AYJ52_00090	SM00849	Metallo-beta-lactamase superfamily
AYJ52_00095	SM00382	ATPases associated with a variety of cellular activities
AYJ52_00155	SM00434	DNA Topoisomerase IV
AYJ52_00160	SM00893	Electron transfer flavoprotein domain
AYJ52_00165	SM00893	Electron transfer flavoprotein domain
AYJ52_00210	SM00382	ATPases associated with a variety of cellular activities
AYJ52_00215	SM00978	AYJ52_00215
AYJ52_00335	SM00849	Metallo-beta-lactamase superfamily
AYJ52_00445	SM00849	Metallo-beta-lactamase superfamily
AYJ52_00515	SM00883	Chaperonin 10 Kd subunit
AYJ52_00530	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AYJ52_00605	SM00382	ATPases associated with a variety of cellular activities
AYJ52_00615	SM01103	AYJ52_00615
AYJ52_00630	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AYJ52_00635	SM00851	MGS-like domain
AYJ52_00635	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AYJ52_00680	SM00854	Bacterial capsule synthesis protein PGA_cap
AYJ52_00725	SM00881	CoA binding domain
AYJ52_00745	SM00861	Transketolase, pyrimidine binding domain
AYJ52_00785	SM00450	Rhodanese Homology Domain
AYJ52_00855	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AYJ52_00910	SM00014	Acid phosphatase homologues
AYJ52_00945	SM00822	AYJ52_00945
AYJ52_01005	SM00387	Histidine kinase-like ATPases
AYJ52_01005	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_01010	SM00448	cheY-homologous receiver domain
AYJ52_01010	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_01035	SM00563	Phosphate acyltransferases
AYJ52_01050	SM00244	prohibitin homologues
AYJ52_01180	SM00382	ATPases associated with a variety of cellular activities
AYJ52_01195	SM00829	Enoylreductase
AYJ52_01200	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_01220	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_01250	SM00316	Ribosomal protein S1-like RNA-binding domain
AYJ52_01285	SM00845	GatB domain
AYJ52_01455	SM00260	Two component signalling adaptor domain
AYJ52_01455	SM00448	cheY-homologous receiver domain
AYJ52_01475	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AYJ52_01480	SM00260	Two component signalling adaptor domain
AYJ52_01485	SM00448	cheY-homologous receiver domain
AYJ52_01490	SM00448	cheY-homologous receiver domain
AYJ52_01555	SM00903	Flavin reductase like domain
AYJ52_01585	SM00671	Sel1-like repeats.
AYJ52_01610	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AYJ52_01610	SM01232	AYJ52_01610
AYJ52_01635	SM00838	Elongation factor G C-terminus
AYJ52_01695	SM00564	beta-propeller repeat
AYJ52_01710	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_01760	SM00957	SecA DEAD-like domain
AYJ52_01760	SM00958	SecA preprotein cross-linking domain
AYJ52_01770	SM00849	Metallo-beta-lactamase superfamily
AYJ52_01800	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_01865	SM00448	cheY-homologous receiver domain
AYJ52_01865	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_01870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AYJ52_01870	SM00387	Histidine kinase-like ATPases
AYJ52_01870	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_01995	SM00387	Histidine kinase-like ATPases
AYJ52_01995	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_02030	SM01323	AYJ52_02030
AYJ52_02060	SM00481	DNA polymerase alpha chain like domain
AYJ52_02085	SM00450	Rhodanese Homology Domain
AYJ52_02170	SM00267	diguanylate cyclase
AYJ52_02190	SM00155	Phospholipase D. Active site motifs.
AYJ52_02195	SM00563	Phosphate acyltransferases
AYJ52_02225	SM00650	Ribosomal RNA adenine dimethylases
AYJ52_02275	SM00960	Roadblock/LC7 domain
AYJ52_02385	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AYJ52_02415	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYJ52_02505	SM00316	Ribosomal protein S1-like RNA-binding domain
AYJ52_02505	SM00955	AYJ52_02505
AYJ52_02565	SM00662	RNA polymerases D
AYJ52_02570	SM00363	S4 RNA-binding domain
AYJ52_02570	SM01390	AYJ52_02570
AYJ52_02635	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AYJ52_02640	SM01374	AYJ52_02640
AYJ52_02660	SM00322	K homology RNA-binding domain
AYJ52_02675	SM01382	AYJ52_02675
AYJ52_02675	SM01383	AYJ52_02675
AYJ52_02695	SM01403	AYJ52_02695
AYJ52_02745	SM00563	Phosphate acyltransferases
AYJ52_02760	SM00487	DEAD-like helicases superfamily
AYJ52_02760	SM00490	helicase superfamily c-terminal domain
AYJ52_02805	SM00382	ATPases associated with a variety of cellular activities
AYJ52_02815	SM00487	DEAD-like helicases superfamily
AYJ52_02815	SM00490	helicase superfamily c-terminal domain
AYJ52_02825	SM00861	Transketolase, pyrimidine binding domain
AYJ52_02865	SM00116	Domain in cystathionine beta-synthase and other proteins.
AYJ52_02970	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AYJ52_03155	SM00072	Guanylate kinase homologues.
AYJ52_03160	SM01409	AYJ52_03160
AYJ52_03165	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AYJ52_03165	SM00954	Region found in RelA / SpoT proteins
AYJ52_03245	SM00965	Secretin and TonB N terminus short domain
AYJ52_03265	SM00842	Cell division protein FtsA
AYJ52_03415	SM00671	Sel1-like repeats.
AYJ52_03420	SM00382	ATPases associated with a variety of cellular activities
AYJ52_03430	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_03450	SM00947	Carbonic anhydrase
AYJ52_03455	SM00316	Ribosomal protein S1-like RNA-binding domain
AYJ52_03455	SM00732	Likely ribonuclease with RNase H fold.
AYJ52_03460	SM00448	cheY-homologous receiver domain
AYJ52_03460	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_03465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AYJ52_03465	SM00387	Histidine kinase-like ATPases
AYJ52_03465	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_03520	SM00474	3'-5' exonuclease
AYJ52_03530	SM00382	ATPases associated with a variety of cellular activities
AYJ52_03535	SM00530	Helix-turn-helix XRE-family like proteins 
AYJ52_03550	SM00357	Cold shock protein domain
AYJ52_03570	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_03590	SM00477	DNA/RNA non-specific endonuclease
AYJ52_03590	SM00892	DNA/RNA non-specific endonuclease
AYJ52_03650	SM00530	Helix-turn-helix XRE-family like proteins 
AYJ52_03690	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_03735	SM00530	Helix-turn-helix XRE-family like proteins 
AYJ52_03740	SM00530	Helix-turn-helix XRE-family like proteins 
AYJ52_03790	SM00487	DEAD-like helicases superfamily
AYJ52_03865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_03875	SM00530	Helix-turn-helix XRE-family like proteins 
AYJ52_03910	SM00422	helix_turn_helix, mercury resistance
AYJ52_03930	SM00829	Enoylreductase
AYJ52_03945	SM00267	diguanylate cyclase
AYJ52_03975	SM00387	Histidine kinase-like ATPases
AYJ52_03975	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_03975	SM00448	cheY-homologous receiver domain
AYJ52_03985	SM00421	helix_turn_helix, Lux Regulon
AYJ52_03985	SM00448	cheY-homologous receiver domain
AYJ52_04000	SM00344	helix_turn_helix ASNC type
AYJ52_04040	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AYJ52_04045	SM00937	AYJ52_04045
AYJ52_04070	SM00116	Domain in cystathionine beta-synthase and other proteins.
AYJ52_04070	SM01240	AYJ52_04070
AYJ52_04075	SM00849	Metallo-beta-lactamase superfamily
AYJ52_04120	SM00864	Tubulin/FtsZ family, GTPase domain
AYJ52_04120	SM00865	Tubulin/FtsZ family, C-terminal domain
AYJ52_04125	SM00842	Cell division protein FtsA
AYJ52_04195	SM00267	diguanylate cyclase
AYJ52_04230	SM00095	Transthyretin
AYJ52_04260	SM00387	Histidine kinase-like ATPases
AYJ52_04260	SM00433	TopoisomeraseII
AYJ52_04365	SM00448	cheY-homologous receiver domain
AYJ52_04365	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_04370	SM00387	Histidine kinase-like ATPases
AYJ52_04370	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_04400	SM00450	Rhodanese Homology Domain
AYJ52_04560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_04560	SM00866	AYJ52_04560
AYJ52_04570	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AYJ52_04600	SM00346	helix_turn_helix isocitrate lyase regulation
AYJ52_04630	SM01130	AYJ52_04630
AYJ52_04655	SM00382	ATPases associated with a variety of cellular activities
AYJ52_04680	SM00478	endonuclease III
AYJ52_04680	SM00525	AYJ52_04680
AYJ52_04700	SM00829	Enoylreductase
AYJ52_04705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_04745	SM00271	DnaJ molecular chaperone homology domain
AYJ52_04885	SM00382	ATPases associated with a variety of cellular activities
AYJ52_04900	SM00387	Histidine kinase-like ATPases
AYJ52_04900	SM00433	TopoisomeraseII
AYJ52_04910	SM00480	DNA polymerase III beta subunit
AYJ52_04915	SM00382	ATPases associated with a variety of cellular activities
AYJ52_04915	SM00760	Bacterial dnaA protein helix-turn-helix domain
AYJ52_04930	SM01234	AYJ52_04930
AYJ52_04995	SM00014	Acid phosphatase homologues
AYJ52_05020	SM01001	AIR carboxylase
AYJ52_05045	SM00235	Zinc-dependent metalloprotease
AYJ52_05065	SM00849	Metallo-beta-lactamase superfamily
AYJ52_05115	SM00248	ankyrin repeats
AYJ52_05150	SM00904	Riboflavin kinase
AYJ52_05170	SM00382	ATPases associated with a variety of cellular activities
AYJ52_05185	SM00062	Bacterial periplasmic substrate-binding proteins
AYJ52_05190	SM00062	Bacterial periplasmic substrate-binding proteins
AYJ52_05265	SM00644	AYJ52_05265
AYJ52_05290	SM00226	Low molecular weight phosphatase family
AYJ52_05300	SM00984	UDP binding domain
AYJ52_05335	SM00984	UDP binding domain
AYJ52_05360	SM00984	UDP binding domain
AYJ52_05385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_05385	SM00895	AYJ52_05385
AYJ52_05405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_05405	SM00895	AYJ52_05405
AYJ52_05445	SM00671	Sel1-like repeats.
AYJ52_05490	SM00829	Enoylreductase
AYJ52_05565	SM00344	helix_turn_helix ASNC type
AYJ52_05575	SM01005	Alanine racemase, C-terminal domain
AYJ52_05645	SM00421	helix_turn_helix, Lux Regulon
AYJ52_05660	SM00823	Phosphopantetheine attachment site
AYJ52_05660	SM01294	AYJ52_05660
AYJ52_05665	SM00823	Phosphopantetheine attachment site
AYJ52_05665	SM00824	Thioesterase
AYJ52_05780	SM00836	DALR anticodon binding domain
AYJ52_05780	SM01016	Arginyl tRNA synthetase N terminal dom
AYJ52_05785	SM00919	Malic enzyme, NAD binding domain
AYJ52_05785	SM01274	AYJ52_05785
AYJ52_05805	SM00382	ATPases associated with a variety of cellular activities
AYJ52_05855	SM00382	ATPases associated with a variety of cellular activities
AYJ52_05880	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_05995	SM00422	helix_turn_helix, mercury resistance
AYJ52_06005	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYJ52_06030	SM00387	Histidine kinase-like ATPases
AYJ52_06030	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_06035	SM00448	cheY-homologous receiver domain
AYJ52_06035	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_06045	SM00641	Glycosyl hydrolases family 25
AYJ52_06060	SM01091	Transporter associated domain
AYJ52_06080	SM00434	DNA Topoisomerase IV
AYJ52_06120	SM01130	AYJ52_06120
AYJ52_06125	SM01007	Class II Aldolase and Adducin N-terminal domain
AYJ52_06130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_06205	SM00422	helix_turn_helix, mercury resistance
AYJ52_06215	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AYJ52_06290	SM00530	Helix-turn-helix XRE-family like proteins 
AYJ52_06325	SM00938	Nitrogen regulatory protein P-II
AYJ52_06390	SM00245	tail specific protease
AYJ52_06395	SM00382	ATPases associated with a variety of cellular activities
AYJ52_06395	SM00448	cheY-homologous receiver domain
AYJ52_06400	SM00387	Histidine kinase-like ATPases
AYJ52_06400	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_06405	SM00421	helix_turn_helix, Lux Regulon
AYJ52_06405	SM00448	cheY-homologous receiver domain
AYJ52_06435	SM00899	AYJ52_06435
AYJ52_06525	SM00448	cheY-homologous receiver domain
AYJ52_06525	SM00850	LytTr DNA-binding domain
AYJ52_06555	SM00528	Domain in histone-like proteins of HNS family
AYJ52_06565	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYJ52_06575	SM00240	Forkhead associated domain
AYJ52_06625	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AYJ52_06625	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AYJ52_06630	SM00649	Ribosomal protein L11/L12
AYJ52_06655	SM00663	RNA polymerase I subunit A N-terminus
AYJ52_06695	SM00387	Histidine kinase-like ATPases
AYJ52_06770	SM00465	GIY-YIG type nucleases (URI domain)
AYJ52_06785	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_06795	SM00346	helix_turn_helix isocitrate lyase regulation
AYJ52_06815	SM00732	Likely ribonuclease with RNase H fold.
AYJ52_06830	SM00028	Tetratricopeptide repeats
AYJ52_06840	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AYJ52_06900	SM00316	Ribosomal protein S1-like RNA-binding domain
AYJ52_07010	SM00382	ATPases associated with a variety of cellular activities
AYJ52_07020	SM01387	AYJ52_07020
AYJ52_07025	SM00316	Ribosomal protein S1-like RNA-binding domain
AYJ52_07025	SM00322	K homology RNA-binding domain
AYJ52_07040	SM00271	DnaJ molecular chaperone homology domain
AYJ52_07060	SM00487	DEAD-like helicases superfamily
AYJ52_07060	SM00490	helicase superfamily c-terminal domain
AYJ52_07090	SM00116	Domain in cystathionine beta-synthase and other proteins.
AYJ52_07090	SM01091	Transporter associated domain
AYJ52_07100	SM00382	ATPases associated with a variety of cellular activities
AYJ52_07130	SM00849	Metallo-beta-lactamase superfamily
AYJ52_07195	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYJ52_07225	SM00316	Ribosomal protein S1-like RNA-binding domain
AYJ52_07230	SM00363	S4 RNA-binding domain
AYJ52_07270	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AYJ52_07320	SM01329	AYJ52_07320
AYJ52_07335	SM00316	Ribosomal protein S1-like RNA-binding domain
AYJ52_07340	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_07350	SM00870	AYJ52_07350
AYJ52_07365	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AYJ52_07395	SM00382	ATPases associated with a variety of cellular activities
AYJ52_07405	SM00829	Enoylreductase
AYJ52_07420	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AYJ52_07420	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AYJ52_07420	SM00493	AYJ52_07420
AYJ52_07440	SM00360	RNA recognition motif
AYJ52_07580	SM00671	Sel1-like repeats.
AYJ52_07595	SM00917	LeuA allosteric (dimerisation) domain
AYJ52_07600	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AYJ52_07620	SM00382	ATPases associated with a variety of cellular activities
AYJ52_07620	SM00994	ClpX C4-type zinc finger
AYJ52_07620	SM01086	C-terminal, D2-small domain, of ClpB protein
AYJ52_07695	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYJ52_07695	SM00245	tail specific protease
AYJ52_07705	SM00014	Acid phosphatase homologues
AYJ52_07715	SM00562	AYJ52_07715
AYJ52_07720	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYJ52_07725	SM00028	Tetratricopeptide repeats
AYJ52_07750	SM00564	beta-propeller repeat
AYJ52_07830	SM00825	Beta-ketoacyl synthase
AYJ52_07840	SM00822	AYJ52_07840
AYJ52_07845	SM00825	Beta-ketoacyl synthase
AYJ52_07870	SM00450	Rhodanese Homology Domain
AYJ52_07880	SM00479	AYJ52_07880
AYJ52_07900	SM00382	ATPases associated with a variety of cellular activities
AYJ52_07940	SM00052	Putative diguanylate phosphodiesterase
AYJ52_07940	SM00267	diguanylate cyclase
AYJ52_07960	SM01236	AYJ52_07960
AYJ52_08145	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AYJ52_08150	SM00843	AYJ52_08150
AYJ52_08275	SM00746	metallochaperone-like domain
AYJ52_08280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AYJ52_08280	SM00387	Histidine kinase-like ATPases
AYJ52_08280	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_08285	SM00448	cheY-homologous receiver domain
AYJ52_08285	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_08335	SM00899	AYJ52_08335
AYJ52_08345	SM00422	helix_turn_helix, mercury resistance
AYJ52_08380	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AYJ52_08380	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AYJ52_08420	SM00073	Histidine Phosphotransfer domain
AYJ52_08420	SM00387	Histidine kinase-like ATPases
AYJ52_08420	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_08420	SM00448	cheY-homologous receiver domain
AYJ52_08440	SM00954	Region found in RelA / SpoT proteins
AYJ52_08455	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AYJ52_08500	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AYJ52_08560	SM00873	B3/4 domain
AYJ52_08560	SM00874	tRNA synthetase B5 domain
AYJ52_08560	SM00896	Ferredoxin-fold anticodon binding domain
AYJ52_08565	SM00411	bacterial (prokaryotic) histone like domain
AYJ52_08575	SM00357	Cold shock protein domain
AYJ52_08575	SM00382	ATPases associated with a variety of cellular activities
AYJ52_08575	SM00959	Rho termination factor, N-terminal domain
AYJ52_08595	SM00977	TilS substrate C-terminal domain
AYJ52_08610	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AYJ52_08610	SM00474	3'-5' exonuclease
AYJ52_08610	SM00475	5'-3' exonuclease
AYJ52_08610	SM00482	DNA polymerase A domain
AYJ52_08630	SM00382	ATPases associated with a variety of cellular activities
AYJ52_08640	SM00347	helix_turn_helix multiple antibiotic resistance protein
AYJ52_08660	SM00331	Sigma factor PP2C-like phosphatases
AYJ52_08980	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_09010	SM00903	Flavin reductase like domain
AYJ52_09030	SM00382	ATPases associated with a variety of cellular activities
AYJ52_09115	SM00448	cheY-homologous receiver domain
AYJ52_09115	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_09120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AYJ52_09120	SM00387	Histidine kinase-like ATPases
AYJ52_09120	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_09130	SM00267	diguanylate cyclase
AYJ52_09155	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AYJ52_09160	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AYJ52_09160	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AYJ52_09205	SM00357	Cold shock protein domain
AYJ52_09350	SM00382	ATPases associated with a variety of cellular activities
AYJ52_09350	SM00962	SRP54-type protein, GTPase domain
AYJ52_09350	SM00963	SRP54-type protein, helical bundle domain
AYJ52_09370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_09380	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AYJ52_09385	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AYJ52_09385	SM00292	breast cancer carboxy-terminal domain
AYJ52_09385	SM00532	Ligase N family
AYJ52_09435	SM00363	S4 RNA-binding domain
AYJ52_09470	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AYJ52_09475	SM00822	AYJ52_09475
AYJ52_09485	SM00257	Lysin motif
AYJ52_09530	SM01400	AYJ52_09530
AYJ52_09565	SM00028	Tetratricopeptide repeats
AYJ52_09575	SM00400	zinc finger
AYJ52_09575	SM00493	AYJ52_09575
AYJ52_09635	SM01329	AYJ52_09635
AYJ52_09690	SM00825	Beta-ketoacyl synthase
AYJ52_09710	SM00838	Elongation factor G C-terminus
AYJ52_09710	SM00889	Elongation factor G, domain IV
AYJ52_09750	SM00843	AYJ52_09750
AYJ52_09785	SM00563	Phosphate acyltransferases
AYJ52_09855	SM00382	ATPases associated with a variety of cellular activities
AYJ52_09900	SM01004	Delta-aminolevulinic acid dehydratase
AYJ52_09995	SM00965	Secretin and TonB N terminus short domain
AYJ52_10110	SM01322	AYJ52_10110
AYJ52_10155	SM00346	helix_turn_helix isocitrate lyase regulation
AYJ52_10245	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_10270	SM00822	AYJ52_10270
AYJ52_10285	SM00861	Transketolase, pyrimidine binding domain
AYJ52_10295	SM01018	B12 binding domain
AYJ52_10350	SM00947	Carbonic anhydrase
AYJ52_10360	SM00382	ATPases associated with a variety of cellular activities
AYJ52_10455	SM01091	Transporter associated domain
AYJ52_10500	SM00988	UreE urease accessory protein, N-terminal domain
AYJ52_10545	SM00478	endonuclease III
AYJ52_10555	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AYJ52_10575	SM00382	ATPases associated with a variety of cellular activities
AYJ52_10575	SM00464	Found in ATP-dependent protease La (LON)
AYJ52_10615	SM01011	Aminopeptidase P, N-terminal domain
AYJ52_10635	SM00422	helix_turn_helix, mercury resistance
AYJ52_10690	SM00479	AYJ52_10690
AYJ52_10695	SM00257	Lysin motif
AYJ52_10715	SM00382	ATPases associated with a variety of cellular activities
AYJ52_10750	SM00479	AYJ52_10750
AYJ52_10760	SM00267	diguanylate cyclase
AYJ52_10855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_10855	SM00895	AYJ52_10855
AYJ52_10870	SM00344	helix_turn_helix ASNC type
AYJ52_10925	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_10935	SM00858	AYJ52_10935
AYJ52_10945	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AYJ52_10950	SM01130	AYJ52_10950
AYJ52_10960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_10960	SM00895	AYJ52_10960
AYJ52_11010	SM00347	helix_turn_helix multiple antibiotic resistance protein
AYJ52_11015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_11015	SM00895	AYJ52_11015
AYJ52_11070	SM00822	AYJ52_11070
AYJ52_11080	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_11155	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AYJ52_11160	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AYJ52_11175	SM00788	Adenylosuccinate synthetase
AYJ52_11195	SM00100	Cyclic nucleotide-monophosphate binding domain
AYJ52_11195	SM00419	helix_turn_helix, cAMP Regulatory protein
AYJ52_11215	SM00382	ATPases associated with a variety of cellular activities
AYJ52_11215	SM01086	C-terminal, D2-small domain, of ClpB protein
AYJ52_11230	SM00981	AYJ52_11230
AYJ52_11315	SM00382	ATPases associated with a variety of cellular activities
AYJ52_11315	SM00487	DEAD-like helicases superfamily
AYJ52_11315	SM00490	helicase superfamily c-terminal domain
AYJ52_11315	SM00847	Helicase associated domain (HA2)  Add an annotation
AYJ52_11400	SM00382	ATPases associated with a variety of cellular activities
AYJ52_11400	SM00989	AYJ52_11400
AYJ52_11415	SM00422	helix_turn_helix, mercury resistance
AYJ52_11465	SM00530	Helix-turn-helix XRE-family like proteins 
AYJ52_11495	SM00357	Cold shock protein domain
AYJ52_11510	SM00344	helix_turn_helix ASNC type
AYJ52_11625	SM00849	Metallo-beta-lactamase superfamily
AYJ52_11645	SM00840	AYJ52_11645
AYJ52_11650	SM00116	Domain in cystathionine beta-synthase and other proteins.
AYJ52_11670	SM00382	ATPases associated with a variety of cellular activities
AYJ52_11680	SM00382	ATPases associated with a variety of cellular activities
AYJ52_11735	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AYJ52_11735	SM00534	ATPase domain of DNA mismatch repair MUTS family
AYJ52_11745	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_11765	SM00344	helix_turn_helix ASNC type
AYJ52_11795	SM00357	Cold shock protein domain
AYJ52_11845	SM01060	AYJ52_11845
AYJ52_11870	SM00972	Spore Coat Protein U domain
AYJ52_11875	SM00422	helix_turn_helix, mercury resistance
AYJ52_11950	SM00829	Enoylreductase
AYJ52_11965	SM00796	Allophanate hydrolase subunit 1
AYJ52_11965	SM00797	Allophanate hydrolase subunit 2
AYJ52_11965	SM00878	Biotin carboxylase C-terminal domain
AYJ52_11995	SM00382	ATPases associated with a variety of cellular activities
AYJ52_12065	SM00382	ATPases associated with a variety of cellular activities
AYJ52_12065	SM01086	C-terminal, D2-small domain, of ClpB protein
AYJ52_12100	SM00248	ankyrin repeats
AYJ52_12125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_12140	SM00422	helix_turn_helix, mercury resistance
AYJ52_12255	SM00346	helix_turn_helix isocitrate lyase regulation
AYJ52_12265	SM01005	Alanine racemase, C-terminal domain
AYJ52_12270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_12270	SM00866	AYJ52_12270
AYJ52_12280	SM00382	ATPases associated with a variety of cellular activities
AYJ52_12320	SM00346	helix_turn_helix isocitrate lyase regulation
AYJ52_12340	SM00346	helix_turn_helix isocitrate lyase regulation
AYJ52_12375	SM00882	Coenzyme A transferase
AYJ52_12380	SM00882	Coenzyme A transferase
AYJ52_12425	SM00878	Biotin carboxylase C-terminal domain
AYJ52_12515	SM01236	AYJ52_12515
AYJ52_12520	SM01060	AYJ52_12520
AYJ52_12535	SM00384	DNA binding domain with preference for A/T rich regions
AYJ52_12555	SM00344	helix_turn_helix ASNC type
AYJ52_12565	SM00387	Histidine kinase-like ATPases
AYJ52_12565	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_12565	SM00448	cheY-homologous receiver domain
AYJ52_12570	SM00421	helix_turn_helix, Lux Regulon
AYJ52_12570	SM00448	cheY-homologous receiver domain
AYJ52_12590	SM00382	ATPases associated with a variety of cellular activities
AYJ52_12595	SM00062	Bacterial periplasmic substrate-binding proteins
AYJ52_12600	SM00062	Bacterial periplasmic substrate-binding proteins
AYJ52_12630	SM00450	Rhodanese Homology Domain
AYJ52_12635	SM00822	AYJ52_12635
AYJ52_12670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_12730	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AYJ52_12750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_12795	SM00062	Bacterial periplasmic substrate-binding proteins
AYJ52_12800	SM00382	ATPases associated with a variety of cellular activities
AYJ52_12825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_12825	SM00895	AYJ52_12825
AYJ52_12850	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AYJ52_12855	SM00226	Low molecular weight phosphatase family
AYJ52_12910	SM00481	DNA polymerase alpha chain like domain
AYJ52_12915	SM00870	AYJ52_12915
AYJ52_12940	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_12955	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AYJ52_12990	SM00100	Cyclic nucleotide-monophosphate binding domain
AYJ52_12990	SM00419	helix_turn_helix, cAMP Regulatory protein
AYJ52_13020	SM00382	ATPases associated with a variety of cellular activities
AYJ52_13020	SM00930	AYJ52_13020
AYJ52_13055	SM00062	Bacterial periplasmic substrate-binding proteins
AYJ52_13055	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AYJ52_13070	SM00382	ATPases associated with a variety of cellular activities
AYJ52_13080	SM00344	helix_turn_helix ASNC type
AYJ52_13090	SM00563	Phosphate acyltransferases
AYJ52_13100	SM01236	AYJ52_13100
AYJ52_13155	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_13205	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYJ52_13205	SM00876	Biotin and Thiamin Synthesis associated domain
AYJ52_13225	SM00530	Helix-turn-helix XRE-family like proteins 
AYJ52_13260	SM00861	Transketolase, pyrimidine binding domain
AYJ52_13270	SM00867	YceI-like domain 
AYJ52_13305	SM00344	helix_turn_helix ASNC type
AYJ52_13325	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_13335	SM00382	ATPases associated with a variety of cellular activities
AYJ52_13355	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AYJ52_13365	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AYJ52_13425	SM00470	ParB-like nuclease domain
AYJ52_13440	SM00382	ATPases associated with a variety of cellular activities
AYJ52_13500	SM00986	Uracil DNA glycosylase superfamily
AYJ52_13500	SM00987	UreE urease accessory protein, C-terminal domain 
AYJ52_13525	SM00316	Ribosomal protein S1-like RNA-binding domain
AYJ52_13530	SM00411	bacterial (prokaryotic) histone like domain
AYJ52_13540	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AYJ52_13555	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_13625	SM00382	ATPases associated with a variety of cellular activities
AYJ52_13680	SM00487	DEAD-like helicases superfamily
AYJ52_13680	SM00490	helicase superfamily c-terminal domain
AYJ52_13680	SM00982	AYJ52_13680
AYJ52_13680	SM01058	CarD-like/TRCF domain
AYJ52_13690	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AYJ52_13705	SM00271	DnaJ molecular chaperone homology domain
AYJ52_13740	SM00411	bacterial (prokaryotic) histone like domain
AYJ52_13750	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_13810	SM00855	Phosphoglycerate mutase family
AYJ52_13885	SM01324	AYJ52_13885
AYJ52_13915	SM00493	AYJ52_13915
AYJ52_13920	SM00341	Helicase and RNase D C-terminal
AYJ52_13920	SM00474	3'-5' exonuclease
AYJ52_13955	SM00382	ATPases associated with a variety of cellular activities
AYJ52_13985	SM00267	diguanylate cyclase
AYJ52_14000	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYJ52_14010	SM00861	Transketolase, pyrimidine binding domain
AYJ52_14030	SM00829	Enoylreductase
AYJ52_14040	SM00382	ATPases associated with a variety of cellular activities
AYJ52_14045	SM00849	Metallo-beta-lactamase superfamily
AYJ52_14070	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_14135	SM00882	Coenzyme A transferase
AYJ52_14140	SM00882	Coenzyme A transferase
AYJ52_14185	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_14215	SM00903	Flavin reductase like domain
AYJ52_14225	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_14260	SM00382	ATPases associated with a variety of cellular activities
AYJ52_14310	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYJ52_14335	SM00448	cheY-homologous receiver domain
AYJ52_14335	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_14340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AYJ52_14340	SM00387	Histidine kinase-like ATPases
AYJ52_14340	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_14350	SM00155	Phospholipase D. Active site motifs.
AYJ52_14385	SM00829	Enoylreductase
AYJ52_14485	SM00479	AYJ52_14485
AYJ52_14585	SM01400	AYJ52_14585
AYJ52_14595	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_14605	SM00382	ATPases associated with a variety of cellular activities
AYJ52_14735	SM00912	haemagglutination activity domain
AYJ52_14770	SM00346	helix_turn_helix isocitrate lyase regulation
AYJ52_14820	SM00564	beta-propeller repeat
AYJ52_14850	SM00849	Metallo-beta-lactamase superfamily
AYJ52_14885	SM00822	AYJ52_14885
AYJ52_14930	SM00422	helix_turn_helix, mercury resistance
AYJ52_14975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_14975	SM00895	AYJ52_14975
AYJ52_14990	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AYJ52_15005	SM00882	Coenzyme A transferase
AYJ52_15010	SM00882	Coenzyme A transferase
AYJ52_15040	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_15045	SM00903	Flavin reductase like domain
AYJ52_15090	SM00347	helix_turn_helix multiple antibiotic resistance protein
AYJ52_15110	SM00855	Phosphoglycerate mutase family
AYJ52_15130	SM00346	helix_turn_helix isocitrate lyase regulation
AYJ52_15135	SM00849	Metallo-beta-lactamase superfamily
AYJ52_15165	SM00564	beta-propeller repeat
AYJ52_15175	SM00710	Parallel beta-helix repeats
AYJ52_15210	SM00998	Adenylosuccinate lyase C-terminus
AYJ52_15220	SM00882	Coenzyme A transferase
AYJ52_15225	SM00882	Coenzyme A transferase
AYJ52_15270	SM01192	AYJ52_15270
AYJ52_15270	SM01193	AYJ52_15270
AYJ52_15335	SM00382	ATPases associated with a variety of cellular activities
AYJ52_15335	SM01086	C-terminal, D2-small domain, of ClpB protein
AYJ52_15350	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AYJ52_15390	SM01264	AYJ52_15390
AYJ52_15450	SM00382	ATPases associated with a variety of cellular activities
AYJ52_15450	SM00962	SRP54-type protein, GTPase domain
AYJ52_15450	SM00963	SRP54-type protein, helical bundle domain
AYJ52_15475	SM00116	Domain in cystathionine beta-synthase and other proteins.
AYJ52_15545	SM00347	helix_turn_helix multiple antibiotic resistance protein
AYJ52_15555	SM00052	Putative diguanylate phosphodiesterase
AYJ52_15555	SM00091	PAS domain
AYJ52_15555	SM00267	diguanylate cyclase
AYJ52_15605	SM00344	helix_turn_helix ASNC type
AYJ52_15625	SM00363	S4 RNA-binding domain
AYJ52_15630	SM00382	ATPases associated with a variety of cellular activities
AYJ52_15665	SM00935	Outer membrane protein (OmpH-like)
AYJ52_15675	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYJ52_15705	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYJ52_15710	SM00091	PAS domain
AYJ52_15710	SM00387	Histidine kinase-like ATPases
AYJ52_15710	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_15715	SM00382	ATPases associated with a variety of cellular activities
AYJ52_15715	SM00448	cheY-homologous receiver domain
AYJ52_15755	SM01034	Sensors of blue-light using FAD
AYJ52_15825	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_15835	SM00852	Probable molybdopterin binding domain
AYJ52_15840	SM00852	Probable molybdopterin binding domain
AYJ52_15855	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYJ52_15860	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AYJ52_15870	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AYJ52_15890	SM00448	cheY-homologous receiver domain
AYJ52_15890	SM01012	AYJ52_15890
AYJ52_15950	SM00878	Biotin carboxylase C-terminal domain
AYJ52_15965	SM00972	Spore Coat Protein U domain
AYJ52_15980	SM00972	Spore Coat Protein U domain
AYJ52_16020	SM00226	Low molecular weight phosphatase family
AYJ52_16060	SM00382	ATPases associated with a variety of cellular activities
AYJ52_16095	SM00822	AYJ52_16095
AYJ52_16125	SM00344	helix_turn_helix ASNC type
AYJ52_16150	SM00382	ATPases associated with a variety of cellular activities
AYJ52_16255	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AYJ52_16285	SM00830	Chorismate mutase type II
AYJ52_16305	SM00972	Spore Coat Protein U domain
AYJ52_16320	SM00972	Spore Coat Protein U domain
AYJ52_16350	SM00382	ATPases associated with a variety of cellular activities
AYJ52_16365	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_16435	SM00853	MutL C terminal dimerisation domain
AYJ52_16435	SM01340	AYJ52_16435
AYJ52_16460	SM00363	S4 RNA-binding domain
AYJ52_16545	SM01230	AYJ52_16545
AYJ52_16550	SM00448	cheY-homologous receiver domain
AYJ52_16550	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_16555	SM00387	Histidine kinase-like ATPases
AYJ52_16555	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_16580	SM00905	Dihydroneopterin aldolase
AYJ52_16595	SM00903	Flavin reductase like domain
AYJ52_16605	SM00822	AYJ52_16605
AYJ52_16610	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_16615	SM00062	Bacterial periplasmic substrate-binding proteins
AYJ52_16630	SM00937	AYJ52_16630
AYJ52_16750	SM01005	Alanine racemase, C-terminal domain
AYJ52_16760	SM00460	Transglutaminase/protease-like homologues
AYJ52_16780	SM01228	AYJ52_16780
AYJ52_16805	SM00798	AICARFT/IMPCHase bienzyme
AYJ52_16805	SM00851	MGS-like domain
AYJ52_16810	SM01209	AYJ52_16810
AYJ52_16810	SM01210	AYJ52_16810
AYJ52_16820	SM00382	ATPases associated with a variety of cellular activities
AYJ52_16820	SM00930	AYJ52_16820
AYJ52_16830	SM00849	Metallo-beta-lactamase superfamily
AYJ52_16880	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_16915	SM00829	Enoylreductase
AYJ52_16935	SM00448	cheY-homologous receiver domain
AYJ52_16935	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_16940	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_16980	SM00387	Histidine kinase-like ATPases
AYJ52_16980	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_16985	SM00448	cheY-homologous receiver domain
AYJ52_16985	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_16995	SM00095	Transthyretin
AYJ52_17045	SM00972	Spore Coat Protein U domain
AYJ52_17070	SM00972	Spore Coat Protein U domain
AYJ52_17110	SM01034	Sensors of blue-light using FAD
AYJ52_17115	SM00357	Cold shock protein domain
AYJ52_17220	SM00855	Phosphoglycerate mutase family
AYJ52_17240	SM00487	DEAD-like helicases superfamily
AYJ52_17240	SM00490	helicase superfamily c-terminal domain
AYJ52_17245	SM00357	Cold shock protein domain
AYJ52_17290	SM00382	ATPases associated with a variety of cellular activities
AYJ52_17335	SM00830	Chorismate mutase type II
AYJ52_17395	SM00387	Histidine kinase-like ATPases
AYJ52_17395	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_17400	SM00448	cheY-homologous receiver domain
AYJ52_17400	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_17435	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AYJ52_17455	SM00382	ATPases associated with a variety of cellular activities
AYJ52_17470	SM00062	Bacterial periplasmic substrate-binding proteins
AYJ52_17505	SM00479	AYJ52_17505
AYJ52_17520	SM00382	ATPases associated with a variety of cellular activities
AYJ52_17570	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_17615	SM00729	Elongator protein 3, MiaB family, Radical SAM
AYJ52_17635	SM00996	S-adenosyl-L-homocysteine hydrolase
AYJ52_17635	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AYJ52_17650	SM00052	Putative diguanylate phosphodiesterase
AYJ52_17650	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AYJ52_17650	SM00091	PAS domain
AYJ52_17650	SM00267	diguanylate cyclase
AYJ52_17655	SM00919	Malic enzyme, NAD binding domain
AYJ52_17655	SM01274	AYJ52_17655
AYJ52_17665	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYJ52_17720	SM01230	AYJ52_17720
AYJ52_17760	SM00463	Small MutS-related domain
AYJ52_17770	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AYJ52_17775	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AYJ52_17830	SM00382	ATPases associated with a variety of cellular activities
AYJ52_17835	SM00382	ATPases associated with a variety of cellular activities
AYJ52_17875	SM00382	ATPases associated with a variety of cellular activities
AYJ52_17970	SM00882	Coenzyme A transferase
AYJ52_17975	SM00882	Coenzyme A transferase
AYJ52_18055	SM00857	Resolvase, N terminal domain
AYJ52_18125	SM00841	Elongation factor P, C-terminal
AYJ52_18125	SM01185	AYJ52_18125
AYJ52_18140	SM00052	Putative diguanylate phosphodiesterase
AYJ52_18175	SM00257	Lysin motif
AYJ52_18195	SM00936	Penicillin-binding protein 5, C-terminal domain 
AYJ52_18240	SM00382	ATPases associated with a variety of cellular activities
AYJ52_18280	SM00344	helix_turn_helix ASNC type
AYJ52_18325	SM00487	DEAD-like helicases superfamily
AYJ52_18325	SM00490	helicase superfamily c-terminal domain
AYJ52_18355	SM00880	AYJ52_18355
AYJ52_18355	SM01118	AYJ52_18355
AYJ52_18405	SM01329	AYJ52_18405
AYJ52_18420	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYJ52_18505	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AYJ52_18525	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AYJ52_18540	SM00487	DEAD-like helicases superfamily
AYJ52_18540	SM00490	helicase superfamily c-terminal domain
AYJ52_18550	SM00267	diguanylate cyclase
AYJ52_18615	SM00358	Double-stranded RNA binding motif
AYJ52_18615	SM00535	Ribonuclease III family
AYJ52_18630	SM00838	Elongation factor G C-terminus
AYJ52_18640	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AYJ52_18690	SM00382	ATPases associated with a variety of cellular activities
AYJ52_18775	SM01211	AYJ52_18775
AYJ52_18780	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AYJ52_18785	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AYJ52_18790	SM00382	ATPases associated with a variety of cellular activities
AYJ52_18970	SM00470	ParB-like nuclease domain
AYJ52_19110	SM00507	HNH nucleases
AYJ52_19135	SM00849	Metallo-beta-lactamase superfamily
AYJ52_19150	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_19200	SM00849	Metallo-beta-lactamase superfamily
AYJ52_19225	SM00883	Chaperonin 10 Kd subunit
AYJ52_19325	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AYJ52_19325	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AYJ52_19325	SM00493	AYJ52_19325
AYJ52_19395	SM00479	AYJ52_19395
AYJ52_19425	SM00487	DEAD-like helicases superfamily
AYJ52_19460	SM00528	Domain in histone-like proteins of HNS family
AYJ52_19545	SM00382	ATPases associated with a variety of cellular activities
AYJ52_19555	SM00857	Resolvase, N terminal domain
AYJ52_19565	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AYJ52_19565	SM00387	Histidine kinase-like ATPases
AYJ52_19565	SM00388	His Kinase A (phosphoacceptor) domain
AYJ52_19570	SM00448	cheY-homologous receiver domain
AYJ52_19570	SM00862	Transcriptional regulatory protein, C terminal
AYJ52_19595	SM00387	Histidine kinase-like ATPases
AYJ52_19630	SM00530	Helix-turn-helix XRE-family like proteins 
AYJ52_19715	SM00342	helix_turn_helix, arabinose operon control protein
AYJ52_19745	SM00860	SMI1 / KNR4 family
AYJ52_19755	SM00530	Helix-turn-helix XRE-family like proteins 
