locus-tag class description AYJ52_00010 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AYJ52_00015 PF00588 SpoU rRNA Methylase family AYJ52_00015 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYJ52_00040 PF13340 Putative transposase of IS4/5 family (DUF4096) AYJ52_00055 PF11638 DnaA N-terminal domain AYJ52_00055 PF08299 Bacterial dnaA protein helix-turn-helix AYJ52_00055 PF00308 Bacterial dnaA protein AYJ52_00060 PF01594 AI-2E family transporter AYJ52_00065 PF02769 AIR synthase related protein, C-terminal domain AYJ52_00065 PF00586 AIR synthase related protein, N-terminal domain AYJ52_00070 PF00551 Formyl transferase AYJ52_00075 PF12697 Alpha/beta hydrolase family AYJ52_00080 PF01343 Peptidase family S49 AYJ52_00080 PF06965 Na+/H+ antiporter 1 AYJ52_00090 PF00753 Metallo-beta-lactamase superfamily AYJ52_00090 PF13567 Domain of unknown function (DUF4131) AYJ52_00090 PF03772 Competence protein AYJ52_00095 PF00005 ABC transporter AYJ52_00100 PF02687 FtsX-like permease family AYJ52_00100 PF12704 MacB-like periplasmic core domain AYJ52_00110 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AYJ52_00120 PF13276 HTH-like domain AYJ52_00120 PF13333 Integrase core domain AYJ52_00120 PF00665 Integrase core domain AYJ52_00130 PF00266 Aminotransferase class-V AYJ52_00140 PF13533 Biotin-lipoyl like AYJ52_00155 PF00521 DNA gyrase/topoisomerase IV, subunit A AYJ52_00155 PF03989 DNA gyrase C-terminal domain, beta-propeller AYJ52_00160 PF01012 Electron transfer flavoprotein domain AYJ52_00160 PF00766 Electron transfer flavoprotein FAD-binding domain AYJ52_00165 PF01012 Electron transfer flavoprotein domain AYJ52_00170 PF02899 Phage integrase, N-terminal SAM-like domain AYJ52_00170 PF00589 Phage integrase family AYJ52_00175 PF01810 LysE type translocator AYJ52_00185 PF01678 Diaminopimelate epimerase AYJ52_00190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AYJ52_00190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AYJ52_00200 PF00324 Amino acid permease AYJ52_00205 PF01235 Sodium:alanine symporter family AYJ52_00210 PF18073 Rubredoxin metal binding domain AYJ52_00220 PF00152 tRNA synthetases class II (D, K and N) AYJ52_00225 PF11890 Domain of unknown function (DUF3410) AYJ52_00225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYJ52_00225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYJ52_00235 PF02634 FdhD/NarQ family AYJ52_00245 PF02595 Glycerate kinase family AYJ52_00260 PF00881 Nitroreductase family AYJ52_00275 PF03180 NLPA lipoprotein AYJ52_00285 PF01272 Transcription elongation factor, GreA/GreB, C-term AYJ52_00285 PF03449 Transcription elongation factor, N-terminal AYJ52_00290 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYJ52_00290 PF01464 Transglycosylase SLT domain AYJ52_00300 PF01171 PP-loop family AYJ52_00310 PF01464 Transglycosylase SLT domain AYJ52_00315 PF01435 Peptidase family M48 AYJ52_00325 PF00873 AcrB/AcrD/AcrF family AYJ52_00330 PF03009 Glycerophosphoryl diester phosphodiesterase family AYJ52_00340 PF01219 Prokaryotic diacylglycerol kinase AYJ52_00345 PF14659 Phage integrase, N-terminal SAM-like domain AYJ52_00345 PF00589 Phage integrase family AYJ52_00345 PF13356 Arm DNA-binding domain AYJ52_00355 PF01527 Transposase AYJ52_00360 PF13276 HTH-like domain AYJ52_00360 PF13333 Integrase core domain AYJ52_00360 PF00665 Integrase core domain AYJ52_00375 PF09828 Chromate resistance exported protein AYJ52_00380 PF02417 Chromate transporter AYJ52_00390 PF13340 Putative transposase of IS4/5 family (DUF4096) AYJ52_00395 PF07690 Major Facilitator Superfamily AYJ52_00415 PF00873 AcrB/AcrD/AcrF family AYJ52_00420 PF00529 HlyD membrane-fusion protein of T1SS AYJ52_00420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYJ52_00435 PF00665 Integrase core domain AYJ52_00435 PF13936 Helix-turn-helix domain AYJ52_00445 PF00753 Metallo-beta-lactamase superfamily AYJ52_00445 PF14864 Alkyl sulfatase C-terminal AYJ52_00445 PF14863 Alkyl sulfatase dimerisation AYJ52_00450 PF00665 Integrase core domain AYJ52_00450 PF13936 Helix-turn-helix domain AYJ52_00495 PF03389 MobA/MobL family AYJ52_00510 PF00118 TCP-1/cpn60 chaperonin family AYJ52_00515 PF00166 Chaperonin 10 Kd subunit AYJ52_00525 PF00149 Calcineurin-like phosphoesterase AYJ52_00530 PF00781 Diacylglycerol kinase catalytic domain AYJ52_00535 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AYJ52_00535 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AYJ52_00540 PF01266 FAD dependent oxidoreductase AYJ52_00540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AYJ52_00545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AYJ52_00545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AYJ52_00550 PF00083 Sugar (and other) transporter AYJ52_00565 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AYJ52_00565 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AYJ52_00580 PF16655 PhoD-like phosphatase, N-terminal domain AYJ52_00580 PF09423 PhoD-like phosphatase AYJ52_00600 PF00809 Pterin binding enzyme AYJ52_00605 PF06480 FtsH Extracellular AYJ52_00605 PF01434 Peptidase family M41 AYJ52_00605 PF17862 AAA+ lid domain AYJ52_00605 PF00004 ATPase family associated with various cellular activities (AAA) AYJ52_00610 PF01728 FtsJ-like methyltransferase AYJ52_00615 PF01985 CRS1 / YhbY (CRM) domain AYJ52_00630 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AYJ52_00630 PF00117 Glutamine amidotransferase class-I AYJ52_00635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYJ52_00635 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYJ52_00635 PF02142 MGS-like domain AYJ52_00640 PF01272 Transcription elongation factor, GreA/GreB, C-term AYJ52_00640 PF03449 Transcription elongation factor, N-terminal AYJ52_00645 PF00440 Bacterial regulatory proteins, tetR family AYJ52_00650 PF01042 Endoribonuclease L-PSP AYJ52_00655 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_00660 PF00582 Universal stress protein family AYJ52_00670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYJ52_00680 PF09587 Bacterial capsule synthesis protein PGA_cap AYJ52_00695 PF00665 Integrase core domain AYJ52_00695 PF13936 Helix-turn-helix domain AYJ52_00705 PF00999 Sodium/hydrogen exchanger family AYJ52_00710 PF04228 Putative neutral zinc metallopeptidase AYJ52_00715 PF05661 Protein of unknown function (DUF808) AYJ52_00720 PF00579 tRNA synthetases class I (W and Y) AYJ52_00725 PF00549 CoA-ligase AYJ52_00725 PF02629 CoA binding domain AYJ52_00730 PF00549 CoA-ligase AYJ52_00730 PF08442 ATP-grasp domain AYJ52_00735 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_00735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYJ52_00740 PF00364 Biotin-requiring enzyme AYJ52_00740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYJ52_00740 PF02817 e3 binding domain AYJ52_00745 PF02779 Transketolase, pyrimidine binding domain AYJ52_00745 PF16870 2-oxoglutarate dehydrogenase C-terminal AYJ52_00745 PF16078 2-oxoglutarate dehydrogenase N-terminus AYJ52_00745 PF00676 Dehydrogenase E1 component AYJ52_00755 PF13085 2Fe-2S iron-sulfur cluster binding domain AYJ52_00760 PF00890 FAD binding domain AYJ52_00760 PF02910 Fumarate reductase flavoprotein C-term AYJ52_00765 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AYJ52_00770 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AYJ52_00775 PF00285 Citrate synthase, C-terminal domain AYJ52_00805 PF04542 Sigma-70 region 2 AYJ52_00805 PF04545 Sigma-70, region 4 AYJ52_00805 PF04539 Sigma-70 region 3 AYJ52_00805 PF00140 Sigma-70 factor, region 1.2 AYJ52_00805 PF03979 Sigma-70 factor, region 1.1 AYJ52_00805 PF04546 Sigma-70, non-essential region AYJ52_00810 PF04359 Protein of unknown function (DUF493) AYJ52_00815 PF03099 Biotin/lipoate A/B protein ligase family AYJ52_00825 PF00465 Iron-containing alcohol dehydrogenase AYJ52_00830 PF13520 Amino acid permease AYJ52_00835 PF03358 NADPH-dependent FMN reductase AYJ52_00865 PF00588 SpoU rRNA Methylase family AYJ52_00870 PF10414 Sirohaem synthase dimerisation region AYJ52_00870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYJ52_00870 PF14824 Sirohaem biosynthesis protein central AYJ52_00875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYJ52_00875 PF02403 Seryl-tRNA synthetase N-terminal domain AYJ52_00885 PF03548 Outer membrane lipoprotein carrier protein LolA AYJ52_00890 PF01016 Ribosomal L27 protein AYJ52_00895 PF00829 Ribosomal prokaryotic L21 protein AYJ52_00900 PF00348 Polyprenyl synthetase AYJ52_00910 PF01569 PAP2 superfamily AYJ52_00915 PF00529 HlyD membrane-fusion protein of T1SS AYJ52_00915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYJ52_00920 PF00873 AcrB/AcrD/AcrF family AYJ52_00925 PF02321 Outer membrane efflux protein AYJ52_00930 PF01906 Putative heavy-metal-binding AYJ52_00935 PF01906 Putative heavy-metal-binding AYJ52_00955 PF00133 tRNA synthetases class I (I, L, M and V) AYJ52_00955 PF08264 Anticodon-binding domain of tRNA AYJ52_00955 PF10458 Valyl tRNA synthetase tRNA binding arm AYJ52_00965 PF01527 Transposase AYJ52_00970 PF00665 Integrase core domain AYJ52_00970 PF13333 Integrase core domain AYJ52_00970 PF13276 HTH-like domain AYJ52_00990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_00990 PF03466 LysR substrate binding domain AYJ52_00995 PF00909 Ammonium Transporter Family AYJ52_01005 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_01005 PF08521 Two-component sensor kinase N-terminal AYJ52_01005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_01010 PF00486 Transcriptional regulatory protein, C terminal AYJ52_01010 PF00072 Response regulator receiver domain AYJ52_01015 PF08019 Phosphoethanolamine transferase EptA/EptB AYJ52_01015 PF00884 Sulfatase AYJ52_01040 PF01734 Patatin-like phospholipase AYJ52_01050 PF01145 SPFH domain / Band 7 family AYJ52_01055 PF04237 YjbR AYJ52_01060 PF00348 Polyprenyl synthetase AYJ52_01065 PF04303 PrpF protein AYJ52_01070 PF00324 Amino acid permease AYJ52_01075 PF00293 NUDIX domain AYJ52_01075 PF09297 NADH pyrophosphatase zinc ribbon domain AYJ52_01080 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AYJ52_01095 PF13356 Arm DNA-binding domain AYJ52_01095 PF00589 Phage integrase family AYJ52_01130 PF03796 DnaB-like helicase C terminal domain AYJ52_01130 PF00772 DnaB-like helicase N terminal domain AYJ52_01180 PF00004 ATPase family associated with various cellular activities (AAA) AYJ52_01190 PF01965 DJ-1/PfpI family AYJ52_01195 PF00698 Acyl transferase domain AYJ52_01195 PF00109 Beta-ketoacyl synthase, N-terminal domain AYJ52_01195 PF08240 Alcohol dehydrogenase GroES-like domain AYJ52_01195 PF08659 KR domain AYJ52_01195 PF00550 Phosphopantetheine attachment site AYJ52_01195 PF16197 Ketoacyl-synthetase C-terminal extension AYJ52_01195 PF14765 Polyketide synthase dehydratase AYJ52_01195 PF08990 Erythronolide synthase docking AYJ52_01195 PF02801 Beta-ketoacyl synthase, C-terminal domain AYJ52_01195 PF09277 Erythronolide synthase, docking AYJ52_01200 PF06719 AraC-type transcriptional regulator N-terminus AYJ52_01200 PF12833 Helix-turn-helix domain AYJ52_01205 PF02673 Bacitracin resistance protein BacA AYJ52_01225 PF02525 Flavodoxin-like fold AYJ52_01240 PF01507 Phosphoadenosine phosphosulfate reductase family AYJ52_01245 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AYJ52_01245 PF06974 Protein of unknown function (DUF1298) AYJ52_01250 PF10150 Ribonuclease E/G family AYJ52_01250 PF00575 S1 RNA binding domain AYJ52_01255 PF02545 Maf-like protein AYJ52_01260 PF04093 rod shape-determining protein MreD AYJ52_01265 PF04085 rod shape-determining protein MreC AYJ52_01275 PF02686 Glu-tRNAGln amidotransferase C subunit AYJ52_01280 PF01425 Amidase AYJ52_01285 PF02637 GatB domain AYJ52_01285 PF02934 GatB/GatE catalytic domain AYJ52_01290 PF13276 HTH-like domain AYJ52_01290 PF00665 Integrase core domain AYJ52_01290 PF13333 Integrase core domain AYJ52_01320 PF13340 Putative transposase of IS4/5 family (DUF4096) AYJ52_01330 PF01431 Peptidase family M13 AYJ52_01330 PF05649 Peptidase family M13 AYJ52_01335 PF05992 SbmA/BacA-like family AYJ52_01340 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_01340 PF13291 ACT domain AYJ52_01345 PF01734 Patatin-like phospholipase AYJ52_01350 PF01235 Sodium:alanine symporter family AYJ52_01360 PF00881 Nitroreductase family AYJ52_01365 PF07690 Major Facilitator Superfamily AYJ52_01370 PF12805 FUSC-like inner membrane protein yccS AYJ52_01380 PF00258 Flavodoxin AYJ52_01380 PF00667 FAD binding domain AYJ52_01380 PF00175 Oxidoreductase NAD-binding domain AYJ52_01420 PF03734 L,D-transpeptidase catalytic domain AYJ52_01420 PF17969 L,D-transpeptidase C-terminal domain AYJ52_01425 PF04304 Protein of unknown function (DUF454) AYJ52_01435 PF08085 Entericidin EcnA/B family AYJ52_01440 PF01546 Peptidase family M20/M25/M40 AYJ52_01440 PF07687 Peptidase dimerisation domain AYJ52_01455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_01455 PF01627 Hpt domain AYJ52_01455 PF01584 CheW-like domain AYJ52_01455 PF00072 Response regulator receiver domain AYJ52_01465 PF13340 Putative transposase of IS4/5 family (DUF4096) AYJ52_01475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ52_01475 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AYJ52_01480 PF01584 CheW-like domain AYJ52_01485 PF00072 Response regulator receiver domain AYJ52_01490 PF00072 Response regulator receiver domain AYJ52_01505 PF00873 AcrB/AcrD/AcrF family AYJ52_01510 PF03129 Anticodon binding domain AYJ52_01510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYJ52_01510 PF04073 Aminoacyl-tRNA editing domain AYJ52_01515 PF07411 Domain of unknown function (DUF1508) AYJ52_01520 PF03831 PhnA domain AYJ52_01520 PF08274 PhnA Zinc-Ribbon AYJ52_01525 PF04343 Protein of unknown function, DUF488 AYJ52_01530 PF12697 Alpha/beta hydrolase family AYJ52_01535 PF00881 Nitroreductase family AYJ52_01540 PF00296 Luciferase-like monooxygenase AYJ52_01545 PF00857 Isochorismatase family AYJ52_01550 PF01042 Endoribonuclease L-PSP AYJ52_01555 PF01613 Flavin reductase like domain AYJ52_01560 PF00860 Permease family AYJ52_01565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYJ52_01565 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYJ52_01575 PF01571 Aminomethyltransferase folate-binding domain AYJ52_01580 PF13098 Thioredoxin-like domain AYJ52_01580 PF10411 Disulfide bond isomerase protein N-terminus AYJ52_01590 PF03547 Membrane transport protein AYJ52_01595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYJ52_01600 PF00593 TonB dependent receptor AYJ52_01600 PF07715 TonB-dependent Receptor Plug Domain AYJ52_01605 PF02245 Methylpurine-DNA glycosylase (MPG) AYJ52_01610 PF06827 Zinc finger found in FPG and IleRS AYJ52_01610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AYJ52_01610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AYJ52_01620 PF02264 LamB porin AYJ52_01630 PF01741 Large-conductance mechanosensitive channel, MscL AYJ52_01640 PF00860 Permease family AYJ52_01645 PF08468 Methyltransferase small domain N-terminal AYJ52_01645 PF05175 Methyltransferase small domain AYJ52_01650 PF00324 Amino acid permease AYJ52_01655 PF01139 tRNA-splicing ligase RtcB AYJ52_01660 PF13505 Outer membrane protein beta-barrel domain AYJ52_01660 PF00691 OmpA family AYJ52_01665 PF07963 Prokaryotic N-terminal methylation motif AYJ52_01665 PF00114 Pilin (bacterial filament) AYJ52_01670 PF02803 Thiolase, C-terminal domain AYJ52_01670 PF00108 Thiolase, N-terminal domain AYJ52_01680 PF00893 Small Multidrug Resistance protein AYJ52_01690 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AYJ52_01690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AYJ52_01695 PF01011 PQQ enzyme repeat AYJ52_01700 PF04966 Carbohydrate-selective porin, OprB family AYJ52_01705 PF02515 CoA-transferase family III AYJ52_01710 PF12833 Helix-turn-helix domain AYJ52_01710 PF02311 AraC-like ligand binding domain AYJ52_01715 PF00108 Thiolase, N-terminal domain AYJ52_01715 PF02803 Thiolase, C-terminal domain AYJ52_01720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYJ52_01720 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_01720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYJ52_01735 PF13673 Acetyltransferase (GNAT) domain AYJ52_01745 PF03006 Haemolysin-III related AYJ52_01750 PF07690 Major Facilitator Superfamily AYJ52_01750 PF00083 Sugar (and other) transporter AYJ52_01760 PF02810 SEC-C motif AYJ52_01760 PF07517 SecA DEAD-like domain AYJ52_01760 PF07516 SecA Wing and Scaffold domain AYJ52_01760 PF01043 SecA preprotein cross-linking domain AYJ52_01765 PF10417 C-terminal domain of 1-Cys peroxiredoxin AYJ52_01765 PF00578 AhpC/TSA family AYJ52_01770 PF00753 Metallo-beta-lactamase superfamily AYJ52_01785 PF08245 Mur ligase middle domain AYJ52_01785 PF02875 Mur ligase family, glutamate ligase domain AYJ52_01790 PF01039 Carboxyl transferase domain AYJ52_01795 PF00290 Tryptophan synthase alpha chain AYJ52_01820 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_01825 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AYJ52_01830 PF07715 TonB-dependent Receptor Plug Domain AYJ52_01830 PF00593 TonB dependent receptor AYJ52_01835 PF01923 Cobalamin adenosyltransferase AYJ52_01840 PF03009 Glycerophosphoryl diester phosphodiesterase family AYJ52_01855 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AYJ52_01865 PF00486 Transcriptional regulatory protein, C terminal AYJ52_01865 PF00072 Response regulator receiver domain AYJ52_01870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_01870 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_01870 PF00672 HAMP domain AYJ52_01880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_01880 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_01880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_01880 PF12806 Acetyl-CoA dehydrogenase C-terminal like AYJ52_01885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_01885 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_01885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_01885 PF12806 Acetyl-CoA dehydrogenase C-terminal like AYJ52_01890 PF06146 Phosphate-starvation-inducible E AYJ52_01910 PF00593 TonB dependent receptor AYJ52_01910 PF07715 TonB-dependent Receptor Plug Domain AYJ52_01920 PF01336 OB-fold nucleic acid binding domain AYJ52_01920 PF00152 tRNA synthetases class II (D, K and N) AYJ52_01920 PF02938 GAD domain AYJ52_01935 PF08437 Glycosyl transferase family 8 C-terminal AYJ52_01935 PF01501 Glycosyl transferase family 8 AYJ52_01940 PF09612 Bacterial protein of unknown function (HtrL_YibB) AYJ52_01950 PF13936 Helix-turn-helix domain AYJ52_01950 PF00665 Integrase core domain AYJ52_01960 PF13439 Glycosyltransferase Family 4 AYJ52_01960 PF00534 Glycosyl transferases group 1 AYJ52_01970 PF00534 Glycosyl transferases group 1 AYJ52_01970 PF13439 Glycosyltransferase Family 4 AYJ52_01975 PF01522 Polysaccharide deacetylase AYJ52_01985 PF01063 Amino-transferase class IV AYJ52_01990 PF08335 GlnD PII-uridylyltransferase AYJ52_01990 PF03710 Glutamate-ammonia ligase adenylyltransferase AYJ52_01995 PF01627 Hpt domain AYJ52_01995 PF00072 Response regulator receiver domain AYJ52_01995 PF00672 HAMP domain AYJ52_01995 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_01995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AYJ52_01995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_02005 PF02547 Queuosine biosynthesis protein AYJ52_02025 PF01702 Queuine tRNA-ribosyltransferase AYJ52_02030 PF02699 Preprotein translocase subunit AYJ52_02035 PF13721 SecD export protein N-terminal TM region AYJ52_02035 PF02355 Protein export membrane protein AYJ52_02035 PF07549 SecD/SecF GG Motif AYJ52_02040 PF07549 SecD/SecF GG Motif AYJ52_02040 PF02355 Protein export membrane protein AYJ52_02045 PF04127 DNA / pantothenate metabolism flavoprotein AYJ52_02045 PF02441 Flavoprotein AYJ52_02050 PF04002 RadC-like JAB domain AYJ52_02055 PF01062 Bestrophin, RFP-TM, chloride channel AYJ52_02065 PF04279 Intracellular septation protein A AYJ52_02070 PF03795 YCII-related domain AYJ52_02080 PF01266 FAD dependent oxidoreductase AYJ52_02080 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_02090 PF04461 Protein of unknown function (DUF520) AYJ52_02105 PF03061 Thioesterase superfamily AYJ52_02110 PF00085 Thioredoxin AYJ52_02115 PF00561 alpha/beta hydrolase fold AYJ52_02120 PF04273 Putative phosphatase (DUF442) AYJ52_02120 PF00753 Metallo-beta-lactamase superfamily AYJ52_02130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYJ52_02130 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_02130 PF00403 Heavy-metal-associated domain AYJ52_02165 PF13689 YfiR/HmsC-like AYJ52_02170 PF00990 Diguanylate cyclase, GGDEF domain AYJ52_02170 PF17152 Periplasmic sensor domain AYJ52_02175 PF01389 OmpA-like transmembrane domain AYJ52_02175 PF00691 OmpA family AYJ52_02180 PF00149 Calcineurin-like phosphoesterase AYJ52_02180 PF10518 TAT (twin-arginine translocation) pathway signal sequence AYJ52_02190 PF13091 PLD-like domain AYJ52_02200 PF16360 GTP-binding GTPase Middle Region AYJ52_02200 PF13167 GTP-binding GTPase N-terminal AYJ52_02200 PF01926 50S ribosome-binding GTPase AYJ52_02220 PF00149 Calcineurin-like phosphoesterase AYJ52_02225 PF00398 Ribosomal RNA adenine dimethylase AYJ52_02230 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AYJ52_02235 PF00572 Ribosomal protein L13 AYJ52_02240 PF00380 Ribosomal protein S9/S16 AYJ52_02245 PF13417 Glutathione S-transferase, N-terminal domain AYJ52_02245 PF00043 Glutathione S-transferase, C-terminal domain AYJ52_02250 PF04386 Stringent starvation protein B AYJ52_02285 PF13276 HTH-like domain AYJ52_02285 PF00665 Integrase core domain AYJ52_02285 PF13333 Integrase core domain AYJ52_02290 PF01527 Transposase AYJ52_02305 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_02305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_02305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_02310 PF01039 Carboxyl transferase domain AYJ52_02325 PF17932 Tetracyclin repressor-like, C-terminal domain AYJ52_02325 PF00440 Bacterial regulatory proteins, tetR family AYJ52_02330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_02330 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_02330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_02375 PF01066 CDP-alcohol phosphatidyltransferase AYJ52_02380 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AYJ52_02400 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AYJ52_02400 PF00056 lactate/malate dehydrogenase, NAD binding domain AYJ52_02410 PF01551 Peptidase family M23 AYJ52_02410 PF10145 Phage-related minor tail protein AYJ52_02410 PF01464 Transglycosylase SLT domain AYJ52_02415 PF00919 Uncharacterized protein family UPF0004 AYJ52_02415 PF01938 TRAM domain AYJ52_02415 PF04055 Radical SAM superfamily AYJ52_02420 PF02562 PhoH-like protein AYJ52_02425 PF02130 Uncharacterized protein family UPF0054 AYJ52_02450 PF03358 NADPH-dependent FMN reductase AYJ52_02455 PF03631 Virulence factor BrkB AYJ52_02505 PF17876 Cold shock domain AYJ52_02505 PF08206 Ribonuclease B OB domain AYJ52_02505 PF00575 S1 RNA binding domain AYJ52_02505 PF00773 RNB domain AYJ52_02505 PF08461 Ribonuclease R winged-helix domain AYJ52_02510 PF01432 Peptidase family M3 AYJ52_02515 PF09526 Probable metal-binding protein (DUF2387) AYJ52_02545 PF03937 Flavinator of succinate dehydrogenase AYJ52_02550 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_02550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_02550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_02555 PF00743 Flavin-binding monooxygenase-like AYJ52_02560 PF01196 Ribosomal protein L17 AYJ52_02565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AYJ52_02565 PF01000 RNA polymerase Rpb3/RpoA insert domain AYJ52_02565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AYJ52_02570 PF00163 Ribosomal protein S4/S9 N-terminal domain AYJ52_02570 PF01479 S4 domain AYJ52_02575 PF00411 Ribosomal protein S11 AYJ52_02580 PF00416 Ribosomal protein S13/S18 AYJ52_02585 PF00444 Ribosomal protein L36 AYJ52_02590 PF00344 SecY translocase AYJ52_02595 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AYJ52_02600 PF00327 Ribosomal protein L30p/L7e AYJ52_02605 PF03719 Ribosomal protein S5, C-terminal domain AYJ52_02605 PF00333 Ribosomal protein S5, N-terminal domain AYJ52_02610 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AYJ52_02615 PF00347 Ribosomal protein L6 AYJ52_02620 PF00410 Ribosomal protein S8 AYJ52_02625 PF00253 Ribosomal protein S14p/S29e AYJ52_02630 PF00673 ribosomal L5P family C-terminus AYJ52_02630 PF00281 Ribosomal protein L5 AYJ52_02635 PF00467 KOW motif AYJ52_02635 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AYJ52_02640 PF00238 Ribosomal protein L14p/L23e AYJ52_02645 PF00366 Ribosomal protein S17 AYJ52_02650 PF00831 Ribosomal L29 protein AYJ52_02655 PF00252 Ribosomal protein L16p/L10e AYJ52_02660 PF07650 KH domain AYJ52_02660 PF00189 Ribosomal protein S3, C-terminal domain AYJ52_02665 PF00237 Ribosomal protein L22p/L17e AYJ52_02670 PF00203 Ribosomal protein S19 AYJ52_02675 PF00181 Ribosomal Proteins L2, RNA binding domain AYJ52_02675 PF03947 Ribosomal Proteins L2, C-terminal domain AYJ52_02680 PF00276 Ribosomal protein L23 AYJ52_02685 PF00573 Ribosomal protein L4/L1 family AYJ52_02690 PF00297 Ribosomal protein L3 AYJ52_02695 PF00338 Ribosomal protein S10p/S20e AYJ52_02700 PF00117 Glutamine amidotransferase class-I AYJ52_02705 PF01053 Cys/Met metabolism PLP-dependent enzyme AYJ52_02710 PF05872 Bacterial protein of unknown function (DUF853) AYJ52_02715 PF00042 Globin AYJ52_02715 PF00970 Oxidoreductase FAD-binding domain AYJ52_02715 PF00175 Oxidoreductase NAD-binding domain AYJ52_02720 PF02082 Transcriptional regulator AYJ52_02725 PF01926 50S ribosome-binding GTPase AYJ52_02735 PF00375 Sodium:dicarboxylate symporter family AYJ52_02745 PF01553 Acyltransferase AYJ52_02760 PF17191 RecG wedge domain AYJ52_02760 PF00271 Helicase conserved C-terminal domain AYJ52_02760 PF00270 DEAD/DEAH box helicase AYJ52_02765 PF00156 Phosphoribosyl transferase domain AYJ52_02775 PF03641 Possible lysine decarboxylase AYJ52_02780 PF01544 CorA-like Mg2+ transporter protein AYJ52_02790 PF05494 MlaC protein AYJ52_02800 PF02405 Permease MlaE AYJ52_02805 PF00005 ABC transporter AYJ52_02815 PF00271 Helicase conserved C-terminal domain AYJ52_02815 PF00270 DEAD/DEAH box helicase AYJ52_02815 PF12343 Cold shock protein DEAD box A AYJ52_02815 PF03880 DbpA RNA binding domain AYJ52_02820 PF00459 Inositol monophosphatase family AYJ52_02825 PF02780 Transketolase, C-terminal domain AYJ52_02825 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AYJ52_02825 PF02779 Transketolase, pyrimidine binding domain AYJ52_02830 PF00925 GTP cyclohydrolase II AYJ52_02835 PF01218 Coproporphyrinogen III oxidase AYJ52_02840 PF08501 Shikimate dehydrogenase substrate binding domain AYJ52_02840 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AYJ52_02840 PF01488 Shikimate / quinate 5-dehydrogenase AYJ52_02850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_02850 PF12806 Acetyl-CoA dehydrogenase C-terminal like AYJ52_02850 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_02850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_02860 PF04024 PspC domain AYJ52_02865 PF00571 CBS domain AYJ52_02865 PF07085 DRTGG domain AYJ52_02865 PF00392 Bacterial regulatory proteins, gntR family AYJ52_02865 PF03061 Thioesterase superfamily AYJ52_02895 PF02091 Glycyl-tRNA synthetase alpha subunit AYJ52_02900 PF05746 DALR anticodon binding domain AYJ52_02900 PF02092 Glycyl-tRNA synthetase beta subunit AYJ52_02910 PF00892 EamA-like transporter family AYJ52_02915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_02915 PF03466 LysR substrate binding domain AYJ52_02945 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AYJ52_02950 PF04996 Succinylarginine dihydrolase AYJ52_02955 PF00171 Aldehyde dehydrogenase family AYJ52_02960 PF04958 Arginine N-succinyltransferase beta subunit AYJ52_02965 PF00202 Aminotransferase class-III AYJ52_02970 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYJ52_02970 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AYJ52_02975 PF00324 Amino acid permease AYJ52_02985 PF08241 Methyltransferase domain AYJ52_03005 PF13614 AAA domain AYJ52_03010 PF01594 AI-2E family transporter AYJ52_03015 PF00080 Copper/zinc superoxide dismutase (SODC) AYJ52_03020 PF12805 FUSC-like inner membrane protein yccS AYJ52_03025 PF07690 Major Facilitator Superfamily AYJ52_03035 PF02525 Flavodoxin-like fold AYJ52_03040 PF03992 Antibiotic biosynthesis monooxygenase AYJ52_03050 PF02913 FAD linked oxidases, C-terminal domain AYJ52_03050 PF01565 FAD binding domain AYJ52_03055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYJ52_03055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYJ52_03060 PF00892 EamA-like transporter family AYJ52_03065 PF00892 EamA-like transporter family AYJ52_03075 PF01925 Sulfite exporter TauE/SafE AYJ52_03080 PF01509 TruB family pseudouridylate synthase (N terminal domain) AYJ52_03080 PF16198 tRNA pseudouridylate synthase B C-terminal domain AYJ52_03080 PF09157 Pseudouridine synthase II TruB, C-terminal AYJ52_03085 PF03280 Proteobacterial lipase chaperone protein AYJ52_03090 PF00561 alpha/beta hydrolase fold AYJ52_03095 PF01245 Ribosomal protein L19 AYJ52_03100 PF01746 tRNA (Guanine-1)-methyltransferase AYJ52_03105 PF05239 PRC-barrel domain AYJ52_03105 PF01782 RimM N-terminal domain AYJ52_03110 PF00886 Ribosomal protein S16 AYJ52_03150 PF02401 LytB protein AYJ52_03155 PF00625 Guanylate kinase AYJ52_03160 PF01192 RNA polymerase Rpb6 AYJ52_03165 PF02824 TGS domain AYJ52_03165 PF13291 ACT domain AYJ52_03165 PF04607 Region found in RelA / SpoT proteins AYJ52_03170 PF01042 Endoribonuclease L-PSP AYJ52_03175 PF04324 BFD-like [2Fe-2S] binding domain AYJ52_03180 PF00210 Ferritin-like domain AYJ52_03185 PF11846 Virulence factor membrane-bound polymerase, C-terminal AYJ52_03185 PF04932 O-Antigen ligase AYJ52_03185 PF15864 Protein glycosylation ligase AYJ52_03195 PF00114 Pilin (bacterial filament) AYJ52_03195 PF07963 Prokaryotic N-terminal methylation motif AYJ52_03205 PF04536 TPM domain AYJ52_03210 PF04011 LemA family AYJ52_03220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AYJ52_03220 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_03225 PF01493 GXGXG motif AYJ52_03225 PF01645 Conserved region in glutamate synthase AYJ52_03225 PF04898 Glutamate synthase central domain AYJ52_03225 PF00310 Glutamine amidotransferases class-II AYJ52_03235 PF01761 3-dehydroquinate synthase AYJ52_03240 PF01202 Shikimate kinase AYJ52_03245 PF07660 Secretin and TonB N terminus short domain AYJ52_03245 PF11741 AMIN domain AYJ52_03245 PF00263 Bacterial type II and III secretion system protein AYJ52_03245 PF03958 Bacterial type II/III secretion system short domain AYJ52_03270 PF00912 Transglycosylase AYJ52_03270 PF17092 Penicillin-binding protein OB-like domain AYJ52_03270 PF00905 Penicillin binding protein transpeptidase domain AYJ52_03275 PF13847 Methyltransferase domain AYJ52_03285 PF00953 Glycosyl transferase family 4 AYJ52_03290 PF08245 Mur ligase middle domain AYJ52_03290 PF01225 Mur ligase family, catalytic domain AYJ52_03290 PF02875 Mur ligase family, glutamate ligase domain AYJ52_03295 PF02875 Mur ligase family, glutamate ligase domain AYJ52_03295 PF08245 Mur ligase middle domain AYJ52_03295 PF01225 Mur ligase family, catalytic domain AYJ52_03300 PF00905 Penicillin binding protein transpeptidase domain AYJ52_03300 PF03717 Penicillin-binding Protein dimerisation domain AYJ52_03310 PF01795 MraW methylase family AYJ52_03325 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYJ52_03340 PF00324 Amino acid permease AYJ52_03370 PF01545 Cation efflux family AYJ52_03375 PF00873 AcrB/AcrD/AcrF family AYJ52_03380 PF00529 HlyD membrane-fusion protein of T1SS AYJ52_03380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYJ52_03395 PF04191 Phospholipid methyltransferase AYJ52_03420 PF12848 ABC transporter AYJ52_03420 PF00005 ABC transporter AYJ52_03425 PF01053 Cys/Met metabolism PLP-dependent enzyme AYJ52_03430 PF12833 Helix-turn-helix domain AYJ52_03435 PF12823 Domain of unknown function (DUF3817) AYJ52_03445 PF00106 short chain dehydrogenase AYJ52_03450 PF00916 Sulfate permease family AYJ52_03450 PF01740 STAS domain AYJ52_03455 PF00575 S1 RNA binding domain AYJ52_03455 PF17674 HHH domain AYJ52_03455 PF16921 Tex protein YqgF-like domain AYJ52_03455 PF09371 Tex-like protein N-terminal domain AYJ52_03460 PF00072 Response regulator receiver domain AYJ52_03460 PF00486 Transcriptional regulatory protein, C terminal AYJ52_03465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_03465 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_03465 PF00672 HAMP domain AYJ52_03470 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AYJ52_03470 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AYJ52_03475 PF00583 Acetyltransferase (GNAT) family AYJ52_03480 PF13276 HTH-like domain AYJ52_03480 PF00665 Integrase core domain AYJ52_03480 PF13333 Integrase core domain AYJ52_03485 PF01527 Transposase AYJ52_03505 PF00475 Imidazoleglycerol-phosphate dehydratase AYJ52_03510 PF00117 Glutamine amidotransferase class-I AYJ52_03525 PF00977 Histidine biosynthesis protein AYJ52_03530 PF00005 ABC transporter AYJ52_03530 PF00664 ABC transporter transmembrane region AYJ52_03555 PF01636 Phosphotransferase enzyme family AYJ52_03560 PF00977 Histidine biosynthesis protein AYJ52_03575 PF00230 Major intrinsic protein AYJ52_03600 PF02705 K+ potassium transporter AYJ52_03610 PF13356 Arm DNA-binding domain AYJ52_03610 PF00589 Phage integrase family AYJ52_03650 PF01381 Helix-turn-helix AYJ52_03660 PF07669 Eco57I restriction-modification methylase AYJ52_03670 PF01527 Transposase AYJ52_03675 PF13333 Integrase core domain AYJ52_03675 PF00665 Integrase core domain AYJ52_03675 PF13276 HTH-like domain AYJ52_03685 PF13333 Integrase core domain AYJ52_03685 PF00665 Integrase core domain AYJ52_03685 PF13276 HTH-like domain AYJ52_03690 PF12833 Helix-turn-helix domain AYJ52_03690 PF02311 AraC-like ligand binding domain AYJ52_03695 PF00248 Aldo/keto reductase family AYJ52_03715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_03715 PF03466 LysR substrate binding domain AYJ52_03720 PF07690 Major Facilitator Superfamily AYJ52_03760 PF13333 Integrase core domain AYJ52_03760 PF13276 HTH-like domain AYJ52_03760 PF00665 Integrase core domain AYJ52_03765 PF01527 Transposase AYJ52_03810 PF13333 Integrase core domain AYJ52_03810 PF00665 Integrase core domain AYJ52_03810 PF13276 HTH-like domain AYJ52_03815 PF01527 Transposase AYJ52_03835 PF01593 Flavin containing amine oxidoreductase AYJ52_03840 PF05726 Pirin C-terminal cupin domain AYJ52_03840 PF02678 Pirin AYJ52_03845 PF00857 Isochorismatase family AYJ52_03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_03855 PF00171 Aldehyde dehydrogenase family AYJ52_03860 PF00202 Aminotransferase class-III AYJ52_03865 PF00392 Bacterial regulatory proteins, gntR family AYJ52_03865 PF00155 Aminotransferase class I and II AYJ52_03870 PF00324 Amino acid permease AYJ52_03880 PF03591 AzlC protein AYJ52_03890 PF00436 Single-strand binding protein family AYJ52_03895 PF07690 Major Facilitator Superfamily AYJ52_03905 PF08543 Phosphomethylpyrimidine kinase AYJ52_03905 PF03070 TENA/THI-4/PQQC family AYJ52_03905 PF02581 Thiamine monophosphate synthase AYJ52_03910 PF09278 MerR, DNA binding AYJ52_03910 PF00376 MerR family regulatory protein AYJ52_03915 PF00106 short chain dehydrogenase AYJ52_03920 PF06942 GlpM protein AYJ52_03930 PF08240 Alcohol dehydrogenase GroES-like domain AYJ52_03930 PF00107 Zinc-binding dehydrogenase AYJ52_03935 PF00440 Bacterial regulatory proteins, tetR family AYJ52_03935 PF16925 Tetracyclin repressor-like, C-terminal domain AYJ52_03940 PF17755 UvrA DNA-binding domain AYJ52_03940 PF17760 UvrA interaction domain AYJ52_03945 PF00990 Diguanylate cyclase, GGDEF domain AYJ52_03945 PF17158 Membrane-associated sensor, integral membrane domain AYJ52_03955 PF02028 BCCT, betaine/carnitine/choline family transporter AYJ52_03965 PF00474 Sodium:solute symporter family AYJ52_03970 PF04341 Protein of unknown function, DUF485 AYJ52_03975 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_03975 PF00672 HAMP domain AYJ52_03975 PF01627 Hpt domain AYJ52_03975 PF00072 Response regulator receiver domain AYJ52_03975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_03985 PF00196 Bacterial regulatory proteins, luxR family AYJ52_03985 PF00072 Response regulator receiver domain AYJ52_03990 PF03358 NADPH-dependent FMN reductase AYJ52_03995 PF00296 Luciferase-like monooxygenase AYJ52_04000 PF01037 Lrp/AsnC ligand binding domain AYJ52_04005 PF00857 Isochorismatase family AYJ52_04010 PF16177 Acetyl-coenzyme A synthetase N-terminus AYJ52_04010 PF00501 AMP-binding enzyme AYJ52_04010 PF13193 AMP-binding enzyme C-terminal domain AYJ52_04020 PF05552 Conserved TM helix AYJ52_04020 PF00924 Mechanosensitive ion channel AYJ52_04025 PF04452 RNA methyltransferase AYJ52_04030 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AYJ52_04035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYJ52_04045 PF00472 RF-1 domain AYJ52_04045 PF03462 PCRF domain AYJ52_04055 PF01368 DHH family AYJ52_04055 PF02272 DHHA1 domain AYJ52_04055 PF17768 RecJ OB domain AYJ52_04060 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AYJ52_04060 PF01243 Pyridoxamine 5'-phosphate oxidase AYJ52_04065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYJ52_04065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYJ52_04065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYJ52_04065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYJ52_04070 PF00478 IMP dehydrogenase / GMP reductase domain AYJ52_04070 PF00571 CBS domain AYJ52_04075 PF01613 Flavin reductase like domain AYJ52_04075 PF00258 Flavodoxin AYJ52_04080 PF00593 TonB dependent receptor AYJ52_04080 PF07715 TonB-dependent Receptor Plug Domain AYJ52_04085 PF01169 Uncharacterized protein family UPF0016 AYJ52_04095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYJ52_04095 PF02817 e3 binding domain AYJ52_04095 PF00364 Biotin-requiring enzyme AYJ52_04100 PF17831 Pyruvate dehydrogenase E1 component middle domain AYJ52_04100 PF00456 Transketolase, thiamine diphosphate binding domain AYJ52_04105 PF01551 Peptidase family M23 AYJ52_04115 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AYJ52_04120 PF12327 FtsZ family, C-terminal domain AYJ52_04120 PF00091 Tubulin/FtsZ family, GTPase domain AYJ52_04125 PF02491 SHS2 domain inserted in FTSA AYJ52_04130 PF03799 Cell division protein FtsQ AYJ52_04130 PF08478 POTRA domain, FtsQ-type AYJ52_04135 PF01820 D-ala D-ala ligase N-terminus AYJ52_04135 PF07478 D-ala D-ala ligase C-terminus AYJ52_04140 PF02875 Mur ligase family, glutamate ligase domain AYJ52_04140 PF01225 Mur ligase family, catalytic domain AYJ52_04140 PF08245 Mur ligase middle domain AYJ52_04145 PF04101 Glycosyltransferase family 28 C-terminal domain AYJ52_04145 PF03033 Glycosyltransferase family 28 N-terminal domain AYJ52_04150 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AYJ52_04150 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AYJ52_04160 PF07715 TonB-dependent Receptor Plug Domain AYJ52_04160 PF00593 TonB dependent receptor AYJ52_04170 PF00156 Phosphoribosyl transferase domain AYJ52_04175 PF03372 Endonuclease/Exonuclease/phosphatase family AYJ52_04180 PF03960 ArsC family AYJ52_04190 PF07859 alpha/beta hydrolase fold AYJ52_04195 PF07694 5TMR of 5TMR-LYT AYJ52_04195 PF00990 Diguanylate cyclase, GGDEF domain AYJ52_04200 PF11412 Disulphide bond corrector protein DsbC AYJ52_04200 PF02683 Cytochrome C biogenesis protein transmembrane region AYJ52_04230 PF00576 HIUase/Transthyretin family AYJ52_04235 PF00860 Permease family AYJ52_04245 PF01494 FAD binding domain AYJ52_04250 PF03561 Allantoicase repeat AYJ52_04255 PF04115 Ureidoglycolate lyase AYJ52_04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_04260 PF00986 DNA gyrase B subunit, carboxyl terminus AYJ52_04260 PF00204 DNA gyrase B AYJ52_04260 PF01751 Toprim domain AYJ52_04265 PF05728 Uncharacterised protein family (UPF0227) AYJ52_04275 PF13936 Helix-turn-helix domain AYJ52_04275 PF00665 Integrase core domain AYJ52_04310 PF00665 Integrase core domain AYJ52_04310 PF13936 Helix-turn-helix domain AYJ52_04315 PF04717 Type VI secretion system, phage-baseplate injector AYJ52_04320 PF02600 Disulfide bond formation protein DsbB AYJ52_04325 PF04262 Glutamate-cysteine ligase AYJ52_04340 PF04286 Protein of unknown function (DUF445) AYJ52_04345 PF00155 Aminotransferase class I and II AYJ52_04350 PF01554 MatE AYJ52_04355 PF00106 short chain dehydrogenase AYJ52_04365 PF00072 Response regulator receiver domain AYJ52_04365 PF00486 Transcriptional regulatory protein, C terminal AYJ52_04370 PF00989 PAS fold AYJ52_04370 PF11808 Phosphate regulon sensor protein PhoR AYJ52_04370 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_04380 PF01547 Bacterial extracellular solute-binding protein AYJ52_04390 PF03069 Acetamidase/Formamidase family AYJ52_04395 PF02666 Phosphatidylserine decarboxylase AYJ52_04400 PF00581 Rhodanese-like domain AYJ52_04405 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AYJ52_04405 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AYJ52_04410 PF02580 D-Tyr-tRNA(Tyr) deacylase AYJ52_04440 PF00925 GTP cyclohydrolase II AYJ52_04440 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AYJ52_04445 PF00885 6,7-dimethyl-8-ribityllumazine synthase AYJ52_04450 PF01029 NusB family AYJ52_04455 PF00586 AIR synthase related protein, N-terminal domain AYJ52_04455 PF02769 AIR synthase related protein, C-terminal domain AYJ52_04460 PF04608 Phosphatidylglycerophosphatase A AYJ52_04465 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_04465 PF14602 Hexapeptide repeat of succinyl-transferase AYJ52_04465 PF12804 MobA-like NTP transferase domain AYJ52_04470 PF01380 SIS domain AYJ52_04510 PF01810 LysE type translocator AYJ52_04515 PF01177 Asp/Glu/Hydantoin racemase AYJ52_04520 PF13419 Haloacid dehalogenase-like hydrolase AYJ52_04530 PF00491 Arginase family AYJ52_04535 PF01979 Amidohydrolase family AYJ52_04540 PF00324 Amino acid permease AYJ52_04545 PF00221 Aromatic amino acid lyase AYJ52_04550 PF17391 Urocanase N-terminal domain AYJ52_04550 PF17392 Urocanase C-terminal domain AYJ52_04550 PF01175 Urocanase Rossmann-like domain AYJ52_04555 PF05962 HutD AYJ52_04560 PF07702 UTRA domain AYJ52_04560 PF00392 Bacterial regulatory proteins, gntR family AYJ52_04570 PF07683 Cobalamin synthesis protein cobW C-terminal domain AYJ52_04570 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYJ52_04580 PF00324 Amino acid permease AYJ52_04590 PF02798 Glutathione S-transferase, N-terminal domain AYJ52_04590 PF14497 Glutathione S-transferase, C-terminal domain AYJ52_04595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYJ52_04605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYJ52_04610 PF04463 Protein of unknown function (DUF523) AYJ52_04620 PF01758 Sodium Bile acid symporter family AYJ52_04625 PF00857 Isochorismatase family AYJ52_04630 PF00701 Dihydrodipicolinate synthetase family AYJ52_04640 PF01259 SAICAR synthetase AYJ52_04650 PF01226 Formate/nitrite transporter AYJ52_04655 PF00004 ATPase family associated with various cellular activities (AAA) AYJ52_04655 PF16193 AAA C-terminal domain AYJ52_04655 PF12002 MgsA AAA+ ATPase C terminal AYJ52_04660 PF07995 Glucose / Sorbosone dehydrogenase AYJ52_04665 PF03692 Putative zinc- or iron-chelating domain AYJ52_04680 PF14815 NUDIX domain AYJ52_04680 PF00730 HhH-GPD superfamily base excision DNA repair protein AYJ52_04680 PF00633 Helix-hairpin-helix motif AYJ52_04680 PF10576 Iron-sulfur binding domain of endonuclease III AYJ52_04695 PF03352 Methyladenine glycosylase AYJ52_04700 PF08240 Alcohol dehydrogenase GroES-like domain AYJ52_04700 PF00107 Zinc-binding dehydrogenase AYJ52_04705 PF00155 Aminotransferase class I and II AYJ52_04705 PF00392 Bacterial regulatory proteins, gntR family AYJ52_04715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_04715 PF03466 LysR substrate binding domain AYJ52_04720 PF00248 Aldo/keto reductase family AYJ52_04725 PF07690 Major Facilitator Superfamily AYJ52_04735 PF01113 Dihydrodipicolinate reductase, N-terminus AYJ52_04735 PF05173 Dihydrodipicolinate reductase, C-terminus AYJ52_04745 PF00226 DnaJ domain AYJ52_04745 PF01556 DnaJ C terminal domain AYJ52_04745 PF00684 DnaJ central domain AYJ52_04755 PF00873 AcrB/AcrD/AcrF family AYJ52_04760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYJ52_04765 PF08361 MAATS-type transcriptional repressor, C-terminal region AYJ52_04765 PF00440 Bacterial regulatory proteins, tetR family AYJ52_04770 PF00311 Phosphoenolpyruvate carboxylase AYJ52_04775 PF00860 Permease family AYJ52_04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_04780 PF03466 LysR substrate binding domain AYJ52_04795 PF00920 Dehydratase family AYJ52_04800 PF00551 Formyl transferase AYJ52_04800 PF02911 Formyl transferase, C-terminal domain AYJ52_04805 PF01029 NusB family AYJ52_04805 PF01189 16S rRNA methyltransferase RsmB/F AYJ52_04810 PF00209 Sodium:neurotransmitter symporter family AYJ52_04820 PF02798 Glutathione S-transferase, N-terminal domain AYJ52_04850 PF00579 tRNA synthetases class I (W and Y) AYJ52_04855 PF03702 Anhydro-N-acetylmuramic acid kinase AYJ52_04860 PF00561 alpha/beta hydrolase fold AYJ52_04865 PF01521 Iron-sulphur cluster biosynthesis AYJ52_04885 PF00005 ABC transporter AYJ52_04885 PF12848 ABC transporter AYJ52_04900 PF01751 Toprim domain AYJ52_04900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_04900 PF18053 DNA gyrase B subunit insert domain AYJ52_04900 PF00986 DNA gyrase B subunit, carboxyl terminus AYJ52_04900 PF00204 DNA gyrase B AYJ52_04905 PF02463 RecF/RecN/SMC N terminal domain AYJ52_04910 PF02767 DNA polymerase III beta subunit, central domain AYJ52_04910 PF00712 DNA polymerase III beta subunit, N-terminal domain AYJ52_04910 PF02768 DNA polymerase III beta subunit, C-terminal domain AYJ52_04915 PF00308 Bacterial dnaA protein AYJ52_04915 PF08299 Bacterial dnaA protein helix-turn-helix AYJ52_04915 PF11638 DnaA N-terminal domain AYJ52_04920 PF00468 Ribosomal protein L34 AYJ52_04925 PF00825 Ribonuclease P AYJ52_04930 PF01809 Putative membrane protein insertion efficiency factor AYJ52_04935 PF14849 YidC periplasmic domain AYJ52_04935 PF02096 60Kd inner membrane protein AYJ52_04940 PF10396 GTP-binding protein TrmE N-terminus AYJ52_04940 PF12631 MnmE helical domain AYJ52_04940 PF01926 50S ribosome-binding GTPase AYJ52_04945 PF02583 Metal-sensitive transcriptional repressor AYJ52_04950 PF01545 Cation efflux family AYJ52_04950 PF16916 Dimerisation domain of Zinc Transporter AYJ52_04955 PF13098 Thioredoxin-like domain AYJ52_04955 PF10411 Disulfide bond isomerase protein N-terminus AYJ52_04965 PF00156 Phosphoribosyl transferase domain AYJ52_04970 PF01979 Amidohydrolase family AYJ52_04975 PF00355 Rieske [2Fe-2S] domain AYJ52_04980 PF03738 Glutathionylspermidine synthase preATP-grasp AYJ52_04990 PF03741 Integral membrane protein TerC family AYJ52_04995 PF01569 PAP2 superfamily AYJ52_05005 PF02875 Mur ligase family, glutamate ligase domain AYJ52_05005 PF01225 Mur ligase family, catalytic domain AYJ52_05005 PF08245 Mur ligase middle domain AYJ52_05020 PF00731 AIR carboxylase AYJ52_05025 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AYJ52_05025 PF02222 ATP-grasp domain AYJ52_05030 PF13406 Transglycosylase SLT domain AYJ52_05050 PF00012 Hsp70 protein AYJ52_05055 PF01025 GrpE AYJ52_05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_05060 PF03466 LysR substrate binding domain AYJ52_05080 PF07859 alpha/beta hydrolase fold AYJ52_05085 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AYJ52_05125 PF00665 Integrase core domain AYJ52_05125 PF13276 HTH-like domain AYJ52_05125 PF13333 Integrase core domain AYJ52_05135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYJ52_05140 PF01252 Signal peptidase (SPase) II AYJ52_05145 PF08264 Anticodon-binding domain of tRNA AYJ52_05145 PF00133 tRNA synthetases class I (I, L, M and V) AYJ52_05145 PF06827 Zinc finger found in FPG and IleRS AYJ52_05150 PF01687 Riboflavin kinase AYJ52_05150 PF06574 FAD synthetase AYJ52_05160 PF01048 Phosphorylase superfamily AYJ52_05165 PF08362 YcdC-like protein, C-terminal region AYJ52_05165 PF00440 Bacterial regulatory proteins, tetR family AYJ52_05170 PF00005 ABC transporter AYJ52_05175 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_05180 PF00296 Luciferase-like monooxygenase AYJ52_05185 PF09084 NMT1/THI5 like AYJ52_05190 PF09084 NMT1/THI5 like AYJ52_05195 PF00696 Amino acid kinase family AYJ52_05195 PF00583 Acetyltransferase (GNAT) family AYJ52_05210 PF00106 short chain dehydrogenase AYJ52_05215 PF13419 Haloacid dehalogenase-like hydrolase AYJ52_05225 PF01323 DSBA-like thioredoxin domain AYJ52_05230 PF08360 QacR-like protein, C-terminal region AYJ52_05230 PF00440 Bacterial regulatory proteins, tetR family AYJ52_05235 PF00440 Bacterial regulatory proteins, tetR family AYJ52_05240 PF00175 Oxidoreductase NAD-binding domain AYJ52_05245 PF00487 Fatty acid desaturase AYJ52_05250 PF03725 3' exoribonuclease family, domain 2 AYJ52_05250 PF01138 3' exoribonuclease family, domain 1 AYJ52_05255 PF04185 Phosphoesterase family AYJ52_05255 PF05506 Domain of unknown function (DUF756) AYJ52_05260 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AYJ52_05260 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AYJ52_05265 PF01510 N-acetylmuramoyl-L-alanine amidase AYJ52_05270 PF03023 Lipid II flippase MurJ AYJ52_05275 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AYJ52_05275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYJ52_05280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYJ52_05280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AYJ52_05285 PF13807 G-rich domain on putative tyrosine kinase AYJ52_05285 PF02706 Chain length determinant protein AYJ52_05285 PF13614 AAA domain AYJ52_05290 PF01451 Low molecular weight phosphotyrosine protein phosphatase AYJ52_05295 PF02563 Polysaccharide biosynthesis/export protein AYJ52_05295 PF10531 SLBB domain AYJ52_05295 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AYJ52_05300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AYJ52_05300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AYJ52_05300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AYJ52_05310 PF00535 Glycosyl transferase family 2 AYJ52_05330 PF00535 Glycosyl transferase family 2 AYJ52_05335 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AYJ52_05335 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AYJ52_05340 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_05340 PF14602 Hexapeptide repeat of succinyl-transferase AYJ52_05340 PF12804 MobA-like NTP transferase domain AYJ52_05350 PF02397 Bacterial sugar transferase AYJ52_05355 PF00483 Nucleotidyl transferase AYJ52_05360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AYJ52_05360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AYJ52_05360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AYJ52_05365 PF00342 Phosphoglucose isomerase AYJ52_05370 PF16363 GDP-mannose 4,6 dehydratase AYJ52_05375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYJ52_05375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYJ52_05375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYJ52_05375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYJ52_05380 PF02652 L-lactate permease AYJ52_05385 PF07729 FCD domain AYJ52_05385 PF00392 Bacterial regulatory proteins, gntR family AYJ52_05390 PF01070 FMN-dependent dehydrogenase AYJ52_05395 PF09330 D-lactate dehydrogenase, membrane binding AYJ52_05395 PF01565 FAD binding domain AYJ52_05400 PF00155 Aminotransferase class I and II AYJ52_05405 PF00392 Bacterial regulatory proteins, gntR family AYJ52_05405 PF07729 FCD domain AYJ52_05415 PF00285 Citrate synthase, C-terminal domain AYJ52_05420 PF00694 Aconitase C-terminal domain AYJ52_05420 PF00330 Aconitase family (aconitate hydratase) AYJ52_05490 PF08240 Alcohol dehydrogenase GroES-like domain AYJ52_05490 PF00107 Zinc-binding dehydrogenase AYJ52_05505 PF02525 Flavodoxin-like fold AYJ52_05515 PF17926 Tetracyclin repressor-like, C-terminal domain AYJ52_05515 PF00440 Bacterial regulatory proteins, tetR family AYJ52_05520 PF08361 MAATS-type transcriptional repressor, C-terminal region AYJ52_05520 PF00440 Bacterial regulatory proteins, tetR family AYJ52_05540 PF00849 RNA pseudouridylate synthase AYJ52_05555 PF07715 TonB-dependent Receptor Plug Domain AYJ52_05555 PF00593 TonB dependent receptor AYJ52_05565 PF01037 Lrp/AsnC ligand binding domain AYJ52_05570 PF01266 FAD dependent oxidoreductase AYJ52_05575 PF01168 Alanine racemase, N-terminal domain AYJ52_05575 PF00842 Alanine racemase, C-terminal domain AYJ52_05580 PF01042 Endoribonuclease L-PSP AYJ52_05585 PF00324 Amino acid permease AYJ52_05590 PF00324 Amino acid permease AYJ52_05600 PF00171 Aldehyde dehydrogenase family AYJ52_05605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYJ52_05605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYJ52_05610 PF13193 AMP-binding enzyme C-terminal domain AYJ52_05610 PF00501 AMP-binding enzyme AYJ52_05615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_05615 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_05615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_05620 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_05625 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_05630 PF00083 Sugar (and other) transporter AYJ52_05630 PF07690 Major Facilitator Superfamily AYJ52_05635 PF00765 Autoinducer synthase AYJ52_05645 PF00196 Bacterial regulatory proteins, luxR family AYJ52_05645 PF03472 Autoinducer binding domain AYJ52_05650 PF00501 AMP-binding enzyme AYJ52_05655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_05655 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_05655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_05660 PF14765 Polyketide synthase dehydratase AYJ52_05660 PF08242 Methyltransferase domain AYJ52_05660 PF02801 Beta-ketoacyl synthase, C-terminal domain AYJ52_05660 PF00109 Beta-ketoacyl synthase, N-terminal domain AYJ52_05660 PF16197 Ketoacyl-synthetase C-terminal extension AYJ52_05660 PF00975 Thioesterase domain AYJ52_05660 PF00550 Phosphopantetheine attachment site AYJ52_05665 PF00550 Phosphopantetheine attachment site AYJ52_05665 PF00975 Thioesterase domain AYJ52_05665 PF00668 Condensation domain AYJ52_05665 PF13193 AMP-binding enzyme C-terminal domain AYJ52_05665 PF00501 AMP-binding enzyme AYJ52_05680 PF16363 GDP-mannose 4,6 dehydratase AYJ52_05685 PF01648 4'-phosphopantetheinyl transferase superfamily AYJ52_05700 PF01722 BolA-like protein AYJ52_05710 PF13614 AAA domain AYJ52_05725 PF09335 SNARE associated Golgi protein AYJ52_05730 PF07681 DoxX AYJ52_05735 PF04286 Protein of unknown function (DUF445) AYJ52_05740 PF00117 Glutamine amidotransferase class-I AYJ52_05740 PF00958 GMP synthase C terminal domain AYJ52_05740 PF02540 NAD synthase AYJ52_05745 PF13427 Domain of unknown function (DUF4111) AYJ52_05745 PF01909 Nucleotidyltransferase domain AYJ52_05750 PF03551 Transcriptional regulator PadR-like family AYJ52_05760 PF02678 Pirin AYJ52_05760 PF05726 Pirin C-terminal cupin domain AYJ52_05780 PF05746 DALR anticodon binding domain AYJ52_05780 PF03485 Arginyl tRNA synthetase N terminal domain AYJ52_05780 PF00750 tRNA synthetases class I (R) AYJ52_05785 PF00390 Malic enzyme, N-terminal domain AYJ52_05785 PF03949 Malic enzyme, NAD binding domain AYJ52_05790 PF04261 Dyp-type peroxidase family AYJ52_05795 PF01810 LysE type translocator AYJ52_05800 PF00950 ABC 3 transport family AYJ52_05805 PF00005 ABC transporter AYJ52_05825 PF00119 ATP synthase A chain AYJ52_05830 PF00137 ATP synthase subunit C AYJ52_05835 PF00430 ATP synthase B/B' CF(0) AYJ52_05840 PF00213 ATP synthase delta (OSCP) subunit AYJ52_05845 PF02874 ATP synthase alpha/beta family, beta-barrel domain AYJ52_05845 PF00306 ATP synthase alpha/beta chain, C terminal domain AYJ52_05845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYJ52_05850 PF00231 ATP synthase AYJ52_05855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYJ52_05855 PF02874 ATP synthase alpha/beta family, beta-barrel domain AYJ52_05860 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AYJ52_05865 PF11008 Protein of unknown function (DUF2846) AYJ52_05875 PF00255 Glutathione peroxidase AYJ52_05885 PF07690 Major Facilitator Superfamily AYJ52_05890 PF00440 Bacterial regulatory proteins, tetR family AYJ52_05895 PF00892 EamA-like transporter family AYJ52_05900 PF01300 Telomere recombination AYJ52_05905 PF02481 DNA recombination-mediator protein A AYJ52_05905 PF17782 DprA winged helix domain AYJ52_05915 PF01327 Polypeptide deformylase AYJ52_05940 PF00440 Bacterial regulatory proteins, tetR family AYJ52_05970 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_05985 PF03358 NADPH-dependent FMN reductase AYJ52_06005 PF11842 Domain of unknown function (DUF3362) AYJ52_06005 PF04055 Radical SAM superfamily AYJ52_06005 PF08497 Radical SAM N-terminal AYJ52_06025 PF06123 Inner membrane protein CreD AYJ52_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_06030 PF00672 HAMP domain AYJ52_06030 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_06035 PF00486 Transcriptional regulatory protein, C terminal AYJ52_06035 PF00072 Response regulator receiver domain AYJ52_06040 PF11799 impB/mucB/samB family C-terminal domain AYJ52_06040 PF00817 impB/mucB/samB family AYJ52_06040 PF11798 IMS family HHH motif AYJ52_06045 PF01183 Glycosyl hydrolases family 25 AYJ52_06050 PF07690 Major Facilitator Superfamily AYJ52_06055 PF03641 Possible lysine decarboxylase AYJ52_06060 PF03741 Integral membrane protein TerC family AYJ52_06060 PF03471 Transporter associated domain AYJ52_06065 PF02810 SEC-C motif AYJ52_06070 PF03458 UPF0126 domain AYJ52_06075 PF07690 Major Facilitator Superfamily AYJ52_06080 PF00521 DNA gyrase/topoisomerase IV, subunit A AYJ52_06080 PF03989 DNA gyrase C-terminal domain, beta-propeller AYJ52_06085 PF00501 AMP-binding enzyme AYJ52_06085 PF13193 AMP-binding enzyme C-terminal domain AYJ52_06100 PF00719 Inorganic pyrophosphatase AYJ52_06105 PF03573 outer membrane porin, OprD family AYJ52_06120 PF00701 Dihydrodipicolinate synthetase family AYJ52_06125 PF00596 Class II Aldolase and Adducin N-terminal domain AYJ52_06130 PF00155 Aminotransferase class I and II AYJ52_06130 PF00392 Bacterial regulatory proteins, gntR family AYJ52_06135 PF03358 NADPH-dependent FMN reductase AYJ52_06140 PF00665 Integrase core domain AYJ52_06140 PF13333 Integrase core domain AYJ52_06140 PF13276 HTH-like domain AYJ52_06145 PF01527 Transposase AYJ52_06150 PF01078 Magnesium chelatase, subunit ChlI AYJ52_06150 PF13335 Magnesium chelatase, subunit ChlI C-terminal AYJ52_06195 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_06205 PF00376 MerR family regulatory protein AYJ52_06205 PF09278 MerR, DNA binding AYJ52_06210 PF00403 Heavy-metal-associated domain AYJ52_06215 PF01022 Bacterial regulatory protein, arsR family AYJ52_06225 PF01545 Cation efflux family AYJ52_06230 PF00529 HlyD membrane-fusion protein of T1SS AYJ52_06230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYJ52_06235 PF00873 AcrB/AcrD/AcrF family AYJ52_06240 PF02321 Outer membrane efflux protein AYJ52_06255 PF01545 Cation efflux family AYJ52_06255 PF16916 Dimerisation domain of Zinc Transporter AYJ52_06275 PF14461 Prokaryotic E2 family B AYJ52_06275 PF00899 ThiF family AYJ52_06305 PF13936 Helix-turn-helix domain AYJ52_06305 PF00665 Integrase core domain AYJ52_06325 PF00543 Nitrogen regulatory protein P-II AYJ52_06330 PF00909 Ammonium Transporter Family AYJ52_06335 PF03477 ATP cone domain AYJ52_06340 PF01872 RibD C-terminal domain AYJ52_06340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYJ52_06350 PF00677 Lumazine binding domain AYJ52_06370 PF00883 Cytosol aminopeptidase family, catalytic domain AYJ52_06370 PF02789 Cytosol aminopeptidase family, N-terminal domain AYJ52_06380 PF03739 Lipopolysaccharide export system permease LptF/LptG AYJ52_06385 PF01676 Metalloenzyme superfamily AYJ52_06385 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AYJ52_06390 PF03572 Peptidase family S41 AYJ52_06390 PF00595 PDZ domain AYJ52_06395 PF00072 Response regulator receiver domain AYJ52_06395 PF00158 Sigma-54 interaction domain AYJ52_06395 PF02954 Bacterial regulatory protein, Fis family AYJ52_06400 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_06405 PF00072 Response regulator receiver domain AYJ52_06405 PF00196 Bacterial regulatory proteins, luxR family AYJ52_06410 PF00768 D-alanyl-D-alanine carboxypeptidase AYJ52_06415 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_06420 PF01842 ACT domain AYJ52_06420 PF00742 Homoserine dehydrogenase AYJ52_06420 PF03447 Homoserine dehydrogenase, NAD binding domain AYJ52_06425 PF13098 Thioredoxin-like domain AYJ52_06425 PF10411 Disulfide bond isomerase protein N-terminus AYJ52_06430 PF02899 Phage integrase, N-terminal SAM-like domain AYJ52_06430 PF00589 Phage integrase family AYJ52_06440 PF02421 Ferrous iron transport protein B AYJ52_06440 PF07664 Ferrous iron transport protein B C terminus AYJ52_06440 PF07670 Nucleoside recognition AYJ52_06450 PF02875 Mur ligase family, glutamate ligase domain AYJ52_06450 PF08245 Mur ligase middle domain AYJ52_06455 PF01098 Cell cycle protein AYJ52_06460 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYJ52_06465 PF01258 Prokaryotic dksA/traR C4-type zinc finger AYJ52_06470 PF00149 Calcineurin-like phosphoesterase AYJ52_06475 PF00293 NUDIX domain AYJ52_06480 PF13667 ThiC-associated domain AYJ52_06480 PF01964 Radical SAM ThiC family AYJ52_06495 PF00892 EamA-like transporter family AYJ52_06500 PF02321 Outer membrane efflux protein AYJ52_06505 PF01895 PhoU domain AYJ52_06510 PF04362 Bacterial Fe(2+) trafficking AYJ52_06515 PF14698 Argininosuccinate lyase C-terminal AYJ52_06515 PF00206 Lyase AYJ52_06520 PF06580 Histidine kinase AYJ52_06520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_06520 PF07694 5TMR of 5TMR-LYT AYJ52_06525 PF04397 LytTr DNA-binding domain AYJ52_06525 PF00072 Response regulator receiver domain AYJ52_06530 PF03900 Porphobilinogen deaminase, C-terminal domain AYJ52_06530 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AYJ52_06555 PF00816 H-NS histone family AYJ52_06570 PF00263 Bacterial type II and III secretion system protein AYJ52_06570 PF03958 Bacterial type II/III secretion system short domain AYJ52_06575 PF00498 FHA domain AYJ52_06575 PF12401 Protein of unknown function (DUF2662) AYJ52_06580 PF13419 Haloacid dehalogenase-like hydrolase AYJ52_06585 PF04715 Anthranilate synthase component I, N terminal region AYJ52_06585 PF00425 chorismate binding enzyme AYJ52_06610 PF03144 Elongation factor Tu domain 2 AYJ52_06610 PF00009 Elongation factor Tu GTP binding domain AYJ52_06610 PF03143 Elongation factor Tu C-terminal domain AYJ52_06620 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AYJ52_06625 PF02357 Transcription termination factor nusG AYJ52_06625 PF00467 KOW motif AYJ52_06630 PF00298 Ribosomal protein L11, RNA binding domain AYJ52_06630 PF03946 Ribosomal protein L11, N-terminal domain AYJ52_06635 PF00687 Ribosomal protein L1p/L10e family AYJ52_06640 PF00466 Ribosomal protein L10 AYJ52_06645 PF00542 Ribosomal protein L7/L12 C-terminal domain AYJ52_06645 PF16320 Ribosomal protein L7/L12 dimerisation domain AYJ52_06650 PF04560 RNA polymerase Rpb2, domain 7 AYJ52_06650 PF00562 RNA polymerase Rpb2, domain 6 AYJ52_06650 PF04561 RNA polymerase Rpb2, domain 2 AYJ52_06650 PF04565 RNA polymerase Rpb2, domain 3 AYJ52_06650 PF10385 RNA polymerase beta subunit external 1 domain AYJ52_06650 PF04563 RNA polymerase beta subunit AYJ52_06655 PF05000 RNA polymerase Rpb1, domain 4 AYJ52_06655 PF04997 RNA polymerase Rpb1, domain 1 AYJ52_06655 PF04998 RNA polymerase Rpb1, domain 5 AYJ52_06655 PF00623 RNA polymerase Rpb1, domain 2 AYJ52_06655 PF04983 RNA polymerase Rpb1, domain 3 AYJ52_06680 PF03553 Na+/H+ antiporter family AYJ52_06680 PF13726 Na+-H+ antiporter family AYJ52_06695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_06695 PF00183 Hsp90 protein AYJ52_06710 PF01323 DSBA-like thioredoxin domain AYJ52_06735 PF00108 Thiolase, N-terminal domain AYJ52_06735 PF02803 Thiolase, C-terminal domain AYJ52_06740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYJ52_06740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYJ52_06740 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_06770 PF01541 GIY-YIG catalytic domain AYJ52_06770 PF02151 UvrB/uvrC motif AYJ52_06770 PF08459 UvrC Helix-hairpin-helix N-terminal AYJ52_06780 PF01066 CDP-alcohol phosphatidyltransferase AYJ52_06785 PF12833 Helix-turn-helix domain AYJ52_06785 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AYJ52_06785 PF02805 Metal binding domain of Ada AYJ52_06785 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYJ52_06810 PF13533 Biotin-lipoyl like AYJ52_06815 PF03652 Holliday junction resolvase AYJ52_06820 PF02622 Uncharacterized ACR, COG1678 AYJ52_06825 PF02463 RecF/RecN/SMC N terminal domain AYJ52_06835 PF06865 Pyrimidine/purine nucleoside phosphorylase AYJ52_06840 PF00588 SpoU rRNA Methylase family AYJ52_06840 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYJ52_06850 PF01121 Dephospho-CoA kinase AYJ52_06855 PF06750 Bacterial Peptidase A24 N-terminal domain AYJ52_06855 PF01478 Type IV leader peptidase family AYJ52_06860 PF00482 Type II secretion system (T2SS), protein F AYJ52_06865 PF00437 Type II/IV secretion system protein AYJ52_06865 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AYJ52_06870 PF00121 Triosephosphate isomerase AYJ52_06875 PF03840 Preprotein translocase SecG subunit AYJ52_06895 PF17384 RimP C-terminal SH3 domain AYJ52_06895 PF02576 RimP N-terminal domain AYJ52_06900 PF08529 NusA N-terminal domain AYJ52_06900 PF00575 S1 RNA binding domain AYJ52_06900 PF13184 NusA-like KH domain AYJ52_06905 PF08364 Bacterial translation initiation factor IF-2 associated region AYJ52_06905 PF00009 Elongation factor Tu GTP binding domain AYJ52_06905 PF04760 Translation initiation factor IF-2, N-terminal region AYJ52_06905 PF11987 Translation-initiation factor 2 AYJ52_06910 PF02033 Ribosome-binding factor A AYJ52_06920 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AYJ52_06930 PF00361 Proton-conducting membrane transporter AYJ52_06935 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AYJ52_06940 PF13244 Domain of unknown function (DUF4040) AYJ52_06940 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AYJ52_06940 PF00361 Proton-conducting membrane transporter AYJ52_06940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AYJ52_06955 PF01502 Phosphoribosyl-AMP cyclohydrolase AYJ52_06960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYJ52_06965 PF01494 FAD binding domain AYJ52_06970 PF03109 ABC1 family AYJ52_06980 PF01209 ubiE/COQ5 methyltransferase family AYJ52_06990 PF03976 Polyphosphate kinase 2 (PPK2) AYJ52_07000 PF17946 RecC C-terminal domain AYJ52_07005 PF12705 PD-(D/E)XK nuclease superfamily AYJ52_07005 PF00580 UvrD/REP helicase N-terminal domain AYJ52_07005 PF13361 UvrD-like helicase C-terminal domain AYJ52_07010 PF13538 UvrD-like helicase C-terminal domain AYJ52_07020 PF00312 Ribosomal protein S15 AYJ52_07025 PF00013 KH domain AYJ52_07025 PF00575 S1 RNA binding domain AYJ52_07025 PF03725 3' exoribonuclease family, domain 2 AYJ52_07025 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AYJ52_07025 PF01138 3' exoribonuclease family, domain 1 AYJ52_07030 PF01544 CorA-like Mg2+ transporter protein AYJ52_07040 PF01556 DnaJ C terminal domain AYJ52_07040 PF00226 DnaJ domain AYJ52_07050 PF01430 Hsp33 protein AYJ52_07055 PF00999 Sodium/hydrogen exchanger family AYJ52_07055 PF02254 TrkA-N domain AYJ52_07060 PF17764 3′ DNA-binding domain (3′BD) AYJ52_07060 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AYJ52_07060 PF18074 Primosomal protein N C-terminal domain AYJ52_07060 PF00270 DEAD/DEAH box helicase AYJ52_07060 PF00271 Helicase conserved C-terminal domain AYJ52_07065 PF00482 Type II secretion system (T2SS), protein F AYJ52_07070 PF07963 Prokaryotic N-terminal methylation motif AYJ52_07070 PF08334 Type II secretion system (T2SS), protein G AYJ52_07080 PF01588 Putative tRNA binding domain AYJ52_07085 PF00795 Carbon-nitrogen hydrolase AYJ52_07090 PF00571 CBS domain AYJ52_07090 PF03471 Transporter associated domain AYJ52_07095 PF01206 Sulfurtransferase TusA AYJ52_07115 PF01177 Asp/Glu/Hydantoin racemase AYJ52_07125 PF00762 Ferrochelatase AYJ52_07130 PF00753 Metallo-beta-lactamase superfamily AYJ52_07135 PF03884 DNA gyrase inhibitor YacG AYJ52_07145 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AYJ52_07145 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_07155 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AYJ52_07165 PF01197 Ribosomal protein L31 AYJ52_07170 PF03109 ABC1 family AYJ52_07175 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_07175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_07180 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_07180 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_07180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_07185 PF01554 MatE AYJ52_07195 PF06969 HemN C-terminal domain AYJ52_07195 PF04055 Radical SAM superfamily AYJ52_07200 PF00106 short chain dehydrogenase AYJ52_07205 PF03466 LysR substrate binding domain AYJ52_07205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_07220 PF13193 AMP-binding enzyme C-terminal domain AYJ52_07220 PF00501 AMP-binding enzyme AYJ52_07225 PF10150 Ribonuclease E/G family AYJ52_07225 PF00575 S1 RNA binding domain AYJ52_07225 PF12111 Polyribonucleotide phosphorylase C terminal AYJ52_07230 PF00849 RNA pseudouridylate synthase AYJ52_07230 PF01479 S4 domain AYJ52_07235 PF13419 Haloacid dehalogenase-like hydrolase AYJ52_07240 PF08279 HTH domain AYJ52_07240 PF13280 WYL domain AYJ52_07245 PF02798 Glutathione S-transferase, N-terminal domain AYJ52_07255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_07255 PF03466 LysR substrate binding domain AYJ52_07260 PF12706 Beta-lactamase superfamily domain AYJ52_07265 PF00141 Peroxidase AYJ52_07270 PF05524 PEP-utilising enzyme, N-terminal AYJ52_07270 PF00391 PEP-utilising enzyme, mobile domain AYJ52_07270 PF02896 PEP-utilising enzyme, TIM barrel domain AYJ52_07270 PF01590 GAF domain AYJ52_07275 PF00293 NUDIX domain AYJ52_07295 PF03466 LysR substrate binding domain AYJ52_07295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_07305 PF00330 Aconitase family (aconitate hydratase) AYJ52_07310 PF00694 Aconitase C-terminal domain AYJ52_07320 PF00180 Isocitrate/isopropylmalate dehydrogenase AYJ52_07335 PF01176 Translation initiation factor 1A / IF-1 AYJ52_07345 PF01416 tRNA pseudouridine synthase AYJ52_07365 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYJ52_07365 PF02774 Semialdehyde dehydrogenase, dimerisation domain AYJ52_07375 PF00375 Sodium:dicarboxylate symporter family AYJ52_07385 PF03279 Bacterial lipid A biosynthesis acyltransferase AYJ52_07400 PF04102 SlyX AYJ52_07405 PF00107 Zinc-binding dehydrogenase AYJ52_07405 PF08240 Alcohol dehydrogenase GroES-like domain AYJ52_07410 PF01638 HxlR-like helix-turn-helix AYJ52_07420 PF01131 DNA topoisomerase AYJ52_07420 PF08272 Topoisomerase I zinc-ribbon-like AYJ52_07420 PF01751 Toprim domain AYJ52_07420 PF01396 Topoisomerase DNA binding C4 zinc finger AYJ52_07435 PF00580 UvrD/REP helicase N-terminal domain AYJ52_07435 PF13361 UvrD-like helicase C-terminal domain AYJ52_07440 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AYJ52_07460 PF02254 TrkA-N domain AYJ52_07460 PF00999 Sodium/hydrogen exchanger family AYJ52_07465 PF00471 Ribosomal protein L33 AYJ52_07470 PF00830 Ribosomal L28 family AYJ52_07475 PF00171 Aldehyde dehydrogenase family AYJ52_07485 PF00551 Formyl transferase AYJ52_07485 PF01842 ACT domain AYJ52_07495 PF01618 MotA/TolQ/ExbB proton channel family AYJ52_07505 PF01625 Peptide methionine sulfoxide reductase AYJ52_07515 PF00186 Dihydrofolate reductase AYJ52_07520 PF00303 Thymidylate synthase AYJ52_07535 PF01790 Prolipoprotein diacylglyceryl transferase AYJ52_07555 PF00902 Sec-independent protein translocase protein (TatC) AYJ52_07560 PF02416 mttA/Hcf106 family AYJ52_07565 PF02416 mttA/Hcf106 family AYJ52_07575 PF01725 Ham1 family AYJ52_07585 PF00561 alpha/beta hydrolase fold AYJ52_07585 PF07021 Methionine biosynthesis protein MetW AYJ52_07590 PF00561 alpha/beta hydrolase fold AYJ52_07595 PF08502 LeuA allosteric (dimerisation) domain AYJ52_07595 PF00682 HMGL-like AYJ52_07600 PF18331 PKHD-type hydroxylase C-terminal domain AYJ52_07600 PF13640 2OG-Fe(II) oxygenase superfamily AYJ52_07605 PF00593 TonB dependent receptor AYJ52_07605 PF07715 TonB-dependent Receptor Plug Domain AYJ52_07610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYJ52_07610 PF05697 Bacterial trigger factor protein (TF) AYJ52_07610 PF05698 Bacterial trigger factor protein (TF) C-terminus AYJ52_07615 PF00574 Clp protease AYJ52_07620 PF06689 ClpX C4-type zinc finger AYJ52_07620 PF10431 C-terminal, D2-small domain, of ClpB protein AYJ52_07620 PF07724 AAA domain (Cdc48 subfamily) AYJ52_07635 PF05683 Fumarase C-terminus AYJ52_07635 PF05681 Fumarate hydratase (Fumerase) AYJ52_07640 PF07085 DRTGG domain AYJ52_07640 PF01515 Phosphate acetyl/butaryl transferase AYJ52_07645 PF00871 Acetokinase family AYJ52_07650 PF00920 Dehydratase family AYJ52_07655 PF01081 KDPG and KHG aldolase AYJ52_07660 PF02447 GntP family permease AYJ52_07665 PF01202 Shikimate kinase AYJ52_07670 PF00171 Aldehyde dehydrogenase family AYJ52_07675 PF00171 Aldehyde dehydrogenase family AYJ52_07680 PF00561 alpha/beta hydrolase fold AYJ52_07690 PF00933 Glycosyl hydrolase family 3 N terminal domain AYJ52_07695 PF11818 C-terminal domain of tail specific protease (DUF3340) AYJ52_07695 PF00595 PDZ domain AYJ52_07695 PF03572 Peptidase family S41 AYJ52_07695 PF17804 Tail specific protease N-terminal domain AYJ52_07700 PF00534 Glycosyl transferases group 1 AYJ52_07700 PF13439 Glycosyltransferase Family 4 AYJ52_07705 PF01569 PAP2 superfamily AYJ52_07710 PF04384 Iron-sulphur cluster assembly AYJ52_07715 PF00334 Nucleoside diphosphate kinase AYJ52_07720 PF04055 Radical SAM superfamily AYJ52_07730 PF13464 Domain of unknown function (DUF4115) AYJ52_07735 PF04551 GcpE protein AYJ52_07740 PF13393 Histidyl-tRNA synthetase AYJ52_07740 PF03129 Anticodon binding domain AYJ52_07750 PF13360 PQQ-like domain AYJ52_07750 PF01011 PQQ enzyme repeat AYJ52_07755 PF01926 50S ribosome-binding GTPase AYJ52_07755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AYJ52_07770 PF00550 Phosphopantetheine attachment site AYJ52_07775 PF00550 Phosphopantetheine attachment site AYJ52_07785 PF00501 AMP-binding enzyme AYJ52_07785 PF13193 AMP-binding enzyme C-terminal domain AYJ52_07790 PF00535 Glycosyl transferase family 2 AYJ52_07800 PF00221 Aromatic amino acid lyase AYJ52_07820 PF04820 Tryptophan halogenase AYJ52_07830 PF00109 Beta-ketoacyl synthase, N-terminal domain AYJ52_07830 PF02801 Beta-ketoacyl synthase, C-terminal domain AYJ52_07845 PF00109 Beta-ketoacyl synthase, N-terminal domain AYJ52_07845 PF02801 Beta-ketoacyl synthase, C-terminal domain AYJ52_07860 PF02556 Preprotein translocase subunit SecB AYJ52_07865 PF00462 Glutaredoxin AYJ52_07875 PF03193 RsgA GTPase AYJ52_07880 PF00929 Exonuclease AYJ52_07895 PF02321 Outer membrane efflux protein AYJ52_07900 PF12704 MacB-like periplasmic core domain AYJ52_07900 PF00005 ABC transporter AYJ52_07900 PF02687 FtsX-like permease family AYJ52_07905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYJ52_07920 PF08264 Anticodon-binding domain of tRNA AYJ52_07920 PF00133 tRNA synthetases class I (I, L, M and V) AYJ52_07920 PF13603 Leucyl-tRNA synthetase, Domain 2 AYJ52_07920 PF09334 tRNA synthetases class I (M) AYJ52_07925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYJ52_07925 PF00205 Thiamine pyrophosphate enzyme, central domain AYJ52_07925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYJ52_07930 PF10369 Small subunit of acetolactate synthase AYJ52_07935 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AYJ52_07935 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AYJ52_07940 PF00990 Diguanylate cyclase, GGDEF domain AYJ52_07940 PF03707 Bacterial signalling protein N terminal repeat AYJ52_07940 PF00563 EAL domain AYJ52_07950 PF13359 DDE superfamily endonuclease AYJ52_07950 PF13613 Helix-turn-helix of DDE superfamily endonuclease AYJ52_07955 PF13613 Helix-turn-helix of DDE superfamily endonuclease AYJ52_07955 PF13359 DDE superfamily endonuclease AYJ52_07980 PF13276 HTH-like domain AYJ52_07980 PF00665 Integrase core domain AYJ52_07980 PF13333 Integrase core domain AYJ52_07985 PF01527 Transposase AYJ52_08020 PF01389 OmpA-like transmembrane domain AYJ52_08020 PF00691 OmpA family AYJ52_08100 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system AYJ52_08105 PF13340 Putative transposase of IS4/5 family (DUF4096) AYJ52_08120 PF18273 Type III R-M EcoP15I C-terminal domain AYJ52_08120 PF01555 DNA methylase AYJ52_08125 PF00872 Transposase, Mutator family AYJ52_08140 PF13784 Fic/DOC family N-terminal AYJ52_08140 PF02661 Fic/DOC family AYJ52_08165 PF16658 Class II release factor RF3, C-terminal domain AYJ52_08165 PF03144 Elongation factor Tu domain 2 AYJ52_08165 PF00009 Elongation factor Tu GTP binding domain AYJ52_08180 PF01026 TatD related DNase AYJ52_08185 PF00694 Aconitase C-terminal domain AYJ52_08185 PF00330 Aconitase family (aconitate hydratase) AYJ52_08190 PF00899 ThiF family AYJ52_08195 PF03466 LysR substrate binding domain AYJ52_08195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_08205 PF01207 Dihydrouridine synthase (Dus) AYJ52_08210 PF00589 Phage integrase family AYJ52_08280 PF00672 HAMP domain AYJ52_08280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_08280 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_08285 PF00486 Transcriptional regulatory protein, C terminal AYJ52_08285 PF00072 Response regulator receiver domain AYJ52_08295 PF00394 Multicopper oxidase AYJ52_08295 PF07731 Multicopper oxidase AYJ52_08295 PF07732 Multicopper oxidase AYJ52_08315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYJ52_08320 PF00873 AcrB/AcrD/AcrF family AYJ52_08330 PF07670 Nucleoside recognition AYJ52_08330 PF02421 Ferrous iron transport protein B AYJ52_08330 PF07664 Ferrous iron transport protein B C terminus AYJ52_08345 PF13411 MerR HTH family regulatory protein AYJ52_08355 PF00665 Integrase core domain AYJ52_08355 PF13936 Helix-turn-helix domain AYJ52_08365 PF07690 Major Facilitator Superfamily AYJ52_08375 PF00892 EamA-like transporter family AYJ52_08380 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AYJ52_08380 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AYJ52_08385 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AYJ52_08390 PF02233 NAD(P) transhydrogenase beta subunit AYJ52_08395 PF00106 short chain dehydrogenase AYJ52_08405 PF01261 Xylose isomerase-like TIM barrel AYJ52_08410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYJ52_08410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYJ52_08415 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_08420 PF00672 HAMP domain AYJ52_08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_08420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AYJ52_08420 PF01627 Hpt domain AYJ52_08420 PF00072 Response regulator receiver domain AYJ52_08420 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_08425 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_08435 PF05958 tRNA (Uracil-5-)-methyltransferase AYJ52_08440 PF02824 TGS domain AYJ52_08440 PF04607 Region found in RelA / SpoT proteins AYJ52_08440 PF13291 ACT domain AYJ52_08450 PF03819 MazG nucleotide pyrophosphohydrolase domain AYJ52_08460 PF12626 Polymerase A arginine-rich C-terminus AYJ52_08460 PF12627 Probable RNA and SrmB- binding site of polymerase A AYJ52_08460 PF01743 Poly A polymerase head domain AYJ52_08465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AYJ52_08470 PF02548 Ketopantoate hydroxymethyltransferase AYJ52_08475 PF02569 Pantoate-beta-alanine ligase AYJ52_08480 PF03668 P-loop ATPase protein family AYJ52_08485 PF00381 PTS HPr component phosphorylation site AYJ52_08490 PF04751 Protein of unknown function (DUF615) AYJ52_08495 PF00501 AMP-binding enzyme AYJ52_08495 PF13193 AMP-binding enzyme C-terminal domain AYJ52_08500 PF03129 Anticodon binding domain AYJ52_08500 PF02824 TGS domain AYJ52_08500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYJ52_08500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYJ52_08505 PF05198 Translation initiation factor IF-3, N-terminal domain AYJ52_08505 PF00707 Translation initiation factor IF-3, C-terminal domain AYJ52_08510 PF02798 Glutathione S-transferase, N-terminal domain AYJ52_08510 PF00043 Glutathione S-transferase, C-terminal domain AYJ52_08520 PF07690 Major Facilitator Superfamily AYJ52_08530 PF01632 Ribosomal protein L35 AYJ52_08535 PF00453 Ribosomal protein L20 AYJ52_08555 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AYJ52_08555 PF01409 tRNA synthetases class II core domain (F) AYJ52_08560 PF03147 Ferredoxin-fold anticodon binding domain AYJ52_08560 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AYJ52_08560 PF01588 Putative tRNA binding domain AYJ52_08560 PF03483 B3/4 domain AYJ52_08560 PF03484 tRNA synthetase B5 domain AYJ52_08565 PF00216 Bacterial DNA-binding protein AYJ52_08575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYJ52_08575 PF07498 Rho termination factor, N-terminal domain AYJ52_08575 PF07497 Rho termination factor, RNA-binding domain AYJ52_08580 PF00085 Thioredoxin AYJ52_08585 PF02541 Ppx/GppA phosphatase family AYJ52_08590 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AYJ52_08595 PF11734 TilS substrate C-terminal domain AYJ52_08595 PF01171 PP-loop family AYJ52_08595 PF09179 TilS substrate binding domain AYJ52_08600 PF03807 NADP oxidoreductase coenzyme F420-dependent AYJ52_08600 PF14748 Pyrroline-5-carboxylate reductase dimerisation AYJ52_08605 PF02325 YGGT family AYJ52_08610 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AYJ52_08610 PF01612 3'-5' exonuclease AYJ52_08610 PF01367 5'-3' exonuclease, C-terminal SAM fold AYJ52_08610 PF00476 DNA polymerase family A AYJ52_08630 PF00437 Type II/IV secretion system protein AYJ52_08635 PF02566 OsmC-like protein AYJ52_08640 PF01047 MarR family AYJ52_08650 PF00795 Carbon-nitrogen hydrolase AYJ52_08695 PF00309 Sigma-54 factor, Activator interacting domain (AID) AYJ52_08695 PF04552 Sigma-54, DNA binding domain AYJ52_08695 PF04963 Sigma-54 factor, core binding domain AYJ52_08700 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AYJ52_08705 PF01722 BolA-like protein AYJ52_08710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYJ52_08715 PF01634 ATP phosphoribosyltransferase AYJ52_08720 PF00815 Histidinol dehydrogenase AYJ52_08725 PF00155 Aminotransferase class I and II AYJ52_08730 PF04715 Anthranilate synthase component I, N terminal region AYJ52_08730 PF00425 chorismate binding enzyme AYJ52_08770 PF00293 NUDIX domain AYJ52_08775 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_08780 PF00814 Glycoprotease family AYJ52_08785 PF04445 Putative SAM-dependent methyltransferase AYJ52_08795 PF00756 Putative esterase AYJ52_08805 PF00834 Ribulose-phosphate 3 epimerase family AYJ52_08820 PF00394 Multicopper oxidase AYJ52_08820 PF07731 Multicopper oxidase AYJ52_08820 PF07732 Multicopper oxidase AYJ52_08835 PF00893 Small Multidrug Resistance protein AYJ52_08840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AYJ52_08840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYJ52_08845 PF01960 ArgJ family AYJ52_08850 PF02445 Quinolinate synthetase A protein AYJ52_08875 PF00962 Adenosine/AMP deaminase AYJ52_08880 PF08240 Alcohol dehydrogenase GroES-like domain AYJ52_08880 PF00107 Zinc-binding dehydrogenase AYJ52_08885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_08885 PF03466 LysR substrate binding domain AYJ52_08890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_08890 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_08890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_08895 PF07690 Major Facilitator Superfamily AYJ52_08900 PF02515 CoA-transferase family III AYJ52_08910 PF17932 Tetracyclin repressor-like, C-terminal domain AYJ52_08910 PF00440 Bacterial regulatory proteins, tetR family AYJ52_08925 PF14537 Cytochrome c3 AYJ52_08925 PF00890 FAD binding domain AYJ52_08930 PF03466 LysR substrate binding domain AYJ52_08930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_08940 PF07690 Major Facilitator Superfamily AYJ52_08945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_08945 PF03466 LysR substrate binding domain AYJ52_08960 PF01970 Tripartite tricarboxylate transporter TctA family AYJ52_08975 PF01546 Peptidase family M20/M25/M40 AYJ52_08975 PF07687 Peptidase dimerisation domain AYJ52_08980 PF12833 Helix-turn-helix domain AYJ52_08980 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AYJ52_08990 PF01810 LysE type translocator AYJ52_08995 PF03466 LysR substrate binding domain AYJ52_08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_09005 PF01717 Cobalamin-independent synthase, Catalytic domain AYJ52_09005 PF08267 Cobalamin-independent synthase, N-terminal domain AYJ52_09010 PF01613 Flavin reductase like domain AYJ52_09025 PF02321 Outer membrane efflux protein AYJ52_09030 PF03412 Peptidase C39 family AYJ52_09030 PF00664 ABC transporter transmembrane region AYJ52_09030 PF00005 ABC transporter AYJ52_09035 PF13533 Biotin-lipoyl like AYJ52_09055 PF00534 Glycosyl transferases group 1 AYJ52_09055 PF09318 Glycosyl transferase 1 domain A AYJ52_09060 PF00665 Integrase core domain AYJ52_09060 PF13936 Helix-turn-helix domain AYJ52_09070 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_09090 PF13936 Helix-turn-helix domain AYJ52_09090 PF00665 Integrase core domain AYJ52_09100 PF13936 Helix-turn-helix domain AYJ52_09100 PF00665 Integrase core domain AYJ52_09105 PF00268 Ribonucleotide reductase, small chain AYJ52_09110 PF02867 Ribonucleotide reductase, barrel domain AYJ52_09110 PF00317 Ribonucleotide reductase, all-alpha domain AYJ52_09110 PF03477 ATP cone domain AYJ52_09115 PF00072 Response regulator receiver domain AYJ52_09115 PF00486 Transcriptional regulatory protein, C terminal AYJ52_09120 PF00672 HAMP domain AYJ52_09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_09120 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_09130 PF00990 Diguanylate cyclase, GGDEF domain AYJ52_09135 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AYJ52_09140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AYJ52_09145 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AYJ52_09145 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AYJ52_09155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AYJ52_09155 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AYJ52_09155 PF10531 SLBB domain AYJ52_09160 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AYJ52_09160 PF00384 Molybdopterin oxidoreductase AYJ52_09160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AYJ52_09165 PF00146 NADH dehydrogenase AYJ52_09170 PF12838 4Fe-4S dicluster domain AYJ52_09175 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AYJ52_09180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AYJ52_09185 PF00361 Proton-conducting membrane transporter AYJ52_09185 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AYJ52_09190 PF00361 Proton-conducting membrane transporter AYJ52_09195 PF00361 Proton-conducting membrane transporter AYJ52_09210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_09210 PF03466 LysR substrate binding domain AYJ52_09215 PF00970 Oxidoreductase FAD-binding domain AYJ52_09215 PF00175 Oxidoreductase NAD-binding domain AYJ52_09230 PF05552 Conserved TM helix AYJ52_09240 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_09245 PF13533 Biotin-lipoyl like AYJ52_09275 PF01588 Putative tRNA binding domain AYJ52_09275 PF09334 tRNA synthetases class I (M) AYJ52_09285 PF10609 NUBPL iron-transfer P-loop NTPase AYJ52_09290 PF01048 Phosphorylase superfamily AYJ52_09305 PF00692 dUTPase AYJ52_09340 PF01207 Dihydrouridine synthase (Dus) AYJ52_09350 PF02978 Signal peptide binding domain AYJ52_09350 PF00448 SRP54-type protein, GTPase domain AYJ52_09350 PF02881 SRP54-type protein, helical bundle domain AYJ52_09355 PF03309 Type III pantothenate kinase AYJ52_09365 PF01925 Sulfite exporter TauE/SafE AYJ52_09375 PF06470 SMC proteins Flexible Hinge Domain AYJ52_09375 PF02463 RecF/RecN/SMC N terminal domain AYJ52_09385 PF03120 NAD-dependent DNA ligase OB-fold domain AYJ52_09385 PF01653 NAD-dependent DNA ligase adenylation domain AYJ52_09385 PF00533 BRCA1 C Terminus (BRCT) domain AYJ52_09385 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AYJ52_09385 PF12826 Helix-hairpin-helix motif AYJ52_09390 PF00210 Ferritin-like domain AYJ52_09395 PF07690 Major Facilitator Superfamily AYJ52_09400 PF00982 Glycosyltransferase family 20 AYJ52_09405 PF02358 Trehalose-phosphatase AYJ52_09410 PF08241 Methyltransferase domain AYJ52_09410 PF12697 Alpha/beta hydrolase family AYJ52_09415 PF04055 Radical SAM superfamily AYJ52_09415 PF00202 Aminotransferase class-III AYJ52_09415 PF06968 Biotin and Thiamin Synthesis associated domain AYJ52_09420 PF00155 Aminotransferase class I and II AYJ52_09435 PF01479 S4 domain AYJ52_09435 PF00849 RNA pseudouridylate synthase AYJ52_09440 PF04079 Segregation and condensation complex subunit ScpB AYJ52_09445 PF02616 Segregation and condensation protein ScpA AYJ52_09450 PF01300 Telomere recombination AYJ52_09455 PF04315 Elongation factor P hydroxylase AYJ52_09460 PF02620 Large ribosomal RNA subunit accumulation protein YceD AYJ52_09465 PF01783 Ribosomal L32p protein family AYJ52_09470 PF00698 Acyl transferase domain AYJ52_09480 PF00550 Phosphopantetheine attachment site AYJ52_09485 PF01476 LysM domain AYJ52_09485 PF04972 BON domain AYJ52_09490 PF08543 Phosphomethylpyrimidine kinase AYJ52_09490 PF02581 Thiamine monophosphate synthase AYJ52_09490 PF03070 TENA/THI-4/PQQC family AYJ52_09500 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AYJ52_09515 PF02261 Aspartate decarboxylase AYJ52_09520 PF01195 Peptidyl-tRNA hydrolase AYJ52_09525 PF01386 Ribosomal L25p family AYJ52_09530 PF14572 Phosphoribosyl synthetase-associated domain AYJ52_09530 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AYJ52_09555 PF00288 GHMP kinases N terminal domain AYJ52_09555 PF08544 GHMP kinases C terminal AYJ52_09560 PF03550 Outer membrane lipoprotein LolB AYJ52_09570 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AYJ52_09570 PF01488 Shikimate / quinate 5-dehydrogenase AYJ52_09570 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AYJ52_09575 PF08275 DNA primase catalytic core, N-terminal domain AYJ52_09575 PF08278 DNA primase DnaG DnaB-binding AYJ52_09575 PF01807 CHC2 zinc finger AYJ52_09575 PF10410 DnaB-helicase binding domain of primase AYJ52_09580 PF13525 Outer membrane lipoprotein AYJ52_09585 PF00849 RNA pseudouridylate synthase AYJ52_09585 PF01479 S4 domain AYJ52_09595 PF03358 NADPH-dependent FMN reductase AYJ52_09600 PF01668 SmpB protein AYJ52_09605 PF01467 Cytidylyltransferase-like AYJ52_09610 PF00037 4Fe-4S binding domain AYJ52_09630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_09630 PF03466 LysR substrate binding domain AYJ52_09635 PF00180 Isocitrate/isopropylmalate dehydrogenase AYJ52_09640 PF02028 BCCT, betaine/carnitine/choline family transporter AYJ52_09645 PF07859 alpha/beta hydrolase fold AYJ52_09650 PF00355 Rieske [2Fe-2S] domain AYJ52_09650 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYJ52_09655 PF00171 Aldehyde dehydrogenase family AYJ52_09660 PF00175 Oxidoreductase NAD-binding domain AYJ52_09660 PF00970 Oxidoreductase FAD-binding domain AYJ52_09660 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_09675 PF00795 Carbon-nitrogen hydrolase AYJ52_09675 PF02540 NAD synthase AYJ52_09690 PF00109 Beta-ketoacyl synthase, N-terminal domain AYJ52_09690 PF02801 Beta-ketoacyl synthase, C-terminal domain AYJ52_09700 PF00164 Ribosomal protein S12/S23 AYJ52_09705 PF00177 Ribosomal protein S7p/S5e AYJ52_09710 PF00679 Elongation factor G C-terminus AYJ52_09710 PF03144 Elongation factor Tu domain 2 AYJ52_09710 PF14492 Elongation Factor G, domain II AYJ52_09710 PF00009 Elongation factor Tu GTP binding domain AYJ52_09710 PF03764 Elongation factor G, domain IV AYJ52_09715 PF03144 Elongation factor Tu domain 2 AYJ52_09715 PF00009 Elongation factor Tu GTP binding domain AYJ52_09715 PF03143 Elongation factor Tu C-terminal domain AYJ52_09730 PF00583 Acetyltransferase (GNAT) family AYJ52_09735 PF04376 Arginine-tRNA-protein transferase, N terminus AYJ52_09735 PF04377 Arginine-tRNA-protein transferase, C terminus AYJ52_09740 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AYJ52_09745 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_09750 PF17854 FtsK alpha domain AYJ52_09750 PF01580 FtsK/SpoIIIE family AYJ52_09750 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AYJ52_09750 PF09397 Ftsk gamma domain AYJ52_09755 PF01810 LysE type translocator AYJ52_09765 PF03776 Septum formation topological specificity factor MinE AYJ52_09770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AYJ52_09775 PF03775 Septum formation inhibitor MinC, C-terminal domain AYJ52_09785 PF01553 Acyltransferase AYJ52_09790 PF13488 Glycine zipper AYJ52_09790 PF00691 OmpA family AYJ52_09795 PF13361 UvrD-like helicase C-terminal domain AYJ52_09795 PF00580 UvrD/REP helicase N-terminal domain AYJ52_09800 PF00692 dUTPase AYJ52_09805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYJ52_09805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYJ52_09805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYJ52_09805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYJ52_09810 PF00696 Amino acid kinase family AYJ52_09820 PF13230 Glutamine amidotransferases class-II AYJ52_09825 PF01814 Hemerythrin HHE cation binding domain AYJ52_09835 PF03658 RnfH family Ubiquitin AYJ52_09840 PF04355 SmpA / OmlA family AYJ52_09845 PF01475 Ferric uptake regulator family AYJ52_09850 PF00437 Type II/IV secretion system protein AYJ52_09855 PF00437 Type II/IV secretion system protein AYJ52_09860 PF01168 Alanine racemase, N-terminal domain AYJ52_09870 PF00149 Calcineurin-like phosphoesterase AYJ52_09870 PF12320 Type 5 capsule protein repressor C-terminal domain AYJ52_09890 PF01370 NAD dependent epimerase/dehydratase family AYJ52_09890 PF08338 Domain of unknown function (DUF1731) AYJ52_09895 PF01266 FAD dependent oxidoreductase AYJ52_09900 PF00490 Delta-aminolevulinic acid dehydratase AYJ52_09905 PF03061 Thioesterase superfamily AYJ52_09910 PF13533 Biotin-lipoyl like AYJ52_09915 PF07690 Major Facilitator Superfamily AYJ52_09930 PF07728 AAA domain (dynein-related subfamily) AYJ52_09930 PF12102 Domain of unknown function (DUF3578) AYJ52_09985 PF08281 Sigma-70, region 4 AYJ52_09985 PF04542 Sigma-70 region 2 AYJ52_09995 PF07715 TonB-dependent Receptor Plug Domain AYJ52_09995 PF00593 TonB dependent receptor AYJ52_10015 PF01126 Heme oxygenase AYJ52_10040 PF13520 Amino acid permease AYJ52_10045 PF02574 Homocysteine S-methyltransferase AYJ52_10055 PF06039 Malate:quinone oxidoreductase (Mqo) AYJ52_10060 PF00732 GMC oxidoreductase AYJ52_10060 PF05199 GMC oxidoreductase AYJ52_10065 PF00171 Aldehyde dehydrogenase family AYJ52_10070 PF00440 Bacterial regulatory proteins, tetR family AYJ52_10070 PF13977 BetI-type transcriptional repressor, C-terminal AYJ52_10075 PF02028 BCCT, betaine/carnitine/choline family transporter AYJ52_10080 PF02028 BCCT, betaine/carnitine/choline family transporter AYJ52_10090 PF03061 Thioesterase superfamily AYJ52_10100 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYJ52_10100 PF07683 Cobalamin synthesis protein cobW C-terminal domain AYJ52_10105 PF00375 Sodium:dicarboxylate symporter family AYJ52_10110 PF07152 YaeQ protein AYJ52_10115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYJ52_10120 PF13936 Helix-turn-helix domain AYJ52_10120 PF00665 Integrase core domain AYJ52_10125 PF14883 Hypothetical glycosyl hydrolase family 13 AYJ52_10125 PF01522 Polysaccharide deacetylase AYJ52_10130 PF00535 Glycosyl transferase family 2 AYJ52_10140 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_10155 PF09339 IclR helix-turn-helix domain AYJ52_10155 PF01614 Bacterial transcriptional regulator AYJ52_10160 PF00355 Rieske [2Fe-2S] domain AYJ52_10170 PF00355 Rieske [2Fe-2S] domain AYJ52_10180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYJ52_10185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_10185 PF14759 Reductase C-terminal AYJ52_10190 PF07690 Major Facilitator Superfamily AYJ52_10200 PF12697 Alpha/beta hydrolase family AYJ52_10210 PF01958 Domain of unknown function DUF108 AYJ52_10210 PF03447 Homoserine dehydrogenase, NAD binding domain AYJ52_10215 PF00171 Aldehyde dehydrogenase family AYJ52_10220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYJ52_10220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYJ52_10220 PF00205 Thiamine pyrophosphate enzyme, central domain AYJ52_10230 PF07690 Major Facilitator Superfamily AYJ52_10235 PF01327 Polypeptide deformylase AYJ52_10240 PF04960 Glutaminase AYJ52_10245 PF12833 Helix-turn-helix domain AYJ52_10245 PF02311 AraC-like ligand binding domain AYJ52_10250 PF07690 Major Facilitator Superfamily AYJ52_10255 PF01263 Aldose 1-epimerase AYJ52_10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_10265 PF03466 LysR substrate binding domain AYJ52_10275 PF07690 Major Facilitator Superfamily AYJ52_10280 PF00456 Transketolase, thiamine diphosphate binding domain AYJ52_10285 PF02779 Transketolase, pyrimidine binding domain AYJ52_10285 PF02780 Transketolase, C-terminal domain AYJ52_10295 PF02574 Homocysteine S-methyltransferase AYJ52_10295 PF00809 Pterin binding enzyme AYJ52_10295 PF02965 Vitamin B12 dependent methionine synthase, activation domain AYJ52_10295 PF02607 B12 binding domain AYJ52_10295 PF02310 B12 binding domain AYJ52_10300 PF01384 Phosphate transporter family AYJ52_10305 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_10315 PF03781 Sulfatase-modifying factor enzyme 1 AYJ52_10320 PF00884 Sulfatase AYJ52_10330 PF01106 NifU-like domain AYJ52_10330 PF01521 Iron-sulphur cluster biosynthesis AYJ52_10335 PF00593 TonB dependent receptor AYJ52_10335 PF07715 TonB-dependent Receptor Plug Domain AYJ52_10345 PF00561 alpha/beta hydrolase fold AYJ52_10350 PF00484 Carbonic anhydrase AYJ52_10355 PF13472 GDSL-like Lipase/Acylhydrolase family AYJ52_10360 PF00005 ABC transporter AYJ52_10370 PF01694 Rhomboid family AYJ52_10375 PF00912 Transglycosylase AYJ52_10380 PF02503 Polyphosphate kinase middle domain AYJ52_10380 PF13090 Polyphosphate kinase C-terminal domain 2 AYJ52_10380 PF17941 Polyphosphate kinase C-terminal domain 1 AYJ52_10380 PF13089 Polyphosphate kinase N-terminal domain AYJ52_10390 PF03466 LysR substrate binding domain AYJ52_10390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_10395 PF00561 alpha/beta hydrolase fold AYJ52_10400 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_10400 PF18113 Rubredoxin binding C-terminal domain AYJ52_10405 PF00301 Rubredoxin AYJ52_10420 PF00152 tRNA synthetases class II (D, K and N) AYJ52_10420 PF01336 OB-fold nucleic acid binding domain AYJ52_10425 PF14052 Capsule assembly protein Wzi AYJ52_10430 PF01507 Phosphoadenosine phosphosulfate reductase family AYJ52_10435 PF00009 Elongation factor Tu GTP binding domain AYJ52_10450 PF03600 Citrate transporter AYJ52_10455 PF01595 Cyclin M transmembrane N-terminal domain AYJ52_10455 PF00571 CBS domain AYJ52_10455 PF03471 Transporter associated domain AYJ52_10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_10460 PF03466 LysR substrate binding domain AYJ52_10465 PF00463 Isocitrate lyase family AYJ52_10470 PF04170 NlpE N-terminal domain AYJ52_10470 PF17185 NlpE C-terminal OB domain AYJ52_10480 PF01774 UreD urease accessory protein AYJ52_10485 PF00547 Urease, gamma subunit AYJ52_10490 PF00699 Urease beta subunit AYJ52_10495 PF00449 Urease alpha-subunit, N-terminal domain AYJ52_10495 PF01979 Amidohydrolase family AYJ52_10500 PF05194 UreE urease accessory protein, C-terminal domain AYJ52_10500 PF02814 UreE urease accessory protein, N-terminal domain AYJ52_10505 PF01730 UreF AYJ52_10510 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYJ52_10525 PF00905 Penicillin binding protein transpeptidase domain AYJ52_10525 PF03717 Penicillin-binding Protein dimerisation domain AYJ52_10540 PF05191 Adenylate kinase, active site lid AYJ52_10545 PF00633 Helix-hairpin-helix motif AYJ52_10545 PF10576 Iron-sulfur binding domain of endonuclease III AYJ52_10545 PF00730 HhH-GPD superfamily base excision DNA repair protein AYJ52_10550 PF04060 Putative Fe-S cluster AYJ52_10555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYJ52_10555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AYJ52_10565 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AYJ52_10570 PF02590 Predicted SPOUT methyltransferase AYJ52_10575 PF02190 ATP-dependent protease La (LON) substrate-binding domain AYJ52_10575 PF05362 Lon protease (S16) C-terminal proteolytic domain AYJ52_10575 PF00004 ATPase family associated with various cellular activities (AAA) AYJ52_10580 PF01812 5-formyltetrahydrofolate cyclo-ligase family AYJ52_10615 PF00557 Metallopeptidase family M24 AYJ52_10615 PF05195 Aminopeptidase P, N-terminal domain AYJ52_10620 PF01494 FAD binding domain AYJ52_10625 PF01494 FAD binding domain AYJ52_10635 PF13411 MerR HTH family regulatory protein AYJ52_10645 PF01810 LysE type translocator AYJ52_10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_10650 PF03466 LysR substrate binding domain AYJ52_10660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYJ52_10665 PF02021 Uncharacterised protein family UPF0102 AYJ52_10670 PF04972 BON domain AYJ52_10680 PF00293 NUDIX domain AYJ52_10680 PF09297 NADH pyrophosphatase zinc ribbon domain AYJ52_10690 PF00929 Exonuclease AYJ52_10695 PF01476 LysM domain AYJ52_10695 PF01464 Transglycosylase SLT domain AYJ52_10700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYJ52_10705 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_10710 PF12911 N-terminal TM domain of oligopeptide transport permease C AYJ52_10710 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_10715 PF00005 ABC transporter AYJ52_10715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYJ52_10720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_10720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYJ52_10730 PF00593 TonB dependent receptor AYJ52_10730 PF07715 TonB-dependent Receptor Plug Domain AYJ52_10750 PF00929 Exonuclease AYJ52_10755 PF01979 Amidohydrolase family AYJ52_10760 PF00563 EAL domain AYJ52_10760 PF01590 GAF domain AYJ52_10760 PF00990 Diguanylate cyclase, GGDEF domain AYJ52_10760 PF00360 Phytochrome region AYJ52_10765 PF00764 Arginosuccinate synthase AYJ52_10770 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_10770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYJ52_10790 PF13340 Putative transposase of IS4/5 family (DUF4096) AYJ52_10805 PF05987 Bacterial protein of unknown function (DUF898) AYJ52_10815 PF13276 HTH-like domain AYJ52_10815 PF13333 Integrase core domain AYJ52_10815 PF00665 Integrase core domain AYJ52_10835 PF00324 Amino acid permease AYJ52_10840 PF01266 FAD dependent oxidoreductase AYJ52_10845 PF00324 Amino acid permease AYJ52_10855 PF00392 Bacterial regulatory proteins, gntR family AYJ52_10855 PF07729 FCD domain AYJ52_10865 PF00171 Aldehyde dehydrogenase family AYJ52_10875 PF00202 Aminotransferase class-III AYJ52_10880 PF04958 Arginine N-succinyltransferase beta subunit AYJ52_10885 PF00324 Amino acid permease AYJ52_10890 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AYJ52_10890 PF17287 POTRA domain AYJ52_10890 PF08479 POTRA domain, ShlB-type AYJ52_10900 PF00665 Integrase core domain AYJ52_10900 PF13276 HTH-like domain AYJ52_10900 PF13333 Integrase core domain AYJ52_10905 PF01527 Transposase AYJ52_10920 PF00171 Aldehyde dehydrogenase family AYJ52_10925 PF12833 Helix-turn-helix domain AYJ52_10925 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AYJ52_10930 PF00892 EamA-like transporter family AYJ52_10935 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AYJ52_10935 PF08666 SAF domain AYJ52_10940 PF07690 Major Facilitator Superfamily AYJ52_10945 PF13378 Enolase C-terminal domain-like AYJ52_10950 PF00701 Dihydrodipicolinate synthetase family AYJ52_10955 PF00171 Aldehyde dehydrogenase family AYJ52_10960 PF00392 Bacterial regulatory proteins, gntR family AYJ52_10960 PF07729 FCD domain AYJ52_10965 PF07519 Tannase and feruloyl esterase AYJ52_10980 PF03573 outer membrane porin, OprD family AYJ52_10985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_10985 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_10985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_10995 PF00171 Aldehyde dehydrogenase family AYJ52_11000 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_11005 PF07690 Major Facilitator Superfamily AYJ52_11020 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_11020 PF00175 Oxidoreductase NAD-binding domain AYJ52_11025 PF00355 Rieske [2Fe-2S] domain AYJ52_11035 PF03781 Sulfatase-modifying factor enzyme 1 AYJ52_11040 PF00884 Sulfatase AYJ52_11050 PF03573 outer membrane porin, OprD family AYJ52_11055 PF18381 YcaO cyclodehydratase C-terminal domain AYJ52_11055 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AYJ52_11060 PF05199 GMC oxidoreductase AYJ52_11065 PF07859 alpha/beta hydrolase fold AYJ52_11070 PF00106 short chain dehydrogenase AYJ52_11075 PF00743 Flavin-binding monooxygenase-like AYJ52_11080 PF12833 Helix-turn-helix domain AYJ52_11080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AYJ52_11085 PF04072 Leucine carboxyl methyltransferase AYJ52_11090 PF00743 Flavin-binding monooxygenase-like AYJ52_11095 PF00106 short chain dehydrogenase AYJ52_11105 PF17932 Tetracyclin repressor-like, C-terminal domain AYJ52_11105 PF00440 Bacterial regulatory proteins, tetR family AYJ52_11110 PF02678 Pirin AYJ52_11110 PF17954 Quercetinase C-terminal cupin domain AYJ52_11120 PF00860 Permease family AYJ52_11125 PF00962 Adenosine/AMP deaminase AYJ52_11130 PF01292 Prokaryotic cytochrome b561 AYJ52_11140 PF01351 Ribonuclease HII AYJ52_11145 PF02599 Global regulator protein family AYJ52_11150 PF13840 ACT domain AYJ52_11150 PF00696 Amino acid kinase family AYJ52_11150 PF01842 ACT domain AYJ52_11155 PF02272 DHHA1 domain AYJ52_11155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYJ52_11155 PF01411 tRNA synthetases class II (A) AYJ52_11160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYJ52_11160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYJ52_11170 PF13393 Histidyl-tRNA synthetase AYJ52_11175 PF00709 Adenylosuccinate synthetase AYJ52_11190 PF00248 Aldo/keto reductase family AYJ52_11195 PF13545 Crp-like helix-turn-helix domain AYJ52_11195 PF00027 Cyclic nucleotide-binding domain AYJ52_11200 PF02566 OsmC-like protein AYJ52_11215 PF10431 C-terminal, D2-small domain, of ClpB protein AYJ52_11215 PF02861 Clp amino terminal domain, pathogenicity island component AYJ52_11215 PF17871 AAA lid domain AYJ52_11215 PF07724 AAA domain (Cdc48 subfamily) AYJ52_11215 PF00004 ATPase family associated with various cellular activities (AAA) AYJ52_11230 PF02926 THUMP domain AYJ52_11230 PF01170 Putative RNA methylase family UPF0020 AYJ52_11230 PF10672 S-adenosylmethionine-dependent methyltransferase AYJ52_11240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYJ52_11240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYJ52_11245 PF01979 Amidohydrolase family AYJ52_11250 PF13488 Glycine zipper AYJ52_11250 PF00691 OmpA family AYJ52_11260 PF00043 Glutathione S-transferase, C-terminal domain AYJ52_11260 PF13417 Glutathione S-transferase, N-terminal domain AYJ52_11270 PF02390 Putative methyltransferase AYJ52_11280 PF02798 Glutathione S-transferase, N-terminal domain AYJ52_11280 PF00043 Glutathione S-transferase, C-terminal domain AYJ52_11290 PF13192 Thioredoxin domain AYJ52_11290 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_11310 PF00578 AhpC/TSA family AYJ52_11310 PF10417 C-terminal domain of 1-Cys peroxiredoxin AYJ52_11315 PF11898 Domain of unknown function (DUF3418) AYJ52_11315 PF00271 Helicase conserved C-terminal domain AYJ52_11315 PF00270 DEAD/DEAH box helicase AYJ52_11315 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AYJ52_11315 PF04408 Helicase associated domain (HA2) AYJ52_11320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AYJ52_11320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AYJ52_11330 PF07690 Major Facilitator Superfamily AYJ52_11335 PF03594 Benzoate membrane transport protein AYJ52_11340 PF00106 short chain dehydrogenase AYJ52_11345 PF00970 Oxidoreductase FAD-binding domain AYJ52_11345 PF00175 Oxidoreductase NAD-binding domain AYJ52_11345 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_11350 PF00866 Ring hydroxylating beta subunit AYJ52_11355 PF00355 Rieske [2Fe-2S] domain AYJ52_11355 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYJ52_11360 PF03466 LysR substrate binding domain AYJ52_11360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_11370 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_11370 PF00175 Oxidoreductase NAD-binding domain AYJ52_11370 PF00970 Oxidoreductase FAD-binding domain AYJ52_11380 PF02332 Methane/Phenol/Toluene Hydroxylase AYJ52_11380 PF04945 YHS domain AYJ52_11385 PF02406 MmoB/DmpM family AYJ52_11390 PF02332 Methane/Phenol/Toluene Hydroxylase AYJ52_11395 PF06099 Phenol hydroxylase subunit AYJ52_11400 PF02830 V4R domain AYJ52_11400 PF02954 Bacterial regulatory protein, Fis family AYJ52_11400 PF06505 Activator of aromatic catabolism AYJ52_11400 PF00158 Sigma-54 interaction domain AYJ52_11410 PF00403 Heavy-metal-associated domain AYJ52_11415 PF00376 MerR family regulatory protein AYJ52_11415 PF09278 MerR, DNA binding AYJ52_11450 PF13742 OB-fold nucleic acid binding domain AYJ52_11450 PF02601 Exonuclease VII, large subunit AYJ52_11485 PF01810 LysE type translocator AYJ52_11490 PF03279 Bacterial lipid A biosynthesis acyltransferase AYJ52_11495 PF00313 'Cold-shock' DNA-binding domain AYJ52_11505 PF03807 NADP oxidoreductase coenzyme F420-dependent AYJ52_11505 PF14748 Pyrroline-5-carboxylate reductase dimerisation AYJ52_11510 PF01037 Lrp/AsnC ligand binding domain AYJ52_11515 PF13419 Haloacid dehalogenase-like hydrolase AYJ52_11520 PF08241 Methyltransferase domain AYJ52_11530 PF00440 Bacterial regulatory proteins, tetR family AYJ52_11570 PF00924 Mechanosensitive ion channel AYJ52_11575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYJ52_11575 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_11580 PF01593 Flavin containing amine oxidoreductase AYJ52_11590 PF07690 Major Facilitator Superfamily AYJ52_11595 PF01638 HxlR-like helix-turn-helix AYJ52_11625 PF14864 Alkyl sulfatase C-terminal AYJ52_11625 PF00753 Metallo-beta-lactamase superfamily AYJ52_11625 PF14863 Alkyl sulfatase dimerisation AYJ52_11630 PF00665 Integrase core domain AYJ52_11630 PF13936 Helix-turn-helix domain AYJ52_11645 PF09190 DALR domain AYJ52_11645 PF01406 tRNA synthetases class I (C) catalytic domain AYJ52_11650 PF00571 CBS domain AYJ52_11650 PF01380 SIS domain AYJ52_11665 PF03968 OstA-like protein AYJ52_11670 PF00005 ABC transporter AYJ52_11670 PF12399 Branched-chain amino acid ATP-binding cassette transporter AYJ52_11675 PF02321 Outer membrane efflux protein AYJ52_11680 PF00005 ABC transporter AYJ52_11680 PF03412 Peptidase C39 family AYJ52_11680 PF00664 ABC transporter transmembrane region AYJ52_11685 PF13533 Biotin-lipoyl like AYJ52_11695 PF00665 Integrase core domain AYJ52_11695 PF13276 HTH-like domain AYJ52_11695 PF13333 Integrase core domain AYJ52_11700 PF01205 Uncharacterized protein family UPF0029 AYJ52_11705 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_11715 PF01596 O-methyltransferase AYJ52_11725 PF11953 Domain of unknown function (DUF3470) AYJ52_11725 PF00037 4Fe-4S binding domain AYJ52_11735 PF05188 MutS domain II AYJ52_11735 PF00488 MutS domain V AYJ52_11735 PF01624 MutS domain I AYJ52_11735 PF05192 MutS domain III AYJ52_11735 PF05190 MutS family domain IV AYJ52_11740 PF00202 Aminotransferase class-III AYJ52_11745 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AYJ52_11745 PF12833 Helix-turn-helix domain AYJ52_11755 PF01636 Phosphotransferase enzyme family AYJ52_11760 PF13520 Amino acid permease AYJ52_11765 PF01037 Lrp/AsnC ligand binding domain AYJ52_11770 PF00892 EamA-like transporter family AYJ52_11795 PF00313 'Cold-shock' DNA-binding domain AYJ52_11805 PF00665 Integrase core domain AYJ52_11805 PF13276 HTH-like domain AYJ52_11805 PF13333 Integrase core domain AYJ52_11815 PF01527 Transposase AYJ52_11820 PF00665 Integrase core domain AYJ52_11820 PF13276 HTH-like domain AYJ52_11820 PF13333 Integrase core domain AYJ52_11825 PF01527 Transposase AYJ52_11830 PF13276 HTH-like domain AYJ52_11830 PF13333 Integrase core domain AYJ52_11830 PF00665 Integrase core domain AYJ52_11845 PF00199 Catalase AYJ52_11850 PF01292 Prokaryotic cytochrome b561 AYJ52_11855 PF07690 Major Facilitator Superfamily AYJ52_11865 PF13936 Helix-turn-helix domain AYJ52_11865 PF00665 Integrase core domain AYJ52_11885 PF00293 NUDIX domain AYJ52_11895 PF13276 HTH-like domain AYJ52_11895 PF00665 Integrase core domain AYJ52_11895 PF13333 Integrase core domain AYJ52_11910 PF00665 Integrase core domain AYJ52_11910 PF13276 HTH-like domain AYJ52_11910 PF13333 Integrase core domain AYJ52_11915 PF01527 Transposase AYJ52_11920 PF00665 Integrase core domain AYJ52_11920 PF13276 HTH-like domain AYJ52_11920 PF13333 Integrase core domain AYJ52_11940 PF00892 EamA-like transporter family AYJ52_11945 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYJ52_11945 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYJ52_11950 PF08240 Alcohol dehydrogenase GroES-like domain AYJ52_11950 PF13823 Alcohol dehydrogenase GroES-associated AYJ52_11950 PF00107 Zinc-binding dehydrogenase AYJ52_11965 PF02785 Biotin carboxylase C-terminal domain AYJ52_11965 PF00289 Biotin carboxylase, N-terminal domain AYJ52_11965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYJ52_11970 PF02525 Flavodoxin-like fold AYJ52_11975 PF01638 HxlR-like helix-turn-helix AYJ52_11980 PF08753 NikR C terminal nickel binding domain AYJ52_11980 PF01402 Ribbon-helix-helix protein, copG family AYJ52_11985 PF01425 Amidase AYJ52_11990 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYJ52_11995 PF00005 ABC transporter AYJ52_12025 PF00665 Integrase core domain AYJ52_12025 PF13936 Helix-turn-helix domain AYJ52_12055 PF00691 OmpA family AYJ52_12055 PF18393 MotY N-terminal domain AYJ52_12065 PF07724 AAA domain (Cdc48 subfamily) AYJ52_12065 PF17871 AAA lid domain AYJ52_12065 PF10431 C-terminal, D2-small domain, of ClpB protein AYJ52_12065 PF00004 ATPase family associated with various cellular activities (AAA) AYJ52_12095 PF03466 LysR substrate binding domain AYJ52_12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12100 PF12796 Ankyrin repeats (3 copies) AYJ52_12105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYJ52_12110 PF07690 Major Facilitator Superfamily AYJ52_12125 PF00155 Aminotransferase class I and II AYJ52_12125 PF00392 Bacterial regulatory proteins, gntR family AYJ52_12130 PF02677 Epoxyqueuosine reductase QueH AYJ52_12140 PF00376 MerR family regulatory protein AYJ52_12140 PF09278 MerR, DNA binding AYJ52_12155 PF03313 Serine dehydratase alpha chain AYJ52_12155 PF03315 Serine dehydratase beta chain AYJ52_12160 PF00171 Aldehyde dehydrogenase family AYJ52_12160 PF01575 MaoC like domain AYJ52_12165 PF05138 Phenylacetic acid catabolic protein AYJ52_12170 PF06243 Phenylacetic acid degradation B AYJ52_12175 PF05138 Phenylacetic acid catabolic protein AYJ52_12180 PF01883 Iron-sulfur cluster assembly protein AYJ52_12185 PF00970 Oxidoreductase FAD-binding domain AYJ52_12185 PF00175 Oxidoreductase NAD-binding domain AYJ52_12185 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_12190 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_12195 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_12200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYJ52_12200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYJ52_12200 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AYJ52_12205 PF02803 Thiolase, C-terminal domain AYJ52_12205 PF00108 Thiolase, N-terminal domain AYJ52_12210 PF00501 AMP-binding enzyme AYJ52_12210 PF14535 AMP-binding enzyme C-terminal domain AYJ52_12215 PF07848 PaaX-like protein AYJ52_12215 PF08223 PaaX-like protein C-terminal domain AYJ52_12220 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_12225 PF03061 Thioesterase superfamily AYJ52_12240 PF00440 Bacterial regulatory proteins, tetR family AYJ52_12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12245 PF03466 LysR substrate binding domain AYJ52_12250 PF02525 Flavodoxin-like fold AYJ52_12255 PF01614 Bacterial transcriptional regulator AYJ52_12255 PF09339 IclR helix-turn-helix domain AYJ52_12260 PF01494 FAD binding domain AYJ52_12265 PF01168 Alanine racemase, N-terminal domain AYJ52_12265 PF00842 Alanine racemase, C-terminal domain AYJ52_12270 PF07702 UTRA domain AYJ52_12270 PF00392 Bacterial regulatory proteins, gntR family AYJ52_12280 PF08402 TOBE domain AYJ52_12280 PF00005 ABC transporter AYJ52_12285 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_12290 PF01266 FAD dependent oxidoreductase AYJ52_12295 PF00266 Aminotransferase class-V AYJ52_12300 PF13419 Haloacid dehalogenase-like hydrolase AYJ52_12305 PF07690 Major Facilitator Superfamily AYJ52_12310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_12310 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_12310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_12315 PF02515 CoA-transferase family III AYJ52_12320 PF09339 IclR helix-turn-helix domain AYJ52_12325 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_12330 PF03060 Nitronate monooxygenase AYJ52_12335 PF07690 Major Facilitator Superfamily AYJ52_12340 PF09339 IclR helix-turn-helix domain AYJ52_12345 PF02803 Thiolase, C-terminal domain AYJ52_12345 PF00108 Thiolase, N-terminal domain AYJ52_12350 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYJ52_12350 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AYJ52_12350 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYJ52_12360 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_12365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_12365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_12365 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_12370 PF07690 Major Facilitator Superfamily AYJ52_12375 PF01144 Coenzyme A transferase AYJ52_12380 PF01144 Coenzyme A transferase AYJ52_12390 PF07690 Major Facilitator Superfamily AYJ52_12400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_12400 PF12806 Acetyl-CoA dehydrogenase C-terminal like AYJ52_12400 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_12400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_12415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12415 PF03466 LysR substrate binding domain AYJ52_12420 PF00682 HMGL-like AYJ52_12425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYJ52_12425 PF02785 Biotin carboxylase C-terminal domain AYJ52_12425 PF00289 Biotin carboxylase, N-terminal domain AYJ52_12425 PF00364 Biotin-requiring enzyme AYJ52_12430 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_12435 PF01039 Carboxyl transferase domain AYJ52_12440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_12440 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_12440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_12445 PF00440 Bacterial regulatory proteins, tetR family AYJ52_12450 PF00501 AMP-binding enzyme AYJ52_12450 PF13193 AMP-binding enzyme C-terminal domain AYJ52_12465 PF07690 Major Facilitator Superfamily AYJ52_12475 PF03466 LysR substrate binding domain AYJ52_12475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12505 PF00665 Integrase core domain AYJ52_12505 PF13936 Helix-turn-helix domain AYJ52_12520 PF00199 Catalase AYJ52_12520 PF06628 Catalase-related immune-responsive AYJ52_12520 PF18011 C-terminal domain found in long catalases AYJ52_12545 PF00717 Peptidase S24-like AYJ52_12555 PF13404 AsnC-type helix-turn-helix domain AYJ52_12555 PF01037 Lrp/AsnC ligand binding domain AYJ52_12565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_12565 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_12565 PF09308 LuxQ, periplasmic AYJ52_12565 PF00072 Response regulator receiver domain AYJ52_12570 PF00072 Response regulator receiver domain AYJ52_12580 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_12585 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_12590 PF00005 ABC transporter AYJ52_12595 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYJ52_12600 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYJ52_12605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12605 PF03466 LysR substrate binding domain AYJ52_12610 PF01810 LysE type translocator AYJ52_12615 PF00266 Aminotransferase class-V AYJ52_12625 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_12630 PF00581 Rhodanese-like domain AYJ52_12640 PF03466 LysR substrate binding domain AYJ52_12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12645 PF02798 Glutathione S-transferase, N-terminal domain AYJ52_12650 PF02798 Glutathione S-transferase, N-terminal domain AYJ52_12650 PF14834 Glutathione S-transferase, C-terminal domain AYJ52_12655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12655 PF03466 LysR substrate binding domain AYJ52_12660 PF03788 LrgA family AYJ52_12665 PF04172 LrgB-like family AYJ52_12670 PF00392 Bacterial regulatory proteins, gntR family AYJ52_12670 PF00155 Aminotransferase class I and II AYJ52_12685 PF07690 Major Facilitator Superfamily AYJ52_12695 PF03466 LysR substrate binding domain AYJ52_12695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12700 PF16957 Malonate decarboxylase, alpha subunit, transporter AYJ52_12705 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AYJ52_12710 PF06857 Malonate decarboxylase delta subunit (MdcD) AYJ52_12715 PF01039 Carboxyl transferase domain AYJ52_12725 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AYJ52_12730 PF00698 Acyl transferase domain AYJ52_12745 PF03466 LysR substrate binding domain AYJ52_12745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12750 PF00392 Bacterial regulatory proteins, gntR family AYJ52_12750 PF00155 Aminotransferase class I and II AYJ52_12755 PF02322 Cytochrome bd terminal oxidase subunit II AYJ52_12760 PF01654 Cytochrome bd terminal oxidase subunit I AYJ52_12780 PF13936 Helix-turn-helix domain AYJ52_12780 PF00665 Integrase core domain AYJ52_12785 PF00083 Sugar (and other) transporter AYJ52_12795 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AYJ52_12800 PF00005 ABC transporter AYJ52_12805 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_12810 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AYJ52_12815 PF01177 Asp/Glu/Hydantoin racemase AYJ52_12820 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AYJ52_12830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12830 PF03466 LysR substrate binding domain AYJ52_12840 PF01979 Amidohydrolase family AYJ52_12840 PF13382 Adenine deaminase C-terminal domain AYJ52_12845 PF03960 ArsC family AYJ52_12850 PF01022 Bacterial regulatory protein, arsR family AYJ52_12860 PF01758 Sodium Bile acid symporter family AYJ52_12865 PF03358 NADPH-dependent FMN reductase AYJ52_12870 PF03466 LysR substrate binding domain AYJ52_12870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_12885 PF13192 Thioredoxin domain AYJ52_12885 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_12900 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_12905 PF00588 SpoU rRNA Methylase family AYJ52_12910 PF07733 Bacterial DNA polymerase III alpha NTPase domain AYJ52_12910 PF14579 Helix-hairpin-helix motif AYJ52_12910 PF02811 PHP domain AYJ52_12910 PF01336 OB-fold nucleic acid binding domain AYJ52_12910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AYJ52_12915 PF00710 Asparaginase, N-terminal AYJ52_12915 PF17763 Glutaminase/Asparaginase C-terminal domain AYJ52_12920 PF00375 Sodium:dicarboxylate symporter family AYJ52_12925 PF00155 Aminotransferase class I and II AYJ52_12930 PF01641 SelR domain AYJ52_12935 PF00255 Glutathione peroxidase AYJ52_12940 PF12833 Helix-turn-helix domain AYJ52_12940 PF02311 AraC-like ligand binding domain AYJ52_12950 PF00155 Aminotransferase class I and II AYJ52_12955 PF08335 GlnD PII-uridylyltransferase AYJ52_12955 PF01966 HD domain AYJ52_12955 PF01909 Nucleotidyltransferase domain AYJ52_12960 PF02222 ATP-grasp domain AYJ52_12970 PF05437 Branched-chain amino acid transport protein (AzlD) AYJ52_12975 PF03591 AzlC protein AYJ52_13005 PF13333 Integrase core domain AYJ52_13005 PF00665 Integrase core domain AYJ52_13005 PF13276 HTH-like domain AYJ52_13010 PF06071 Protein of unknown function (DUF933) AYJ52_13010 PF01926 50S ribosome-binding GTPase AYJ52_13015 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_13020 PF09383 NIL domain AYJ52_13020 PF00005 ABC transporter AYJ52_13025 PF03180 NLPA lipoprotein AYJ52_13030 PF03180 NLPA lipoprotein AYJ52_13035 PF00296 Luciferase-like monooxygenase AYJ52_13045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_13045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_13060 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_13065 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_13070 PF00005 ABC transporter AYJ52_13080 PF01037 Lrp/AsnC ligand binding domain AYJ52_13085 PF01709 Transcriptional regulator AYJ52_13095 PF00440 Bacterial regulatory proteins, tetR family AYJ52_13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_13110 PF03466 LysR substrate binding domain AYJ52_13120 PF00665 Integrase core domain AYJ52_13120 PF13936 Helix-turn-helix domain AYJ52_13130 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AYJ52_13140 PF00892 EamA-like transporter family AYJ52_13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_13145 PF03466 LysR substrate binding domain AYJ52_13155 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AYJ52_13155 PF12833 Helix-turn-helix domain AYJ52_13165 PF00419 Fimbrial protein AYJ52_13170 PF00577 Outer membrane usher protein AYJ52_13170 PF13954 PapC N-terminal domain AYJ52_13170 PF13953 PapC C-terminal domain AYJ52_13175 PF02753 Pili assembly chaperone PapD, C-terminal domain AYJ52_13175 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AYJ52_13180 PF16970 Type-1 fimbrial protein, A AYJ52_13195 PF00665 Integrase core domain AYJ52_13195 PF13333 Integrase core domain AYJ52_13195 PF13276 HTH-like domain AYJ52_13205 PF04055 Radical SAM superfamily AYJ52_13205 PF06968 Biotin and Thiamin Synthesis associated domain AYJ52_13210 PF08331 Domain of unknown function (DUF1730) AYJ52_13215 PF03853 YjeF-related protein N-terminus AYJ52_13215 PF01256 Carbohydrate kinase AYJ52_13220 PF02075 Crossover junction endodeoxyribonuclease RuvC AYJ52_13235 PF00905 Penicillin binding protein transpeptidase domain AYJ52_13255 PF02773 S-adenosylmethionine synthetase, C-terminal domain AYJ52_13255 PF02772 S-adenosylmethionine synthetase, central domain AYJ52_13255 PF00438 S-adenosylmethionine synthetase, N-terminal domain AYJ52_13260 PF02779 Transketolase, pyrimidine binding domain AYJ52_13260 PF00456 Transketolase, thiamine diphosphate binding domain AYJ52_13260 PF02780 Transketolase, C-terminal domain AYJ52_13270 PF04264 YceI-like domain AYJ52_13280 PF09992 Phosphodiester glycosidase AYJ52_13290 PF05958 tRNA (Uracil-5-)-methyltransferase AYJ52_13295 PF04229 GrpB protein AYJ52_13300 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AYJ52_13300 PF01619 Proline dehydrogenase AYJ52_13300 PF00171 Aldehyde dehydrogenase family AYJ52_13300 PF14850 DNA-binding domain of Proline dehydrogenase AYJ52_13305 PF01037 Lrp/AsnC ligand binding domain AYJ52_13310 PF00474 Sodium:solute symporter family AYJ52_13315 PF02146 Sir2 family AYJ52_13320 PF01597 Glycine cleavage H-protein AYJ52_13325 PF12833 Helix-turn-helix domain AYJ52_13325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AYJ52_13335 PF00005 ABC transporter AYJ52_13335 PF00664 ABC transporter transmembrane region AYJ52_13340 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AYJ52_13345 PF06912 Protein of unknown function (DUF1275) AYJ52_13350 PF00375 Sodium:dicarboxylate symporter family AYJ52_13365 PF08007 Cupin superfamily protein AYJ52_13370 PF02545 Maf-like protein AYJ52_13380 PF00162 Phosphoglycerate kinase AYJ52_13390 PF01116 Fructose-bisphosphate aldolase class-II AYJ52_13395 PF00639 PPIC-type PPIASE domain AYJ52_13395 PF09312 SurA N-terminal domain AYJ52_13400 PF04453 LPS transport system D AYJ52_13400 PF03968 OstA-like protein AYJ52_13405 PF01636 Phosphotransferase enzyme family AYJ52_13410 PF00483 Nucleotidyl transferase AYJ52_13415 PF02527 rRNA small subunit methyltransferase G AYJ52_13420 PF13614 AAA domain AYJ52_13425 PF02195 ParB-like nuclease domain AYJ52_13425 PF17762 HTH domain found in ParB protein AYJ52_13430 PF01618 MotA/TolQ/ExbB proton channel family AYJ52_13440 PF00664 ABC transporter transmembrane region AYJ52_13440 PF00005 ABC transporter AYJ52_13445 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AYJ52_13450 PF02348 Cytidylyltransferase AYJ52_13455 PF09115 DNA polymerase III, delta subunit, C terminal AYJ52_13465 PF01026 TatD related DNase AYJ52_13480 PF02501 Type II secretion system (T2SS), protein I AYJ52_13480 PF07963 Prokaryotic N-terminal methylation motif AYJ52_13485 PF11612 Type II secretion system (T2SS), protein J AYJ52_13485 PF07963 Prokaryotic N-terminal methylation motif AYJ52_13490 PF03934 Type II secretion system (T2SS), protein K AYJ52_13500 PF03167 Uracil DNA glycosylase superfamily AYJ52_13510 PF14437 MafB19-like deaminase AYJ52_13520 PF02224 Cytidylate kinase AYJ52_13525 PF00575 S1 RNA binding domain AYJ52_13530 PF00216 Bacterial DNA-binding protein AYJ52_13540 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AYJ52_13545 PF03956 Lysine exporter LysO AYJ52_13550 PF00743 Flavin-binding monooxygenase-like AYJ52_13560 PF03969 AFG1-like ATPase AYJ52_13565 PF01274 Malate synthase AYJ52_13575 PF02472 Biopolymer transport protein ExbD/TolR AYJ52_13580 PF02472 Biopolymer transport protein ExbD/TolR AYJ52_13585 PF01618 MotA/TolQ/ExbB proton channel family AYJ52_13595 PF00593 TonB dependent receptor AYJ52_13595 PF07715 TonB-dependent Receptor Plug Domain AYJ52_13605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYJ52_13610 PF01432 Peptidase family M3 AYJ52_13615 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_13620 PF12911 N-terminal TM domain of oligopeptide transport permease C AYJ52_13620 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_13625 PF00005 ABC transporter AYJ52_13625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYJ52_13640 PF00459 Inositol monophosphatase family AYJ52_13650 PF01649 Ribosomal protein S20 AYJ52_13655 PF13460 NAD(P)H-binding AYJ52_13660 PF03737 Aldolase/RraA AYJ52_13680 PF02559 CarD-like/TRCF domain AYJ52_13680 PF00270 DEAD/DEAH box helicase AYJ52_13680 PF00271 Helicase conserved C-terminal domain AYJ52_13680 PF17757 UvrB interaction domain AYJ52_13680 PF03461 TRCF domain AYJ52_13690 PF00211 Adenylate and Guanylate cyclase catalytic domain AYJ52_13695 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_13700 PF00012 Hsp70 protein AYJ52_13705 PF07743 HSCB C-terminal oligomerisation domain AYJ52_13705 PF00226 DnaJ domain AYJ52_13710 PF01521 Iron-sulphur cluster biosynthesis AYJ52_13715 PF01592 NifU-like N terminal domain AYJ52_13720 PF00266 Aminotransferase class-V AYJ52_13725 PF02082 Transcriptional regulator AYJ52_13740 PF00216 Bacterial DNA-binding protein AYJ52_13745 PF00639 PPIC-type PPIASE domain AYJ52_13745 PF09312 SurA N-terminal domain AYJ52_13750 PF12852 Cupin AYJ52_13750 PF12833 Helix-turn-helix domain AYJ52_13755 PF00487 Fatty acid desaturase AYJ52_13760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_13760 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_13760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_13765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_13765 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_13765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_13770 PF03109 ABC1 family AYJ52_13780 PF04073 Aminoacyl-tRNA editing domain AYJ52_13785 PF00593 TonB dependent receptor AYJ52_13785 PF07715 TonB-dependent Receptor Plug Domain AYJ52_13790 PF13419 Haloacid dehalogenase-like hydrolase AYJ52_13800 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AYJ52_13805 PF02277 Phosphoribosyltransferase AYJ52_13810 PF00300 Histidine phosphatase superfamily (branch 1) AYJ52_13820 PF02654 Cobalamin-5-phosphate synthase AYJ52_13825 PF00793 DAHP synthetase I family AYJ52_13830 PF01925 Sulfite exporter TauE/SafE AYJ52_13850 PF07715 TonB-dependent Receptor Plug Domain AYJ52_13850 PF00593 TonB dependent receptor AYJ52_13855 PF02684 Lipid-A-disaccharide synthetase AYJ52_13880 PF01230 HIT domain AYJ52_13895 PF00561 alpha/beta hydrolase fold AYJ52_13900 PF01053 Cys/Met metabolism PLP-dependent enzyme AYJ52_13910 PF02575 YbaB/EbfC DNA-binding family AYJ52_13915 PF02132 RecR protein AYJ52_13915 PF13662 Toprim domain AYJ52_13920 PF01612 3'-5' exonuclease AYJ52_13920 PF00570 HRDC domain AYJ52_13925 PF02525 Flavodoxin-like fold AYJ52_13930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_13930 PF03466 LysR substrate binding domain AYJ52_13945 PF05166 YcgL domain AYJ52_13955 PF01434 Peptidase family M41 AYJ52_13955 PF17862 AAA+ lid domain AYJ52_13955 PF00004 ATPase family associated with various cellular activities (AAA) AYJ52_13965 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_13970 PF05175 Methyltransferase small domain AYJ52_13975 PF01264 Chorismate synthase AYJ52_13985 PF00990 Diguanylate cyclase, GGDEF domain AYJ52_13985 PF08448 PAS fold AYJ52_14000 PF04055 Radical SAM superfamily AYJ52_14005 PF00676 Dehydrogenase E1 component AYJ52_14010 PF02779 Transketolase, pyrimidine binding domain AYJ52_14010 PF02780 Transketolase, C-terminal domain AYJ52_14015 PF02817 e3 binding domain AYJ52_14015 PF00364 Biotin-requiring enzyme AYJ52_14015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYJ52_14020 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_14020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYJ52_14025 PF00106 short chain dehydrogenase AYJ52_14030 PF00107 Zinc-binding dehydrogenase AYJ52_14030 PF08240 Alcohol dehydrogenase GroES-like domain AYJ52_14035 PF01062 Bestrophin, RFP-TM, chloride channel AYJ52_14040 PF00158 Sigma-54 interaction domain AYJ52_14040 PF00072 Response regulator receiver domain AYJ52_14040 PF02954 Bacterial regulatory protein, Fis family AYJ52_14045 PF00753 Metallo-beta-lactamase superfamily AYJ52_14050 PF00753 Metallo-beta-lactamase superfamily AYJ52_14050 PF04273 Putative phosphatase (DUF442) AYJ52_14055 PF01925 Sulfite exporter TauE/SafE AYJ52_14070 PF06445 GyrI-like small molecule binding domain AYJ52_14070 PF12833 Helix-turn-helix domain AYJ52_14075 PF01638 HxlR-like helix-turn-helix AYJ52_14080 PF02525 Flavodoxin-like fold AYJ52_14090 PF00083 Sugar (and other) transporter AYJ52_14095 PF07715 TonB-dependent Receptor Plug Domain AYJ52_14095 PF00593 TonB dependent receptor AYJ52_14100 PF00206 Lyase AYJ52_14100 PF10415 Fumarase C C-terminus AYJ52_14115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14115 PF03466 LysR substrate binding domain AYJ52_14120 PF03466 LysR substrate binding domain AYJ52_14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14125 PF02803 Thiolase, C-terminal domain AYJ52_14125 PF00108 Thiolase, N-terminal domain AYJ52_14130 PF02667 Short chain fatty acid transporter AYJ52_14135 PF01144 Coenzyme A transferase AYJ52_14140 PF01144 Coenzyme A transferase AYJ52_14145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14145 PF03466 LysR substrate binding domain AYJ52_14185 PF12833 Helix-turn-helix domain AYJ52_14185 PF06719 AraC-type transcriptional regulator N-terminus AYJ52_14190 PF07690 Major Facilitator Superfamily AYJ52_14200 PF01738 Dienelactone hydrolase family AYJ52_14215 PF01613 Flavin reductase like domain AYJ52_14225 PF12833 Helix-turn-helix domain AYJ52_14225 PF14525 AraC-binding-like domain AYJ52_14230 PF00970 Oxidoreductase FAD-binding domain AYJ52_14230 PF00175 Oxidoreductase NAD-binding domain AYJ52_14230 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_14235 PF00866 Ring hydroxylating beta subunit AYJ52_14240 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYJ52_14240 PF00355 Rieske [2Fe-2S] domain AYJ52_14245 PF03459 TOBE domain AYJ52_14245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14255 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_14260 PF03459 TOBE domain AYJ52_14260 PF00005 ABC transporter AYJ52_14265 PF00106 short chain dehydrogenase AYJ52_14270 PF00550 Phosphopantetheine attachment site AYJ52_14270 PF00857 Isochorismatase family AYJ52_14295 PF12706 Beta-lactamase superfamily domain AYJ52_14300 PF03070 TENA/THI-4/PQQC family AYJ52_14305 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AYJ52_14310 PF04055 Radical SAM superfamily AYJ52_14310 PF13186 Iron-sulfur cluster-binding domain AYJ52_14315 PF01244 Membrane dipeptidase (Peptidase family M19) AYJ52_14325 PF00873 AcrB/AcrD/AcrF family AYJ52_14330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYJ52_14330 PF00529 HlyD membrane-fusion protein of T1SS AYJ52_14335 PF00072 Response regulator receiver domain AYJ52_14335 PF00486 Transcriptional regulatory protein, C terminal AYJ52_14340 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_14340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_14340 PF00672 HAMP domain AYJ52_14350 PF13091 PLD-like domain AYJ52_14365 PF13936 Helix-turn-helix domain AYJ52_14365 PF00665 Integrase core domain AYJ52_14375 PF00199 Catalase AYJ52_14385 PF08240 Alcohol dehydrogenase GroES-like domain AYJ52_14385 PF00107 Zinc-binding dehydrogenase AYJ52_14400 PF13954 PapC N-terminal domain AYJ52_14400 PF13953 PapC C-terminal domain AYJ52_14400 PF00577 Outer membrane usher protein AYJ52_14405 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AYJ52_14405 PF02753 Pili assembly chaperone PapD, C-terminal domain AYJ52_14410 PF16970 Type-1 fimbrial protein, A AYJ52_14420 PF13936 Helix-turn-helix domain AYJ52_14420 PF00665 Integrase core domain AYJ52_14485 PF00929 Exonuclease AYJ52_14485 PF01541 GIY-YIG catalytic domain AYJ52_14495 PF13333 Integrase core domain AYJ52_14495 PF00665 Integrase core domain AYJ52_14495 PF13276 HTH-like domain AYJ52_14525 PF13291 ACT domain AYJ52_14525 PF04607 Region found in RelA / SpoT proteins AYJ52_14525 PF02824 TGS domain AYJ52_14535 PF01975 Survival protein SurE AYJ52_14560 PF07690 Major Facilitator Superfamily AYJ52_14565 PF13533 Biotin-lipoyl like AYJ52_14580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AYJ52_14585 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AYJ52_14585 PF14572 Phosphoribosyl synthetase-associated domain AYJ52_14605 PF00005 ABC transporter AYJ52_14625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYJ52_14625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYJ52_14630 PF07690 Major Facilitator Superfamily AYJ52_14635 PF01370 NAD dependent epimerase/dehydratase family AYJ52_14640 PF03466 LysR substrate binding domain AYJ52_14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14650 PF00920 Dehydratase family AYJ52_14655 PF00171 Aldehyde dehydrogenase family AYJ52_14670 PF13533 Biotin-lipoyl like AYJ52_14680 PF07690 Major Facilitator Superfamily AYJ52_14685 PF01557 Fumarylacetoacetate (FAA) hydrolase family AYJ52_14690 PF13417 Glutathione S-transferase, N-terminal domain AYJ52_14695 PF01494 FAD binding domain AYJ52_14700 PF07883 Cupin domain AYJ52_14705 PF03466 LysR substrate binding domain AYJ52_14705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14710 PF00324 Amino acid permease AYJ52_14715 PF00171 Aldehyde dehydrogenase family AYJ52_14720 PF00202 Aminotransferase class-III AYJ52_14725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14725 PF03466 LysR substrate binding domain AYJ52_14735 PF04829 Pre-toxin domain with VENN motif AYJ52_14735 PF13018 Extended Signal Peptide of Type V secretion system AYJ52_14735 PF13332 Hemagglutinin repeat AYJ52_14735 PF05860 haemagglutination activity domain AYJ52_14740 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AYJ52_14740 PF17287 POTRA domain AYJ52_14740 PF08479 POTRA domain, ShlB-type AYJ52_14755 PF03737 Aldolase/RraA AYJ52_14760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYJ52_14760 PF01842 ACT domain AYJ52_14760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYJ52_14765 PF07690 Major Facilitator Superfamily AYJ52_14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14785 PF03466 LysR substrate binding domain AYJ52_14805 PF13936 Helix-turn-helix domain AYJ52_14805 PF00665 Integrase core domain AYJ52_14820 PF13360 PQQ-like domain AYJ52_14825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14825 PF03466 LysR substrate binding domain AYJ52_14830 PF02798 Glutathione S-transferase, N-terminal domain AYJ52_14830 PF00043 Glutathione S-transferase, C-terminal domain AYJ52_14835 PF07681 DoxX AYJ52_14840 PF02525 Flavodoxin-like fold AYJ52_14845 PF03466 LysR substrate binding domain AYJ52_14845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14865 PF13193 AMP-binding enzyme C-terminal domain AYJ52_14865 PF00501 AMP-binding enzyme AYJ52_14875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_14875 PF12806 Acetyl-CoA dehydrogenase C-terminal like AYJ52_14875 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_14875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_14880 PF01575 MaoC like domain AYJ52_14885 PF00106 short chain dehydrogenase AYJ52_14900 PF03466 LysR substrate binding domain AYJ52_14900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14905 PF08359 YsiA-like protein, C-terminal region AYJ52_14905 PF00440 Bacterial regulatory proteins, tetR family AYJ52_14910 PF12706 Beta-lactamase superfamily domain AYJ52_14920 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_14930 PF00376 MerR family regulatory protein AYJ52_14930 PF09278 MerR, DNA binding AYJ52_14935 PF00106 short chain dehydrogenase AYJ52_14940 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_14940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYJ52_14945 PF00561 alpha/beta hydrolase fold AYJ52_14955 PF00171 Aldehyde dehydrogenase family AYJ52_14965 PF07690 Major Facilitator Superfamily AYJ52_14970 PF00920 Dehydratase family AYJ52_14975 PF07729 FCD domain AYJ52_14975 PF00392 Bacterial regulatory proteins, gntR family AYJ52_14985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_14985 PF03466 LysR substrate binding domain AYJ52_14990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AYJ52_14990 PF13378 Enolase C-terminal domain-like AYJ52_14995 PF02426 Muconolactone delta-isomerase AYJ52_15000 PF00775 Dioxygenase AYJ52_15000 PF04444 Catechol dioxygenase N terminus AYJ52_15005 PF01144 Coenzyme A transferase AYJ52_15010 PF01144 Coenzyme A transferase AYJ52_15015 PF00108 Thiolase, N-terminal domain AYJ52_15015 PF02803 Thiolase, C-terminal domain AYJ52_15020 PF12146 Serine aminopeptidase, S33 AYJ52_15025 PF00171 Aldehyde dehydrogenase family AYJ52_15035 PF02728 Copper amine oxidase, N3 domain AYJ52_15035 PF02727 Copper amine oxidase, N2 domain AYJ52_15035 PF07833 Copper amine oxidase N-terminal domain AYJ52_15035 PF01179 Copper amine oxidase, enzyme domain AYJ52_15040 PF02311 AraC-like ligand binding domain AYJ52_15040 PF12833 Helix-turn-helix domain AYJ52_15045 PF01613 Flavin reductase like domain AYJ52_15050 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_15050 PF00175 Oxidoreductase NAD-binding domain AYJ52_15065 PF00355 Rieske [2Fe-2S] domain AYJ52_15065 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AYJ52_15080 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_15085 PF01425 Amidase AYJ52_15095 PF07690 Major Facilitator Superfamily AYJ52_15105 PF00106 short chain dehydrogenase AYJ52_15120 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_15120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_15120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_15125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_15125 PF03466 LysR substrate binding domain AYJ52_15130 PF01614 Bacterial transcriptional regulator AYJ52_15130 PF09339 IclR helix-turn-helix domain AYJ52_15135 PF00753 Metallo-beta-lactamase superfamily AYJ52_15145 PF04143 Sulphur transport AYJ52_15150 PF00665 Integrase core domain AYJ52_15150 PF13276 HTH-like domain AYJ52_15150 PF13333 Integrase core domain AYJ52_15165 PF13360 PQQ-like domain AYJ52_15165 PF01011 PQQ enzyme repeat AYJ52_15170 PF04966 Carbohydrate-selective porin, OprB family AYJ52_15175 PF05048 Periplasmic copper-binding protein (NosD) AYJ52_15180 PF01487 Type I 3-dehydroquinase AYJ52_15185 PF00775 Dioxygenase AYJ52_15190 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AYJ52_15190 PF00775 Dioxygenase AYJ52_15195 PF02627 Carboxymuconolactone decarboxylase family AYJ52_15200 PF07690 Major Facilitator Superfamily AYJ52_15205 PF00561 alpha/beta hydrolase fold AYJ52_15210 PF10397 Adenylosuccinate lyase C-terminus AYJ52_15210 PF00206 Lyase AYJ52_15215 PF02803 Thiolase, C-terminal domain AYJ52_15215 PF00108 Thiolase, N-terminal domain AYJ52_15220 PF01144 Coenzyme A transferase AYJ52_15225 PF01144 Coenzyme A transferase AYJ52_15230 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AYJ52_15235 PF04977 Septum formation initiator AYJ52_15240 PF13333 Integrase core domain AYJ52_15240 PF00665 Integrase core domain AYJ52_15240 PF13276 HTH-like domain AYJ52_15250 PF07715 TonB-dependent Receptor Plug Domain AYJ52_15250 PF00593 TonB dependent receptor AYJ52_15260 PF00665 Integrase core domain AYJ52_15260 PF13936 Helix-turn-helix domain AYJ52_15265 PF04239 Protein of unknown function (DUF421) AYJ52_15270 PF00113 Enolase, C-terminal TIM barrel domain AYJ52_15270 PF03952 Enolase, N-terminal domain AYJ52_15275 PF00793 DAHP synthetase I family AYJ52_15280 PF06418 CTP synthase N-terminus AYJ52_15280 PF00117 Glutamine amidotransferase class-I AYJ52_15310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYJ52_15310 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_15325 PF00793 DAHP synthetase I family AYJ52_15330 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AYJ52_15335 PF10431 C-terminal, D2-small domain, of ClpB protein AYJ52_15335 PF17871 AAA lid domain AYJ52_15335 PF07724 AAA domain (Cdc48 subfamily) AYJ52_15335 PF02861 Clp amino terminal domain, pathogenicity island component AYJ52_15335 PF00004 ATPase family associated with various cellular activities (AAA) AYJ52_15340 PF02617 ATP-dependent Clp protease adaptor protein ClpS AYJ52_15350 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYJ52_15350 PF02774 Semialdehyde dehydrogenase, dimerisation domain AYJ52_15365 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AYJ52_15370 PF00585 C-terminal regulatory domain of Threonine dehydratase AYJ52_15370 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_15375 PF02254 TrkA-N domain AYJ52_15375 PF02080 TrkA-C domain AYJ52_15380 PF02386 Cation transport protein AYJ52_15385 PF02253 Phospholipase A1 AYJ52_15390 PF05193 Peptidase M16 inactive domain AYJ52_15390 PF00675 Insulinase (Peptidase family M16) AYJ52_15390 PF08367 Peptidase M16C associated AYJ52_15395 PF00294 pfkB family carbohydrate kinase AYJ52_15405 PF07290 Protein of unknown function (DUF1449) AYJ52_15415 PF01654 Cytochrome bd terminal oxidase subunit I AYJ52_15420 PF02322 Cytochrome bd terminal oxidase subunit II AYJ52_15425 PF08173 Membrane bound YbgT-like protein AYJ52_15440 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AYJ52_15450 PF00448 SRP54-type protein, GTPase domain AYJ52_15450 PF02881 SRP54-type protein, helical bundle domain AYJ52_15475 PF00571 CBS domain AYJ52_15475 PF01380 SIS domain AYJ52_15480 PF00202 Aminotransferase class-III AYJ52_15485 PF00462 Glutaredoxin AYJ52_15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_15495 PF03466 LysR substrate binding domain AYJ52_15500 PF00557 Metallopeptidase family M24 AYJ52_15505 PF05525 Branched-chain amino acid transport protein AYJ52_15510 PF03928 Haem-degrading AYJ52_15530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYJ52_15530 PF05524 PEP-utilising enzyme, N-terminal AYJ52_15530 PF00391 PEP-utilising enzyme, mobile domain AYJ52_15530 PF02896 PEP-utilising enzyme, TIM barrel domain AYJ52_15530 PF00381 PTS HPr component phosphorylation site AYJ52_15535 PF00294 pfkB family carbohydrate kinase AYJ52_15540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYJ52_15540 PF02378 Phosphotransferase system, EIIC AYJ52_15555 PF00563 EAL domain AYJ52_15555 PF00990 Diguanylate cyclase, GGDEF domain AYJ52_15555 PF03707 Bacterial signalling protein N terminal repeat AYJ52_15565 PF07995 Glucose / Sorbosone dehydrogenase AYJ52_15575 PF00916 Sulfate permease family AYJ52_15575 PF01740 STAS domain AYJ52_15580 PF05922 Peptidase inhibitor I9 AYJ52_15580 PF00082 Subtilase family AYJ52_15595 PF00324 Amino acid permease AYJ52_15600 PF00266 Aminotransferase class-V AYJ52_15605 PF01037 Lrp/AsnC ligand binding domain AYJ52_15620 PF13419 Haloacid dehalogenase-like hydrolase AYJ52_15625 PF01479 S4 domain AYJ52_15630 PF00154 recA bacterial DNA recombination protein AYJ52_15635 PF02631 RecX family AYJ52_15650 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AYJ52_15650 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_15655 PF07977 FabA-like domain AYJ52_15660 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_15660 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AYJ52_15670 PF07244 Surface antigen variable number repeat AYJ52_15670 PF01103 Surface antigen AYJ52_15675 PF17820 PDZ domain AYJ52_15675 PF13180 PDZ domain AYJ52_15675 PF02163 Peptidase family M50 AYJ52_15680 PF13288 DXP reductoisomerase C-terminal domain AYJ52_15680 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AYJ52_15680 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AYJ52_15690 PF01255 Putative undecaprenyl diphosphate synthase AYJ52_15695 PF01765 Ribosome recycling factor AYJ52_15700 PF00696 Amino acid kinase family AYJ52_15705 PF00919 Uncharacterized protein family UPF0004 AYJ52_15705 PF18693 TRAM domain AYJ52_15705 PF04055 Radical SAM superfamily AYJ52_15710 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_15710 PF00989 PAS fold AYJ52_15710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_15715 PF00158 Sigma-54 interaction domain AYJ52_15715 PF00072 Response regulator receiver domain AYJ52_15715 PF02954 Bacterial regulatory protein, Fis family AYJ52_15720 PF00440 Bacterial regulatory proteins, tetR family AYJ52_15725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYJ52_15725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYJ52_15735 PF02542 YgbB family AYJ52_15745 PF01266 FAD dependent oxidoreductase AYJ52_15765 PF00561 alpha/beta hydrolase fold AYJ52_15780 PF13333 Integrase core domain AYJ52_15780 PF13276 HTH-like domain AYJ52_15780 PF00665 Integrase core domain AYJ52_15790 PF00206 Lyase AYJ52_15790 PF10415 Fumarase C C-terminus AYJ52_15795 PF16363 GDP-mannose 4,6 dehydratase AYJ52_15800 PF02635 DsrE/DsrF-like family AYJ52_15820 PF00892 EamA-like transporter family AYJ52_15825 PF00392 Bacterial regulatory proteins, gntR family AYJ52_15825 PF00155 Aminotransferase class I and II AYJ52_15830 PF01638 HxlR-like helix-turn-helix AYJ52_15835 PF00994 Probable molybdopterin binding domain AYJ52_15835 PF03454 MoeA C-terminal region (domain IV) AYJ52_15835 PF03453 MoeA N-terminal region (domain I and II) AYJ52_15840 PF01967 MoaC family AYJ52_15840 PF00994 Probable molybdopterin binding domain AYJ52_15845 PF02391 MoaE protein AYJ52_15855 PF06463 Molybdenum Cofactor Synthesis C AYJ52_15855 PF04055 Radical SAM superfamily AYJ52_15860 PF01568 Molydopterin dinucleotide binding domain AYJ52_15860 PF00384 Molybdopterin oxidoreductase AYJ52_15860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AYJ52_15865 PF12804 MobA-like NTP transferase domain AYJ52_15870 PF04324 BFD-like [2Fe-2S] binding domain AYJ52_15870 PF00384 Molybdopterin oxidoreductase AYJ52_15870 PF01568 Molydopterin dinucleotide binding domain AYJ52_15870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AYJ52_15875 PF04324 BFD-like [2Fe-2S] binding domain AYJ52_15875 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AYJ52_15875 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AYJ52_15875 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_15875 PF18267 Rubredoxin NAD+ reductase C-terminal domain AYJ52_15880 PF18267 Rubredoxin NAD+ reductase C-terminal domain AYJ52_15880 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_15880 PF13806 Rieske-like [2Fe-2S] domain AYJ52_15880 PF04324 BFD-like [2Fe-2S] binding domain AYJ52_15880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AYJ52_15880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AYJ52_15895 PF00005 ABC transporter AYJ52_15900 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_15905 PF02423 Ornithine cyclodeaminase/mu-crystallin family AYJ52_15910 PF06276 Ferric iron reductase FhuF-like transporter AYJ52_15910 PF04183 IucA / IucC family AYJ52_15915 PF07690 Major Facilitator Superfamily AYJ52_15920 PF06276 Ferric iron reductase FhuF-like transporter AYJ52_15920 PF04183 IucA / IucC family AYJ52_15925 PF03328 HpcH/HpaI aldolase/citrate lyase family AYJ52_15930 PF00593 TonB dependent receptor AYJ52_15930 PF07715 TonB-dependent Receptor Plug Domain AYJ52_15935 PF13438 Domain of unknown function (DUF4113) AYJ52_15935 PF00817 impB/mucB/samB family AYJ52_15935 PF11799 impB/mucB/samB family C-terminal domain AYJ52_15940 PF01220 Dehydroquinase class II AYJ52_15945 PF00364 Biotin-requiring enzyme AYJ52_15950 PF02785 Biotin carboxylase C-terminal domain AYJ52_15950 PF00289 Biotin carboxylase, N-terminal domain AYJ52_15950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYJ52_15960 PF12832 MFS_1 like family AYJ52_15990 PF01645 Conserved region in glutamate synthase AYJ52_16015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AYJ52_16015 PF01565 FAD binding domain AYJ52_16020 PF01451 Low molecular weight phosphotyrosine protein phosphatase AYJ52_16030 PF01638 HxlR-like helix-turn-helix AYJ52_16045 PF00465 Iron-containing alcohol dehydrogenase AYJ52_16050 PF03061 Thioesterase superfamily AYJ52_16055 PF04185 Phosphoesterase family AYJ52_16055 PF05506 Domain of unknown function (DUF756) AYJ52_16060 PF12169 DNA polymerase III subunits gamma and tau domain III AYJ52_16060 PF12170 DNA polymerase III tau subunit V interacting with alpha AYJ52_16060 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AYJ52_16075 PF07690 Major Facilitator Superfamily AYJ52_16100 PF02803 Thiolase, C-terminal domain AYJ52_16100 PF00108 Thiolase, N-terminal domain AYJ52_16110 PF03466 LysR substrate binding domain AYJ52_16110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_16120 PF01810 LysE type translocator AYJ52_16125 PF01037 Lrp/AsnC ligand binding domain AYJ52_16130 PF03594 Benzoate membrane transport protein AYJ52_16145 PF00582 Universal stress protein family AYJ52_16150 PF00005 ABC transporter AYJ52_16150 PF12848 ABC transporter AYJ52_16155 PF04151 Bacterial pre-peptidase C-terminal domain AYJ52_16175 PF13936 Helix-turn-helix domain AYJ52_16175 PF00665 Integrase core domain AYJ52_16180 PF03466 LysR substrate binding domain AYJ52_16180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_16200 PF00959 Phage lysozyme AYJ52_16230 PF13936 Helix-turn-helix domain AYJ52_16230 PF00665 Integrase core domain AYJ52_16255 PF18331 PKHD-type hydroxylase C-terminal domain AYJ52_16255 PF13640 2OG-Fe(II) oxygenase superfamily AYJ52_16260 PF00593 TonB dependent receptor AYJ52_16260 PF07715 TonB-dependent Receptor Plug Domain AYJ52_16265 PF07715 TonB-dependent Receptor Plug Domain AYJ52_16265 PF07660 Secretin and TonB N terminus short domain AYJ52_16265 PF00593 TonB dependent receptor AYJ52_16270 PF00665 Integrase core domain AYJ52_16270 PF13276 HTH-like domain AYJ52_16270 PF13333 Integrase core domain AYJ52_16285 PF01817 Chorismate mutase type II AYJ52_16310 PF00577 Outer membrane usher protein AYJ52_16310 PF13954 PapC N-terminal domain AYJ52_16310 PF13953 PapC C-terminal domain AYJ52_16325 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AYJ52_16325 PF11940 Domain of unknown function (DUF3458) Ig-like fold AYJ52_16325 PF01433 Peptidase family M1 domain AYJ52_16340 PF02110 Hydroxyethylthiazole kinase family AYJ52_16350 PF14493 Helix-turn-helix domain AYJ52_16350 PF05970 PIF1-like helicase AYJ52_16355 PF00465 Iron-containing alcohol dehydrogenase AYJ52_16370 PF00171 Aldehyde dehydrogenase family AYJ52_16375 PF13520 Amino acid permease AYJ52_16380 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AYJ52_16385 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AYJ52_16390 PF02540 NAD synthase AYJ52_16390 PF00958 GMP synthase C terminal domain AYJ52_16390 PF00117 Glutamine amidotransferase class-I AYJ52_16395 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AYJ52_16395 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYJ52_16400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AYJ52_16405 PF00149 Calcineurin-like phosphoesterase AYJ52_16415 PF00881 Nitroreductase family AYJ52_16425 PF17209 Hfq protein AYJ52_16435 PF01119 DNA mismatch repair protein, C-terminal domain AYJ52_16435 PF08676 MutL C terminal dimerisation domain AYJ52_16440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AYJ52_16445 PF01479 S4 domain AYJ52_16445 PF00849 RNA pseudouridylate synthase AYJ52_16460 PF01479 S4 domain AYJ52_16460 PF00849 RNA pseudouridylate synthase AYJ52_16470 PF04284 Protein of unknown function (DUF441) AYJ52_16475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_16475 PF03466 LysR substrate binding domain AYJ52_16490 PF07690 Major Facilitator Superfamily AYJ52_16495 PF00027 Cyclic nucleotide-binding domain AYJ52_16495 PF00520 Ion transport protein AYJ52_16505 PF00330 Aconitase family (aconitate hydratase) AYJ52_16505 PF06434 Aconitate hydratase 2 N-terminus AYJ52_16505 PF11791 Aconitate B N-terminal domain AYJ52_16525 PF07244 Surface antigen variable number repeat AYJ52_16525 PF01103 Surface antigen AYJ52_16525 PF17243 POTRA domain TamA domain 1 AYJ52_16530 PF07690 Major Facilitator Superfamily AYJ52_16535 PF03232 Ubiquinone biosynthesis protein COQ7 AYJ52_16545 PF00120 Glutamine synthetase, catalytic domain AYJ52_16550 PF00486 Transcriptional regulatory protein, C terminal AYJ52_16550 PF00072 Response regulator receiver domain AYJ52_16555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_16555 PF13493 Domain of unknown function (DUF4118) AYJ52_16555 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_16555 PF02702 Osmosensitive K+ channel His kinase sensor domain AYJ52_16560 PF02669 K+-transporting ATPase, c chain AYJ52_16570 PF03814 Potassium-transporting ATPase A subunit AYJ52_16580 PF02152 Dihydroneopterin aldolase AYJ52_16585 PF03109 ABC1 family AYJ52_16590 PF00899 ThiF family AYJ52_16595 PF01613 Flavin reductase like domain AYJ52_16600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_16600 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_16600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_16605 PF00106 short chain dehydrogenase AYJ52_16610 PF12833 Helix-turn-helix domain AYJ52_16615 PF09084 NMT1/THI5 like AYJ52_16620 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_16625 PF13847 Methyltransferase domain AYJ52_16625 PF17827 PrmC N-terminal domain AYJ52_16630 PF00472 RF-1 domain AYJ52_16630 PF03462 PCRF domain AYJ52_16655 PF00296 Luciferase-like monooxygenase AYJ52_16665 PF13994 PgaD-like protein AYJ52_16670 PF00535 Glycosyl transferase family 2 AYJ52_16675 PF14883 Hypothetical glycosyl hydrolase family 13 AYJ52_16675 PF01522 Polysaccharide deacetylase AYJ52_16685 PF00665 Integrase core domain AYJ52_16685 PF13936 Helix-turn-helix domain AYJ52_16690 PF03618 Kinase/pyrophosphorylase AYJ52_16695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AYJ52_16695 PF00391 PEP-utilising enzyme, mobile domain AYJ52_16695 PF02896 PEP-utilising enzyme, TIM barrel domain AYJ52_16705 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AYJ52_16705 PF06481 COX Aromatic Rich Motif AYJ52_16710 PF00115 Cytochrome C and Quinol oxidase polypeptide I AYJ52_16715 PF00510 Cytochrome c oxidase subunit III AYJ52_16720 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AYJ52_16725 PF01040 UbiA prenyltransferase family AYJ52_16730 PF01250 Ribosomal protein S6 AYJ52_16735 PF01084 Ribosomal protein S18 AYJ52_16740 PF01281 Ribosomal protein L9, N-terminal domain AYJ52_16740 PF03948 Ribosomal protein L9, C-terminal domain AYJ52_16745 PF03796 DnaB-like helicase C terminal domain AYJ52_16745 PF00772 DnaB-like helicase N terminal domain AYJ52_16750 PF01168 Alanine racemase, N-terminal domain AYJ52_16750 PF00842 Alanine racemase, C-terminal domain AYJ52_16760 PF01841 Transglutaminase-like superfamily AYJ52_16760 PF08379 Bacterial transglutaminase-like N-terminal region AYJ52_16770 PF14403 Circularly permuted ATP-grasp type 2 AYJ52_16780 PF13932 GidA associated domain AYJ52_16780 PF01134 Glucose inhibited division protein A AYJ52_16800 PF02954 Bacterial regulatory protein, Fis family AYJ52_16805 PF02142 MGS-like domain AYJ52_16805 PF01808 AICARFT/IMPCHase bienzyme AYJ52_16810 PF02843 Phosphoribosylglycinamide synthetase, C domain AYJ52_16810 PF02844 Phosphoribosylglycinamide synthetase, N domain AYJ52_16810 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AYJ52_16815 PF03180 NLPA lipoprotein AYJ52_16820 PF00005 ABC transporter AYJ52_16820 PF09383 NIL domain AYJ52_16825 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_16830 PF16123 Hydroxyacylglutathione hydrolase C-terminus AYJ52_16830 PF00753 Metallo-beta-lactamase superfamily AYJ52_16840 PF00375 Sodium:dicarboxylate symporter family AYJ52_16860 PF07995 Glucose / Sorbosone dehydrogenase AYJ52_16885 PF03601 Conserved hypothetical protein 698 AYJ52_16900 PF07690 Major Facilitator Superfamily AYJ52_16905 PF05853 beta-keto acid cleavage enzyme AYJ52_16910 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AYJ52_16915 PF08240 Alcohol dehydrogenase GroES-like domain AYJ52_16915 PF00107 Zinc-binding dehydrogenase AYJ52_16920 PF01177 Asp/Glu/Hydantoin racemase AYJ52_16935 PF00072 Response regulator receiver domain AYJ52_16935 PF00486 Transcriptional regulatory protein, C terminal AYJ52_16940 PF08521 Two-component sensor kinase N-terminal AYJ52_16940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_16940 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_16980 PF00672 HAMP domain AYJ52_16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_16980 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_16985 PF00072 Response regulator receiver domain AYJ52_16985 PF00486 Transcriptional regulatory protein, C terminal AYJ52_16995 PF00576 HIUase/Transthyretin family AYJ52_17005 PF02470 MlaD protein AYJ52_17010 PF04403 Paraquat-inducible protein A AYJ52_17020 PF02080 TrkA-C domain AYJ52_17020 PF06826 Predicted Permease Membrane Region AYJ52_17025 PF00155 Aminotransferase class I and II AYJ52_17030 PF00440 Bacterial regulatory proteins, tetR family AYJ52_17095 PF03616 Sodium/glutamate symporter AYJ52_17100 PF00561 alpha/beta hydrolase fold AYJ52_17115 PF00313 'Cold-shock' DNA-binding domain AYJ52_17140 PF03793 PASTA domain AYJ52_17140 PF00069 Protein kinase domain AYJ52_17160 PF00814 Glycoprotease family AYJ52_17165 PF01165 Ribosomal protein S21 AYJ52_17170 PF09424 Yqey-like protein AYJ52_17175 PF01435 Peptidase family M48 AYJ52_17180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYJ52_17180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYJ52_17195 PF00156 Phosphoribosyl transferase domain AYJ52_17200 PF02674 Colicin V production protein AYJ52_17205 PF01180 Dihydroorotate dehydrogenase AYJ52_17225 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AYJ52_17225 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AYJ52_17230 PF00881 Nitroreductase family AYJ52_17240 PF00270 DEAD/DEAH box helicase AYJ52_17240 PF00271 Helicase conserved C-terminal domain AYJ52_17245 PF00313 'Cold-shock' DNA-binding domain AYJ52_17255 PF04545 Sigma-70, region 4 AYJ52_17255 PF04542 Sigma-70 region 2 AYJ52_17255 PF00140 Sigma-70 factor, region 1.2 AYJ52_17260 PF04241 Protein of unknown function (DUF423) AYJ52_17270 PF05690 Thiazole biosynthesis protein ThiG AYJ52_17280 PF03883 Peroxide stress protein YaaA AYJ52_17290 PF06956 Regulator of RNA terminal phosphate cyclase AYJ52_17290 PF00158 Sigma-54 interaction domain AYJ52_17295 PF00753 Metallo-beta-lactamase superfamily AYJ52_17300 PF01139 tRNA-splicing ligase RtcB AYJ52_17315 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain AYJ52_17315 PF01137 RNA 3'-terminal phosphate cyclase AYJ52_17320 PF01546 Peptidase family M20/M25/M40 AYJ52_17320 PF07687 Peptidase dimerisation domain AYJ52_17330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYJ52_17335 PF01842 ACT domain AYJ52_17335 PF00800 Prephenate dehydratase AYJ52_17335 PF01817 Chorismate mutase type II AYJ52_17350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_17350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_17350 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_17355 PF00375 Sodium:dicarboxylate symporter family AYJ52_17360 PF02885 Glycosyl transferase family, helical bundle domain AYJ52_17360 PF00591 Glycosyl transferase family, a/b domain AYJ52_17365 PF07023 Protein of unknown function (DUF1315) AYJ52_17370 PF01513 ATP-NAD kinase AYJ52_17375 PF00905 Penicillin binding protein transpeptidase domain AYJ52_17375 PF14814 Bifunctional transglycosylase second domain AYJ52_17375 PF00912 Transglycosylase AYJ52_17385 PF00293 NUDIX domain AYJ52_17395 PF08521 Two-component sensor kinase N-terminal AYJ52_17395 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_17395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_17400 PF00486 Transcriptional regulatory protein, C terminal AYJ52_17400 PF00072 Response regulator receiver domain AYJ52_17410 PF00437 Type II/IV secretion system protein AYJ52_17420 PF18389 TrmO C-terminal domain AYJ52_17420 PF01980 tRNA-methyltransferase O AYJ52_17425 PF00175 Oxidoreductase NAD-binding domain AYJ52_17425 PF00970 Oxidoreductase FAD-binding domain AYJ52_17430 PF02567 Phenazine biosynthesis-like protein AYJ52_17435 PF00155 Aminotransferase class I and II AYJ52_17435 PF00392 Bacterial regulatory proteins, gntR family AYJ52_17445 PF00037 4Fe-4S binding domain AYJ52_17450 PF00893 Small Multidrug Resistance protein AYJ52_17455 PF00005 ABC transporter AYJ52_17460 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_17465 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_17470 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYJ52_17475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_17475 PF03466 LysR substrate binding domain AYJ52_17480 PF13533 Biotin-lipoyl like AYJ52_17485 PF00873 AcrB/AcrD/AcrF family AYJ52_17490 PF02321 Outer membrane efflux protein AYJ52_17495 PF00464 Serine hydroxymethyltransferase AYJ52_17520 PF00005 ABC transporter AYJ52_17525 PF01061 ABC-2 type transporter AYJ52_17530 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AYJ52_17530 PF14489 QueF-like protein AYJ52_17540 PF01098 Cell cycle protein AYJ52_17545 PF13406 Transglycosylase SLT domain AYJ52_17550 PF05036 Sporulation related domain AYJ52_17550 PF03330 Lytic transglycolase AYJ52_17565 PF03591 AzlC protein AYJ52_17570 PF12833 Helix-turn-helix domain AYJ52_17580 PF00889 Elongation factor TS AYJ52_17585 PF00318 Ribosomal protein S2 AYJ52_17590 PF00557 Metallopeptidase family M24 AYJ52_17600 PF07690 Major Facilitator Superfamily AYJ52_17610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYJ52_17610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_17615 PF04055 Radical SAM superfamily AYJ52_17620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_17620 PF02770 Acyl-CoA dehydrogenase, middle domain AYJ52_17620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYJ52_17620 PF09317 Domain of unknown function (DUF1974) AYJ52_17635 PF05221 S-adenosyl-L-homocysteine hydrolase AYJ52_17635 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AYJ52_17640 PF02219 Methylenetetrahydrofolate reductase AYJ52_17645 PF04452 RNA methyltransferase AYJ52_17650 PF03707 Bacterial signalling protein N terminal repeat AYJ52_17650 PF00563 EAL domain AYJ52_17650 PF00990 Diguanylate cyclase, GGDEF domain AYJ52_17655 PF03949 Malic enzyme, NAD binding domain AYJ52_17655 PF00390 Malic enzyme, N-terminal domain AYJ52_17655 PF01515 Phosphate acetyl/butaryl transferase AYJ52_17660 PF01743 Poly A polymerase head domain AYJ52_17660 PF12627 Probable RNA and SrmB- binding site of polymerase A AYJ52_17665 PF13180 PDZ domain AYJ52_17670 PF01784 NIF3 (NGG1p interacting factor 3) AYJ52_17675 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AYJ52_17675 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AYJ52_17710 PF01040 UbiA prenyltransferase family AYJ52_17715 PF04345 Chorismate lyase AYJ52_17725 PF00854 POT family AYJ52_17735 PF00117 Glutamine amidotransferase class-I AYJ52_17740 PF11838 ERAP1-like C-terminal domain AYJ52_17740 PF01433 Peptidase family M1 domain AYJ52_17745 PF07715 TonB-dependent Receptor Plug Domain AYJ52_17745 PF00593 TonB dependent receptor AYJ52_17750 PF00591 Glycosyl transferase family, a/b domain AYJ52_17750 PF02885 Glycosyl transferase family, helical bundle domain AYJ52_17755 PF00218 Indole-3-glycerol phosphate synthase AYJ52_17770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AYJ52_17770 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AYJ52_17775 PF01799 [2Fe-2S] binding domain AYJ52_17775 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_17780 PF01227 GTP cyclohydrolase I AYJ52_17785 PF00144 Beta-lactamase AYJ52_17800 PF05675 Protein of unknown function (DUF817) AYJ52_17805 PF01208 Uroporphyrinogen decarboxylase (URO-D) AYJ52_17815 PF00425 chorismate binding enzyme AYJ52_17825 PF00975 Thioesterase domain AYJ52_17830 PF00664 ABC transporter transmembrane region AYJ52_17830 PF00005 ABC transporter AYJ52_17835 PF00664 ABC transporter transmembrane region AYJ52_17835 PF00005 ABC transporter AYJ52_17840 PF00282 Pyridoxal-dependent decarboxylase conserved domain AYJ52_17845 PF00550 Phosphopantetheine attachment site AYJ52_17845 PF00857 Isochorismatase family AYJ52_17850 PF00501 AMP-binding enzyme AYJ52_17850 PF13193 AMP-binding enzyme C-terminal domain AYJ52_17855 PF00550 Phosphopantetheine attachment site AYJ52_17855 PF00668 Condensation domain AYJ52_17855 PF00501 AMP-binding enzyme AYJ52_17860 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AYJ52_17865 PF00593 TonB dependent receptor AYJ52_17865 PF07715 TonB-dependent Receptor Plug Domain AYJ52_17870 PF01497 Periplasmic binding protein AYJ52_17875 PF00005 ABC transporter AYJ52_17880 PF01032 FecCD transport family AYJ52_17885 PF01032 FecCD transport family AYJ52_17890 PF00975 Thioesterase domain AYJ52_17890 PF00550 Phosphopantetheine attachment site AYJ52_17890 PF00668 Condensation domain AYJ52_17890 PF13193 AMP-binding enzyme C-terminal domain AYJ52_17890 PF00501 AMP-binding enzyme AYJ52_17895 PF00501 AMP-binding enzyme AYJ52_17895 PF00668 Condensation domain AYJ52_17895 PF00550 Phosphopantetheine attachment site AYJ52_17895 PF13193 AMP-binding enzyme C-terminal domain AYJ52_17905 PF17954 Quercetinase C-terminal cupin domain AYJ52_17905 PF02678 Pirin AYJ52_17915 PF13309 HTH domain AYJ52_17915 PF08348 YheO-like PAS domain AYJ52_17920 PF00291 Pyridoxal-phosphate dependent enzyme AYJ52_17925 PF02423 Ornithine cyclodeaminase/mu-crystallin family AYJ52_17950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_17950 PF03466 LysR substrate binding domain AYJ52_17960 PF02426 Muconolactone delta-isomerase AYJ52_17965 PF02803 Thiolase, C-terminal domain AYJ52_17965 PF00108 Thiolase, N-terminal domain AYJ52_17970 PF01144 Coenzyme A transferase AYJ52_17975 PF01144 Coenzyme A transferase AYJ52_17995 PF04909 Amidohydrolase AYJ52_18010 PF00375 Sodium:dicarboxylate symporter family AYJ52_18015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_18015 PF03466 LysR substrate binding domain AYJ52_18020 PF13333 Integrase core domain AYJ52_18020 PF13276 HTH-like domain AYJ52_18020 PF00665 Integrase core domain AYJ52_18025 PF01527 Transposase AYJ52_18055 PF00239 Resolvase, N terminal domain AYJ52_18055 PF02796 Helix-turn-helix domain of resolvase AYJ52_18075 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AYJ52_18115 PF04328 Selenoprotein, putative AYJ52_18120 PF13722 5TM C-terminal transporter carbon starvation CstA AYJ52_18120 PF02554 Carbon starvation protein CstA AYJ52_18125 PF08207 Elongation factor P (EF-P) KOW-like domain AYJ52_18125 PF09285 Elongation factor P, C-terminal AYJ52_18125 PF01132 Elongation factor P (EF-P) OB domain AYJ52_18130 PF04055 Radical SAM superfamily AYJ52_18145 PF01197 Ribosomal protein L31 AYJ52_18150 PF13593 SBF-like CPA transporter family (DUF4137) AYJ52_18155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYJ52_18160 PF07690 Major Facilitator Superfamily AYJ52_18165 PF05362 Lon protease (S16) C-terminal proteolytic domain AYJ52_18165 PF13654 AAA domain AYJ52_18170 PF03466 LysR substrate binding domain AYJ52_18170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_18175 PF01476 LysM domain AYJ52_18175 PF01551 Peptidase family M23 AYJ52_18180 PF01975 Survival protein SurE AYJ52_18195 PF07943 Penicillin-binding protein 5, C-terminal domain AYJ52_18195 PF00768 D-alanyl-D-alanine carboxypeptidase AYJ52_18200 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_18205 PF13344 Haloacid dehalogenase-like hydrolase AYJ52_18205 PF00293 NUDIX domain AYJ52_18215 PF04356 Protein of unknown function (DUF489) AYJ52_18220 PF08328 Adenylosuccinate lyase C-terminal AYJ52_18220 PF00206 Lyase AYJ52_18235 PF01343 Peptidase family S49 AYJ52_18235 PF08496 Peptidase family S49 N-terminal AYJ52_18240 PF00005 ABC transporter AYJ52_18245 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_18250 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_18255 PF12849 PBP superfamily domain AYJ52_18260 PF13359 DDE superfamily endonuclease AYJ52_18260 PF13613 Helix-turn-helix of DDE superfamily endonuclease AYJ52_18265 PF13613 Helix-turn-helix of DDE superfamily endonuclease AYJ52_18265 PF13359 DDE superfamily endonuclease AYJ52_18270 PF00324 Amino acid permease AYJ52_18275 PF00205 Thiamine pyrophosphate enzyme, central domain AYJ52_18275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYJ52_18275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYJ52_18280 PF01037 Lrp/AsnC ligand binding domain AYJ52_18285 PF00171 Aldehyde dehydrogenase family AYJ52_18290 PF00282 Pyridoxal-dependent decarboxylase conserved domain AYJ52_18295 PF00202 Aminotransferase class-III AYJ52_18305 PF00487 Fatty acid desaturase AYJ52_18310 PF00111 2Fe-2S iron-sulfur cluster binding domain AYJ52_18310 PF00175 Oxidoreductase NAD-binding domain AYJ52_18310 PF00970 Oxidoreductase FAD-binding domain AYJ52_18315 PF00440 Bacterial regulatory proteins, tetR family AYJ52_18325 PF18339 RapA N-terminal Tudor like domain 1 AYJ52_18325 PF18337 RapA N-terminal Tudor like domain AYJ52_18325 PF00271 Helicase conserved C-terminal domain AYJ52_18325 PF12137 RNA polymerase recycling family C-terminal AYJ52_18325 PF00176 SNF2 family N-terminal domain AYJ52_18330 PF00849 RNA pseudouridylate synthase AYJ52_18340 PF00202 Aminotransferase class-III AYJ52_18345 PF02581 Thiamine monophosphate synthase AYJ52_18370 PF00675 Insulinase (Peptidase family M16) AYJ52_18370 PF05193 Peptidase M16 inactive domain AYJ52_18375 PF02567 Phenazine biosynthesis-like protein AYJ52_18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_18385 PF03466 LysR substrate binding domain AYJ52_18390 PF06779 Uncharacterised MFS-type transporter YbfB AYJ52_18395 PF13276 HTH-like domain AYJ52_18395 PF00665 Integrase core domain AYJ52_18395 PF13333 Integrase core domain AYJ52_18405 PF00180 Isocitrate/isopropylmalate dehydrogenase AYJ52_18410 PF00849 RNA pseudouridylate synthase AYJ52_18415 PF03971 Monomeric isocitrate dehydrogenase AYJ52_18425 PF07943 Penicillin-binding protein 5, C-terminal domain AYJ52_18425 PF00768 D-alanyl-D-alanine carboxypeptidase AYJ52_18430 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYJ52_18435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYJ52_18440 PF00875 DNA photolyase AYJ52_18440 PF03441 FAD binding domain of DNA photolyase AYJ52_18470 PF02350 UDP-N-acetylglucosamine 2-epimerase AYJ52_18485 PF03060 Nitronate monooxygenase AYJ52_18490 PF01207 Dihydrouridine synthase (Dus) AYJ52_18495 PF07759 Protein of unknown function (DUF1615) AYJ52_18505 PF00696 Amino acid kinase family AYJ52_18505 PF01472 PUA domain AYJ52_18510 PF01018 GTP1/OBG AYJ52_18510 PF01926 50S ribosome-binding GTPase AYJ52_18525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYJ52_18525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYJ52_18530 PF00892 EamA-like transporter family AYJ52_18540 PF04851 Type III restriction enzyme, res subunit AYJ52_18540 PF12344 Ultra-violet resistance protein B AYJ52_18540 PF02151 UvrB/uvrC motif AYJ52_18540 PF17757 UvrB interaction domain AYJ52_18540 PF00271 Helicase conserved C-terminal domain AYJ52_18550 PF00990 Diguanylate cyclase, GGDEF domain AYJ52_18550 PF17151 Periplasmic sensor domain AYJ52_18565 PF00892 EamA-like transporter family AYJ52_18585 PF00106 short chain dehydrogenase AYJ52_18590 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AYJ52_18595 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AYJ52_18600 PF02565 Recombination protein O C terminal AYJ52_18600 PF11967 Recombination protein O N terminal AYJ52_18610 PF07650 KH domain AYJ52_18610 PF01926 50S ribosome-binding GTPase AYJ52_18615 PF00035 Double-stranded RNA binding motif AYJ52_18615 PF14622 Ribonuclease-III-like AYJ52_18625 PF10502 Signal peptidase, peptidase S26 AYJ52_18630 PF00009 Elongation factor Tu GTP binding domain AYJ52_18630 PF03144 Elongation factor Tu domain 2 AYJ52_18630 PF00679 Elongation factor G C-terminus AYJ52_18630 PF06421 GTP-binding protein LepA C-terminus AYJ52_18640 PF13180 PDZ domain AYJ52_18645 PF00890 FAD binding domain AYJ52_18645 PF02910 Fumarate reductase flavoprotein C-term AYJ52_18655 PF02223 Thymidylate kinase AYJ52_18660 PF02618 YceG-like family AYJ52_18665 PF01063 Amino-transferase class IV AYJ52_18680 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_18685 PF00528 Binding-protein-dependent transport system inner membrane component AYJ52_18690 PF12857 TOBE-like domain AYJ52_18690 PF00005 ABC transporter AYJ52_18695 PF03466 LysR substrate binding domain AYJ52_18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYJ52_18705 PF00132 Bacterial transferase hexapeptide (six repeats) AYJ52_18705 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AYJ52_18705 PF14602 Hexapeptide repeat of succinyl-transferase AYJ52_18715 PF06508 Queuosine biosynthesis protein QueC AYJ52_18730 PF00578 AhpC/TSA family AYJ52_18745 PF01467 Cytidylyltransferase-like AYJ52_18745 PF00293 NUDIX domain AYJ52_18750 PF00378 Enoyl-CoA hydratase/isomerase AYJ52_18755 PF01784 NIF3 (NGG1p interacting factor 3) AYJ52_18770 PF07690 Major Facilitator Superfamily AYJ52_18775 PF02769 AIR synthase related protein, C-terminal domain AYJ52_18775 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AYJ52_18775 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AYJ52_18780 PF01966 HD domain AYJ52_18785 PF07499 RuvA, C-terminal domain AYJ52_18785 PF01330 RuvA N terminal domain AYJ52_18790 PF05496 Holliday junction DNA helicase RuvB P-loop domain AYJ52_18790 PF05491 RuvB C-terminal winged helix domain AYJ52_18790 PF17864 RuvB AAA lid domain AYJ52_18795 PF07687 Peptidase dimerisation domain AYJ52_18795 PF01546 Peptidase family M20/M25/M40 AYJ52_18800 PF03061 Thioesterase superfamily AYJ52_18805 PF01618 MotA/TolQ/ExbB proton channel family AYJ52_18810 PF02472 Biopolymer transport protein ExbD/TolR AYJ52_18820 PF04052 TolB amino-terminal domain AYJ52_18820 PF07676 WD40-like Beta Propeller Repeat AYJ52_18825 PF00691 OmpA family AYJ52_18845 PF01636 Phosphotransferase enzyme family AYJ52_18850 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AYJ52_18860 PF13610 DDE domain AYJ52_18870 PF13333 Integrase core domain AYJ52_18870 PF00665 Integrase core domain AYJ52_18870 PF13276 HTH-like domain AYJ52_18875 PF01965 DJ-1/PfpI family AYJ52_18880 PF02522 Aminoglycoside 3-N-acetyltransferase AYJ52_18915 PF00809 Pterin binding enzyme AYJ52_18950 PF01551 Peptidase family M23 AYJ52_18950 PF04225 Opacity-associated protein A LysM-like domain AYJ52_18970 PF02195 ParB-like nuclease domain AYJ52_18970 PF17762 HTH domain found in ParB protein AYJ52_18975 PF13614 AAA domain AYJ52_19030 PF00437 Type II/IV secretion system protein AYJ52_19030 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AYJ52_19135 PF14864 Alkyl sulfatase C-terminal AYJ52_19135 PF14863 Alkyl sulfatase dimerisation AYJ52_19135 PF00753 Metallo-beta-lactamase superfamily AYJ52_19140 PF13340 Putative transposase of IS4/5 family (DUF4096) AYJ52_19150 PF12833 Helix-turn-helix domain AYJ52_19150 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AYJ52_19155 PF00171 Aldehyde dehydrogenase family AYJ52_19160 PF05199 GMC oxidoreductase AYJ52_19170 PF15978 Tn7-like transposition protein D AYJ52_19170 PF06527 TniQ AYJ52_19175 PF18623 TnsE C-terminal domain AYJ52_19195 PF00665 Integrase core domain AYJ52_19195 PF13936 Helix-turn-helix domain AYJ52_19200 PF00753 Metallo-beta-lactamase superfamily AYJ52_19210 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AYJ52_19215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AYJ52_19225 PF00166 Chaperonin 10 Kd subunit AYJ52_19230 PF00118 TCP-1/cpn60 chaperonin family AYJ52_19250 PF00665 Integrase core domain AYJ52_19250 PF13936 Helix-turn-helix domain AYJ52_19325 PF01751 Toprim domain AYJ52_19325 PF01396 Topoisomerase DNA binding C4 zinc finger AYJ52_19325 PF01131 DNA topoisomerase AYJ52_19345 PF02661 Fic/DOC family AYJ52_19355 PF02899 Phage integrase, N-terminal SAM-like domain AYJ52_19355 PF00589 Phage integrase family AYJ52_19390 PF00817 impB/mucB/samB family AYJ52_19390 PF13438 Domain of unknown function (DUF4113) AYJ52_19390 PF11799 impB/mucB/samB family C-terminal domain AYJ52_19410 PF02384 N-6 DNA Methylase AYJ52_19410 PF12161 HsdM N-terminal domain AYJ52_19445 PF08676 MutL C terminal dimerisation domain AYJ52_19445 PF01119 DNA mismatch repair protein, C-terminal domain AYJ52_19450 PF01435 Peptidase family M48 AYJ52_19460 PF00816 H-NS histone family AYJ52_19550 PF01636 Phosphotransferase enzyme family AYJ52_19555 PF02796 Helix-turn-helix domain of resolvase AYJ52_19555 PF00239 Resolvase, N terminal domain AYJ52_19565 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_19565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_19565 PF00672 HAMP domain AYJ52_19570 PF00486 Transcriptional regulatory protein, C terminal AYJ52_19570 PF00072 Response regulator receiver domain AYJ52_19575 PF00529 HlyD membrane-fusion protein of T1SS AYJ52_19575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AYJ52_19580 PF00873 AcrB/AcrD/AcrF family AYJ52_19585 PF02321 Outer membrane efflux protein AYJ52_19590 PF07690 Major Facilitator Superfamily AYJ52_19595 PF16736 Single Cache-like AYJ52_19595 PF00989 PAS fold AYJ52_19595 PF00512 His Kinase A (phospho-acceptor) domain AYJ52_19595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYJ52_19600 PF13610 DDE domain AYJ52_19610 PF03389 MobA/MobL family AYJ52_19655 PF13610 DDE domain AYJ52_19670 PF05973 Phage derived protein Gp49-like (DUF891) AYJ52_19675 PF01381 Helix-turn-helix AYJ52_19680 PF01740 STAS domain AYJ52_19680 PF00916 Sulfate permease family AYJ52_19695 PF00905 Penicillin binding protein transpeptidase domain AYJ52_19715 PF12833 Helix-turn-helix domain AYJ52_19740 PF01381 Helix-turn-helix