_05765 PF13654 AAA domain LPS07_05765 PF05362 Lon protease (S16) C-terminal proteolytic domain LPS07_05770 PF07690 Major Facilitator Superfamily LPS07_05775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPS07_05780 PF13593 SBF-like CPA transporter family (DUF4137) LPS07_05785 PF01197 Ribosomal protein L31 LPS07_05800 PF04055 Radical SAM superfamily LPS07_05805 PF09285 Elongation factor P, C-terminal LPS07_05805 PF01132 Elongation factor P (EF-P) OB domain LPS07_05805 PF08207 Elongation factor P (EF-P) KOW-like domain LPS07_05810 PF13722 5TM C-terminal transporter carbon starvation CstA LPS07_05810 PF02554 Carbon starvation protein CstA LPS07_05815 PF04328 Selenoprotein, putative LPS07_05825 PF00589 Phage integrase family LPS07_05910 PF03354 Phage Terminase LPS07_05915 PF04860 Phage portal protein LPS07_06030 PF13438 Domain of unknown function (DUF4113) LPS07_06030 PF11799 impB/mucB/samB family C-terminal domain LPS07_06030 PF11798 IMS family HHH motif LPS07_06030 PF00817 impB/mucB/samB family LPS07_06035 PF13356 Arm DNA-binding domain LPS07_06035 PF00589 Phage integrase family LPS07_06065 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPS07_06080 PF02796 Helix-turn-helix domain of resolvase LPS07_06080 PF00239 Resolvase, N terminal domain LPS07_06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_06125 PF03466 LysR substrate binding domain LPS07_06145 PF00883 Cytosol aminopeptidase family, catalytic domain LPS07_06145 PF02789 Cytosol aminopeptidase family, N-terminal domain LPS07_06150 PF02678 Pirin LPS07_06150 PF17954 Quercetinase C-terminal cupin domain LPS07_06160 PF00550 Phosphopantetheine attachment site LPS07_06160 PF00668 Condensation domain LPS07_06160 PF13193 AMP-binding enzyme C-terminal domain LPS07_06160 PF00501 AMP-binding enzyme LPS07_06165 PF13193 AMP-binding enzyme C-terminal domain LPS07_06165 PF00668 Condensation domain LPS07_06165 PF00550 Phosphopantetheine attachment site LPS07_06165 PF00975 Thioesterase domain LPS07_06165 PF00501 AMP-binding enzyme LPS07_06170 PF01032 FecCD transport family LPS07_06175 PF01032 FecCD transport family LPS07_06180 PF00005 ABC transporter LPS07_06185 PF01497 Periplasmic binding protein LPS07_06190 PF07715 TonB-dependent Receptor Plug Domain LPS07_06190 PF00593 TonB dependent receptor LPS07_06195 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LPS07_06200 PF00501 AMP-binding enzyme LPS07_06200 PF00668 Condensation domain LPS07_06200 PF00550 Phosphopantetheine attachment site LPS07_06205 PF13193 AMP-binding enzyme C-terminal domain LPS07_06205 PF00501 AMP-binding enzyme LPS07_06210 PF00857 Isochorismatase family LPS07_06210 PF00550 Phosphopantetheine attachment site LPS07_06215 PF00282 Pyridoxal-dependent decarboxylase conserved domain LPS07_06220 PF00664 ABC transporter transmembrane region LPS07_06220 PF00005 ABC transporter LPS07_06225 PF00005 ABC transporter LPS07_06230 PF00975 Thioesterase domain LPS07_06240 PF00425 chorismate binding enzyme LPS07_06250 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPS07_06255 PF05675 Protein of unknown function (DUF817) LPS07_06270 PF00144 Beta-lactamase LPS07_06275 PF01227 GTP cyclohydrolase I LPS07_06280 PF01799 [2Fe-2S] binding domain LPS07_06280 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_06285 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LPS07_06285 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LPS07_06295 PF01713 Smr domain LPS07_06300 PF00218 Indole-3-glycerol phosphate synthase LPS07_06305 PF02885 Glycosyl transferase family, helical bundle domain LPS07_06305 PF00591 Glycosyl transferase family, a/b domain LPS07_06310 PF00593 TonB dependent receptor LPS07_06310 PF07715 TonB-dependent Receptor Plug Domain LPS07_06315 PF01433 Peptidase family M1 domain LPS07_06315 PF11838 ERAP1-like C-terminal domain LPS07_06320 PF00117 Glutamine amidotransferase class-I LPS07_06335 PF00854 POT family LPS07_06340 PF03951 Glutamine synthetase, beta-Grasp domain LPS07_06340 PF00120 Glutamine synthetase, catalytic domain LPS07_06345 PF04345 Chorismate lyase LPS07_06350 PF01040 UbiA prenyltransferase family LPS07_06385 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPS07_06385 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPS07_06390 PF01784 NIF3 (NGG1p interacting factor 3) LPS07_06395 PF13180 PDZ domain LPS07_06400 PF01743 Poly A polymerase head domain LPS07_06400 PF12627 Probable RNA and SrmB- binding site of polymerase A LPS07_06405 PF01515 Phosphate acetyl/butaryl transferase LPS07_06405 PF00390 Malic enzyme, N-terminal domain LPS07_06405 PF03949 Malic enzyme, NAD binding domain LPS07_06410 PF00990 Diguanylate cyclase, GGDEF domain LPS07_06410 PF03707 Bacterial signalling protein N terminal repeat LPS07_06410 PF00563 EAL domain LPS07_06415 PF04452 RNA methyltransferase LPS07_06420 PF02219 Methylenetetrahydrofolate reductase LPS07_06425 PF05221 S-adenosyl-L-homocysteine hydrolase LPS07_06425 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPS07_06440 PF09317 Domain of unknown function (DUF1974) LPS07_06440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_06440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_06445 PF04055 Radical SAM superfamily LPS07_06450 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_06450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPS07_06460 PF07690 Major Facilitator Superfamily LPS07_06470 PF00557 Metallopeptidase family M24 LPS07_06475 PF00318 Ribosomal protein S2 LPS07_06480 PF00889 Elongation factor TS LPS07_06490 PF12833 Helix-turn-helix domain LPS07_06510 PF03330 Lytic transglycolase LPS07_06510 PF05036 Sporulation related domain LPS07_06515 PF13406 Transglycosylase SLT domain LPS07_06520 PF01098 Cell cycle protein LPS07_06530 PF14489 QueF-like protein LPS07_06530 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPS07_06535 PF01061 ABC-2 type transporter LPS07_06540 PF00005 ABC transporter LPS07_06570 PF00464 Serine hydroxymethyltransferase LPS07_06580 PF00873 AcrB/AcrD/AcrF family LPS07_06585 PF13533 Biotin-lipoyl like LPS07_06590 PF03466 LysR substrate binding domain LPS07_06590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_06595 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPS07_06600 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_06605 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_06610 PF00005 ABC transporter LPS07_06615 PF00893 Small Multidrug Resistance protein LPS07_06620 PF00037 4Fe-4S binding domain LPS07_06625 PF01136 Peptidase family U32 LPS07_06625 PF16325 Peptidase family U32 C-terminal domain LPS07_06630 PF00155 Aminotransferase class I and II LPS07_06630 PF00392 Bacterial regulatory proteins, gntR family LPS07_06635 PF02567 Phenazine biosynthesis-like protein LPS07_06640 PF00970 Oxidoreductase FAD-binding domain LPS07_06640 PF00175 Oxidoreductase NAD-binding domain LPS07_06645 PF18389 TrmO C-terminal domain LPS07_06645 PF01980 tRNA-methyltransferase O LPS07_06655 PF00437 Type II/IV secretion system protein LPS07_06655 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPS07_06665 PF00072 Response regulator receiver domain LPS07_06665 PF00486 Transcriptional regulatory protein, C terminal LPS07_06670 PF08521 Two-component sensor kinase N-terminal LPS07_06670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_06670 PF00512 His Kinase A (phospho-acceptor) domain LPS07_06680 PF00293 NUDIX domain LPS07_06690 PF00912 Transglycosylase LPS07_06690 PF00905 Penicillin binding protein transpeptidase domain LPS07_06690 PF14814 Bifunctional transglycosylase second domain LPS07_06695 PF01513 ATP-NAD kinase LPS07_06700 PF07023 Protein of unknown function (DUF1315) LPS07_06705 PF02885 Glycosyl transferase family, helical bundle domain LPS07_06705 PF00591 Glycosyl transferase family, a/b domain LPS07_06710 PF00375 Sodium:dicarboxylate symporter family LPS07_06715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_06715 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_06715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_06725 PF01842 ACT domain LPS07_06725 PF01817 Chorismate mutase type II LPS07_06725 PF00800 Prephenate dehydratase LPS07_06730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPS07_06740 PF07687 Peptidase dimerisation domain LPS07_06740 PF01546 Peptidase family M20/M25/M40 LPS07_06745 PF01137 RNA 3'-terminal phosphate cyclase LPS07_06745 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain LPS07_06760 PF01139 tRNA-splicing ligase RtcB LPS07_06770 PF06956 Regulator of RNA terminal phosphate cyclase LPS07_06770 PF00158 Sigma-54 interaction domain LPS07_06780 PF03883 Peroxide stress protein YaaA LPS07_06790 PF05690 Thiazole biosynthesis protein ThiG LPS07_06800 PF04241 Protein of unknown function (DUF423) LPS07_06805 PF04542 Sigma-70 region 2 LPS07_06805 PF00140 Sigma-70 factor, region 1.2 LPS07_06805 PF04545 Sigma-70, region 4 LPS07_06820 PF00313 'Cold-shock' DNA-binding domain LPS07_06825 PF00271 Helicase conserved C-terminal domain LPS07_06825 PF00270 DEAD/DEAH box helicase LPS07_06835 PF00881 Nitroreductase family LPS07_06840 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPS07_06840 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPS07_06860 PF01180 Dihydroorotate dehydrogenase LPS07_06865 PF02674 Colicin V production protein LPS07_06870 PF00156 Phosphoribosyl transferase domain LPS07_06885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPS07_06885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPS07_06890 PF01435 Peptidase family M48 LPS07_06895 PF09424 Yqey-like protein LPS07_06900 PF01165 Ribosomal protein S21 LPS07_06905 PF00814 Glycoprotease family LPS07_06925 PF00069 Protein kinase domain LPS07_06925 PF03793 PASTA domain LPS07_06950 PF00313 'Cold-shock' DNA-binding domain LPS07_06965 PF00561 alpha/beta hydrolase fold LPS07_06970 PF03616 Sodium/glutamate symporter LPS07_06975 PF02254 TrkA-N domain LPS07_06975 PF00999 Sodium/hydrogen exchanger family LPS07_07035 PF13276 HTH-like domain LPS07_07035 PF00665 Integrase core domain LPS07_07035 PF13333 Integrase core domain LPS07_07045 PF00440 Bacterial regulatory proteins, tetR family LPS07_07050 PF00155 Aminotransferase class I and II LPS07_07055 PF02080 TrkA-C domain LPS07_07055 PF06826 Predicted Permease Membrane Region LPS07_07065 PF04403 Paraquat-inducible protein A LPS07_07070 PF02470 MlaD protein LPS07_07080 PF00576 HIUase/Transthyretin family LPS07_07090 PF00072 Response regulator receiver domain LPS07_07090 PF00486 Transcriptional regulatory protein, C terminal LPS07_07095 PF00512 His Kinase A (phospho-acceptor) domain LPS07_07095 PF00672 HAMP domain LPS07_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_07135 PF00512 His Kinase A (phospho-acceptor) domain LPS07_07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_07135 PF08521 Two-component sensor kinase N-terminal LPS07_07140 PF00072 Response regulator receiver domain LPS07_07140 PF00486 Transcriptional regulatory protein, C terminal LPS07_07160 PF01177 Asp/Glu/Hydantoin racemase LPS07_07165 PF08240 Alcohol dehydrogenase GroES-like domain LPS07_07165 PF00107 Zinc-binding dehydrogenase LPS07_07170 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LPS07_07175 PF05853 beta-keto acid cleavage enzyme LPS07_07180 PF07690 Major Facilitator Superfamily LPS07_07195 PF03601 Conserved hypothetical protein 698 LPS07_07220 PF07995 Glucose / Sorbosone dehydrogenase LPS07_07240 PF00375 Sodium:dicarboxylate symporter family LPS07_07250 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPS07_07250 PF00753 Metallo-beta-lactamase superfamily LPS07_07255 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_07260 PF00005 ABC transporter LPS07_07260 PF09383 NIL domain LPS07_07265 PF03180 NLPA lipoprotein LPS07_07270 PF02844 Phosphoribosylglycinamide synthetase, N domain LPS07_07270 PF02843 Phosphoribosylglycinamide synthetase, C domain LPS07_07270 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPS07_07275 PF01808 AICARFT/IMPCHase bienzyme LPS07_07275 PF02142 MGS-like domain LPS07_07280 PF02954 Bacterial regulatory protein, Fis family LPS07_07300 PF13932 GidA associated domain LPS07_07300 PF01134 Glucose inhibited division protein A LPS07_07310 PF14403 Circularly permuted ATP-grasp type 2 LPS07_07320 PF01841 Transglutaminase-like superfamily LPS07_07320 PF08379 Bacterial transglutaminase-like N-terminal region LPS07_07330 PF00842 Alanine racemase, C-terminal domain LPS07_07330 PF01168 Alanine racemase, N-terminal domain LPS07_07335 PF03796 DnaB-like helicase C terminal domain LPS07_07335 PF00772 DnaB-like helicase N terminal domain LPS07_07340 PF03948 Ribosomal protein L9, C-terminal domain LPS07_07340 PF01281 Ribosomal protein L9, N-terminal domain LPS07_07345 PF01084 Ribosomal protein S18 LPS07_07350 PF01250 Ribosomal protein S6 LPS07_07355 PF01040 UbiA prenyltransferase family LPS07_07360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPS07_07365 PF00510 Cytochrome c oxidase subunit III LPS07_07370 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPS07_07375 PF06481 COX Aromatic Rich Motif LPS07_07375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPS07_07385 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPS07_07385 PF02896 PEP-utilising enzyme, TIM barrel domain LPS07_07385 PF00391 PEP-utilising enzyme, mobile domain LPS07_07390 PF03618 Kinase/pyrophosphorylase LPS07_07400 PF01522 Polysaccharide deacetylase LPS07_07400 PF14883 Hypothetical glycosyl hydrolase family 13 LPS07_07405 PF00535 Glycosyl transferase family 2 LPS07_07410 PF13994 PgaD-like protein LPS07_07420 PF00296 Luciferase-like monooxygenase LPS07_07435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_07435 PF03466 LysR substrate binding domain LPS07_07445 PF03462 PCRF domain LPS07_07445 PF00472 RF-1 domain LPS07_07450 PF17827 PrmC N-terminal domain LPS07_07450 PF13847 Methyltransferase domain LPS07_07455 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_07460 PF09084 NMT1/THI5 like LPS07_07470 PF00106 short chain dehydrogenase LPS07_07475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_07475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_07475 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_07480 PF01613 Flavin reductase like domain LPS07_07485 PF00581 Rhodanese-like domain LPS07_07485 PF00899 ThiF family LPS07_07490 PF03109 ABC1 family LPS07_07505 PF03814 Potassium-transporting ATPase A subunit LPS07_07515 PF02669 K+-transporting ATPase, c chain LPS07_07520 PF00512 His Kinase A (phospho-acceptor) domain LPS07_07520 PF02702 Osmosensitive K+ channel His kinase sensor domain LPS07_07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_07520 PF13493 Domain of unknown function (DUF4118) LPS07_07525 PF00072 Response regulator receiver domain LPS07_07525 PF00486 Transcriptional regulatory protein, C terminal LPS07_07530 PF00120 Glutamine synthetase, catalytic domain LPS07_07540 PF03232 Ubiquinone biosynthesis protein COQ7 LPS07_07545 PF07690 Major Facilitator Superfamily LPS07_07550 PF17243 POTRA domain TamA domain 1 LPS07_07550 PF07244 Surface antigen variable number repeat LPS07_07550 PF01103 Surface antigen LPS07_07570 PF11791 Aconitate B N-terminal domain LPS07_07570 PF06434 Aconitate hydratase 2 N-terminus LPS07_07570 PF00330 Aconitase family (aconitate hydratase) LPS07_07580 PF00520 Ion transport protein LPS07_07580 PF00027 Cyclic nucleotide-binding domain LPS07_07585 PF07690 Major Facilitator Superfamily LPS07_07595 PF03466 LysR substrate binding domain LPS07_07595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_07600 PF04284 Protein of unknown function (DUF441) LPS07_07610 PF00849 RNA pseudouridylate synthase LPS07_07610 PF01479 S4 domain LPS07_07625 PF01479 S4 domain LPS07_07625 PF00849 RNA pseudouridylate synthase LPS07_07630 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPS07_07635 PF08676 MutL C terminal dimerisation domain LPS07_07635 PF01119 DNA mismatch repair protein, C-terminal domain LPS07_07645 PF17209 Hfq protein LPS07_07655 PF00881 Nitroreductase family LPS07_07665 PF00149 Calcineurin-like phosphoesterase LPS07_07670 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPS07_07675 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPS07_07675 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPS07_07680 PF00117 Glutamine amidotransferase class-I LPS07_07680 PF02540 NAD synthase LPS07_07680 PF00958 GMP synthase C terminal domain LPS07_07685 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LPS07_07690 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LPS07_07695 PF13520 Amino acid permease LPS07_07700 PF00171 Aldehyde dehydrogenase family LPS07_07715 PF00465 Iron-containing alcohol dehydrogenase LPS07_07720 PF05970 PIF1-like helicase LPS07_07720 PF14493 Helix-turn-helix domain LPS07_07730 PF02110 Hydroxyethylthiazole kinase family LPS07_07745 PF11940 Domain of unknown function (DUF3458) Ig-like fold LPS07_07745 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LPS07_07745 PF01433 Peptidase family M1 domain LPS07_07760 PF13954 PapC N-terminal domain LPS07_07760 PF00577 Outer membrane usher protein LPS07_07760 PF13953 PapC C-terminal domain LPS07_07785 PF01817 Chorismate mutase type II LPS07_07800 PF00593 TonB dependent receptor LPS07_07800 PF07660 Secretin and TonB N terminus short domain LPS07_07800 PF07715 TonB-dependent Receptor Plug Domain LPS07_07805 PF00593 TonB dependent receptor LPS07_07805 PF07715 TonB-dependent Receptor Plug Domain LPS07_07810 PF18331 PKHD-type hydroxylase C-terminal domain LPS07_07810 PF13640 2OG-Fe(II) oxygenase superfamily LPS07_07825 PF00117 Glutamine amidotransferase class-I LPS07_07860 PF00959 Phage lysozyme LPS07_07885 PF03466 LysR substrate binding domain LPS07_07885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_07915 PF04151 Bacterial pre-peptidase C-terminal domain LPS07_07920 PF00005 ABC transporter LPS07_07920 PF12848 ABC transporter LPS07_07925 PF00582 Universal stress protein family LPS07_07945 PF03594 Benzoate membrane transport protein LPS07_07950 PF01037 Lrp/AsnC ligand binding domain LPS07_07955 PF01810 LysE type translocator LPS07_07960 PF00923 Transaldolase/Fructose-6-phosphate aldolase LPS07_07965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_07965 PF03466 LysR substrate binding domain LPS07_07975 PF00108 Thiolase, N-terminal domain LPS07_07975 PF02803 Thiolase, C-terminal domain LPS07_07985 PF01575 MaoC like domain LPS07_08000 PF07690 Major Facilitator Superfamily LPS07_08015 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LPS07_08015 PF12169 DNA polymerase III subunits gamma and tau domain III LPS07_08015 PF12170 DNA polymerase III tau subunit V interacting with alpha LPS07_08025 PF05506 Domain of unknown function (DUF756) LPS07_08025 PF04185 Phosphoesterase family LPS07_08030 PF03061 Thioesterase superfamily LPS07_08035 PF00465 Iron-containing alcohol dehydrogenase LPS07_08050 PF01638 HxlR-like helix-turn-helix LPS07_08060 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPS07_08065 PF01565 FAD binding domain LPS07_08065 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPS07_08090 PF01645 Conserved region in glutamate synthase LPS07_08105 PF13954 PapC N-terminal domain LPS07_08105 PF13953 PapC C-terminal domain LPS07_08105 PF00577 Outer membrane usher protein LPS07_08115 PF12832 MFS_1 like family LPS07_08125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPS07_08125 PF02785 Biotin carboxylase C-terminal domain LPS07_08125 PF00289 Biotin carboxylase, N-terminal domain LPS07_08130 PF00364 Biotin-requiring enzyme LPS07_08135 PF01220 Dehydroquinase class II LPS07_08145 PF00593 TonB dependent receptor LPS07_08145 PF07715 TonB-dependent Receptor Plug Domain LPS07_08150 PF03328 HpcH/HpaI aldolase/citrate lyase family LPS07_08155 PF04183 IucA / IucC family LPS07_08155 PF06276 Ferric iron reductase FhuF-like transporter LPS07_08160 PF07690 Major Facilitator Superfamily LPS07_08165 PF06276 Ferric iron reductase FhuF-like transporter LPS07_08165 PF04183 IucA / IucC family LPS07_08170 PF02423 Ornithine cyclodeaminase/mu-crystallin family LPS07_08175 PF00291 Pyridoxal-phosphate dependent enzyme LPS07_08185 PF00005 ABC transporter LPS07_08200 PF13806 Rieske-like [2Fe-2S] domain LPS07_08200 PF18267 Rubredoxin NAD+ reductase C-terminal domain LPS07_08200 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_08200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPS07_08200 PF04324 BFD-like [2Fe-2S] binding domain LPS07_08200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPS07_08205 PF18267 Rubredoxin NAD+ reductase C-terminal domain LPS07_08205 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_08205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPS07_08205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPS07_08205 PF04324 BFD-like [2Fe-2S] binding domain LPS07_08210 PF04324 BFD-like [2Fe-2S] binding domain LPS07_08210 PF01568 Molydopterin dinucleotide binding domain LPS07_08210 PF00384 Molybdopterin oxidoreductase LPS07_08210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LPS07_08215 PF12804 MobA-like NTP transferase domain LPS07_08220 PF00384 Molybdopterin oxidoreductase LPS07_08220 PF01568 Molydopterin dinucleotide binding domain LPS07_08220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LPS07_08225 PF04055 Radical SAM superfamily LPS07_08225 PF06463 Molybdenum Cofactor Synthesis C LPS07_08235 PF02391 MoaE protein LPS07_08240 PF00994 Probable molybdopterin binding domain LPS07_08240 PF01967 MoaC family LPS07_08245 PF03453 MoeA N-terminal region (domain I and II) LPS07_08245 PF03454 MoeA C-terminal region (domain IV) LPS07_08245 PF00994 Probable molybdopterin binding domain LPS07_08250 PF01638 HxlR-like helix-turn-helix LPS07_08255 PF00392 Bacterial regulatory proteins, gntR family LPS07_08255 PF00155 Aminotransferase class I and II LPS07_08260 PF00892 EamA-like transporter family LPS07_08280 PF02635 DsrE/DsrF-like family LPS07_08285 PF16363 GDP-mannose 4,6 dehydratase LPS07_08290 PF00206 Lyase LPS07_08290 PF10415 Fumarase C C-terminus LPS07_08305 PF00561 alpha/beta hydrolase fold LPS07_08325 PF01266 FAD dependent oxidoreductase LPS07_08335 PF02542 YgbB family LPS07_08345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPS07_08345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPS07_08355 PF02954 Bacterial regulatory protein, Fis family LPS07_08355 PF00072 Response regulator receiver domain LPS07_08355 PF00158 Sigma-54 interaction domain LPS07_08360 PF00989 PAS fold LPS07_08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_08360 PF00512 His Kinase A (phospho-acceptor) domain LPS07_08370 PF00919 Uncharacterized protein family UPF0004 LPS07_08370 PF04055 Radical SAM superfamily LPS07_08370 PF18693 TRAM domain LPS07_08375 PF00696 Amino acid kinase family LPS07_08380 PF01765 Ribosome recycling factor LPS07_08385 PF01255 Putative undecaprenyl diphosphate synthase LPS07_08395 PF13288 DXP reductoisomerase C-terminal domain LPS07_08395 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPS07_08395 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPS07_08400 PF13180 PDZ domain LPS07_08400 PF02163 Peptidase family M50 LPS07_08400 PF17820 PDZ domain LPS07_08405 PF01103 Surface antigen LPS07_08405 PF07244 Surface antigen variable number repeat LPS07_08415 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_08415 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPS07_08420 PF07977 FabA-like domain LPS07_08425 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPS07_08425 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_08440 PF02631 RecX family LPS07_08445 PF00154 recA bacterial DNA recombination protein LPS07_08450 PF01479 S4 domain LPS07_08455 PF13419 Haloacid dehalogenase-like hydrolase LPS07_08470 PF01037 Lrp/AsnC ligand binding domain LPS07_08475 PF00266 Aminotransferase class-V LPS07_08480 PF00324 Amino acid permease LPS07_08495 PF05922 Peptidase inhibitor I9 LPS07_08495 PF00082 Subtilase family LPS07_08500 PF01740 STAS domain LPS07_08500 PF00916 Sulfate permease family LPS07_08510 PF07995 Glucose / Sorbosone dehydrogenase LPS07_08520 PF03707 Bacterial signalling protein N terminal repeat LPS07_08520 PF00990 Diguanylate cyclase, GGDEF domain LPS07_08520 PF00563 EAL domain LPS07_08535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LPS07_08535 PF02378 Phosphotransferase system, EIIC LPS07_08540 PF00294 pfkB family carbohydrate kinase LPS07_08545 PF00381 PTS HPr component phosphorylation site LPS07_08545 PF05524 PEP-utilising enzyme, N-terminal LPS07_08545 PF00391 PEP-utilising enzyme, mobile domain LPS07_08545 PF02896 PEP-utilising enzyme, TIM barrel domain LPS07_08545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LPS07_08565 PF03928 Haem-degrading LPS07_08570 PF05525 Branched-chain amino acid transport protein LPS07_08575 PF00557 Metallopeptidase family M24 LPS07_08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_08580 PF03466 LysR substrate binding domain LPS07_08590 PF00462 Glutaredoxin LPS07_08595 PF00202 Aminotransferase class-III LPS07_08600 PF00571 CBS domain LPS07_08600 PF00478 IMP dehydrogenase / GMP reductase domain LPS07_08625 PF00448 SRP54-type protein, GTPase domain LPS07_08625 PF02881 SRP54-type protein, helical bundle domain LPS07_08650 PF08173 Membrane bound YbgT-like protein LPS07_08655 PF02322 Cytochrome bd terminal oxidase subunit II LPS07_08660 PF01654 Cytochrome bd terminal oxidase subunit I LPS07_08670 PF07290 Protein of unknown function (DUF1449) LPS07_08680 PF00294 pfkB family carbohydrate kinase LPS07_08685 PF00675 Insulinase (Peptidase family M16) LPS07_08685 PF05193 Peptidase M16 inactive domain LPS07_08685 PF08367 Peptidase M16C associated LPS07_08690 PF02253 Phospholipase A1 LPS07_08695 PF02386 Cation transport protein LPS07_08700 PF02080 TrkA-C domain LPS07_08700 PF02254 TrkA-N domain LPS07_08705 PF00291 Pyridoxal-phosphate dependent enzyme LPS07_08705 PF00585 C-terminal regulatory domain of Threonine dehydratase LPS07_08710 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPS07_08725 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPS07_08725 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPS07_08735 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPS07_08740 PF07724 AAA domain (Cdc48 subfamily) LPS07_08740 PF00004 ATPase family associated with various cellular activities (AAA) LPS07_08740 PF10431 C-terminal, D2-small domain, of ClpB protein LPS07_08740 PF02861 Clp amino terminal domain, pathogenicity island component LPS07_08740 PF17871 AAA lid domain LPS07_08745 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LPS07_08750 PF00793 DAHP synthetase I family LPS07_08765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPS07_08765 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_08795 PF06418 CTP synthase N-terminus LPS07_08795 PF00117 Glutamine amidotransferase class-I LPS07_08800 PF00793 DAHP synthetase I family LPS07_08805 PF00113 Enolase, C-terminal TIM barrel domain LPS07_08805 PF03952 Enolase, N-terminal domain LPS07_08810 PF04239 Protein of unknown function (DUF421) LPS07_08820 PF07715 TonB-dependent Receptor Plug Domain LPS07_08820 PF00593 TonB dependent receptor LPS07_08825 PF04977 Septum formation initiator LPS07_08830 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPS07_08835 PF01144 Coenzyme A transferase LPS07_08840 PF01144 Coenzyme A transferase LPS07_08845 PF00108 Thiolase, N-terminal domain LPS07_08845 PF02803 Thiolase, C-terminal domain LPS07_08850 PF00206 Lyase LPS07_08850 PF10397 Adenylosuccinate lyase C-terminus LPS07_08855 PF00561 alpha/beta hydrolase fold LPS07_08860 PF07690 Major Facilitator Superfamily LPS07_08865 PF02627 Carboxymuconolactone decarboxylase family LPS07_08870 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LPS07_08870 PF00775 Dioxygenase LPS07_08875 PF00775 Dioxygenase LPS07_08880 PF01487 Type I 3-dehydroquinase LPS07_08885 PF05048 Periplasmic copper-binding protein (NosD) LPS07_08890 PF04966 Carbohydrate-selective porin, OprB family LPS07_08895 PF01011 PQQ enzyme repeat LPS07_08895 PF13360 PQQ-like domain LPS07_08905 PF04143 Sulphur transport LPS07_08915 PF00753 Metallo-beta-lactamase superfamily LPS07_08920 PF09339 IclR helix-turn-helix domain LPS07_08920 PF01614 Bacterial transcriptional regulator LPS07_08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_08925 PF03466 LysR substrate binding domain LPS07_08930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_08930 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_08930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_08945 PF00106 short chain dehydrogenase LPS07_08955 PF07690 Major Facilitator Superfamily LPS07_08965 PF01425 Amidase LPS07_08970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LPS07_08985 PF00355 Rieske [2Fe-2S] domain LPS07_08985 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LPS07_09000 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_09000 PF00175 Oxidoreductase NAD-binding domain LPS07_09005 PF01613 Flavin reductase like domain LPS07_09010 PF02311 AraC-like ligand binding domain LPS07_09010 PF12833 Helix-turn-helix domain LPS07_09015 PF01179 Copper amine oxidase, enzyme domain LPS07_09015 PF07833 Copper amine oxidase N-terminal domain LPS07_09015 PF02728 Copper amine oxidase, N3 domain LPS07_09015 PF02727 Copper amine oxidase, N2 domain LPS07_09025 PF00171 Aldehyde dehydrogenase family LPS07_09030 PF12146 Serine aminopeptidase, S33 LPS07_09035 PF02803 Thiolase, C-terminal domain LPS07_09035 PF00108 Thiolase, N-terminal domain LPS07_09040 PF01144 Coenzyme A transferase LPS07_09045 PF01144 Coenzyme A transferase LPS07_09050 PF00775 Dioxygenase LPS07_09050 PF04444 Catechol dioxygenase N terminus LPS07_09055 PF02426 Muconolactone delta-isomerase LPS07_09060 PF13378 Enolase C-terminal domain-like LPS07_09060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LPS07_09065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_09065 PF03466 LysR substrate binding domain LPS07_09075 PF07729 FCD domain LPS07_09075 PF00392 Bacterial regulatory proteins, gntR family LPS07_09080 PF00920 Dehydratase family LPS07_09085 PF07690 Major Facilitator Superfamily LPS07_09095 PF00171 Aldehyde dehydrogenase family LPS07_09100 PF00576 HIUase/Transthyretin family LPS07_09105 PF00860 Permease family LPS07_09115 PF01494 FAD binding domain LPS07_09120 PF07729 FCD domain LPS07_09120 PF00392 Bacterial regulatory proteins, gntR family LPS07_09130 PF09084 NMT1/THI5 like LPS07_09135 PF00005 ABC transporter LPS07_09140 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_09145 PF01979 Amidohydrolase family LPS07_09155 PF00561 alpha/beta hydrolase fold LPS07_09160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPS07_09160 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_09165 PF00106 short chain dehydrogenase LPS07_09170 PF00376 MerR family regulatory protein LPS07_09170 PF09278 MerR, DNA binding LPS07_09180 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_09195 PF12706 Beta-lactamase superfamily domain LPS07_09200 PF00440 Bacterial regulatory proteins, tetR family LPS07_09200 PF08359 YsiA-like protein, C-terminal region LPS07_09205 PF03466 LysR substrate binding domain LPS07_09205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_09220 PF00106 short chain dehydrogenase LPS07_09225 PF01575 MaoC like domain LPS07_09230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_09230 PF12806 Acetyl-CoA dehydrogenase C-terminal like LPS07_09230 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_09230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_09240 PF00501 AMP-binding enzyme LPS07_09240 PF13193 AMP-binding enzyme C-terminal domain LPS07_09270 PF01844 HNH endonuclease LPS07_09275 PF00293 NUDIX domain LPS07_09300 PF03466 LysR substrate binding domain LPS07_09300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_09320 PF07690 Major Facilitator Superfamily LPS07_09325 PF01842 ACT domain LPS07_09325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPS07_09325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPS07_09330 PF03737 Aldolase/RraA LPS07_09345 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPS07_09345 PF17287 POTRA domain LPS07_09345 PF08479 POTRA domain, ShlB-type LPS07_09350 PF13018 Extended Signal Peptide of Type V secretion system LPS07_09350 PF05860 haemagglutination activity domain LPS07_09350 PF04829 Pre-toxin domain with VENN motif LPS07_09350 PF13332 Hemagglutinin repeat LPS07_09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_09360 PF03466 LysR substrate binding domain LPS07_09365 PF00202 Aminotransferase class-III LPS07_09370 PF00171 Aldehyde dehydrogenase family LPS07_09375 PF00324 Amino acid permease LPS07_09380 PF13533 Biotin-lipoyl like LPS07_09395 PF00171 Aldehyde dehydrogenase family LPS07_09400 PF00920 Dehydratase family LPS07_09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_09410 PF03466 LysR substrate binding domain LPS07_09415 PF01370 NAD dependent epimerase/dehydratase family LPS07_09420 PF07690 Major Facilitator Superfamily LPS07_09425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LPS07_09425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LPS07_09440 PF01032 FecCD transport family LPS07_09445 PF00005 ABC transporter LPS07_09460 PF14572 Phosphoribosyl synthetase-associated domain LPS07_09460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPS07_09465 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPS07_09480 PF13533 Biotin-lipoyl like LPS07_09485 PF07690 Major Facilitator Superfamily LPS07_09510 PF01975 Survival protein SurE LPS07_09520 PF04607 Region found in RelA / SpoT proteins LPS07_09520 PF13291 ACT domain LPS07_09520 PF02824 TGS domain LPS07_09535 PF13673 Acetyltransferase (GNAT) domain LPS07_09620 PF16970 Type-1 fimbrial protein, A LPS07_09625 PF02753 Pili assembly chaperone PapD, C-terminal domain LPS07_09625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPS07_09630 PF13953 PapC C-terminal domain LPS07_09630 PF13954 PapC N-terminal domain LPS07_09630 PF00577 Outer membrane usher protein LPS07_09635 PF00419 Fimbrial protein LPS07_09645 PF00107 Zinc-binding dehydrogenase LPS07_09645 PF08240 Alcohol dehydrogenase GroES-like domain LPS07_09655 PF00199 Catalase LPS07_09675 PF13091 PLD-like domain LPS07_09685 PF00512 His Kinase A (phospho-acceptor) domain LPS07_09685 PF00672 HAMP domain LPS07_09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_09690 PF00072 Response regulator receiver domain LPS07_09690 PF00486 Transcriptional regulatory protein, C terminal LPS07_09695 PF00529 HlyD membrane-fusion protein of T1SS LPS07_09695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPS07_09700 PF00873 AcrB/AcrD/AcrF family LPS07_09715 PF01244 Membrane dipeptidase (Peptidase family M19) LPS07_09720 PF13186 Iron-sulfur cluster-binding domain LPS07_09720 PF04055 Radical SAM superfamily LPS07_09725 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LPS07_09730 PF03070 TENA/THI-4/PQQC family LPS07_09735 PF12706 Beta-lactamase superfamily domain LPS07_09740 PF08042 PqqA family LPS07_09745 PF00149 Calcineurin-like phosphoesterase LPS07_09755 PF00550 Phosphopantetheine attachment site LPS07_09755 PF00857 Isochorismatase family LPS07_09760 PF00106 short chain dehydrogenase LPS07_09765 PF00005 ABC transporter LPS07_09765 PF03459 TOBE domain LPS07_09770 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_09780 PF03459 TOBE domain LPS07_09780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_09785 PF00355 Rieske [2Fe-2S] domain LPS07_09785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LPS07_09790 PF00866 Ring hydroxylating beta subunit LPS07_09795 PF00970 Oxidoreductase FAD-binding domain LPS07_09795 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_09795 PF00175 Oxidoreductase NAD-binding domain LPS07_09800 PF14525 AraC-binding-like domain LPS07_09800 PF12833 Helix-turn-helix domain LPS07_09810 PF01613 Flavin reductase like domain LPS07_09825 PF01738 Dienelactone hydrolase family LPS07_09835 PF07690 Major Facilitator Superfamily LPS07_09840 PF12833 Helix-turn-helix domain LPS07_09840 PF06719 AraC-type transcriptional regulator N-terminus LPS07_09870 PF03466 LysR substrate binding domain LPS07_09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_09875 PF01144 Coenzyme A transferase LPS07_09880 PF01144 Coenzyme A transferase LPS07_09885 PF02667 Short chain fatty acid transporter LPS07_09890 PF00108 Thiolase, N-terminal domain LPS07_09890 PF02803 Thiolase, C-terminal domain LPS07_09895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_09895 PF03466 LysR substrate binding domain LPS07_09900 PF03466 LysR substrate binding domain LPS07_09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_09915 PF00206 Lyase LPS07_09915 PF10415 Fumarase C C-terminus LPS07_09920 PF07715 TonB-dependent Receptor Plug Domain LPS07_09920 PF00593 TonB dependent receptor LPS07_09925 PF00083 Sugar (and other) transporter LPS07_09935 PF02525 Flavodoxin-like fold LPS07_09940 PF01638 HxlR-like helix-turn-helix LPS07_09945 PF06445 GyrI-like small molecule binding domain LPS07_09945 PF12833 Helix-turn-helix domain LPS07_09960 PF01925 Sulfite exporter TauE/SafE LPS07_09975 PF00753 Metallo-beta-lactamase superfamily LPS07_09980 PF02954 Bacterial regulatory protein, Fis family LPS07_09980 PF00072 Response regulator receiver domain LPS07_09980 PF00158 Sigma-54 interaction domain LPS07_09985 PF01062 Bestrophin, RFP-TM, chloride channel LPS07_09990 PF00107 Zinc-binding dehydrogenase LPS07_09990 PF08240 Alcohol dehydrogenase GroES-like domain LPS07_09995 PF00106 short chain dehydrogenase LPS07_10000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPS07_10000 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_10005 PF00364 Biotin-requiring enzyme LPS07_10005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPS07_10005 PF02817 e3 binding domain LPS07_10010 PF02779 Transketolase, pyrimidine binding domain LPS07_10010 PF02780 Transketolase, C-terminal domain LPS07_10015 PF00676 Dehydrogenase E1 component LPS07_10020 PF04055 Radical SAM superfamily LPS07_10035 PF00990 Diguanylate cyclase, GGDEF domain LPS07_10035 PF08448 PAS fold LPS07_10045 PF01264 Chorismate synthase LPS07_10050 PF05175 Methyltransferase small domain LPS07_10055 PF00291 Pyridoxal-phosphate dependent enzyme LPS07_10065 PF01434 Peptidase family M41 LPS07_10065 PF17862 AAA+ lid domain LPS07_10065 PF00004 ATPase family associated with various cellular activities (AAA) LPS07_10075 PF05166 YcgL domain LPS07_10095 PF03466 LysR substrate binding domain LPS07_10095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_10100 PF02525 Flavodoxin-like fold LPS07_10105 PF00570 HRDC domain LPS07_10105 PF01612 3'-5' exonuclease LPS07_10110 PF02132 RecR protein LPS07_10110 PF13662 Toprim domain LPS07_10115 PF02575 YbaB/EbfC DNA-binding family LPS07_10125 PF01053 Cys/Met metabolism PLP-dependent enzyme LPS07_10130 PF00561 alpha/beta hydrolase fold LPS07_10145 PF01230 HIT domain LPS07_10170 PF02684 Lipid-A-disaccharide synthetase LPS07_10175 PF00593 TonB dependent receptor LPS07_10175 PF07715 TonB-dependent Receptor Plug Domain LPS07_10200 PF01925 Sulfite exporter TauE/SafE LPS07_10205 PF00793 DAHP synthetase I family LPS07_10210 PF02654 Cobalamin-5-phosphate synthase LPS07_10225 PF02277 Phosphoribosyltransferase LPS07_10230 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LPS07_10245 PF00593 TonB dependent receptor LPS07_10245 PF07715 TonB-dependent Receptor Plug Domain LPS07_10250 PF04073 Aminoacyl-tRNA editing domain LPS07_10260 PF03109 ABC1 family LPS07_10265 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_10265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_10265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_10270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_10270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_10270 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_10275 PF00487 Fatty acid desaturase LPS07_10280 PF12852 Cupin LPS07_10280 PF12833 Helix-turn-helix domain LPS07_10285 PF00639 PPIC-type PPIASE domain LPS07_10285 PF09312 SurA N-terminal domain LPS07_10290 PF00216 Bacterial DNA-binding protein LPS07_10305 PF02082 Transcriptional regulator LPS07_10310 PF00266 Aminotransferase class-V LPS07_10315 PF01592 NifU-like N terminal domain LPS07_10320 PF01521 Iron-sulphur cluster biosynthesis LPS07_10325 PF07743 HSCB C-terminal oligomerisation domain LPS07_10325 PF00226 DnaJ domain LPS07_10330 PF00012 Hsp70 protein LPS07_10335 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_10340 PF00211 Adenylate and Guanylate cyclase catalytic domain LPS07_10350 PF00271 Helicase conserved C-terminal domain LPS07_10350 PF02559 CarD-like/TRCF domain LPS07_10350 PF17757 UvrB interaction domain LPS07_10350 PF00270 DEAD/DEAH box helicase LPS07_10350 PF03461 TRCF domain LPS07_10370 PF03737 Aldolase/RraA LPS07_10375 PF13460 NAD(P)H-binding LPS07_10380 PF01649 Ribosomal protein S20 LPS07_10390 PF00459 Inositol monophosphatase family LPS07_10405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LPS07_10405 PF00005 ABC transporter LPS07_10410 PF12911 N-terminal TM domain of oligopeptide transport permease C LPS07_10410 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_10415 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_10420 PF01432 Peptidase family M3 LPS07_10425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LPS07_10440 PF07715 TonB-dependent Receptor Plug Domain LPS07_10440 PF00593 TonB dependent receptor LPS07_10450 PF01618 MotA/TolQ/ExbB proton channel family LPS07_10455 PF02472 Biopolymer transport protein ExbD/TolR LPS07_10460 PF02472 Biopolymer transport protein ExbD/TolR LPS07_10470 PF01274 Malate synthase LPS07_10475 PF03969 AFG1-like ATPase LPS07_10490 PF03956 Lysine exporter LysO LPS07_10495 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPS07_10505 PF00216 Bacterial DNA-binding protein LPS07_10510 PF00575 S1 RNA binding domain LPS07_10515 PF02224 Cytidylate kinase LPS07_10525 PF14437 MafB19-like deaminase LPS07_10535 PF03167 Uracil DNA glycosylase superfamily LPS07_10550 PF07963 Prokaryotic N-terminal methylation motif LPS07_10550 PF11612 Type II secretion system (T2SS), protein J LPS07_10555 PF07963 Prokaryotic N-terminal methylation motif LPS07_10555 PF02501 Type II secretion system (T2SS), protein I LPS07_10570 PF01026 TatD related DNase LPS07_10580 PF09115 DNA polymerase III, delta subunit, C terminal LPS07_10585 PF02348 Cytidylyltransferase LPS07_10590 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPS07_10595 PF00005 ABC transporter LPS07_10595 PF00664 ABC transporter transmembrane region LPS07_10605 PF01618 MotA/TolQ/ExbB proton channel family LPS07_10610 PF17762 HTH domain found in ParB protein LPS07_10610 PF02195 ParB-like nuclease domain LPS07_10615 PF13614 AAA domain LPS07_10620 PF02527 rRNA small subunit methyltransferase G LPS07_10625 PF00483 Nucleotidyl transferase LPS07_10630 PF01636 Phosphotransferase enzyme family LPS07_10635 PF04453 LPS transport system D LPS07_10635 PF03968 OstA-like protein LPS07_10640 PF00639 PPIC-type PPIASE domain LPS07_10640 PF09312 SurA N-terminal domain LPS07_10645 PF01116 Fructose-bisphosphate aldolase class-II LPS07_10655 PF00162 Phosphoglycerate kinase LPS07_10665 PF02545 Maf-like protein LPS07_10670 PF08007 Cupin superfamily protein LPS07_10685 PF00375 Sodium:dicarboxylate symporter family LPS07_10690 PF06912 Protein of unknown function (DUF1275) LPS07_10695 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LPS07_10700 PF00005 ABC transporter LPS07_10700 PF00664 ABC transporter transmembrane region LPS07_10710 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LPS07_10710 PF12833 Helix-turn-helix domain LPS07_10715 PF01597 Glycine cleavage H-protein LPS07_10720 PF02146 Sir2 family LPS07_10725 PF00474 Sodium:solute symporter family LPS07_10730 PF01037 Lrp/AsnC ligand binding domain LPS07_10735 PF14850 DNA-binding domain of Proline dehydrogenase LPS07_10735 PF01619 Proline dehydrogenase LPS07_10735 PF00171 Aldehyde dehydrogenase family LPS07_10735 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LPS07_10745 PF05958 tRNA (Uracil-5-)-methyltransferase LPS07_10755 PF09992 Phosphodiester glycosidase LPS07_10765 PF04264 YceI-like domain LPS07_10775 PF00456 Transketolase, thiamine diphosphate binding domain LPS07_10775 PF02780 Transketolase, C-terminal domain LPS07_10775 PF02779 Transketolase, pyrimidine binding domain LPS07_10780 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPS07_10780 PF02772 S-adenosylmethionine synthetase, central domain LPS07_10780 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPS07_10800 PF00905 Penicillin binding protein transpeptidase domain LPS07_10815 PF02075 Crossover junction endodeoxyribonuclease RuvC LPS07_10820 PF01256 Carbohydrate kinase LPS07_10820 PF03853 YjeF-related protein N-terminus LPS07_10825 PF08331 Domain of unknown function (DUF1730) LPS07_10830 PF06968 Biotin and Thiamin Synthesis associated domain LPS07_10830 PF04055 Radical SAM superfamily LPS07_10845 PF16970 Type-1 fimbrial protein, A LPS07_10850 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPS07_10850 PF02753 Pili assembly chaperone PapD, C-terminal domain LPS07_10855 PF00577 Outer membrane usher protein LPS07_10855 PF13953 PapC C-terminal domain LPS07_10855 PF13954 PapC N-terminal domain LPS07_10860 PF00419 Fimbrial protein LPS07_10870 PF12833 Helix-turn-helix domain LPS07_10870 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LPS07_10880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_10880 PF03466 LysR substrate binding domain LPS07_10885 PF00892 EamA-like transporter family LPS07_10895 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LPS07_10905 PF03466 LysR substrate binding domain LPS07_10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_10930 PF01709 Transcriptional regulator LPS07_10935 PF01037 Lrp/AsnC ligand binding domain LPS07_10945 PF00005 ABC transporter LPS07_10950 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_10955 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_10970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LPS07_10970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_10980 PF00296 Luciferase-like monooxygenase LPS07_10985 PF03180 NLPA lipoprotein LPS07_10990 PF03180 NLPA lipoprotein LPS07_10995 PF00005 ABC transporter LPS07_10995 PF09383 NIL domain LPS07_11000 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_11005 PF01926 50S ribosome-binding GTPase LPS07_11005 PF06071 Protein of unknown function (DUF933) LPS07_11030 PF03591 AzlC protein LPS07_11035 PF05437 Branched-chain amino acid transport protein (AzlD) LPS07_11045 PF02222 ATP-grasp domain LPS07_11050 PF08335 GlnD PII-uridylyltransferase LPS07_11050 PF01966 HD domain LPS07_11050 PF01909 Nucleotidyltransferase domain LPS07_11055 PF00155 Aminotransferase class I and II LPS07_11065 PF02311 AraC-like ligand binding domain LPS07_11065 PF12833 Helix-turn-helix domain LPS07_11070 PF00255 Glutathione peroxidase LPS07_11075 PF01641 SelR domain LPS07_11080 PF00155 Aminotransferase class I and II LPS07_11085 PF00375 Sodium:dicarboxylate symporter family LPS07_11090 PF00710 Asparaginase, N-terminal LPS07_11090 PF17763 Glutaminase/Asparaginase C-terminal domain LPS07_11095 PF14579 Helix-hairpin-helix motif LPS07_11095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPS07_11095 PF02811 PHP domain LPS07_11095 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPS07_11095 PF01336 OB-fold nucleic acid binding domain LPS07_11100 PF00588 SpoU rRNA Methylase family LPS07_11105 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_11120 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_11120 PF13192 Thioredoxin domain LPS07_11135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_11135 PF03466 LysR substrate binding domain LPS07_11140 PF03358 NADPH-dependent FMN reductase LPS07_11145 PF01758 Sodium Bile acid symporter family LPS07_11155 PF01022 Bacterial regulatory protein, arsR family LPS07_11160 PF03960 ArsC family LPS07_11170 PF13382 Adenine deaminase C-terminal domain LPS07_11170 PF01979 Amidohydrolase family LPS07_11180 PF03466 LysR substrate binding domain LPS07_11180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_11190 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LPS07_11195 PF01177 Asp/Glu/Hydantoin racemase LPS07_11200 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LPS07_11205 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_11210 PF00005 ABC transporter LPS07_11215 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LPS07_11225 PF00083 Sugar (and other) transporter LPS07_11230 PF00296 Luciferase-like monooxygenase LPS07_11235 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LPS07_11235 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_11235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_11245 PF01654 Cytochrome bd terminal oxidase subunit I LPS07_11250 PF02322 Cytochrome bd terminal oxidase subunit II LPS07_11260 PF00155 Aminotransferase class I and II LPS07_11260 PF00392 Bacterial regulatory proteins, gntR family LPS07_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_11265 PF03466 LysR substrate binding domain LPS07_11280 PF00698 Acyl transferase domain LPS07_11285 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LPS07_11295 PF01039 Carboxyl transferase domain LPS07_11300 PF06857 Malonate decarboxylase delta subunit (MdcD) LPS07_11305 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LPS07_11310 PF16957 Malonate decarboxylase, alpha subunit, transporter LPS07_11325 PF00392 Bacterial regulatory proteins, gntR family LPS07_11325 PF00155 Aminotransferase class I and II LPS07_11330 PF04172 LrgB-like family LPS07_11335 PF03788 LrgA family LPS07_11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_11340 PF03466 LysR substrate binding domain LPS07_11345 PF02798 Glutathione S-transferase, N-terminal domain LPS07_11345 PF14834 Glutathione S-transferase, C-terminal domain LPS07_11350 PF02798 Glutathione S-transferase, N-terminal domain LPS07_11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_11370 PF03466 LysR substrate binding domain LPS07_11380 PF00581 Rhodanese-like domain LPS07_11385 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_11395 PF00266 Aminotransferase class-V LPS07_11405 PF01810 LysE type translocator LPS07_11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_11410 PF03466 LysR substrate binding domain LPS07_11415 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPS07_11420 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPS07_11425 PF00005 ABC transporter LPS07_11430 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_11435 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_11450 PF00072 Response regulator receiver domain LPS07_11455 PF00072 Response regulator receiver domain LPS07_11455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_11455 PF09308 LuxQ, periplasmic LPS07_11455 PF00512 His Kinase A (phospho-acceptor) domain LPS07_11465 PF01037 Lrp/AsnC ligand binding domain LPS07_11465 PF13404 AsnC-type helix-turn-helix domain LPS07_11475 PF00717 Peptidase S24-like LPS07_11505 PF18011 C-terminal domain found in long catalases LPS07_11505 PF00199 Catalase LPS07_11505 PF06628 Catalase-related immune-responsive LPS07_11550 PF03466 LysR substrate binding domain LPS07_11550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_11560 PF07690 Major Facilitator Superfamily LPS07_11575 PF13193 AMP-binding enzyme C-terminal domain LPS07_11575 PF00501 AMP-binding enzyme LPS07_11580 PF00440 Bacterial regulatory proteins, tetR family LPS07_11585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_11585 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_11585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_11590 PF01039 Carboxyl transferase domain LPS07_11595 PF00378 Enoyl-CoA hydratase/isomerase LPS07_11600 PF00364 Biotin-requiring enzyme LPS07_11600 PF00289 Biotin carboxylase, N-terminal domain LPS07_11600 PF18140 Propionyl-coenzyme A carboxylase BT domain LPS07_11600 PF02785 Biotin carboxylase C-terminal domain LPS07_11600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPS07_11605 PF00682 HMGL-like LPS07_11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_11610 PF03466 LysR substrate binding domain LPS07_11625 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_11625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_11625 PF12806 Acetyl-CoA dehydrogenase C-terminal like LPS07_11625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_11635 PF07690 Major Facilitator Superfamily LPS07_11645 PF01144 Coenzyme A transferase LPS07_11650 PF01144 Coenzyme A transferase LPS07_11655 PF07690 Major Facilitator Superfamily LPS07_11660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_11660 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_11660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_11665 PF00378 Enoyl-CoA hydratase/isomerase LPS07_11675 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LPS07_11675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LPS07_11675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LPS07_11680 PF00108 Thiolase, N-terminal domain LPS07_11680 PF02803 Thiolase, C-terminal domain LPS07_11685 PF09339 IclR helix-turn-helix domain LPS07_11690 PF07690 Major Facilitator Superfamily LPS07_11695 PF03060 Nitronate monooxygenase LPS07_11700 PF00378 Enoyl-CoA hydratase/isomerase LPS07_11705 PF09339 IclR helix-turn-helix domain LPS07_11710 PF02515 CoA-transferase family III LPS07_11715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_11715 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_11715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_11720 PF07690 Major Facilitator Superfamily LPS07_11725 PF13419 Haloacid dehalogenase-like hydrolase LPS07_11730 PF00266 Aminotransferase class-V LPS07_11735 PF01266 FAD dependent oxidoreductase LPS07_11740 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_11745 PF08402 TOBE domain LPS07_11745 PF00005 ABC transporter LPS07_11755 PF07702 UTRA domain LPS07_11755 PF00392 Bacterial regulatory proteins, gntR family LPS07_11760 PF01168 Alanine racemase, N-terminal domain LPS07_11760 PF00842 Alanine racemase, C-terminal domain LPS07_11765 PF01494 FAD binding domain LPS07_11770 PF09339 IclR helix-turn-helix domain LPS07_11770 PF01614 Bacterial transcriptional regulator LPS07_11775 PF02525 Flavodoxin-like fold LPS07_11780 PF03466 LysR substrate binding domain LPS07_11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_11795 PF13333 Integrase core domain LPS07_11795 PF00665 Integrase core domain LPS07_11795 PF13276 HTH-like domain LPS07_11825 PF03061 Thioesterase superfamily LPS07_11830 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_11835 PF07848 PaaX-like protein LPS07_11835 PF08223 PaaX-like protein C-terminal domain LPS07_11840 PF00501 AMP-binding enzyme LPS07_11840 PF14535 AMP-binding enzyme C-terminal domain LPS07_11845 PF02803 Thiolase, C-terminal domain LPS07_11845 PF00108 Thiolase, N-terminal domain LPS07_11850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LPS07_11850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LPS07_11850 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LPS07_11855 PF00378 Enoyl-CoA hydratase/isomerase LPS07_11860 PF00378 Enoyl-CoA hydratase/isomerase LPS07_11865 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_11865 PF00175 Oxidoreductase NAD-binding domain LPS07_11865 PF00970 Oxidoreductase FAD-binding domain LPS07_11870 PF01883 Iron-sulfur cluster assembly protein LPS07_11875 PF05138 Phenylacetic acid catabolic protein LPS07_11880 PF06243 Phenylacetic acid degradation B LPS07_11885 PF05138 Phenylacetic acid catabolic protein LPS07_11890 PF01575 MaoC like domain LPS07_11890 PF00171 Aldehyde dehydrogenase family LPS07_11895 PF03315 Serine dehydratase beta chain LPS07_11895 PF03313 Serine dehydratase alpha chain LPS07_11910 PF09278 MerR, DNA binding LPS07_11910 PF00376 MerR family regulatory protein LPS07_11930 PF00107 Zinc-binding dehydrogenase LPS07_11930 PF13823 Alcohol dehydrogenase GroES-associated LPS07_11930 PF08240 Alcohol dehydrogenase GroES-like domain LPS07_11935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LPS07_11935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LPS07_11940 PF00892 EamA-like transporter family LPS07_11960 PF00665 Integrase core domain LPS07_11960 PF13276 HTH-like domain LPS07_11960 PF13333 Integrase core domain LPS07_11975 PF04829 Pre-toxin domain with VENN motif LPS07_11975 PF13018 Extended Signal Peptide of Type V secretion system LPS07_11975 PF13332 Hemagglutinin repeat LPS07_11975 PF05860 haemagglutination activity domain LPS07_11980 PF08479 POTRA domain, ShlB-type LPS07_11980 PF17287 POTRA domain LPS07_11980 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPS07_11985 PF00654 Voltage gated chloride channel LPS07_11990 PF00289 Biotin carboxylase, N-terminal domain LPS07_11990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPS07_11990 PF00364 Biotin-requiring enzyme LPS07_11990 PF02785 Biotin carboxylase C-terminal domain LPS07_12000 PF07286 Protein of unknown function (DUF1445) LPS07_12005 PF03746 LamB/YcsF family LPS07_12010 PF01566 Natural resistance-associated macrophage protein LPS07_12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_12015 PF03466 LysR substrate binding domain LPS07_12025 PF04542 Sigma-70 region 2 LPS07_12025 PF08281 Sigma-70, region 4 LPS07_12035 PF05114 Protein of unknown function (DUF692) LPS07_12085 PF05368 NmrA-like family LPS07_12090 PF01638 HxlR-like helix-turn-helix LPS07_12105 PF00293 NUDIX domain LPS07_12110 PF00563 EAL domain LPS07_12110 PF00990 Diguanylate cyclase, GGDEF domain LPS07_12110 PF03707 Bacterial signalling protein N terminal repeat LPS07_12115 PF04542 Sigma-70 region 2 LPS07_12115 PF08281 Sigma-70, region 4 LPS07_12120 PF16220 Domain of unknown function (DUF4880) LPS07_12120 PF04773 FecR protein LPS07_12125 PF00593 TonB dependent receptor LPS07_12125 PF07715 TonB-dependent Receptor Plug Domain LPS07_12150 PF07690 Major Facilitator Superfamily LPS07_12160 PF01292 Prokaryotic cytochrome b561 LPS07_12165 PF00199 Catalase LPS07_12180 PF02649 Type I GTP cyclohydrolase folE2 LPS07_12185 PF00101 Ribulose bisphosphate carboxylase, small chain LPS07_12185 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_12190 PF01979 Amidohydrolase family LPS07_12200 PF00892 EamA-like transporter family LPS07_12205 PF01037 Lrp/AsnC ligand binding domain LPS07_12210 PF13520 Amino acid permease LPS07_12215 PF01636 Phosphotransferase enzyme family LPS07_12225 PF12833 Helix-turn-helix domain LPS07_12225 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LPS07_12230 PF00202 Aminotransferase class-III LPS07_12235 PF05188 MutS domain II LPS07_12235 PF05192 MutS domain III LPS07_12235 PF05190 MutS family domain IV LPS07_12235 PF00488 MutS domain V LPS07_12235 PF01624 MutS domain I LPS07_12245 PF11953 Domain of unknown function (DUF3470) LPS07_12245 PF00037 4Fe-4S binding domain LPS07_12255 PF01596 O-methyltransferase LPS07_12265 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_12270 PF01205 Uncharacterized protein family UPF0029 LPS07_12275 PF13533 Biotin-lipoyl like LPS07_12280 PF03412 Peptidase C39 family LPS07_12280 PF00005 ABC transporter LPS07_12280 PF00664 ABC transporter transmembrane region LPS07_12285 PF02321 Outer membrane efflux protein LPS07_12295 PF00005 ABC transporter LPS07_12295 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPS07_12300 PF03968 OstA-like protein LPS07_12315 PF00571 CBS domain LPS07_12315 PF01380 SIS domain LPS07_12320 PF09190 DALR domain LPS07_12320 PF01406 tRNA synthetases class I (C) catalytic domain LPS07_12350 PF01638 HxlR-like helix-turn-helix LPS07_12365 PF00924 Mechanosensitive ion channel LPS07_12410 PF00440 Bacterial regulatory proteins, tetR family LPS07_12420 PF00665 Integrase core domain LPS07_12420 PF13276 HTH-like domain LPS07_12420 PF13333 Integrase core domain LPS07_12430 PF00625 Guanylate kinase LPS07_12440 PF08241 Methyltransferase domain LPS07_12445 PF13419 Haloacid dehalogenase-like hydrolase LPS07_12450 PF01037 Lrp/AsnC ligand binding domain LPS07_12460 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPS07_12460 PF03807 NADP oxidoreductase coenzyme F420-dependent LPS07_12470 PF00313 'Cold-shock' DNA-binding domain LPS07_12475 PF03279 Bacterial lipid A biosynthesis acyltransferase LPS07_12480 PF01810 LysE type translocator LPS07_12515 PF02601 Exonuclease VII, large subunit LPS07_12515 PF13742 OB-fold nucleic acid binding domain LPS07_12550 PF09278 MerR, DNA binding LPS07_12550 PF00376 MerR family regulatory protein LPS07_12555 PF00403 Heavy-metal-associated domain LPS07_12560 PF00403 Heavy-metal-associated domain LPS07_12565 PF03466 LysR substrate binding domain LPS07_12565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_12575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LPS07_12575 PF00355 Rieske [2Fe-2S] domain LPS07_12585 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_12585 PF00175 Oxidoreductase NAD-binding domain LPS07_12585 PF00970 Oxidoreductase FAD-binding domain LPS07_12590 PF00106 short chain dehydrogenase LPS07_12595 PF03594 Benzoate membrane transport protein LPS07_12600 PF07690 Major Facilitator Superfamily LPS07_12610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPS07_12610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPS07_12615 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPS07_12615 PF00271 Helicase conserved C-terminal domain LPS07_12615 PF04408 Helicase associated domain (HA2) LPS07_12615 PF11898 Domain of unknown function (DUF3418) LPS07_12615 PF00270 DEAD/DEAH box helicase LPS07_12620 PF00578 AhpC/TSA family LPS07_12620 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPS07_12640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_12640 PF13192 Thioredoxin domain LPS07_12650 PF00043 Glutathione S-transferase, C-terminal domain LPS07_12650 PF02798 Glutathione S-transferase, N-terminal domain LPS07_12660 PF02390 Putative methyltransferase LPS07_12665 PF13417 Glutathione S-transferase, N-terminal domain LPS07_12665 PF00043 Glutathione S-transferase, C-terminal domain LPS07_12675 PF00691 OmpA family LPS07_12675 PF13488 Glycine zipper LPS07_12680 PF01979 Amidohydrolase family LPS07_12685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPS07_12685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPS07_12695 PF01170 Putative RNA methylase family UPF0020 LPS07_12695 PF02926 THUMP domain LPS07_12695 PF10672 S-adenosylmethionine-dependent methyltransferase LPS07_12710 PF07724 AAA domain (Cdc48 subfamily) LPS07_12710 PF00004 ATPase family associated with various cellular activities (AAA) LPS07_12710 PF10431 C-terminal, D2-small domain, of ClpB protein LPS07_12710 PF17871 AAA lid domain LPS07_12710 PF02861 Clp amino terminal domain, pathogenicity island component LPS07_12725 PF02566 OsmC-like protein LPS07_12735 PF00027 Cyclic nucleotide-binding domain LPS07_12735 PF13545 Crp-like helix-turn-helix domain LPS07_12740 PF00248 Aldo/keto reductase family LPS07_12755 PF00709 Adenylosuccinate synthetase LPS07_12760 PF13393 Histidyl-tRNA synthetase LPS07_12765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPS07_12765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPS07_12770 PF02272 DHHA1 domain LPS07_12770 PF01411 tRNA synthetases class II (A) LPS07_12770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPS07_12775 PF13840 ACT domain LPS07_12775 PF00696 Amino acid kinase family LPS07_12775 PF01842 ACT domain LPS07_12780 PF02599 Global regulator protein family LPS07_12785 PF01351 Ribonuclease HII LPS07_12795 PF01292 Prokaryotic cytochrome b561 LPS07_12800 PF00962 Adenosine/AMP deaminase LPS07_12805 PF00860 Permease family LPS07_12815 PF02678 Pirin LPS07_12815 PF17954 Quercetinase C-terminal cupin domain LPS07_12820 PF00440 Bacterial regulatory proteins, tetR family LPS07_12820 PF17932 Tetracyclin repressor-like, C-terminal domain LPS07_12830 PF00106 short chain dehydrogenase LPS07_12835 PF00743 Flavin-binding monooxygenase-like LPS07_12840 PF04072 Leucine carboxyl methyltransferase LPS07_12845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_12845 PF03466 LysR substrate binding domain LPS07_12850 PF07690 Major Facilitator Superfamily LPS07_12855 PF05681 Fumarate hydratase (Fumerase) LPS07_12860 PF05683 Fumarase C-terminus LPS07_12865 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LPS07_12865 PF12833 Helix-turn-helix domain LPS07_12870 PF00743 Flavin-binding monooxygenase-like LPS07_12875 PF00106 short chain dehydrogenase LPS07_12880 PF07859 alpha/beta hydrolase fold LPS07_12885 PF05199 GMC oxidoreductase LPS07_12890 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LPS07_12890 PF18381 YcaO cyclodehydratase C-terminal domain LPS07_12895 PF03573 outer membrane porin, OprD family LPS07_12900 PF07690 Major Facilitator Superfamily LPS07_12905 PF00884 Sulfatase LPS07_12910 PF03781 Sulfatase-modifying factor enzyme 1 LPS07_12920 PF00355 Rieske [2Fe-2S] domain LPS07_12925 PF00175 Oxidoreductase NAD-binding domain LPS07_12925 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_12945 PF00378 Enoyl-CoA hydratase/isomerase LPS07_12950 PF00171 Aldehyde dehydrogenase family LPS07_12960 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_12960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_12960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_12965 PF03573 outer membrane porin, OprD family LPS07_12980 PF07519 Tannase and feruloyl esterase LPS07_12985 PF07729 FCD domain LPS07_12985 PF00392 Bacterial regulatory proteins, gntR family LPS07_12990 PF00171 Aldehyde dehydrogenase family LPS07_12995 PF00701 Dihydrodipicolinate synthetase family LPS07_13000 PF13378 Enolase C-terminal domain-like LPS07_13005 PF07690 Major Facilitator Superfamily LPS07_13010 PF08666 SAF domain LPS07_13010 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LPS07_13015 PF00892 EamA-like transporter family LPS07_13025 PF00171 Aldehyde dehydrogenase family LPS07_13035 PF04829 Pre-toxin domain with VENN motif LPS07_13035 PF05860 haemagglutination activity domain LPS07_13035 PF13332 Hemagglutinin repeat LPS07_13035 PF13018 Extended Signal Peptide of Type V secretion system LPS07_13045 PF00324 Amino acid permease LPS07_13050 PF04958 Arginine N-succinyltransferase beta subunit LPS07_13055 PF00202 Aminotransferase class-III LPS07_13065 PF00171 Aldehyde dehydrogenase family LPS07_13075 PF00392 Bacterial regulatory proteins, gntR family LPS07_13075 PF07729 FCD domain LPS07_13085 PF00324 Amino acid permease LPS07_13090 PF01266 FAD dependent oxidoreductase LPS07_13095 PF00324 Amino acid permease LPS07_13105 PF05643 Putative bacterial lipoprotein (DUF799) LPS07_13115 PF03783 Curli production assembly/transport component CsgG LPS07_13140 PF05987 Bacterial protein of unknown function (DUF898) LPS07_13155 PF13356 Arm DNA-binding domain LPS07_13155 PF00589 Phage integrase family LPS07_13230 PF02384 N-6 DNA Methylase LPS07_13240 PF02661 Fic/DOC family LPS07_13285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPS07_13285 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_13290 PF00764 Arginosuccinate synthase LPS07_13295 PF00360 Phytochrome region LPS07_13295 PF00990 Diguanylate cyclase, GGDEF domain LPS07_13295 PF01590 GAF domain LPS07_13295 PF00563 EAL domain LPS07_13300 PF01979 Amidohydrolase family LPS07_13305 PF00929 Exonuclease LPS07_13330 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_13330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPS07_13335 PF00005 ABC transporter LPS07_13335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LPS07_13340 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_13340 PF12911 N-terminal TM domain of oligopeptide transport permease C LPS07_13345 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_13350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LPS07_13355 PF01464 Transglycosylase SLT domain LPS07_13355 PF01476 LysM domain LPS07_13355 PF01476 LysM domain LPS07_13355 PF01464 Transglycosylase SLT domain LPS07_13360 PF00929 Exonuclease LPS07_13370 PF09297 NADH pyrophosphatase zinc ribbon domain LPS07_13370 PF00293 NUDIX domain LPS07_13380 PF04972 BON domain LPS07_13385 PF02021 Uncharacterised protein family UPF0102 LPS07_13390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPS07_13400 PF03466 LysR substrate binding domain LPS07_13400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_13405 PF01810 LysE type translocator LPS07_13415 PF13411 MerR HTH family regulatory protein LPS07_13425 PF01494 FAD binding domain LPS07_13430 PF01494 FAD binding domain LPS07_13435 PF00557 Metallopeptidase family M24 LPS07_13435 PF05195 Aminopeptidase P, N-terminal domain LPS07_13590 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) LPS07_13605 PF06381 Protein of unknown function (DUF1073) LPS07_13715 PF07690 Major Facilitator Superfamily LPS07_13720 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LPS07_13720 PF01610 Transposase LPS07_13720 PF13542 Helix-turn-helix domain of transposase family ISL3 LPS07_13805 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPS07_13810 PF05362 Lon protease (S16) C-terminal proteolytic domain LPS07_13810 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPS07_13810 PF00004 ATPase family associated with various cellular activities (AAA) LPS07_13815 PF02590 Predicted SPOUT methyltransferase LPS07_13820 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LPS07_13830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LPS07_13830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LPS07_13835 PF04060 Putative Fe-S cluster LPS07_13840 PF10576 Iron-sulfur binding domain of endonuclease III LPS07_13840 PF00633 Helix-hairpin-helix motif LPS07_13840 PF00730 HhH-GPD superfamily base excision DNA repair protein LPS07_13850 PF05191 Adenylate kinase, active site lid LPS07_13865 PF03717 Penicillin-binding Protein dimerisation domain LPS07_13865 PF00905 Penicillin binding protein transpeptidase domain LPS07_13880 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPS07_13885 PF01730 UreF LPS07_13890 PF02814 UreE urease accessory protein, N-terminal domain LPS07_13890 PF05194 UreE urease accessory protein, C-terminal domain LPS07_13895 PF00449 Urease alpha-subunit, N-terminal domain LPS07_13895 PF01979 Amidohydrolase family LPS07_13900 PF00699 Urease beta subunit LPS07_13905 PF00547 Urease, gamma subunit LPS07_13910 PF01774 UreD urease accessory protein LPS07_13920 PF17185 NlpE C-terminal OB domain LPS07_13920 PF04170 NlpE N-terminal domain LPS07_13925 PF00463 Isocitrate lyase family LPS07_13930 PF03466 LysR substrate binding domain LPS07_13930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_13935 PF00571 CBS domain LPS07_13935 PF03471 Transporter associated domain LPS07_13935 PF01595 Cyclin M transmembrane N-terminal domain LPS07_13940 PF03600 Citrate transporter LPS07_13960 PF00009 Elongation factor Tu GTP binding domain LPS07_13965 PF01507 Phosphoadenosine phosphosulfate reductase family LPS07_13975 PF14052 Capsule assembly protein Wzi LPS07_13980 PF00152 tRNA synthetases class II (D, K and N) LPS07_13980 PF01336 OB-fold nucleic acid binding domain LPS07_13995 PF00301 Rubredoxin LPS07_14000 PF18113 Rubredoxin binding C-terminal domain LPS07_14000 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_14005 PF00561 alpha/beta hydrolase fold LPS07_14010 PF03466 LysR substrate binding domain LPS07_14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_14025 PF13090 Polyphosphate kinase C-terminal domain 2 LPS07_14025 PF17941 Polyphosphate kinase C-terminal domain 1 LPS07_14025 PF13089 Polyphosphate kinase N-terminal domain LPS07_14025 PF02503 Polyphosphate kinase middle domain LPS07_14030 PF00912 Transglycosylase LPS07_14035 PF01694 Rhomboid family LPS07_14045 PF00005 ABC transporter LPS07_14050 PF13472 GDSL-like Lipase/Acylhydrolase family LPS07_14055 PF00484 Carbonic anhydrase LPS07_14060 PF00561 alpha/beta hydrolase fold LPS07_14070 PF00593 TonB dependent receptor LPS07_14070 PF07715 TonB-dependent Receptor Plug Domain LPS07_14075 PF01106 NifU-like domain LPS07_14075 PF01521 Iron-sulphur cluster biosynthesis LPS07_14085 PF00884 Sulfatase LPS07_14090 PF03781 Sulfatase-modifying factor enzyme 1 LPS07_14105 PF00291 Pyridoxal-phosphate dependent enzyme LPS07_14110 PF01384 Phosphate transporter family LPS07_14115 PF02607 B12 binding domain LPS07_14115 PF02965 Vitamin B12 dependent methionine synthase, activation domain LPS07_14115 PF00809 Pterin binding enzyme LPS07_14115 PF02574 Homocysteine S-methyltransferase LPS07_14115 PF02310 B12 binding domain LPS07_14125 PF02780 Transketolase, C-terminal domain LPS07_14125 PF02779 Transketolase, pyrimidine binding domain LPS07_14130 PF00456 Transketolase, thiamine diphosphate binding domain LPS07_14135 PF07690 Major Facilitator Superfamily LPS07_14145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_14145 PF03466 LysR substrate binding domain LPS07_14155 PF01263 Aldose 1-epimerase LPS07_14160 PF07690 Major Facilitator Superfamily LPS07_14165 PF02311 AraC-like ligand binding domain LPS07_14165 PF12833 Helix-turn-helix domain LPS07_14170 PF04960 Glutaminase LPS07_14175 PF01327 Polypeptide deformylase LPS07_14180 PF08946 Osmosensory transporter coiled coil LPS07_14180 PF00083 Sugar (and other) transporter LPS07_14190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPS07_14190 PF00205 Thiamine pyrophosphate enzyme, central domain LPS07_14190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPS07_14195 PF00171 Aldehyde dehydrogenase family LPS07_14200 PF01958 Domain of unknown function DUF108 LPS07_14200 PF03447 Homoserine dehydrogenase, NAD binding domain LPS07_14210 PF12697 Alpha/beta hydrolase family LPS07_14220 PF07690 Major Facilitator Superfamily LPS07_14225 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_14225 PF14759 Reductase C-terminal LPS07_14230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPS07_14240 PF00355 Rieske [2Fe-2S] domain LPS07_14250 PF00355 Rieske [2Fe-2S] domain LPS07_14255 PF01614 Bacterial transcriptional regulator LPS07_14255 PF09339 IclR helix-turn-helix domain LPS07_14270 PF00378 Enoyl-CoA hydratase/isomerase LPS07_14280 PF00535 Glycosyl transferase family 2 LPS07_14285 PF14883 Hypothetical glycosyl hydrolase family 13 LPS07_14285 PF01522 Polysaccharide deacetylase LPS07_14290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPS07_14295 PF07152 YaeQ protein LPS07_14300 PF00375 Sodium:dicarboxylate symporter family LPS07_14305 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPS07_14305 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPS07_14315 PF03061 Thioesterase superfamily LPS07_14325 PF02028 BCCT, betaine/carnitine/choline family transporter LPS07_14330 PF02028 BCCT, betaine/carnitine/choline family transporter LPS07_14335 PF13977 BetI-type transcriptional repressor, C-terminal LPS07_14335 PF00440 Bacterial regulatory proteins, tetR family LPS07_14340 PF00171 Aldehyde dehydrogenase family LPS07_14345 PF05199 GMC oxidoreductase LPS07_14345 PF00732 GMC oxidoreductase LPS07_14350 PF06039 Malate:quinone oxidoreductase (Mqo) LPS07_14360 PF02574 Homocysteine S-methyltransferase LPS07_14365 PF13520 Amino acid permease LPS07_14400 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LPS07_14400 PF04717 Type VI secretion system, phage-baseplate injector LPS07_14400 PF13296 Putative type VI secretion system Rhs element Vgr LPS07_14415 PF00701 Dihydrodipicolinate synthetase family LPS07_14420 PF00083 Sugar (and other) transporter LPS07_14430 PF04851 Type III restriction enzyme, res subunit LPS07_14430 PF00271 Helicase conserved C-terminal domain LPS07_14430 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPS07_14430 PF08463 EcoEI R protein C-terminal LPS07_14440 PF12161 HsdM N-terminal domain LPS07_14440 PF02384 N-6 DNA Methylase LPS07_14475 PF07728 AAA domain (dynein-related subfamily) LPS07_14475 PF12102 Domain of unknown function (DUF3578) LPS07_14490 PF07690 Major Facilitator Superfamily LPS07_14495 PF13533 Biotin-lipoyl like LPS07_14500 PF03061 Thioesterase superfamily LPS07_14505 PF00490 Delta-aminolevulinic acid dehydratase LPS07_14510 PF01266 FAD dependent oxidoreductase LPS07_14515 PF01370 NAD dependent epimerase/dehydratase family LPS07_14515 PF08338 Domain of unknown function (DUF1731) LPS07_14535 PF00149 Calcineurin-like phosphoesterase LPS07_14535 PF12320 Type 5 capsule protein repressor C-terminal domain LPS07_14545 PF01168 Alanine racemase, N-terminal domain LPS07_14550 PF00437 Type II/IV secretion system protein LPS07_14555 PF00437 Type II/IV secretion system protein LPS07_14560 PF01475 Ferric uptake regulator family LPS07_14565 PF04355 SmpA / OmlA family LPS07_14570 PF03658 RnfH family Ubiquitin LPS07_14580 PF01814 Hemerythrin HHE cation binding domain LPS07_14585 PF13230 Glutamine amidotransferases class-II LPS07_14595 PF00696 Amino acid kinase family LPS07_14600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPS07_14600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPS07_14600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPS07_14600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPS07_14605 PF00692 dUTPase LPS07_14610 PF00580 UvrD/REP helicase N-terminal domain LPS07_14610 PF13361 UvrD-like helicase C-terminal domain LPS07_14615 PF00691 OmpA family LPS07_14615 PF13488 Glycine zipper LPS07_14620 PF01553 Acyltransferase LPS07_14630 PF03775 Septum formation inhibitor MinC, C-terminal domain LPS07_14635 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPS07_14640 PF03776 Septum formation topological specificity factor MinE LPS07_14655 PF01810 LysE type translocator LPS07_14660 PF17854 FtsK alpha domain LPS07_14660 PF09397 Ftsk gamma domain LPS07_14660 PF01580 FtsK/SpoIIIE family LPS07_14660 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPS07_14665 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_14670 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPS07_14675 PF04377 Arginine-tRNA-protein transferase, C terminus LPS07_14675 PF04376 Arginine-tRNA-protein transferase, N terminus LPS07_14680 PF00583 Acetyltransferase (GNAT) family LPS07_14695 PF03143 Elongation factor Tu C-terminal domain LPS07_14695 PF00009 Elongation factor Tu GTP binding domain LPS07_14695 PF03144 Elongation factor Tu domain 2 LPS07_14700 PF00679 Elongation factor G C-terminus LPS07_14700 PF14492 Elongation Factor G, domain II LPS07_14700 PF03764 Elongation factor G, domain IV LPS07_14700 PF00009 Elongation factor Tu GTP binding domain LPS07_14700 PF03144 Elongation factor Tu domain 2 LPS07_14705 PF00177 Ribosomal protein S7p/S5e LPS07_14710 PF00164 Ribosomal protein S12/S23 LPS07_14720 PF02801 Beta-ketoacyl synthase, C-terminal domain LPS07_14720 PF00109 Beta-ketoacyl synthase, N-terminal domain LPS07_14725 PF03653 Uncharacterised protein family (UPF0093) LPS07_14735 PF00795 Carbon-nitrogen hydrolase LPS07_14735 PF02540 NAD synthase LPS07_14750 PF00970 Oxidoreductase FAD-binding domain LPS07_14750 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_14750 PF00175 Oxidoreductase NAD-binding domain LPS07_14755 PF00171 Aldehyde dehydrogenase family LPS07_14760 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LPS07_14760 PF00355 Rieske [2Fe-2S] domain LPS07_14765 PF07859 alpha/beta hydrolase fold LPS07_14770 PF02028 BCCT, betaine/carnitine/choline family transporter LPS07_14775 PF00180 Isocitrate/isopropylmalate dehydrogenase LPS07_14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_14780 PF03466 LysR substrate binding domain LPS07_14800 PF00037 4Fe-4S binding domain LPS07_14805 PF01467 Cytidylyltransferase-like LPS07_14810 PF01668 SmpB protein LPS07_14815 PF03358 NADPH-dependent FMN reductase LPS07_14820 PF02578 Multi-copper polyphenol oxidoreductase laccase LPS07_14825 PF00849 RNA pseudouridylate synthase LPS07_14825 PF01479 S4 domain LPS07_14830 PF13525 Outer membrane lipoprotein LPS07_14835 PF08275 DNA primase catalytic core, N-terminal domain LPS07_14835 PF08278 DNA primase DnaG DnaB-binding LPS07_14835 PF01807 CHC2 zinc finger LPS07_14835 PF10410 DnaB-helicase binding domain of primase LPS07_14840 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPS07_14840 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPS07_14840 PF01488 Shikimate / quinate 5-dehydrogenase LPS07_14850 PF03550 Outer membrane lipoprotein LolB LPS07_14855 PF08544 GHMP kinases C terminal LPS07_14855 PF00288 GHMP kinases N terminal domain LPS07_14880 PF14572 Phosphoribosyl synthetase-associated domain LPS07_14880 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPS07_14885 PF01386 Ribosomal L25p family LPS07_14890 PF01195 Peptidyl-tRNA hydrolase LPS07_14895 PF02261 Aspartate decarboxylase LPS07_14910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPS07_14920 PF02581 Thiamine monophosphate synthase LPS07_14920 PF08543 Phosphomethylpyrimidine kinase LPS07_14920 PF03070 TENA/THI-4/PQQC family LPS07_14925 PF04972 BON domain LPS07_14925 PF01476 LysM domain LPS07_14930 PF00550 Phosphopantetheine attachment site LPS07_14940 PF00698 Acyl transferase domain LPS07_14945 PF01783 Ribosomal L32p protein family LPS07_14950 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPS07_14955 PF04315 Elongation factor P hydroxylase LPS07_14960 PF01300 Telomere recombination LPS07_14965 PF02616 Segregation and condensation protein ScpA LPS07_14970 PF04079 Segregation and condensation complex subunit ScpB LPS07_14975 PF00849 RNA pseudouridylate synthase LPS07_14975 PF01479 S4 domain LPS07_14990 PF00155 Aminotransferase class I and II LPS07_14995 PF00202 Aminotransferase class-III LPS07_14995 PF06968 Biotin and Thiamin Synthesis associated domain LPS07_14995 PF04055 Radical SAM superfamily LPS07_15000 PF12697 Alpha/beta hydrolase family LPS07_15000 PF08241 Methyltransferase domain LPS07_15010 PF00982 Glycosyltransferase family 20 LPS07_15015 PF07690 Major Facilitator Superfamily LPS07_15020 PF00210 Ferritin-like domain LPS07_15025 PF01653 NAD-dependent DNA ligase adenylation domain LPS07_15025 PF03120 NAD-dependent DNA ligase OB-fold domain LPS07_15025 PF00533 BRCA1 C Terminus (BRCT) domain LPS07_15025 PF12826 Helix-hairpin-helix motif LPS07_15025 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPS07_15035 PF02463 RecF/RecN/SMC N terminal domain LPS07_15035 PF06470 SMC proteins Flexible Hinge Domain LPS07_15045 PF01925 Sulfite exporter TauE/SafE LPS07_15055 PF03309 Type III pantothenate kinase LPS07_15060 PF00448 SRP54-type protein, GTPase domain LPS07_15060 PF02881 SRP54-type protein, helical bundle domain LPS07_15060 PF02978 Signal peptide binding domain LPS07_15070 PF01207 Dihydrouridine synthase (Dus) LPS07_15100 PF00692 dUTPase LPS07_15115 PF01048 Phosphorylase superfamily LPS07_15120 PF10609 NUBPL iron-transfer P-loop NTPase LPS07_15130 PF09334 tRNA synthetases class I (M) LPS07_15130 PF01588 Putative tRNA binding domain LPS07_15160 PF13533 Biotin-lipoyl like LPS07_15165 PF00291 Pyridoxal-phosphate dependent enzyme LPS07_15180 PF05552 Conserved TM helix LPS07_15195 PF00970 Oxidoreductase FAD-binding domain LPS07_15195 PF00175 Oxidoreductase NAD-binding domain LPS07_15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_15200 PF03466 LysR substrate binding domain LPS07_15215 PF00361 Proton-conducting membrane transporter LPS07_15220 PF00361 Proton-conducting membrane transporter LPS07_15225 PF00361 Proton-conducting membrane transporter LPS07_15225 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPS07_15230 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPS07_15235 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPS07_15240 PF12838 4Fe-4S dicluster domain LPS07_15245 PF00146 NADH dehydrogenase LPS07_15250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LPS07_15250 PF00384 Molybdopterin oxidoreductase LPS07_15250 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPS07_15255 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPS07_15255 PF10531 SLBB domain LPS07_15255 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPS07_15265 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPS07_15265 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPS07_15270 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPS07_15275 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPS07_15280 PF00990 Diguanylate cyclase, GGDEF domain LPS07_15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_15290 PF00512 His Kinase A (phospho-acceptor) domain LPS07_15290 PF00672 HAMP domain LPS07_15295 PF00486 Transcriptional regulatory protein, C terminal LPS07_15295 PF00072 Response regulator receiver domain LPS07_15305 PF00317 Ribonucleotide reductase, all-alpha domain LPS07_15305 PF03477 ATP cone domain LPS07_15305 PF02867 Ribonucleotide reductase, barrel domain LPS07_15315 PF00268 Ribonucleotide reductase, small chain LPS07_15320 PF02567 Phenazine biosynthesis-like protein LPS07_15345 PF17074 Darcynin, domain of unknown function LPS07_15355 PF00753 Metallo-beta-lactamase superfamily LPS07_15365 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPS07_15370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LPS07_15375 PF03091 CutA1 divalent ion tolerance protein LPS07_15380 PF00166 Chaperonin 10 Kd subunit LPS07_15385 PF00118 TCP-1/cpn60 chaperonin family LPS07_15400 PF13936 Helix-turn-helix domain LPS07_15400 PF00665 Integrase core domain LPS07_15415 PF01613 Flavin reductase like domain LPS07_15420 PF08267 Cobalamin-independent synthase, N-terminal domain LPS07_15420 PF01717 Cobalamin-independent synthase, Catalytic domain LPS07_15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_15430 PF03466 LysR substrate binding domain LPS07_15435 PF01810 LysE type translocator LPS07_15445 PF12833 Helix-turn-helix domain LPS07_15445 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LPS07_15450 PF01546 Peptidase family M20/M25/M40 LPS07_15450 PF07687 Peptidase dimerisation domain LPS07_15465 PF01970 Tripartite tricarboxylate transporter TctA family LPS07_15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_15480 PF03466 LysR substrate binding domain LPS07_15485 PF07690 Major Facilitator Superfamily LPS07_15495 PF03466 LysR substrate binding domain LPS07_15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_15500 PF14537 Cytochrome c3 LPS07_15500 PF00890 FAD binding domain LPS07_15515 PF17932 Tetracyclin repressor-like, C-terminal domain LPS07_15515 PF00440 Bacterial regulatory proteins, tetR family LPS07_15525 PF02515 CoA-transferase family III LPS07_15530 PF07690 Major Facilitator Superfamily LPS07_15535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_15535 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_15535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_15540 PF03466 LysR substrate binding domain LPS07_15540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_15545 PF00107 Zinc-binding dehydrogenase LPS07_15545 PF08240 Alcohol dehydrogenase GroES-like domain LPS07_15550 PF00962 Adenosine/AMP deaminase LPS07_15575 PF02445 Quinolinate synthetase A protein LPS07_15580 PF01960 ArgJ family LPS07_15585 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPS07_15585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPS07_15590 PF00893 Small Multidrug Resistance protein LPS07_15605 PF00394 Multicopper oxidase LPS07_15605 PF07731 Multicopper oxidase LPS07_15605 PF07732 Multicopper oxidase LPS07_15620 PF00834 Ribulose-phosphate 3 epimerase family LPS07_15630 PF00756 Putative esterase LPS07_15640 PF04445 Putative SAM-dependent methyltransferase LPS07_15645 PF00814 Glycoprotease family LPS07_15650 PF00132 Bacterial transferase hexapeptide (six repeats) LPS07_15655 PF00293 NUDIX domain LPS07_15700 PF00155 Aminotransferase class I and II LPS07_15705 PF00815 Histidinol dehydrogenase LPS07_15710 PF01634 ATP phosphoribosyltransferase LPS07_15715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPS07_15720 PF01722 BolA-like protein LPS07_15725 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPS07_15730 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPS07_15730 PF04963 Sigma-54 factor, core binding domain LPS07_15730 PF04552 Sigma-54, DNA binding domain LPS07_15775 PF00795 Carbon-nitrogen hydrolase LPS07_15785 PF01047 MarR family LPS07_15790 PF02566 OsmC-like protein LPS07_15795 PF00437 Type II/IV secretion system protein LPS07_15815 PF01367 5'-3' exonuclease, C-terminal SAM fold LPS07_15815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPS07_15815 PF00476 DNA polymerase family A LPS07_15815 PF01612 3'-5' exonuclease LPS07_15820 PF02325 YGGT family LPS07_15825 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPS07_15825 PF03807 NADP oxidoreductase coenzyme F420-dependent LPS07_15830 PF01171 PP-loop family LPS07_15830 PF09179 TilS substrate binding domain LPS07_15830 PF11734 TilS substrate C-terminal domain LPS07_15835 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPS07_15840 PF02541 Ppx/GppA phosphatase family LPS07_15845 PF00085 Thioredoxin LPS07_15850 PF07497 Rho termination factor, RNA-binding domain LPS07_15850 PF07498 Rho termination factor, N-terminal domain LPS07_15850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPS07_15865 PF00216 Bacterial DNA-binding protein LPS07_15870 PF03147 Ferredoxin-fold anticodon binding domain LPS07_15870 PF01588 Putative tRNA binding domain LPS07_15870 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPS07_15870 PF03483 B3/4 domain LPS07_15870 PF03484 tRNA synthetase B5 domain LPS07_15875 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPS07_15875 PF01409 tRNA synthetases class II core domain (F) LPS07_15895 PF00453 Ribosomal protein L20 LPS07_15900 PF01632 Ribosomal protein L35 LPS07_15910 PF07690 Major Facilitator Superfamily LPS07_15915 PF09335 SNARE associated Golgi protein LPS07_15920 PF00043 Glutathione S-transferase, C-terminal domain LPS07_15920 PF02798 Glutathione S-transferase, N-terminal domain LPS07_15925 PF00707 Translation initiation factor IF-3, C-terminal domain LPS07_15925 PF05198 Translation initiation factor IF-3, N-terminal domain LPS07_15930 PF03129 Anticodon binding domain LPS07_15930 PF02824 TGS domain LPS07_15930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPS07_15930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPS07_15935 PF00501 AMP-binding enzyme LPS07_15935 PF13193 AMP-binding enzyme C-terminal domain LPS07_15940 PF04751 Protein of unknown function (DUF615) LPS07_15945 PF00381 PTS HPr component phosphorylation site LPS07_15950 PF03668 P-loop ATPase protein family LPS07_15955 PF02569 Pantoate-beta-alanine ligase LPS07_15960 PF02548 Ketopantoate hydroxymethyltransferase LPS07_15965 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPS07_15970 PF01743 Poly A polymerase head domain LPS07_15970 PF12627 Probable RNA and SrmB- binding site of polymerase A LPS07_15970 PF12626 Polymerase A arginine-rich C-terminus LPS07_15980 PF03819 MazG nucleotide pyrophosphohydrolase domain LPS07_15990 PF13291 ACT domain LPS07_15990 PF04607 Region found in RelA / SpoT proteins LPS07_15990 PF02824 TGS domain LPS07_15995 PF05958 tRNA (Uracil-5-)-methyltransferase LPS07_16005 PF00291 Pyridoxal-phosphate dependent enzyme LPS07_16010 PF01627 Hpt domain LPS07_16010 PF00672 HAMP domain LPS07_16010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_16010 PF00512 His Kinase A (phospho-acceptor) domain LPS07_16010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPS07_16010 PF00072 Response regulator receiver domain LPS07_16015 PF00378 Enoyl-CoA hydratase/isomerase LPS07_16020 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LPS07_16020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LPS07_16025 PF01261 Xylose isomerase-like TIM barrel LPS07_16035 PF00106 short chain dehydrogenase LPS07_16040 PF02233 NAD(P) transhydrogenase beta subunit LPS07_16045 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LPS07_16050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LPS07_16050 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LPS07_16055 PF00892 EamA-like transporter family LPS07_16065 PF07690 Major Facilitator Superfamily LPS07_16070 PF01207 Dihydrouridine synthase (Dus) LPS07_16080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_16080 PF03466 LysR substrate binding domain LPS07_16090 PF00899 ThiF family LPS07_16100 PF00694 Aconitase C-terminal domain LPS07_16100 PF00330 Aconitase family (aconitate hydratase) LPS07_16105 PF01026 TatD related DNase LPS07_16120 PF03144 Elongation factor Tu domain 2 LPS07_16120 PF00009 Elongation factor Tu GTP binding domain LPS07_16120 PF16658 Class II release factor RF3, C-terminal domain LPS07_16140 PF03707 Bacterial signalling protein N terminal repeat LPS07_16140 PF00990 Diguanylate cyclase, GGDEF domain LPS07_16140 PF00563 EAL domain LPS07_16145 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPS07_16145 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPS07_16150 PF10369 Small subunit of acetolactate synthase LPS07_16155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPS07_16155 PF00205 Thiamine pyrophosphate enzyme, central domain LPS07_16155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPS07_16160 PF09334 tRNA synthetases class I (M) LPS07_16160 PF13603 Leucyl-tRNA synthetase, Domain 2 LPS07_16160 PF08264 Anticodon-binding domain of tRNA LPS07_16160 PF00133 tRNA synthetases class I (I, L, M and V) LPS07_16175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPS07_16180 PF00005 ABC transporter LPS07_16180 PF02687 FtsX-like permease family LPS07_16180 PF12704 MacB-like periplasmic core domain LPS07_16185 PF02321 Outer membrane efflux protein LPS07_16200 PF00929 Exonuclease LPS07_16205 PF03193 RsgA GTPase LPS07_16215 PF00462 Glutaredoxin LPS07_16220 PF02556 Preprotein translocase subunit SecB LPS07_16230 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPS07_16230 PF01926 50S ribosome-binding GTPase LPS07_16235 PF01011 PQQ enzyme repeat LPS07_16235 PF13360 PQQ-like domain LPS07_16245 PF03129 Anticodon binding domain LPS07_16245 PF13393 Histidyl-tRNA synthetase LPS07_16250 PF04551 GcpE protein LPS07_16255 PF13464 Domain of unknown function (DUF4115) LPS07_16265 PF04055 Radical SAM superfamily LPS07_16270 PF00334 Nucleoside diphosphate kinase LPS07_16275 PF04384 Iron-sulphur cluster assembly LPS07_16280 PF01569 PAP2 superfamily LPS07_16285 PF00534 Glycosyl transferases group 1 LPS07_16285 PF13439 Glycosyltransferase Family 4 LPS07_16290 PF11818 C-terminal domain of tail specific protease (DUF3340) LPS07_16290 PF00595 PDZ domain LPS07_16290 PF03572 Peptidase family S41 LPS07_16290 PF17804 Tail specific protease N-terminal domain LPS07_16295 PF00933 Glycosyl hydrolase family 3 N terminal domain LPS07_16305 PF00561 alpha/beta hydrolase fold LPS07_16310 PF00171 Aldehyde dehydrogenase family LPS07_16315 PF00171 Aldehyde dehydrogenase family LPS07_16320 PF01202 Shikimate kinase LPS07_16325 PF02447 GntP family permease LPS07_16330 PF01081 KDPG and KHG aldolase LPS07_16335 PF00920 Dehydratase family LPS07_16345 PF00871 Acetokinase family LPS07_16350 PF07085 DRTGG domain LPS07_16350 PF01515 Phosphate acetyl/butaryl transferase LPS07_16355 PF05681 Fumarate hydratase (Fumerase) LPS07_16355 PF05683 Fumarase C-terminus LPS07_16370 PF07724 AAA domain (Cdc48 subfamily) LPS07_16370 PF10431 C-terminal, D2-small domain, of ClpB protein LPS07_16370 PF06689 ClpX C4-type zinc finger LPS07_16375 PF00574 Clp protease LPS07_16380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPS07_16380 PF05698 Bacterial trigger factor protein (TF) C-terminus LPS07_16380 PF05697 Bacterial trigger factor protein (TF) LPS07_16385 PF07715 TonB-dependent Receptor Plug Domain LPS07_16385 PF00593 TonB dependent receptor LPS07_16390 PF13640 2OG-Fe(II) oxygenase superfamily LPS07_16390 PF18331 PKHD-type hydroxylase C-terminal domain LPS07_16395 PF08502 LeuA allosteric (dimerisation) domain LPS07_16395 PF00682 HMGL-like LPS07_16400 PF00561 alpha/beta hydrolase fold LPS07_16405 PF00561 alpha/beta hydrolase fold LPS07_16405 PF07021 Methionine biosynthesis protein MetW LPS07_16415 PF01725 Ham1 family LPS07_16425 PF02416 mttA/Hcf106 family LPS07_16430 PF02416 mttA/Hcf106 family LPS07_16435 PF00902 Sec-independent protein translocase protein (TatC) LPS07_16455 PF01790 Prolipoprotein diacylglyceryl transferase LPS07_16470 PF00303 Thymidylate synthase LPS07_16475 PF00186 Dihydrofolate reductase LPS07_16485 PF01625 Peptide methionine sulfoxide reductase LPS07_16495 PF01618 MotA/TolQ/ExbB proton channel family LPS07_16505 PF01842 ACT domain LPS07_16505 PF00551 Formyl transferase LPS07_16515 PF00171 Aldehyde dehydrogenase family LPS07_16520 PF00830 Ribosomal L28 family LPS07_16525 PF00471 Ribosomal protein L33 LPS07_16530 PF02254 TrkA-N domain LPS07_16530 PF00999 Sodium/hydrogen exchanger family LPS07_16550 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LPS07_16555 PF13361 UvrD-like helicase C-terminal domain LPS07_16555 PF00580 UvrD/REP helicase N-terminal domain LPS07_16570 PF01131 DNA topoisomerase LPS07_16570 PF01751 Toprim domain LPS07_16570 PF01396 Topoisomerase DNA binding C4 zinc finger LPS07_16570 PF08272 Topoisomerase I zinc-ribbon-like LPS07_16580 PF01638 HxlR-like helix-turn-helix LPS07_16585 PF08240 Alcohol dehydrogenase GroES-like domain LPS07_16585 PF00107 Zinc-binding dehydrogenase LPS07_16590 PF04102 SlyX LPS07_16595 PF16326 ABC transporter C-terminal domain LPS07_16595 PF12848 ABC transporter LPS07_16595 PF00005 ABC transporter LPS07_16605 PF03279 Bacterial lipid A biosynthesis acyltransferase LPS07_16615 PF00375 Sodium:dicarboxylate symporter family LPS07_16625 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPS07_16625 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPS07_16645 PF01416 tRNA pseudouridine synthase LPS07_16655 PF01176 Translation initiation factor 1A / IF-1 LPS07_16670 PF00180 Isocitrate/isopropylmalate dehydrogenase LPS07_16680 PF00694 Aconitase C-terminal domain LPS07_16685 PF00330 Aconitase family (aconitate hydratase) LPS07_16695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_16695 PF03466 LysR substrate binding domain LPS07_16715 PF00293 NUDIX domain LPS07_16720 PF02896 PEP-utilising enzyme, TIM barrel domain LPS07_16720 PF00391 PEP-utilising enzyme, mobile domain LPS07_16720 PF01590 GAF domain LPS07_16720 PF05524 PEP-utilising enzyme, N-terminal LPS07_16725 PF00141 Peroxidase LPS07_16730 PF12706 Beta-lactamase superfamily domain LPS07_16735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_16735 PF03466 LysR substrate binding domain LPS07_16745 PF02798 Glutathione S-transferase, N-terminal domain LPS07_16750 PF08279 HTH domain LPS07_16750 PF13280 WYL domain LPS07_16755 PF13419 Haloacid dehalogenase-like hydrolase LPS07_16760 PF01479 S4 domain LPS07_16760 PF00849 RNA pseudouridylate synthase LPS07_16765 PF12111 Polyribonucleotide phosphorylase C terminal LPS07_16765 PF00575 S1 RNA binding domain LPS07_16765 PF10150 Ribonuclease E/G family LPS07_16770 PF13193 AMP-binding enzyme C-terminal domain LPS07_16770 PF00501 AMP-binding enzyme LPS07_16785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_16785 PF03466 LysR substrate binding domain LPS07_16795 PF04055 Radical SAM superfamily LPS07_16795 PF06969 HemN C-terminal domain LPS07_16805 PF01554 MatE LPS07_16810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_16810 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LPS07_16810 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_16815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_16815 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LPS07_16820 PF03109 ABC1 family LPS07_16825 PF01197 Ribosomal protein L31 LPS07_16835 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPS07_16845 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_16845 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPS07_16855 PF03884 DNA gyrase inhibitor YacG LPS07_16860 PF00753 Metallo-beta-lactamase superfamily LPS07_16865 PF00762 Ferrochelatase LPS07_16875 PF01177 Asp/Glu/Hydantoin racemase LPS07_16895 PF01206 Sulfurtransferase TusA LPS07_16900 PF00571 CBS domain LPS07_16900 PF03471 Transporter associated domain LPS07_16905 PF00795 Carbon-nitrogen hydrolase LPS07_16910 PF01588 Putative tRNA binding domain LPS07_16920 PF08334 Type II secretion system (T2SS), protein G LPS07_16920 PF07963 Prokaryotic N-terminal methylation motif LPS07_16925 PF00482 Type II secretion system (T2SS), protein F LPS07_16930 PF18074 Primosomal protein N C-terminal domain LPS07_16930 PF00271 Helicase conserved C-terminal domain LPS07_16930 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPS07_16930 PF17764 3′ DNA-binding domain (3′BD) LPS07_16930 PF00270 DEAD/DEAH box helicase LPS07_16935 PF02254 TrkA-N domain LPS07_16935 PF00999 Sodium/hydrogen exchanger family LPS07_16940 PF01430 Hsp33 protein LPS07_16950 PF01556 DnaJ C terminal domain LPS07_16950 PF00226 DnaJ domain LPS07_16960 PF01544 CorA-like Mg2+ transporter protein LPS07_16965 PF00013 KH domain LPS07_16965 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPS07_16965 PF01138 3' exoribonuclease family, domain 1 LPS07_16965 PF03725 3' exoribonuclease family, domain 2 LPS07_16965 PF00575 S1 RNA binding domain LPS07_16970 PF00312 Ribosomal protein S15 LPS07_16975 PF00144 Beta-lactamase LPS07_16980 PF13538 UvrD-like helicase C-terminal domain LPS07_16985 PF13361 UvrD-like helicase C-terminal domain LPS07_16985 PF00580 UvrD/REP helicase N-terminal domain LPS07_16985 PF12705 PD-(D/E)XK nuclease superfamily LPS07_16990 PF17946 RecC C-terminal domain LPS07_17000 PF03976 Polyphosphate kinase 2 (PPK2) LPS07_17010 PF01209 ubiE/COQ5 methyltransferase family LPS07_17020 PF03109 ABC1 family LPS07_17025 PF01494 FAD binding domain LPS07_17030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPS07_17035 PF01502 Phosphoribosyl-AMP cyclohydrolase LPS07_17050 PF13244 Domain of unknown function (DUF4040) LPS07_17050 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LPS07_17050 PF00361 Proton-conducting membrane transporter LPS07_17050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPS07_17055 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPS07_17060 PF00361 Proton-conducting membrane transporter LPS07_17065 PF01899 Na+/H+ ion antiporter subunit LPS07_17070 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LPS07_17075 PF03334 Na+/H+ antiporter subunit LPS07_17080 PF02033 Ribosome-binding factor A LPS07_17085 PF00009 Elongation factor Tu GTP binding domain LPS07_17085 PF11987 Translation-initiation factor 2 LPS07_17085 PF08364 Bacterial translation initiation factor IF-2 associated region LPS07_17085 PF04760 Translation initiation factor IF-2, N-terminal region LPS07_17090 PF13184 NusA-like KH domain LPS07_17090 PF08529 NusA N-terminal domain LPS07_17090 PF00575 S1 RNA binding domain LPS07_17095 PF17384 RimP C-terminal SH3 domain LPS07_17095 PF02576 RimP N-terminal domain LPS07_17115 PF03840 Preprotein translocase SecG subunit LPS07_17120 PF00121 Triosephosphate isomerase LPS07_17125 PF00437 Type II/IV secretion system protein LPS07_17125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPS07_17130 PF00482 Type II secretion system (T2SS), protein F LPS07_17135 PF06750 Bacterial Peptidase A24 N-terminal domain LPS07_17135 PF01478 Type IV leader peptidase family LPS07_17140 PF01121 Dephospho-CoA kinase LPS07_17150 PF00588 SpoU rRNA Methylase family LPS07_17150 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPS07_17155 PF06865 Pyrimidine/purine nucleoside phosphorylase LPS07_17165 PF02463 RecF/RecN/SMC N terminal domain LPS07_17170 PF02622 Uncharacterized ACR, COG1678 LPS07_17175 PF03652 Holliday junction resolvase LPS07_17180 PF13533 Biotin-lipoyl like LPS07_17210 PF12833 Helix-turn-helix domain LPS07_17210 PF02805 Metal binding domain of Ada LPS07_17210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPS07_17210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPS07_17220 PF01066 CDP-alcohol phosphatidyltransferase LPS07_17230 PF01541 GIY-YIG catalytic domain LPS07_17230 PF02151 UvrB/uvrC motif LPS07_17230 PF08459 UvrC Helix-hairpin-helix N-terminal LPS07_17255 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LPS07_17255 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LPS07_17255 PF00378 Enoyl-CoA hydratase/isomerase LPS07_17260 PF02803 Thiolase, C-terminal domain LPS07_17260 PF00108 Thiolase, N-terminal domain LPS07_17280 PF00376 MerR family regulatory protein LPS07_17280 PF09278 MerR, DNA binding LPS07_17290 PF01323 DSBA-like thioredoxin domain LPS07_17305 PF00183 Hsp90 protein LPS07_17305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_17320 PF13726 Na+-H+ antiporter family LPS07_17320 PF03553 Na+/H+ antiporter family LPS07_17345 PF04997 RNA polymerase Rpb1, domain 1 LPS07_17345 PF00623 RNA polymerase Rpb1, domain 2 LPS07_17345 PF04983 RNA polymerase Rpb1, domain 3 LPS07_17345 PF05000 RNA polymerase Rpb1, domain 4 LPS07_17345 PF04998 RNA polymerase Rpb1, domain 5 LPS07_17350 PF04563 RNA polymerase beta subunit LPS07_17350 PF04561 RNA polymerase Rpb2, domain 2 LPS07_17350 PF04565 RNA polymerase Rpb2, domain 3 LPS07_17350 PF10385 RNA polymerase beta subunit external 1 domain LPS07_17350 PF04560 RNA polymerase Rpb2, domain 7 LPS07_17350 PF00562 RNA polymerase Rpb2, domain 6 LPS07_17355 PF00542 Ribosomal protein L7/L12 C-terminal domain LPS07_17355 PF16320 Ribosomal protein L7/L12 dimerisation domain LPS07_17360 PF00466 Ribosomal protein L10 LPS07_17365 PF00687 Ribosomal protein L1p/L10e family LPS07_17370 PF00298 Ribosomal protein L11, RNA binding domain LPS07_17370 PF03946 Ribosomal protein L11, N-terminal domain LPS07_17375 PF00467 KOW motif LPS07_17375 PF02357 Transcription termination factor nusG LPS07_17380 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPS07_17390 PF03143 Elongation factor Tu C-terminal domain LPS07_17390 PF03144 Elongation factor Tu domain 2 LPS07_17390 PF00009 Elongation factor Tu GTP binding domain LPS07_17415 PF04715 Anthranilate synthase component I, N terminal region LPS07_17415 PF00425 chorismate binding enzyme LPS07_17420 PF13419 Haloacid dehalogenase-like hydrolase LPS07_17425 PF00498 FHA domain LPS07_17425 PF12401 Protein of unknown function (DUF2662) LPS07_17430 PF00263 Bacterial type II and III secretion system protein LPS07_17430 PF03958 Bacterial type II/III secretion system short domain LPS07_17445 PF00816 H-NS histone family LPS07_17470 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPS07_17470 PF03900 Porphobilinogen deaminase, C-terminal domain LPS07_17475 PF00072 Response regulator receiver domain LPS07_17475 PF04397 LytTr DNA-binding domain LPS07_17480 PF07694 5TMR of 5TMR-LYT LPS07_17480 PF06580 Histidine kinase LPS07_17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_17485 PF00206 Lyase LPS07_17485 PF14698 Argininosuccinate lyase C-terminal LPS07_17490 PF04362 Bacterial Fe(2+) trafficking LPS07_17495 PF01895 PhoU domain LPS07_17500 PF02321 Outer membrane efflux protein LPS07_17510 PF00892 EamA-like transporter family LPS07_17525 PF13667 ThiC-associated domain LPS07_17525 PF01964 Radical SAM ThiC family LPS07_17530 PF00293 NUDIX domain LPS07_17535 PF00149 Calcineurin-like phosphoesterase LPS07_17540 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPS07_17545 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPS07_17550 PF01098 Cell cycle protein LPS07_17555 PF02875 Mur ligase family, glutamate ligase domain LPS07_17555 PF08245 Mur ligase middle domain LPS07_17565 PF07664 Ferrous iron transport protein B C terminus LPS07_17565 PF02421 Ferrous iron transport protein B LPS07_17565 PF07670 Nucleoside recognition LPS07_17575 PF02899 Phage integrase, N-terminal SAM-like domain LPS07_17575 PF00589 Phage integrase family LPS07_17580 PF13098 Thioredoxin-like domain LPS07_17580 PF10411 Disulfide bond isomerase protein N-terminus LPS07_17585 PF01842 ACT domain LPS07_17585 PF00742 Homoserine dehydrogenase LPS07_17585 PF03447 Homoserine dehydrogenase, NAD binding domain LPS07_17590 PF00291 Pyridoxal-phosphate dependent enzyme LPS07_17595 PF00768 D-alanyl-D-alanine carboxypeptidase LPS07_17600 PF00072 Response regulator receiver domain LPS07_17600 PF00196 Bacterial regulatory proteins, luxR family LPS07_17605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPS07_17605 PF00512 His Kinase A (phospho-acceptor) domain LPS07_17610 PF02954 Bacterial regulatory protein, Fis family LPS07_17610 PF00072 Response regulator receiver domain LPS07_17610 PF00158 Sigma-54 interaction domain LPS07_17615 PF03572 Peptidase family S41 LPS07_17615 PF00595 PDZ domain LPS07_17620 PF01676 Metalloenzyme superfamily LPS07_17620 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LPS07_17625 PF03739 Lipopolysaccharide export system permease LptF/LptG LPS07_17635 PF02789 Cytosol aminopeptidase family, N-terminal domain LPS07_17635 PF00883 Cytosol aminopeptidase family, catalytic domain LPS07_17655 PF00677 Lumazine binding domain LPS07_17665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPS07_17665 PF01872 RibD C-terminal domain LPS07_17670 PF03477 ATP cone domain LPS07_17675 PF00909 Ammonium Transporter Family LPS07_17680 PF00543 Nitrogen regulatory protein P-II LPS07_17690 PF01078 Magnesium chelatase, subunit ChlI LPS07_17690 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPS07_17695 PF03358 NADPH-dependent FMN reductase LPS07_17700 PF00155 Aminotransferase class I and II LPS07_17700 PF00392 Bacterial regulatory proteins, gntR family LPS07_17705 PF00596 Class II Aldolase and Adducin N-terminal domain LPS07_17710 PF00701 Dihydrodipicolinate synthetase family LPS07_17725 PF03573 outer membrane porin, OprD family LPS07_17730 PF00719 Inorganic pyrophosphatase LPS07_17745 PF13193 AMP-binding enzyme C-terminal domain LPS07_17745 PF00501 AMP-binding enzyme LPS07_17750 PF03989 DNA gyrase C-terminal domain, beta-propeller LPS07_17750 PF00521 DNA gyrase/topoisomerase IV, subunit A LPS07_17755 PF07690 Major Facilitator Superfamily LPS07_17760 PF03458 UPF0126 domain LPS07_17765 PF02810 SEC-C motif LPS07_17770 PF03471 Transporter associated domain LPS07_17770 PF03741 Integral membrane protein TerC family LPS07_17775 PF03641 Possible lysine decarboxylase LPS07_17780 PF07690 Major Facilitator Superfamily LPS07_17785 PF01183 Glycosyl hydrolases family 25 LPS07_17790 PF11798 IMS family HHH motif LPS07_17790 PF11799 impB/mucB/samB family C-terminal domain LPS07_17790 PF00817 impB/mucB/samB family LPS07_17810 PF08497 Radical SAM N-terminal LPS07_17810 PF04055 Radical SAM superfamily LPS07_17810 PF11842 Domain of unknown function (DUF3362) LPS07_17830 PF03358 NADPH-dependent FMN reductase LPS07_17845 PF00291 Pyridoxal-phosphate dependent enzyme LPS07_17900 PF01327 Polypeptide deformylase LPS07_17910 PF17782 DprA winged helix domain LPS07_17910 PF02481 DNA recombination-mediator protein A LPS07_17915 PF01300 Telomere recombination LPS07_17920 PF00892 EamA-like transporter family LPS07_17925 PF00440 Bacterial regulatory proteins, tetR family LPS07_17930 PF07690 Major Facilitator Superfamily LPS07_17940 PF00255 Glutathione peroxidase LPS07_17950 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPS07_17955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPS07_17955 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPS07_17960 PF00231 ATP synthase LPS07_17965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPS07_17965 PF00306 ATP synthase alpha/beta chain, C terminal domain LPS07_17965 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPS07_17970 PF00213 ATP synthase delta (OSCP) subunit LPS07_17975 PF00430 ATP synthase B/B' CF(0) LPS07_17980 PF00137 ATP synthase subunit C LPS07_17985 PF00119 ATP synthase A chain LPS07_18005 PF00005 ABC transporter LPS07_18010 PF00950 ABC 3 transport family LPS07_18015 PF01810 LysE type translocator LPS07_18020 PF04261 Dyp-type peroxidase family LPS07_18025 PF03949 Malic enzyme, NAD binding domain LPS07_18025 PF00390 Malic enzyme, N-terminal domain LPS07_18030 PF03485 Arginyl tRNA synthetase N terminal domain LPS07_18030 PF05746 DALR anticodon binding domain LPS07_18030 PF00750 tRNA synthetases class I (R) LPS07_18050 PF02678 Pirin LPS07_18050 PF05726 Pirin C-terminal cupin domain LPS07_18060 PF03551 Transcriptional regulator PadR-like family LPS07_18065 PF02540 NAD synthase LPS07_18065 PF00117 Glutamine amidotransferase class-I LPS07_18065 PF00958 GMP synthase C terminal domain LPS07_18070 PF04286 Protein of unknown function (DUF445) LPS07_18075 PF07681 DoxX LPS07_18080 PF09335 SNARE associated Golgi protein LPS07_18095 PF13614 AAA domain LPS07_18105 PF01722 BolA-like protein LPS07_18120 PF01648 4'-phosphopantetheinyl transferase superfamily LPS07_18125 PF16363 GDP-mannose 4,6 dehydratase LPS07_18140 PF00501 AMP-binding enzyme LPS07_18140 PF13193 AMP-binding enzyme C-terminal domain LPS07_18140 PF00668 Condensation domain LPS07_18140 PF00550 Phosphopantetheine attachment site LPS07_18140 PF00975 Thioesterase domain LPS07_18145 PF00975 Thioesterase domain LPS07_18145 PF14765 Polyketide synthase dehydratase LPS07_18145 PF00550 Phosphopantetheine attachment site LPS07_18145 PF02801 Beta-ketoacyl synthase, C-terminal domain LPS07_18145 PF00109 Beta-ketoacyl synthase, N-terminal domain LPS07_18145 PF08242 Methyltransferase domain LPS07_18145 PF16197 Ketoacyl-synthetase C-terminal extension LPS07_18150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_18150 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_18150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_18155 PF00501 AMP-binding enzyme LPS07_18160 PF03472 Autoinducer binding domain LPS07_18160 PF00196 Bacterial regulatory proteins, luxR family LPS07_18170 PF00765 Autoinducer synthase LPS07_18175 PF00155 Aminotransferase class I and II LPS07_18175 PF00392 Bacterial regulatory proteins, gntR family LPS07_18185 PF01266 FAD dependent oxidoreductase LPS07_18190 PF00324 Amino acid permease LPS07_18195 PF00892 EamA-like transporter family LPS07_18200 PF07690 Major Facilitator Superfamily LPS07_18200 PF00083 Sugar (and other) transporter LPS07_18205 PF00378 Enoyl-CoA hydratase/isomerase LPS07_18210 PF00378 Enoyl-CoA hydratase/isomerase LPS07_18215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LPS07_18215 PF02770 Acyl-CoA dehydrogenase, middle domain LPS07_18215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LPS07_18220 PF13193 AMP-binding enzyme C-terminal domain LPS07_18220 PF00501 AMP-binding enzyme LPS07_18225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LPS07_18225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LPS07_18230 PF00171 Aldehyde dehydrogenase family LPS07_18240 PF00324 Amino acid permease LPS07_18245 PF00324 Amino acid permease LPS07_18250 PF01042 Endoribonuclease L-PSP LPS07_18255 PF01168 Alanine racemase, N-terminal domain LPS07_18255 PF00842 Alanine racemase, C-terminal domain LPS07_18260 PF01266 FAD dependent oxidoreductase LPS07_18265 PF01037 Lrp/AsnC ligand binding domain LPS07_18275 PF07715 TonB-dependent Receptor Plug Domain LPS07_18275 PF00593 TonB dependent receptor LPS07_18290 PF00849 RNA pseudouridylate synthase LPS07_18350 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LPS07_18350 PF04717 Type VI secretion system, phage-baseplate injector LPS07_18350 PF13296 Putative type VI secretion system Rhs element Vgr LPS07_18355 PF00109 Beta-ketoacyl synthase, N-terminal domain LPS07_18355 PF02801 Beta-ketoacyl synthase, C-terminal domain LPS07_18370 PF00293 NUDIX domain LPS07_18395 PF00694 Aconitase C-terminal domain LPS07_18395 PF00330 Aconitase family (aconitate hydratase) LPS07_18400 PF00285 Citrate synthase, C-terminal domain LPS07_18410 PF00392 Bacterial regulatory proteins, gntR family LPS07_18410 PF07729 FCD domain LPS07_18420 PF00155 Aminotransferase class I and II LPS07_18425 PF01565 FAD binding domain LPS07_18425 PF09330 D-lactate dehydrogenase, membrane binding LPS07_18430 PF01070 FMN-dependent dehydrogenase LPS07_18435 PF07729 FCD domain LPS07_18435 PF00392 Bacterial regulatory proteins, gntR family LPS07_18440 PF02652 L-lactate permease LPS07_18445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPS07_18445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPS07_18445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPS07_18445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPS07_18450 PF00342 Phosphoglucose isomerase LPS07_18455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPS07_18455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPS07_18455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPS07_18460 PF00483 Nucleotidyl transferase LPS07_18465 PF02397 Bacterial sugar transferase LPS07_18475 PF00535 Glycosyl transferase family 2 LPS07_18485 PF00535 Glycosyl transferase family 2 LPS07_18490 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPS07_18495 PF00483 Nucleotidyl transferase LPS07_18500 PF04321 RmlD substrate binding domain LPS07_18505 PF16363 GDP-mannose 4,6 dehydratase LPS07_18510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPS07_18510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPS07_18510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPS07_18520 PF00535 Glycosyl transferase family 2 LPS07_18520 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LPS07_18530 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPS07_18530 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPS07_18530 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPS07_18535 PF10531 SLBB domain LPS07_18535 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LPS07_18535 PF02563 Polysaccharide biosynthesis/export protein LPS07_18540 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPS07_18545 PF13614 AAA domain LPS07_18545 PF13807 G-rich domain on putative tyrosine kinase LPS07_18545 PF02706 Chain length determinant protein LPS07_18550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPS07_18550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPS07_18555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPS07_18555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPS07_18560 PF03023 Lipid II flippase MurJ LPS07_18565 PF01510 N-acetylmuramoyl-L-alanine amidase LPS07_18570 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPS07_18570 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPS07_18580 PF05506 Domain of unknown function (DUF756) LPS07_18580 PF04185 Phosphoesterase family LPS07_18585 PF01138 3' exoribonuclease family, domain 1 LPS07_18585 PF03725 3' exoribonuclease family, domain 2 LPS07_18590 PF00487 Fatty acid desaturase LPS07_18595 PF00175 Oxidoreductase NAD-binding domain LPS07_18600 PF00440 Bacterial regulatory proteins, tetR family LPS07_18605 PF00440 Bacterial regulatory proteins, tetR family LPS07_18605 PF08360 QacR-like protein, C-terminal region LPS07_18610 PF01323 DSBA-like thioredoxin domain LPS07_18620 PF13419 Haloacid dehalogenase-like hydrolase LPS07_18625 PF00106 short chain dehydrogenase LPS07_18640 PF00696 Amino acid kinase family LPS07_18640 PF00583 Acetyltransferase (GNAT) family LPS07_18645 PF09084 NMT1/THI5 like LPS07_18650 PF09084 NMT1/THI5 like LPS07_18655 PF00296 Luciferase-like monooxygenase LPS07_18660 PF00528 Binding-protein-dependent transport system inner membrane component LPS07_18665 PF00005 ABC transporter LPS07_18670 PF08362 YcdC-like protein, C-terminal region LPS07_18670 PF00440 Bacterial regulatory proteins, tetR family LPS07_18675 PF01048 Phosphorylase superfamily LPS07_18685 PF06574 FAD synthetase LPS07_18685 PF01687 Riboflavin kinase LPS07_18690 PF08264 Anticodon-binding domain of tRNA LPS07_18690 PF00133 tRNA synthetases class I (I, L, M and V) LPS07_18690 PF06827 Zinc finger found in FPG and IleRS LPS07_18695 PF01252 Signal peptidase (SPase) II LPS07_18700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPS07_18740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPS07_18745 PF07859 alpha/beta hydrolase fold LPS07_18765 PF03466 LysR substrate binding domain LPS07_18765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPS07_18770 PF01025 GrpE LPS07_18775 PF00012 Hsp70 protein LPS07_18795 PF13406 Transglycosylase SLT domain LPS07_18800 PF02222 ATP-grasp domain LPS07_18800 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPS07_18805 PF00731 AIR carboxylase LPS07_18815 PF01225 Mur ligase family, catalytic domain LPS07_18815 PF02875 Mur ligase family, glutamate ligase domain LPS07_18815 PF08245 Mur ligase middle domain LPS07_18825 PF01569 PAP2 superfamily LPS07_18830 PF03741 Integral membrane protein TerC family LPS07_18840 PF03738 Glutathionylspermidine synthase preATP-grasp LPS07_18845 PF00355 Rieske [2Fe-2S] domain LPS07_18850 PF01979 Amidohydrolase family LPS07_18855 PF00156 Phosphoribosyl transferase domain LPS07_18865 PF10411 Disulfide bond isomerase protein N-terminus LPS07_18865 PF13098 Thioredoxin-like domain LPS07_18870 PF16916 Dimerisation domain of Zinc Transporter LPS07_18870 PF01545 Cation efflux family LPS07_18875 PF02583 Metal-sensitive transcriptional repressor LPS07_18880 PF01926 50S ribosome-binding GTPase LPS07_18880 PF12631 MnmE helical domain LPS07_18880 PF10396 GTP-binding protein TrmE N-terminus LPS07_18885 PF02096 60Kd inner membrane protein LPS07_18885 PF14849 YidC periplasmic domain LPS07_18890 PF01809 Putative membrane protein insertion efficiency factor LPS07_18895 PF00825 Ribonuclease P LPS07_18900 PF00468 Ribosomal protein L34 LPS07_18940 PF01131 DNA topoisomerase LPS07_18940 PF01751 Toprim domain LPS07_18940 PF01396 Topoisomerase DNA binding C4 zinc finger LPS07_19000 PF02899 Phage integrase, N-terminal SAM-like domain LPS07_19000 PF00589 Phage integrase family LPS07_19020 PF13358 DDE superfamily endonuclease LPS07_19025 PF02522 Aminoglycoside 3-N-acetyltransferase LPS07_19075 PF01435 Peptidase family M48 LPS07_19265 PF01545 Cation efflux family LPS07_19265 PF16916 Dimerisation domain of Zinc Transporter LPS07_19280 PF02321 Outer membrane efflux protein LPS07_19285 PF00873 AcrB/AcrD/AcrF family LPS07_19290 PF00529 HlyD membrane-fusion protein of T1SS LPS07_19290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPS07_19295 PF01545 Cation efflux family LPS07_19305 PF01022 Bacterial regulatory protein, arsR family LPS07_19310 PF00403 Heavy-metal-associated domain LPS07_19315 PF09278 MerR, DNA binding LPS07_19315 PF00376 MerR family regulatory protein LPS07_19335 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_19390 PF00580 UvrD/REP helicase N-terminal domain LPS07_19390 PF13361 UvrD-like helicase C-terminal domain LPS07_19420 PF13614 AAA domain LPS07_19425 PF02195 ParB-like nuclease domain LPS07_19425 PF17762 HTH domain found in ParB protein LPS07_19440 PF00437 Type II/IV secretion system protein LPS07_19575 PF13005 zinc-finger binding domain of transposase IS66 LPS07_19575 PF13007 Transposase C of IS166 homeodomain LPS07_19575 PF13817 IS66 C-terminal element LPS07_19575 PF03050 Transposase IS66 family LPS07_19625 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPS07_19640 PF00462 Glutaredoxin LPS07_19645 PF00111 2Fe-2S iron-sulfur cluster binding domain LPS07_19645 PF00175 Oxidoreductase NAD-binding domain LPS07_19645 PF00970 Oxidoreductase FAD-binding domain LPS07_19650 PF00174 Oxidoreductase molybdopterin binding domain LPS07_19670 PF08240 Alcohol dehydrogenase GroES-like domain LPS07_19670 PF00107 Zinc-binding dehydrogenase LPS07_19685 PF02798 Glutathione S-transferase, N-terminal domain LPS07_19685 PF00043 Glutathione S-transferase, C-terminal domain LPS07_19690 PF01625 Peptide methionine sulfoxide reductase LPS07_19695 PF01641 SelR domain LPS07_19700 PF01695 IstB-like ATP binding protein LPS07_19710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPS07_19710 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_19740 PF00717 Peptidase S24-like LPS07_19745 PF13438 Domain of unknown function (DUF4113) LPS07_19745 PF00817 impB/mucB/samB family LPS07_19745 PF11799 impB/mucB/samB family C-terminal domain LPS07_19745 PF11798 IMS family HHH motif LPS07_19755 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPS07_19765 PF00753 Metallo-beta-lactamase superfamily LPS07_19805 PF01636 Phosphotransferase enzyme family LPS07_19845 PF00313 'Cold-shock' DNA-binding domain LPS07_19880 PF13737 Transposase DDE domain LPS07_19890 PF02661 Fic/DOC family LPS07_19890 PF17841 BID domain of Bartonella effector protein (Bep) LPS07_20000 PF00563 EAL domain LPS07_20000 PF11809 Domain of unknown function (DUF3330) LPS07_20005 PF05052 MerE protein LPS07_20010 PF13411 MerR HTH family regulatory protein LPS07_20015 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPS07_20015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPS07_20015 PF00403 Heavy-metal-associated domain LPS07_20025 PF00403 Heavy-metal-associated domain LPS07_20030 PF02411 MerT mercuric transport protein LPS07_20035 PF00376 MerR family regulatory protein LPS07_20035 PF09278 MerR, DNA binding LPS07_20120 PF00565 Staphylococcal nuclease homologue LPS07_20130 PF01555 DNA methylase LPS07_20155 PF12833 Helix-turn-helix domain LPS07_20155 PF02311 AraC-like ligand binding domain LPS07_20160 PF01625 Peptide methionine sulfoxide reductase LPS07_20170 PF00462 Glutaredoxin LPS07_20175 PF01641 SelR domain LPS07_20190 PF00108 Thiolase, N-terminal domain LPS07_20190 PF02803 Thiolase, C-terminal domain LPS07_20195 PF01625 Peptide methionine sulfoxide reductase LPS07_20200 PF00990 Diguanylate cyclase, GGDEF domain LPS07_20215 PF01625 Peptide methionine sulfoxide reductase LPS07_20230 PF01695 IstB-like ATP binding protein LPS07_20235 PF01381 Helix-turn-helix LPS07_20250 PF02384 N-6 DNA Methylase LPS07_20250 PF12161 HsdM N-terminal domain LPS07_20255 PF01420 Type I restriction modification DNA specificity domain LPS07_20270 PF18766 SWI2/SNF2 ATPase LPS07_20270 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPS07_20270 PF11867 Domain of unknown function (DUF3387) LPS07_20290 PF01555 DNA methylase LPS07_20295 PF04851 Type III restriction enzyme, res subunit LPS07_20325 PF05973 Phage derived protein Gp49-like (DUF891) LPS07_20330 PF01381 Helix-turn-helix LPS07_20350 PF00005 ABC transporter LPS07_20350 PF12848 ABC transporter LPS07_20355 PF01636 Phosphotransferase enzyme family LPS07_20360 PF02796 Helix-turn-helix domain of resolvase LPS07_20360 PF00239 Resolvase, N terminal domain LPS07_20365 PF07690 Major Facilitator Superfamily LPS07_20370 PF02909 Tetracyclin repressor-like, C-terminal domain LPS07_20370 PF00440 Bacterial regulatory proteins, tetR family LPS07_20375 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LPS07_20375 PF13542 Helix-turn-helix domain of transposase family ISL3 LPS07_20375 PF01610 Transposase LPS07_20385 PF07669 Eco57I restriction-modification methylase LPS07_20390 PF06616 BsuBI/PstI restriction endonuclease domain LPS07_20390 PF17728 BsuBI/PstI restriction endonuclease HTH domain LPS07_20415 PF00809 Pterin binding enzyme LPS07_20425 PF13737 Transposase DDE domain LPS07_20430 PF01636 Phosphotransferase enzyme family LPS07_20435 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LPS07_20440 PF05973 Phage derived protein Gp49-like (DUF891) LPS07_20485 PF01051 Initiator Replication protein LPS07_20490 PF13614 AAA domain LPS07_20515 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPS07_20525 PF00239 Resolvase, N terminal domain LPS07_20525 PF02796 Helix-turn-helix domain of resolvase