AYJ52_08935 075aebba97ab15d801e93198a879a6d1 264 Pfam PF13531 Bacterial extracellular solute-binding protein 27 259 1.9E-27 T 11-10-2018 AYJ52_08935 075aebba97ab15d801e93198a879a6d1 264 Gene3D G3DSA:3.40.190.10 109 222 1.4E-24 T 11-10-2018 AYJ52_08935 075aebba97ab15d801e93198a879a6d1 264 Gene3D G3DSA:3.40.190.10 34 258 1.4E-24 T 11-10-2018 AYJ52_08935 075aebba97ab15d801e93198a879a6d1 264 SUPERFAMILY SSF53850 25 259 2.93E-35 T 11-10-2018 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 3.5E-105 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 Pfam PF00231 ATP synthase 3 288 4.1E-95 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 36.171 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 Gene3D G3DSA:3.40.1380.10 61 208 1.1E-103 T 11-10-2018 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 SUPERFAMILY SSF52943 2 289 8.76E-93 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 Gene3D G3DSA:1.10.287.80 6 285 1.1E-103 T 11-10-2018 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.7E-34 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 1.7E-34 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.7E-34 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 1.7E-34 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05850 b6db20bb34678c4d13a43013f59d0516 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_01075 5366e394a7e9f801e45d5184d43fd88b 259 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 89 119 1.9E-10 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AYJ52_01075 5366e394a7e9f801e45d5184d43fd88b 259 Gene3D G3DSA:3.90.79.20 4 121 5.0E-21 T 11-10-2018 AYJ52_01075 5366e394a7e9f801e45d5184d43fd88b 259 ProSitePatterns PS00893 Nudix box signature. 156 177 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AYJ52_01075 5366e394a7e9f801e45d5184d43fd88b 259 Pfam PF00293 NUDIX domain 126 231 2.2E-17 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_01075 5366e394a7e9f801e45d5184d43fd88b 259 Gene3D G3DSA:3.90.79.10 122 250 1.6E-38 T 11-10-2018 AYJ52_01075 5366e394a7e9f801e45d5184d43fd88b 259 SUPERFAMILY SSF55811 75 241 2.57E-43 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_01075 5366e394a7e9f801e45d5184d43fd88b 259 SUPERFAMILY SSF55811 11 92 6.09E-7 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_07590 2c63c73473af8ef43ba233b95a92086c 386 SUPERFAMILY SSF53474 11 373 2.27E-98 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_07590 2c63c73473af8ef43ba233b95a92086c 386 Gene3D G3DSA:3.40.50.1820 24 359 9.5E-139 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_07590 2c63c73473af8ef43ba233b95a92086c 386 PIRSF PIRSF000443 2 381 4.9E-130 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 AYJ52_07590 2c63c73473af8ef43ba233b95a92086c 386 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 8 373 28.665 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 AYJ52_07590 2c63c73473af8ef43ba233b95a92086c 386 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 19 372 1.5E-137 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 AYJ52_07590 2c63c73473af8ef43ba233b95a92086c 386 Gene3D G3DSA:1.10.1740.110 186 291 9.5E-139 T 11-10-2018 AYJ52_07590 2c63c73473af8ef43ba233b95a92086c 386 Pfam PF00561 alpha/beta hydrolase fold 49 358 4.6E-31 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_01905 04eb459563010a17435a7ce8ab46c8a8 487 SUPERFAMILY SSF56024 76 268 2.09E-18 T 11-10-2018 AYJ52_01905 04eb459563010a17435a7ce8ab46c8a8 487 Gene3D G3DSA:3.30.870.10 300 458 3.1E-28 T 11-10-2018 AYJ52_01905 04eb459563010a17435a7ce8ab46c8a8 487 Pfam PF13091 PLD-like domain 311 450 3.0E-22 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AYJ52_01905 04eb459563010a17435a7ce8ab46c8a8 487 SUPERFAMILY SSF56024 292 454 1.83E-20 T 11-10-2018 AYJ52_05490 480e290dd801fd5fb04c91d23ce82d0c 355 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 8 349 2.2E-110 T 11-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AYJ52_05490 480e290dd801fd5fb04c91d23ce82d0c 355 Gene3D G3DSA:3.90.180.10 30 348 5.1E-96 T 11-10-2018 AYJ52_05490 480e290dd801fd5fb04c91d23ce82d0c 355 Gene3D G3DSA:3.40.50.720 133 290 5.1E-96 T 11-10-2018 AYJ52_05490 480e290dd801fd5fb04c91d23ce82d0c 355 SUPERFAMILY SSF50129 17 145 4.72E-28 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_05490 480e290dd801fd5fb04c91d23ce82d0c 355 SUPERFAMILY SSF51735 122 300 1.45E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_05490 480e290dd801fd5fb04c91d23ce82d0c 355 SMART SM00829 19 349 2.9E-9 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AYJ52_05490 480e290dd801fd5fb04c91d23ce82d0c 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 111 7.5E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AYJ52_05490 480e290dd801fd5fb04c91d23ce82d0c 355 Pfam PF13602 Zinc-binding dehydrogenase 208 349 4.8E-16 T 11-10-2018 AYJ52_16940 804784723ac187acec548ea771e0490e 442 Gene3D G3DSA:3.30.565.10 288 429 5.7E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_16940 804784723ac187acec548ea771e0490e 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 280 7.5E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_16940 804784723ac187acec548ea771e0490e 442 Gene3D G3DSA:1.10.287.130 167 286 3.5E-19 T 11-10-2018 AYJ52_16940 804784723ac187acec548ea771e0490e 442 SMART SM00388 222 284 1.3E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_16940 804784723ac187acec548ea771e0490e 442 SUPERFAMILY SSF55874 293 418 1.13E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_16940 804784723ac187acec548ea771e0490e 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 422 6.3E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_16940 804784723ac187acec548ea771e0490e 442 SUPERFAMILY SSF47384 205 280 3.53E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 Gene3D G3DSA:3.30.70.610 267 344 2.3E-14 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 Gene3D G3DSA:3.30.70.610 353 430 8.9E-18 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 7 564 56.818 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 Gene3D G3DSA:3.30.1370.20 431 515 7.1E-40 T 11-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 SUPERFAMILY SSF56176 7 269 7.48E-70 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 Pfam PF01565 FAD binding domain 45 163 2.9E-7 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 SUPERFAMILY SSF55103 274 563 5.89E-105 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 Gene3D G3DSA:3.30.43.10 2 100 1.3E-12 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 PIRSF PIRSF000101 1 565 1.7E-269 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 Gene3D G3DSA:3.30.465.10 103 266 1.6E-73 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AYJ52_05395 e86334b99563bc2e7a1940f68191b65c 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 275 563 8.2E-134 T 11-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AYJ52_05410 4c2ef9c1d054565cd2919eb44ac89e7b 294 SUPERFAMILY SSF51621 5 288 2.06E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AYJ52_05410 4c2ef9c1d054565cd2919eb44ac89e7b 294 Gene3D G3DSA:3.20.20.60 3 294 3.5E-101 T 11-10-2018 AYJ52_05410 4c2ef9c1d054565cd2919eb44ac89e7b 294 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 48.821 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AYJ52_05410 4c2ef9c1d054565cd2919eb44ac89e7b 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 253 1.4E-47 T 11-10-2018 AYJ52_05410 4c2ef9c1d054565cd2919eb44ac89e7b 294 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AYJ52_05410 4c2ef9c1d054565cd2919eb44ac89e7b 294 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 290 2.0E-127 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 6.9E-35 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 SUPERFAMILY SSF51905 4 370 3.11E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 Gene3D G3DSA:3.50.50.60 6 334 5.1E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.6E-67 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 2.6E-67 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.6E-67 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 2.6E-67 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 2.6E-67 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 2.6E-67 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 2.6E-67 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 2.6E-67 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 2.6E-67 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 467 3.0E-170 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 Gene3D G3DSA:3.50.50.60 156 277 5.1E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 SUPERFAMILY SSF55424 344 466 1.19E-36 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 Gene3D G3DSA:3.30.390.30 348 467 9.1E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PIRSF PIRSF000350 1 463 9.9E-87 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 1.3E-38 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-38 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.3E-38 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 1.3E-38 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 1.3E-38 T 11-10-2018 AYJ52_14020 ae7b83a1be95e41f94ba44f8b86f59d1 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 327 3.8E-67 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_16985 4bc87eaed1c4c8ed19ac5d9db1d7780d 223 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 3.3E-87 T 11-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AYJ52_16985 4bc87eaed1c4c8ed19ac5d9db1d7780d 223 Gene3D G3DSA:3.40.50.2300 1 123 3.2E-36 T 11-10-2018 AYJ52_16985 4bc87eaed1c4c8ed19ac5d9db1d7780d 223 SMART SM00448 1 111 8.0E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_16985 4bc87eaed1c4c8ed19ac5d9db1d7780d 223 SUPERFAMILY SSF52172 1 179 3.17E-42 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_16985 4bc87eaed1c4c8ed19ac5d9db1d7780d 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 2.7E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_16985 4bc87eaed1c4c8ed19ac5d9db1d7780d 223 Pfam PF00072 Response regulator receiver domain 3 112 1.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_16985 4bc87eaed1c4c8ed19ac5d9db1d7780d 223 SMART SM00862 144 219 1.3E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_16985 4bc87eaed1c4c8ed19ac5d9db1d7780d 223 Gene3D G3DSA:1.10.10.10 124 222 2.0E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_05180 34457a5bdbbd6e00d7f19456996dd48b 391 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 351 3.7E-189 T 11-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AYJ52_05180 34457a5bdbbd6e00d7f19456996dd48b 391 Gene3D G3DSA:3.20.20.30 1 363 1.8E-143 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AYJ52_05180 34457a5bdbbd6e00d7f19456996dd48b 391 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 382 79.196 T 11-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AYJ52_05180 34457a5bdbbd6e00d7f19456996dd48b 391 Pfam PF00296 Luciferase-like monooxygenase 1 327 3.4E-87 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AYJ52_05180 34457a5bdbbd6e00d7f19456996dd48b 391 SUPERFAMILY SSF51679 1 351 1.31E-95 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 ProSitePatterns PS00622 LuxR-type HTH domain signature. 192 219 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 Pfam PF03472 Autoinducer binding domain 19 160 5.9E-39 T 11-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 231 2.1E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 SUPERFAMILY SSF75516 4 164 1.29E-42 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 Gene3D G3DSA:1.10.10.10 172 238 1.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 192 4.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 208 4.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 208 220 4.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 SUPERFAMILY SSF46894 170 238 1.8E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 SMART SM00421 175 232 4.1E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_05645 64f4d8bd953e7cb99f942f4084160650 238 Gene3D G3DSA:3.30.450.80 3 169 3.9E-55 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 4.5E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 4.5E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 4.5E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 4.5E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 4.5E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 SUPERFAMILY SSF51735 1 236 1.24E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 5 236 5.0E-58 T 11-10-2018 AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 194 3.5E-4 T 11-10-2018 AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 1 237 1.6E-122 T 11-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 6.4E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 6.4E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 6.4E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07840 48d47f4c1ae87266f128fcfd4e8547bb 237 Gene3D G3DSA:3.40.50.720 1 237 1.6E-75 T 11-10-2018 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 297 3.4E-54 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 SUPERFAMILY SSF55424 309 401 6.73E-18 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.6E-14 T 11-10-2018 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.6E-14 T 11-10-2018 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 2.6E-14 T 11-10-2018 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.6E-14 T 11-10-2018 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 SUPERFAMILY SSF51905 144 306 5.96E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 Gene3D G3DSA:3.50.50.60 4 297 5.6E-86 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.6E-11 T 11-10-2018 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 2.6E-11 T 11-10-2018 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 2.6E-11 T 11-10-2018 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 Gene3D G3DSA:3.30.390.30 316 402 1.3E-14 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 Pfam PF14759 Reductase C-terminal 316 401 7.3E-17 T 11-10-2018 IPR028202 Reductase, C-terminal AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 SUPERFAMILY SSF51905 3 191 4.15E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10185 fa5c8e53dd757eeb6478842b168d17bc 403 Gene3D G3DSA:3.50.50.60 113 238 5.6E-86 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 Pfam PF01084 Ribosomal protein S18 19 68 1.3E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.834 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 SUPERFAMILY SSF46911 3 74 1.57E-28 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 3.6E-35 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 9.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 9.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 9.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 9.1E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 Gene3D G3DSA:4.10.640.10 1 75 7.4E-27 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16735 574f8a5447230ac47484967c0f9aa34a 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 20 71 8.0E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_10245 4ddb3a1d9875016ec2d5d01b17115618 262 Gene3D G3DSA:2.60.120.10 19 89 1.1E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_10245 4ddb3a1d9875016ec2d5d01b17115618 262 SUPERFAMILY SSF46689 215 258 1.48E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_10245 4ddb3a1d9875016ec2d5d01b17115618 262 Gene3D G3DSA:1.10.10.60 158 260 6.2E-21 T 11-10-2018 AYJ52_10245 4ddb3a1d9875016ec2d5d01b17115618 262 Pfam PF12833 Helix-turn-helix domain 180 257 1.3E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_10245 4ddb3a1d9875016ec2d5d01b17115618 262 SUPERFAMILY SSF51182 26 186 4.05E-13 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_10245 4ddb3a1d9875016ec2d5d01b17115618 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 252 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AYJ52_10245 4ddb3a1d9875016ec2d5d01b17115618 262 SMART SM00342 174 256 2.1E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_10245 4ddb3a1d9875016ec2d5d01b17115618 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.6E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_10245 4ddb3a1d9875016ec2d5d01b17115618 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.6E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_03165 92d6579c15d5265f09c624c2363e35b7 701 Pfam PF02824 TGS domain 381 440 7.5E-16 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AYJ52_03165 92d6579c15d5265f09c624c2363e35b7 701 Gene3D G3DSA:1.10.3210.10 3 194 2.5E-65 T 11-10-2018 AYJ52_03165 92d6579c15d5265f09c624c2363e35b7 701 Gene3D G3DSA:3.10.20.30 375 445 2.9E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_03165 92d6579c15d5265f09c624c2363e35b7 701 SUPERFAMILY SSF109604 16 194 2.83E-60 T 11-10-2018 AYJ52_03165 92d6579c15d5265f09c624c2363e35b7 701 SUPERFAMILY SSF81271 381 440 5.23E-14 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AYJ52_03165 92d6579c15d5265f09c624c2363e35b7 701 SUPERFAMILY SSF81301 201 354 6.38E-18 T 11-10-2018 AYJ52_03165 92d6579c15d5265f09c624c2363e35b7 701 Pfam PF13328 HD domain 32 178 2.0E-38 T 11-10-2018 IPR003607 HD/PDEase domain AYJ52_03165 92d6579c15d5265f09c624c2363e35b7 701 SMART SM00471 47 157 2.5E-10 T 11-10-2018 IPR003607 HD/PDEase domain AYJ52_03165 92d6579c15d5265f09c624c2363e35b7 701 SMART SM00954 235 345 1.3E-5 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AYJ52_03165 92d6579c15d5265f09c624c2363e35b7 701 Gene3D G3DSA:3.30.460.10 197 325 3.4E-6 T 11-10-2018 AYJ52_04200 a7ebb46cb369f7ca2046a1e194207e9f 608 Pfam PF11412 Disulphide bond corrector protein DsbC 29 137 1.6E-26 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AYJ52_04200 a7ebb46cb369f7ca2046a1e194207e9f 608 Gene3D G3DSA:3.40.30.10 478 605 5.7E-23 T 11-10-2018 AYJ52_04200 a7ebb46cb369f7ca2046a1e194207e9f 608 Pfam PF00085 Thioredoxin 492 599 1.1E-7 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AYJ52_04200 a7ebb46cb369f7ca2046a1e194207e9f 608 SUPERFAMILY SSF52833 483 600 6.67E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_04200 a7ebb46cb369f7ca2046a1e194207e9f 608 Gene3D G3DSA:2.60.40.1250 23 150 1.2E-31 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AYJ52_04200 a7ebb46cb369f7ca2046a1e194207e9f 608 ProSitePatterns PS00194 Thioredoxin family active site. 511 529 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AYJ52_04200 a7ebb46cb369f7ca2046a1e194207e9f 608 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 215 414 5.9E-18 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AYJ52_04200 a7ebb46cb369f7ca2046a1e194207e9f 608 SUPERFAMILY SSF74863 29 137 1.57E-27 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 141 150 8.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 36 48 8.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 116 135 8.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 212 220 8.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 SUPERFAMILY SSF54292 236 350 3.37E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 Gene3D G3DSA:3.40.50.80 112 244 6.3E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 Pfam PF00175 Oxidoreductase NAD-binding domain 118 226 1.1E-18 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 4 352 4.0E-130 T 11-10-2018 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 Gene3D G3DSA:2.40.30.10 2 104 3.1E-23 T 11-10-2018 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 Pfam PF00970 Oxidoreductase FAD-binding domain 17 103 2.2E-9 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 SUPERFAMILY SSF52343 94 242 1.44E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 268 343 4.8E-18 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 Gene3D G3DSA:3.10.20.30 245 353 5.7E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 SUPERFAMILY SSF63380 2 104 6.97E-23 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 2.0E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 36 46 2.0E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 2.0E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 220 2.0E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_12185 1dceabe94e6ed5abf1000e07fde415b0 353 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 2.0E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_02230 2063731980d0770f0d7aa56b1bdce87a 322 Gene3D G3DSA:3.40.718.10 2 322 8.0E-116 T 11-10-2018 AYJ52_02230 2063731980d0770f0d7aa56b1bdce87a 322 SUPERFAMILY SSF53659 4 320 1.22E-101 T 11-10-2018 AYJ52_02230 2063731980d0770f0d7aa56b1bdce87a 322 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 319 3.1E-119 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AYJ52_02230 2063731980d0770f0d7aa56b1bdce87a 322 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 322 33.137 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 AYJ52_02230 2063731980d0770f0d7aa56b1bdce87a 322 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 29 316 2.1E-102 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 SUPERFAMILY SSF55347 292 455 2.74E-55 T 11-10-2018 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 133 466 2.2E-112 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 2.6E-47 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 Gene3D G3DSA:3.30.360.10 291 456 2.7E-114 T 11-10-2018 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 Gene3D G3DSA:3.40.50.720 133 467 2.7E-114 T 11-10-2018 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 SMART SM00846 131 292 4.7E-52 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 1.6E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 1.6E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 1.6E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 1.6E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 410 425 1.6E-19 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 242 3.9E-21 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_18525 b0c5ef601565ffa76681461530d24c7a 485 SUPERFAMILY SSF51735 132 308 5.98E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 TIGRFAM TIGR00422 valS: valine--tRNA ligase 11 945 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 SUPERFAMILY SSF52374 7 653 1.73E-137 T 11-10-2018 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 PRINTS PR00986 Valyl-tRNA synthetase signature 512 530 8.2E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 PRINTS PR00986 Valyl-tRNA synthetase signature 375 388 8.2E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 8.2E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 PRINTS PR00986 Valyl-tRNA synthetase signature 475 496 8.2E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 PRINTS PR00986 Valyl-tRNA synthetase signature 243 260 8.2E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 Gene3D G3DSA:1.10.730.10 593 831 3.6E-70 T 11-10-2018 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 SUPERFAMILY SSF47323 654 913 3.55E-65 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 Pfam PF08264 Anticodon-binding domain of tRNA 686 834 4.2E-38 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 Gene3D G3DSA:3.40.50.620 11 215 3.2E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 643 9.3E-212 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 SUPERFAMILY SSF46589 898 962 1.26E-16 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 898 962 3.0E-22 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 Gene3D G3DSA:1.10.287.380 891 963 2.2E-22 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 Gene3D G3DSA:3.90.740.10 216 367 8.2E-35 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 SUPERFAMILY SSF50677 197 369 1.02E-55 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 Gene3D G3DSA:3.40.50.620 372 565 1.0E-45 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_00955 e7340710ff3161c791f5906d508d344e 965 Hamap MF_02004 Valine--tRNA ligase [valS]. 10 963 15.969 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AYJ52_02740 b6df494662808cbc3b58237148f7fe17 290 SUPERFAMILY SSF54637 5 112 1.26E-36 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_02740 b6df494662808cbc3b58237148f7fe17 290 SUPERFAMILY SSF54637 115 283 2.28E-48 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_02740 b6df494662808cbc3b58237148f7fe17 290 Gene3D G3DSA:3.10.129.90 2 287 9.0E-97 T 11-10-2018 AYJ52_02740 b6df494662808cbc3b58237148f7fe17 290 Pfam PF13622 Thioesterase-like superfamily 33 282 7.7E-53 T 11-10-2018 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 SUPERFAMILY SSF53738 258 362 2.71E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 Gene3D G3DSA:3.40.120.10 175 359 5.9E-66 T 11-10-2018 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 4.6E-40 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 Gene3D G3DSA:3.30.310.50 367 444 1.3E-23 T 11-10-2018 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 252 1.2E-18 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 SUPERFAMILY SSF53738 156 257 3.61E-32 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 439 3.3E-186 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 SUPERFAMILY SSF55957 355 441 6.93E-22 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 363 4.3E-32 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 438 3.0E-14 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 Gene3D G3DSA:3.40.120.10 1 154 3.7E-45 T 11-10-2018 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 Gene3D G3DSA:3.40.120.10 257 336 5.9E-66 T 11-10-2018 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 SUPERFAMILY SSF53738 2 181 6.28E-46 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.0E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.0E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.0E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_04065 ef2173804f4f30f21a20b6d958d0d002 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 441 46.524 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_01385 07566b9604fe48bf59ec74ca63e5640f 261 Pfam PF02698 DUF218 domain 105 250 2.1E-28 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AYJ52_01385 07566b9604fe48bf59ec74ca63e5640f 261 Gene3D G3DSA:3.40.50.620 147 234 2.5E-8 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_17455 5073d3bc5988808fb8256b616fb9d760 258 PIRSF PIRSF039085 3 258 1.1E-119 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AYJ52_17455 5073d3bc5988808fb8256b616fb9d760 258 Pfam PF00005 ABC transporter 22 182 6.3E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_17455 5073d3bc5988808fb8256b616fb9d760 258 SMART SM00382 31 230 1.4E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_17455 5073d3bc5988808fb8256b616fb9d760 258 SUPERFAMILY SSF52540 8 252 7.99E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17455 5073d3bc5988808fb8256b616fb9d760 258 Gene3D G3DSA:3.40.50.300 3 257 8.9E-82 T 11-10-2018 AYJ52_17455 5073d3bc5988808fb8256b616fb9d760 258 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_14470 65102c0bd378953708bd89fb218b1991 407 Pfam PF05144 Phage replication protein CRI 1 260 4.4E-49 T 11-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 AYJ52_14470 65102c0bd378953708bd89fb218b1991 407 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 48 396 1.8E-68 T 11-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 AYJ52_14470 65102c0bd378953708bd89fb218b1991 407 Pfam PF05155 Phage X family 306 395 1.2E-10 T 11-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 AYJ52_14430 65102c0bd378953708bd89fb218b1991 407 Pfam PF05144 Phage replication protein CRI 1 260 4.4E-49 T 11-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 AYJ52_14430 65102c0bd378953708bd89fb218b1991 407 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 48 396 1.8E-68 T 11-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 AYJ52_14430 65102c0bd378953708bd89fb218b1991 407 Pfam PF05155 Phage X family 306 395 1.2E-10 T 11-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.5E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.5E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.5E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.5E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.5E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 Gene3D G3DSA:3.30.70.141 1 143 6.7E-62 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.791 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 SMART SM00562 3 140 1.8E-89 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 SUPERFAMILY SSF54919 1 141 1.44E-58 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_07715 de2c3136116fae84840107b5c18cf067 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.0E-56 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_18715 64a8688cb420a7c6921e93b416eaedc4 226 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 9 209 9.3E-63 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AYJ52_18715 64a8688cb420a7c6921e93b416eaedc4 226 Pfam PF06508 Queuosine biosynthesis protein QueC 8 216 1.9E-76 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AYJ52_18715 64a8688cb420a7c6921e93b416eaedc4 226 SUPERFAMILY SSF52402 8 226 5.29E-65 T 11-10-2018 AYJ52_18715 64a8688cb420a7c6921e93b416eaedc4 226 PIRSF PIRSF006293 5 226 3.3E-77 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AYJ52_18715 64a8688cb420a7c6921e93b416eaedc4 226 Gene3D G3DSA:3.40.50.620 6 222 5.0E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_18715 64a8688cb420a7c6921e93b416eaedc4 226 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 7 222 53.706 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AYJ52_03100 d7e75fe9ff4bec8d75337aa3ae1e2e7e 251 Gene3D G3DSA:1.10.1270.20 170 251 6.8E-31 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AYJ52_03100 d7e75fe9ff4bec8d75337aa3ae1e2e7e 251 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 251 103.479 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AYJ52_03100 d7e75fe9ff4bec8d75337aa3ae1e2e7e 251 PIRSF PIRSF000386 1 250 6.8E-91 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AYJ52_03100 d7e75fe9ff4bec8d75337aa3ae1e2e7e 251 Gene3D G3DSA:3.40.1280.10 1 169 7.7E-63 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ52_03100 d7e75fe9ff4bec8d75337aa3ae1e2e7e 251 SUPERFAMILY SSF75217 1 246 2.81E-96 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AYJ52_03100 d7e75fe9ff4bec8d75337aa3ae1e2e7e 251 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 225 2.0E-54 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AYJ52_03100 d7e75fe9ff4bec8d75337aa3ae1e2e7e 251 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 238 3.0E-89 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 SUPERFAMILY SSF48179 185 281 5.78E-23 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 SMART SM00984 300 404 1.2E-36 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 300 404 6.5E-25 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 SUPERFAMILY SSF52413 285 414 8.37E-33 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 Gene3D G3DSA:3.40.50.720 215 420 4.5E-63 T 11-10-2018 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 Gene3D G3DSA:1.20.5.100 187 214 1.1E-10 T 11-10-2018 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 PIRSF PIRSF000124 1 419 1.7E-108 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 SUPERFAMILY SSF51735 1 188 1.44E-9 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 87 400 7.5E-58 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 Gene3D G3DSA:3.40.50.720 1 186 3.4E-16 T 11-10-2018 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 PIRSF PIRSF500134 1 420 6.5E-118 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AYJ52_05360 28c4901cb099a4d4ba70ed78240a257e 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 186 276 7.1E-25 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Pfam PF00550 Phosphopantetheine attachment site 980 1040 1.9E-12 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 SUPERFAMILY SSF56801 472 990 5.36E-135 T 11-10-2018 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Pfam PF00668 Condensation domain 17 459 1.1E-63 T 11-10-2018 IPR001242 Condensation domain AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Gene3D G3DSA:3.30.559.10 17 394 2.6E-86 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Pfam PF13193 AMP-binding enzyme C-terminal domain 880 952 1.6E-7 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Gene3D G3DSA:1.10.1200.10 968 1047 1.3E-22 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Gene3D G3DSA:3.30.559.30 191 451 2.6E-86 T 11-10-2018 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 SUPERFAMILY SSF52777 18 187 6.11E-24 T 11-10-2018 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 SUPERFAMILY SSF52777 192 456 3.22E-44 T 11-10-2018 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 SUPERFAMILY SSF47336 969 1043 5.63E-18 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 SMART SM00823 Phosphopantetheine attachment site 977 1046 0.002 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 ProSitePatterns PS00455 Putative AMP-binding domain signature. 622 633 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1001 1016 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Pfam PF00975 Thioesterase domain 1064 1313 7.0E-30 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Pfam PF00501 AMP-binding enzyme 488 872 3.0E-84 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 SMART SM00824 Thioesterase 1076 1315 0.0032 T 11-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 SUPERFAMILY SSF53474 1049 1313 7.57E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Gene3D G3DSA:3.30.300.30 867 967 4.9E-32 T 11-10-2018 AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 506 896 1.4E-115 T 11-10-2018 IPR010071 Amino acid adenylation domain AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Gene3D G3DSA:3.40.50.1820 1048 1314 4.2E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_05665 44ccefff89d389e3b34b4f983cc1b7a6 1319 Gene3D G3DSA:3.40.50.12780 473 866 4.2E-110 T 11-10-2018 AYJ52_02715 622df64d6474ecc10b179a8d1fcbcf42 254 Gene3D G3DSA:1.10.490.10 1 149 6.5E-49 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AYJ52_02715 622df64d6474ecc10b179a8d1fcbcf42 254 Pfam PF00042 Globin 5 101 2.5E-9 T 11-10-2018 IPR000971 Globin GO:0020037 AYJ52_02715 622df64d6474ecc10b179a8d1fcbcf42 254 SUPERFAMILY SSF63380 150 251 1.73E-8 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_02715 622df64d6474ecc10b179a8d1fcbcf42 254 SUPERFAMILY SSF46458 1 142 1.06E-35 T 11-10-2018 IPR009050 Globin-like superfamily AYJ52_02715 622df64d6474ecc10b179a8d1fcbcf42 254 Gene3D G3DSA:2.40.30.10 150 253 4.9E-13 T 11-10-2018 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 417 430 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Pfam PF04546 Sigma-70, non-essential region 141 362 2.0E-53 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 586 612 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Pfam PF04542 Sigma-70 region 2 393 462 1.8E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Pfam PF04545 Sigma-70, region 4 561 614 5.4E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Pfam PF04539 Sigma-70 region 3 472 547 1.0E-30 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 626 44.502 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Pfam PF00140 Sigma-70 factor, region 1.2 100 130 2.2E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 389 625 2.7E-122 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Gene3D G3DSA:1.10.220.120 5 66 7.7E-26 T 11-10-2018 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 PRINTS PR00046 Major sigma-70 factor signature 601 612 5.0E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 PRINTS PR00046 Major sigma-70 factor signature 565 577 5.0E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 PRINTS PR00046 Major sigma-70 factor signature 441 449 5.0E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 PRINTS PR00046 Major sigma-70 factor signature 586 601 5.0E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 PRINTS PR00046 Major sigma-70 factor signature 417 430 5.0E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 SUPERFAMILY SSF88946 117 460 1.57E-93 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Pfam PF03979 Sigma-70 factor, region 1.1 8 83 5.4E-27 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 389 614 8.9E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 SUPERFAMILY SSF88659 523 625 5.61E-27 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Gene3D G3DSA:1.10.10.10 466 542 7.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 SUPERFAMILY SSF88659 466 539 1.57E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Gene3D G3DSA:1.10.601.10 115 462 1.2E-130 T 11-10-2018 AYJ52_00805 148556427cbf3fd783b33257303b48ef 628 Gene3D G3DSA:1.10.10.10 543 627 4.3E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_04000 381b931bceca4598980e4e0df306f2d9 137 SUPERFAMILY SSF54909 65 134 2.68E-6 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_04000 381b931bceca4598980e4e0df306f2d9 137 Gene3D G3DSA:3.30.70.920 56 137 9.6E-9 T 11-10-2018 AYJ52_04000 381b931bceca4598980e4e0df306f2d9 137 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 4.5E-12 T 11-10-2018 AYJ52_04000 381b931bceca4598980e4e0df306f2d9 137 Gene3D G3DSA:1.10.10.10 2 55 6.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_04000 381b931bceca4598980e4e0df306f2d9 137 SMART SM00344 5 107 2.7E-17 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_04000 381b931bceca4598980e4e0df306f2d9 137 SUPERFAMILY SSF46785 5 60 4.86E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_04000 381b931bceca4598980e4e0df306f2d9 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 5.7E-7 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_04000 381b931bceca4598980e4e0df306f2d9 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 5.7E-7 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_04000 381b931bceca4598980e4e0df306f2d9 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 5.7E-7 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_17410 063a8315439d9f443648f3e06e5a6e01 585 Gene3D G3DSA:3.30.450.90 167 307 3.5E-41 T 11-10-2018 AYJ52_17410 063a8315439d9f443648f3e06e5a6e01 585 SUPERFAMILY SSF52540 195 582 5.14E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17410 063a8315439d9f443648f3e06e5a6e01 585 SUPERFAMILY SSF160246 15 160 7.32E-8 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AYJ52_17410 063a8315439d9f443648f3e06e5a6e01 585 Pfam PF00437 Type II/IV secretion system protein 214 474 1.4E-77 T 11-10-2018 IPR001482 Type II/IV secretion system protein AYJ52_17410 063a8315439d9f443648f3e06e5a6e01 585 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 71 162 1.4E-11 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AYJ52_17410 063a8315439d9f443648f3e06e5a6e01 585 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 402 416 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AYJ52_17410 063a8315439d9f443648f3e06e5a6e01 585 Gene3D G3DSA:3.40.50.300 311 583 1.8E-105 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 Gene3D G3DSA:3.30.300.10 403 522 2.7E-49 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 PRINTS PR00097 Anthranilate synthase component II signature 56 65 4.9E-6 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 PRINTS PR00097 Anthranilate synthase component II signature 174 187 4.9E-6 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 PRINTS PR00097 Anthranilate synthase component II signature 83 94 4.9E-6 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 5.2E-5 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 5.2E-5 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 5.2E-5 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 201 8.6E-80 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 Pfam PF02540 NAD synthase 217 292 8.9E-9 T 11-10-2018 IPR022310 NAD/GMP synthase AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 522 7.3E-146 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 Gene3D G3DSA:3.40.50.620 206 402 7.5E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 Pfam PF00958 GMP synthase C terminal domain 430 521 1.9E-40 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 SUPERFAMILY SSF54810 402 522 4.45E-48 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 2.8E-7 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 2.8E-7 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 2.8E-7 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 522 55.672 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 Pfam PF00117 Glutamine amidotransferase class-I 14 197 7.3E-41 T 11-10-2018 IPR017926 Glutamine amidotransferase AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 SUPERFAMILY SSF52317 8 234 1.66E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 SUPERFAMILY SSF52402 194 417 1.76E-59 T 11-10-2018 AYJ52_05740 bec551b502a4ed4a4e4df7c46c94e1ed 522 Gene3D G3DSA:3.40.50.880 11 203 2.6E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_07780 eddd358b9a9452290721d9dac33aa35e 184 Pfam PF04279 Intracellular septation protein A 1 177 3.2E-7 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AYJ52_07740 fc9e21b4925a75fe2539a4ae17f66314 430 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 430 32.335 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AYJ52_07740 fc9e21b4925a75fe2539a4ae17f66314 430 PIRSF PIRSF001549 1 428 1.6E-124 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AYJ52_07740 fc9e21b4925a75fe2539a4ae17f66314 430 Gene3D G3DSA:3.40.50.800 329 427 3.2E-27 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AYJ52_07740 fc9e21b4925a75fe2539a4ae17f66314 430 Pfam PF03129 Anticodon binding domain 346 426 2.9E-11 T 11-10-2018 IPR004154 Anticodon-binding AYJ52_07740 fc9e21b4925a75fe2539a4ae17f66314 430 SUPERFAMILY SSF52954 335 427 1.11E-15 T 11-10-2018 AYJ52_07740 fc9e21b4925a75fe2539a4ae17f66314 430 SUPERFAMILY SSF55681 7 324 1.99E-97 T 11-10-2018 AYJ52_07740 fc9e21b4925a75fe2539a4ae17f66314 430 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 416 2.9E-148 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AYJ52_07740 fc9e21b4925a75fe2539a4ae17f66314 430 Pfam PF13393 Histidyl-tRNA synthetase 9 316 8.6E-45 T 11-10-2018 AYJ52_07740 fc9e21b4925a75fe2539a4ae17f66314 430 Gene3D G3DSA:3.30.930.10 2 328 5.4E-111 T 11-10-2018 AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 Pfam PF10502 Signal peptidase, peptidase S26 217 256 1.3E-5 T 11-10-2018 IPR019533 Peptidase S26 AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 ProSitePatterns PS00501 Signal peptidases I serine active site. 70 77 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 Gene3D G3DSA:2.10.109.10 59 258 4.2E-69 T 11-10-2018 AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 257 1.3E-49 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 ProSitePatterns PS00760 Signal peptidases I lysine active site. 127 139 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 Gene3D G3DSA:2.170.230.10 136 218 4.2E-69 T 11-10-2018 AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 SUPERFAMILY SSF51306 59 263 6.28E-67 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 Pfam PF00717 Peptidase S24-like 68 149 8.4E-22 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 61 77 2.3E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 125 137 2.3E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AYJ52_18625 e836549c4be81cf82d22e6fbe0b92b0f 275 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 219 238 2.3E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AYJ52_17950 9f8580a02a7f4461221657f48c81551b 288 SUPERFAMILY SSF53850 90 284 2.17E-21 T 11-10-2018 AYJ52_17950 9f8580a02a7f4461221657f48c81551b 288 Pfam PF03466 LysR substrate binding domain 90 281 1.2E-15 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_17950 9f8580a02a7f4461221657f48c81551b 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.4E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_17950 9f8580a02a7f4461221657f48c81551b 288 Gene3D G3DSA:3.40.190.290 92 281 7.4E-31 T 11-10-2018 AYJ52_17950 9f8580a02a7f4461221657f48c81551b 288 Gene3D G3DSA:1.10.10.10 3 88 3.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_17950 9f8580a02a7f4461221657f48c81551b 288 SUPERFAMILY SSF46785 4 81 1.02E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_10965 1199b1190d4e0432610374f5478bcf84 583 Pfam PF07519 Tannase and feruloyl esterase 91 583 1.1E-155 T 11-10-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 AYJ52_10965 1199b1190d4e0432610374f5478bcf84 583 SUPERFAMILY SSF53474 142 514 2.54E-14 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 509 648 2.5E-11 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 Gene3D G3DSA:1.10.1040.10 525 691 3.1E-27 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 186 3.0E-32 T 11-10-2018 AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.7E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.7E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.7E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 Gene3D G3DSA:3.40.50.720 247 470 1.4E-10 T 11-10-2018 AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 Gene3D G3DSA:1.10.150.240 22 93 2.5E-45 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 52 185 5.9E-14 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 SUPERFAMILY SSF56784 11 223 1.6E-43 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 Gene3D G3DSA:3.40.50.1000 12 194 2.5E-45 T 11-10-2018 IPR023214 HAD superfamily AYJ52_13790 10697173f2383bf15db112099ca3fe62 715 SUPERFAMILY SSF48179 520 651 8.16E-16 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_16790 40a9acfa3720b96f60bbe55a73ce0866 301 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 291 2.7E-85 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AYJ52_16790 40a9acfa3720b96f60bbe55a73ce0866 301 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 298 8.0E-89 T 11-10-2018 AYJ52_16790 40a9acfa3720b96f60bbe55a73ce0866 301 SUPERFAMILY SSF53335 63 290 1.28E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_16790 40a9acfa3720b96f60bbe55a73ce0866 301 PIRSF PIRSF000401 1 299 3.6E-85 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AYJ52_16790 40a9acfa3720b96f60bbe55a73ce0866 301 Gene3D G3DSA:3.40.50.150 102 300 8.2E-54 T 11-10-2018 AYJ52_16790 40a9acfa3720b96f60bbe55a73ce0866 301 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 297 31.899 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AYJ52_08480 47e9e7ef672108dda40df3c0e74bb89f 283 PIRSF PIRSF005052 2 283 3.4E-111 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AYJ52_08480 47e9e7ef672108dda40df3c0e74bb89f 283 Gene3D G3DSA:3.40.50.300 1 158 1.9E-5 T 11-10-2018 AYJ52_08480 47e9e7ef672108dda40df3c0e74bb89f 283 SUPERFAMILY SSF52540 3 157 6.9E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_08480 47e9e7ef672108dda40df3c0e74bb89f 283 Pfam PF03668 P-loop ATPase protein family 4 280 2.7E-86 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AYJ52_08480 47e9e7ef672108dda40df3c0e74bb89f 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 2 281 38.393 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AYJ52_05140 51d8a8a68a9698166b6bcd2de9f6028a 176 Pfam PF01252 Signal peptidase (SPase) II 24 165 3.7E-38 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AYJ52_05140 51d8a8a68a9698166b6bcd2de9f6028a 176 TIGRFAM TIGR00077 lspA: signal peptidase II 18 172 1.6E-41 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AYJ52_05140 51d8a8a68a9698166b6bcd2de9f6028a 176 ProSitePatterns PS00855 Signal peptidases II signature. 112 124 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AYJ52_05140 51d8a8a68a9698166b6bcd2de9f6028a 176 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 15 170 17.588 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AYJ52_05140 51d8a8a68a9698166b6bcd2de9f6028a 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 61 69 2.2E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AYJ52_05140 51d8a8a68a9698166b6bcd2de9f6028a 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 145 161 2.2E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AYJ52_05140 51d8a8a68a9698166b6bcd2de9f6028a 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 109 124 2.2E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AYJ52_14840 657aa005eb57ed557ae23409be2fd192 190 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 184 29.116 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AYJ52_14840 657aa005eb57ed557ae23409be2fd192 190 SUPERFAMILY SSF52218 1 178 5.53E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_14840 657aa005eb57ed557ae23409be2fd192 190 Gene3D G3DSA:3.40.50.360 1 185 2.2E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_14840 657aa005eb57ed557ae23409be2fd192 190 Pfam PF02525 Flavodoxin-like fold 1 179 6.5E-45 T 11-10-2018 IPR003680 Flavodoxin-like fold AYJ52_00165 24dd4f06f0024bb36d3010a0eb591c99 249 Gene3D G3DSA:3.40.50.620 1 247 8.5E-85 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_00165 24dd4f06f0024bb36d3010a0eb591c99 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 1.1E-45 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AYJ52_00165 24dd4f06f0024bb36d3010a0eb591c99 249 SUPERFAMILY SSF52402 1 242 6.84E-84 T 11-10-2018 AYJ52_00165 24dd4f06f0024bb36d3010a0eb591c99 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AYJ52_00165 24dd4f06f0024bb36d3010a0eb591c99 249 PIRSF PIRSF000090 1 249 4.3E-82 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AYJ52_00165 24dd4f06f0024bb36d3010a0eb591c99 249 SMART SM00893 23 211 6.3E-67 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AYJ52_17315 078b4b38d8c95851043085c38f08c862 348 Gene3D G3DSA:3.30.360.20 192 283 1.3E-109 T 11-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily AYJ52_17315 078b4b38d8c95851043085c38f08c862 348 Gene3D G3DSA:3.65.10.20 14 331 1.3E-109 T 11-10-2018 IPR037136 RNA 3'-terminal phosphate cyclase domain superfamily AYJ52_17315 078b4b38d8c95851043085c38f08c862 348 SUPERFAMILY SSF55205 11 189 3.86E-54 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AYJ52_17315 078b4b38d8c95851043085c38f08c862 348 Hamap MF_00200 RNA 3'-terminal phosphate cyclase [rtcA]. 11 336 33.674 T 11-10-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 AYJ52_17315 078b4b38d8c95851043085c38f08c862 348 SUPERFAMILY SSF52913 191 286 2.88E-17 T 11-10-2018 IPR036553 RNA 3'-terminal phosphate cyclase, insert domain superfamily AYJ52_17315 078b4b38d8c95851043085c38f08c862 348 PIRSF PIRSF005378 9 348 1.8E-95 T 11-10-2018 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 AYJ52_17315 078b4b38d8c95851043085c38f08c862 348 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 12 332 3.3E-103 T 11-10-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 AYJ52_17315 078b4b38d8c95851043085c38f08c862 348 Pfam PF01137 RNA 3'-terminal phosphate cyclase 19 333 1.9E-74 T 11-10-2018 IPR023797 RNA 3'-terminal phosphate cyclase domain AYJ52_19675 72a9b3e0db5e6f1f8abdb4d914a870de 96 Gene3D G3DSA:1.10.260.40 32 93 7.8E-6 T 11-10-2018 AYJ52_19675 72a9b3e0db5e6f1f8abdb4d914a870de 96 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 7 93 1.8E-38 T 11-10-2018 IPR014057 Uncharacterized protein HI1420 AYJ52_19675 72a9b3e0db5e6f1f8abdb4d914a870de 96 Pfam PF01381 Helix-turn-helix 47 92 6.0E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_19675 72a9b3e0db5e6f1f8abdb4d914a870de 96 SUPERFAMILY SSF47413 25 91 5.18E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 SUPERFAMILY SSF53901 5 262 6.28E-73 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 6 390 61.823 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 8 390 4.5E-191 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 PIRSF PIRSF000429 3 390 4.4E-124 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 388 1.1E-129 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 Pfam PF02803 Thiolase, C-terminal domain 265 389 2.0E-47 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 Pfam PF00108 Thiolase, N-terminal domain 9 257 3.5E-73 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 SUPERFAMILY SSF53901 266 389 9.26E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 Gene3D G3DSA:3.40.47.10 9 271 3.4E-142 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_06735 23b20cfc43d2ef9915a3e5913abe190e 390 Gene3D G3DSA:3.40.47.10 138 384 3.4E-142 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_13430 c0ba29308c69e607cb366c8ae4d8358a 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 186 4.9E-34 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AYJ52_07730 aed9712ef5deb846c0bdd8ecc23b0ac5 263 Pfam PF13464 Domain of unknown function (DUF4115) 190 261 3.3E-11 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 AYJ52_07730 aed9712ef5deb846c0bdd8ecc23b0ac5 263 Gene3D G3DSA:1.10.260.40 18 105 2.3E-21 T 11-10-2018 AYJ52_07730 aed9712ef5deb846c0bdd8ecc23b0ac5 263 Pfam PF13413 Helix-turn-helix domain 29 89 6.6E-18 T 11-10-2018 AYJ52_01290 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_01290 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_01290 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_01290 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_18870 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_18870 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_18870 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_18870 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_16270 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_16270 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_16270 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_16270 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_13195 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_13195 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_13195 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_13195 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_15150 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_15150 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_15150 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_15150 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_05125 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_05125 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_05125 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_05125 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_14495 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_14495 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_14495 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_14495 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_11695 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_11695 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_11695 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_11695 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_18395 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_18395 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_18395 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_18395 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_15780 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_15780 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_15780 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_15780 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_13005 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_13005 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_13005 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_13005 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_00120 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_00120 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_00120 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_00120 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_15240 7bdd81e0f71e2e59a2afd74f5bbdc168 261 SUPERFAMILY SSF53098 93 252 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_15240 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Gene3D G3DSA:3.30.420.10 93 246 2.1E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_15240 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13333 Integrase core domain 203 258 4.4E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_15240 7bdd81e0f71e2e59a2afd74f5bbdc168 261 Pfam PF13276 HTH-like domain 21 72 3.0E-17 T 11-10-2018 IPR025948 HTH-like domain AYJ52_13390 7d72046c1a6367f94d0443578a609053 345 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AYJ52_13390 7d72046c1a6367f94d0443578a609053 345 Gene3D G3DSA:3.20.20.70 1 345 1.7E-155 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_13390 7d72046c1a6367f94d0443578a609053 345 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 3.1E-91 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AYJ52_13390 7d72046c1a6367f94d0443578a609053 345 PIRSF PIRSF001359 1 329 1.8E-81 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AYJ52_13390 7d72046c1a6367f94d0443578a609053 345 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 4.4E-95 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AYJ52_13390 7d72046c1a6367f94d0443578a609053 345 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 344 9.1E-195 T 11-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AYJ52_13390 7d72046c1a6367f94d0443578a609053 345 SUPERFAMILY SSF51569 3 328 1.35E-104 T 11-10-2018 AYJ52_16850 d6d03d4508c7823306757b6fd2b70b12 400 SUPERFAMILY SSF103473 25 398 6.41E-33 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_16850 d6d03d4508c7823306757b6fd2b70b12 400 Gene3D G3DSA:1.20.1250.20 221 400 2.1E-6 T 11-10-2018 AYJ52_16850 d6d03d4508c7823306757b6fd2b70b12 400 Pfam PF07690 Major Facilitator Superfamily 27 348 4.5E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_16850 d6d03d4508c7823306757b6fd2b70b12 400 Gene3D G3DSA:1.20.1250.20 18 206 1.1E-17 T 11-10-2018 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 Gene3D G3DSA:3.30.930.10 1 250 1.9E-119 T 11-10-2018 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 SUPERFAMILY SSF55681 2 253 2.73E-105 T 11-10-2018 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 8.3E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 8.3E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 8.3E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 8.3E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 8.3E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 Pfam PF01411 tRNA synthetases class II (A) 5 551 7.9E-220 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 Gene3D G3DSA:2.40.30.130 459 550 4.2E-10 T 11-10-2018 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 Gene3D G3DSA:3.10.310.40 767 876 9.0E-26 T 11-10-2018 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 SUPERFAMILY SSF55186 551 713 1.14E-47 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 SUPERFAMILY SSF101353 254 450 1.44E-58 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 SUPERFAMILY SSF50447 452 550 2.83E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 Gene3D G3DSA:3.30.980.10 560 701 1.2E-49 T 11-10-2018 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 700 5.8E-17 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 857 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 SMART SM00863 651 700 2.6E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 193.147 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 Pfam PF02272 DHHA1 domain 743 874 9.9E-24 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AYJ52_11155 515b2c3ee1c64993b68d23b88e53cdb8 878 Gene3D G3DSA:3.30.54.20 622 681 1.2E-49 T 11-10-2018 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 SUPERFAMILY SSF48113 428 717 2.95E-97 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 260 283 2.4E-47 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 472 498 2.4E-47 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 2.4E-47 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 2.4E-47 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 2.4E-47 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 5.8E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 5.8E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 PRINTS PR00458 Haem peroxidase superfamily signature 252 267 5.8E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 5.8E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 PRINTS PR00458 Haem peroxidase superfamily signature 311 326 5.8E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 Gene3D G3DSA:1.10.520.10 424 717 4.2E-131 T 11-10-2018 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 Hamap MF_01961 Catalase-peroxidase [katG]. 2 718 38.233 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 SUPERFAMILY SSF48113 24 421 3.39E-135 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 Gene3D G3DSA:1.10.420.20 191 390 1.6E-205 T 11-10-2018 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 Gene3D G3DSA:1.10.420.10 570 693 4.2E-131 T 11-10-2018 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 21 717 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 Gene3D G3DSA:1.10.520.10 21 423 1.6E-205 T 11-10-2018 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 Pfam PF00141 Peroxidase 80 389 7.3E-48 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AYJ52_07265 1ab0847d3b23b57aa30b8f83f187ab64 718 Pfam PF00141 Peroxidase 395 691 9.0E-32 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 SUPERFAMILY SSF143724 122 323 2.35E-64 T 11-10-2018 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 Hamap MF_00347 Polyphosphate kinase [ppk]. 16 692 27.721 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 Pfam PF13090 Polyphosphate kinase C-terminal domain 340 688 1.3E-154 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 Gene3D G3DSA:3.30.1840.10 12 323 4.4E-102 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 18 689 2.9E-288 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 SUPERFAMILY SSF140356 16 119 2.09E-35 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 SUPERFAMILY SSF56024 326 502 9.03E-57 T 11-10-2018 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 PIRSF PIRSF015589 2 692 2.2E-279 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 SUPERFAMILY SSF56024 510 691 1.93E-72 T 11-10-2018 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 Pfam PF13089 Polyphosphate kinase N-terminal domain 19 124 2.4E-33 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 Pfam PF02503 Polyphosphate kinase middle domain 134 331 6.1E-61 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 Gene3D G3DSA:3.30.870.10 326 509 9.7E-71 T 11-10-2018 AYJ52_10380 138c108cd5c9d3242a93d0a4616281cb 692 Gene3D G3DSA:3.30.870.10 510 692 2.2E-68 T 11-10-2018 AYJ52_18710 a28e82e9d38c455ee5f43f1788545cda 236 Pfam PF13394 4Fe-4S single cluster domain 39 120 2.5E-11 T 11-10-2018 AYJ52_18710 a28e82e9d38c455ee5f43f1788545cda 236 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 236 8.1E-101 T 11-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE AYJ52_18710 a28e82e9d38c455ee5f43f1788545cda 236 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 233 35.306 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AYJ52_18710 a28e82e9d38c455ee5f43f1788545cda 236 Gene3D G3DSA:3.20.20.70 18 230 1.5E-33 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_18710 a28e82e9d38c455ee5f43f1788545cda 236 SUPERFAMILY SSF102114 41 119 1.05E-13 T 11-10-2018 AYJ52_18710 a28e82e9d38c455ee5f43f1788545cda 236 Pfam PF04055 Radical SAM superfamily 42 131 1.3E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_18710 a28e82e9d38c455ee5f43f1788545cda 236 PIRSF PIRSF000370 16 236 1.4E-63 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 Gene3D G3DSA:1.10.340.30 21 130 7.2E-84 T 11-10-2018 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 Gene3D G3DSA:1.10.1670.10 9 209 7.2E-84 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 ProSitePatterns PS01155 Endonuclease III family signature. 100 127 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 Pfam PF00633 Helix-hairpin-helix motif 99 125 7.4E-7 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 Gene3D G3DSA:3.90.79.10 223 344 2.3E-14 T 11-10-2018 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 Pfam PF14815 NUDIX domain 233 340 4.0E-21 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 SMART SM00525 189 209 1.1E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 SMART SM00478 39 188 9.1E-39 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 271 5.4E-108 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 SUPERFAMILY SSF55811 218 340 3.3E-20 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 167 1.7E-17 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AYJ52_04680 e22c10914e4c1643db9955e85b04820d 344 SUPERFAMILY SSF48150 6 223 2.67E-73 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AYJ52_10355 65ca194339770a5ced9c42cf26a6a9eb 207 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 192 3.1E-26 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain AYJ52_10355 65ca194339770a5ced9c42cf26a6a9eb 207 SUPERFAMILY SSF52266 27 205 4.89E-49 T 11-10-2018 AYJ52_10355 65ca194339770a5ced9c42cf26a6a9eb 207 Gene3D G3DSA:3.40.50.1110 25 207 1.1E-65 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AYJ52_10355 65ca194339770a5ced9c42cf26a6a9eb 207 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 29 39 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AYJ52_11850 04d5009de81506c6a554a18ffada310d 198 SUPERFAMILY SSF81342 6 182 7.85E-36 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AYJ52_11850 04d5009de81506c6a554a18ffada310d 198 Pfam PF01292 Prokaryotic cytochrome b561 13 179 1.7E-27 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AYJ52_01070 fc853aab8936812ce062d3a834c3191c 438 PIRSF PIRSF006060 1 435 1.5E-75 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_01070 fc853aab8936812ce062d3a834c3191c 438 Gene3D G3DSA:1.20.1740.10 1 435 3.2E-66 T 11-10-2018 AYJ52_01070 fc853aab8936812ce062d3a834c3191c 438 Pfam PF00324 Amino acid permease 1 399 2.5E-109 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_01070 fc853aab8936812ce062d3a834c3191c 438 ProSitePatterns PS00218 Amino acid permeases signature. 20 50 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_04765 7a9c861b2688325788e5f47d65e605e5 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_04765 7a9c861b2688325788e5f47d65e605e5 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_04765 7a9c861b2688325788e5f47d65e605e5 207 Gene3D G3DSA:1.10.10.60 7 63 8.0E-20 T 11-10-2018 AYJ52_04765 7a9c861b2688325788e5f47d65e605e5 207 SUPERFAMILY SSF48498 111 201 8.49E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_04765 7a9c861b2688325788e5f47d65e605e5 207 SUPERFAMILY SSF46689 10 73 1.5E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_04765 7a9c861b2688325788e5f47d65e605e5 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 62 3.2E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_04765 7a9c861b2688325788e5f47d65e605e5 207 Gene3D G3DSA:1.10.357.10 67 207 1.6E-20 T 11-10-2018 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 106 119 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 PIRSF PIRSF000185 8 422 1.6E-160 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 41 168 1.1E-55 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 SMART SM00839 189 419 5.3E-89 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 Gene3D G3DSA:3.40.50.720 187 422 1.5E-84 T 11-10-2018 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 220 240 2.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 98 112 2.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 178 200 2.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 347 358 2.8E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 187 419 2.3E-72 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 Gene3D G3DSA:3.40.50.10860 43 186 2.3E-64 T 11-10-2018 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 SUPERFAMILY SSF53223 8 189 2.3E-70 T 11-10-2018 AYJ52_02970 b04ef6167b50400a9284bb97ac324232 423 SUPERFAMILY SSF51735 187 422 5.8E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_10040 bab475eda0dfd3609a13d79f918de575 439 Pfam PF13520 Amino acid permease 6 408 3.6E-62 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_10040 bab475eda0dfd3609a13d79f918de575 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 436 3.0E-145 T 11-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AYJ52_10040 bab475eda0dfd3609a13d79f918de575 439 PIRSF PIRSF006060 2 439 3.3E-50 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_10040 bab475eda0dfd3609a13d79f918de575 439 Gene3D G3DSA:1.20.1740.10 2 439 3.2E-59 T 11-10-2018 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 Pfam PF14450 Cell division protein FtsA 208 377 7.3E-19 T 11-10-2018 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 Gene3D G3DSA:3.30.420.40 198 351 2.3E-83 T 11-10-2018 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 PIRSF PIRSF003101 1 420 1.6E-101 T 11-10-2018 IPR020823 Cell division protein FtsA AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 Gene3D G3DSA:3.90.640.10 236 299 2.3E-83 T 11-10-2018 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 9.8E-7 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 Gene3D G3DSA:3.30.420.40 11 375 2.3E-83 T 11-10-2018 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 Pfam PF14450 Cell division protein FtsA 9 174 9.2E-9 T 11-10-2018 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 Gene3D G3DSA:3.30.1490.110 83 170 2.3E-83 T 11-10-2018 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 420 22.187 T 11-10-2018 IPR020823 Cell division protein FtsA AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 SUPERFAMILY SSF53067 8 198 1.62E-36 T 11-10-2018 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 SMART SM00842 8 197 3.8E-61 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 SUPERFAMILY SSF53067 199 380 6.79E-35 T 11-10-2018 AYJ52_04125 feda7c918e0d745a30192a36ce11904d 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 380 1.2E-89 T 11-10-2018 IPR020823 Cell division protein FtsA AYJ52_09445 30b922c6f5f15a4e03b978661278da11 263 Pfam PF02616 Segregation and condensation protein ScpA 53 145 6.3E-14 T 11-10-2018 IPR003768 Segregation and condensation protein A AYJ52_09445 30b922c6f5f15a4e03b978661278da11 263 Pfam PF02616 Segregation and condensation protein ScpA 183 250 7.6E-6 T 11-10-2018 IPR003768 Segregation and condensation protein A AYJ52_13550 457ce645414e35a1afa40d9e8bf22376 502 SUPERFAMILY SSF51905 273 479 7.77E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_13550 457ce645414e35a1afa40d9e8bf22376 502 Gene3D G3DSA:3.50.50.60 1 209 6.0E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_13550 457ce645414e35a1afa40d9e8bf22376 502 SUPERFAMILY SSF51905 11 228 9.85E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_13550 457ce645414e35a1afa40d9e8bf22376 502 Pfam PF00743 Flavin-binding monooxygenase-like 12 346 3.0E-21 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AYJ52_13550 457ce645414e35a1afa40d9e8bf22376 502 Gene3D G3DSA:3.50.50.60 300 501 3.7E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14780 abd0eeed30d6494d533f42344e3df78e 144 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 140 2.5E-33 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 Gene3D G3DSA:2.40.30.10 330 434 6.8E-35 T 11-10-2018 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 SUPERFAMILY SSF50447 242 328 2.05E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 Gene3D G3DSA:3.40.50.300 1 239 5.9E-77 T 11-10-2018 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 496 52.214 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 Pfam PF00009 Elongation factor Tu GTP binding domain 24 213 3.1E-45 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 Gene3D G3DSA:2.40.30.10 240 327 5.7E-28 T 11-10-2018 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 SUPERFAMILY SSF52540 16 236 1.91E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 212 2.0E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 PRINTS PR00315 GTP-binding elongation factor signature 87 95 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 PRINTS PR00315 GTP-binding elongation factor signature 107 117 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 PRINTS PR00315 GTP-binding elongation factor signature 160 169 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 PRINTS PR00315 GTP-binding elongation factor signature 26 39 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 PRINTS PR00315 GTP-binding elongation factor signature 123 134 6.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 433 2.7E-197 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AYJ52_10435 9a5dc020de7d5f5a3b1b851071aa32e8 537 SUPERFAMILY SSF50465 333 433 2.83E-32 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AYJ52_12280 d3692dc289d9c173481eb73a2fbc6d7d 400 Pfam PF00005 ABC transporter 56 198 1.9E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_12280 d3692dc289d9c173481eb73a2fbc6d7d 400 Gene3D G3DSA:3.40.50.300 39 258 1.7E-64 T 11-10-2018 AYJ52_12280 d3692dc289d9c173481eb73a2fbc6d7d 400 Gene3D G3DSA:2.40.50.140 317 384 2.2E-12 T 11-10-2018 AYJ52_12280 d3692dc289d9c173481eb73a2fbc6d7d 400 SUPERFAMILY SSF50331 274 397 1.16E-9 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AYJ52_12280 d3692dc289d9c173481eb73a2fbc6d7d 400 Gene3D G3DSA:2.40.50.940 259 393 2.2E-12 T 11-10-2018 AYJ52_12280 d3692dc289d9c173481eb73a2fbc6d7d 400 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_12280 d3692dc289d9c173481eb73a2fbc6d7d 400 SUPERFAMILY SSF52540 41 279 3.41E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_12280 d3692dc289d9c173481eb73a2fbc6d7d 400 SMART SM00382 65 248 1.1E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 Pfam PF13437 HlyD family secretion protein 248 356 1.8E-17 T 11-10-2018 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 SUPERFAMILY SSF111369 73 124 7.19E-7 T 11-10-2018 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 Gene3D G3DSA:1.10.287.470 148 247 1.0E-17 T 11-10-2018 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 Gene3D G3DSA:1.10.287.470 98 126 1.2E-10 T 11-10-2018 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 ProSitePatterns PS00543 HlyD family secretion proteins signature. 363 385 - T 11-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 Gene3D G3DSA:2.40.50.100 248 284 1.0E-17 T 11-10-2018 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 Gene3D G3DSA:2.40.50.100 64 97 1.2E-10 T 11-10-2018 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 Pfam PF13533 Biotin-lipoyl like 70 102 4.9E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 Gene3D G3DSA:2.40.30.170 285 376 1.0E-17 T 11-10-2018 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 Gene3D G3DSA:2.40.30.170 52 62 1.2E-10 T 11-10-2018 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 293 317 4.2E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 363 378 4.2E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 4.2E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 4.2E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 340 4.2E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 378 398 4.2E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_11685 9b5c85cd3fbf409727a25cab7a77d74c 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 260 281 4.2E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 112 2.1E-33 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 SMART SM00846 2 162 1.6E-68 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 SUPERFAMILY SSF51735 2 190 4.93E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 167 322 3.4E-51 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 SUPERFAMILY SSF55347 162 323 6.85E-57 T 11-10-2018 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 160 167 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 Gene3D G3DSA:3.30.360.10 161 324 2.9E-127 T 11-10-2018 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 239 256 4.6E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 279 294 4.6E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 183 199 4.6E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 156 174 4.6E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 119 132 4.6E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 PIRSF PIRSF000149 1 339 9.4E-115 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_11160 c83465bb1008be9cd89d11cfba9482cd 339 Gene3D G3DSA:3.40.50.720 3 336 2.9E-127 T 11-10-2018 AYJ52_16580 11678b9579a552da6b5ebf0a989b9dfe 126 SMART SM00905 4 115 3.1E-37 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AYJ52_16580 11678b9579a552da6b5ebf0a989b9dfe 126 TIGRFAM TIGR00526 folB_dom: FolB domain 1 119 2.4E-27 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AYJ52_16580 11678b9579a552da6b5ebf0a989b9dfe 126 Gene3D G3DSA:3.30.1130.10 1 118 1.0E-32 T 11-10-2018 AYJ52_16580 11678b9579a552da6b5ebf0a989b9dfe 126 SUPERFAMILY SSF55620 1 117 2.11E-30 T 11-10-2018 AYJ52_16580 11678b9579a552da6b5ebf0a989b9dfe 126 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.1E-28 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AYJ52_16580 11678b9579a552da6b5ebf0a989b9dfe 126 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 114 2.1E-25 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AYJ52_08845 fa0e22ae4a899b340039a0b1782e0327 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 13 406 3.7E-125 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AYJ52_08845 fa0e22ae4a899b340039a0b1782e0327 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 31 404 1.0E-176 T 11-10-2018 AYJ52_08845 fa0e22ae4a899b340039a0b1782e0327 406 SUPERFAMILY SSF56266 14 403 1.7E-139 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AYJ52_08845 fa0e22ae4a899b340039a0b1782e0327 406 Gene3D G3DSA:3.60.70.12 7 276 2.8E-90 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AYJ52_08845 fa0e22ae4a899b340039a0b1782e0327 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 152.546 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AYJ52_08845 fa0e22ae4a899b340039a0b1782e0327 406 Pfam PF01960 ArgJ family 20 406 3.4E-143 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AYJ52_08845 fa0e22ae4a899b340039a0b1782e0327 406 Gene3D G3DSA:3.10.20.340 277 406 1.6E-44 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 Pfam PF00702 haloacid dehalogenase-like hydrolase 471 688 8.0E-40 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 477 483 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 Pfam PF04945 YHS domain 15 59 7.6E-11 T 11-10-2018 IPR007029 YHS domain AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 Gene3D G3DSA:3.40.50.1000 456 726 2.2E-89 T 11-10-2018 IPR023214 HAD superfamily AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 SUPERFAMILY SSF81653 280 373 1.02E-26 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 Gene3D G3DSA:2.70.150.20 266 378 1.4E-43 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 Pfam PF00122 E1-E2 ATPase 273 454 1.8E-55 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 181 784 1.6E-177 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 200 783 4.8E-188 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 SUPERFAMILY SSF81665 249 742 3.14E-13 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 245 752 4.3E-91 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 SMART SM00746 16 53 1.3E-8 T 11-10-2018 IPR011017 TRASH domain AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 SUPERFAMILY SSF56784 473 781 5.77E-54 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 Gene3D G3DSA:3.40.1110.10 486 606 2.2E-89 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 709 5.1E-29 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 323 337 5.1E-29 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 610 5.1E-29 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 631 5.1E-29 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 475 489 5.1E-29 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 674 693 5.1E-29 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00943 Copper-transporting ATPase signature 262 280 4.5E-15 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00943 Copper-transporting ATPase signature 651 668 4.5E-15 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00943 Copper-transporting ATPase signature 185 204 4.5E-15 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00943 Copper-transporting ATPase signature 396 410 4.5E-15 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00943 Copper-transporting ATPase signature 747 761 4.5E-15 T 11-10-2018 AYJ52_08275 4329de548011123c77ec5fba20db0fbe 785 PRINTS PR00943 Copper-transporting ATPase signature 458 473 4.5E-15 T 11-10-2018 AYJ52_04380 5788e2dd8dac4f7f6d44f6d8d76b9619 252 Gene3D G3DSA:3.40.190.10 27 250 8.5E-88 T 11-10-2018 AYJ52_04380 5788e2dd8dac4f7f6d44f6d8d76b9619 252 SUPERFAMILY SSF53850 25 250 2.07E-34 T 11-10-2018 AYJ52_04380 5788e2dd8dac4f7f6d44f6d8d76b9619 252 Gene3D G3DSA:3.40.190.10 105 214 8.5E-88 T 11-10-2018 AYJ52_04380 5788e2dd8dac4f7f6d44f6d8d76b9619 252 Pfam PF13531 Bacterial extracellular solute-binding protein 27 250 2.9E-33 T 11-10-2018 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 SUPERFAMILY SSF52343 187 332 2.23E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 1.3E-31 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 228 1.3E-31 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 193 202 1.3E-31 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 302 310 1.3E-31 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 156 1.3E-31 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 PRINTS PR00410 Phenol hydroxylase reductase family signature 234 243 1.3E-31 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 SUPERFAMILY SSF63380 105 199 1.33E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 Gene3D G3DSA:3.10.20.30 1 94 1.7E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 Gene3D G3DSA:3.40.50.80 200 339 6.4E-28 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 Gene3D G3DSA:2.40.30.10 104 199 1.9E-27 T 11-10-2018 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 Pfam PF00970 Oxidoreductase FAD-binding domain 107 198 4.7E-18 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 82 1.0E-17 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 SUPERFAMILY SSF54292 2 89 1.23E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_11370 3cec9cffb231b0a742101f3c9efff6a6 353 Pfam PF00175 Oxidoreductase NAD-binding domain 210 314 1.7E-15 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_01455 66c220efbb44cf1da5bd9a1339c501ed 313 SUPERFAMILY SSF52172 186 302 7.54E-38 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_01455 66c220efbb44cf1da5bd9a1339c501ed 313 SMART SM00260 13 159 5.5E-28 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AYJ52_01455 66c220efbb44cf1da5bd9a1339c501ed 313 Gene3D G3DSA:2.30.30.40 20 154 2.5E-35 T 11-10-2018 AYJ52_01455 66c220efbb44cf1da5bd9a1339c501ed 313 SMART SM00448 185 298 6.6E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_01455 66c220efbb44cf1da5bd9a1339c501ed 313 SUPERFAMILY SSF50341 20 157 7.98E-23 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AYJ52_01455 66c220efbb44cf1da5bd9a1339c501ed 313 Gene3D G3DSA:3.40.50.12740 184 309 5.3E-39 T 11-10-2018 AYJ52_01455 66c220efbb44cf1da5bd9a1339c501ed 313 Pfam PF01584 CheW-like domain 26 161 2.0E-22 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AYJ52_01455 66c220efbb44cf1da5bd9a1339c501ed 313 Pfam PF00072 Response regulator receiver domain 187 298 1.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_01455 66c220efbb44cf1da5bd9a1339c501ed 313 Gene3D G3DSA:2.40.50.180 44 113 2.5E-35 T 11-10-2018 AYJ52_04580 3c6e7a834f74ebea984d93ebc5d2026f 462 Pfam PF00324 Amino acid permease 17 451 3.2E-108 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_04580 3c6e7a834f74ebea984d93ebc5d2026f 462 PIRSF PIRSF006060 1 460 2.5E-80 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_04580 3c6e7a834f74ebea984d93ebc5d2026f 462 Gene3D G3DSA:1.20.1740.10 10 460 1.1E-63 T 11-10-2018 AYJ52_04580 3c6e7a834f74ebea984d93ebc5d2026f 462 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 Pfam PF00873 AcrB/AcrD/AcrF family 6 1036 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82693 41 135 1.15E-27 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.2090.10 730 818 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82693 681 866 5.75E-28 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:1.20.1640.10 11 521 0.0 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.2090.10 182 278 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82866 299 499 7.59E-51 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.70.1440 678 875 0.0 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:1.20.1640.10 522 1032 0.0 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82866 840 1035 5.75E-45 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.4E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.4E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 630 644 1.4E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.4E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 561 578 1.4E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.4E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.4E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.4E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.4E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82714 186 275 2.35E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 5 1047 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82693 574 680 8.2E-26 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82714 731 816 7.06E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 SUPERFAMILY SSF82693 138 332 7.15E-27 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.70.1430 41 826 0.0 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.70.1320 136 335 0.0 T 11-10-2018 AYJ52_06235 888088fcfafa290394fa6b010827b89e 1054 Gene3D G3DSA:3.30.70.1430 576 677 0.0 T 11-10-2018 AYJ52_05680 5c410a5d5c671a114e14844cee831aee 621 Gene3D G3DSA:3.40.50.1820 343 618 1.0E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_05680 5c410a5d5c671a114e14844cee831aee 621 SUPERFAMILY SSF53474 380 608 1.62E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_05680 5c410a5d5c671a114e14844cee831aee 621 SUPERFAMILY SSF51735 12 300 7.85E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_05680 5c410a5d5c671a114e14844cee831aee 621 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 227 5.3E-19 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AYJ52_05680 5c410a5d5c671a114e14844cee831aee 621 Pfam PF12697 Alpha/beta hydrolase family 385 601 3.3E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_05680 5c410a5d5c671a114e14844cee831aee 621 Gene3D G3DSA:3.40.50.720 13 328 5.2E-36 T 11-10-2018 AYJ52_03135 9db418289f9999f31c694697d4abd656 333 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03135 9db418289f9999f31c694697d4abd656 333 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 2.8E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03135 9db418289f9999f31c694697d4abd656 333 SUPERFAMILY SSF54523 13 113 2.83E-6 T 11-10-2018 AYJ52_03135 9db418289f9999f31c694697d4abd656 333 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 1.9E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03135 9db418289f9999f31c694697d4abd656 333 Pfam PF16074 Type IV Pilus-assembly protein W 181 327 7.1E-11 T 11-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 SUPERFAMILY SSF50447 271 411 3.53E-35 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 SMART SM00889 487 608 2.5E-63 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Gene3D G3DSA:2.40.30.10 300 412 2.0E-43 T 11-10-2018 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 SUPERFAMILY SSF52540 6 288 4.99E-104 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.6E-29 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 702 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Gene3D G3DSA:3.40.50.300 1 299 6.6E-111 T 11-10-2018 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Pfam PF00679 Elongation factor G C-terminus 610 696 3.1E-31 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Pfam PF03764 Elongation factor G, domain IV 486 607 3.0E-42 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 SUPERFAMILY SSF54980 613 701 1.68E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Gene3D G3DSA:3.30.70.240 614 685 5.9E-87 T 11-10-2018 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 SMART SM00838 610 698 5.8E-56 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 SUPERFAMILY SSF54211 489 609 4.55E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.8E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 PRINTS PR00315 GTP-binding elongation factor signature 85 95 5.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 PRINTS PR00315 GTP-binding elongation factor signature 137 146 5.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 PRINTS PR00315 GTP-binding elongation factor signature 101 112 5.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.0E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 111.569 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Gene3D G3DSA:3.30.230.10 491 697 5.9E-87 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 SUPERFAMILY SSF54980 409 486 2.63E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Pfam PF14492 Elongation Factor G, domain II 411 485 4.3E-35 T 11-10-2018 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Gene3D G3DSA:3.30.70.870 413 487 2.4E-33 T 11-10-2018 AYJ52_09710 e819e2e6f664c33489b4bd56671916ee 712 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.4E-64 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_01540 2e22497678064686a4227dbff298b512 372 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 1 355 2.6E-210 T 11-10-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 AYJ52_01540 2e22497678064686a4227dbff298b512 372 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 1 360 67.069 T 11-10-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 AYJ52_01540 2e22497678064686a4227dbff298b512 372 SUPERFAMILY SSF51679 1 357 2.36E-75 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AYJ52_01540 2e22497678064686a4227dbff298b512 372 Gene3D G3DSA:3.20.20.30 1 357 4.3E-79 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AYJ52_01540 2e22497678064686a4227dbff298b512 372 Pfam PF00296 Luciferase-like monooxygenase 1 321 1.4E-69 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AYJ52_11655 b264b29a075adab29ee88c2da9a4fc48 179 SUPERFAMILY SSF56784 10 171 7.59E-40 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_11655 b264b29a075adab29ee88c2da9a4fc48 179 Gene3D G3DSA:3.40.50.1000 2 176 3.1E-51 T 11-10-2018 IPR023214 HAD superfamily AYJ52_11655 b264b29a075adab29ee88c2da9a4fc48 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 88 147 3.1E-9 T 11-10-2018 AYJ52_11655 b264b29a075adab29ee88c2da9a4fc48 179 PIRSF PIRSF006118 1 175 1.6E-59 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AYJ52_11655 b264b29a075adab29ee88c2da9a4fc48 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 14 164 2.3E-46 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AYJ52_11655 b264b29a075adab29ee88c2da9a4fc48 179 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 15 127 8.5E-14 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AYJ52_11680 3f4c7592bb687c4d9f3e3266866a96b2 713 Gene3D G3DSA:1.20.1560.10 145 456 2.1E-62 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_11680 3f4c7592bb687c4d9f3e3266866a96b2 713 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 8 703 1.2E-259 T 11-10-2018 IPR017750 ATPase, type I secretion system AYJ52_11680 3f4c7592bb687c4d9f3e3266866a96b2 713 SUPERFAMILY SSF52540 464 701 4.1E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_11680 3f4c7592bb687c4d9f3e3266866a96b2 713 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_11680 3f4c7592bb687c4d9f3e3266866a96b2 713 Gene3D G3DSA:3.40.50.300 465 712 4.2E-70 T 11-10-2018 AYJ52_11680 3f4c7592bb687c4d9f3e3266866a96b2 713 SMART SM00382 500 686 4.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_11680 3f4c7592bb687c4d9f3e3266866a96b2 713 SUPERFAMILY SSF90123 141 456 3.66E-62 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_11680 3f4c7592bb687c4d9f3e3266866a96b2 713 Gene3D G3DSA:3.90.70.10 4 127 2.4E-11 T 11-10-2018 AYJ52_11680 3f4c7592bb687c4d9f3e3266866a96b2 713 Pfam PF00005 ABC transporter 495 640 2.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_11680 3f4c7592bb687c4d9f3e3266866a96b2 713 Pfam PF00664 ABC transporter transmembrane region 161 424 2.4E-31 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AYJ52_11560 5ea51cee685718d34afc8b7e56261352 214 Gene3D G3DSA:3.90.550.10 1 200 1.2E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_11560 5ea51cee685718d34afc8b7e56261352 214 SUPERFAMILY SSF53448 1 204 1.5E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_11560 5ea51cee685718d34afc8b7e56261352 214 Pfam PF00535 Glycosyl transferase family 2 5 131 1.4E-13 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AYJ52_06500 93dfd693e4b69d46e57a7eeae1629bfe 448 Pfam PF02321 Outer membrane efflux protein 245 431 6.9E-32 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_06500 93dfd693e4b69d46e57a7eeae1629bfe 448 Pfam PF02321 Outer membrane efflux protein 24 222 4.1E-23 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_06500 93dfd693e4b69d46e57a7eeae1629bfe 448 SUPERFAMILY SSF56954 2 435 4.32E-87 T 11-10-2018 AYJ52_06500 93dfd693e4b69d46e57a7eeae1629bfe 448 Gene3D G3DSA:1.20.1600.10 22 448 2.8E-99 T 11-10-2018 AYJ52_06500 93dfd693e4b69d46e57a7eeae1629bfe 448 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 445 2.3E-79 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AYJ52_11845 c06cc86434222cd7bdcc9bc8a1c65ccb 354 SMART SM01060 20 354 2.3E-4 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_11845 c06cc86434222cd7bdcc9bc8a1c65ccb 354 Gene3D G3DSA:2.40.180.20 65 322 1.6E-91 T 11-10-2018 AYJ52_11845 c06cc86434222cd7bdcc9bc8a1c65ccb 354 Pfam PF00199 Catalase 59 340 1.0E-19 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_11845 c06cc86434222cd7bdcc9bc8a1c65ccb 354 PIRSF PIRSF000296 12 343 1.2E-95 T 11-10-2018 IPR024168 Catalase, SrpA-type, predicted AYJ52_11845 c06cc86434222cd7bdcc9bc8a1c65ccb 354 Gene3D G3DSA:1.20.1280.120 55 336 1.6E-91 T 11-10-2018 AYJ52_11845 c06cc86434222cd7bdcc9bc8a1c65ccb 354 SUPERFAMILY SSF56634 30 341 4.84E-74 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 Gene3D G3DSA:3.20.20.60 621 950 1.7E-115 T 11-10-2018 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 Gene3D G3DSA:1.10.274.10 417 534 1.2E-56 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 2.1E-27 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 Pfam PF05524 PEP-utilising enzyme, N-terminal 399 515 4.5E-21 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 PRINTS PR00107 Phosphocarrier protein signature 335 352 1.0E-8 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 PRINTS PR00107 Phosphocarrier protein signature 294 310 1.0E-8 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 PRINTS PR00107 Phosphocarrier protein signature 320 335 1.0E-8 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 SUPERFAMILY SSF55594 284 370 3.14E-17 T 11-10-2018 IPR035895 HPr-like superfamily AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 Gene3D G3DSA:3.30.1340.10 283 370 1.1E-18 T 11-10-2018 IPR035895 HPr-like superfamily AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 Gene3D G3DSA:3.40.930.10 1 141 3.0E-35 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 828 846 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 SUPERFAMILY SSF47831 417 532 2.48E-24 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 285 361 5.9E-14 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 638 922 9.7E-105 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 Gene3D G3DSA:3.50.30.10 400 620 1.2E-56 T 11-10-2018 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 571 582 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 Pfam PF00381 PTS HPr component phosphorylation site 285 360 2.0E-16 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 SUPERFAMILY SSF55804 147 274 1.05E-8 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 400 945 1.3E-150 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 294 301 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 SUPERFAMILY SSF55804 4 139 2.88E-34 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 SUPERFAMILY SSF51621 640 928 1.2E-99 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 SUPERFAMILY SSF52009 514 630 7.85E-29 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 Pfam PF00391 PEP-utilising enzyme, mobile domain 540 612 3.2E-18 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 680 699 5.5E-19 T 11-10-2018 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 845 860 5.5E-19 T 11-10-2018 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 881 893 5.5E-19 T 11-10-2018 AYJ52_15530 0d18b2f7b1afd74ec6c95afc24153785 950 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 828 843 5.5E-19 T 11-10-2018 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 41.456 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 Gene3D G3DSA:3.30.930.10 105 423 6.4E-120 T 11-10-2018 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 1.2E-40 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 8.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 8.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 8.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 8.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 8.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 PIRSF PIRSF001529 1 423 1.3E-185 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.2E-30 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 1.0E-175 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 SUPERFAMILY SSF55681 116 417 1.71E-103 T 11-10-2018 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 SUPERFAMILY SSF46589 1 112 1.1E-30 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AYJ52_00875 992fe62631e149a52479b1c7b15da97a 423 Gene3D G3DSA:1.10.287.40 1 104 6.3E-24 T 11-10-2018 AYJ52_06195 2c7eff78f4d7c6686069dafac4fbfb99 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AYJ52_06195 2c7eff78f4d7c6686069dafac4fbfb99 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.8E-8 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AYJ52_06195 2c7eff78f4d7c6686069dafac4fbfb99 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.8E-8 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AYJ52_06195 2c7eff78f4d7c6686069dafac4fbfb99 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.8E-8 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AYJ52_06195 2c7eff78f4d7c6686069dafac4fbfb99 112 Gene3D G3DSA:3.10.20.30 1 112 6.6E-34 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_06195 2c7eff78f4d7c6686069dafac4fbfb99 112 SUPERFAMILY SSF54292 4 106 2.69E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_06195 2c7eff78f4d7c6686069dafac4fbfb99 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 9.8E-49 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AYJ52_06195 2c7eff78f4d7c6686069dafac4fbfb99 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 92 2.0E-10 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AYJ52_00220 d207ba8069da180637ddfe48cf56beed 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 8.1E-12 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_00220 d207ba8069da180637ddfe48cf56beed 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 77 90 8.1E-12 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_00220 d207ba8069da180637ddfe48cf56beed 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 29 39 8.1E-12 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_00220 d207ba8069da180637ddfe48cf56beed 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 95 112 8.1E-12 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_00220 d207ba8069da180637ddfe48cf56beed 324 Gene3D G3DSA:3.30.930.10 1 324 7.0E-93 T 11-10-2018 AYJ52_00220 d207ba8069da180637ddfe48cf56beed 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 319 4.6E-118 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AYJ52_00220 d207ba8069da180637ddfe48cf56beed 324 SUPERFAMILY SSF55681 10 321 2.39E-66 T 11-10-2018 AYJ52_00220 d207ba8069da180637ddfe48cf56beed 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 321 1.3E-38 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 SUPERFAMILY SSF82693 39 131 2.09E-26 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 Gene3D G3DSA:3.30.2090.10 718 806 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 SUPERFAMILY SSF82693 669 844 3.14E-12 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 SUPERFAMILY SSF82693 137 331 2.44E-21 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 SUPERFAMILY SSF82693 562 668 5.07E-21 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 Pfam PF00873 AcrB/AcrD/AcrF family 3 1021 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 Gene3D G3DSA:3.30.70.1430 564 665 0.0 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 Gene3D G3DSA:1.20.1640.10 9 509 0.0 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 SUPERFAMILY SSF82866 297 498 6.67E-50 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 SUPERFAMILY SSF82714 183 273 4.45E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 SUPERFAMILY SSF82866 828 1021 1.57E-41 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 Gene3D G3DSA:3.30.70.1430 39 814 0.0 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 SUPERFAMILY SSF82714 721 804 5.89E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 Gene3D G3DSA:3.30.70.1440 666 861 0.0 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1029 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 7.0E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 7.0E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 7.0E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 7.0E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 7.0E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 7.0E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 7.0E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 7.0E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 7.0E-100 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 11-10-2018 AYJ52_00325 920f53ea3637151e43c196694deb7223 1031 Gene3D G3DSA:1.20.1640.10 510 1018 0.0 T 11-10-2018 AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 Gene3D G3DSA:3.40.50.300 12 176 1.7E-103 T 11-10-2018 AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 SUPERFAMILY SSF48019 242 363 3.23E-26 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 Gene3D G3DSA:1.20.272.10 241 361 9.1E-32 T 11-10-2018 AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 231 365 1.3E-26 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 SUPERFAMILY SSF52540 33 222 2.4E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 40 58 2.1E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 2.1E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 355 1.1E-133 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 SMART SM00382 36 177 3.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 Gene3D G3DSA:1.10.8.60 7 239 1.7E-103 T 11-10-2018 AYJ52_16060 366e81dd30e1f9730473c81d75871cb9 713 Pfam PF13177 DNA polymerase III, delta subunit 19 177 1.6E-40 T 11-10-2018 AYJ52_15695 ff9364b9c50785681c79b67bf75282a4 184 Gene3D G3DSA:3.30.1360.40 31 104 3.5E-60 T 11-10-2018 AYJ52_15695 ff9364b9c50785681c79b67bf75282a4 184 Gene3D G3DSA:1.10.132.20 12 181 3.5E-60 T 11-10-2018 AYJ52_15695 ff9364b9c50785681c79b67bf75282a4 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 184 25.09 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AYJ52_15695 ff9364b9c50785681c79b67bf75282a4 184 SUPERFAMILY SSF55194 1 184 1.09E-64 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 AYJ52_15695 ff9364b9c50785681c79b67bf75282a4 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 184 2.1E-63 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AYJ52_15695 ff9364b9c50785681c79b67bf75282a4 184 Pfam PF01765 Ribosome recycling factor 24 182 8.6E-58 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AYJ52_14395 598115d1fb23dd037b6937dc5b11c7a8 336 Gene3D G3DSA:2.60.40.3310 23 189 1.2E-45 T 11-10-2018 AYJ52_14395 598115d1fb23dd037b6937dc5b11c7a8 336 Pfam PF00419 Fimbrial protein 183 335 2.0E-16 T 11-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AYJ52_14395 598115d1fb23dd037b6937dc5b11c7a8 336 SUPERFAMILY SSF49401 188 336 1.89E-21 T 11-10-2018 IPR008966 Adhesion domain superfamily AYJ52_14395 598115d1fb23dd037b6937dc5b11c7a8 336 Gene3D G3DSA:2.60.40.1090 190 336 2.5E-24 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AYJ52_14245 9946f3f3bb303d67deef25bf1f8a7b25 116 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 86 1.7E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14245 9946f3f3bb303d67deef25bf1f8a7b25 116 Gene3D G3DSA:1.10.10.10 1 115 7.7E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14245 9946f3f3bb303d67deef25bf1f8a7b25 116 SUPERFAMILY SSF46785 5 105 9.52E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_01550 a0b66618a4c6d368324d238db4179d08 127 Gene3D G3DSA:3.30.1330.40 1 126 1.4E-40 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_01550 a0b66618a4c6d368324d238db4179d08 127 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 5.9E-74 T 11-10-2018 IPR019898 Putative aminoacrylate peracid reductase RutC AYJ52_01550 a0b66618a4c6d368324d238db4179d08 127 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 127 41.383 T 11-10-2018 IPR019898 Putative aminoacrylate peracid reductase RutC AYJ52_01550 a0b66618a4c6d368324d238db4179d08 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 AYJ52_01550 a0b66618a4c6d368324d238db4179d08 127 Pfam PF01042 Endoribonuclease L-PSP 13 125 4.9E-33 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AYJ52_01550 a0b66618a4c6d368324d238db4179d08 127 SUPERFAMILY SSF55298 1 127 2.67E-36 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 Pfam PF02142 MGS-like domain 15 128 5.1E-30 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 SMART SM00851 15 128 1.3E-61 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 SUPERFAMILY SSF52335 3 192 8.11E-72 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 455 5.1E-119 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 Gene3D G3DSA:3.40.140.20 209 365 2.4E-55 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 524 45.781 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 Gene3D G3DSA:3.40.140.20 387 524 7.8E-62 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 SUPERFAMILY SSF53927 212 524 2.11E-129 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 SMART SM00798 133 456 1.8E-210 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 524 3.4E-242 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 PIRSF PIRSF000414 1 524 8.8E-224 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_16805 13d32ee70f6dc6d2b4b83cee27124a17 524 Gene3D G3DSA:3.40.50.1380 1 195 7.0E-86 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 448 763 1.5E-92 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Gene3D G3DSA:3.30.470.130 1 445 7.9E-179 T 11-10-2018 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 SUPERFAMILY SSF52440 1 111 4.03E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 SUPERFAMILY SSF160467 798 890 1.18E-20 T 11-10-2018 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 318 5.8E-64 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.1E-45 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 471 741 8.5E-85 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Gene3D G3DSA:2.40.100.10 880 1103 5.2E-96 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Gene3D G3DSA:3.30.1360.40 781 876 4.0E-30 T 11-10-2018 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 SUPERFAMILY SSF51230 1124 1197 5.63E-17 T 11-10-2018 IPR011053 Single hybrid motif AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 SMART SM00878 335 439 2.0E-45 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 SMART SM00796 797 1030 2.2E-110 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Pfam PF00364 Biotin-requiring enzyme 1138 1197 2.5E-11 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 SUPERFAMILY SSF50891 914 1046 6.83E-26 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 SUPERFAMILY SSF50891 622 747 5.69E-32 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Gene3D G3DSA:2.40.100.10 621 774 1.2E-59 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Gene3D G3DSA:2.40.50.100 1130 1197 3.5E-20 T 11-10-2018 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1197 0.0 T 11-10-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Pfam PF02785 Biotin carboxylase C-terminal domain 335 439 3.6E-32 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 798 1019 2.1E-49 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 SUPERFAMILY SSF51246 329 441 1.05E-32 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 SUPERFAMILY SSF56059 83 348 1.94E-61 T 11-10-2018 AYJ52_11965 944278f331388fe1443ef47063d1851a 1201 SMART SM00797 470 758 5.0E-163 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Gene3D G3DSA:3.30.930.10 488 688 3.5E-51 T 11-10-2018 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 SMART SM00896 698 791 9.5E-40 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 SUPERFAMILY SSF46955 404 475 5.68E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Gene3D G3DSA:3.50.40.10 197 393 1.6E-74 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 SUPERFAMILY SSF55681 467 687 5.96E-47 T 11-10-2018 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Pfam PF01588 Putative tRNA binding domain 45 145 5.4E-28 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 SUPERFAMILY SSF50249 38 197 8.32E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 SMART SM00873 211 384 5.9E-93 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Gene3D G3DSA:3.30.56.10 400 474 3.4E-22 T 11-10-2018 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Gene3D G3DSA:2.40.50.140 39 154 4.4E-73 T 11-10-2018 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Gene3D G3DSA:3.30.70.380 699 792 3.1E-28 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 SUPERFAMILY SSF56037 208 393 6.54E-70 T 11-10-2018 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 3.0E-264 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Gene3D G3DSA:3.30.56.10 7 180 4.4E-73 T 11-10-2018 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 SMART SM00874 402 471 1.1E-24 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 8.8E-27 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 SUPERFAMILY SSF54991 694 791 2.88E-29 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.2E-17 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Pfam PF03483 B3/4 domain 212 384 1.4E-67 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AYJ52_08560 75d4f1d68487b92668e9d1b4e94b8a81 793 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 44.867 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AYJ52_14750 4ccf60a5dd1ee196da89947570483cef 422 SUPERFAMILY SSF56935 76 412 1.6E-24 T 11-10-2018 AYJ52_00940 5df26287c5f72f05f5be42f9d4f68033 144 Gene3D G3DSA:3.10.450.50 3 138 1.8E-20 T 11-10-2018 AYJ52_00940 5df26287c5f72f05f5be42f9d4f68033 144 SUPERFAMILY SSF54427 3 129 2.45E-20 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_00940 5df26287c5f72f05f5be42f9d4f68033 144 Pfam PF13577 SnoaL-like domain 4 122 9.6E-13 T 11-10-2018 IPR037401 SnoaL-like domain AYJ52_12865 b63e78845c026307b3e63998a464717a 237 SUPERFAMILY SSF52218 20 226 6.52E-63 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_12865 b63e78845c026307b3e63998a464717a 237 Gene3D G3DSA:3.40.50.360 3 237 9.0E-77 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_12865 b63e78845c026307b3e63998a464717a 237 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 11 225 1.3E-116 T 11-10-2018 IPR014063 Arsenate resistance ArsH AYJ52_12865 b63e78845c026307b3e63998a464717a 237 Pfam PF03358 NADPH-dependent FMN reductase 33 176 1.7E-26 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AYJ52_11105 06417ae3336245d912d86f33ead5edb9 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 2.1E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_11105 06417ae3336245d912d86f33ead5edb9 206 SUPERFAMILY SSF46689 4 81 1.7E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11105 06417ae3336245d912d86f33ead5edb9 206 Gene3D G3DSA:1.10.357.10 11 198 4.0E-19 T 11-10-2018 AYJ52_11105 06417ae3336245d912d86f33ead5edb9 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AYJ52_04950 1b5c48310b4671c344c43c5283ff8764 326 Pfam PF01545 Cation efflux family 26 239 5.2E-39 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_04950 1b5c48310b4671c344c43c5283ff8764 326 Gene3D G3DSA:1.20.1510.10 20 239 7.4E-31 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_04950 1b5c48310b4671c344c43c5283ff8764 326 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 314 3.8E-66 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_04950 1b5c48310b4671c344c43c5283ff8764 326 SUPERFAMILY SSF161111 19 240 7.85E-48 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 7.0E-27 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 Gene3D G3DSA:2.30.30.30 1 65 3.4E-29 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 SUPERFAMILY SSF50249 132 189 6.85E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 PIRSF PIRSF005901 2 189 3.6E-63 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 Hamap MF_00141 Elongation factor P [efp]. 3 189 48.755 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 SMART SM01185 69 125 5.0E-24 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 Gene3D G3DSA:2.40.50.140 132 189 9.5E-27 T 11-10-2018 AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 189 6.1E-76 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 SMART SM00841 133 188 1.2E-30 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 125 2.7E-20 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 Pfam PF09285 Elongation factor P, C-terminal 133 188 3.4E-24 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 SUPERFAMILY SSF50104 2 63 4.96E-22 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 SUPERFAMILY SSF50249 69 130 1.41E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_18125 2b2ef01a4c73f9f5b83f81e7077b12b9 189 Gene3D G3DSA:2.40.50.140 66 131 1.5E-27 T 11-10-2018 AYJ52_10920 0241455c156b8a43688e883c4ffcc6e8 488 PIRSF PIRSF036492 3 486 4.4E-160 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AYJ52_10920 0241455c156b8a43688e883c4ffcc6e8 488 Pfam PF00171 Aldehyde dehydrogenase family 3 449 1.7E-80 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_10920 0241455c156b8a43688e883c4ffcc6e8 488 Gene3D G3DSA:3.40.309.10 227 429 2.3E-149 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_10920 0241455c156b8a43688e883c4ffcc6e8 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 223 230 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_10920 0241455c156b8a43688e883c4ffcc6e8 488 Gene3D G3DSA:3.40.605.10 25 449 2.3E-149 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_10920 0241455c156b8a43688e883c4ffcc6e8 488 SUPERFAMILY SSF53720 9 474 4.84E-108 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_10920 0241455c156b8a43688e883c4ffcc6e8 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 251 262 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 Gene3D G3DSA:2.160.10.10 225 453 7.4E-72 T 11-10-2018 AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 392 426 3.7E-9 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 SUPERFAMILY SSF53448 1 249 3.34E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 7.1E-195 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 Pfam PF12804 MobA-like NTP transferase domain 5 123 1.0E-19 T 11-10-2018 IPR025877 MobA-like NTP transferase AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.879 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 2.7E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 262 296 4.2E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 SUPERFAMILY SSF51161 252 433 1.34E-50 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_04465 fa8c962d58d67a8a4469d31f5d323ee3 454 Gene3D G3DSA:3.90.550.10 1 224 7.7E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_13155 5d31b4ca3fd46a93d8f8ad998261cdaa 332 SMART SM00342 244 326 1.2E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_13155 5d31b4ca3fd46a93d8f8ad998261cdaa 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 326 4.9E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_13155 5d31b4ca3fd46a93d8f8ad998261cdaa 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 310 4.9E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_13155 5d31b4ca3fd46a93d8f8ad998261cdaa 332 Pfam PF12833 Helix-turn-helix domain 250 328 1.9E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_13155 5d31b4ca3fd46a93d8f8ad998261cdaa 332 SUPERFAMILY SSF46689 280 328 6.72E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_13155 5d31b4ca3fd46a93d8f8ad998261cdaa 332 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 198 1.3E-29 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_13155 5d31b4ca3fd46a93d8f8ad998261cdaa 332 Gene3D G3DSA:1.10.10.60 222 332 4.0E-22 T 11-10-2018 AYJ52_18490 1a99d83b70bf936d9d97a66995c183ec 341 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 2.7E-101 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AYJ52_18490 1a99d83b70bf936d9d97a66995c183ec 341 SUPERFAMILY SSF51395 10 318 1.43E-89 T 11-10-2018 AYJ52_18490 1a99d83b70bf936d9d97a66995c183ec 341 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 48.401 T 11-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AYJ52_18490 1a99d83b70bf936d9d97a66995c183ec 341 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AYJ52_18490 1a99d83b70bf936d9d97a66995c183ec 341 PIRSF PIRSF006621 1 327 2.4E-103 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AYJ52_18490 1a99d83b70bf936d9d97a66995c183ec 341 Gene3D G3DSA:1.10.1200.80 251 326 1.7E-14 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AYJ52_18490 1a99d83b70bf936d9d97a66995c183ec 341 Gene3D G3DSA:3.20.20.70 6 249 4.4E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_18490 1a99d83b70bf936d9d97a66995c183ec 341 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 6.5E-120 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AYJ52_09420 0d8da1bb3a06cef6feb584dac70dd114 385 Gene3D G3DSA:3.40.640.10 56 292 2.7E-111 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_09420 0d8da1bb3a06cef6feb584dac70dd114 385 SUPERFAMILY SSF53383 4 385 7.07E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_09420 0d8da1bb3a06cef6feb584dac70dd114 385 Gene3D G3DSA:3.90.1150.10 40 382 2.7E-111 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_09420 0d8da1bb3a06cef6feb584dac70dd114 385 Pfam PF00155 Aminotransferase class I and II 39 383 4.6E-52 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_09420 0d8da1bb3a06cef6feb584dac70dd114 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 SMART SM00322 554 619 3.1E-13 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 322 2.5E-21 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Pfam PF03725 3' exoribonuclease family, domain 2 461 529 1.7E-5 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 5.0E-14 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 SUPERFAMILY SSF55666 146 235 1.82E-29 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 SUPERFAMILY SSF55666 452 550 2.1E-28 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Gene3D G3DSA:2.40.50.140 624 696 2.3E-29 T 11-10-2018 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Pfam PF00013 KH domain 559 615 2.5E-12 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 SUPERFAMILY SSF50249 622 695 1.17E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 SUPERFAMILY SSF54211 295 490 6.58E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 PIRSF PIRSF005499 3 697 5.2E-285 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 SUPERFAMILY SSF54791 558 642 5.69E-23 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 SMART SM00316 622 692 2.7E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 29.914 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Pfam PF00575 S1 RNA binding domain 621 692 1.5E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 SUPERFAMILY SSF54211 3 145 6.07E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Pfam PF01138 3' exoribonuclease family, domain 1 18 145 4.4E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 1.0E-19 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Gene3D G3DSA:3.30.230.70 234 551 7.0E-112 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Gene3D G3DSA:3.30.230.70 1 229 5.5E-75 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AYJ52_07025 a90a0e55dc4885906128a0db60a61afb 697 Gene3D G3DSA:3.30.1370.10 552 623 9.2E-20 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AYJ52_13880 3aa93d3343212605b2357c7fdaddd212 137 SUPERFAMILY SSF54197 1 137 2.32E-40 T 11-10-2018 IPR036265 HIT-like superfamily AYJ52_13880 3aa93d3343212605b2357c7fdaddd212 137 PRINTS PR00332 Histidine triad family signature 29 47 1.9E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AYJ52_13880 3aa93d3343212605b2357c7fdaddd212 137 PRINTS PR00332 Histidine triad family signature 8 24 1.9E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AYJ52_13880 3aa93d3343212605b2357c7fdaddd212 137 PRINTS PR00332 Histidine triad family signature 96 106 1.9E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AYJ52_13880 3aa93d3343212605b2357c7fdaddd212 137 Gene3D G3DSA:3.30.428.10 1 137 1.1E-38 T 11-10-2018 IPR036265 HIT-like superfamily AYJ52_13880 3aa93d3343212605b2357c7fdaddd212 137 Pfam PF01230 HIT domain 14 109 5.3E-27 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 SUPERFAMILY SSF51556 129 566 3.55E-200 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 Pfam PF01979 Amidohydrolase family 124 453 1.5E-80 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 SUPERFAMILY SSF51338 2 176 3.12E-62 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 3.4E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 3.4E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 400 415 3.4E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 426 439 3.4E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 11-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 566 1.6E-299 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 2.6E-55 T 11-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 SUPERFAMILY SSF51338 423 476 9.39E-7 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 Gene3D G3DSA:2.30.40.10 3 479 1.4E-298 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 ProSitePatterns PS00145 Urease active site. 316 332 - T 11-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 Gene3D G3DSA:3.20.20.140 128 566 1.4E-298 T 11-10-2018 AYJ52_10495 d8699a80d287dd6bd35757cc9d2d1d9d 566 Hamap MF_01953 Urease subunit alpha [ureC]. 1 566 57.266 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_19590 cb5d4ddeffceb7f6876d4d6a9aad20ba 504 SUPERFAMILY SSF103473 7 495 3.01E-56 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_19590 cb5d4ddeffceb7f6876d4d6a9aad20ba 504 Gene3D G3DSA:1.20.1250.20 259 501 9.7E-11 T 11-10-2018 AYJ52_19590 cb5d4ddeffceb7f6876d4d6a9aad20ba 504 Pfam PF07690 Major Facilitator Superfamily 18 409 3.1E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_19590 cb5d4ddeffceb7f6876d4d6a9aad20ba 504 Gene3D G3DSA:1.20.1720.10 12 239 2.4E-39 T 11-10-2018 AYJ52_19590 cb5d4ddeffceb7f6876d4d6a9aad20ba 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 76 98 2.0E-7 T 11-10-2018 AYJ52_19590 cb5d4ddeffceb7f6876d4d6a9aad20ba 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 400 419 2.0E-7 T 11-10-2018 AYJ52_19590 cb5d4ddeffceb7f6876d4d6a9aad20ba 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 163 187 2.0E-7 T 11-10-2018 AYJ52_19590 cb5d4ddeffceb7f6876d4d6a9aad20ba 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 2.0E-7 T 11-10-2018 AYJ52_07770 18f31f80341b3a75414a9c787c54aab6 86 Gene3D G3DSA:1.10.1200.10 3 86 1.0E-19 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_07770 18f31f80341b3a75414a9c787c54aab6 86 Pfam PF00550 Phosphopantetheine attachment site 6 80 1.0E-8 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AYJ52_07770 18f31f80341b3a75414a9c787c54aab6 86 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 38 80 0.004 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AYJ52_07770 18f31f80341b3a75414a9c787c54aab6 86 SUPERFAMILY SSF47336 2 83 1.18E-12 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_17835 8e7bcee854cc98eefaab226a91ba6eaf 536 Gene3D G3DSA:3.40.50.300 320 534 7.1E-51 T 11-10-2018 AYJ52_17835 8e7bcee854cc98eefaab226a91ba6eaf 536 SUPERFAMILY SSF52540 326 528 1.16E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17835 8e7bcee854cc98eefaab226a91ba6eaf 536 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_17835 8e7bcee854cc98eefaab226a91ba6eaf 536 SUPERFAMILY SSF90123 15 313 9.94E-28 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_17835 8e7bcee854cc98eefaab226a91ba6eaf 536 Pfam PF00664 ABC transporter transmembrane region 18 272 6.3E-10 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AYJ52_17835 8e7bcee854cc98eefaab226a91ba6eaf 536 SMART SM00382 353 530 1.2E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_17835 8e7bcee854cc98eefaab226a91ba6eaf 536 Pfam PF00005 ABC transporter 344 482 1.9E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_17835 8e7bcee854cc98eefaab226a91ba6eaf 536 Gene3D G3DSA:1.20.1560.10 13 313 3.5E-21 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_15370 01cc620d4d95ae01c7b124ea63842ecb 513 SUPERFAMILY SSF53686 8 363 1.13E-94 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_15370 01cc620d4d95ae01c7b124ea63842ecb 513 Gene3D G3DSA:3.40.1020.10 336 513 2.9E-64 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AYJ52_15370 01cc620d4d95ae01c7b124ea63842ecb 513 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 314 1.9E-76 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_15370 01cc620d4d95ae01c7b124ea63842ecb 513 Gene3D G3DSA:3.40.50.1100 14 325 2.3E-129 T 11-10-2018 AYJ52_15370 01cc620d4d95ae01c7b124ea63842ecb 513 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 512 2.6E-215 T 11-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AYJ52_15370 01cc620d4d95ae01c7b124ea63842ecb 513 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 417 1.9E-23 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AYJ52_15370 01cc620d4d95ae01c7b124ea63842ecb 513 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 423 512 9.3E-24 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AYJ52_15370 01cc620d4d95ae01c7b124ea63842ecb 513 SUPERFAMILY SSF55021 418 512 1.01E-24 T 11-10-2018 AYJ52_15370 01cc620d4d95ae01c7b124ea63842ecb 513 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AYJ52_15370 01cc620d4d95ae01c7b124ea63842ecb 513 Gene3D G3DSA:3.40.50.1100 50 146 2.3E-129 T 11-10-2018 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 SMART SM00388 332 396 2.3E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 441 550 2.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 Gene3D G3DSA:1.10.287.130 338 397 1.7E-10 T 11-10-2018 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 SMART SM00304 279 331 4.5E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 SMART SM00387 440 552 2.5E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 Pfam PF00512 His Kinase A (phospho-acceptor) domain 332 395 1.0E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 SUPERFAMILY SSF47384 316 397 1.35E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 491 1.7E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 530 1.7E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 505 1.7E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 SUPERFAMILY SSF158472 281 327 8.5E-8 T 11-10-2018 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 Gene3D G3DSA:3.30.565.10 403 552 3.5E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 Gene3D G3DSA:1.20.1480.50 247 337 6.4E-10 T 11-10-2018 AYJ52_01870 314c1f68d2e1ff23b014e0cf819cb451 552 SUPERFAMILY SSF55874 386 549 5.24E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 SUPERFAMILY SSF51735 3 227 1.21E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 Pfam PF00106 short chain dehydrogenase 3 187 2.0E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18585 537da89bc02c578fde545165bdc856b2 252 Gene3D G3DSA:3.40.50.720 2 238 1.4E-59 T 11-10-2018 AYJ52_07440 35f23612b2d2d1ee529622c1159a273b 79 SMART SM00360 2 75 3.9E-24 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AYJ52_07440 35f23612b2d2d1ee529622c1159a273b 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 71 3.8E-20 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AYJ52_07440 35f23612b2d2d1ee529622c1159a273b 79 Gene3D G3DSA:3.30.70.330 1 79 2.4E-23 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AYJ52_07440 35f23612b2d2d1ee529622c1159a273b 79 SUPERFAMILY SSF54928 2 77 1.75E-24 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 ProSitePatterns PS00091 Thymidylate synthase active site. 142 170 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 PRINTS PR00108 Thymidylate synthase family signature 131 150 3.2E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 PRINTS PR00108 Thymidylate synthase family signature 157 172 3.2E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.2E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 PRINTS PR00108 Thymidylate synthase family signature 175 201 3.2E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 PRINTS PR00108 Thymidylate synthase family signature 213 230 3.2E-47 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 280 1.8E-138 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 SUPERFAMILY SSF55831 1 280 3.14E-128 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 Hamap MF_00008 Thymidylate synthase [thyA]. 1 280 39.461 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 Pfam PF00303 Thymidylate synthase 3 280 3.0E-117 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_07520 b4c50a7251c040d22888548a2b45819f 280 Gene3D G3DSA:3.30.572.10 1 280 1.1E-130 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AYJ52_16585 641e4e51e27cfd91851789d499a15806 432 Pfam PF03109 ABC1 family 99 217 1.1E-31 T 11-10-2018 IPR004147 UbiB domain AYJ52_16585 641e4e51e27cfd91851789d499a15806 432 SUPERFAMILY SSF56112 79 338 3.52E-23 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_02960 fe9932bd52b29423b0fb3165f4fa7f59 343 Gene3D G3DSA:2.40.40.20 273 338 1.5E-12 T 11-10-2018 AYJ52_02960 fe9932bd52b29423b0fb3165f4fa7f59 343 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 5.7E-155 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AYJ52_02960 fe9932bd52b29423b0fb3165f4fa7f59 343 Gene3D G3DSA:3.40.630.30 1 272 4.3E-114 T 11-10-2018 AYJ52_02960 fe9932bd52b29423b0fb3165f4fa7f59 343 SUPERFAMILY SSF55729 1 337 9.89E-128 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_02960 fe9932bd52b29423b0fb3165f4fa7f59 343 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 1.3E-137 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AYJ52_02960 fe9932bd52b29423b0fb3165f4fa7f59 343 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 8.4E-147 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AYJ52_13575 7a78e1d706ce943675f4d98b225ad015 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 135 9.3E-23 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AYJ52_13575 7a78e1d706ce943675f4d98b225ad015 137 Gene3D G3DSA:3.30.420.270 64 133 1.4E-7 T 11-10-2018 AYJ52_13685 976f2de36700261617701a8ae436d97f 144 Gene3D G3DSA:3.30.428.10 1 136 2.7E-37 T 11-10-2018 IPR036265 HIT-like superfamily AYJ52_13685 976f2de36700261617701a8ae436d97f 144 SUPERFAMILY SSF54197 1 131 8.29E-30 T 11-10-2018 IPR036265 HIT-like superfamily AYJ52_13685 976f2de36700261617701a8ae436d97f 144 Pfam PF01230 HIT domain 10 98 6.1E-12 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AYJ52_13685 976f2de36700261617701a8ae436d97f 144 PIRSF PIRSF000714 1 138 3.7E-47 T 11-10-2018 IPR026026 Histidine triad hydrolase, Hint-type AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 Pfam PF01751 Toprim domain 413 507 1.7E-12 T 11-10-2018 IPR006171 TOPRIM domain AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 625 46.411 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 Gene3D G3DSA:3.30.230.10 216 388 2.6E-52 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 555 617 1.9E-22 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 SUPERFAMILY SSF54211 217 382 1.27E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 170 4.1E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 621 2.2E-288 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 SMART SM00433 33 621 5.5E-205 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 Gene3D G3DSA:3.40.50.670 389 620 1.2E-91 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 SMART SM00387 26 173 8.9E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 SUPERFAMILY SSF55874 3 214 7.2E-63 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 Pfam PF00204 DNA gyrase B 218 385 1.5E-39 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 134 148 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 581 595 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR01098 Topoisomerase IV subunit B signature 25 38 5.3E-94 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 Gene3D G3DSA:3.30.565.10 1 215 7.5E-74 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 SUPERFAMILY SSF56719 388 618 2.56E-77 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR00418 DNA topoisomerase II family signature 479 495 4.1E-59 T 11-10-2018 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR00418 DNA topoisomerase II family signature 559 575 4.1E-59 T 11-10-2018 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR00418 DNA topoisomerase II family signature 497 514 4.1E-59 T 11-10-2018 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR00418 DNA topoisomerase II family signature 517 529 4.1E-59 T 11-10-2018 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR00418 DNA topoisomerase II family signature 30 45 4.1E-59 T 11-10-2018 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR00418 DNA topoisomerase II family signature 108 122 4.1E-59 T 11-10-2018 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR00418 DNA topoisomerase II family signature 266 279 4.1E-59 T 11-10-2018 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR00418 DNA topoisomerase II family signature 414 428 4.1E-59 T 11-10-2018 AYJ52_04260 6576a03ab2c5cbc7fe8a96fc804fde77 627 PRINTS PR00418 DNA topoisomerase II family signature 65 78 4.1E-59 T 11-10-2018 AYJ52_15815 661dc2264838aadd042d35f160c7119f 103 Gene3D G3DSA:1.10.10.370 33 103 5.2E-19 T 11-10-2018 AYJ52_15815 661dc2264838aadd042d35f160c7119f 103 Gene3D G3DSA:3.30.1420.10 1 29 2.0E-7 T 11-10-2018 AYJ52_15815 661dc2264838aadd042d35f160c7119f 103 SUPERFAMILY SSF69721 2 103 6.93E-29 T 11-10-2018 IPR025526 DsrC-like domain superfamily AYJ52_15815 661dc2264838aadd042d35f160c7119f 103 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 103 2.7E-26 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AYJ52_15815 661dc2264838aadd042d35f160c7119f 103 PIRSF PIRSF006223 1 103 2.6E-21 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AYJ52_15815 661dc2264838aadd042d35f160c7119f 103 Pfam PF04358 DsrC like protein 2 103 1.2E-27 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AYJ52_08850 655c9a8e4a83565f5ebc56143d3e0294 354 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 354 67.828 T 11-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AYJ52_08850 655c9a8e4a83565f5ebc56143d3e0294 354 Gene3D G3DSA:3.40.50.10800 209 304 1.3E-97 T 11-10-2018 AYJ52_08850 655c9a8e4a83565f5ebc56143d3e0294 354 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 40 349 1.5E-114 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AYJ52_08850 655c9a8e4a83565f5ebc56143d3e0294 354 Gene3D G3DSA:3.40.50.10800 41 329 1.3E-97 T 11-10-2018 AYJ52_08850 655c9a8e4a83565f5ebc56143d3e0294 354 Gene3D G3DSA:3.40.50.10800 124 346 1.3E-97 T 11-10-2018 AYJ52_08850 655c9a8e4a83565f5ebc56143d3e0294 354 SUPERFAMILY SSF142754 39 348 2.09E-109 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AYJ52_08850 655c9a8e4a83565f5ebc56143d3e0294 354 Pfam PF02445 Quinolinate synthetase A protein 41 347 7.3E-105 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AYJ52_09890 130305307584bbcfbf9351e5b2fcf9ef 301 SUPERFAMILY SSF51735 3 257 5.16E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_09890 130305307584bbcfbf9351e5b2fcf9ef 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 220 1.9E-23 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AYJ52_09890 130305307584bbcfbf9351e5b2fcf9ef 301 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 5 294 7.6E-87 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 AYJ52_09890 130305307584bbcfbf9351e5b2fcf9ef 301 Pfam PF08338 Domain of unknown function (DUF1731) 252 297 1.2E-13 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 AYJ52_09890 130305307584bbcfbf9351e5b2fcf9ef 301 Gene3D G3DSA:3.40.50.720 4 300 3.4E-71 T 11-10-2018 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 Gene3D G3DSA:2.40.30.10 2 103 1.0E-21 T 11-10-2018 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 SUPERFAMILY SSF52343 100 227 6.29E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_09660 38182c7d99ff22431beede99fa650365 318 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 267 275 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 Gene3D G3DSA:3.40.50.80 104 222 4.8E-26 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_09660 38182c7d99ff22431beede99fa650365 318 SUPERFAMILY SSF54292 214 316 4.98E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 Gene3D G3DSA:3.10.20.30 223 318 4.1E-24 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_09660 38182c7d99ff22431beede99fa650365 318 Hamap MF_02098 Carnitine monooxygenase reductase subunit. 8 318 82.288 T 11-10-2018 IPR039003 Carnitine monooxygenase reductase subunit GO:0009437 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 Pfam PF00970 Oxidoreductase FAD-binding domain 10 101 1.5E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 240 309 3.8E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 Pfam PF00175 Oxidoreductase NAD-binding domain 115 203 5.5E-8 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 139 148 2.9E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 54 68 2.9E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 190 198 2.9E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 92 106 2.9E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 78 92 2.9E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 114 133 2.9E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 32 42 2.9E-30 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_09660 38182c7d99ff22431beede99fa650365 318 SUPERFAMILY SSF63380 4 102 3.86E-22 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 SUPERFAMILY SSF49503 19 174 8.52E-35 T 11-10-2018 IPR008972 Cupredoxin AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 ProSitePatterns PS00079 Multicopper oxidases signature 1. 573 593 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 Pfam PF07731 Multicopper oxidase 485 597 2.3E-27 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 24 595 2.7E-195 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 SUPERFAMILY SSF49503 446 595 1.58E-36 T 11-10-2018 IPR008972 Cupredoxin AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 Pfam PF00394 Multicopper oxidase 159 326 4.5E-27 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 Gene3D G3DSA:2.60.40.420 461 609 2.0E-33 T 11-10-2018 IPR008972 Cupredoxin AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 Gene3D G3DSA:2.60.40.420 15 144 3.2E-38 T 11-10-2018 IPR008972 Cupredoxin AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 Gene3D G3DSA:2.60.40.420 157 368 8.8E-40 T 11-10-2018 IPR008972 Cupredoxin AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 Pfam PF07732 Multicopper oxidase 32 146 3.6E-35 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 ProSitePatterns PS00080 Multicopper oxidases signature 2. 578 589 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AYJ52_08295 1d3e77512135393989de31efb56a6b14 625 SUPERFAMILY SSF49503 156 360 3.7E-44 T 11-10-2018 IPR008972 Cupredoxin AYJ52_01280 d8732148e01ab334be7a98d97bc5d825 492 Gene3D G3DSA:3.90.1300.10 3 487 1.2E-199 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_01280 d8732148e01ab334be7a98d97bc5d825 492 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 479 90.911 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_01280 d8732148e01ab334be7a98d97bc5d825 492 ProSitePatterns PS00571 Amidases signature. 152 183 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AYJ52_01280 d8732148e01ab334be7a98d97bc5d825 492 SUPERFAMILY SSF75304 1 477 1.22E-164 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_01280 d8732148e01ab334be7a98d97bc5d825 492 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 479 8.7E-184 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_01280 d8732148e01ab334be7a98d97bc5d825 492 Pfam PF01425 Amidase 25 468 5.6E-163 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 416 1.4E-22 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 Gene3D G3DSA:3.40.1190.10 111 323 7.4E-83 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 SUPERFAMILY SSF51984 22 109 3.4E-28 T 11-10-2018 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 Gene3D G3DSA:3.90.190.20 324 480 1.4E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 SUPERFAMILY SSF53244 326 475 1.3E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 24 473 1.7E-170 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 SUPERFAMILY SSF53623 108 325 1.05E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 Gene3D G3DSA:3.40.50.720 23 110 2.6E-32 T 11-10-2018 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 480 43.041 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 Pfam PF08245 Mur ligase middle domain 127 307 1.8E-30 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AYJ52_04140 a3ad511ac01dc1a8449d2a4aa76ae46b 482 Pfam PF01225 Mur ligase family, catalytic domain 24 122 1.5E-28 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 80 714 5.7E-189 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 Pfam PF08206 Ribonuclease B OB domain 90 142 1.2E-6 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 Hamap MF_01895 Ribonuclease R [rnr]. 41 714 50.395 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 Pfam PF00575 S1 RNA binding domain 632 712 4.2E-11 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 SUPERFAMILY SSF50249 230 631 5.03E-139 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 SMART SM00316 631 714 4.6E-12 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 TIGRFAM TIGR02063 RNase_R: ribonuclease R 22 715 1.9E-229 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 Gene3D G3DSA:2.40.50.140 72 148 2.4E-7 T 11-10-2018 AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 SUPERFAMILY SSF50249 139 240 6.0E-9 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 SUPERFAMILY SSF50249 72 148 2.39E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 Pfam PF00773 RNB domain 262 587 1.4E-105 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 SMART SM00955 262 588 4.8E-170 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 SUPERFAMILY SSF50249 632 713 2.68E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_02505 d6e9ac169bb211721f0e1f57fe92cab5 805 Gene3D G3DSA:2.40.50.140 634 745 2.2E-21 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00943 Copper-transporting ATPase signature 296 314 8.7E-12 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00943 Copper-transporting ATPase signature 121 141 8.7E-12 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00943 Copper-transporting ATPase signature 429 443 8.7E-12 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00943 Copper-transporting ATPase signature 276 295 8.7E-12 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00943 Copper-transporting ATPase signature 781 795 8.7E-12 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00943 Copper-transporting ATPase signature 685 702 8.7E-12 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 239 817 3.1E-187 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 SUPERFAMILY SSF81653 310 406 5.89E-29 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 Gene3D G3DSA:3.40.50.1000 489 760 4.1E-91 T 11-10-2018 IPR023214 HAD superfamily AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 ProSitePatterns PS01047 Heavy-metal-associated domain. 85 114 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 278 787 2.4E-91 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 ProSitePatterns PS01047 Heavy-metal-associated domain. 18 47 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 727 1.7E-29 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 665 1.7E-29 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 731 743 1.7E-29 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 356 370 1.7E-29 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 522 1.7E-29 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 644 1.7E-29 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 SUPERFAMILY SSF55008 80 145 6.28E-21 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 Gene3D G3DSA:3.30.70.100 12 77 9.6E-22 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 SUPERFAMILY SSF81665 255 775 4.58E-13 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 722 3.5E-44 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 Pfam PF00403 Heavy-metal-associated domain 83 140 4.0E-17 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 Pfam PF00403 Heavy-metal-associated domain 15 75 4.1E-15 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 221 818 7.8E-177 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 510 516 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 SUPERFAMILY SSF56784 506 815 1.56E-61 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 Pfam PF00122 E1-E2 ATPase 307 486 4.4E-56 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 SUPERFAMILY SSF55008 9 76 6.54E-21 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 Gene3D G3DSA:2.70.150.20 299 411 4.3E-41 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 Gene3D G3DSA:3.30.70.100 81 144 4.4E-23 T 11-10-2018 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 81 141 1.1E-11 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 13 76 2.5E-13 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AYJ52_06210 d44b020430561d6c6d96b308f82454cf 828 Gene3D G3DSA:3.40.1110.10 519 640 4.1E-91 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 Gene3D G3DSA:3.50.50.60 3 320 9.3E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 SUPERFAMILY SSF51905 2 217 3.89E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 Gene3D G3DSA:1.10.287.990 33 101 9.3E-73 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PIRSF PIRSF000350 1 457 1.7E-55 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 SUPERFAMILY SSF55424 342 454 1.63E-24 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 318 1.7E-36 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 2.3E-33 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.3E-33 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 2.3E-33 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 131 140 2.3E-33 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 2.3E-33 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 2.3E-33 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 2.3E-33 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.3E-33 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 SUPERFAMILY SSF51905 165 330 5.41E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 343 448 3.8E-18 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 Gene3D G3DSA:3.50.50.60 140 261 9.3E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 Gene3D G3DSA:3.30.390.30 339 457 1.5E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.6E-11 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 146 1.6E-11 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.6E-11 T 11-10-2018 AYJ52_02130 ae20a61a00db31a58bf869ba76b6ed91 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.6E-11 T 11-10-2018 AYJ52_18535 839d036db93cc4a27c337a743ea4b20b 195 SUPERFAMILY SSF50814 37 193 9.35E-42 T 11-10-2018 IPR012674 Calycin AYJ52_18535 839d036db93cc4a27c337a743ea4b20b 195 Gene3D G3DSA:2.40.128.20 29 194 6.8E-48 T 11-10-2018 IPR012674 Calycin AYJ52_18535 839d036db93cc4a27c337a743ea4b20b 195 PIRSF PIRSF036893 7 195 1.0E-56 T 11-10-2018 IPR022271 Lipocalin, ApoD type AYJ52_18535 839d036db93cc4a27c337a743ea4b20b 195 ProSitePatterns PS00213 Lipocalin signature. 47 58 - T 11-10-2018 IPR022272 Lipocalin family conserved site AYJ52_18535 839d036db93cc4a27c337a743ea4b20b 195 PRINTS PR01171 Bacterial lipocalin signature 182 192 3.6E-8 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AYJ52_18535 839d036db93cc4a27c337a743ea4b20b 195 PRINTS PR01171 Bacterial lipocalin signature 46 60 3.6E-8 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AYJ52_18535 839d036db93cc4a27c337a743ea4b20b 195 PRINTS PR01171 Bacterial lipocalin signature 155 166 3.6E-8 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AYJ52_18535 839d036db93cc4a27c337a743ea4b20b 195 PRINTS PR01171 Bacterial lipocalin signature 83 92 3.6E-8 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AYJ52_18535 839d036db93cc4a27c337a743ea4b20b 195 Pfam PF08212 Lipocalin-like domain 46 192 1.0E-45 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AYJ52_01485 77b15212889ef260b48786cb6882cb8d 120 Gene3D G3DSA:3.40.50.12740 1 120 5.1E-42 T 11-10-2018 AYJ52_01485 77b15212889ef260b48786cb6882cb8d 120 SMART SM00448 2 115 1.7E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_01485 77b15212889ef260b48786cb6882cb8d 120 Pfam PF00072 Response regulator receiver domain 4 115 7.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_01485 77b15212889ef260b48786cb6882cb8d 120 SUPERFAMILY SSF52172 1 120 8.97E-38 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_05210 8a693f43ba6730af90d5cf3f18469d67 248 Gene3D G3DSA:3.40.50.720 3 248 7.6E-66 T 11-10-2018 AYJ52_05210 8a693f43ba6730af90d5cf3f18469d67 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 1.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_05210 8a693f43ba6730af90d5cf3f18469d67 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 1.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_05210 8a693f43ba6730af90d5cf3f18469d67 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 1.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_05210 8a693f43ba6730af90d5cf3f18469d67 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_05210 8a693f43ba6730af90d5cf3f18469d67 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_05210 8a693f43ba6730af90d5cf3f18469d67 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 1.0E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_05210 8a693f43ba6730af90d5cf3f18469d67 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_05210 8a693f43ba6730af90d5cf3f18469d67 248 SUPERFAMILY SSF51735 12 244 1.96E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_05210 8a693f43ba6730af90d5cf3f18469d67 248 Pfam PF00106 short chain dehydrogenase 17 213 2.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_01285 56fc69d0c8de9c0ecfd878b1f888947f 489 SMART SM00845 337 488 9.9E-80 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AYJ52_01285 56fc69d0c8de9c0ecfd878b1f888947f 489 Gene3D G3DSA:1.10.10.410 429 489 1.4E-25 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AYJ52_01285 56fc69d0c8de9c0ecfd878b1f888947f 489 SUPERFAMILY SSF89095 306 413 7.85E-33 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AYJ52_01285 56fc69d0c8de9c0ecfd878b1f888947f 489 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 13 488 2.2E-164 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AYJ52_01285 56fc69d0c8de9c0ecfd878b1f888947f 489 Gene3D G3DSA:1.10.150.380 306 427 3.5E-33 T 11-10-2018 AYJ52_01285 56fc69d0c8de9c0ecfd878b1f888947f 489 Pfam PF02934 GatB/GatE catalytic domain 15 298 4.5E-108 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 AYJ52_01285 56fc69d0c8de9c0ecfd878b1f888947f 489 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 12 489 37.49 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AYJ52_01285 56fc69d0c8de9c0ecfd878b1f888947f 489 SUPERFAMILY SSF55931 14 305 3.34E-114 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AYJ52_01285 56fc69d0c8de9c0ecfd878b1f888947f 489 Pfam PF02637 GatB domain 337 488 9.5E-52 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AYJ52_01285 56fc69d0c8de9c0ecfd878b1f888947f 489 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 154 168 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 AYJ52_10305 2636741731f99bbc7981c0771a43e29d 444 Gene3D G3DSA:3.40.50.1100 116 238 5.3E-197 T 11-10-2018 AYJ52_10305 2636741731f99bbc7981c0771a43e29d 444 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 438 1.4E-219 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AYJ52_10305 2636741731f99bbc7981c0771a43e29d 444 Gene3D G3DSA:3.40.50.1100 24 438 5.3E-197 T 11-10-2018 AYJ52_10305 2636741731f99bbc7981c0771a43e29d 444 SUPERFAMILY SSF53686 56 439 6.17E-57 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_10305 2636741731f99bbc7981c0771a43e29d 444 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 394 5.7E-62 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_10305 2636741731f99bbc7981c0771a43e29d 444 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AYJ52_10305 2636741731f99bbc7981c0771a43e29d 444 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 444 259.359 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AYJ52_10190 82a8ca4c10d61636ae4717e5d5d8ebe0 407 SUPERFAMILY SSF103473 5 406 6.93E-69 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_10190 82a8ca4c10d61636ae4717e5d5d8ebe0 407 Pfam PF07690 Major Facilitator Superfamily 18 369 9.6E-48 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_10190 82a8ca4c10d61636ae4717e5d5d8ebe0 407 Gene3D G3DSA:1.20.1250.20 8 200 2.5E-33 T 11-10-2018 AYJ52_10190 82a8ca4c10d61636ae4717e5d5d8ebe0 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 282 299 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_10190 82a8ca4c10d61636ae4717e5d5d8ebe0 407 Gene3D G3DSA:1.20.1250.20 217 406 1.8E-32 T 11-10-2018 AYJ52_08315 6708274df72709631dd9c68e8ea8aee2 499 SUPERFAMILY SSF111369 131 326 1.12E-14 T 11-10-2018 AYJ52_08315 6708274df72709631dd9c68e8ea8aee2 499 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 117 322 9.8E-65 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_08315 6708274df72709631dd9c68e8ea8aee2 499 Gene3D G3DSA:2.40.30.170 251 324 4.4E-28 T 11-10-2018 AYJ52_08315 6708274df72709631dd9c68e8ea8aee2 499 Gene3D G3DSA:2.40.50.320 422 498 3.4E-20 T 11-10-2018 AYJ52_08315 6708274df72709631dd9c68e8ea8aee2 499 Gene3D G3DSA:1.10.287.470 189 200 4.4E-28 T 11-10-2018 AYJ52_08315 6708274df72709631dd9c68e8ea8aee2 499 Pfam PF11604 Copper binding periplasmic protein CusF 428 490 9.9E-18 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF AYJ52_08315 6708274df72709631dd9c68e8ea8aee2 499 Gene3D G3DSA:2.40.50.100 201 250 4.4E-28 T 11-10-2018 AYJ52_08315 6708274df72709631dd9c68e8ea8aee2 499 Gene3D G3DSA:2.40.420.20 325 420 4.3E-24 T 11-10-2018 AYJ52_08315 6708274df72709631dd9c68e8ea8aee2 499 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 208 395 4.4E-38 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_13055 cf2b899cff724f1c8aca5ae70e79fa1e 297 SUPERFAMILY SSF53850 1 270 1.4E-59 T 11-10-2018 AYJ52_13055 cf2b899cff724f1c8aca5ae70e79fa1e 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 267 2.8E-49 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_13055 cf2b899cff724f1c8aca5ae70e79fa1e 297 SMART SM00062 38 269 1.5E-53 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_13055 cf2b899cff724f1c8aca5ae70e79fa1e 297 SMART SM00079 32 268 0.0097 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AYJ52_13055 cf2b899cff724f1c8aca5ae70e79fa1e 297 Gene3D G3DSA:3.40.190.10 27 272 5.2E-92 T 11-10-2018 AYJ52_13055 cf2b899cff724f1c8aca5ae70e79fa1e 297 Gene3D G3DSA:3.40.190.10 131 226 5.2E-92 T 11-10-2018 AYJ52_17025 7d7de8a92e5fa327ee06ac9a1bcbefa2 532 Gene3D G3DSA:3.90.1150.10 31 523 1.9E-214 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_17025 7d7de8a92e5fa327ee06ac9a1bcbefa2 532 Pfam PF00155 Aminotransferase class I and II 187 506 8.1E-22 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_17025 7d7de8a92e5fa327ee06ac9a1bcbefa2 532 SUPERFAMILY SSF53383 133 520 4.87E-45 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_17025 7d7de8a92e5fa327ee06ac9a1bcbefa2 532 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 311 324 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AYJ52_17025 7d7de8a92e5fa327ee06ac9a1bcbefa2 532 Gene3D G3DSA:1.10.20.110 38 403 1.9E-214 T 11-10-2018 AYJ52_17025 7d7de8a92e5fa327ee06ac9a1bcbefa2 532 Gene3D G3DSA:3.40.640.10 162 381 1.9E-214 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_17025 7d7de8a92e5fa327ee06ac9a1bcbefa2 532 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 12 525 5.8E-236 T 11-10-2018 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 Gene3D G3DSA:3.30.2130.30 12 269 6.3E-114 T 11-10-2018 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 Pfam PF02926 THUMP domain 32 154 3.4E-10 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 SUPERFAMILY SSF53335 422 730 2.35E-61 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 Gene3D G3DSA:3.30.750.80 419 510 9.1E-34 T 11-10-2018 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 210 221 - T 11-10-2018 IPR000241 Putative RNA methylase domain AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 SUPERFAMILY SSF53335 162 386 1.29E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 222 3.0E-5 T 11-10-2018 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 320 332 3.0E-5 T 11-10-2018 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 SMART SM00981 69 167 6.4E-7 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 Gene3D G3DSA:3.40.50.150 511 730 4.0E-68 T 11-10-2018 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 PIRSF PIRSF037618 6 732 2.9E-286 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 506 688 9.3E-19 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 Gene3D G3DSA:3.40.50.150 182 387 6.3E-114 T 11-10-2018 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 323 329 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 Pfam PF01170 Putative RNA methylase family UPF0020 175 387 4.5E-36 T 11-10-2018 IPR000241 Putative RNA methylase domain AYJ52_11230 7a414c2c76fb26a09294a6d8bb101fe7 736 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 10 731 29.611 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AYJ52_13630 de132051d8fc98081058438b6caf1914 219 SUPERFAMILY SSF143081 21 202 1.14E-42 T 11-10-2018 IPR036590 SOS response associated peptidase-like AYJ52_13630 de132051d8fc98081058438b6caf1914 219 Gene3D G3DSA:3.90.1680.10 2 210 5.7E-44 T 11-10-2018 IPR036590 SOS response associated peptidase-like AYJ52_13630 de132051d8fc98081058438b6caf1914 219 Pfam PF02586 SOS response associated peptidase (SRAP) 45 206 5.2E-24 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) AYJ52_05770 bfeb439112b8c780082fa1d43588aa11 222 Gene3D G3DSA:3.40.30.10 1 83 4.0E-30 T 11-10-2018 AYJ52_05770 bfeb439112b8c780082fa1d43588aa11 222 Gene3D G3DSA:1.20.1050.10 84 208 3.5E-25 T 11-10-2018 AYJ52_05770 bfeb439112b8c780082fa1d43588aa11 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 73 6.3E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_05770 bfeb439112b8c780082fa1d43588aa11 222 Pfam PF14497 Glutathione S-transferase, C-terminal domain 135 201 3.3E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AYJ52_05770 bfeb439112b8c780082fa1d43588aa11 222 SUPERFAMILY SSF47616 83 207 1.53E-18 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_05770 bfeb439112b8c780082fa1d43588aa11 222 SUPERFAMILY SSF52833 5 80 3.41E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_05890 eb3a1bf414db3d17c84378e0276ae7a9 214 Gene3D G3DSA:1.10.10.60 17 85 8.9E-26 T 11-10-2018 AYJ52_05890 eb3a1bf414db3d17c84378e0276ae7a9 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 74 2.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05890 eb3a1bf414db3d17c84378e0276ae7a9 214 ProSitePatterns PS01081 TetR-type HTH domain signature. 43 73 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AYJ52_05890 eb3a1bf414db3d17c84378e0276ae7a9 214 Gene3D G3DSA:1.10.357.10 91 212 2.4E-28 T 11-10-2018 AYJ52_05890 eb3a1bf414db3d17c84378e0276ae7a9 214 SUPERFAMILY SSF46689 18 84 4.72E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_05890 eb3a1bf414db3d17c84378e0276ae7a9 214 SUPERFAMILY SSF48498 98 211 4.08E-23 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_01255 d9222eb344b67c69ce26a0678524c1ae 186 Pfam PF02545 Maf-like protein 3 183 1.3E-56 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AYJ52_01255 d9222eb344b67c69ce26a0678524c1ae 186 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 180 1.0E-50 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AYJ52_01255 d9222eb344b67c69ce26a0678524c1ae 186 Hamap MF_00528 Septum formation protein Maf [maf]. 3 186 29.244 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AYJ52_01255 d9222eb344b67c69ce26a0678524c1ae 186 PIRSF PIRSF006305 1 186 1.6E-53 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AYJ52_01255 d9222eb344b67c69ce26a0678524c1ae 186 SUPERFAMILY SSF52972 2 182 7.19E-60 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AYJ52_01255 d9222eb344b67c69ce26a0678524c1ae 186 Gene3D G3DSA:3.90.950.10 1 186 1.4E-67 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AYJ52_13870 d0882415011276ba9c3370898f54bdb8 197 Gene3D G3DSA:1.10.10.690 2 197 1.1E-25 T 11-10-2018 IPR027405 YidB-like AYJ52_13870 d0882415011276ba9c3370898f54bdb8 197 Pfam PF06078 Bacterial protein of unknown function (DUF937) 17 172 1.9E-17 T 11-10-2018 IPR009282 Protein of unknown function DUF937 AYJ52_13870 d0882415011276ba9c3370898f54bdb8 197 SUPERFAMILY SSF140804 55 196 9.29E-29 T 11-10-2018 IPR027405 YidB-like AYJ52_03345 306c30822f9e8619a28ac79c65e30428 291 SUPERFAMILY SSF53474 152 245 1.86E-9 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_03345 306c30822f9e8619a28ac79c65e30428 291 Pfam PF07819 PGAP1-like protein 150 210 4.9E-6 T 11-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 AYJ52_03345 306c30822f9e8619a28ac79c65e30428 291 Gene3D G3DSA:3.40.50.1820 114 290 3.0E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_05825 03c9bb1d0585e74468e1411d92d60284 291 Pfam PF00119 ATP synthase A chain 55 285 3.2E-56 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05825 03c9bb1d0585e74468e1411d92d60284 291 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 291 15.98 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05825 03c9bb1d0585e74468e1411d92d60284 291 ProSitePatterns PS00449 ATP synthase a subunit signature. 227 236 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05825 03c9bb1d0585e74468e1411d92d60284 291 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 45 286 8.3E-42 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05825 03c9bb1d0585e74468e1411d92d60284 291 Gene3D G3DSA:1.20.120.220 102 291 1.2E-59 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05825 03c9bb1d0585e74468e1411d92d60284 291 SUPERFAMILY SSF81336 103 285 6.15E-42 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_19555 77bbcca8917aab617e5ad436d4d2b950 203 SUPERFAMILY SSF53041 4 153 2.49E-28 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AYJ52_19555 77bbcca8917aab617e5ad436d4d2b950 203 Pfam PF00239 Resolvase, N terminal domain 8 153 2.3E-25 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AYJ52_19555 77bbcca8917aab617e5ad436d4d2b950 203 ProSitePatterns PS00397 Site-specific recombinases active site. 9 17 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AYJ52_19555 77bbcca8917aab617e5ad436d4d2b950 203 Pfam PF02796 Helix-turn-helix domain of resolvase 161 199 3.5E-7 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AYJ52_19555 77bbcca8917aab617e5ad436d4d2b950 203 ProSitePatterns PS00398 Site-specific recombinases signature 2. 65 77 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AYJ52_19555 77bbcca8917aab617e5ad436d4d2b950 203 SMART SM00857 6 157 7.8E-35 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AYJ52_19555 77bbcca8917aab617e5ad436d4d2b950 203 Gene3D G3DSA:3.40.50.1390 7 157 5.8E-29 T 11-10-2018 AYJ52_04440 b8ec0ae30ecfd9dab5a0c7f667b5d857 373 PIRSF PIRSF001259 2 373 4.8E-116 T 11-10-2018 AYJ52_04440 b8ec0ae30ecfd9dab5a0c7f667b5d857 373 SUPERFAMILY SSF55821 2 202 1.21E-85 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AYJ52_04440 b8ec0ae30ecfd9dab5a0c7f667b5d857 373 SUPERFAMILY SSF142695 205 365 5.89E-35 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AYJ52_04440 b8ec0ae30ecfd9dab5a0c7f667b5d857 373 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 2.5E-83 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_04440 b8ec0ae30ecfd9dab5a0c7f667b5d857 373 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 1.1E-74 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_04440 b8ec0ae30ecfd9dab5a0c7f667b5d857 373 Pfam PF00925 GTP cyclohydrolase II 210 365 1.8E-29 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AYJ52_04440 b8ec0ae30ecfd9dab5a0c7f667b5d857 373 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.913 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_04440 b8ec0ae30ecfd9dab5a0c7f667b5d857 373 Gene3D G3DSA:3.90.870.10 1 206 6.3E-87 T 11-10-2018 AYJ52_00925 e2f03a2b408b7367084dbc9c677c4885 483 SUPERFAMILY SSF56954 10 463 2.22E-108 T 11-10-2018 AYJ52_00925 e2f03a2b408b7367084dbc9c677c4885 483 Gene3D G3DSA:2.20.200.10 102 351 3.4E-133 T 11-10-2018 AYJ52_00925 e2f03a2b408b7367084dbc9c677c4885 483 Gene3D G3DSA:1.20.1600.10 55 462 3.4E-133 T 11-10-2018 AYJ52_00925 e2f03a2b408b7367084dbc9c677c4885 483 Pfam PF02321 Outer membrane efflux protein 68 251 2.5E-30 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_00925 e2f03a2b408b7367084dbc9c677c4885 483 Pfam PF02321 Outer membrane efflux protein 280 460 1.7E-32 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_00925 e2f03a2b408b7367084dbc9c677c4885 483 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 462 2.4E-109 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AYJ52_04405 18ce1b1dd5c710cee0aa24f7fcf23a31 404 SUPERFAMILY SSF51690 121 396 2.75E-91 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AYJ52_04405 18ce1b1dd5c710cee0aa24f7fcf23a31 404 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 4 398 4.4E-170 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AYJ52_04405 18ce1b1dd5c710cee0aa24f7fcf23a31 404 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 398 3.6E-82 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AYJ52_04405 18ce1b1dd5c710cee0aa24f7fcf23a31 404 Gene3D G3DSA:3.20.140.10 1 403 2.6E-150 T 11-10-2018 AYJ52_04405 18ce1b1dd5c710cee0aa24f7fcf23a31 404 SUPERFAMILY SSF54675 1 141 1.24E-41 T 11-10-2018 AYJ52_04405 18ce1b1dd5c710cee0aa24f7fcf23a31 404 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 399 47.389 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AYJ52_04405 18ce1b1dd5c710cee0aa24f7fcf23a31 404 PIRSF PIRSF000484 1 385 2.4E-77 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AYJ52_07070 b4eabbe094d5274193801246c7ad59a3 179 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 45 176 2.9E-45 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AYJ52_07070 b4eabbe094d5274193801246c7ad59a3 179 Gene3D G3DSA:3.30.700.10 69 177 1.5E-30 T 11-10-2018 AYJ52_07070 b4eabbe094d5274193801246c7ad59a3 179 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 45 65 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_07070 b4eabbe094d5274193801246c7ad59a3 179 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 45 66 8.8E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_07070 b4eabbe094d5274193801246c7ad59a3 179 SUPERFAMILY SSF54523 73 177 7.85E-26 T 11-10-2018 AYJ52_07070 b4eabbe094d5274193801246c7ad59a3 179 Pfam PF07963 Prokaryotic N-terminal methylation motif 41 66 4.4E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_07070 b4eabbe094d5274193801246c7ad59a3 179 Pfam PF08334 Type II secretion system (T2SS), protein G 69 176 8.9E-34 T 11-10-2018 IPR013545 Type II secretion system protein G AYJ52_07070 b4eabbe094d5274193801246c7ad59a3 179 PRINTS PR00813 Bacterial general secretion pathway protein G signature 82 100 1.5E-16 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AYJ52_07070 b4eabbe094d5274193801246c7ad59a3 179 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 71 1.5E-16 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AYJ52_12095 fb188c0257e0ae67d77b36d5b3e5240b 285 SUPERFAMILY SSF46785 3 86 4.66E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12095 fb188c0257e0ae67d77b36d5b3e5240b 285 Pfam PF03466 LysR substrate binding domain 92 234 1.3E-16 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12095 fb188c0257e0ae67d77b36d5b3e5240b 285 Gene3D G3DSA:1.10.10.10 1 83 6.0E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12095 fb188c0257e0ae67d77b36d5b3e5240b 285 Gene3D G3DSA:3.40.190.10 160 251 5.6E-32 T 11-10-2018 AYJ52_12095 fb188c0257e0ae67d77b36d5b3e5240b 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.8E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12095 fb188c0257e0ae67d77b36d5b3e5240b 285 SUPERFAMILY SSF53850 91 280 2.53E-19 T 11-10-2018 AYJ52_12095 fb188c0257e0ae67d77b36d5b3e5240b 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12095 fb188c0257e0ae67d77b36d5b3e5240b 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12095 fb188c0257e0ae67d77b36d5b3e5240b 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12095 fb188c0257e0ae67d77b36d5b3e5240b 285 Gene3D G3DSA:3.40.190.10 94 256 5.6E-32 T 11-10-2018 AYJ52_15825 a32fa2b0b3717d8ef401423797e69cba 462 Pfam PF00155 Aminotransferase class I and II 120 449 8.4E-40 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_15825 a32fa2b0b3717d8ef401423797e69cba 462 Gene3D G3DSA:1.10.10.10 6 103 2.0E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15825 a32fa2b0b3717d8ef401423797e69cba 462 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 70 8.5E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_15825 a32fa2b0b3717d8ef401423797e69cba 462 Gene3D G3DSA:3.90.1150.10 105 451 5.3E-80 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_15825 a32fa2b0b3717d8ef401423797e69cba 462 SMART SM00345 11 70 6.1E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_15825 a32fa2b0b3717d8ef401423797e69cba 462 Gene3D G3DSA:3.40.640.10 141 357 5.3E-80 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_15825 a32fa2b0b3717d8ef401423797e69cba 462 SUPERFAMILY SSF46785 4 73 2.03E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_15825 a32fa2b0b3717d8ef401423797e69cba 462 SUPERFAMILY SSF53383 83 452 7.76E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_07055 2b3889b0a12c25b93116b9daf89135da 614 SUPERFAMILY SSF51735 398 527 8.45E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_07055 2b3889b0a12c25b93116b9daf89135da 614 Gene3D G3DSA:1.20.1530.20 1 378 7.6E-84 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AYJ52_07055 2b3889b0a12c25b93116b9daf89135da 614 Pfam PF00999 Sodium/hydrogen exchanger family 9 369 6.2E-67 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AYJ52_07055 2b3889b0a12c25b93116b9daf89135da 614 Gene3D G3DSA:3.40.50.720 395 559 7.2E-35 T 11-10-2018 AYJ52_07055 2b3889b0a12c25b93116b9daf89135da 614 Pfam PF02254 TrkA-N domain 400 512 2.3E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AYJ52_07055 2b3889b0a12c25b93116b9daf89135da 614 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 279 6.1E-79 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 Gene3D G3DSA:3.10.20.30 2 96 1.3E-24 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 380 479 2.2E-28 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 SUPERFAMILY SSF55447 377 480 2.88E-30 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 Gene3D G3DSA:3.30.465.10 257 369 4.0E-29 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 PIRSF PIRSF036557 3 493 2.4E-193 T 11-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 SMART SM01092 379 481 9.7E-32 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 SUPERFAMILY SSF56176 191 369 9.27E-48 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 205 369 2.2E-45 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 Pfam PF01799 [2Fe-2S] binding domain 90 168 3.2E-30 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 SUPERFAMILY SSF47741 106 214 3.4E-33 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 Gene3D G3DSA:1.10.150.120 100 174 1.6E-32 T 11-10-2018 AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 Gene3D G3DSA:3.30.390.50 379 481 2.2E-26 T 11-10-2018 AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 48 56 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 SUPERFAMILY SSF54292 11 95 3.71E-15 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 Gene3D G3DSA:3.30.43.10 207 256 1.8E-18 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AYJ52_17775 a95ac3c7c104b1832d8edfa45a96b5dd 499 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 6 480 2.7E-199 T 11-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 AYJ52_01645 73ed89a771ddb3047388d8c8d489e4ae 337 Gene3D G3DSA:3.40.50.150 151 337 3.7E-40 T 11-10-2018 AYJ52_01645 73ed89a771ddb3047388d8c8d489e4ae 337 Gene3D G3DSA:3.40.50.150 1 149 4.2E-40 T 11-10-2018 AYJ52_01645 73ed89a771ddb3047388d8c8d489e4ae 337 Pfam PF05175 Methyltransferase small domain 164 333 7.0E-51 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AYJ52_01645 73ed89a771ddb3047388d8c8d489e4ae 337 SUPERFAMILY SSF53335 149 329 4.78E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_01645 73ed89a771ddb3047388d8c8d489e4ae 337 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 266 272 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AYJ52_01645 73ed89a771ddb3047388d8c8d489e4ae 337 Pfam PF08468 Methyltransferase small domain N-terminal 5 156 2.1E-43 T 11-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 AYJ52_01645 73ed89a771ddb3047388d8c8d489e4ae 337 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 337 39.02 T 11-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 Gene3D G3DSA:1.10.8.10 1 56 5.4E-25 T 11-10-2018 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 Gene3D G3DSA:3.30.479.20 57 148 1.0E-25 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 288 73.697 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 SUPERFAMILY SSF46934 4 54 5.1E-18 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 Pfam PF00889 Elongation factor TS 71 269 6.4E-62 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 Gene3D G3DSA:1.10.286.20 188 234 3.5E-37 T 11-10-2018 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 2.7E-95 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 SUPERFAMILY SSF54713 57 269 9.0E-44 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AYJ52_17580 bdb3d5988d21a4e32ab5fb4395f8f19d 291 Gene3D G3DSA:3.30.479.20 153 268 3.5E-37 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AYJ52_17215 652b22e275302fa65caba284a4f2745c 379 Gene3D G3DSA:3.30.420.380 6 163 5.0E-8 T 11-10-2018 AYJ52_17215 652b22e275302fa65caba284a4f2745c 379 PIRSF PIRSF015761 10 379 2.0E-18 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AYJ52_17215 652b22e275302fa65caba284a4f2745c 379 Pfam PF12693 GspL periplasmic domain 232 372 2.5E-12 T 11-10-2018 IPR025691 GspL periplasmic domain AYJ52_17215 652b22e275302fa65caba284a4f2745c 379 Gene3D G3DSA:3.30.1360.100 298 379 1.3E-8 T 11-10-2018 AYJ52_17215 652b22e275302fa65caba284a4f2745c 379 SUPERFAMILY SSF53067 2 133 2.2E-10 T 11-10-2018 AYJ52_17215 652b22e275302fa65caba284a4f2745c 379 Pfam PF05134 Type II secretion system (T2SS), protein L 40 180 3.4E-8 T 11-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 SUPERFAMILY SSF82693 152 329 1.69E-18 T 11-10-2018 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 Gene3D G3DSA:3.30.2090.10 185 276 8.1E-281 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.1E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 2.1E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 2.1E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 2.1E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 2.1E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.1E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 2.1E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 Gene3D G3DSA:1.20.1640.10 15 512 8.1E-281 T 11-10-2018 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 SUPERFAMILY SSF82714 188 271 1.26E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1036 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 SUPERFAMILY SSF82693 569 661 1.1E-5 T 11-10-2018 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 Gene3D G3DSA:3.30.2090.10 722 810 8.1E-281 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 Gene3D G3DSA:3.30.70.1430 566 670 8.1E-281 T 11-10-2018 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 Pfam PF00873 AcrB/AcrD/AcrF family 5 1026 1.7E-303 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 Gene3D G3DSA:3.30.70.1320 135 329 8.1E-281 T 11-10-2018 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 SUPERFAMILY SSF82714 721 804 6.67E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 SUPERFAMILY SSF82866 295 501 2.35E-33 T 11-10-2018 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 Gene3D G3DSA:3.30.70.1440 671 868 8.1E-281 T 11-10-2018 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 SUPERFAMILY SSF82693 42 126 6.28E-22 T 11-10-2018 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 SUPERFAMILY SSF82866 805 1028 5.1E-53 T 11-10-2018 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 Gene3D G3DSA:3.30.70.1430 42 818 8.1E-281 T 11-10-2018 AYJ52_00415 7bb4a347104340f4ca1d0353a98c6d53 1042 Gene3D G3DSA:1.20.1640.10 513 1023 8.1E-281 T 11-10-2018 AYJ52_18565 9dd4b706edc39d0050f3d8ebed659c9e 281 Pfam PF00892 EamA-like transporter family 142 270 1.1E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_18565 9dd4b706edc39d0050f3d8ebed659c9e 281 Pfam PF00892 EamA-like transporter family 5 130 2.3E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_18565 9dd4b706edc39d0050f3d8ebed659c9e 281 SUPERFAMILY SSF103481 183 273 9.68E-11 T 11-10-2018 AYJ52_18565 9dd4b706edc39d0050f3d8ebed659c9e 281 SUPERFAMILY SSF103481 38 136 6.28E-8 T 11-10-2018 AYJ52_13425 5e3ae8e88e31b0e9d01e8b0206a1f9ac 295 Pfam PF02195 ParB-like nuclease domain 40 131 2.5E-26 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AYJ52_13425 5e3ae8e88e31b0e9d01e8b0206a1f9ac 295 Gene3D G3DSA:1.10.10.2830 118 231 1.2E-36 T 11-10-2018 AYJ52_13425 5e3ae8e88e31b0e9d01e8b0206a1f9ac 295 SUPERFAMILY SSF110849 39 133 1.44E-28 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AYJ52_13425 5e3ae8e88e31b0e9d01e8b0206a1f9ac 295 SUPERFAMILY SSF109709 124 230 1.05E-34 T 11-10-2018 AYJ52_13425 5e3ae8e88e31b0e9d01e8b0206a1f9ac 295 SMART SM00470 39 131 2.2E-31 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AYJ52_13425 5e3ae8e88e31b0e9d01e8b0206a1f9ac 295 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 215 6.9E-58 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AYJ52_13425 5e3ae8e88e31b0e9d01e8b0206a1f9ac 295 Gene3D G3DSA:3.90.1530.30 52 117 9.3E-28 T 11-10-2018 AYJ52_09880 9c4de51b9c63254cfe21b388357a45a5 125 Gene3D G3DSA:3.10.180.10 3 121 1.3E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_09880 9c4de51b9c63254cfe21b388357a45a5 125 SUPERFAMILY SSF54593 3 121 1.79E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_18280 aac40518c15081f8444cd157370a841d 161 SUPERFAMILY SSF46785 1 60 1.88E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_18280 aac40518c15081f8444cd157370a841d 161 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.5E-16 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ52_18280 aac40518c15081f8444cd157370a841d 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 9.9E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_18280 aac40518c15081f8444cd157370a841d 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 9.9E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_18280 aac40518c15081f8444cd157370a841d 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 9.9E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_18280 aac40518c15081f8444cd157370a841d 161 SMART SM00344 1 110 1.8E-31 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_18280 aac40518c15081f8444cd157370a841d 161 SUPERFAMILY SSF54909 63 146 8.98E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_18280 aac40518c15081f8444cd157370a841d 161 Gene3D G3DSA:1.10.10.10 2 51 4.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_18280 aac40518c15081f8444cd157370a841d 161 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.2E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_18280 aac40518c15081f8444cd157370a841d 161 Gene3D G3DSA:3.30.70.920 52 148 2.3E-23 T 11-10-2018 AYJ52_09470 17e6f9faedf003b9466ee966e62152b0 328 SUPERFAMILY SSF55048 138 203 9.29E-15 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AYJ52_09470 17e6f9faedf003b9466ee966e62152b0 328 Gene3D G3DSA:3.30.70.250 134 207 1.1E-92 T 11-10-2018 AYJ52_09470 17e6f9faedf003b9466ee966e62152b0 328 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 14 298 4.3E-99 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AYJ52_09470 17e6f9faedf003b9466ee966e62152b0 328 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 18 325 6.9E-39 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AYJ52_09470 17e6f9faedf003b9466ee966e62152b0 328 PIRSF PIRSF000446 12 321 7.9E-105 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AYJ52_09470 17e6f9faedf003b9466ee966e62152b0 328 SUPERFAMILY SSF52151 15 318 3.66E-70 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AYJ52_09470 17e6f9faedf003b9466ee966e62152b0 328 Gene3D G3DSA:3.40.366.10 17 296 1.1E-92 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AYJ52_09470 17e6f9faedf003b9466ee966e62152b0 328 Pfam PF00698 Acyl transferase domain 17 291 8.8E-37 T 11-10-2018 IPR014043 Acyl transferase AYJ52_03120 8329ad9837472e1f894ccf207714cdc7 160 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 34 115 1.9E-8 T 11-10-2018 IPR031982 Type IV minor pilin ComP AYJ52_03120 8329ad9837472e1f894ccf207714cdc7 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 4.9E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03120 8329ad9837472e1f894ccf207714cdc7 160 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 9.1E-10 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AYJ52_03120 8329ad9837472e1f894ccf207714cdc7 160 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 9.1E-10 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AYJ52_03120 8329ad9837472e1f894ccf207714cdc7 160 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03120 8329ad9837472e1f894ccf207714cdc7 160 SUPERFAMILY SSF54523 14 116 6.43E-18 T 11-10-2018 AYJ52_03120 8329ad9837472e1f894ccf207714cdc7 160 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 32 5.2E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03120 8329ad9837472e1f894ccf207714cdc7 160 Gene3D G3DSA:3.30.700.10 14 159 3.6E-21 T 11-10-2018 AYJ52_17920 99a9abd676711e0df529b57d3d62c9b9 322 Gene3D G3DSA:3.40.50.1100 17 312 1.2E-119 T 11-10-2018 AYJ52_17920 99a9abd676711e0df529b57d3d62c9b9 322 Gene3D G3DSA:3.40.50.1100 55 151 1.2E-119 T 11-10-2018 AYJ52_17920 99a9abd676711e0df529b57d3d62c9b9 322 SUPERFAMILY SSF53686 8 314 2.88E-95 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_17920 99a9abd676711e0df529b57d3d62c9b9 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 308 5.7E-76 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_17920 99a9abd676711e0df529b57d3d62c9b9 322 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AYJ52_00905 ec244648ece7c0b8ca2ff4a25e0516e9 686 Pfam PF10136 Site-specific recombinase 26 665 2.0E-222 T 11-10-2018 IPR011385 Putative site-specific recombinase Gcr AYJ52_00905 ec244648ece7c0b8ca2ff4a25e0516e9 686 PIRSF PIRSF015380 3 681 1.7E-164 T 11-10-2018 IPR011385 Putative site-specific recombinase Gcr AYJ52_00090 bcaea93866a4f6bb83bdaf9809d9c0a6 810 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 151 783 1.2E-99 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AYJ52_00090 bcaea93866a4f6bb83bdaf9809d9c0a6 810 Pfam PF03772 Competence protein 243 522 3.2E-56 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AYJ52_00090 bcaea93866a4f6bb83bdaf9809d9c0a6 810 Gene3D G3DSA:3.60.15.10 546 797 4.3E-59 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_00090 bcaea93866a4f6bb83bdaf9809d9c0a6 810 Pfam PF00753 Metallo-beta-lactamase superfamily 556 646 1.1E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_00090 bcaea93866a4f6bb83bdaf9809d9c0a6 810 SUPERFAMILY SSF56281 548 797 2.84E-48 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_00090 bcaea93866a4f6bb83bdaf9809d9c0a6 810 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 264 456 3.6E-18 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AYJ52_00090 bcaea93866a4f6bb83bdaf9809d9c0a6 810 Pfam PF13567 Domain of unknown function (DUF4131) 33 188 1.3E-8 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 AYJ52_00090 bcaea93866a4f6bb83bdaf9809d9c0a6 810 SMART SM00849 558 754 6.3E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_03325 732430c18b7241037277425f625064ea 502 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 470 30.511 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AYJ52_03325 732430c18b7241037277425f625064ea 502 Gene3D G3DSA:3.40.50.620 1 327 6.0E-152 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_03325 732430c18b7241037277425f625064ea 502 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_03325 732430c18b7241037277425f625064ea 502 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 468 1.6E-143 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AYJ52_03325 732430c18b7241037277425f625064ea 502 Gene3D G3DSA:1.10.10.350 370 493 1.3E-29 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AYJ52_03325 732430c18b7241037277425f625064ea 502 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 319 6.9E-114 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AYJ52_03325 732430c18b7241037277425f625064ea 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 1.2E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_03325 732430c18b7241037277425f625064ea 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 1.2E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_03325 732430c18b7241037277425f625064ea 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.2E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_03325 732430c18b7241037277425f625064ea 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.2E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_03325 732430c18b7241037277425f625064ea 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.2E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_03325 732430c18b7241037277425f625064ea 502 SUPERFAMILY SSF48163 313 471 2.22E-34 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AYJ52_03325 732430c18b7241037277425f625064ea 502 SUPERFAMILY SSF52374 2 307 1.33E-113 T 11-10-2018 AYJ52_04790 f7c8207d7be03f9c11ce75fb0cc30eac 429 SUPERFAMILY SSF52833 241 422 1.14E-9 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_12285 7f291018cc6ffebbe58b32f86fd36dc4 569 SUPERFAMILY SSF161098 305 553 4.77E-40 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_12285 7f291018cc6ffebbe58b32f86fd36dc4 569 SUPERFAMILY SSF161098 23 282 2.52E-47 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_12285 7f291018cc6ffebbe58b32f86fd36dc4 569 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 376 557 5.0E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_12285 7f291018cc6ffebbe58b32f86fd36dc4 569 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 280 4.7E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_12285 7f291018cc6ffebbe58b32f86fd36dc4 569 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 26 566 1.8E-202 T 11-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative AYJ52_12285 7f291018cc6ffebbe58b32f86fd36dc4 569 Gene3D G3DSA:1.10.3720.10 300 562 2.4E-37 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_12285 7f291018cc6ffebbe58b32f86fd36dc4 569 Gene3D G3DSA:1.10.3720.10 22 284 4.3E-50 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_01200 6c818eaa4c67b2c2c798af0ebaa55443 298 Pfam PF12833 Helix-turn-helix domain 220 294 1.3E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_01200 6c818eaa4c67b2c2c798af0ebaa55443 298 SUPERFAMILY SSF46689 198 247 5.49E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_01200 6c818eaa4c67b2c2c798af0ebaa55443 298 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 182 4.0E-31 T 11-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AYJ52_01200 6c818eaa4c67b2c2c798af0ebaa55443 298 Gene3D G3DSA:1.10.10.60 195 248 1.1E-10 T 11-10-2018 AYJ52_01200 6c818eaa4c67b2c2c798af0ebaa55443 298 SMART SM00342 214 297 7.2E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_01200 6c818eaa4c67b2c2c798af0ebaa55443 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 293 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AYJ52_01200 6c818eaa4c67b2c2c798af0ebaa55443 298 SUPERFAMILY SSF46689 251 295 3.9E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_01200 6c818eaa4c67b2c2c798af0ebaa55443 298 Gene3D G3DSA:1.10.10.60 249 297 2.9E-13 T 11-10-2018 AYJ52_13060 98baa74c2d7c9a2ed980fc7f49592f94 280 Gene3D G3DSA:1.10.3720.10 39 272 2.9E-39 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_13060 98baa74c2d7c9a2ed980fc7f49592f94 280 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 49 117 2.2E-14 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AYJ52_13060 98baa74c2d7c9a2ed980fc7f49592f94 280 SUPERFAMILY SSF161098 52 256 7.19E-32 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_13060 98baa74c2d7c9a2ed980fc7f49592f94 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 271 1.2E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_14050 9d2a00ec1ab330c905d3f3d29bf99d66 551 SUPERFAMILY SSF51905 148 470 2.16E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14050 9d2a00ec1ab330c905d3f3d29bf99d66 551 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 148 270 1.3E-8 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_14050 9d2a00ec1ab330c905d3f3d29bf99d66 551 Gene3D G3DSA:3.50.50.60 150 466 1.7E-93 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14050 9d2a00ec1ab330c905d3f3d29bf99d66 551 Gene3D G3DSA:3.90.190.10 1 138 1.2E-39 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AYJ52_14050 9d2a00ec1ab330c905d3f3d29bf99d66 551 SUPERFAMILY SSF52799 5 99 1.09E-6 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AYJ52_14050 9d2a00ec1ab330c905d3f3d29bf99d66 551 Pfam PF04273 Putative phosphatase (DUF442) 3 109 1.3E-31 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AYJ52_14050 9d2a00ec1ab330c905d3f3d29bf99d66 551 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 134 4.4E-37 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AYJ52_14050 9d2a00ec1ab330c905d3f3d29bf99d66 551 Gene3D G3DSA:3.50.50.60 262 402 1.7E-93 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11825 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_11825 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_11825 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_02290 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_02290 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_02290 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11815 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_11815 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_11815 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_10905 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_10905 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_10905 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_03765 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_03765 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_03765 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_18025 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_18025 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_18025 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_03670 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_03670 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_03670 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11915 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_11915 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_11915 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_00965 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_00965 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_00965 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_03815 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_03815 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_03815 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_00355 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_00355 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_00355 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_03485 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_03485 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_03485 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_06145 253f83bc33d395892e5389b29fd46164 97 Pfam PF01527 Transposase 3 77 9.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_06145 253f83bc33d395892e5389b29fd46164 97 Gene3D G3DSA:1.10.10.60 6 84 1.4E-12 T 11-10-2018 AYJ52_06145 253f83bc33d395892e5389b29fd46164 97 SUPERFAMILY SSF46689 2 89 3.23E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_17505 f5d6b50cd83ffd3f449aa0c7893f700a 228 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 186 213 2.1E-5 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AYJ52_17505 f5d6b50cd83ffd3f449aa0c7893f700a 228 SUPERFAMILY SSF53098 3 201 2.15E-20 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_17505 f5d6b50cd83ffd3f449aa0c7893f700a 228 SMART SM00479 2 170 0.0014 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_17505 f5d6b50cd83ffd3f449aa0c7893f700a 228 Gene3D G3DSA:3.30.420.10 3 184 4.6E-20 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_15935 39075f685022c0ee13199b7b27bae6e0 441 Gene3D G3DSA:1.10.150.20 179 244 3.7E-6 T 11-10-2018 AYJ52_15935 39075f685022c0ee13199b7b27bae6e0 441 Pfam PF13438 Domain of unknown function (DUF4113) 380 430 5.1E-13 T 11-10-2018 IPR025188 Domain of unknown function DUF4113 AYJ52_15935 39075f685022c0ee13199b7b27bae6e0 441 Pfam PF00817 impB/mucB/samB family 12 159 5.3E-29 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AYJ52_15935 39075f685022c0ee13199b7b27bae6e0 441 Gene3D G3DSA:2.30.40.20 17 80 1.0E-34 T 11-10-2018 AYJ52_15935 39075f685022c0ee13199b7b27bae6e0 441 Pfam PF11799 impB/mucB/samB family C-terminal domain 254 362 2.5E-6 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AYJ52_15935 39075f685022c0ee13199b7b27bae6e0 441 SUPERFAMILY SSF56672 8 247 1.33E-56 T 11-10-2018 AYJ52_15935 39075f685022c0ee13199b7b27bae6e0 441 Gene3D G3DSA:3.30.70.270 11 164 1.0E-34 T 11-10-2018 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 Gene3D G3DSA:2.40.30.10 1 100 3.7E-23 T 11-10-2018 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 Pfam PF00970 Oxidoreductase FAD-binding domain 8 98 1.0E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 239 307 3.0E-13 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 266 274 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 Gene3D G3DSA:3.40.50.80 104 221 4.1E-23 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 SUPERFAMILY SSF52343 97 224 7.33E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 29 39 4.7E-36 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 75 89 4.7E-36 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 110 129 4.7E-36 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 39 51 4.7E-36 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 4.7E-36 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 135 144 4.7E-36 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 51 65 4.7E-36 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 Pfam PF00175 Oxidoreductase NAD-binding domain 111 201 5.2E-5 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 SUPERFAMILY SSF63380 3 99 1.23E-21 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 SUPERFAMILY SSF54292 211 315 4.46E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_15050 a65d15c92f7630bf66f8cee427781fe6 317 Gene3D G3DSA:3.10.20.30 222 317 6.7E-25 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_01500 b2dad05713e782e76f08644e4f186686 372 Pfam PF13533 Biotin-lipoyl like 73 120 1.1E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AYJ52_01500 b2dad05713e782e76f08644e4f186686 372 Pfam PF13437 HlyD family secretion protein 183 275 6.2E-19 T 11-10-2018 AYJ52_01500 b2dad05713e782e76f08644e4f186686 372 Gene3D G3DSA:2.40.30.170 60 292 3.2E-50 T 11-10-2018 AYJ52_01500 b2dad05713e782e76f08644e4f186686 372 Gene3D G3DSA:2.40.50.100 72 212 3.2E-50 T 11-10-2018 AYJ52_01500 b2dad05713e782e76f08644e4f186686 372 Gene3D G3DSA:2.40.420.20 51 350 3.2E-50 T 11-10-2018 AYJ52_01500 b2dad05713e782e76f08644e4f186686 372 SUPERFAMILY SSF111369 61 268 2.62E-21 T 11-10-2018 AYJ52_01500 b2dad05713e782e76f08644e4f186686 372 Gene3D G3DSA:1.10.287.470 106 176 3.2E-50 T 11-10-2018 AYJ52_01500 b2dad05713e782e76f08644e4f186686 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 348 2.8E-55 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_03265 8911dab7ab0ce7cc4ea8e8d348f3fb83 352 Gene3D G3DSA:3.30.420.40 188 315 1.3E-86 T 11-10-2018 AYJ52_03265 8911dab7ab0ce7cc4ea8e8d348f3fb83 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 351 9.4E-112 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AYJ52_03265 8911dab7ab0ce7cc4ea8e8d348f3fb83 352 Pfam PF11104 Type IV pilus assembly protein PilM; 14 351 1.4E-135 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AYJ52_03265 8911dab7ab0ce7cc4ea8e8d348f3fb83 352 Gene3D G3DSA:3.30.420.40 13 349 1.3E-86 T 11-10-2018 AYJ52_03265 8911dab7ab0ce7cc4ea8e8d348f3fb83 352 PIRSF PIRSF019169 2 352 1.9E-121 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AYJ52_03265 8911dab7ab0ce7cc4ea8e8d348f3fb83 352 Gene3D G3DSA:3.30.1490.300 88 147 1.3E-86 T 11-10-2018 AYJ52_03265 8911dab7ab0ce7cc4ea8e8d348f3fb83 352 SMART SM00842 12 181 0.0042 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AYJ52_03265 8911dab7ab0ce7cc4ea8e8d348f3fb83 352 SUPERFAMILY SSF53067 192 348 3.95E-24 T 11-10-2018 AYJ52_03265 8911dab7ab0ce7cc4ea8e8d348f3fb83 352 SUPERFAMILY SSF53067 13 178 3.02E-13 T 11-10-2018 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 SMART SM00316 138 203 1.4E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 Gene3D G3DSA:1.10.150.20 358 427 1.1E-15 T 11-10-2018 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 Gene3D G3DSA:3.30.300.20 283 352 5.5E-20 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 SUPERFAMILY SSF69705 1 130 1.11E-32 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 Pfam PF13184 NusA-like KH domain 235 301 1.2E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 Gene3D G3DSA:1.10.150.20 434 492 1.3E-21 T 11-10-2018 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 SUPERFAMILY SSF50249 137 204 1.06E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 Pfam PF08529 NusA N-terminal domain 4 128 1.3E-34 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 27.912 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 Gene3D G3DSA:3.30.1480.10 1 133 7.4E-35 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 SUPERFAMILY SSF54814 206 283 1.24E-28 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 Pfam PF14520 Helix-hairpin-helix domain 435 490 1.1E-9 T 11-10-2018 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 Gene3D G3DSA:3.30.300.20 204 282 3.0E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 SUPERFAMILY SSF54814 284 345 7.19E-10 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 SUPERFAMILY SSF47794 360 421 2.04E-9 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 SUPERFAMILY SSF47794 427 493 7.85E-15 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 2.8E-109 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 AYJ52_06900 8903a0f8f841ca7187c8b0b08bd67e74 494 Gene3D G3DSA:2.40.50.140 140 203 2.0E-15 T 11-10-2018 AYJ52_17930 22aa8e408a9f7916301a5b9026ed1718 206 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 45 133 1.5E-11 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AYJ52_17930 22aa8e408a9f7916301a5b9026ed1718 206 Gene3D G3DSA:3.40.220.10 15 175 9.3E-19 T 11-10-2018 AYJ52_17930 22aa8e408a9f7916301a5b9026ed1718 206 SUPERFAMILY SSF52949 35 131 5.89E-14 T 11-10-2018 AYJ52_14745 639fcfc9aa1c435708193592c9eb5fdf 62 Gene3D G3DSA:3.40.1620.10 1 52 1.2E-12 T 11-10-2018 AYJ52_14745 639fcfc9aa1c435708193592c9eb5fdf 62 SUPERFAMILY SSF143120 2 60 1.7E-9 T 11-10-2018 IPR036165 YefM-like superfamily AYJ52_14745 639fcfc9aa1c435708193592c9eb5fdf 62 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 58 1.1E-8 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Gene3D G3DSA:3.20.20.20 337 645 4.0E-132 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 SUPERFAMILY SSF47644 653 740 4.84E-28 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Pfam PF02310 B12 binding domain 749 842 4.8E-18 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 SUPERFAMILY SSF82282 6 396 1.44E-117 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Pfam PF02607 B12 binding domain 660 733 2.0E-23 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Pfam PF02574 Homocysteine S-methyltransferase 16 322 3.5E-79 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 PIRSF PIRSF000381 1 1196 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 SUPERFAMILY SSF56507 907 1224 7.72E-115 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Gene3D G3DSA:1.10.1240.10 650 738 1.1E-39 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 TIGRFAM TIGR02082 metH: methionine synthase 12 1193 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Gene3D G3DSA:3.20.20.330 2 336 7.7E-128 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Pfam PF00809 Pterin binding enzyme 357 595 5.1E-56 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Gene3D G3DSA:3.40.50.280 744 897 1.2E-54 T 11-10-2018 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Gene3D G3DSA:3.10.196.10 914 1223 5.0E-125 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Gene3D G3DSA:1.10.288.10 938 1093 5.0E-125 T 11-10-2018 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 SUPERFAMILY SSF51717 353 621 2.35E-90 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 SMART SM01018 658 741 1.8E-43 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 SUPERFAMILY SSF52242 744 895 9.81E-45 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AYJ52_10295 4670d2dcc9d114eca2496b735dabac3e 1228 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1209 1.1E-112 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_00995 579e860e6342c4bde4d34f49c5f163f2 395 ProSitePatterns PS01219 Ammonium transporters signature. 152 177 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AYJ52_00995 579e860e6342c4bde4d34f49c5f163f2 395 Gene3D G3DSA:1.10.3430.10 1 394 3.2E-97 T 11-10-2018 IPR029020 Ammonium/urea transporter AYJ52_00995 579e860e6342c4bde4d34f49c5f163f2 395 Pfam PF00909 Ammonium Transporter Family 8 386 4.0E-84 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AYJ52_00995 579e860e6342c4bde4d34f49c5f163f2 395 SUPERFAMILY SSF111352 2 370 5.75E-94 T 11-10-2018 AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 1.9E-43 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 1.9E-43 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 1.9E-43 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 1.9E-43 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 1.9E-43 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 SUPERFAMILY SSF51430 2 262 4.85E-81 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 Gene3D G3DSA:3.20.20.100 1 267 1.5E-91 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 Pfam PF00248 Aldo/keto reductase family 8 251 8.2E-49 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 PIRSF PIRSF000097 1 106 2.4E-33 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AYJ52_04720 8ff8c143c7c35f2a9fad11ad4dd7cd37 267 PIRSF PIRSF000097 102 265 5.5E-36 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 SUPERFAMILY SSF47005 350 394 6.54E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 134 163 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 SUPERFAMILY SSF51230 224 316 7.46E-23 T 11-10-2018 IPR011053 Single hybrid motif AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 Pfam PF02817 e3 binding domain 355 389 1.0E-11 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 Gene3D G3DSA:4.10.320.10 345 395 2.2E-16 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 Gene3D G3DSA:2.40.50.100 225 302 8.9E-20 T 11-10-2018 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 Gene3D G3DSA:2.40.50.100 1 78 8.2E-20 T 11-10-2018 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 SUPERFAMILY SSF51230 2 91 1.7E-21 T 11-10-2018 IPR011053 Single hybrid motif AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 Gene3D G3DSA:3.30.559.10 411 654 2.0E-77 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 428 653 9.2E-67 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 SUPERFAMILY SSF52777 417 654 8.01E-71 T 11-10-2018 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 Pfam PF00364 Biotin-requiring enzyme 226 296 2.4E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 Pfam PF00364 Biotin-requiring enzyme 2 72 7.1E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 Pfam PF00364 Biotin-requiring enzyme 113 182 2.4E-15 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 SUPERFAMILY SSF51230 110 201 1.05E-19 T 11-10-2018 IPR011053 Single hybrid motif AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 Gene3D G3DSA:2.40.50.100 112 188 1.4E-15 T 11-10-2018 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 23 52 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AYJ52_04095 9d630e0c777658459a7e38b9677bff1a 654 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 247 276 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AYJ52_06455 793d37d1bf0a7795cdb129f9b486a54c 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 344 368 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_06455 793d37d1bf0a7795cdb129f9b486a54c 398 Pfam PF01098 Cell cycle protein 33 386 6.7E-101 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_06455 793d37d1bf0a7795cdb129f9b486a54c 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 384 1.7E-123 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_06455 793d37d1bf0a7795cdb129f9b486a54c 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 28 396 38.166 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 PIRSF PIRSF001553 1 293 2.7E-129 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 Gene3D G3DSA:3.40.50.261 126 291 1.6E-73 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 Pfam PF02629 CoA binding domain 6 99 2.3E-30 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 290 2.1E-137 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 Gene3D G3DSA:3.40.50.720 1 125 7.0E-49 T 11-10-2018 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 290 42.989 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 2.9E-36 T 11-10-2018 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 2.9E-36 T 11-10-2018 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 2.9E-36 T 11-10-2018 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.9E-36 T 11-10-2018 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 SMART SM00881 4 100 2.9E-36 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 SUPERFAMILY SSF51735 1 124 3.15E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 Pfam PF00549 CoA-ligase 153 271 4.4E-18 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AYJ52_00725 db36b395b583fe1497dd4fd8e96271d9 296 SUPERFAMILY SSF52210 125 289 1.44E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AYJ52_09585 4fc14f3336e6e064cf3f35c14a4b6375 350 SUPERFAMILY SSF55120 109 344 6.17E-75 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_09585 4fc14f3336e6e064cf3f35c14a4b6375 350 Gene3D G3DSA:3.30.2350.10 115 347 4.5E-68 T 11-10-2018 AYJ52_09585 4fc14f3336e6e064cf3f35c14a4b6375 350 Gene3D G3DSA:3.10.290.10 34 107 5.1E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AYJ52_09585 4fc14f3336e6e064cf3f35c14a4b6375 350 Pfam PF00849 RNA pseudouridylate synthase 123 272 4.7E-31 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_09585 4fc14f3336e6e064cf3f35c14a4b6375 350 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 166 180 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_09585 4fc14f3336e6e064cf3f35c14a4b6375 350 SUPERFAMILY SSF55174 48 136 1.4E-8 T 11-10-2018 AYJ52_09585 4fc14f3336e6e064cf3f35c14a4b6375 350 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 48 344 1.5E-90 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_09585 4fc14f3336e6e064cf3f35c14a4b6375 350 Pfam PF01479 S4 domain 64 92 6.0E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_10055 6a83837d62ed920f91f7fe6e1314a6c9 546 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 41 524 4.9E-218 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AYJ52_10055 6a83837d62ed920f91f7fe6e1314a6c9 546 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 37 524 49.299 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AYJ52_10055 6a83837d62ed920f91f7fe6e1314a6c9 546 SUPERFAMILY SSF51905 39 360 9.07E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10055 6a83837d62ed920f91f7fe6e1314a6c9 546 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 41 522 2.2E-191 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 SUPERFAMILY SSF51735 6 260 1.32E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 Gene3D G3DSA:3.40.50.720 1 261 1.9E-81 T 11-10-2018 AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 8 261 4.2E-109 T 11-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 259 8.3E-65 T 11-10-2018 AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14180 ff13a72eeb4f7bf041b9b4d4eb201997 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11170 d3defc635a67f2a42d230e78043eba58 388 SUPERFAMILY SSF55681 7 319 2.03E-46 T 11-10-2018 AYJ52_11170 d3defc635a67f2a42d230e78043eba58 388 Pfam PF13393 Histidyl-tRNA synthetase 12 322 1.7E-99 T 11-10-2018 AYJ52_11170 d3defc635a67f2a42d230e78043eba58 388 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 367 26.257 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 AYJ52_11170 d3defc635a67f2a42d230e78043eba58 388 PIRSF PIRSF001549 6 359 2.3E-31 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AYJ52_11170 d3defc635a67f2a42d230e78043eba58 388 PIRSF PIRSF001549 318 379 260.0 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AYJ52_11170 d3defc635a67f2a42d230e78043eba58 388 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 15 322 1.2E-81 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 AYJ52_11170 d3defc635a67f2a42d230e78043eba58 388 Gene3D G3DSA:3.30.930.10 4 326 2.0E-56 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 Gene3D G3DSA:3.30.70.1430 571 672 0.0 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 Pfam PF00873 AcrB/AcrD/AcrF family 1 1040 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 SUPERFAMILY SSF82714 182 272 1.96E-23 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 3.0E-111 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.0E-111 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.0E-111 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 3.0E-111 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.0E-111 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.0E-111 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.0E-111 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.0E-111 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.0E-111 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 Gene3D G3DSA:3.30.2090.10 725 813 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 SUPERFAMILY SSF82714 726 813 6.15E-23 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1053 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 SUPERFAMILY SSF82693 38 131 1.29E-28 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 Gene3D G3DSA:3.30.70.1440 673 873 0.0 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 SUPERFAMILY SSF82866 810 1042 3.79E-43 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 SUPERFAMILY SSF82866 296 497 1.44E-46 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 SUPERFAMILY SSF82693 569 665 9.94E-24 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 Gene3D G3DSA:1.20.1640.10 8 516 0.0 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 Gene3D G3DSA:3.30.70.1430 38 821 0.0 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 Gene3D G3DSA:1.20.1640.10 517 1037 0.0 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 SUPERFAMILY SSF82693 135 330 1.57E-23 T 11-10-2018 AYJ52_00920 883d87424beb5f2e640ef28bee8c5113 1058 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SUPERFAMILY SSF50249 255 371 5.59E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SUPERFAMILY SSF50249 189 277 2.69E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Gene3D G3DSA:2.40.50.140 5 99 3.7E-17 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Gene3D G3DSA:2.40.50.140 100 183 6.2E-9 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SUPERFAMILY SSF50249 342 440 1.36E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Pfam PF00575 S1 RNA binding domain 189 260 2.4E-22 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Pfam PF00575 S1 RNA binding domain 102 171 4.6E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Pfam PF00575 S1 RNA binding domain 18 86 3.6E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Pfam PF00575 S1 RNA binding domain 361 434 3.0E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Pfam PF00575 S1 RNA binding domain 450 520 1.9E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.7E-210 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SMART SM00316 190 260 5.8E-30 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SMART SM00316 449 520 6.7E-20 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SMART SM00316 19 87 3.8E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SMART SM00316 275 347 1.9E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SMART SM00316 103 171 3.8E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SMART SM00316 362 434 8.0E-22 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SUPERFAMILY SSF50249 2 112 4.85E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_13525 7270693c9d04b542432cbe3929865352 557 PIRSF PIRSF002111 1 534 1.2E-212 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SUPERFAMILY SSF50249 103 184 8.58E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Gene3D G3DSA:2.40.50.140 445 528 4.4E-20 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Gene3D G3DSA:2.40.50.140 187 268 2.0E-29 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 SUPERFAMILY SSF50249 429 533 2.46E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Gene3D G3DSA:2.40.50.140 358 444 4.0E-25 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 Gene3D G3DSA:2.40.50.140 269 357 1.5E-28 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.6E-86 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.6E-86 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.6E-86 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.6E-86 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.6E-86 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.6E-86 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.6E-86 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.6E-86 T 11-10-2018 AYJ52_13525 7270693c9d04b542432cbe3929865352 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.6E-86 T 11-10-2018 AYJ52_11025 bcb2735079d5586a873226487bed4941 358 SUPERFAMILY SSF55961 117 342 7.85E-57 T 11-10-2018 AYJ52_11025 bcb2735079d5586a873226487bed4941 358 Gene3D G3DSA:3.30.530.90 131 347 1.4E-64 T 11-10-2018 AYJ52_11025 bcb2735079d5586a873226487bed4941 358 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 47 69 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 AYJ52_11025 bcb2735079d5586a873226487bed4941 358 SUPERFAMILY SSF50022 2 111 7.86E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_11025 bcb2735079d5586a873226487bed4941 358 Pfam PF00355 Rieske [2Fe-2S] domain 7 86 2.9E-18 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AYJ52_11025 bcb2735079d5586a873226487bed4941 358 Gene3D G3DSA:2.102.10.10 3 130 1.7E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 6.0E-117 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 786 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 Gene3D G3DSA:3.20.20.60 477 789 3.4E-104 T 11-10-2018 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 479 780 1.2E-63 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 382 454 4.5E-26 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 Gene3D G3DSA:3.30.470.20 193 356 9.9E-58 T 11-10-2018 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 Gene3D G3DSA:3.30.1490.20 2 192 1.9E-71 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 PIRSF PIRSF000854 2 792 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 Gene3D G3DSA:3.50.30.10 357 476 4.9E-42 T 11-10-2018 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 SUPERFAMILY SSF56059 4 383 2.03E-104 T 11-10-2018 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 SUPERFAMILY SSF51621 460 790 1.33E-101 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AYJ52_16695 79377d71a6656981266e4d989b39c51a 792 SUPERFAMILY SSF52009 347 466 1.23E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AYJ52_01210 4a0b00c769109c3d180a371baa581a91 266 Pfam PF08223 PaaX-like protein C-terminal domain 171 257 5.2E-7 T 11-10-2018 IPR013225 PaaX-like, C-terminal AYJ52_01210 4a0b00c769109c3d180a371baa581a91 266 Gene3D G3DSA:1.10.10.10 4 74 2.6E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_04735 f20d67472f76c1dd96de0c52882dc764 273 Gene3D G3DSA:3.40.50.720 7 266 4.4E-102 T 11-10-2018 AYJ52_04735 f20d67472f76c1dd96de0c52882dc764 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 127 4.4E-42 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_04735 f20d67472f76c1dd96de0c52882dc764 273 SUPERFAMILY SSF55347 129 238 2.62E-37 T 11-10-2018 AYJ52_04735 f20d67472f76c1dd96de0c52882dc764 273 Gene3D G3DSA:3.30.360.10 129 236 4.4E-102 T 11-10-2018 AYJ52_04735 f20d67472f76c1dd96de0c52882dc764 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 266 2.4E-41 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_04735 f20d67472f76c1dd96de0c52882dc764 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 267 35.041 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_04735 f20d67472f76c1dd96de0c52882dc764 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 267 2.4E-98 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_04735 f20d67472f76c1dd96de0c52882dc764 273 SUPERFAMILY SSF51735 5 270 1.26E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_04735 f20d67472f76c1dd96de0c52882dc764 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 152 169 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_04735 f20d67472f76c1dd96de0c52882dc764 273 PIRSF PIRSF000161 3 270 8.4E-86 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_19460 67aa72129d1adaf8b224f27df9cbfe6e 110 SMART SM00528 65 110 3.1E-15 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AYJ52_19460 67aa72129d1adaf8b224f27df9cbfe6e 110 SUPERFAMILY SSF81273 68 110 2.16E-12 T 11-10-2018 AYJ52_19460 67aa72129d1adaf8b224f27df9cbfe6e 110 Gene3D G3DSA:4.10.430.10 59 110 1.6E-17 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AYJ52_19460 67aa72129d1adaf8b224f27df9cbfe6e 110 Pfam PF00816 H-NS histone family 14 103 2.9E-20 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AYJ52_00610 132fa03f96be73daadf3cf7db04fe4e7 216 Pfam PF01728 FtsJ-like methyltransferase 35 210 3.2E-58 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AYJ52_00610 132fa03f96be73daadf3cf7db04fe4e7 216 PIRSF PIRSF005461 3 216 2.2E-80 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AYJ52_00610 132fa03f96be73daadf3cf7db04fe4e7 216 SUPERFAMILY SSF53335 34 212 3.08E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_00610 132fa03f96be73daadf3cf7db04fe4e7 216 Gene3D G3DSA:3.40.50.150 31 215 8.3E-61 T 11-10-2018 AYJ52_00610 132fa03f96be73daadf3cf7db04fe4e7 216 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 19 212 30.905 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AYJ52_14665 f835da7e729c5e056318bfe43acf3bf8 525 Pfam PF07690 Major Facilitator Superfamily 13 408 7.8E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_14665 f835da7e729c5e056318bfe43acf3bf8 525 SUPERFAMILY SSF103473 7 505 2.49E-27 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_14665 f835da7e729c5e056318bfe43acf3bf8 525 Gene3D G3DSA:1.20.1250.20 3 192 5.3E-16 T 11-10-2018 AYJ52_14665 f835da7e729c5e056318bfe43acf3bf8 525 Gene3D G3DSA:1.20.1250.20 193 426 1.3E-6 T 11-10-2018 AYJ52_02655 ad6a0090cbc31384123c28333117dcc5 137 Gene3D G3DSA:3.90.1170.10 1 137 1.4E-55 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_02655 ad6a0090cbc31384123c28333117dcc5 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02655 ad6a0090cbc31384123c28333117dcc5 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 36.917 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02655 ad6a0090cbc31384123c28333117dcc5 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.3E-36 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02655 ad6a0090cbc31384123c28333117dcc5 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.3E-36 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02655 ad6a0090cbc31384123c28333117dcc5 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.3E-36 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02655 ad6a0090cbc31384123c28333117dcc5 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.3E-36 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02655 ad6a0090cbc31384123c28333117dcc5 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.4E-47 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AYJ52_02655 ad6a0090cbc31384123c28333117dcc5 137 SUPERFAMILY SSF54686 1 134 4.45E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_02655 ad6a0090cbc31384123c28333117dcc5 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.4E-57 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 Pfam PF09371 Tex-like protein N-terminal domain 8 189 2.0E-54 T 11-10-2018 IPR018974 Tex-like protein, N-terminal AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 Pfam PF12836 Helix-hairpin-helix motif 482 546 4.4E-26 T 11-10-2018 AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 SUPERFAMILY SSF50249 628 716 1.27E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 Pfam PF16921 Tex protein YqgF-like domain 317 442 1.1E-49 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 SUPERFAMILY SSF158832 1 311 3.27E-88 T 11-10-2018 AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 Pfam PF00575 S1 RNA binding domain 640 711 2.5E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 Gene3D G3DSA:3.30.420.140 315 442 7.2E-135 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 SUPERFAMILY SSF47781 461 549 1.67E-26 T 11-10-2018 IPR010994 RuvA domain 2-like AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 SUPERFAMILY SSF53098 312 460 4.02E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 Gene3D G3DSA:1.10.150.310 490 621 7.0E-49 T 11-10-2018 AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 SUPERFAMILY SSF47781 552 623 2.89E-19 T 11-10-2018 IPR010994 RuvA domain 2-like AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 Gene3D G3DSA:1.10.3500.10 112 489 7.2E-135 T 11-10-2018 IPR023323 Tex-like domain superfamily AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 Gene3D G3DSA:2.40.50.140 622 715 3.5E-29 T 11-10-2018 AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 SMART SM00732 316 415 6.9E-31 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 Gene3D G3DSA:1.10.10.650 1 108 2.5E-36 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily AYJ52_03455 cd5dc6b9072f374ea5bdcd521d9e0a22 782 SMART SM00316 640 711 4.1E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 598 3.1E-74 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 SUPERFAMILY SSF81653 109 205 4.84E-20 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 SUPERFAMILY SSF81665 33 661 3.4E-9 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 21 671 1.4E-290 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 Gene3D G3DSA:2.70.150.20 102 209 6.7E-25 T 11-10-2018 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 12 675 38.437 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 546 6.2E-23 T 11-10-2018 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 303 317 6.2E-23 T 11-10-2018 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 152 166 6.2E-23 T 11-10-2018 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 468 6.2E-23 T 11-10-2018 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 511 530 6.2E-23 T 11-10-2018 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 Pfam PF00702 haloacid dehalogenase-like hydrolase 299 525 1.5E-36 T 11-10-2018 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 SUPERFAMILY SSF56784 291 554 1.65E-41 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 Gene3D G3DSA:3.40.1110.10 317 441 1.0E-41 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 Pfam PF00122 E1-E2 ATPase 103 282 3.3E-31 T 11-10-2018 AYJ52_16565 60b9aa3b96bd5a4a83265f0859813ffe 677 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 305 311 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AYJ52_10490 8c6767e628765d39cdf980027f492666 102 Gene3D G3DSA:2.10.150.10 1 102 9.4E-48 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10490 8c6767e628765d39cdf980027f492666 102 Pfam PF00699 Urease beta subunit 3 100 1.5E-45 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10490 8c6767e628765d39cdf980027f492666 102 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 1.6E-46 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10490 8c6767e628765d39cdf980027f492666 102 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.781 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10490 8c6767e628765d39cdf980027f492666 102 SUPERFAMILY SSF51278 1 102 2.62E-47 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 1.1E-41 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 SUPERFAMILY SSF55347 127 274 8.83E-60 T 11-10-2018 AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 6.6E-43 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 PIRSF PIRSF006205 2 397 2.6E-149 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 SUPERFAMILY SSF69055 301 395 5.1E-32 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 394 3.2E-146 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 SUPERFAMILY SSF51735 3 151 8.42E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 Gene3D G3DSA:1.10.1740.10 312 398 2.1E-32 T 11-10-2018 AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 Gene3D G3DSA:3.40.50.720 1 151 3.4E-55 T 11-10-2018 AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 392 45.126 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AYJ52_15680 ab97b5d048ec15dc446c8e1207a6da08 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 239 5.0E-38 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AYJ52_18455 2a25ff089d7587fb54e095f17f7b4289 416 SUPERFAMILY SSF53448 42 317 1.5E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_18455 2a25ff089d7587fb54e095f17f7b4289 416 Pfam PF13641 Glycosyltransferase like family 2 52 278 3.3E-35 T 11-10-2018 AYJ52_18455 2a25ff089d7587fb54e095f17f7b4289 416 Gene3D G3DSA:3.90.550.10 29 269 1.0E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 Gene3D G3DSA:3.40.50.300 548 762 2.6E-88 T 11-10-2018 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 5.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 5.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 5.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 5.7E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 SUPERFAMILY SSF52540 157 543 6.55E-98 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 SMART SM01086 764 853 9.2E-36 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 843 1.0E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 Gene3D G3DSA:3.40.50.300 345 542 1.7E-65 T 11-10-2018 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 Gene3D G3DSA:1.10.8.60 764 858 4.8E-27 T 11-10-2018 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 200 331 1.8E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 Gene3D G3DSA:1.10.1780.10 1 145 2.3E-28 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 757 3.1E-56 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 SUPERFAMILY SSF52540 544 851 6.6E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 SMART SM00382 595 745 7.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 SMART SM00382 195 340 5.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 66 6.9E-5 T 11-10-2018 IPR004176 Clp, N-terminal AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 92 142 1.7E-10 T 11-10-2018 IPR004176 Clp, N-terminal AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 Gene3D G3DSA:3.40.50.300 155 344 3.2E-74 T 11-10-2018 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 291 303 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AYJ52_11215 ecbe127f911c4bcf793627cd39291116 859 SUPERFAMILY SSF81923 4 153 8.04E-35 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AYJ52_15495 ce01bfd6176d270e40fe762f0001d8e6 299 Gene3D G3DSA:1.10.10.10 3 90 9.0E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15495 ce01bfd6176d270e40fe762f0001d8e6 299 SUPERFAMILY SSF53850 90 298 1.63E-42 T 11-10-2018 AYJ52_15495 ce01bfd6176d270e40fe762f0001d8e6 299 SUPERFAMILY SSF46785 4 86 7.39E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_15495 ce01bfd6176d270e40fe762f0001d8e6 299 Gene3D G3DSA:3.40.190.10 166 267 4.1E-56 T 11-10-2018 AYJ52_15495 ce01bfd6176d270e40fe762f0001d8e6 299 Pfam PF03466 LysR substrate binding domain 90 296 1.3E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_15495 ce01bfd6176d270e40fe762f0001d8e6 299 Gene3D G3DSA:3.40.190.10 92 294 4.1E-56 T 11-10-2018 AYJ52_15495 ce01bfd6176d270e40fe762f0001d8e6 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.7E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_11200 437b8478db1b7f449d19378f132519f2 140 Gene3D G3DSA:2.20.25.10 1 32 1.3E-7 T 11-10-2018 AYJ52_11200 437b8478db1b7f449d19378f132519f2 140 Pfam PF02566 OsmC-like protein 33 132 1.3E-19 T 11-10-2018 IPR003718 OsmC/Ohr family AYJ52_11200 437b8478db1b7f449d19378f132519f2 140 Gene3D G3DSA:3.30.300.20 39 139 4.5E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_11200 437b8478db1b7f449d19378f132519f2 140 SUPERFAMILY SSF82784 1 138 6.41E-40 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AYJ52_00985 0832339794fa238022e1957e4faab3ae 301 Pfam PF03547 Membrane transport protein 153 297 1.3E-11 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AYJ52_00985 0832339794fa238022e1957e4faab3ae 301 Gene3D G3DSA:1.20.1530.20 156 301 1.5E-7 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.2E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.2E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.2E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.2E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.2E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.2E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 SUPERFAMILY SSF82693 46 126 5.49E-20 T 11-10-2018 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 SUPERFAMILY SSF82866 294 506 1.7E-38 T 11-10-2018 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 Gene3D G3DSA:1.20.1640.10 12 515 1.4E-260 T 11-10-2018 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 Gene3D G3DSA:3.30.2090.10 721 809 1.4E-260 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 SUPERFAMILY SSF82866 805 1044 2.22E-43 T 11-10-2018 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 Pfam PF00873 AcrB/AcrD/AcrF family 5 1040 2.0E-242 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1044 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 SUPERFAMILY SSF82693 137 328 2.22E-22 T 11-10-2018 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 SUPERFAMILY SSF82714 723 807 7.59E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 Gene3D G3DSA:1.20.1640.10 516 1037 1.4E-260 T 11-10-2018 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 Gene3D G3DSA:3.30.70.1430 567 666 1.4E-260 T 11-10-2018 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 Gene3D G3DSA:3.30.70.1440 667 867 1.4E-260 T 11-10-2018 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 Gene3D G3DSA:3.30.2090.10 181 272 1.4E-260 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 SUPERFAMILY SSF82714 185 270 5.49E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 Gene3D G3DSA:3.30.70.1430 42 817 1.4E-260 T 11-10-2018 AYJ52_08320 f3d88ae599201c0f6922c7ea61e660fe 1048 Gene3D G3DSA:3.30.70.1320 135 330 1.4E-260 T 11-10-2018 AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 Pfam PF03958 Bacterial type II/III secretion system short domain 360 455 3.3E-13 T 11-10-2018 IPR005644 NolW-like AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 Pfam PF00263 Bacterial type II and III secretion system protein 555 713 4.8E-50 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 Gene3D G3DSA:2.60.40.3470 124 247 4.2E-28 T 11-10-2018 AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 SMART SM00965 286 334 5.5E-11 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 261 714 8.3E-165 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 Pfam PF07660 Secretin and TonB N terminus short domain 291 333 2.5E-9 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 Gene3D G3DSA:2.60.40.3500 18 123 2.7E-5 T 11-10-2018 AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 551 575 1.8E-18 T 11-10-2018 IPR001775 GspD/PilQ family AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 678 696 1.8E-18 T 11-10-2018 IPR001775 GspD/PilQ family AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 455 465 1.8E-18 T 11-10-2018 IPR001775 GspD/PilQ family AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 701 715 1.8E-18 T 11-10-2018 IPR001775 GspD/PilQ family AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 Gene3D G3DSA:3.55.50.30 261 331 3.8E-9 T 11-10-2018 AYJ52_03245 86125bbc29ae3e1caafdb98e92775a26 721 Pfam PF11741 AMIN domain 40 114 2.3E-7 T 11-10-2018 IPR021731 AMIN domain AYJ52_13850 4a14bed0c2a5e40dea3fed5a11b166d6 699 Gene3D G3DSA:2.40.170.20 178 699 5.2E-123 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_13850 4a14bed0c2a5e40dea3fed5a11b166d6 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 696 7.1E-90 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_13850 4a14bed0c2a5e40dea3fed5a11b166d6 699 SUPERFAMILY SSF56935 25 699 1.26E-108 T 11-10-2018 AYJ52_13850 4a14bed0c2a5e40dea3fed5a11b166d6 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 161 4.2E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_13850 4a14bed0c2a5e40dea3fed5a11b166d6 699 Pfam PF00593 TonB dependent receptor 246 698 1.9E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_13850 4a14bed0c2a5e40dea3fed5a11b166d6 699 Gene3D G3DSA:2.170.130.10 45 177 2.0E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 836 23.687 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Gene3D G3DSA:3.10.20.310 271 347 1.3E-14 T 11-10-2018 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Gene3D G3DSA:3.10.20.310 179 270 2.3E-19 T 11-10-2018 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Gene3D G3DSA:2.40.160.50 431 836 1.1E-109 T 11-10-2018 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Gene3D G3DSA:3.10.20.310 352 429 1.9E-23 T 11-10-2018 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Pfam PF07244 Surface antigen variable number repeat 29 95 1.1E-4 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Pfam PF07244 Surface antigen variable number repeat 97 176 1.5E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Pfam PF07244 Surface antigen variable number repeat 180 267 1.2E-12 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Pfam PF07244 Surface antigen variable number repeat 271 348 9.8E-12 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Pfam PF07244 Surface antigen variable number repeat 351 425 4.9E-15 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Pfam PF01103 Surface antigen 452 836 8.8E-75 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Gene3D G3DSA:3.10.20.310 22 95 6.2E-17 T 11-10-2018 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 Gene3D G3DSA:3.10.20.310 96 177 4.0E-16 T 11-10-2018 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 28 836 2.8E-236 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AYJ52_15670 1b407d2a169e1702f3db9dca11e90b37 836 PIRSF PIRSF006076 1 836 6.4E-245 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AYJ52_06520 54829f6281d626e5f023ba98a6137a3c 379 Pfam PF06580 Histidine kinase 187 264 2.2E-23 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AYJ52_06520 54829f6281d626e5f023ba98a6137a3c 379 SUPERFAMILY SSF55874 240 355 4.51E-5 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_06520 54829f6281d626e5f023ba98a6137a3c 379 Gene3D G3DSA:3.30.565.10 240 371 3.2E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_08285 d8508ddefe95e61dbf29beeb90a0d34b 227 SUPERFAMILY SSF46894 122 223 8.22E-29 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_08285 d8508ddefe95e61dbf29beeb90a0d34b 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 5.8E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_08285 d8508ddefe95e61dbf29beeb90a0d34b 227 Pfam PF00072 Response regulator receiver domain 3 113 1.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_08285 d8508ddefe95e61dbf29beeb90a0d34b 227 SMART SM00862 146 221 1.0E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_08285 d8508ddefe95e61dbf29beeb90a0d34b 227 SMART SM00448 1 112 2.1E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_08285 d8508ddefe95e61dbf29beeb90a0d34b 227 Gene3D G3DSA:1.10.10.10 124 227 1.6E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_08285 d8508ddefe95e61dbf29beeb90a0d34b 227 SUPERFAMILY SSF52172 1 118 1.04E-38 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_08285 d8508ddefe95e61dbf29beeb90a0d34b 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 1.1E-101 T 11-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AYJ52_08285 d8508ddefe95e61dbf29beeb90a0d34b 227 Gene3D G3DSA:3.40.50.2300 1 121 2.3E-40 T 11-10-2018 AYJ52_08605 99b56aabbc054c386eba730292f4329e 189 Pfam PF02325 YGGT family 11 79 2.4E-5 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AYJ52_08605 99b56aabbc054c386eba730292f4329e 189 Pfam PF02325 YGGT family 108 177 8.1E-16 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AYJ52_02450 f596c4eb282896f7e4fcf1a42de70b44 197 Gene3D G3DSA:3.40.50.360 1 196 3.4E-63 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_02450 f596c4eb282896f7e4fcf1a42de70b44 197 Pfam PF03358 NADPH-dependent FMN reductase 12 126 1.7E-9 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AYJ52_02450 f596c4eb282896f7e4fcf1a42de70b44 197 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AYJ52_02450 f596c4eb282896f7e4fcf1a42de70b44 197 SUPERFAMILY SSF52218 4 195 1.65E-60 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_02450 f596c4eb282896f7e4fcf1a42de70b44 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 5 195 1.3E-46 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 SUPERFAMILY SSF63380 7 101 6.45E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 Gene3D G3DSA:3.40.50.80 99 253 2.4E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 Gene3D G3DSA:2.40.30.10 1 97 6.1E-30 T 11-10-2018 AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 5.2E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 53 60 5.2E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 115 134 5.2E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 Pfam PF00970 Oxidoreductase FAD-binding domain 20 99 9.6E-9 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 SUPERFAMILY SSF52343 109 251 5.89E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 Pfam PF00175 Oxidoreductase NAD-binding domain 116 229 1.2E-13 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 140 149 7.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 7.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 7.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_09215 8e8c75eb5fce07b0e26fbc5c33dcecf7 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 115 134 7.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_18745 abc110895d664b9be0767c65b118b929 205 Pfam PF01467 Cytidylyltransferase-like 22 75 6.8E-7 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AYJ52_18745 abc110895d664b9be0767c65b118b929 205 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 22 80 9.2E-10 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AYJ52_18745 abc110895d664b9be0767c65b118b929 205 SUPERFAMILY SSF52374 22 187 6.48E-22 T 11-10-2018 AYJ52_18745 abc110895d664b9be0767c65b118b929 205 Gene3D G3DSA:3.40.50.620 13 200 8.3E-52 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_18150 7cd0d1e38869249b4ad49db603ada747 321 PIRSF PIRSF026166 1 321 1.7E-121 T 11-10-2018 IPR016833 Putative sodium bile acid cotransporter AYJ52_18150 7cd0d1e38869249b4ad49db603ada747 321 Gene3D G3DSA:1.20.1530.20 2 319 3.6E-29 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AYJ52_18150 7cd0d1e38869249b4ad49db603ada747 321 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 317 3.3E-91 T 11-10-2018 IPR016833 Putative sodium bile acid cotransporter AYJ52_17290 a4cd244124112ac5759e0bb399ab4c57 532 SUPERFAMILY SSF52540 187 437 1.02E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17290 a4cd244124112ac5759e0bb399ab4c57 532 Gene3D G3DSA:3.40.50.300 169 359 2.8E-51 T 11-10-2018 AYJ52_17290 a4cd244124112ac5759e0bb399ab4c57 532 PIRSF PIRSF037354 4 532 3.2E-234 T 11-10-2018 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 AYJ52_17290 a4cd244124112ac5759e0bb399ab4c57 532 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 5 183 1.7E-79 T 11-10-2018 IPR009715 Regulator of RNA terminal phosphate cyclase AYJ52_17290 a4cd244124112ac5759e0bb399ab4c57 532 Pfam PF00158 Sigma-54 interaction domain 186 353 9.6E-51 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AYJ52_17290 a4cd244124112ac5759e0bb399ab4c57 532 SMART SM00382 206 352 2.0E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_17290 a4cd244124112ac5759e0bb399ab4c57 532 Gene3D G3DSA:1.10.8.60 360 443 1.4E-7 T 11-10-2018 AYJ52_19745 077e24a7ecb97aee9a6ac6932e60c9f4 139 Pfam PF14567 SMI1-KNR4 cell-wall 6 135 3.2E-32 T 11-10-2018 AYJ52_19745 077e24a7ecb97aee9a6ac6932e60c9f4 139 Gene3D G3DSA:3.40.1580.10 5 138 1.2E-36 T 11-10-2018 IPR037883 Knr4/Smi1-like domain superfamily AYJ52_19745 077e24a7ecb97aee9a6ac6932e60c9f4 139 SMART SM00860 26 133 1.1E-4 T 11-10-2018 IPR018958 Knr4/Smi1-like domain AYJ52_19745 077e24a7ecb97aee9a6ac6932e60c9f4 139 SUPERFAMILY SSF160631 6 137 3.27E-35 T 11-10-2018 AYJ52_08585 beb86a526b48e33448f963b9c0c3aa37 506 SUPERFAMILY SSF109604 313 502 4.49E-47 T 11-10-2018 AYJ52_08585 beb86a526b48e33448f963b9c0c3aa37 506 SUPERFAMILY SSF53067 135 310 7.69E-47 T 11-10-2018 AYJ52_08585 beb86a526b48e33448f963b9c0c3aa37 506 Gene3D G3DSA:3.30.420.150 115 295 1.6E-89 T 11-10-2018 AYJ52_08585 beb86a526b48e33448f963b9c0c3aa37 506 Pfam PF02541 Ppx/GppA phosphatase family 25 308 8.6E-82 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AYJ52_08585 beb86a526b48e33448f963b9c0c3aa37 506 Pfam PF01966 HD domain 336 416 3.0E-5 T 11-10-2018 IPR006674 HD domain AYJ52_08585 beb86a526b48e33448f963b9c0c3aa37 506 Gene3D G3DSA:1.10.3210.10 310 505 7.5E-59 T 11-10-2018 AYJ52_08585 beb86a526b48e33448f963b9c0c3aa37 506 Gene3D G3DSA:3.30.420.40 12 303 1.6E-89 T 11-10-2018 AYJ52_08585 beb86a526b48e33448f963b9c0c3aa37 506 PIRSF PIRSF001267 1 502 2.1E-198 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AYJ52_08585 beb86a526b48e33448f963b9c0c3aa37 506 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 11 306 9.2E-97 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AYJ52_08585 beb86a526b48e33448f963b9c0c3aa37 506 SUPERFAMILY SSF53067 11 131 7.69E-35 T 11-10-2018 AYJ52_18835 540a63ca15cdbb7cb3915b90fb4e58b2 144 Pfam PF01609 Transposase DDE domain 31 74 4.9E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AYJ52_18835 540a63ca15cdbb7cb3915b90fb4e58b2 144 SUPERFAMILY SSF53098 29 110 5.84E-12 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_18925 540a63ca15cdbb7cb3915b90fb4e58b2 144 Pfam PF01609 Transposase DDE domain 31 74 4.9E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AYJ52_18925 540a63ca15cdbb7cb3915b90fb4e58b2 144 SUPERFAMILY SSF53098 29 110 5.84E-12 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_10560 658d4df76ee131a0e7188f4e402b0dd7 369 Gene3D G3DSA:2.40.128.270 148 261 2.2E-11 T 11-10-2018 IPR038670 HslJ-like superfamily AYJ52_10560 658d4df76ee131a0e7188f4e402b0dd7 369 Gene3D G3DSA:2.40.128.270 29 147 2.8E-12 T 11-10-2018 IPR038670 HslJ-like superfamily AYJ52_10560 658d4df76ee131a0e7188f4e402b0dd7 369 Pfam PF03724 META domain 161 254 2.5E-14 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AYJ52_10560 658d4df76ee131a0e7188f4e402b0dd7 369 Pfam PF03724 META domain 44 138 1.3E-16 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AYJ52_10560 658d4df76ee131a0e7188f4e402b0dd7 369 Pfam PF14302 Domain of unknown function (DUF4377) 277 361 1.7E-22 T 11-10-2018 IPR025485 Domain of unknown function DUF4377 AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 Gene3D G3DSA:1.10.10.10 4 52 1.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 SUPERFAMILY SSF54909 65 147 2.82E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 SMART SM00344 3 112 1.0E-39 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 9.0E-19 T 11-10-2018 AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 SUPERFAMILY SSF46785 3 62 2.88E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 7.9E-15 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ52_15605 da0474fd479790dbfdb0e818b97256e0 149 Gene3D G3DSA:3.30.70.920 53 147 5.5E-20 T 11-10-2018 AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 180 241 1.9E-13 T 11-10-2018 IPR016148 Pili assembly chaperone, C-terminal AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 PRINTS PR00969 Pili chaperone signature 27 36 1.0E-33 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 PRINTS PR00969 Pili chaperone signature 76 97 1.0E-33 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 PRINTS PR00969 Pili chaperone signature 140 155 1.0E-33 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 PRINTS PR00969 Pili chaperone signature 106 123 1.0E-33 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 PRINTS PR00969 Pili chaperone signature 175 190 1.0E-33 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 158 2.3E-42 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 Gene3D G3DSA:2.60.40.10 28 159 9.3E-41 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 SUPERFAMILY SSF49354 23 158 1.05E-39 T 11-10-2018 IPR008962 PapD-like superfamily AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 SUPERFAMILY SSF49584 160 245 3.53E-19 T 11-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AYJ52_13175 e8bf284288b06283f13d0232c9085162 247 Gene3D G3DSA:2.60.40.10 160 246 1.4E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_03685 c260089b4a65c4373f369ed79172a4a8 201 Gene3D G3DSA:3.30.420.10 33 186 2.2E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_03685 c260089b4a65c4373f369ed79172a4a8 201 Pfam PF00665 Integrase core domain 38 153 2.9E-26 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_03685 c260089b4a65c4373f369ed79172a4a8 201 SUPERFAMILY SSF53098 33 192 1.67E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_10815 c260089b4a65c4373f369ed79172a4a8 201 Gene3D G3DSA:3.30.420.10 33 186 2.2E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_10815 c260089b4a65c4373f369ed79172a4a8 201 Pfam PF00665 Integrase core domain 38 153 2.9E-26 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_10815 c260089b4a65c4373f369ed79172a4a8 201 SUPERFAMILY SSF53098 33 192 1.67E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_11895 c260089b4a65c4373f369ed79172a4a8 201 Gene3D G3DSA:3.30.420.10 33 186 2.2E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_11895 c260089b4a65c4373f369ed79172a4a8 201 Pfam PF00665 Integrase core domain 38 153 2.9E-26 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_11895 c260089b4a65c4373f369ed79172a4a8 201 SUPERFAMILY SSF53098 33 192 1.67E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_02110 2a7d94d913eb120209a5335ed2081462 145 Gene3D G3DSA:3.40.30.10 38 143 2.1E-30 T 11-10-2018 AYJ52_02110 2a7d94d913eb120209a5335ed2081462 145 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AYJ52_02110 2a7d94d913eb120209a5335ed2081462 145 SUPERFAMILY SSF52833 22 140 3.35E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_02110 2a7d94d913eb120209a5335ed2081462 145 Pfam PF00085 Thioredoxin 38 137 8.3E-28 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AYJ52_02110 2a7d94d913eb120209a5335ed2081462 145 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 138 1.6E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AYJ52_02110 2a7d94d913eb120209a5335ed2081462 145 Gene3D G3DSA:2.20.28.140 1 33 3.6E-13 T 11-10-2018 AYJ52_02110 2a7d94d913eb120209a5335ed2081462 145 PRINTS PR00421 Thioredoxin family signature 64 73 1.6E-6 T 11-10-2018 AYJ52_02110 2a7d94d913eb120209a5335ed2081462 145 PRINTS PR00421 Thioredoxin family signature 56 64 1.6E-6 T 11-10-2018 AYJ52_02110 2a7d94d913eb120209a5335ed2081462 145 PRINTS PR00421 Thioredoxin family signature 103 114 1.6E-6 T 11-10-2018 AYJ52_02110 2a7d94d913eb120209a5335ed2081462 145 PIRSF PIRSF000077 35 139 1.1E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 905 921 0.0018 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1094 1109 0.041 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1075 1091 0.41 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1063 1073 49.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 924 939 0.3 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1089 1107 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 SUPERFAMILY SSF51120 978 1150 1.19E-17 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 PRINTS PR00313 NodO calcium binding signature 902 913 5.0E-9 T 11-10-2018 AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 PRINTS PR00313 NodO calcium binding signature 1084 1092 5.0E-9 T 11-10-2018 AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 PRINTS PR00313 NodO calcium binding signature 1102 1111 5.0E-9 T 11-10-2018 AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 PRINTS PR00313 NodO calcium binding signature 914 922 5.0E-9 T 11-10-2018 AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Gene3D G3DSA:2.150.10.10 1064 1206 3.1E-15 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Gene3D G3DSA:2.60.40.10 345 425 1.2E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Gene3D G3DSA:2.60.40.10 728 807 8.9E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Gene3D G3DSA:2.60.40.10 9 89 8.7E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Gene3D G3DSA:2.60.40.10 93 172 6.7E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Gene3D G3DSA:2.60.40.10 429 509 1.0E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Gene3D G3DSA:2.60.40.10 261 341 6.1E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Gene3D G3DSA:2.60.40.10 177 257 2.8E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 Gene3D G3DSA:2.150.10.10 898 1044 2.9E-15 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1264 1335 2.1E-7 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AYJ52_03730 e8b9eb99ebdcab4684ad3d59a8c93359 1341 SUPERFAMILY SSF51120 828 1015 4.06E-14 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AYJ52_07810 98a97a9d9333b61db18057fbcd752c33 209 SUPERFAMILY SSF89392 30 194 1.22E-16 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AYJ52_07810 98a97a9d9333b61db18057fbcd752c33 209 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 194 3.6E-13 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AYJ52_07810 98a97a9d9333b61db18057fbcd752c33 209 Gene3D G3DSA:2.50.20.10 27 205 1.2E-22 T 11-10-2018 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 471 1.8E-177 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 SMART SM00840 349 411 9.0E-21 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 Pfam PF09190 DALR domain 349 411 7.2E-20 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 Gene3D G3DSA:3.40.50.620 1 309 2.4E-135 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 317 7.7E-133 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 Gene3D G3DSA:1.20.120.640 311 472 7.4E-42 T 11-10-2018 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 SUPERFAMILY SSF47323 330 471 7.72E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 SUPERFAMILY SSF52374 6 316 1.36E-97 T 11-10-2018 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 472 38.403 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 8.7E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 8.7E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 8.7E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AYJ52_11645 bf1ed3eccb930824dc17d152ff29badc 473 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 8.7E-31 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 Gene3D G3DSA:3.30.300.10 6 234 5.1E-175 T 11-10-2018 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 SUPERFAMILY SSF55973 111 233 5.89E-51 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 5.9E-45 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 Gene3D G3DSA:3.30.300.10 103 378 5.1E-175 T 11-10-2018 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 PIRSF PIRSF000497 1 387 4.8E-172 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 102 7.7E-42 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 Gene3D G3DSA:3.30.300.10 12 271 5.1E-175 T 11-10-2018 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 SUPERFAMILY SSF55973 234 387 1.92E-69 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.842 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 385 1.0E-188 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 SUPERFAMILY SSF55973 6 110 9.42E-46 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13255 223c8a96b02c3dbcc1af68bcee75ed89 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 375 2.5E-67 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 SUPERFAMILY SSF53748 2 392 7.07E-138 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 Gene3D G3DSA:3.40.50.1260 10 389 1.3E-160 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 PIRSF PIRSF000724 1 395 1.2E-127 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 Gene3D G3DSA:3.40.50.1260 165 383 1.3E-160 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 Pfam PF00162 Phosphoglycerate kinase 6 383 1.3E-138 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 6.9E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 6.9E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 6.9E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 6.9E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 6.9E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 6.9E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 6.9E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 6.9E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 6.9E-80 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_13380 5aa831308c7f84484ceedffd4caac307 395 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 38.155 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 Gene3D G3DSA:3.50.50.60 111 249 5.5E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 287 6.7E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 1.2E-14 T 11-10-2018 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 1.2E-14 T 11-10-2018 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.2E-14 T 11-10-2018 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 1.2E-14 T 11-10-2018 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 5.3E-23 T 11-10-2018 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 5.3E-23 T 11-10-2018 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 5.3E-23 T 11-10-2018 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 5.3E-23 T 11-10-2018 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.3E-23 T 11-10-2018 AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 Gene3D G3DSA:3.50.50.60 5 285 5.5E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 SUPERFAMILY SSF51905 2 310 2.59E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10400 7537e1cdac286f147587d9236754fa06 393 Gene3D G3DSA:3.30.390.120 321 384 1.7E-13 T 11-10-2018 AYJ52_07650 cb4987ec5a7fcbe7812858ec0255afd6 617 SUPERFAMILY SSF143975 5 421 7.06E-149 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_07650 cb4987ec5a7fcbe7812858ec0255afd6 617 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 4 606 58.275 T 11-10-2018 AYJ52_07650 cb4987ec5a7fcbe7812858ec0255afd6 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 157 167 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_07650 cb4987ec5a7fcbe7812858ec0255afd6 617 Gene3D G3DSA:3.50.30.80 422 572 3.8E-48 T 11-10-2018 AYJ52_07650 cb4987ec5a7fcbe7812858ec0255afd6 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 508 519 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_07650 cb4987ec5a7fcbe7812858ec0255afd6 617 SUPERFAMILY SSF52016 422 605 4.0E-53 T 11-10-2018 AYJ52_07650 cb4987ec5a7fcbe7812858ec0255afd6 617 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 6 605 1.8E-299 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AYJ52_07650 cb4987ec5a7fcbe7812858ec0255afd6 617 Pfam PF00920 Dehydratase family 69 602 3.3E-163 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_01265 45fe5f3c6c56d2508a76b35229359035 285 PIRSF PIRSF038471 3 285 1.3E-63 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AYJ52_01265 45fe5f3c6c56d2508a76b35229359035 285 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 6 275 2.2E-48 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AYJ52_01265 45fe5f3c6c56d2508a76b35229359035 285 Gene3D G3DSA:2.40.10.340 123 270 8.2E-37 T 11-10-2018 AYJ52_01265 45fe5f3c6c56d2508a76b35229359035 285 Pfam PF04085 rod shape-determining protein MreC 125 271 6.6E-38 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AYJ52_01265 45fe5f3c6c56d2508a76b35229359035 285 Gene3D G3DSA:2.40.10.350 182 259 8.2E-37 T 11-10-2018 AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 SMART SM00382 142 285 9.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 SUPERFAMILY SSF46689 377 423 5.38E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 Gene3D G3DSA:3.40.50.300 112 292 1.0E-60 T 11-10-2018 AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 Gene3D G3DSA:1.10.10.60 376 423 6.9E-6 T 11-10-2018 AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 Pfam PF02954 Bacterial regulatory protein, Fis family 390 418 1.5E-4 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 SUPERFAMILY SSF52540 126 366 4.26E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 146 159 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 Gene3D G3DSA:1.10.8.60 293 372 7.1E-22 T 11-10-2018 AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 208 223 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 Pfam PF00158 Sigma-54 interaction domain 126 288 4.9E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AYJ52_14040 2934627e5b2ca21431cc4691654d197c 423 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 335 344 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AYJ52_00735 b347da8d719daa958d90e5916979b136 477 SUPERFAMILY SSF55424 348 471 1.65E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 Gene3D G3DSA:3.50.50.60 5 340 2.3E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_00735 b347da8d719daa958d90e5916979b136 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 333 3.9E-69 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.3E-69 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 2.3E-69 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.3E-69 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 2.3E-69 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 2.3E-69 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 2.3E-69 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 2.3E-69 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 2.3E-69 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.3E-69 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 45 55 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PIRSF PIRSF000350 1 469 1.9E-84 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 470 1.5E-157 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.7E-34 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 1.7E-34 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.7E-34 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.7E-34 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 1.7E-34 T 11-10-2018 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 SUPERFAMILY SSF51905 1 343 6.63E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_00735 b347da8d719daa958d90e5916979b136 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 461 6.2E-34 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 Gene3D G3DSA:3.30.390.30 352 477 1.6E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_00735 b347da8d719daa958d90e5916979b136 477 Gene3D G3DSA:3.50.50.60 162 283 2.3E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15795 34b3ae4ec2ff5f21c4dff14e0371160d 335 Gene3D G3DSA:3.90.25.10 193 328 5.4E-91 T 11-10-2018 AYJ52_15795 34b3ae4ec2ff5f21c4dff14e0371160d 335 SUPERFAMILY SSF51735 2 332 2.73E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_15795 34b3ae4ec2ff5f21c4dff14e0371160d 335 Gene3D G3DSA:3.40.50.720 2 273 5.4E-91 T 11-10-2018 AYJ52_15795 34b3ae4ec2ff5f21c4dff14e0371160d 335 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 1 333 2.9E-79 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AYJ52_15795 34b3ae4ec2ff5f21c4dff14e0371160d 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 260 2.1E-40 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AYJ52_13360 6311e25490f1860d008400008e65b208 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 5.8E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_13360 6311e25490f1860d008400008e65b208 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_13360 6311e25490f1860d008400008e65b208 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_13360 6311e25490f1860d008400008e65b208 187 SUPERFAMILY SSF46689 3 71 7.18E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_13360 6311e25490f1860d008400008e65b208 187 SUPERFAMILY SSF48498 76 167 8.4E-8 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_13360 6311e25490f1860d008400008e65b208 187 Gene3D G3DSA:1.10.357.10 1 185 2.1E-39 T 11-10-2018 AYJ52_02400 2338b6893d3f4daa381ff368642b3a01 328 Gene3D G3DSA:3.90.110.10 157 328 3.9E-61 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AYJ52_02400 2338b6893d3f4daa381ff368642b3a01 328 Gene3D G3DSA:3.40.50.720 1 156 7.8E-58 T 11-10-2018 AYJ52_02400 2338b6893d3f4daa381ff368642b3a01 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 2 321 4.6E-145 T 11-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AYJ52_02400 2338b6893d3f4daa381ff368642b3a01 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 4.5E-36 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_02400 2338b6893d3f4daa381ff368642b3a01 328 PIRSF PIRSF000102 1 326 2.1E-63 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AYJ52_02400 2338b6893d3f4daa381ff368642b3a01 328 SUPERFAMILY SSF51735 3 157 8.1E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_02400 2338b6893d3f4daa381ff368642b3a01 328 SUPERFAMILY SSF56327 159 327 1.25E-58 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AYJ52_02400 2338b6893d3f4daa381ff368642b3a01 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 56.501 T 11-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AYJ52_02400 2338b6893d3f4daa381ff368642b3a01 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 322 2.6E-32 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AYJ52_00810 d52fdd42fa3eccf164c9f19d6ce5ef77 95 Pfam PF04359 Protein of unknown function (DUF493) 13 94 3.7E-24 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 AYJ52_00810 d52fdd42fa3eccf164c9f19d6ce5ef77 95 Gene3D G3DSA:3.30.70.260 8 95 1.2E-22 T 11-10-2018 AYJ52_00810 d52fdd42fa3eccf164c9f19d6ce5ef77 95 SUPERFAMILY SSF117991 9 95 9.94E-21 T 11-10-2018 IPR027471 YbeD-like domain superfamily AYJ52_00810 d52fdd42fa3eccf164c9f19d6ce5ef77 95 ProDom PD061650 JHP0447 HP0495 CJ0253 16 87 9.0E-5 T 11-10-2018 AYJ52_17660 f778bdcd1c063ba03e5a629acf2248d4 412 SUPERFAMILY SSF81301 1 119 5.89E-32 T 11-10-2018 AYJ52_17660 f778bdcd1c063ba03e5a629acf2248d4 412 Hamap MF_01262 CCA-adding enzyme [cca]. 1 400 40.712 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AYJ52_17660 f778bdcd1c063ba03e5a629acf2248d4 412 SUPERFAMILY SSF81891 121 361 5.76E-55 T 11-10-2018 AYJ52_17660 f778bdcd1c063ba03e5a629acf2248d4 412 Pfam PF01743 Poly A polymerase head domain 3 122 5.1E-20 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AYJ52_17660 f778bdcd1c063ba03e5a629acf2248d4 412 Pfam PF01966 HD domain 230 310 2.0E-4 T 11-10-2018 IPR006674 HD domain AYJ52_17660 f778bdcd1c063ba03e5a629acf2248d4 412 Gene3D G3DSA:1.10.3090.10 122 411 1.2E-44 T 11-10-2018 AYJ52_17660 f778bdcd1c063ba03e5a629acf2248d4 412 Gene3D G3DSA:3.30.460.10 1 121 1.4E-30 T 11-10-2018 AYJ52_17660 f778bdcd1c063ba03e5a629acf2248d4 412 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.602 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AYJ52_17660 f778bdcd1c063ba03e5a629acf2248d4 412 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 5.5E-17 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AYJ52_17660 f778bdcd1c063ba03e5a629acf2248d4 412 PIRSF PIRSF000813 1 407 2.0E-189 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 Gene3D G3DSA:2.102.10.10 45 168 1.1E-111 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 192 424 7.1E-18 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 60 75 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 144 170 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 81 101 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 30 55 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 185 207 1.0E-36 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 Gene3D G3DSA:3.90.380.10 22 423 1.1E-111 T 11-10-2018 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 SUPERFAMILY SSF55961 163 425 9.42E-52 T 11-10-2018 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 SUPERFAMILY SSF50022 13 159 1.44E-48 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_15065 3d19418d4983dc25106d4005a240541d 425 Pfam PF00355 Rieske [2Fe-2S] domain 45 129 9.0E-22 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AYJ52_17275 786daedec22e0527b442de8b76d20fd5 206 Gene3D G3DSA:1.10.3210.10 20 180 6.1E-7 T 11-10-2018 AYJ52_17275 786daedec22e0527b442de8b76d20fd5 206 SUPERFAMILY SSF109604 22 204 3.68E-23 T 11-10-2018 AYJ52_17275 786daedec22e0527b442de8b76d20fd5 206 PIRSF PIRSF035170 9 206 4.0E-46 T 11-10-2018 IPR009218 Predicted HD phosphohydrolase AYJ52_00900 613747964560e3b22df326d38aa79cce 325 Pfam PF00348 Polyprenyl synthetase 36 264 4.2E-72 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AYJ52_00900 613747964560e3b22df326d38aa79cce 325 Gene3D G3DSA:1.10.600.10 1 325 9.2E-109 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AYJ52_00900 613747964560e3b22df326d38aa79cce 325 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 206 218 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AYJ52_00900 613747964560e3b22df326d38aa79cce 325 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AYJ52_00900 613747964560e3b22df326d38aa79cce 325 SUPERFAMILY SSF48576 6 323 2.4E-95 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AYJ52_02780 c19640f1f7b86eb0106945ebc1bce7e5 337 Pfam PF01544 CorA-like Mg2+ transporter protein 27 332 7.7E-54 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AYJ52_02780 c19640f1f7b86eb0106945ebc1bce7e5 337 SUPERFAMILY SSF143865 2 274 1.05E-35 T 11-10-2018 AYJ52_02780 c19640f1f7b86eb0106945ebc1bce7e5 337 Gene3D G3DSA:1.20.58.340 261 337 2.2E-15 T 11-10-2018 AYJ52_02780 c19640f1f7b86eb0106945ebc1bce7e5 337 SUPERFAMILY SSF144083 272 335 4.97E-14 T 11-10-2018 AYJ52_17300 8578fd50374f6df270abbcc0e0dd13f2 422 Gene3D G3DSA:3.90.1860.10 12 422 2.2E-121 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AYJ52_17300 8578fd50374f6df270abbcc0e0dd13f2 422 Pfam PF01139 tRNA-splicing ligase RtcB 49 422 1.5E-135 T 11-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AYJ52_17300 8578fd50374f6df270abbcc0e0dd13f2 422 SUPERFAMILY SSF103365 25 422 5.23E-142 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AYJ52_00205 427473ee20f2df4836b462d39880cda9 497 Pfam PF01235 Sodium:alanine symporter family 53 472 2.7E-138 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_00205 427473ee20f2df4836b462d39880cda9 497 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 462 7.2E-128 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_00205 427473ee20f2df4836b462d39880cda9 497 PRINTS PR00175 Sodium/alanine symporter signature 428 448 6.9E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_00205 427473ee20f2df4836b462d39880cda9 497 PRINTS PR00175 Sodium/alanine symporter signature 88 110 6.9E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_00205 427473ee20f2df4836b462d39880cda9 497 PRINTS PR00175 Sodium/alanine symporter signature 365 387 6.9E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_00205 427473ee20f2df4836b462d39880cda9 497 PRINTS PR00175 Sodium/alanine symporter signature 303 321 6.9E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_00205 427473ee20f2df4836b462d39880cda9 497 PRINTS PR00175 Sodium/alanine symporter signature 216 235 6.9E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_00205 427473ee20f2df4836b462d39880cda9 497 PRINTS PR00175 Sodium/alanine symporter signature 188 206 6.9E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_00205 427473ee20f2df4836b462d39880cda9 497 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 88 103 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_14250 9e40fd004d92dd368ad16cdf27c57238 261 SUPERFAMILY SSF53850 30 253 2.52E-68 T 11-10-2018 AYJ52_14250 9e40fd004d92dd368ad16cdf27c57238 261 Gene3D G3DSA:3.40.190.10 33 253 1.5E-78 T 11-10-2018 AYJ52_14250 9e40fd004d92dd368ad16cdf27c57238 261 Gene3D G3DSA:3.40.190.10 110 219 1.5E-78 T 11-10-2018 AYJ52_14250 9e40fd004d92dd368ad16cdf27c57238 261 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 37 252 1.9E-62 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AYJ52_14250 9e40fd004d92dd368ad16cdf27c57238 261 Pfam PF13531 Bacterial extracellular solute-binding protein 32 253 2.3E-45 T 11-10-2018 AYJ52_14250 9e40fd004d92dd368ad16cdf27c57238 261 PIRSF PIRSF004846 3 257 7.6E-73 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AYJ52_07345 2b25fd5fce2f37994abd6f66958adfa7 265 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 239 6.9E-64 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_07345 2b25fd5fce2f37994abd6f66958adfa7 265 Pfam PF01416 tRNA pseudouridine synthase 144 246 8.0E-28 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_07345 2b25fd5fce2f37994abd6f66958adfa7 265 Gene3D G3DSA:3.30.70.660 107 243 1.0E-47 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 AYJ52_07345 2b25fd5fce2f37994abd6f66958adfa7 265 PIRSF PIRSF001430 1 254 1.3E-76 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_07345 2b25fd5fce2f37994abd6f66958adfa7 265 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 33.894 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_07345 2b25fd5fce2f37994abd6f66958adfa7 265 Gene3D G3DSA:3.30.70.580 1 106 2.6E-34 T 11-10-2018 AYJ52_07345 2b25fd5fce2f37994abd6f66958adfa7 265 SUPERFAMILY SSF55120 1 259 4.6E-86 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_10945 36f39a668d6d1580754afa28a342c9c2 444 SMART SM00922 183 283 5.6E-15 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AYJ52_10945 36f39a668d6d1580754afa28a342c9c2 444 Gene3D G3DSA:3.20.20.120 137 398 1.0E-176 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AYJ52_10945 36f39a668d6d1580754afa28a342c9c2 444 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 4 444 5.9E-263 T 11-10-2018 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 AYJ52_10945 36f39a668d6d1580754afa28a342c9c2 444 SUPERFAMILY SSF54826 5 135 1.98E-28 T 11-10-2018 AYJ52_10945 36f39a668d6d1580754afa28a342c9c2 444 Pfam PF13378 Enolase C-terminal domain-like 187 403 3.2E-35 T 11-10-2018 IPR029065 Enolase C-terminal domain-like AYJ52_10945 36f39a668d6d1580754afa28a342c9c2 444 Gene3D G3DSA:3.30.390.10 9 412 1.0E-176 T 11-10-2018 IPR029017 Enolase-like, N-terminal AYJ52_10945 36f39a668d6d1580754afa28a342c9c2 444 SUPERFAMILY SSF51604 137 413 9.37E-77 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 Gene3D G3DSA:1.20.200.10 144 411 1.4E-103 T 11-10-2018 AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 2.1E-28 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 2.1E-28 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 2.1E-28 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 2.1E-28 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 Pfam PF10415 Fumarase C C-terminus 413 465 6.2E-16 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 Pfam PF00206 Lyase 19 346 2.8E-92 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 Gene3D G3DSA:1.10.275.10 5 143 6.9E-54 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 Gene3D G3DSA:1.10.40.30 413 462 2.4E-16 T 11-10-2018 AYJ52_14100 711267c5f219a3efad7e611a2976cea9 471 SUPERFAMILY SSF48557 7 465 4.24E-131 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AYJ52_07665 00ff8dc480e58eec999c9928339008e6 170 SUPERFAMILY SSF52540 2 161 1.49E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07665 00ff8dc480e58eec999c9928339008e6 170 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 4 159 2.2E-56 T 11-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AYJ52_07665 00ff8dc480e58eec999c9928339008e6 170 Pfam PF01202 Shikimate kinase 10 161 1.5E-15 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AYJ52_07665 00ff8dc480e58eec999c9928339008e6 170 Gene3D G3DSA:3.40.50.300 1 163 1.5E-62 T 11-10-2018 AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 Gene3D G3DSA:3.40.50.300 9 235 2.2E-75 T 11-10-2018 AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 Gene3D G3DSA:1.20.120.1080 447 550 4.8E-18 T 11-10-2018 AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 16 1280 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 SMART SM00382 75 384 1.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 SMART SM00487 58 242 3.2E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 SUPERFAMILY SSF52540 60 563 2.53E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 Gene3D G3DSA:3.40.50.300 236 420 1.2E-50 T 11-10-2018 AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 SMART SM00490 303 404 6.1E-14 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 Pfam PF00271 Helicase conserved C-terminal domain 288 403 2.6E-11 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 Pfam PF11898 Domain of unknown function (DUF3418) 709 1280 3.8E-147 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 619 694 6.0E-15 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 Pfam PF00270 DEAD/DEAH box helicase 67 216 2.6E-7 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 SMART SM00847 464 555 8.6E-34 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AYJ52_11315 46a023557c91eab520387c08a9c2fbea 1285 Pfam PF04408 Helicase associated domain (HA2) 466 550 2.6E-16 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AYJ52_16360 f2428cbd13566f8cdc306ae554fc28ee 322 SUPERFAMILY SSF53474 21 320 3.65E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_16360 f2428cbd13566f8cdc306ae554fc28ee 322 Gene3D G3DSA:3.40.50.1820 20 322 3.1E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_16360 f2428cbd13566f8cdc306ae554fc28ee 322 Pfam PF12146 Serine aminopeptidase, S33 46 298 3.6E-19 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AYJ52_09530 1937244af08a7eb25e2600275338c250 316 Gene3D G3DSA:3.40.50.2020 7 302 3.0E-131 T 11-10-2018 AYJ52_09530 1937244af08a7eb25e2600275338c250 316 SUPERFAMILY SSF53271 69 306 2.62E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AYJ52_09530 1937244af08a7eb25e2600275338c250 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 8.5E-50 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AYJ52_09530 1937244af08a7eb25e2600275338c250 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 197 313 1.8E-28 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AYJ52_09530 1937244af08a7eb25e2600275338c250 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 314 4.6E-121 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AYJ52_09530 1937244af08a7eb25e2600275338c250 316 SMART SM01400 4 121 6.1E-79 T 11-10-2018 AYJ52_09530 1937244af08a7eb25e2600275338c250 316 Gene3D G3DSA:3.40.50.2020 148 290 3.0E-131 T 11-10-2018 AYJ52_09530 1937244af08a7eb25e2600275338c250 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 48.447 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AYJ52_09530 1937244af08a7eb25e2600275338c250 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AYJ52_15905 18530e11570aa68dbe1c686da2e2c98d 337 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 25 328 7.8E-63 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AYJ52_15905 18530e11570aa68dbe1c686da2e2c98d 337 Gene3D G3DSA:3.40.50.720 138 310 6.3E-121 T 11-10-2018 AYJ52_15905 18530e11570aa68dbe1c686da2e2c98d 337 PIRSF PIRSF001439 1 337 2.4E-91 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AYJ52_15905 18530e11570aa68dbe1c686da2e2c98d 337 TIGRFAM TIGR03944 dehyd_SbnB_fam: 2,3-diaminopropionate biosynthesis protein SbnB 7 336 2.4E-121 T 11-10-2018 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB AYJ52_15905 18530e11570aa68dbe1c686da2e2c98d 337 Gene3D G3DSA:3.30.1780.10 10 332 6.3E-121 T 11-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AYJ52_15905 18530e11570aa68dbe1c686da2e2c98d 337 SUPERFAMILY SSF51735 7 336 2.03E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_16800 9beb2be0ff7814b76031033622824e1f 89 PIRSF PIRSF002097 1 87 6.0E-35 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AYJ52_16800 9beb2be0ff7814b76031033622824e1f 89 Pfam PF02954 Bacterial regulatory protein, Fis family 44 83 3.2E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_16800 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 50 67 1.3E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_16800 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 67 87 1.3E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_16800 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 46 58 2.0E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AYJ52_16800 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 31 46 2.0E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AYJ52_16800 9beb2be0ff7814b76031033622824e1f 89 PRINTS PR01591 DNA-binding protein FIS signature 15 31 2.0E-9 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AYJ52_16800 9beb2be0ff7814b76031033622824e1f 89 Gene3D G3DSA:1.10.10.60 2 86 7.0E-27 T 11-10-2018 AYJ52_16800 9beb2be0ff7814b76031033622824e1f 89 SUPERFAMILY SSF46689 15 86 6.27E-22 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_04855 c8ffa52346af2f0b5f2527d6507879b5 375 Gene3D G3DSA:3.30.420.40 140 335 5.7E-125 T 11-10-2018 AYJ52_04855 c8ffa52346af2f0b5f2527d6507879b5 375 Gene3D G3DSA:3.30.420.40 11 370 5.7E-125 T 11-10-2018 AYJ52_04855 c8ffa52346af2f0b5f2527d6507879b5 375 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 4 373 9.5E-134 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AYJ52_04855 c8ffa52346af2f0b5f2527d6507879b5 375 SUPERFAMILY SSF53067 4 347 8.06E-24 T 11-10-2018 AYJ52_04855 c8ffa52346af2f0b5f2527d6507879b5 375 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 3 375 40.23 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AYJ52_17050 686d05355bf782e319fc77ef20dce3d1 832 Gene3D G3DSA:2.60.40.3110 269 357 1.5E-8 T 11-10-2018 AYJ52_17050 686d05355bf782e319fc77ef20dce3d1 832 Gene3D G3DSA:2.60.40.2070 747 829 2.5E-9 T 11-10-2018 AYJ52_17050 686d05355bf782e319fc77ef20dce3d1 832 Pfam PF00577 Outer membrane usher protein 241 740 1.2E-33 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AYJ52_17050 686d05355bf782e319fc77ef20dce3d1 832 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 310 320 - T 11-10-2018 IPR018030 Fimbrial membrane usher, conserved site AYJ52_17050 686d05355bf782e319fc77ef20dce3d1 832 Gene3D G3DSA:2.60.40.2610 653 744 1.2E-11 T 11-10-2018 AYJ52_17050 686d05355bf782e319fc77ef20dce3d1 832 Pfam PF13953 PapC C-terminal domain 752 809 1.7E-13 T 11-10-2018 IPR025949 PapC-like, C-terminal domain AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 Pfam PF00701 Dihydrodipicolinate synthetase family 9 293 1.4E-103 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 293 65.589 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 293 8.9E-113 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 PIRSF PIRSF001365 3 297 1.8E-98 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 Gene3D G3DSA:3.20.20.70 7 297 4.4E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 2.8E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 2.8E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 2.8E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 2.8E-37 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 SMART SM01130 7 295 1.0E-144 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_04630 66b7a7a57237283f697be9cf4f12bfa3 297 SUPERFAMILY SSF51569 8 295 5.13E-107 T 11-10-2018 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 354 1.2E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 SMART SM00388 140 204 6.5E-5 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 SUPERFAMILY SSF55874 193 354 4.19E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 SUPERFAMILY SSF158472 86 135 1.26E-6 T 11-10-2018 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 SMART SM00304 85 139 7.6E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 Gene3D G3DSA:1.10.287.130 141 205 9.4E-9 T 11-10-2018 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 Gene3D G3DSA:3.30.565.10 206 357 1.1E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 203 1.7E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 Gene3D G3DSA:1.20.1480.50 59 140 2.3E-9 T 11-10-2018 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 Pfam PF00672 HAMP domain 86 135 2.6E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 SMART SM00387 248 357 1.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 SUPERFAMILY SSF47384 123 205 5.69E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 5.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 312 5.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_19565 5a202ae81a36a19f3780a5ef4805f63a 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 337 5.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_12370 ffc0a8792fe995a3dd2adfb43532decc 437 SUPERFAMILY SSF103473 16 428 6.54E-81 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_12370 ffc0a8792fe995a3dd2adfb43532decc 437 Gene3D G3DSA:1.20.1250.20 30 429 2.6E-68 T 11-10-2018 AYJ52_12370 ffc0a8792fe995a3dd2adfb43532decc 437 Pfam PF07690 Major Facilitator Superfamily 41 300 1.6E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_12370 ffc0a8792fe995a3dd2adfb43532decc 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 306 323 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_12370 ffc0a8792fe995a3dd2adfb43532decc 437 ProSitePatterns PS00217 Sugar transport proteins signature 2. 348 373 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 Gene3D G3DSA:3.40.50.300 95 383 5.0E-129 T 11-10-2018 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 5.9E-74 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 SUPERFAMILY SSF47917 384 512 6.02E-46 T 11-10-2018 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 SUPERFAMILY SSF50615 11 95 3.4E-27 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 1.2E-13 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 Gene3D G3DSA:1.20.150.20 384 514 3.9E-46 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 SUPERFAMILY SSF52540 97 382 1.06E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 Gene3D G3DSA:2.40.30.20 2 94 6.2E-31 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 2.2E-44 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 512 1.1E-248 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05845 32fd0117e79ab3d009bdda3f8cc631b7 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 49.747 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_08330 10d53d5c1e9863572ebff15c96eaa8f2 609 Gene3D G3DSA:3.40.50.300 2 195 1.3E-44 T 11-10-2018 AYJ52_08330 10d53d5c1e9863572ebff15c96eaa8f2 609 Pfam PF07670 Nucleoside recognition 447 581 6.7E-24 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AYJ52_08330 10d53d5c1e9863572ebff15c96eaa8f2 609 Pfam PF07670 Nucleoside recognition 281 370 6.9E-13 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AYJ52_08330 10d53d5c1e9863572ebff15c96eaa8f2 609 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 1.8E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_08330 10d53d5c1e9863572ebff15c96eaa8f2 609 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 1.8E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_08330 10d53d5c1e9863572ebff15c96eaa8f2 609 SUPERFAMILY SSF52540 5 168 3.73E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_08330 10d53d5c1e9863572ebff15c96eaa8f2 609 Pfam PF07664 Ferrous iron transport protein B C terminus 390 442 5.7E-14 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AYJ52_08330 10d53d5c1e9863572ebff15c96eaa8f2 609 Pfam PF02421 Ferrous iron transport protein B 5 164 6.2E-56 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Gene3D G3DSA:1.10.730.10 14 807 0.0 T 11-10-2018 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Gene3D G3DSA:3.90.740.10 233 428 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Gene3D G3DSA:3.10.20.590 815 874 2.4E-19 T 11-10-2018 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Pfam PF08264 Anticodon-binding domain of tRNA 718 834 1.7E-13 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 227 417 3.2E-73 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 9 874 22.941 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 SUPERFAMILY SSF52374 10 685 4.8E-144 T 11-10-2018 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 132 149 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 540 562 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 501 519 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 158 174 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 190 203 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 573 583 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 PRINTS PR00985 Leucyl-tRNA synthetase signature 221 240 1.3E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Gene3D G3DSA:3.10.330.110 583 645 0.0 T 11-10-2018 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Gene3D G3DSA:3.40.50.620 38 582 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 SUPERFAMILY SSF50677 232 428 5.34E-52 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 10 874 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 432 588 1.1E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 635 675 5.7E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 Pfam PF09334 tRNA synthetases class I (M) 41 177 3.7E-19 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_07920 20cc961e3ee2ac888940f49e088d68cc 874 SUPERFAMILY SSF47323 679 874 3.18E-26 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_00650 c652f13d272eb1a64875b9445f88810a 131 SUPERFAMILY SSF55298 8 128 1.05E-33 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_00650 c652f13d272eb1a64875b9445f88810a 131 Gene3D G3DSA:3.30.1330.40 1 130 3.6E-40 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_00650 c652f13d272eb1a64875b9445f88810a 131 Pfam PF01042 Endoribonuclease L-PSP 12 126 3.1E-28 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 SUPERFAMILY SSF51971 149 402 1.24E-71 T 11-10-2018 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 Gene3D G3DSA:1.10.1060.10 14 146 1.3E-31 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 PRINTS PR00419 Adrenodoxin reductase family signature 216 226 3.6E-33 T 11-10-2018 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 PRINTS PR00419 Adrenodoxin reductase family signature 151 173 3.6E-33 T 11-10-2018 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 PRINTS PR00419 Adrenodoxin reductase family signature 174 187 3.6E-33 T 11-10-2018 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 3.6E-33 T 11-10-2018 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 3.6E-33 T 11-10-2018 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 28 135 5.9E-36 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 Gene3D G3DSA:3.40.50.720 147 255 5.7E-19 T 11-10-2018 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 SUPERFAMILY SSF46548 10 160 5.23E-37 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 9 473 2.2E-236 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 460 9.3E-28 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_03220 daf26f271725438611886f283b6ac9b4 473 Gene3D G3DSA:3.50.50.60 256 401 7.8E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 SUPERFAMILY SSF51215 13 155 2.75E-13 T 11-10-2018 IPR037923 Transcription regulator HTH-like AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 Pfam PF02311 AraC-like ligand binding domain 18 106 3.7E-11 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 Gene3D G3DSA:1.10.10.60 234 278 4.1E-12 T 11-10-2018 AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 SUPERFAMILY SSF46689 184 224 3.05E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 Gene3D G3DSA:1.10.10.60 176 233 1.1E-15 T 11-10-2018 AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 SMART SM00342 191 273 2.8E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 269 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 Pfam PF12833 Helix-turn-helix domain 197 273 8.2E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 257 3.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 273 3.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_12940 364a3a47f8ef7e241715bc27d4fa0410 278 SUPERFAMILY SSF46689 228 273 4.93E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_15115 6e0f393bef7d3d37216bb023b98f2ed4 373 SUPERFAMILY SSF56112 16 342 1.45E-58 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_15115 6e0f393bef7d3d37216bb023b98f2ed4 373 Gene3D G3DSA:3.30.200.20 15 116 4.7E-27 T 11-10-2018 AYJ52_15115 6e0f393bef7d3d37216bb023b98f2ed4 373 Gene3D G3DSA:3.90.1200.10 122 354 1.9E-62 T 11-10-2018 AYJ52_15115 6e0f393bef7d3d37216bb023b98f2ed4 373 Pfam PF01636 Phosphotransferase enzyme family 38 265 1.7E-40 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AYJ52_05650 0107526a88606779ca646d8a8a63ed10 629 Gene3D G3DSA:3.30.300.30 455 584 6.6E-33 T 11-10-2018 AYJ52_05650 0107526a88606779ca646d8a8a63ed10 629 Pfam PF00501 AMP-binding enzyme 14 461 5.4E-84 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_05650 0107526a88606779ca646d8a8a63ed10 629 Gene3D G3DSA:3.40.50.12780 1 454 1.6E-136 T 11-10-2018 AYJ52_05650 0107526a88606779ca646d8a8a63ed10 629 SUPERFAMILY SSF56801 8 563 5.36E-109 T 11-10-2018 AYJ52_05650 0107526a88606779ca646d8a8a63ed10 629 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_05235 0f75e6e8f51616f0daf5620f3e9cf6ba 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.6E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05235 0f75e6e8f51616f0daf5620f3e9cf6ba 212 SUPERFAMILY SSF46689 2 76 2.13E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_05235 0f75e6e8f51616f0daf5620f3e9cf6ba 212 Gene3D G3DSA:1.10.357.10 53 212 1.1E-37 T 11-10-2018 AYJ52_05235 0f75e6e8f51616f0daf5620f3e9cf6ba 212 Gene3D G3DSA:1.10.10.60 1 52 1.4E-25 T 11-10-2018 AYJ52_03860 d93acda18350e864cd6a4ec4a9823ef9 430 Pfam PF00202 Aminotransferase class-III 26 413 1.5E-122 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_03860 d93acda18350e864cd6a4ec4a9823ef9 430 Gene3D G3DSA:3.90.1150.10 9 411 4.9E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_03860 d93acda18350e864cd6a4ec4a9823ef9 430 SUPERFAMILY SSF53383 26 415 4.57E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_03860 d93acda18350e864cd6a4ec4a9823ef9 430 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 11 415 1.9E-172 T 11-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AYJ52_03860 d93acda18350e864cd6a4ec4a9823ef9 430 Gene3D G3DSA:3.40.640.10 60 319 4.9E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_03860 d93acda18350e864cd6a4ec4a9823ef9 430 PIRSF PIRSF000521 3 131 0.004 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_03860 d93acda18350e864cd6a4ec4a9823ef9 430 PIRSF PIRSF000521 126 418 1.7E-44 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_03860 d93acda18350e864cd6a4ec4a9823ef9 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_10135 2b9c0fd21de99dab56f6cbc6fc47db22 139 Pfam PF13994 PgaD-like protein 6 136 1.3E-27 T 11-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 AYJ52_10135 2b9c0fd21de99dab56f6cbc6fc47db22 139 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 5 139 2.3E-38 T 11-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 AYJ52_05630 9d325b7632d934414e06c545c4d0f6e0 450 SUPERFAMILY SSF103473 17 431 1.83E-63 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_05630 9d325b7632d934414e06c545c4d0f6e0 450 Gene3D G3DSA:1.20.1250.20 19 441 3.3E-59 T 11-10-2018 AYJ52_05630 9d325b7632d934414e06c545c4d0f6e0 450 Pfam PF07690 Major Facilitator Superfamily 62 390 2.1E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_03555 8e808b95cf4366d78c6745d154effd49 316 Gene3D G3DSA:3.30.200.20 1 101 3.0E-19 T 11-10-2018 AYJ52_03555 8e808b95cf4366d78c6745d154effd49 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 94.219 T 11-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AYJ52_03555 8e808b95cf4366d78c6745d154effd49 316 Pfam PF01636 Phosphotransferase enzyme family 26 253 1.4E-22 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AYJ52_03555 8e808b95cf4366d78c6745d154effd49 316 Gene3D G3DSA:3.90.1200.10 104 315 5.0E-54 T 11-10-2018 AYJ52_03555 8e808b95cf4366d78c6745d154effd49 316 SUPERFAMILY SSF56112 5 313 7.29E-54 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_16180 7e53d499d48e4c0e675007d4f0c9e0c9 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_16180 7e53d499d48e4c0e675007d4f0c9e0c9 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_16180 7e53d499d48e4c0e675007d4f0c9e0c9 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_16180 7e53d499d48e4c0e675007d4f0c9e0c9 289 SUPERFAMILY SSF46785 6 114 7.49E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_16180 7e53d499d48e4c0e675007d4f0c9e0c9 289 SUPERFAMILY SSF53850 90 285 1.25E-30 T 11-10-2018 AYJ52_16180 7e53d499d48e4c0e675007d4f0c9e0c9 289 Gene3D G3DSA:3.40.190.10 98 263 1.8E-49 T 11-10-2018 AYJ52_16180 7e53d499d48e4c0e675007d4f0c9e0c9 289 Gene3D G3DSA:3.40.190.10 163 256 1.8E-49 T 11-10-2018 AYJ52_16180 7e53d499d48e4c0e675007d4f0c9e0c9 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.1E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_16180 7e53d499d48e4c0e675007d4f0c9e0c9 289 Pfam PF03466 LysR substrate binding domain 90 283 2.2E-30 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_16180 7e53d499d48e4c0e675007d4f0c9e0c9 289 Gene3D G3DSA:1.10.10.10 5 96 3.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 SUPERFAMILY SSF100920 384 539 1.57E-59 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 9.4E-283 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 641 36.056 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 SUPERFAMILY SSF100934 506 603 3.53E-17 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 Gene3D G3DSA:3.30.420.40 179 365 1.3E-164 T 11-10-2018 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.2E-76 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 SUPERFAMILY SSF53067 186 381 1.69E-66 T 11-10-2018 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 SUPERFAMILY SSF53067 2 182 5.51E-65 T 11-10-2018 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 Gene3D G3DSA:2.60.34.10 382 522 1.5E-64 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 Gene3D G3DSA:3.90.640.10 228 315 1.3E-164 T 11-10-2018 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 Gene3D G3DSA:1.20.1270.10 523 606 2.0E-20 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 Gene3D G3DSA:3.30.420.40 5 378 1.3E-164 T 11-10-2018 AYJ52_05050 46bcdb4205f316333a0ba4ad5aa5c4ac 646 Pfam PF00012 Hsp70 protein 4 603 2.4E-259 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_02005 da36463c4c27f68529d574f514afbb9c 345 Gene3D G3DSA:2.40.10.240 63 159 1.9E-114 T 11-10-2018 AYJ52_02005 da36463c4c27f68529d574f514afbb9c 345 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 44.784 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AYJ52_02005 da36463c4c27f68529d574f514afbb9c 345 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 2.0E-135 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AYJ52_02005 da36463c4c27f68529d574f514afbb9c 345 Gene3D G3DSA:3.40.1780.10 14 340 1.9E-114 T 11-10-2018 AYJ52_02005 da36463c4c27f68529d574f514afbb9c 345 Pfam PF02547 Queuosine biosynthesis protein 3 340 3.2E-125 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AYJ52_02005 da36463c4c27f68529d574f514afbb9c 345 SUPERFAMILY SSF111337 1 340 1.18E-126 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AYJ52_09410 5bfbcb58e6c0cbb187baac07b918a3f6 243 SUPERFAMILY SSF53474 7 238 3.24E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_09410 5bfbcb58e6c0cbb187baac07b918a3f6 243 Gene3D G3DSA:3.40.50.1820 41 238 2.3E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_09410 5bfbcb58e6c0cbb187baac07b918a3f6 243 Pfam PF12697 Alpha/beta hydrolase family 48 230 5.1E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_08510 f93d7c57afdea5c9b5bbec6caca57a51 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 134 195 1.0E-5 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AYJ52_08510 f93d7c57afdea5c9b5bbec6caca57a51 206 Gene3D G3DSA:3.40.30.10 2 203 3.2E-82 T 11-10-2018 AYJ52_08510 f93d7c57afdea5c9b5bbec6caca57a51 206 SUPERFAMILY SSF52833 1 83 3.98E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_08510 f93d7c57afdea5c9b5bbec6caca57a51 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 80 3.6E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_08510 f93d7c57afdea5c9b5bbec6caca57a51 206 Gene3D G3DSA:1.20.1050.10 87 194 3.2E-82 T 11-10-2018 AYJ52_08510 f93d7c57afdea5c9b5bbec6caca57a51 206 SUPERFAMILY SSF47616 77 202 4.73E-34 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 Gene3D G3DSA:3.30.1550.10 2 72 2.2E-36 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 6.6E-66 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 6.0E-32 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 Gene3D G3DSA:1.10.10.250 73 141 6.6E-27 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 SMART SM00649 9 141 7.5E-86 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.168 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.1E-23 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 SUPERFAMILY SSF46906 68 141 3.01E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 141 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 SUPERFAMILY SSF54747 3 73 3.79E-31 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AYJ52_06630 b2d20d5cadba4f687b2b717b9e4e1856 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-15 T 11-10-2018 AYJ52_02550 d84081eced508baf42985c6596e840cf 390 Gene3D G3DSA:1.20.140.10 249 390 3.7E-42 T 11-10-2018 AYJ52_02550 d84081eced508baf42985c6596e840cf 390 Gene3D G3DSA:2.40.110.10 133 248 6.7E-42 T 11-10-2018 AYJ52_02550 d84081eced508baf42985c6596e840cf 390 SUPERFAMILY SSF47203 241 390 1.93E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_02550 d84081eced508baf42985c6596e840cf 390 SUPERFAMILY SSF56645 15 253 2.23E-87 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_02550 d84081eced508baf42985c6596e840cf 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_02550 d84081eced508baf42985c6596e840cf 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 130 1.1E-35 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_02550 d84081eced508baf42985c6596e840cf 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 389 1.3E-40 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_02550 d84081eced508baf42985c6596e840cf 390 Gene3D G3DSA:1.10.540.10 11 132 7.1E-39 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_02550 d84081eced508baf42985c6596e840cf 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 230 2.4E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_03675 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_03675 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_03675 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_03675 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_06140 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_06140 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_06140 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_06140 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_03480 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_03480 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_03480 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_03480 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_00360 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_00360 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_00360 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_00360 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_10900 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_10900 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_10900 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_10900 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_11910 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_11910 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_11910 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_11910 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_03760 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_03760 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_03760 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_03760 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_18020 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_18020 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_18020 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_18020 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_11830 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_11830 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_11830 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_11830 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_11820 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_11820 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_11820 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_11820 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_02285 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_02285 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_02285 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_02285 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_03810 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_03810 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_03810 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_03810 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_00970 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF13276 HTH-like domain 37 86 2.1E-7 T 11-10-2018 IPR025948 HTH-like domain AYJ52_00970 eea02b90a4dded1b90497e24e4f82c33 283 Gene3D G3DSA:3.30.420.10 108 265 7.9E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_00970 eea02b90a4dded1b90497e24e4f82c33 283 Pfam PF00665 Integrase core domain 110 223 7.9E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_00970 eea02b90a4dded1b90497e24e4f82c33 283 SUPERFAMILY SSF53098 104 264 4.68E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 56 287 5.6E-60 T 11-10-2018 AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 182 210 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 134 1.6E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 183 1.6E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 195 214 1.6E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 Gene3D G3DSA:3.40.50.720 1 290 7.6E-85 T 11-10-2018 AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 134 1.5E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 235 1.5E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 185 1.5E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 48 65 1.5E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 214 1.5E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 252 272 1.5E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12525 0b9ecac48364e18b0f8fef00c0e185bc 292 SUPERFAMILY SSF51735 45 290 7.02E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_10940 74bbccd298423798e2de0ed8ddb54997 452 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 31 440 5.9E-140 T 11-10-2018 AYJ52_10940 74bbccd298423798e2de0ed8ddb54997 452 Gene3D G3DSA:1.20.1250.20 246 446 1.3E-32 T 11-10-2018 AYJ52_10940 74bbccd298423798e2de0ed8ddb54997 452 SUPERFAMILY SSF103473 14 446 3.4E-83 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_10940 74bbccd298423798e2de0ed8ddb54997 452 PIRSF PIRSF002808 2 450 3.8E-45 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AYJ52_10940 74bbccd298423798e2de0ed8ddb54997 452 Gene3D G3DSA:1.20.1250.20 14 215 6.3E-48 T 11-10-2018 AYJ52_10940 74bbccd298423798e2de0ed8ddb54997 452 Pfam PF07690 Major Facilitator Superfamily 29 405 9.5E-58 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_01705 75b813a1ffedf9cd89f36f20c35159a7 372 Gene3D G3DSA:3.30.1540.10 232 314 1.4E-19 T 11-10-2018 AYJ52_01705 75b813a1ffedf9cd89f36f20c35159a7 372 Gene3D G3DSA:3.40.50.10540 2 231 4.7E-85 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AYJ52_01705 75b813a1ffedf9cd89f36f20c35159a7 372 Pfam PF02515 CoA-transferase family III 5 360 4.6E-94 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 AYJ52_01705 75b813a1ffedf9cd89f36f20c35159a7 372 SUPERFAMILY SSF89796 3 370 3.01E-107 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 Gene3D G3DSA:3.30.1330.20 226 340 4.6E-33 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 21 179 2.5E-42 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 SMART SM00865 212 331 3.6E-46 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 SUPERFAMILY SSF52490 18 213 2.09E-67 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 SMART SM00864 19 210 2.6E-109 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 PRINTS PR00423 Cell division protein FtsZ signature 132 153 4.2E-44 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 PRINTS PR00423 Cell division protein FtsZ signature 104 124 4.2E-44 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 PRINTS PR00423 Cell division protein FtsZ signature 217 238 4.2E-44 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 PRINTS PR00423 Cell division protein FtsZ signature 194 216 4.2E-44 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 Gene3D G3DSA:3.40.50.1440 11 225 4.1E-77 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 ProSitePatterns PS01134 FtsZ protein signature 1. 50 84 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 346 9.5E-125 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 15 367 35.87 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 ProSitePatterns PS01135 FtsZ protein signature 2. 103 124 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 SUPERFAMILY SSF55307 210 325 3.66E-37 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AYJ52_04120 4382ecb1afaa222f26fcdf69b2ac80cb 391 Pfam PF12327 FtsZ family, C-terminal domain 227 322 4.6E-31 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal AYJ52_13030 7a965630c5e0cf038ee7048103cb18f0 276 SUPERFAMILY SSF53850 37 273 1.68E-67 T 11-10-2018 AYJ52_13030 7a965630c5e0cf038ee7048103cb18f0 276 Gene3D G3DSA:3.40.190.10 117 222 4.7E-72 T 11-10-2018 AYJ52_13030 7a965630c5e0cf038ee7048103cb18f0 276 Gene3D G3DSA:3.40.190.10 43 264 4.7E-72 T 11-10-2018 AYJ52_13030 7a965630c5e0cf038ee7048103cb18f0 276 Pfam PF03180 NLPA lipoprotein 38 265 7.5E-73 T 11-10-2018 IPR004872 Lipoprotein NlpA family AYJ52_08555 fe243078970303299e9024ac5e5d9b91 326 SUPERFAMILY SSF46589 11 98 1.46E-19 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AYJ52_08555 fe243078970303299e9024ac5e5d9b91 326 SUPERFAMILY SSF55681 91 325 1.33E-81 T 11-10-2018 AYJ52_08555 fe243078970303299e9024ac5e5d9b91 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 18 86 7.4E-20 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AYJ52_08555 fe243078970303299e9024ac5e5d9b91 326 Gene3D G3DSA:3.30.930.10 7 326 8.8E-121 T 11-10-2018 AYJ52_08555 fe243078970303299e9024ac5e5d9b91 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 2.3E-104 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AYJ52_08555 fe243078970303299e9024ac5e5d9b91 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 47.184 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AYJ52_08555 fe243078970303299e9024ac5e5d9b91 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 325 4.3E-109 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AYJ52_10390 836fd7ac30d24d4ba70888e6bf8e8960 302 Gene3D G3DSA:1.10.10.10 3 88 2.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10390 836fd7ac30d24d4ba70888e6bf8e8960 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.9E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_10390 836fd7ac30d24d4ba70888e6bf8e8960 302 SUPERFAMILY SSF46785 5 115 3.01E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_10390 836fd7ac30d24d4ba70888e6bf8e8960 302 SUPERFAMILY SSF53850 92 299 3.5E-32 T 11-10-2018 AYJ52_10390 836fd7ac30d24d4ba70888e6bf8e8960 302 Gene3D G3DSA:3.40.190.10 96 290 2.2E-52 T 11-10-2018 AYJ52_10390 836fd7ac30d24d4ba70888e6bf8e8960 302 Gene3D G3DSA:3.40.190.10 165 268 2.2E-52 T 11-10-2018 AYJ52_10390 836fd7ac30d24d4ba70888e6bf8e8960 302 Pfam PF03466 LysR substrate binding domain 91 294 4.2E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_15840 507f171ef9bb459b3d9e91de555ddf5b 307 Pfam PF00994 Probable molybdopterin binding domain 151 291 3.0E-29 T 11-10-2018 IPR001453 MoaB/Mog domain AYJ52_15840 507f171ef9bb459b3d9e91de555ddf5b 307 SMART SM00852 151 293 1.3E-20 T 11-10-2018 IPR001453 MoaB/Mog domain AYJ52_15840 507f171ef9bb459b3d9e91de555ddf5b 307 Gene3D G3DSA:3.30.70.640 1 146 1.2E-47 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_15840 507f171ef9bb459b3d9e91de555ddf5b 307 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 149 287 2.5E-27 T 11-10-2018 IPR001453 MoaB/Mog domain AYJ52_15840 507f171ef9bb459b3d9e91de555ddf5b 307 SUPERFAMILY SSF53218 147 298 1.57E-36 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AYJ52_15840 507f171ef9bb459b3d9e91de555ddf5b 307 Pfam PF01967 MoaC family 1 136 1.5E-41 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_15840 507f171ef9bb459b3d9e91de555ddf5b 307 PIRSF PIRSF036594 1 304 1.2E-65 T 11-10-2018 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823 AYJ52_15840 507f171ef9bb459b3d9e91de555ddf5b 307 Gene3D G3DSA:3.40.980.10 147 302 8.3E-45 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AYJ52_15840 507f171ef9bb459b3d9e91de555ddf5b 307 SUPERFAMILY SSF55040 1 140 1.7E-44 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 147 1.8E-72 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 SUPERFAMILY SSF52283 8 460 7.37E-110 T 11-10-2018 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 Gene3D G3DSA:3.40.50.1480 370 460 3.9E-32 T 11-10-2018 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 SUPERFAMILY SSF51735 197 373 3.35E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 219 235 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 452 45.539 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 PIRSF PIRSF001109 1 460 2.3E-180 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 Gene3D G3DSA:3.40.50.1480 8 203 1.1E-91 T 11-10-2018 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 SMART SM00997 197 372 9.7E-86 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 197 372 2.4E-58 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 452 7.2E-159 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 SMART SM00996 10 459 1.1E-277 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AYJ52_17635 15f37fdd7fc5457f68dd972f4fcc69b1 460 Gene3D G3DSA:3.40.50.720 204 369 3.3E-68 T 11-10-2018 AYJ52_03055 6e7ccc68ea2308ee658bfb01896b4db7 410 SUPERFAMILY SSF51735 109 296 1.12E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_03055 6e7ccc68ea2308ee658bfb01896b4db7 410 Gene3D G3DSA:3.40.50.720 110 298 5.0E-108 T 11-10-2018 AYJ52_03055 6e7ccc68ea2308ee658bfb01896b4db7 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 295 3.7E-52 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AYJ52_03055 6e7ccc68ea2308ee658bfb01896b4db7 410 SUPERFAMILY SSF55021 333 409 2.24E-19 T 11-10-2018 AYJ52_03055 6e7ccc68ea2308ee658bfb01896b4db7 410 Gene3D G3DSA:3.30.70.260 329 409 1.5E-30 T 11-10-2018 AYJ52_03055 6e7ccc68ea2308ee658bfb01896b4db7 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 327 3.3E-36 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AYJ52_03055 6e7ccc68ea2308ee658bfb01896b4db7 410 SUPERFAMILY SSF52283 9 135 1.02E-49 T 11-10-2018 AYJ52_03055 6e7ccc68ea2308ee658bfb01896b4db7 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AYJ52_03055 6e7ccc68ea2308ee658bfb01896b4db7 410 Gene3D G3DSA:3.40.50.720 15 313 5.0E-108 T 11-10-2018 AYJ52_07185 d294b703fb33fed6bc05955e606ab818 448 PIRSF PIRSF006603 8 447 3.7E-61 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AYJ52_07185 d294b703fb33fed6bc05955e606ab818 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 420 1.8E-87 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AYJ52_07185 d294b703fb33fed6bc05955e606ab818 448 Pfam PF01554 MatE 246 405 1.3E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AYJ52_07185 d294b703fb33fed6bc05955e606ab818 448 Pfam PF01554 MatE 20 179 2.0E-28 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AYJ52_10455 98d21b067326f70f4a9da06820ff0537 441 Pfam PF01595 Domain of unknown function DUF21 8 199 4.9E-38 T 11-10-2018 IPR002550 CNNM, transmembrane domain AYJ52_10455 98d21b067326f70f4a9da06820ff0537 441 Gene3D G3DSA:3.10.580.10 195 349 1.8E-34 T 11-10-2018 AYJ52_10455 98d21b067326f70f4a9da06820ff0537 441 SUPERFAMILY SSF56176 347 433 1.25E-23 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AYJ52_10455 98d21b067326f70f4a9da06820ff0537 441 Pfam PF00571 CBS domain 288 331 4.9E-5 T 11-10-2018 IPR000644 CBS domain AYJ52_10455 98d21b067326f70f4a9da06820ff0537 441 Gene3D G3DSA:3.30.465.10 350 429 1.2E-30 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AYJ52_10455 98d21b067326f70f4a9da06820ff0537 441 SUPERFAMILY SSF54631 201 336 4.15E-23 T 11-10-2018 AYJ52_10455 98d21b067326f70f4a9da06820ff0537 441 SMART SM01091 349 429 2.1E-29 T 11-10-2018 IPR005170 Transporter-associated domain AYJ52_10455 98d21b067326f70f4a9da06820ff0537 441 Pfam PF03471 Transporter associated domain 350 427 5.1E-22 T 11-10-2018 IPR005170 Transporter-associated domain AYJ52_05865 77e0ef415d045585fb7e2bf886551573 160 Pfam PF11008 Protein of unknown function (DUF2846) 15 127 1.6E-31 T 11-10-2018 IPR022548 Domain of unknown function DUF2846 AYJ52_05865 77e0ef415d045585fb7e2bf886551573 160 PIRSF PIRSF012335 1 154 1.3E-65 T 11-10-2018 IPR016596 Protein of unknown function UCP012335 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 191 207 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 587 616 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 250 265 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 389 409 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 545 565 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 138 151 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 719 745 5.9E-68 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 Pfam PF00311 Phosphoenolpyruvate carboxylase 134 894 6.8E-280 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 547 559 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 Gene3D G3DSA:1.20.1440.90 306 392 4.1E-22 T 11-10-2018 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 139 150 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 894 18.601 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AYJ52_04770 5289bb326311b8cd52ad14c2cd79cfff 894 SUPERFAMILY SSF51621 6 894 0.0 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AYJ52_07395 e585d2554984d951bb723c61a327045c 636 Gene3D G3DSA:3.40.50.300 4 278 2.8E-65 T 11-10-2018 AYJ52_07395 e585d2554984d951bb723c61a327045c 636 Pfam PF16326 ABC transporter C-terminal domain 562 631 4.6E-19 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AYJ52_07395 e585d2554984d951bb723c61a327045c 636 Pfam PF12848 ABC transporter 223 298 1.3E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain AYJ52_07395 e585d2554984d951bb723c61a327045c 636 Pfam PF00005 ABC transporter 335 467 1.4E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_07395 e585d2554984d951bb723c61a327045c 636 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_07395 e585d2554984d951bb723c61a327045c 636 Gene3D G3DSA:1.10.287.380 551 636 2.0E-21 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AYJ52_07395 e585d2554984d951bb723c61a327045c 636 SUPERFAMILY SSF52540 3 241 1.33E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07395 e585d2554984d951bb723c61a327045c 636 Gene3D G3DSA:3.40.50.300 281 550 3.4E-61 T 11-10-2018 AYJ52_07395 e585d2554984d951bb723c61a327045c 636 Pfam PF00005 ABC transporter 19 183 1.1E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_07395 e585d2554984d951bb723c61a327045c 636 SUPERFAMILY SSF52540 305 517 1.22E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07395 e585d2554984d951bb723c61a327045c 636 SMART SM00382 28 230 1.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_07395 e585d2554984d951bb723c61a327045c 636 SMART SM00382 343 513 3.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_05275 35fe31b9c75d5252f24cae0be3de452f 231 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 28 131 1.2E-27 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AYJ52_05275 35fe31b9c75d5252f24cae0be3de452f 231 Gene3D G3DSA:3.10.50.40 123 230 4.6E-42 T 11-10-2018 AYJ52_05275 35fe31b9c75d5252f24cae0be3de452f 231 SUPERFAMILY SSF54534 31 229 1.28E-59 T 11-10-2018 AYJ52_05275 35fe31b9c75d5252f24cae0be3de452f 231 Gene3D G3DSA:1.10.287.460 23 122 6.1E-24 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AYJ52_05275 35fe31b9c75d5252f24cae0be3de452f 231 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 138 226 1.9E-27 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ52_08780 650cd97bc3071df82ce99abfc53f0e57 221 Gene3D G3DSA:3.30.420.40 95 176 6.1E-57 T 11-10-2018 AYJ52_08780 650cd97bc3071df82ce99abfc53f0e57 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 207 4.2E-51 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AYJ52_08780 650cd97bc3071df82ce99abfc53f0e57 221 SUPERFAMILY SSF53067 1 103 1.81E-23 T 11-10-2018 AYJ52_08780 650cd97bc3071df82ce99abfc53f0e57 221 SUPERFAMILY SSF53067 111 205 2.07E-13 T 11-10-2018 AYJ52_08780 650cd97bc3071df82ce99abfc53f0e57 221 Gene3D G3DSA:3.30.420.40 3 207 6.1E-57 T 11-10-2018 AYJ52_08780 650cd97bc3071df82ce99abfc53f0e57 221 Pfam PF00814 Glycoprotease family 33 135 4.1E-24 T 11-10-2018 IPR000905 Gcp-like domain AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 SUPERFAMILY SSF63882 9 180 6.28E-40 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 SMART SM00852 185 328 7.6E-28 T 11-10-2018 IPR001453 MoaB/Mog domain AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 SUPERFAMILY SSF63867 338 402 1.83E-11 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 SUPERFAMILY SSF53218 182 331 1.44E-32 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 Gene3D G3DSA:3.40.980.10 180 336 4.0E-102 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 182 321 7.9E-25 T 11-10-2018 IPR001453 MoaB/Mog domain AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 Gene3D G3DSA:3.90.105.10 32 179 4.0E-102 T 11-10-2018 AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 Pfam PF03454 MoeA C-terminal region (domain IV) 341 401 6.0E-11 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 Gene3D G3DSA:2.170.190.11 53 146 4.0E-102 T 11-10-2018 AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 Pfam PF00994 Probable molybdopterin binding domain 185 323 5.5E-26 T 11-10-2018 IPR001453 MoaB/Mog domain AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 172 6.0E-29 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_15835 1c21c3bc10353eb305878c8130a2ffbf 411 Gene3D G3DSA:2.40.340.10 337 401 4.0E-102 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.4E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 Gene3D G3DSA:3.40.50.720 1 244 4.3E-71 T 11-10-2018 AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 2.6E-60 T 11-10-2018 AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.0038 T 11-10-2018 AYJ52_12635 bfa0ac0152bbcafefce9eb3cbbd18b50 245 SUPERFAMILY SSF51735 6 244 7.7E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 Gene3D G3DSA:3.40.50.720 3 230 2.3E-57 T 11-10-2018 AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 4.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 4.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 4.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 Pfam PF00106 short chain dehydrogenase 5 190 6.6E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 4.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 4.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 4.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 4.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 4.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08445 160a5c220ab0613c340fbac7176a6109 257 SUPERFAMILY SSF51735 5 234 1.14E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_13485 d08e3889594037d02dfb9be09b801bb3 251 Gene3D G3DSA:3.10.610.10 78 183 1.6E-6 T 11-10-2018 AYJ52_13485 d08e3889594037d02dfb9be09b801bb3 251 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 47 67 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_13485 d08e3889594037d02dfb9be09b801bb3 251 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 46 67 1.9E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_13485 d08e3889594037d02dfb9be09b801bb3 251 SUPERFAMILY SSF54523 80 240 8.89E-23 T 11-10-2018 AYJ52_13485 d08e3889594037d02dfb9be09b801bb3 251 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 48 226 1.7E-20 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AYJ52_13485 d08e3889594037d02dfb9be09b801bb3 251 Pfam PF11612 Type II secretion system (T2SS), protein J 101 230 6.5E-17 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AYJ52_13485 d08e3889594037d02dfb9be09b801bb3 251 Pfam PF07963 Prokaryotic N-terminal methylation motif 45 67 1.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_14650 e2af60be4923bf3458dc6b88e67d11a2 595 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 129 139 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_14650 e2af60be4923bf3458dc6b88e67d11a2 595 Pfam PF00920 Dehydratase family 46 572 2.3E-156 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_14650 e2af60be4923bf3458dc6b88e67d11a2 595 SUPERFAMILY SSF52016 383 579 4.87E-46 T 11-10-2018 AYJ52_14650 e2af60be4923bf3458dc6b88e67d11a2 595 SUPERFAMILY SSF143975 9 380 6.8E-115 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_14650 e2af60be4923bf3458dc6b88e67d11a2 595 Gene3D G3DSA:3.50.30.80 383 547 2.6E-34 T 11-10-2018 AYJ52_11710 5da7f43d5a53a070d98ee7de05a94445 280 SUPERFAMILY SSF52402 1 157 6.7E-11 T 11-10-2018 AYJ52_11710 5da7f43d5a53a070d98ee7de05a94445 280 PRINTS PR01438 Universal stress protein signature 240 252 2.4E-8 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_11710 5da7f43d5a53a070d98ee7de05a94445 280 PRINTS PR01438 Universal stress protein signature 1 11 2.4E-8 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_11710 5da7f43d5a53a070d98ee7de05a94445 280 PRINTS PR01438 Universal stress protein signature 258 280 2.4E-8 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_11710 5da7f43d5a53a070d98ee7de05a94445 280 SUPERFAMILY SSF52402 166 280 2.09E-19 T 11-10-2018 AYJ52_11710 5da7f43d5a53a070d98ee7de05a94445 280 Gene3D G3DSA:3.40.50.12370 2 280 7.5E-46 T 11-10-2018 AYJ52_11710 5da7f43d5a53a070d98ee7de05a94445 280 Pfam PF00582 Universal stress protein family 213 280 1.1E-10 T 11-10-2018 IPR006016 UspA AYJ52_11710 5da7f43d5a53a070d98ee7de05a94445 280 Pfam PF00582 Universal stress protein family 2 156 8.2E-6 T 11-10-2018 IPR006016 UspA AYJ52_06685 ffa362283f6be8866d447f97b9e6425a 193 Pfam PF03922 OmpW family 19 193 2.5E-30 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AYJ52_06685 ffa362283f6be8866d447f97b9e6425a 193 SUPERFAMILY SSF56925 19 193 1.28E-20 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AYJ52_06685 ffa362283f6be8866d447f97b9e6425a 193 Gene3D G3DSA:2.40.160.20 18 193 3.1E-35 T 11-10-2018 AYJ52_07515 b01424eb70d453b78902b9c47cd8f221 169 SUPERFAMILY SSF53597 6 169 9.68E-51 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AYJ52_07515 b01424eb70d453b78902b9c47cd8f221 169 PRINTS PR00070 Dihydrofolate reductase signature 103 117 4.0E-15 T 11-10-2018 AYJ52_07515 b01424eb70d453b78902b9c47cd8f221 169 PRINTS PR00070 Dihydrofolate reductase signature 46 57 4.0E-15 T 11-10-2018 AYJ52_07515 b01424eb70d453b78902b9c47cd8f221 169 PRINTS PR00070 Dihydrofolate reductase signature 19 29 4.0E-15 T 11-10-2018 AYJ52_07515 b01424eb70d453b78902b9c47cd8f221 169 PRINTS PR00070 Dihydrofolate reductase signature 33 41 4.0E-15 T 11-10-2018 AYJ52_07515 b01424eb70d453b78902b9c47cd8f221 169 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 19 41 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 AYJ52_07515 b01424eb70d453b78902b9c47cd8f221 169 PIRSF PIRSF000194 2 169 2.2E-53 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 AYJ52_07515 b01424eb70d453b78902b9c47cd8f221 169 Gene3D G3DSA:3.40.430.10 6 169 1.8E-51 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AYJ52_07515 b01424eb70d453b78902b9c47cd8f221 169 Pfam PF00186 Dihydrofolate reductase 8 169 4.3E-55 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AYJ52_02090 c351ba251b0065032d3feef4e7cfbfb0 162 Gene3D G3DSA:3.30.70.990 9 95 2.0E-28 T 11-10-2018 IPR035570 UPF0234, N-terminal AYJ52_02090 c351ba251b0065032d3feef4e7cfbfb0 162 SUPERFAMILY SSF89963 90 162 2.62E-27 T 11-10-2018 IPR036183 YajQ-like superfamily AYJ52_02090 c351ba251b0065032d3feef4e7cfbfb0 162 Pfam PF04461 Protein of unknown function (DUF520) 2 161 8.1E-62 T 11-10-2018 IPR007551 Protein of unknown function DUF520 AYJ52_02090 c351ba251b0065032d3feef4e7cfbfb0 162 Gene3D G3DSA:3.30.70.860 96 162 2.3E-29 T 11-10-2018 IPR035571 UPF0234-like, C-terminal AYJ52_02090 c351ba251b0065032d3feef4e7cfbfb0 162 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 162 25.574 T 11-10-2018 IPR007551 Protein of unknown function DUF520 AYJ52_02090 c351ba251b0065032d3feef4e7cfbfb0 162 SUPERFAMILY SSF89963 2 87 2.2E-28 T 11-10-2018 IPR036183 YajQ-like superfamily AYJ52_15180 148dfbb38d4d190061795252b0397906 277 Pfam PF01487 Type I 3-dehydroquinase 43 269 1.3E-62 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_15180 148dfbb38d4d190061795252b0397906 277 ProSitePatterns PS01028 Dehydroquinase class I active site. 138 168 - T 11-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_15180 148dfbb38d4d190061795252b0397906 277 Gene3D G3DSA:3.20.20.70 29 274 6.6E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_15180 148dfbb38d4d190061795252b0397906 277 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 40 272 37.677 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_15180 148dfbb38d4d190061795252b0397906 277 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 40 269 2.9E-80 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_15180 148dfbb38d4d190061795252b0397906 277 SUPERFAMILY SSF51569 35 272 1.39E-68 T 11-10-2018 AYJ52_09815 50cb467ec0a00a9b3d6c710a60ab899a 260 Gene3D G3DSA:3.40.630.30 32 194 2.5E-17 T 11-10-2018 AYJ52_09815 50cb467ec0a00a9b3d6c710a60ab899a 260 SUPERFAMILY SSF55729 25 231 1.48E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_09815 50cb467ec0a00a9b3d6c710a60ab899a 260 Pfam PF13444 Acetyltransferase (GNAT) domain 45 140 9.4E-17 T 11-10-2018 AYJ52_16260 46bba21d840e4de10da6f5379d81a445 744 SUPERFAMILY SSF56935 59 744 5.29E-134 T 11-10-2018 AYJ52_16260 46bba21d840e4de10da6f5379d81a445 744 Pfam PF00593 TonB dependent receptor 239 743 1.1E-60 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_16260 46bba21d840e4de10da6f5379d81a445 744 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 163 7.6E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_16260 46bba21d840e4de10da6f5379d81a445 744 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 743 2.1E-90 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_16260 46bba21d840e4de10da6f5379d81a445 744 Gene3D G3DSA:2.40.170.20 178 744 2.2E-144 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_16260 46bba21d840e4de10da6f5379d81a445 744 Gene3D G3DSA:2.170.130.10 48 175 1.4E-41 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_15635 62a024ee6dc8980d0c64c297a7888a95 160 Hamap MF_01114 Regulatory protein RecX [recX]. 17 160 13.59 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AYJ52_15635 62a024ee6dc8980d0c64c297a7888a95 160 Pfam PF02631 RecX family 47 157 7.2E-29 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AYJ52_15635 62a024ee6dc8980d0c64c297a7888a95 160 Gene3D G3DSA:1.10.10.10 110 160 1.3E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15635 62a024ee6dc8980d0c64c297a7888a95 160 Gene3D G3DSA:1.10.10.10 67 108 4.2E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15635 62a024ee6dc8980d0c64c297a7888a95 160 Gene3D G3DSA:1.10.10.10 21 65 1.5E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_09695 bdc94b73332620bdfad57ef79238c924 439 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 150 203 0.001 T 11-10-2018 AYJ52_09695 bdc94b73332620bdfad57ef79238c924 439 Pfam PF12787 EcsC protein family 67 319 3.1E-20 T 11-10-2018 IPR024787 EcsC protein AYJ52_19035 25814de6783a8fbea63e330f97b5ee34 277 Pfam PF16932 Type IV secretory system, conjugal DNA-protein transfer 34 245 1.7E-41 T 11-10-2018 IPR031618 Putative type IV secretory system protein AYJ52_08195 abeb88daa757d58945f634dc7ee4ad7a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08195 abeb88daa757d58945f634dc7ee4ad7a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08195 abeb88daa757d58945f634dc7ee4ad7a 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08195 abeb88daa757d58945f634dc7ee4ad7a 297 SUPERFAMILY SSF46785 3 85 1.22E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_08195 abeb88daa757d58945f634dc7ee4ad7a 297 Gene3D G3DSA:3.40.190.10 166 271 1.7E-34 T 11-10-2018 AYJ52_08195 abeb88daa757d58945f634dc7ee4ad7a 297 SUPERFAMILY SSF53850 120 284 6.83E-16 T 11-10-2018 AYJ52_08195 abeb88daa757d58945f634dc7ee4ad7a 297 Gene3D G3DSA:3.40.190.10 120 284 1.7E-34 T 11-10-2018 AYJ52_08195 abeb88daa757d58945f634dc7ee4ad7a 297 Gene3D G3DSA:1.10.10.10 2 95 3.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_08195 abeb88daa757d58945f634dc7ee4ad7a 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.0E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08195 abeb88daa757d58945f634dc7ee4ad7a 297 Pfam PF03466 LysR substrate binding domain 120 282 1.7E-17 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_06460 a2a1547da43a992c08135b8d40a06960 307 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 23 303 39.161 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AYJ52_06460 a2a1547da43a992c08135b8d40a06960 307 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 23 275 5.7E-105 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AYJ52_06460 a2a1547da43a992c08135b8d40a06960 307 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 26 255 3.0E-47 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AYJ52_06460 a2a1547da43a992c08135b8d40a06960 307 Gene3D G3DSA:3.40.50.620 23 297 4.0E-100 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_06460 a2a1547da43a992c08135b8d40a06960 307 SUPERFAMILY SSF52374 23 296 4.79E-78 T 11-10-2018 AYJ52_06460 a2a1547da43a992c08135b8d40a06960 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 202 210 2.6E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_06460 a2a1547da43a992c08135b8d40a06960 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 26 38 2.6E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_06460 a2a1547da43a992c08135b8d40a06960 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 196 2.6E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_06460 a2a1547da43a992c08135b8d40a06960 307 PRINTS PR00987 Glutamyl-tRNA synthetase signature 55 68 2.6E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_06460 a2a1547da43a992c08135b8d40a06960 307 Gene3D G3DSA:3.40.50.620 98 234 4.0E-100 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_18970 43a50ad53e656ae1da7e711686fce407 296 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 21 175 1.2E-25 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AYJ52_18970 43a50ad53e656ae1da7e711686fce407 296 Gene3D G3DSA:3.90.1530.30 36 100 2.1E-13 T 11-10-2018 AYJ52_18970 43a50ad53e656ae1da7e711686fce407 296 SMART SM00470 23 112 7.0E-13 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AYJ52_18970 43a50ad53e656ae1da7e711686fce407 296 Pfam PF02195 ParB-like nuclease domain 24 100 1.1E-14 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AYJ52_18970 43a50ad53e656ae1da7e711686fce407 296 SUPERFAMILY SSF110849 24 100 9.07E-16 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AYJ52_18970 43a50ad53e656ae1da7e711686fce407 296 SUPERFAMILY SSF109709 106 211 2.35E-6 T 11-10-2018 AYJ52_16560 1fe92ac193fc1aa28d721fba2147324a 201 PIRSF PIRSF001296 12 201 4.9E-68 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AYJ52_16560 1fe92ac193fc1aa28d721fba2147324a 201 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 15 197 1.2E-57 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AYJ52_16560 1fe92ac193fc1aa28d721fba2147324a 201 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 13 197 31.476 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AYJ52_16560 1fe92ac193fc1aa28d721fba2147324a 201 Pfam PF02669 K+-transporting ATPase, c chain 17 196 2.5E-65 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AYJ52_14350 9550014bcd965bc76281bf579ef949dc 521 SUPERFAMILY SSF56024 73 229 2.69E-36 T 11-10-2018 AYJ52_14350 9550014bcd965bc76281bf579ef949dc 521 SMART SM00155 412 438 3.7E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AYJ52_14350 9550014bcd965bc76281bf579ef949dc 521 SMART SM00155 164 191 0.016 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AYJ52_14350 9550014bcd965bc76281bf579ef949dc 521 SUPERFAMILY SSF56024 273 473 6.5E-29 T 11-10-2018 AYJ52_14350 9550014bcd965bc76281bf579ef949dc 521 Gene3D G3DSA:3.30.870.10 287 478 1.9E-35 T 11-10-2018 AYJ52_14350 9550014bcd965bc76281bf579ef949dc 521 Gene3D G3DSA:3.30.870.10 62 249 5.7E-37 T 11-10-2018 AYJ52_14350 9550014bcd965bc76281bf579ef949dc 521 Pfam PF13091 PLD-like domain 76 223 4.9E-17 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AYJ52_14350 9550014bcd965bc76281bf579ef949dc 521 Pfam PF13091 PLD-like domain 316 464 1.3E-17 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 Hamap MF_01183 Chaperone SurA [surA]. 5 427 25.235 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 SUPERFAMILY SSF54534 182 275 7.85E-11 T 11-10-2018 AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 Gene3D G3DSA:1.10.4030.30 31 279 6.9E-45 T 11-10-2018 AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 320 341 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 Gene3D G3DSA:3.10.50.40 179 274 6.9E-45 T 11-10-2018 AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 Gene3D G3DSA:3.10.50.40 280 419 3.5E-42 T 11-10-2018 AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 Pfam PF00639 PPIC-type PPIASE domain 190 270 9.8E-6 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 SUPERFAMILY SSF54534 283 384 8.5E-33 T 11-10-2018 AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 SUPERFAMILY SSF109998 31 191 1.26E-26 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 Pfam PF13616 PPIC-type PPIASE domain 281 383 3.4E-31 T 11-10-2018 AYJ52_13395 acc40f679c8509761c31c5fef120151b 436 Pfam PF09312 SurA N-terminal domain 31 149 2.6E-23 T 11-10-2018 IPR015391 SurA N-terminal AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 379 2.4E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 SUPERFAMILY SSF158472 265 312 1.83E-7 T 11-10-2018 AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 SUPERFAMILY SSF55874 368 534 4.58E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 SMART SM00304 261 313 5.2E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 SMART SM00388 314 379 2.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 Gene3D G3DSA:3.30.565.10 386 536 1.4E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 533 8.0E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 Pfam PF00672 HAMP domain 265 310 3.6E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 Gene3D G3DSA:1.10.287.130 265 380 1.7E-25 T 11-10-2018 AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 SMART SM00387 423 535 5.9E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_09120 fe30d62bb5211c9cdaba7ba68a8a48e0 549 SUPERFAMILY SSF47384 297 379 4.32E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_02805 ca4f9bfe249bc5f5d6a8052f0a6ec9da 272 Gene3D G3DSA:3.40.50.300 10 265 9.4E-68 T 11-10-2018 AYJ52_02805 ca4f9bfe249bc5f5d6a8052f0a6ec9da 272 Pfam PF00005 ABC transporter 28 177 5.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_02805 ca4f9bfe249bc5f5d6a8052f0a6ec9da 272 SUPERFAMILY SSF52540 11 238 1.9E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02805 ca4f9bfe249bc5f5d6a8052f0a6ec9da 272 SMART SM00382 37 234 5.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_09730 82d225df43cff89548dac5e4e1fb82db 153 SUPERFAMILY SSF55729 1 142 1.32E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_09730 82d225df43cff89548dac5e4e1fb82db 153 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 9 139 3.4E-36 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AYJ52_09730 82d225df43cff89548dac5e4e1fb82db 153 Gene3D G3DSA:3.40.630.30 1 148 1.2E-39 T 11-10-2018 AYJ52_09730 82d225df43cff89548dac5e4e1fb82db 153 Pfam PF00583 Acetyltransferase (GNAT) family 18 116 8.6E-16 T 11-10-2018 IPR000182 GNAT domain AYJ52_10550 8a2eee2c1ff7692931e2fc9789dc8bd0 263 Pfam PF04060 Putative Fe-S cluster 15 47 1.5E-9 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 AYJ52_10550 8a2eee2c1ff7692931e2fc9789dc8bd0 263 Gene3D G3DSA:3.30.70.20 85 182 5.6E-16 T 11-10-2018 AYJ52_10550 8a2eee2c1ff7692931e2fc9789dc8bd0 263 SUPERFAMILY SSF54862 10 142 3.22E-25 T 11-10-2018 AYJ52_10550 8a2eee2c1ff7692931e2fc9789dc8bd0 263 Pfam PF14697 4Fe-4S dicluster domain 85 138 1.2E-15 T 11-10-2018 AYJ52_10550 8a2eee2c1ff7692931e2fc9789dc8bd0 263 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 151 1.8E-55 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AYJ52_10550 8a2eee2c1ff7692931e2fc9789dc8bd0 263 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ52_10550 8a2eee2c1ff7692931e2fc9789dc8bd0 263 Gene3D G3DSA:3.20.20.20 7 71 1.7E-7 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_08015 2248d66efd2bd20f58daef5518751bca 2030 SUPERFAMILY SSF49464 481 553 2.04E-6 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AYJ52_08015 2248d66efd2bd20f58daef5518751bca 2030 Pfam PF01345 Domain of unknown function DUF11 618 706 7.1E-9 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_08015 2248d66efd2bd20f58daef5518751bca 2030 Gene3D G3DSA:2.60.40.1120 480 569 2.8E-5 T 11-10-2018 AYJ52_08015 2248d66efd2bd20f58daef5518751bca 2030 Pfam PF17210 SdrD B-like domain 751 807 1.0E-9 T 11-10-2018 IPR033764 SD-repeat containing protein, B domain AYJ52_08015 2248d66efd2bd20f58daef5518751bca 2030 SUPERFAMILY SSF117074 749 805 8.76E-8 T 11-10-2018 AYJ52_08015 2248d66efd2bd20f58daef5518751bca 2030 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 624 671 1.7E-11 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_08015 2248d66efd2bd20f58daef5518751bca 2030 Gene3D G3DSA:2.60.40.10 748 848 7.3E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_05880 7ed90fdb887d36cf3b3c11a98136088f 254 SUPERFAMILY SSF46689 207 254 2.33E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_05880 7ed90fdb887d36cf3b3c11a98136088f 254 Pfam PF12833 Helix-turn-helix domain 178 253 1.5E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_05880 7ed90fdb887d36cf3b3c11a98136088f 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 248 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AYJ52_05880 7ed90fdb887d36cf3b3c11a98136088f 254 Gene3D G3DSA:1.10.10.60 156 254 1.3E-17 T 11-10-2018 AYJ52_05880 7ed90fdb887d36cf3b3c11a98136088f 254 SUPERFAMILY SSF51182 14 163 9.78E-6 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_05880 7ed90fdb887d36cf3b3c11a98136088f 254 SMART SM00342 170 252 1.7E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 4.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 4.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 4.5E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 204 7.0E-6 T 11-10-2018 AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 SUPERFAMILY SSF51735 1 242 1.02E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.3E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.3E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.3E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.3E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 Pfam PF00106 short chain dehydrogenase 9 197 1.1E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14885 ae1f2d28b6bc22ece889dc889977d73a 303 Gene3D G3DSA:3.40.50.720 8 298 5.0E-75 T 11-10-2018 AYJ52_01015 1a6a694078e88a85446408d97ca414d0 549 Pfam PF08019 Domain of unknown function (DUF1705) 61 209 6.8E-42 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AYJ52_01015 1a6a694078e88a85446408d97ca414d0 549 Gene3D G3DSA:3.40.720.10 220 549 1.0E-91 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AYJ52_01015 1a6a694078e88a85446408d97ca414d0 549 SUPERFAMILY SSF53649 239 533 3.27E-27 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AYJ52_01015 1a6a694078e88a85446408d97ca414d0 549 Pfam PF00884 Sulfatase 239 530 6.2E-56 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Pfam PF00488 MutS domain V 624 808 5.1E-80 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Gene3D G3DSA:1.10.1420.10 277 572 9.3E-97 T 11-10-2018 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 SUPERFAMILY SSF55271 8 120 2.49E-39 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 SMART SM00533 293 604 4.7E-97 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Gene3D G3DSA:3.40.1170.10 5 126 2.9E-48 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 13 869 24.03 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 SUPERFAMILY SSF53150 119 277 5.23E-37 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 SUPERFAMILY SSF52540 580 810 2.95E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 PIRSF PIRSF037677 7 858 1.0E-149 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Pfam PF05190 MutS family domain IV 441 531 3.2E-31 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 SUPERFAMILY SSF48334 278 579 5.49E-83 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Gene3D G3DSA:3.40.50.300 581 878 6.4E-97 T 11-10-2018 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Pfam PF05188 MutS domain II 141 264 1.3E-20 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Gene3D G3DSA:1.10.1420.10 400 516 9.3E-97 T 11-10-2018 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Pfam PF01624 MutS domain I 14 124 1.5E-40 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 701 717 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 13 874 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Pfam PF05192 MutS domain III 281 572 4.4E-36 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 Gene3D G3DSA:3.30.420.110 134 273 4.1E-36 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AYJ52_11735 a37cd721605deb2218223ebc024efcb8 879 SMART SM00534 620 806 5.0E-110 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 17 34 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 41 53 3.6E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 3.6E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 353 365 3.6E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 25 35 3.6E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 86 98 3.6E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 12 24 3.6E-28 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 Gene3D G3DSA:3.30.9.10 90 326 1.7E-134 T 11-10-2018 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 SUPERFAMILY SSF51905 10 300 4.96E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 Gene3D G3DSA:3.50.50.60 13 372 1.7E-134 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 358 368 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 Pfam PF01266 FAD dependent oxidoreductase 13 364 1.8E-46 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 387 486 1.1E-14 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AYJ52_00540 c80b628e46bdb5c32f4e15ac03780f1d 505 Gene3D G3DSA:1.10.8.870 399 467 1.4E-17 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AYJ52_17755 fa9be9b838328a74c2057ad8637c2745 268 Gene3D G3DSA:3.20.20.70 2 267 2.5E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_17755 fa9be9b838328a74c2057ad8637c2745 268 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AYJ52_17755 fa9be9b838328a74c2057ad8637c2745 268 SUPERFAMILY SSF51366 16 263 6.95E-87 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AYJ52_17755 fa9be9b838328a74c2057ad8637c2745 268 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 7 263 35.503 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AYJ52_17755 fa9be9b838328a74c2057ad8637c2745 268 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 261 3.1E-99 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AYJ52_18240 5ca1b78803e85ece81989a757a3adb00 300 Gene3D G3DSA:3.40.50.300 52 298 8.6E-63 T 11-10-2018 AYJ52_18240 5ca1b78803e85ece81989a757a3adb00 300 ProSitePatterns PS00211 ABC transporters family signature. 197 211 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_18240 5ca1b78803e85ece81989a757a3adb00 300 Pfam PF00005 ABC transporter 69 224 6.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_18240 5ca1b78803e85ece81989a757a3adb00 300 SUPERFAMILY SSF52540 52 288 2.46E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18240 5ca1b78803e85ece81989a757a3adb00 300 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 53 300 7.4E-123 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AYJ52_18240 5ca1b78803e85ece81989a757a3adb00 300 SMART SM00382 77 272 8.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_03010 0f1d6becc6700a00d82bbd8b799bf993 372 Pfam PF01594 AI-2E family transporter 12 344 8.9E-44 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 SUPERFAMILY SSF55979 3 120 1.08E-23 T 11-10-2018 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 Gene3D G3DSA:3.10.150.10 264 382 1.2E-35 T 11-10-2018 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 SMART SM00480 17 378 3.6E-120 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 381 5.2E-93 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 SUPERFAMILY SSF55979 261 382 8.08E-35 T 11-10-2018 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 Gene3D G3DSA:3.10.150.10 1 126 3.1E-35 T 11-10-2018 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 Gene3D G3DSA:3.10.150.10 129 263 3.6E-32 T 11-10-2018 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 261 381 3.7E-35 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 122 5.5E-31 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 PIRSF PIRSF000804 1 382 3.7E-107 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 SUPERFAMILY SSF55979 131 260 2.3E-21 T 11-10-2018 AYJ52_04910 d66681220ca7ed8a306cf80a8b7fb93f 382 Pfam PF02767 DNA polymerase III beta subunit, central domain 133 259 1.5E-29 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AYJ52_14900 04e1289c818c1b361684e92cf5fbf6be 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 2.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14900 04e1289c818c1b361684e92cf5fbf6be 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 2.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14900 04e1289c818c1b361684e92cf5fbf6be 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 2.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14900 04e1289c818c1b361684e92cf5fbf6be 311 Pfam PF03466 LysR substrate binding domain 106 297 1.2E-17 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14900 04e1289c818c1b361684e92cf5fbf6be 311 Gene3D G3DSA:1.10.10.10 6 97 3.0E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14900 04e1289c818c1b361684e92cf5fbf6be 311 Gene3D G3DSA:3.40.190.10 98 296 8.3E-43 T 11-10-2018 AYJ52_14900 04e1289c818c1b361684e92cf5fbf6be 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 73 7.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14900 04e1289c818c1b361684e92cf5fbf6be 311 SUPERFAMILY SSF53850 105 307 1.25E-28 T 11-10-2018 AYJ52_14900 04e1289c818c1b361684e92cf5fbf6be 311 SUPERFAMILY SSF46785 12 95 7.89E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14900 04e1289c818c1b361684e92cf5fbf6be 311 Gene3D G3DSA:3.40.190.10 179 279 8.3E-43 T 11-10-2018 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 Gene3D G3DSA:3.30.1360.30 275 423 1.3E-197 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 SUPERFAMILY SSF55681 118 586 4.98E-104 T 11-10-2018 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 SUPERFAMILY SSF55261 293 422 4.58E-44 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 Gene3D G3DSA:2.40.50.140 1 107 2.2E-34 T 11-10-2018 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 6.0E-109 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 8.9E-242 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 Pfam PF02938 GAD domain 311 409 2.3E-30 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 2.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 2.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 2.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 2.1E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 Gene3D G3DSA:3.30.930.10 120 582 1.3E-197 T 11-10-2018 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 Pfam PF01336 OB-fold nucleic acid binding domain 19 103 1.1E-17 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 SUPERFAMILY SSF50249 2 106 3.05E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_01920 2a71d9b26d4d505c11da9d4e6b17e820 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 33.448 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AYJ52_03160 92a97b7d24392f7ffe7592d8120081c6 92 Gene3D G3DSA:3.90.940.10 1 84 2.1E-27 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AYJ52_03160 92a97b7d24392f7ffe7592d8120081c6 92 SMART SM01409 8 61 1.4E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AYJ52_03160 92a97b7d24392f7ffe7592d8120081c6 92 Pfam PF01192 RNA polymerase Rpb6 8 59 4.3E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AYJ52_03160 92a97b7d24392f7ffe7592d8120081c6 92 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.5E-22 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_03160 92a97b7d24392f7ffe7592d8120081c6 92 SUPERFAMILY SSF63562 1 70 1.26E-25 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AYJ52_03160 92a97b7d24392f7ffe7592d8120081c6 92 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.213 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 Pfam PF14698 Argininosuccinate lyase C-terminal 379 448 1.2E-25 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 PRINTS PR00145 Argininosuccinate lyase family signature 209 225 3.7E-68 T 11-10-2018 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 PRINTS PR00145 Argininosuccinate lyase family signature 247 271 3.7E-68 T 11-10-2018 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 PRINTS PR00145 Argininosuccinate lyase family signature 158 178 3.7E-68 T 11-10-2018 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 PRINTS PR00145 Argininosuccinate lyase family signature 291 307 3.7E-68 T 11-10-2018 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 PRINTS PR00145 Argininosuccinate lyase family signature 117 139 3.7E-68 T 11-10-2018 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 PRINTS PR00145 Argininosuccinate lyase family signature 326 345 3.7E-68 T 11-10-2018 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 Gene3D G3DSA:1.10.40.30 376 449 5.0E-193 T 11-10-2018 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.8E-31 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 2.8E-31 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 PRINTS PR00149 Fumarate lyase superfamily signature 118 136 2.8E-31 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 PRINTS PR00149 Fumarate lyase superfamily signature 247 274 2.8E-31 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 Hamap MF_00006 Argininosuccinate lyase [argH]. 18 470 44.343 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 Pfam PF00206 Lyase 22 316 4.7E-80 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 TIGRFAM TIGR00838 argH: argininosuccinate lyase 19 472 4.2E-195 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 SUPERFAMILY SSF48557 19 472 9.58E-156 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 Gene3D G3DSA:1.20.200.10 135 465 5.0E-193 T 11-10-2018 AYJ52_06515 e32c8b0b14f61a184272fd03acc43699 477 Gene3D G3DSA:1.10.275.10 41 245 5.0E-193 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AYJ52_04515 7da6bfa5643d3474e14da47e865fbe29 266 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 73 81 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_04515 7da6bfa5643d3474e14da47e865fbe29 266 Hamap MF_00258 Glutamate racemase [murI]. 6 258 32.755 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_04515 7da6bfa5643d3474e14da47e865fbe29 266 Gene3D G3DSA:3.40.50.1860 98 209 5.1E-79 T 11-10-2018 AYJ52_04515 7da6bfa5643d3474e14da47e865fbe29 266 SUPERFAMILY SSF53681 111 261 2.94E-33 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_04515 7da6bfa5643d3474e14da47e865fbe29 266 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 182 192 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_04515 7da6bfa5643d3474e14da47e865fbe29 266 Gene3D G3DSA:3.40.50.1860 7 243 5.1E-79 T 11-10-2018 AYJ52_04515 7da6bfa5643d3474e14da47e865fbe29 266 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 217 1.4E-33 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_04515 7da6bfa5643d3474e14da47e865fbe29 266 TIGRFAM TIGR00067 glut_race: glutamate racemase 8 238 1.7E-63 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_04515 7da6bfa5643d3474e14da47e865fbe29 266 SUPERFAMILY SSF53681 7 109 1.21E-30 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_00425 39c20bc8a5b49fbd3b19033d8c5b2c01 399 Pfam PF02321 Outer membrane efflux protein 234 364 2.1E-7 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_00425 39c20bc8a5b49fbd3b19033d8c5b2c01 399 Gene3D G3DSA:1.20.1600.10 19 392 1.9E-23 T 11-10-2018 AYJ52_00425 39c20bc8a5b49fbd3b19033d8c5b2c01 399 SUPERFAMILY SSF56954 3 389 4.71E-33 T 11-10-2018 AYJ52_11805 e6335910104015b8212bb2bfc8405756 201 Gene3D G3DSA:3.30.420.10 33 186 1.8E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_11805 e6335910104015b8212bb2bfc8405756 201 Pfam PF00665 Integrase core domain 38 153 2.9E-26 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_11805 e6335910104015b8212bb2bfc8405756 201 SUPERFAMILY SSF53098 33 192 3.34E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_02250 117c1619c091f7545da15c0a2e476598 144 PIRSF PIRSF005276 5 144 8.2E-54 T 11-10-2018 IPR007481 Stringent starvation protein B AYJ52_02250 117c1619c091f7545da15c0a2e476598 144 Gene3D G3DSA:2.30.30.220 4 133 1.7E-52 T 11-10-2018 IPR036760 SspB-like superfamily AYJ52_02250 117c1619c091f7545da15c0a2e476598 144 Pfam PF04386 Stringent starvation protein B 11 135 1.9E-36 T 11-10-2018 IPR007481 Stringent starvation protein B AYJ52_02250 117c1619c091f7545da15c0a2e476598 144 SUPERFAMILY SSF101738 7 116 4.32E-48 T 11-10-2018 IPR036760 SspB-like superfamily AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 307 8.0E-19 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 Gene3D G3DSA:3.40.50.970 1 180 1.2E-70 T 11-10-2018 AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 SUPERFAMILY SSF52518 5 179 9.97E-39 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 Gene3D G3DSA:3.40.50.970 350 543 1.4E-57 T 11-10-2018 AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 175 1.3E-31 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 PIRSF PIRSF036565 1 549 1.5E-192 T 11-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 Gene3D G3DSA:3.40.50.1220 188 344 4.8E-38 T 11-10-2018 AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 SUPERFAMILY SSF52467 180 338 2.45E-26 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 526 1.4E-18 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AYJ52_18275 d014669a49a4ad3aee7dc76d86bdd5c6 573 SUPERFAMILY SSF52518 359 543 2.56E-42 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_10265 b847abf9e86e8af77bcae1a214314e90 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 3.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_10265 b847abf9e86e8af77bcae1a214314e90 301 Pfam PF03466 LysR substrate binding domain 98 299 1.9E-28 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_10265 b847abf9e86e8af77bcae1a214314e90 301 SUPERFAMILY SSF53850 98 300 1.41E-29 T 11-10-2018 AYJ52_10265 b847abf9e86e8af77bcae1a214314e90 301 Gene3D G3DSA:1.10.10.10 11 100 1.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10265 b847abf9e86e8af77bcae1a214314e90 301 SUPERFAMILY SSF46785 9 120 2.52E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_10265 b847abf9e86e8af77bcae1a214314e90 301 Gene3D G3DSA:3.40.190.10 109 295 6.4E-42 T 11-10-2018 AYJ52_10265 b847abf9e86e8af77bcae1a214314e90 301 Gene3D G3DSA:3.40.190.10 169 267 6.4E-42 T 11-10-2018 AYJ52_10265 b847abf9e86e8af77bcae1a214314e90 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 3.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_10265 b847abf9e86e8af77bcae1a214314e90 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 3.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_10265 b847abf9e86e8af77bcae1a214314e90 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 3.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_11385 5b881f4be47935e16829a2c3cad1789e 88 Gene3D G3DSA:3.90.56.10 1 88 1.5E-34 T 11-10-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 AYJ52_11385 5b881f4be47935e16829a2c3cad1789e 88 ProDom PD004249 MONOOXYGENASE COMPONENT HYDROXYLASE MMOB/DMPM PHENOL SUBUNIT 3D-STRUCTURE HYDROCARBONS IRON PHENOLHYDROXYLASE 8 86 2.0E-39 T 11-10-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 AYJ52_11385 5b881f4be47935e16829a2c3cad1789e 88 SUPERFAMILY SSF56029 3 88 9.55E-31 T 11-10-2018 IPR036889 Monooxygenase component MmoB/DmpM superfamily GO:0004497|GO:0006725 AYJ52_11385 5b881f4be47935e16829a2c3cad1789e 88 Pfam PF02406 MmoB/DmpM family 3 86 4.1E-29 T 11-10-2018 IPR003454 Monooxygenase component MmoB/DmpM GO:0004497|GO:0006725 AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 367 2.7E-195 T 11-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 33.288 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 SMART SM00859 2 122 3.8E-27 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 Gene3D G3DSA:3.30.360.10 139 350 1.4E-80 T 11-10-2018 AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 121 9.4E-24 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 147 353 2.8E-56 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 PIRSF PIRSF000148 1 371 4.5E-66 T 11-10-2018 AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 Gene3D G3DSA:3.40.50.720 1 138 3.0E-59 T 11-10-2018 AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 SUPERFAMILY SSF51735 1 147 2.37E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_07365 55be7d5513d51e41d9276540021ddfc8 372 SUPERFAMILY SSF55347 134 354 3.27E-76 T 11-10-2018 AYJ52_03525 17d6a51e9423957443ebc27a8614e3f9 243 Gene3D G3DSA:3.20.20.70 2 242 1.0E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_03525 17d6a51e9423957443ebc27a8614e3f9 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 35.823 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AYJ52_03525 17d6a51e9423957443ebc27a8614e3f9 243 Pfam PF00977 Histidine biosynthesis protein 3 229 1.1E-78 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AYJ52_03525 17d6a51e9423957443ebc27a8614e3f9 243 SUPERFAMILY SSF51366 1 235 1.57E-74 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AYJ52_03525 17d6a51e9423957443ebc27a8614e3f9 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 2.1E-79 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AYJ52_04995 a03f82a11f91f0ce0d0008f3db169bb5 198 Pfam PF01569 PAP2 superfamily 91 170 6.6E-11 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AYJ52_04995 a03f82a11f91f0ce0d0008f3db169bb5 198 SMART SM00014 58 166 1.7E-10 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AYJ52_04995 a03f82a11f91f0ce0d0008f3db169bb5 198 Gene3D G3DSA:1.20.144.10 91 190 7.3E-15 T 11-10-2018 AYJ52_04995 a03f82a11f91f0ce0d0008f3db169bb5 198 SUPERFAMILY SSF48317 5 172 1.57E-25 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AYJ52_13650 4c8fe10b977876a3ddc2118ef64ad324 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 88 2.0E-34 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_13650 4c8fe10b977876a3ddc2118ef64ad324 88 Pfam PF01649 Ribosomal protein S20 2 84 2.5E-26 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_13650 4c8fe10b977876a3ddc2118ef64ad324 88 SUPERFAMILY SSF46992 3 86 5.89E-31 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_13650 4c8fe10b977876a3ddc2118ef64ad324 88 Gene3D G3DSA:1.20.58.110 1 87 8.8E-28 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_13650 4c8fe10b977876a3ddc2118ef64ad324 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 1.4E-26 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_13650 4c8fe10b977876a3ddc2118ef64ad324 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.453 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07130 0498ed38155d75228ebbf4bccf5a93e0 214 Gene3D G3DSA:3.60.15.10 2 210 8.7E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_07130 0498ed38155d75228ebbf4bccf5a93e0 214 SUPERFAMILY SSF56281 3 209 1.83E-56 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_07130 0498ed38155d75228ebbf4bccf5a93e0 214 SMART SM00849 13 193 1.6E-41 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_07130 0498ed38155d75228ebbf4bccf5a93e0 214 Pfam PF00753 Metallo-beta-lactamase superfamily 11 193 5.2E-30 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_12990 4c81b20ec055ff80967d0337defee664 235 Gene3D G3DSA:1.10.10.10 153 232 1.7E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12990 4c81b20ec055ff80967d0337defee664 235 SMART SM00419 173 223 8.0E-5 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AYJ52_12990 4c81b20ec055ff80967d0337defee664 235 SUPERFAMILY SSF46785 154 231 3.58E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12990 4c81b20ec055ff80967d0337defee664 235 Pfam PF00027 Cyclic nucleotide-binding domain 38 125 1.6E-16 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AYJ52_12990 4c81b20ec055ff80967d0337defee664 235 Gene3D G3DSA:2.60.120.10 10 146 6.5E-25 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_12990 4c81b20ec055ff80967d0337defee664 235 SUPERFAMILY SSF51206 13 143 6.02E-31 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AYJ52_12990 4c81b20ec055ff80967d0337defee664 235 Pfam PF13545 Crp-like helix-turn-helix domain 157 228 2.1E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AYJ52_12990 4c81b20ec055ff80967d0337defee664 235 SMART SM00100 19 140 2.0E-5 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AYJ52_11795 930ec461ce28c71e49caf5a94533db00 69 Pfam PF00313 'Cold-shock' DNA-binding domain 7 67 1.0E-25 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_11795 930ec461ce28c71e49caf5a94533db00 69 Gene3D G3DSA:2.40.50.140 6 67 4.3E-26 T 11-10-2018 AYJ52_11795 930ec461ce28c71e49caf5a94533db00 69 SUPERFAMILY SSF50249 5 67 5.39E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_11795 930ec461ce28c71e49caf5a94533db00 69 PIRSF PIRSF002599 1 69 4.0E-22 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AYJ52_11795 930ec461ce28c71e49caf5a94533db00 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-10-2018 IPR019844 Cold-shock conserved site AYJ52_11795 930ec461ce28c71e49caf5a94533db00 69 PRINTS PR00050 Cold shock protein signature 27 36 7.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_11795 930ec461ce28c71e49caf5a94533db00 69 PRINTS PR00050 Cold shock protein signature 42 60 7.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_11795 930ec461ce28c71e49caf5a94533db00 69 PRINTS PR00050 Cold shock protein signature 7 22 7.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_11795 930ec461ce28c71e49caf5a94533db00 69 SMART SM00357 6 69 2.5E-21 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AYJ52_16385 bbe2ba3d1012c01f3811091bc0caa7fe 271 Gene3D G3DSA:3.40.50.11240 69 252 5.4E-61 T 11-10-2018 AYJ52_16385 bbe2ba3d1012c01f3811091bc0caa7fe 271 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 15 253 8.7E-88 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AYJ52_16385 bbe2ba3d1012c01f3811091bc0caa7fe 271 Gene3D G3DSA:1.10.30.40 1 61 6.1E-13 T 11-10-2018 AYJ52_16385 bbe2ba3d1012c01f3811091bc0caa7fe 271 PIRSF PIRSF018982 1 262 9.5E-91 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AYJ52_17430 e29f592028a2696b9704210f8a6de084 289 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 289 9.9E-75 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AYJ52_17430 e29f592028a2696b9704210f8a6de084 289 Gene3D G3DSA:3.10.310.10 126 281 1.4E-88 T 11-10-2018 AYJ52_17430 e29f592028a2696b9704210f8a6de084 289 SUPERFAMILY SSF54506 5 288 2.04E-73 T 11-10-2018 AYJ52_17430 e29f592028a2696b9704210f8a6de084 289 Gene3D G3DSA:3.10.310.10 7 283 1.4E-88 T 11-10-2018 AYJ52_17430 e29f592028a2696b9704210f8a6de084 289 PIRSF PIRSF016184 1 289 3.6E-81 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AYJ52_17430 e29f592028a2696b9704210f8a6de084 289 Pfam PF02567 Phenazine biosynthesis-like protein 9 285 4.9E-67 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AYJ52_15465 a20b248dc271cd79894ae97a7cf69834 77 Gene3D G3DSA:1.25.40.10 4 77 3.0E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_15465 a20b248dc271cd79894ae97a7cf69834 77 SUPERFAMILY SSF81901 20 74 1.44E-7 T 11-10-2018 AYJ52_05285 beaa1cea935ccd504c0cbccf7005caeb 727 Gene3D G3DSA:3.40.50.300 451 725 2.2E-78 T 11-10-2018 AYJ52_05285 beaa1cea935ccd504c0cbccf7005caeb 727 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 514 717 6.9E-52 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AYJ52_05285 beaa1cea935ccd504c0cbccf7005caeb 727 Pfam PF13807 G-rich domain on putative tyrosine kinase 377 458 4.7E-31 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain AYJ52_05285 beaa1cea935ccd504c0cbccf7005caeb 727 Pfam PF13614 AAA domain 544 691 5.5E-15 T 11-10-2018 IPR025669 AAA domain AYJ52_05285 beaa1cea935ccd504c0cbccf7005caeb 727 SUPERFAMILY SSF52540 532 712 2.94E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_05285 beaa1cea935ccd504c0cbccf7005caeb 727 Pfam PF02706 Chain length determinant protein 9 101 3.3E-21 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AYJ52_05295 4acadab7f8c5137e84f1793457b4a2cc 366 Gene3D G3DSA:3.10.560.10 48 336 2.3E-82 T 11-10-2018 AYJ52_05295 4acadab7f8c5137e84f1793457b4a2cc 366 Gene3D G3DSA:3.10.560.10 60 251 2.3E-82 T 11-10-2018 AYJ52_05295 4acadab7f8c5137e84f1793457b4a2cc 366 Pfam PF02563 Polysaccharide biosynthesis/export protein 74 162 5.8E-23 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AYJ52_05295 4acadab7f8c5137e84f1793457b4a2cc 366 Gene3D G3DSA:3.30.1950.10 82 166 2.3E-82 T 11-10-2018 AYJ52_14995 d12eb73a02d7416c84e434625680b801 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 3.0E-27 T 11-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AYJ52_14995 d12eb73a02d7416c84e434625680b801 96 PIRSF PIRSF001486 1 94 1.3E-49 T 11-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AYJ52_14995 d12eb73a02d7416c84e434625680b801 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 3.4E-49 T 11-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AYJ52_14995 d12eb73a02d7416c84e434625680b801 96 SUPERFAMILY SSF54909 1 95 9.12E-40 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_14995 d12eb73a02d7416c84e434625680b801 96 Gene3D G3DSA:3.30.70.1060 1 94 6.3E-37 T 11-10-2018 AYJ52_14995 d12eb73a02d7416c84e434625680b801 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 7.4E-42 T 11-10-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AYJ52_07110 8dc0998b6113da0db925a1ac3366bd04 203 Pfam PF06938 Protein of unknown function (DUF1285) 56 196 1.8E-45 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 AYJ52_07110 8dc0998b6113da0db925a1ac3366bd04 203 Gene3D G3DSA:3.10.540.10 16 106 1.6E-31 T 11-10-2018 AYJ52_07110 8dc0998b6113da0db925a1ac3366bd04 203 PIRSF PIRSF029557 11 202 2.6E-41 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 AYJ52_07110 8dc0998b6113da0db925a1ac3366bd04 203 Gene3D G3DSA:2.30.270.10 107 174 2.6E-14 T 11-10-2018 IPR023361 DUF1285, beta-roll domain superfamily AYJ52_17585 95b6004920690f12264f56a3749f8885 250 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 228 2.0E-103 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 SUPERFAMILY SSF52313 8 234 1.07E-93 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AYJ52_17585 95b6004920690f12264f56a3749f8885 250 Gene3D G3DSA:1.10.287.610 105 152 3.0E-92 T 11-10-2018 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 Pfam PF00318 Ribosomal protein S2 11 226 3.5E-94 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 PRINTS PR00395 Ribosomal protein S2 signature 160 177 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 PRINTS PR00395 Ribosomal protein S2 signature 39 48 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 PRINTS PR00395 Ribosomal protein S2 signature 89 106 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 PRINTS PR00395 Ribosomal protein S2 signature 8 26 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 PRINTS PR00395 Ribosomal protein S2 signature 198 212 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 PRINTS PR00395 Ribosomal protein S2 signature 177 188 6.8E-36 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 41.06 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AYJ52_17585 95b6004920690f12264f56a3749f8885 250 Gene3D G3DSA:3.40.50.10490 11 221 3.0E-92 T 11-10-2018 AYJ52_15960 59ed6f804251673fa29f41e5aadab1f4 363 Gene3D G3DSA:1.20.1250.20 168 361 3.5E-36 T 11-10-2018 AYJ52_15960 59ed6f804251673fa29f41e5aadab1f4 363 SUPERFAMILY SSF103473 2 357 2.49E-44 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_15960 59ed6f804251673fa29f41e5aadab1f4 363 Gene3D G3DSA:1.20.1250.20 1 167 9.6E-20 T 11-10-2018 AYJ52_15960 59ed6f804251673fa29f41e5aadab1f4 363 Pfam PF12832 MFS_1 like family 1 338 2.6E-77 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain AYJ52_15960 59ed6f804251673fa29f41e5aadab1f4 363 PIRSF PIRSF004925 1 363 2.2E-99 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 Gene3D G3DSA:3.50.50.60 13 404 1.1E-148 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 523 5.5E-14 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 11 520 1.2E-190 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 PIRSF PIRSF000171 1 288 1.2E-17 T 11-10-2018 AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 PIRSF PIRSF000171 337 535 1.3E-15 T 11-10-2018 AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 Gene3D G3DSA:3.90.700.10 248 358 1.1E-148 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 SUPERFAMILY SSF51905 3 447 2.29E-67 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 SUPERFAMILY SSF46977 426 525 9.03E-32 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 7.6E-8 T 11-10-2018 AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 7.6E-8 T 11-10-2018 AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 SUPERFAMILY SSF56425 238 353 6.58E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 Pfam PF00890 FAD binding domain 13 392 2.2E-91 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_18645 6c7761ff93ebf0a7ab1a29232eb0ec10 547 Gene3D G3DSA:1.20.58.100 425 540 6.2E-44 T 11-10-2018 AYJ52_15280 36a070ef6359181412bc9120ab59cf32 545 Pfam PF00117 Glutamine amidotransferase class-I 302 536 8.9E-60 T 11-10-2018 IPR017926 Glutamine amidotransferase AYJ52_15280 36a070ef6359181412bc9120ab59cf32 545 SUPERFAMILY SSF52540 1 267 9.3E-115 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_15280 36a070ef6359181412bc9120ab59cf32 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 3.2E-242 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AYJ52_15280 36a070ef6359181412bc9120ab59cf32 545 Pfam PF06418 CTP synthase N-terminus 4 264 1.1E-118 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AYJ52_15280 36a070ef6359181412bc9120ab59cf32 545 SUPERFAMILY SSF52317 290 542 1.43E-83 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_15280 36a070ef6359181412bc9120ab59cf32 545 Gene3D G3DSA:3.40.50.880 287 545 2.8E-101 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_15280 36a070ef6359181412bc9120ab59cf32 545 Hamap MF_01227 CTP synthase [pyrG]. 2 541 49.262 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AYJ52_15280 36a070ef6359181412bc9120ab59cf32 545 Gene3D G3DSA:3.40.50.300 1 285 6.7E-123 T 11-10-2018 AYJ52_18690 a762525c7948f882ca9b112f31baddfd 353 SMART SM00382 27 214 9.2E-21 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_18690 a762525c7948f882ca9b112f31baddfd 353 SUPERFAMILY SSF52540 3 244 1.01E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18690 a762525c7948f882ca9b112f31baddfd 353 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 1.3E-121 T 11-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 AYJ52_18690 a762525c7948f882ca9b112f31baddfd 353 SUPERFAMILY SSF50331 240 348 1.53E-7 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AYJ52_18690 a762525c7948f882ca9b112f31baddfd 353 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_18690 a762525c7948f882ca9b112f31baddfd 353 Pfam PF12857 TOBE-like domain 287 341 1.5E-7 T 11-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 AYJ52_18690 a762525c7948f882ca9b112f31baddfd 353 Pfam PF00005 ABC transporter 18 164 8.3E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_18690 a762525c7948f882ca9b112f31baddfd 353 Gene3D G3DSA:3.40.50.300 2 312 4.7E-82 T 11-10-2018 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 Gene3D G3DSA:3.10.50.30 77 159 2.2E-30 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 PIRSF PIRSF006092 1 158 1.9E-44 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.973 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 SUPERFAMILY SSF54534 80 156 1.31E-20 T 11-10-2018 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 5.2E-23 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 7.2E-24 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 50.707 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 Gene3D G3DSA:1.10.287.180 1 76 5.0E-29 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 3 156 2.7E-72 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AYJ52_00285 8ca4c1f592414cc2be4788d11391f641 164 SUPERFAMILY SSF46557 3 78 2.09E-25 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 SUPERFAMILY SSF56719 407 817 2.43E-87 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 Pfam PF00204 DNA gyrase B 234 403 7.7E-62 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR01159 DNA gyrase subunit B signature 194 209 1.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR01159 DNA gyrase subunit B signature 776 788 1.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR01159 DNA gyrase subunit B signature 325 341 1.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR01159 DNA gyrase subunit B signature 19 29 1.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR01159 DNA gyrase subunit B signature 483 492 1.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR01159 DNA gyrase subunit B signature 233 255 1.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR01159 DNA gyrase subunit B signature 792 808 1.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR01159 DNA gyrase subunit B signature 209 222 1.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR01159 DNA gyrase subunit B signature 387 407 1.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR01159 DNA gyrase subunit B signature 373 387 1.8E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 752 812 2.5E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 Gene3D G3DSA:3.30.565.10 15 232 5.3E-90 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 SUPERFAMILY SSF54211 234 405 9.48E-60 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 SMART SM00387 45 189 7.5E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 46 186 4.0E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 Gene3D G3DSA:3.30.230.10 233 411 1.4E-72 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 Gene3D G3DSA:3.40.50.670 412 601 2.5E-71 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 19 818 9.3E-301 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 Gene3D G3DSA:3.40.50.670 723 821 1.4E-26 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 822 100.813 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 Pfam PF01751 Toprim domain 432 544 1.2E-17 T 11-10-2018 IPR006171 TOPRIM domain AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 SMART SM00433 49 816 1.7E-267 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 Gene3D G3DSA:3.10.20.690 605 702 4.0E-6 T 11-10-2018 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 SUPERFAMILY SSF55874 19 231 1.23E-72 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR00418 DNA topoisomerase II family signature 518 535 1.8E-71 T 11-10-2018 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR00418 DNA topoisomerase II family signature 433 447 1.8E-71 T 11-10-2018 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR00418 DNA topoisomerase II family signature 500 516 1.8E-71 T 11-10-2018 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR00418 DNA topoisomerase II family signature 755 771 1.8E-71 T 11-10-2018 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR00418 DNA topoisomerase II family signature 49 64 1.8E-71 T 11-10-2018 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR00418 DNA topoisomerase II family signature 84 97 1.8E-71 T 11-10-2018 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR00418 DNA topoisomerase II family signature 281 294 1.8E-71 T 11-10-2018 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR00418 DNA topoisomerase II family signature 538 550 1.8E-71 T 11-10-2018 AYJ52_04900 65834c379913b4fd2d534dcef7cac258 822 PRINTS PR00418 DNA topoisomerase II family signature 127 141 1.8E-71 T 11-10-2018 AYJ52_15745 97a084acc30291fb1e7b2aa03205e94e 414 Gene3D G3DSA:3.50.50.60 4 51 4.5E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15745 97a084acc30291fb1e7b2aa03205e94e 414 Gene3D G3DSA:3.50.50.60 107 405 8.0E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15745 97a084acc30291fb1e7b2aa03205e94e 414 SUPERFAMILY SSF54373 277 369 7.98E-10 T 11-10-2018 AYJ52_15745 97a084acc30291fb1e7b2aa03205e94e 414 Pfam PF01266 FAD dependent oxidoreductase 3 404 1.7E-54 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AYJ52_15745 97a084acc30291fb1e7b2aa03205e94e 414 SUPERFAMILY SSF51905 1 412 8.55E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15745 97a084acc30291fb1e7b2aa03205e94e 414 Gene3D G3DSA:3.30.9.10 133 368 8.0E-35 T 11-10-2018 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 SUPERFAMILY SSF56059 99 304 1.77E-55 T 11-10-2018 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 66 77 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 Gene3D G3DSA:3.40.50.20 1 87 4.4E-33 T 11-10-2018 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 Pfam PF01820 D-ala D-ala ligase N-terminus 9 88 1.3E-16 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 PIRSF PIRSF039102 5 50 7.8E-8 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 PIRSF PIRSF039102 41 308 9.5E-80 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 SUPERFAMILY SSF52440 9 99 3.17E-26 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 Gene3D G3DSA:3.30.470.20 89 289 2.0E-82 T 11-10-2018 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 Pfam PF07478 D-ala D-ala ligase C-terminus 106 300 3.3E-54 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 8 304 34.015 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 246 274 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_04135 7fa3f3b44e64c0a963ebc26503b486d3 308 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 9 303 5.4E-99 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_15990 125def06d07594ea57cba8e0a0259b32 557 SUPERFAMILY SSF51395 36 526 7.85E-133 T 11-10-2018 AYJ52_15990 125def06d07594ea57cba8e0a0259b32 557 Pfam PF01645 Conserved region in glutamate synthase 182 497 1.2E-88 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AYJ52_15990 125def06d07594ea57cba8e0a0259b32 557 PIRSF PIRSF500060 35 557 6.1E-230 T 11-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria AYJ52_15990 125def06d07594ea57cba8e0a0259b32 557 Gene3D G3DSA:3.20.20.70 121 530 9.6E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_15990 125def06d07594ea57cba8e0a0259b32 557 PIRSF PIRSF006429 32 557 1.9E-162 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein AYJ52_01050 08371d8292ab4d66f9b585dd58ec3f76 284 Gene3D G3DSA:3.30.479.30 49 181 8.3E-38 T 11-10-2018 AYJ52_01050 08371d8292ab4d66f9b585dd58ec3f76 284 SMART SM00244 21 179 2.6E-54 T 11-10-2018 IPR001107 Band 7 domain AYJ52_01050 08371d8292ab4d66f9b585dd58ec3f76 284 Pfam PF01145 SPFH domain / Band 7 family 25 195 9.1E-36 T 11-10-2018 IPR001107 Band 7 domain AYJ52_01050 08371d8292ab4d66f9b585dd58ec3f76 284 PRINTS PR00721 Stomatin signature 155 173 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AYJ52_01050 08371d8292ab4d66f9b585dd58ec3f76 284 PRINTS PR00721 Stomatin signature 131 154 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AYJ52_01050 08371d8292ab4d66f9b585dd58ec3f76 284 PRINTS PR00721 Stomatin signature 28 50 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AYJ52_01050 08371d8292ab4d66f9b585dd58ec3f76 284 PRINTS PR00721 Stomatin signature 76 97 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AYJ52_01050 08371d8292ab4d66f9b585dd58ec3f76 284 PRINTS PR00721 Stomatin signature 111 128 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AYJ52_01050 08371d8292ab4d66f9b585dd58ec3f76 284 PRINTS PR00721 Stomatin signature 174 195 5.7E-25 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AYJ52_01050 08371d8292ab4d66f9b585dd58ec3f76 284 SUPERFAMILY SSF117892 52 186 1.27E-37 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AYJ52_03380 640388d9d2e0026e2cd73c0780670d8f 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 73 390 8.3E-40 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_03380 640388d9d2e0026e2cd73c0780670d8f 402 SUPERFAMILY SSF111369 99 316 6.02E-20 T 11-10-2018 AYJ52_03380 640388d9d2e0026e2cd73c0780670d8f 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 83 310 2.4E-30 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_03380 640388d9d2e0026e2cd73c0780670d8f 402 Gene3D G3DSA:2.40.420.20 74 380 6.4E-61 T 11-10-2018 AYJ52_03380 640388d9d2e0026e2cd73c0780670d8f 402 Gene3D G3DSA:2.40.50.100 100 239 6.4E-61 T 11-10-2018 AYJ52_03380 640388d9d2e0026e2cd73c0780670d8f 402 Gene3D G3DSA:1.10.287.470 134 203 6.4E-61 T 11-10-2018 AYJ52_03380 640388d9d2e0026e2cd73c0780670d8f 402 Gene3D G3DSA:2.40.30.170 86 318 6.4E-61 T 11-10-2018 AYJ52_03230 fec636b46741bb95b59e8a32f7b7562f 289 Gene3D G3DSA:3.30.70.1070 81 181 1.3E-9 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AYJ52_09435 8a2b43dde573d696c44894c82d135cf1 307 SUPERFAMILY SSF55174 5 97 1.03E-17 T 11-10-2018 AYJ52_09435 8a2b43dde573d696c44894c82d135cf1 307 Gene3D G3DSA:3.10.290.10 1 58 3.1E-19 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AYJ52_09435 8a2b43dde573d696c44894c82d135cf1 307 Pfam PF01479 S4 domain 4 48 1.4E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_09435 8a2b43dde573d696c44894c82d135cf1 307 Pfam PF00849 RNA pseudouridylate synthase 67 199 1.4E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_09435 8a2b43dde573d696c44894c82d135cf1 307 Gene3D G3DSA:3.30.70.580 68 235 1.4E-48 T 11-10-2018 AYJ52_09435 8a2b43dde573d696c44894c82d135cf1 307 SMART SM00363 3 64 6.2E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_09435 8a2b43dde573d696c44894c82d135cf1 307 Gene3D G3DSA:3.30.70.1560 134 217 1.4E-48 T 11-10-2018 AYJ52_09435 8a2b43dde573d696c44894c82d135cf1 307 SUPERFAMILY SSF55120 66 235 1.3E-40 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_09435 8a2b43dde573d696c44894c82d135cf1 307 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AYJ52_09435 8a2b43dde573d696c44894c82d135cf1 307 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 4.3E-52 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 651 4.4E-204 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 Gene3D G3DSA:1.10.730.20 652 936 3.7E-89 T 11-10-2018 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 SUPERFAMILY SSF47323 664 932 1.23E-73 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 SUPERFAMILY SSF52374 11 660 6.12E-139 T 11-10-2018 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 SUPERFAMILY SSF50677 213 415 1.26E-51 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 Pfam PF06827 Zinc finger found in FPG and IleRS 905 932 7.7E-7 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 4.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 573 582 4.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 60 71 4.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 539 552 4.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 413 428 4.3E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 67 78 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 Gene3D G3DSA:3.90.740.10 204 420 1.7E-232 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 11 936 21.016 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 Pfam PF08264 Anticodon-binding domain of tRNA 697 852 3.8E-27 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 Gene3D G3DSA:3.40.50.620 35 641 1.7E-232 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_05145 c4cc52ff55439533386ab20f15dd05fe 945 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 24 852 9.0E-278 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AYJ52_01735 07acea419323172263aff97aac3bb614 139 SUPERFAMILY SSF55729 10 139 1.77E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_01735 07acea419323172263aff97aac3bb614 139 Gene3D G3DSA:3.40.630.30 9 139 1.1E-37 T 11-10-2018 AYJ52_01735 07acea419323172263aff97aac3bb614 139 Pfam PF13673 Acetyltransferase (GNAT) domain 31 138 9.6E-21 T 11-10-2018 IPR000182 GNAT domain AYJ52_03210 55493be202d94cbe5dc5caf04e4529c5 196 Gene3D G3DSA:1.20.1440.20 19 195 2.8E-64 T 11-10-2018 IPR023353 LemA-like domain superfamily AYJ52_03210 55493be202d94cbe5dc5caf04e4529c5 196 Pfam PF04011 LemA family 15 195 6.9E-67 T 11-10-2018 IPR007156 LemA AYJ52_03210 55493be202d94cbe5dc5caf04e4529c5 196 SUPERFAMILY SSF140478 27 184 1.96E-52 T 11-10-2018 IPR023353 LemA-like domain superfamily AYJ52_06010 c9113f0bdaed98079ff94118038fd7ce 166 Pfam PF10881 Protein of unknown function (DUF2726) 34 140 3.4E-10 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 AYJ52_15315 075a246dabc21de4f5f0319ceb6fa8b8 186 SUPERFAMILY SSF46785 3 177 3.86E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_15315 075a246dabc21de4f5f0319ceb6fa8b8 186 Gene3D G3DSA:1.10.10.10 1 87 8.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15315 075a246dabc21de4f5f0319ceb6fa8b8 186 Pfam PF10400 Virulence activator alpha C-term 91 175 8.2E-19 T 11-10-2018 IPR018309 Transcription regulator PadR, C-terminal AYJ52_15315 075a246dabc21de4f5f0319ceb6fa8b8 186 Pfam PF03551 Transcriptional regulator PadR-like family 7 79 8.9E-10 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal AYJ52_12015 48159c1fecd28a94c4aa3aa7a16f9eb4 158 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 13 152 3.3E-32 T 11-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein AYJ52_12015 48159c1fecd28a94c4aa3aa7a16f9eb4 158 SUPERFAMILY SSF160719 31 147 2.75E-11 T 11-10-2018 AYJ52_12015 48159c1fecd28a94c4aa3aa7a16f9eb4 158 Pfam PF04965 Gene 25-like lysozyme 34 133 3.0E-17 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AYJ52_17020 5a995d5d50f19c7ceaa163a0b9ff7a08 561 Pfam PF02080 TrkA-C domain 307 373 1.3E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AYJ52_17020 5a995d5d50f19c7ceaa163a0b9ff7a08 561 Gene3D G3DSA:3.30.70.1450 222 293 1.6E-5 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AYJ52_17020 5a995d5d50f19c7ceaa163a0b9ff7a08 561 SUPERFAMILY SSF116726 305 375 1.57E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AYJ52_17020 5a995d5d50f19c7ceaa163a0b9ff7a08 561 Pfam PF06826 Predicted Permease Membrane Region 391 558 8.7E-35 T 11-10-2018 IPR006512 YidE/YbjL duplication AYJ52_17020 5a995d5d50f19c7ceaa163a0b9ff7a08 561 Pfam PF06826 Predicted Permease Membrane Region 17 180 6.2E-33 T 11-10-2018 IPR006512 YidE/YbjL duplication AYJ52_17020 5a995d5d50f19c7ceaa163a0b9ff7a08 561 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 3 560 3.3E-226 T 11-10-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 AYJ52_17020 5a995d5d50f19c7ceaa163a0b9ff7a08 561 Gene3D G3DSA:3.30.70.1450 305 380 4.6E-12 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AYJ52_17020 5a995d5d50f19c7ceaa163a0b9ff7a08 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 545 3.1E-24 T 11-10-2018 IPR006512 YidE/YbjL duplication AYJ52_17020 5a995d5d50f19c7ceaa163a0b9ff7a08 561 SUPERFAMILY SSF116726 229 288 1.27E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AYJ52_06215 fb8076d5f931423494443c342a705dbc 104 SMART SM00418 20 98 5.8E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_06215 fb8076d5f931423494443c342a705dbc 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 4.5E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_06215 fb8076d5f931423494443c342a705dbc 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 4.5E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_06215 fb8076d5f931423494443c342a705dbc 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 4.5E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_06215 fb8076d5f931423494443c342a705dbc 104 Gene3D G3DSA:1.10.10.10 2 104 1.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_06215 fb8076d5f931423494443c342a705dbc 104 Pfam PF01022 Bacterial regulatory protein, arsR family 28 72 6.1E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_06215 fb8076d5f931423494443c342a705dbc 104 SUPERFAMILY SSF46785 7 93 2.39E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.3E-73 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 SUPERFAMILY SSF52540 1 216 5.63E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 Pfam PF00406 Adenylate kinase 5 185 5.7E-55 T 11-10-2018 AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 5.0E-16 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 PRINTS PR00094 Adenylate kinase signature 32 46 3.4E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 PRINTS PR00094 Adenylate kinase signature 81 97 3.4E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 PRINTS PR00094 Adenylate kinase signature 4 17 3.4E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 PRINTS PR00094 Adenylate kinase signature 173 187 3.4E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 PRINTS PR00094 Adenylate kinase signature 156 171 3.4E-32 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 Hamap MF_00235 Adenylate kinase [adk]. 1 216 51.027 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AYJ52_10540 bf172b7b97e34fc03bc5e6027b7a90ba 217 Gene3D G3DSA:3.40.50.300 1 217 3.2E-81 T 11-10-2018 AYJ52_13265 5cc03a67d8aaa2cf3001c9dae6162d18 135 Pfam PF02566 OsmC-like protein 36 132 1.3E-21 T 11-10-2018 IPR003718 OsmC/Ohr family AYJ52_13265 5cc03a67d8aaa2cf3001c9dae6162d18 135 Gene3D G3DSA:3.30.300.20 1 135 2.7E-37 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_13265 5cc03a67d8aaa2cf3001c9dae6162d18 135 SUPERFAMILY SSF82784 4 133 2.62E-35 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AYJ52_15720 f50e761f7d1113875607930b64579ae3 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 4.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_15720 f50e761f7d1113875607930b64579ae3 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 4.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_15720 f50e761f7d1113875607930b64579ae3 217 SUPERFAMILY SSF46689 16 88 3.49E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_15720 f50e761f7d1113875607930b64579ae3 217 Gene3D G3DSA:1.10.357.10 82 215 2.1E-14 T 11-10-2018 AYJ52_15720 f50e761f7d1113875607930b64579ae3 217 Gene3D G3DSA:1.10.10.60 6 74 3.3E-28 T 11-10-2018 AYJ52_15720 f50e761f7d1113875607930b64579ae3 217 SUPERFAMILY SSF48498 96 214 1.56E-5 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_15720 f50e761f7d1113875607930b64579ae3 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 2.4E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 304 8.7E-118 T 11-10-2018 IPR017861 Kae1/TsaD family AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 Gene3D G3DSA:3.30.420.40 3 313 2.8E-126 T 11-10-2018 AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 SUPERFAMILY SSF53067 3 121 5.24E-30 T 11-10-2018 AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 SUPERFAMILY SSF53067 101 307 1.0E-43 T 11-10-2018 AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 312 9.0E-133 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 Gene3D G3DSA:3.30.420.40 129 291 2.8E-126 T 11-10-2018 AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 329 64.16 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 261 270 4.9E-49 T 11-10-2018 IPR017861 Kae1/TsaD family AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 4.9E-49 T 11-10-2018 IPR017861 Kae1/TsaD family AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 4.9E-49 T 11-10-2018 IPR017861 Kae1/TsaD family AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 4.9E-49 T 11-10-2018 IPR017861 Kae1/TsaD family AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.9E-49 T 11-10-2018 IPR017861 Kae1/TsaD family AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 4.9E-49 T 11-10-2018 IPR017861 Kae1/TsaD family AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 Pfam PF00814 Glycoprotease family 25 305 2.4E-102 T 11-10-2018 IPR000905 Gcp-like domain AYJ52_17160 97b67d2243529276821e82393c6e48fa 336 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 AYJ52_12305 666658279b6c2ab6e3518eaede846327 416 ProSitePatterns PS00216 Sugar transport proteins signature 1. 286 303 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_12305 666658279b6c2ab6e3518eaede846327 416 Gene3D G3DSA:1.20.1250.20 222 411 1.2E-29 T 11-10-2018 AYJ52_12305 666658279b6c2ab6e3518eaede846327 416 Gene3D G3DSA:1.20.1250.20 13 215 6.3E-39 T 11-10-2018 AYJ52_12305 666658279b6c2ab6e3518eaede846327 416 SUPERFAMILY SSF103473 14 409 5.49E-81 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_12305 666658279b6c2ab6e3518eaede846327 416 Pfam PF07690 Major Facilitator Superfamily 25 272 2.7E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_14870 0c23e8f124494bee13ccd61783af81b4 457 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 39 456 1.4E-7 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AYJ52_14870 0c23e8f124494bee13ccd61783af81b4 457 SUPERFAMILY SSF56935 20 457 1.65E-38 T 11-10-2018 AYJ52_14870 0c23e8f124494bee13ccd61783af81b4 457 Gene3D G3DSA:2.40.160.60 33 457 1.9E-18 T 11-10-2018 AYJ52_14685 08c555137d93a11dac38b7bf6f5d740c 233 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 230 5.8E-51 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AYJ52_14685 08c555137d93a11dac38b7bf6f5d740c 233 Gene3D G3DSA:3.90.850.10 1 233 4.4E-82 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AYJ52_14685 08c555137d93a11dac38b7bf6f5d740c 233 SUPERFAMILY SSF56529 22 232 3.14E-66 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AYJ52_15865 e67752bc6454de25097a25affd4b455d 209 Pfam PF12804 MobA-like NTP transferase domain 11 155 1.6E-22 T 11-10-2018 IPR025877 MobA-like NTP transferase AYJ52_15865 e67752bc6454de25097a25affd4b455d 209 SUPERFAMILY SSF53448 10 195 1.86E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_15865 e67752bc6454de25097a25affd4b455d 209 Gene3D G3DSA:3.90.550.10 7 204 1.2E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 SUPERFAMILY SSF56059 83 345 8.49E-67 T 11-10-2018 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 SUPERFAMILY SSF51246 329 442 6.28E-40 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 1.5E-207 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 Gene3D G3DSA:3.40.50.20 1 85 1.6E-34 T 11-10-2018 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 2.7E-36 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 SUPERFAMILY SSF52440 1 113 1.08E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 SMART SM00878 334 440 1.5E-58 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.8E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 320 8.1E-74 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 Gene3D G3DSA:3.30.1490.20 131 201 5.7E-145 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AYJ52_15950 671fe9437ba2b2de4648d29220d21ab2 455 Gene3D G3DSA:3.30.470.20 87 430 5.7E-145 T 11-10-2018 AYJ52_05555 fee7afe8e638c75ff67f75030986a78e 696 Pfam PF00593 TonB dependent receptor 231 695 1.2E-58 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_05555 fee7afe8e638c75ff67f75030986a78e 696 Gene3D G3DSA:2.170.130.10 39 169 8.0E-25 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_05555 fee7afe8e638c75ff67f75030986a78e 696 Gene3D G3DSA:2.40.170.20 170 696 1.7E-118 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_05555 fee7afe8e638c75ff67f75030986a78e 696 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 696 3.9E-106 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_05555 fee7afe8e638c75ff67f75030986a78e 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 159 2.9E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_05555 fee7afe8e638c75ff67f75030986a78e 696 SUPERFAMILY SSF56935 24 696 4.19E-125 T 11-10-2018 AYJ52_12630 08f1e80cd21bf57316b7d20866455754 169 Pfam PF00581 Rhodanese-like domain 48 145 3.8E-13 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_12630 08f1e80cd21bf57316b7d20866455754 169 SUPERFAMILY SSF52821 43 166 8.51E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_12630 08f1e80cd21bf57316b7d20866455754 169 Gene3D G3DSA:3.40.250.10 40 169 5.7E-35 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_12630 08f1e80cd21bf57316b7d20866455754 169 SMART SM00450 46 152 6.7E-14 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_11690 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_11690 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11690 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_11690 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_13000 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_13000 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_13000 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_13000 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_00125 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_00125 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_00125 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_00125 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_05130 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_05130 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_05130 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_05130 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_18865 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_18865 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_18865 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_18865 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_13200 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_13200 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_13200 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_13200 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_14500 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_14500 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14500 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_14500 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_15155 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_15155 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_15155 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_15155 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_15245 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_15245 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_15245 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_15245 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_15775 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_15775 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_15775 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_15775 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_01295 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_01295 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_01295 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_01295 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_16275 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_16275 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_16275 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_16275 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_18400 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF48295 2 57 7.32E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_18400 08fcf41a7449be8aea7a4e47845b1268 186 SUPERFAMILY SSF46689 59 168 1.06E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_18400 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 10 57 9.1E-7 T 11-10-2018 AYJ52_18400 08fcf41a7449be8aea7a4e47845b1268 186 Pfam PF13518 Helix-turn-helix domain 69 119 1.7E-9 T 11-10-2018 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 Gene3D G3DSA:3.40.50.720 11 203 4.8E-61 T 11-10-2018 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 204 225 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 SUPERFAMILY SSF48179 195 347 8.84E-50 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 21 338 33.572 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 Gene3D G3DSA:1.10.1040.10 205 351 1.1E-44 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 23 174 1.5E-49 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 PIRSF PIRSF000114 15 348 3.6E-103 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 196 334 7.4E-46 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 254 271 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 214 238 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 25 42 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 149 169 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 75 102 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 189 213 3.1E-38 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AYJ52_17225 514bce77003441e3a734fbce2d19986f 357 SUPERFAMILY SSF51735 22 192 1.32E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_13375 77ffc9a29c21a4fc738a934c8899787b 127 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 13 126 2.0E-49 T 11-10-2018 IPR018714 Protein of unknown function DUF2237 AYJ52_13375 77ffc9a29c21a4fc738a934c8899787b 127 Gene3D G3DSA:3.30.56.110 8 127 2.4E-49 T 11-10-2018 AYJ52_13515 e6f934936a2ac195d73f9d29dd9bd262 146 Gene3D G3DSA:3.30.530.20 3 145 3.3E-13 T 11-10-2018 IPR023393 START-like domain superfamily AYJ52_13515 e6f934936a2ac195d73f9d29dd9bd262 146 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 143 1.1E-6 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase AYJ52_13515 e6f934936a2ac195d73f9d29dd9bd262 146 SUPERFAMILY SSF55961 4 144 2.85E-15 T 11-10-2018 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 Gene3D G3DSA:3.90.190.20 318 454 3.7E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 SUPERFAMILY SSF51984 1 90 1.7E-21 T 11-10-2018 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 Pfam PF08245 Mur ligase middle domain 108 295 6.1E-22 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 Gene3D G3DSA:3.40.50.720 1 90 1.2E-33 T 11-10-2018 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 SUPERFAMILY SSF53244 314 452 3.14E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 SUPERFAMILY SSF53623 97 312 7.46E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 453 57.911 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 363 4.5E-11 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 453 2.9E-207 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 Pfam PF01225 Mur ligase family, catalytic domain 2 99 5.4E-17 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AYJ52_05005 1bdd57ec21a1fbecfad86bae8ca53c78 457 Gene3D G3DSA:3.40.1190.10 91 317 5.5E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_04470 80ff8180838b39386b42be00193da632 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 3.3E-254 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AYJ52_04470 80ff8180838b39386b42be00193da632 612 Gene3D G3DSA:3.40.50.10490 247 611 1.4E-144 T 11-10-2018 AYJ52_04470 80ff8180838b39386b42be00193da632 612 SUPERFAMILY SSF53697 244 612 1.58E-109 T 11-10-2018 AYJ52_04470 80ff8180838b39386b42be00193da632 612 Gene3D G3DSA:3.40.50.10490 450 597 1.4E-144 T 11-10-2018 AYJ52_04470 80ff8180838b39386b42be00193da632 612 Pfam PF13522 Glutamine amidotransferase domain 62 180 8.4E-22 T 11-10-2018 AYJ52_04470 80ff8180838b39386b42be00193da632 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 40.375 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AYJ52_04470 80ff8180838b39386b42be00193da632 612 SUPERFAMILY SSF56235 2 222 2.32E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_04470 80ff8180838b39386b42be00193da632 612 Gene3D G3DSA:3.60.20.10 2 238 8.7E-76 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_04470 80ff8180838b39386b42be00193da632 612 Pfam PF01380 SIS domain 289 420 6.8E-31 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AYJ52_04470 80ff8180838b39386b42be00193da632 612 Pfam PF01380 SIS domain 465 594 1.2E-28 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AYJ52_09405 36f95ee4c2a603265a6b49e617a8049b 283 Gene3D G3DSA:3.40.50.1000 35 247 1.1E-49 T 11-10-2018 IPR023214 HAD superfamily AYJ52_09405 36f95ee4c2a603265a6b49e617a8049b 283 Gene3D G3DSA:3.30.70.1020 115 188 1.1E-49 T 11-10-2018 AYJ52_09405 36f95ee4c2a603265a6b49e617a8049b 283 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 31 258 1.4E-38 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AYJ52_09405 36f95ee4c2a603265a6b49e617a8049b 283 Pfam PF02358 Trehalose-phosphatase 36 249 1.5E-33 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AYJ52_09405 36f95ee4c2a603265a6b49e617a8049b 283 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 35 225 8.1E-18 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AYJ52_09405 36f95ee4c2a603265a6b49e617a8049b 283 SUPERFAMILY SSF56784 35 261 3.22E-41 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_02170 9e384bb5652ba524383179171dd2bc5c 407 SUPERFAMILY SSF55073 250 402 4.71E-42 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_02170 9e384bb5652ba524383179171dd2bc5c 407 SMART SM00267 234 403 6.6E-53 T 11-10-2018 IPR000160 GGDEF domain AYJ52_02170 9e384bb5652ba524383179171dd2bc5c 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 398 5.3E-39 T 11-10-2018 IPR000160 GGDEF domain AYJ52_02170 9e384bb5652ba524383179171dd2bc5c 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 245 396 2.4E-45 T 11-10-2018 IPR000160 GGDEF domain AYJ52_02170 9e384bb5652ba524383179171dd2bc5c 407 Pfam PF17152 Periplasmic sensor domain 43 141 1.8E-16 T 11-10-2018 IPR033417 Periplasmic sensor domain CHASE8 AYJ52_02170 9e384bb5652ba524383179171dd2bc5c 407 Gene3D G3DSA:3.30.70.270 229 403 1.2E-50 T 11-10-2018 AYJ52_00235 43cd04669ffe3e201bda5db1768758bd 263 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 25 262 2.7E-68 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AYJ52_00235 43cd04669ffe3e201bda5db1768758bd 263 PIRSF PIRSF015626 3 263 6.1E-77 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AYJ52_00235 43cd04669ffe3e201bda5db1768758bd 263 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 5 263 29.602 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AYJ52_00235 43cd04669ffe3e201bda5db1768758bd 263 SUPERFAMILY SSF53927 12 262 3.91E-76 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AYJ52_00235 43cd04669ffe3e201bda5db1768758bd 263 Gene3D G3DSA:3.40.140.10 122 263 3.5E-45 T 11-10-2018 AYJ52_00235 43cd04669ffe3e201bda5db1768758bd 263 Gene3D G3DSA:3.10.20.10 31 116 4.0E-6 T 11-10-2018 AYJ52_00235 43cd04669ffe3e201bda5db1768758bd 263 Pfam PF02634 FdhD/NarQ family 29 262 1.9E-68 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AYJ52_04100 12ecc0004c9234c1792cbcc3746e67ad 905 Gene3D G3DSA:3.40.50.970 53 467 2.9E-133 T 11-10-2018 AYJ52_04100 12ecc0004c9234c1792cbcc3746e67ad 905 SUPERFAMILY SSF52922 697 879 2.62E-50 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_04100 12ecc0004c9234c1792cbcc3746e67ad 905 Gene3D G3DSA:3.40.50.970 468 701 2.1E-106 T 11-10-2018 AYJ52_04100 12ecc0004c9234c1792cbcc3746e67ad 905 SUPERFAMILY SSF52518 469 696 1.41E-94 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_04100 12ecc0004c9234c1792cbcc3746e67ad 905 Gene3D G3DSA:3.40.50.920 702 883 1.8E-66 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_04100 12ecc0004c9234c1792cbcc3746e67ad 905 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 880 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AYJ52_04100 12ecc0004c9234c1792cbcc3746e67ad 905 PIRSF PIRSF000156 2 884 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AYJ52_04100 12ecc0004c9234c1792cbcc3746e67ad 905 SUPERFAMILY SSF52518 54 464 1.55E-138 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_04100 12ecc0004c9234c1792cbcc3746e67ad 905 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 134 291 1.6E-8 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AYJ52_15395 c7e9369b39c2fe6397c4cf14c6d98f61 334 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 62 86 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AYJ52_15395 c7e9369b39c2fe6397c4cf14c6d98f61 334 SUPERFAMILY SSF53613 1 319 4.37E-77 T 11-10-2018 IPR029056 Ribokinase-like AYJ52_15395 c7e9369b39c2fe6397c4cf14c6d98f61 334 Pfam PF00294 pfkB family carbohydrate kinase 45 317 8.1E-58 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AYJ52_15395 c7e9369b39c2fe6397c4cf14c6d98f61 334 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 273 286 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AYJ52_15395 c7e9369b39c2fe6397c4cf14c6d98f61 334 Gene3D G3DSA:3.40.1190.20 7 314 1.3E-81 T 11-10-2018 IPR029056 Ribokinase-like AYJ52_15395 c7e9369b39c2fe6397c4cf14c6d98f61 334 Gene3D G3DSA:3.30.1110.10 14 133 1.3E-81 T 11-10-2018 AYJ52_00065 a783bf55f4793c566b02ea5e3ddfb2db 356 SUPERFAMILY SSF56042 176 342 5.83E-63 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AYJ52_00065 a783bf55f4793c566b02ea5e3ddfb2db 356 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 354 46.754 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_00065 a783bf55f4793c566b02ea5e3ddfb2db 356 SUPERFAMILY SSF55326 12 175 1.32E-51 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AYJ52_00065 a783bf55f4793c566b02ea5e3ddfb2db 356 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 342 1.2E-37 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AYJ52_00065 a783bf55f4793c566b02ea5e3ddfb2db 356 Gene3D G3DSA:3.30.1330.10 11 175 7.0E-67 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AYJ52_00065 a783bf55f4793c566b02ea5e3ddfb2db 356 Gene3D G3DSA:3.90.650.10 176 347 3.6E-70 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AYJ52_00065 a783bf55f4793c566b02ea5e3ddfb2db 356 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 169 2.4E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AYJ52_00065 a783bf55f4793c566b02ea5e3ddfb2db 356 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 339 5.7E-146 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_16945 65ad5168cefe05bcda1c01ae96f24a53 348 Pfam PF02353 Mycolic acid cyclopropane synthetase 67 330 6.8E-44 T 11-10-2018 AYJ52_16945 65ad5168cefe05bcda1c01ae96f24a53 348 Gene3D G3DSA:3.40.50.150 54 341 1.4E-74 T 11-10-2018 AYJ52_16945 65ad5168cefe05bcda1c01ae96f24a53 348 SUPERFAMILY SSF53335 70 339 6.6E-60 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_08335 3ce7050edc256b2191c79efe70680cd8 86 Pfam PF04023 FeoA domain 1 80 1.3E-14 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AYJ52_08335 3ce7050edc256b2191c79efe70680cd8 86 SUPERFAMILY SSF50037 5 82 9.84E-13 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AYJ52_08335 3ce7050edc256b2191c79efe70680cd8 86 SMART SM00899 1 81 2.8E-15 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AYJ52_08335 3ce7050edc256b2191c79efe70680cd8 86 Gene3D G3DSA:2.30.30.90 1 86 2.5E-20 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain AYJ52_02830 29a0d2b449c66fd59254780bad7c4d67 200 Gene3D G3DSA:3.40.50.10990 2 175 5.2E-71 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AYJ52_02830 29a0d2b449c66fd59254780bad7c4d67 200 Pfam PF00925 GTP cyclohydrolase II 8 171 1.2E-65 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AYJ52_02830 29a0d2b449c66fd59254780bad7c4d67 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 197 43.503 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AYJ52_02830 29a0d2b449c66fd59254780bad7c4d67 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 194 3.6E-76 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AYJ52_02830 29a0d2b449c66fd59254780bad7c4d67 200 SUPERFAMILY SSF142695 3 174 1.1E-61 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AYJ52_11280 aa498b36a2120a7814ff1aa818322053 203 Gene3D G3DSA:1.20.1050.10 83 189 3.2E-59 T 11-10-2018 AYJ52_11280 aa498b36a2120a7814ff1aa818322053 203 SUPERFAMILY SSF47616 81 199 1.95E-21 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_11280 aa498b36a2120a7814ff1aa818322053 203 SUPERFAMILY SSF52833 1 78 1.32E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_11280 aa498b36a2120a7814ff1aa818322053 203 Gene3D G3DSA:3.40.30.10 3 195 3.2E-59 T 11-10-2018 AYJ52_11280 aa498b36a2120a7814ff1aa818322053 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 75 2.5E-9 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_11280 aa498b36a2120a7814ff1aa818322053 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 189 2.5E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 SUPERFAMILY SSF63418 13 109 8.89E-23 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 SUPERFAMILY SSF53623 114 323 1.2E-55 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 14 463 31.021 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 Gene3D G3DSA:3.90.190.20 323 466 7.9E-47 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 Gene3D G3DSA:3.40.1190.10 94 322 5.7E-90 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 401 6.0E-13 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 42 461 1.7E-126 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 Gene3D G3DSA:3.40.1390.10 1 93 9.4E-38 T 11-10-2018 AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 Pfam PF01225 Mur ligase family, catalytic domain 36 94 5.9E-8 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 SUPERFAMILY SSF53244 325 461 5.04E-29 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_03290 3cf3eec617e446302652a9d1a24bd679 466 Pfam PF08245 Mur ligase middle domain 120 303 1.4E-45 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AYJ52_16860 91bc299f457305a562591a5601c9e368 457 Gene3D G3DSA:2.120.10.30 162 373 1.7E-15 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AYJ52_16860 91bc299f457305a562591a5601c9e368 457 SUPERFAMILY SSF50952 65 437 6.02E-38 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AYJ52_16860 91bc299f457305a562591a5601c9e368 457 Pfam PF07995 Glucose / Sorbosone dehydrogenase 170 363 2.4E-15 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 3.4E-53 T 11-10-2018 AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 SUPERFAMILY SSF51735 3 244 2.37E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 6.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 6.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15055 a6fafbeb94446c88bd2286e4d7b5b00b 245 Gene3D G3DSA:3.40.50.720 1 244 3.3E-66 T 11-10-2018 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 233 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 199 208 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 156 163 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 239 248 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 139 151 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 7.3E-24 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 Gene3D G3DSA:3.10.20.30 1 102 2.6E-31 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 156 163 3.8E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 3.8E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 303 311 3.8E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 SUPERFAMILY SSF54292 9 100 6.55E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 Gene3D G3DSA:2.40.30.10 103 202 6.7E-25 T 11-10-2018 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 Pfam PF00175 Oxidoreductase NAD-binding domain 215 317 2.3E-23 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 Gene3D G3DSA:3.40.50.80 203 335 3.1E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 88 8.6E-17 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 Pfam PF00970 Oxidoreductase FAD-binding domain 111 205 2.1E-20 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 SUPERFAMILY SSF63380 109 205 1.79E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_11345 c3a544ffcbb30372ee77555b6cbf500f 338 SUPERFAMILY SSF52343 193 333 1.44E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_09305 7b49918673298d4c548ec4b296de0caf 189 SUPERFAMILY SSF51283 3 188 8.77E-55 T 11-10-2018 IPR036157 dUTPase-like superfamily AYJ52_09305 7b49918673298d4c548ec4b296de0caf 189 Hamap MF_00146 dCTP deaminase [dcd]. 1 189 29.037 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AYJ52_09305 7b49918673298d4c548ec4b296de0caf 189 Gene3D G3DSA:2.70.40.10 1 161 3.7E-55 T 11-10-2018 IPR036157 dUTPase-like superfamily AYJ52_09305 7b49918673298d4c548ec4b296de0caf 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 1.2E-51 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AYJ52_09305 7b49918673298d4c548ec4b296de0caf 189 Pfam PF00692 dUTPase 81 184 6.4E-9 T 11-10-2018 IPR029054 dUTPase-like AYJ52_08145 4cbe7cd870704071fb2e112469e2364d 256 SUPERFAMILY SSF81606 8 251 1.06E-27 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AYJ52_08145 4cbe7cd870704071fb2e112469e2364d 256 Gene3D G3DSA:3.60.40.10 8 250 2.7E-25 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AYJ52_08145 4cbe7cd870704071fb2e112469e2364d 256 Pfam PF13672 Protein phosphatase 2C 41 210 5.8E-7 T 11-10-2018 AYJ52_08145 4cbe7cd870704071fb2e112469e2364d 256 SMART SM00332 3 249 0.0025 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AYJ52_01350 74b6ae618aa3801ccf823cdda231f668 491 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 461 1.9E-148 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_01350 74b6ae618aa3801ccf823cdda231f668 491 PRINTS PR00175 Sodium/alanine symporter signature 96 118 6.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_01350 74b6ae618aa3801ccf823cdda231f668 491 PRINTS PR00175 Sodium/alanine symporter signature 325 343 6.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_01350 74b6ae618aa3801ccf823cdda231f668 491 PRINTS PR00175 Sodium/alanine symporter signature 202 220 6.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_01350 74b6ae618aa3801ccf823cdda231f668 491 PRINTS PR00175 Sodium/alanine symporter signature 430 450 6.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_01350 74b6ae618aa3801ccf823cdda231f668 491 PRINTS PR00175 Sodium/alanine symporter signature 370 392 6.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_01350 74b6ae618aa3801ccf823cdda231f668 491 PRINTS PR00175 Sodium/alanine symporter signature 230 249 6.3E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_01350 74b6ae618aa3801ccf823cdda231f668 491 Pfam PF01235 Sodium:alanine symporter family 61 474 3.5E-150 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_01350 74b6ae618aa3801ccf823cdda231f668 491 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 96 111 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AYJ52_02380 d62cf737df000fc9a0e94a6cffb7d6a3 285 SUPERFAMILY SSF53335 8 276 7.35E-83 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_02380 d62cf737df000fc9a0e94a6cffb7d6a3 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 283 6.5E-71 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AYJ52_02380 d62cf737df000fc9a0e94a6cffb7d6a3 285 Gene3D G3DSA:3.40.50.150 1 285 1.2E-99 T 11-10-2018 AYJ52_02380 d62cf737df000fc9a0e94a6cffb7d6a3 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 270 39.623 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AYJ52_15870 0008fbef8899f159525153fd741be931 926 Pfam PF01568 Molydopterin dinucleotide binding domain 614 725 1.5E-27 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AYJ52_15870 0008fbef8899f159525153fd741be931 926 PIRSF PIRSF036643 5 747 2.4E-152 T 11-10-2018 AYJ52_15870 0008fbef8899f159525153fd741be931 926 PIRSF PIRSF036643 874 926 30.0 T 11-10-2018 AYJ52_15870 0008fbef8899f159525153fd741be931 926 SUPERFAMILY SSF53706 17 616 1.83E-183 T 11-10-2018 AYJ52_15870 0008fbef8899f159525153fd741be931 926 Gene3D G3DSA:2.20.25.90 16 71 1.4E-17 T 11-10-2018 AYJ52_15870 0008fbef8899f159525153fd741be931 926 Gene3D G3DSA:2.40.40.20 611 731 2.1E-37 T 11-10-2018 AYJ52_15870 0008fbef8899f159525153fd741be931 926 Pfam PF04324 BFD-like [2Fe-2S] binding domain 869 918 2.2E-11 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AYJ52_15870 0008fbef8899f159525153fd741be931 926 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 70 1.7E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_15870 0008fbef8899f159525153fd741be931 926 Gene3D G3DSA:3.40.50.740 90 594 2.3E-170 T 11-10-2018 AYJ52_15870 0008fbef8899f159525153fd741be931 926 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 21 39 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AYJ52_15870 0008fbef8899f159525153fd741be931 926 SUPERFAMILY SSF50692 604 745 2.24E-40 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AYJ52_15870 0008fbef8899f159525153fd741be931 926 SMART SM00926 16 73 3.7E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_15870 0008fbef8899f159525153fd741be931 926 Gene3D G3DSA:3.40.228.10 157 598 2.3E-170 T 11-10-2018 AYJ52_15870 0008fbef8899f159525153fd741be931 926 Pfam PF00384 Molybdopterin oxidoreductase 76 504 1.6E-83 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 1.3E-17 T 11-10-2018 AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 SUPERFAMILY SSF54909 66 151 6.97E-18 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 Gene3D G3DSA:3.30.70.920 56 149 3.5E-20 T 11-10-2018 AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 SUPERFAMILY SSF46785 4 61 1.42E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 2.7E-19 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.5E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.5E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.5E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 Gene3D G3DSA:1.10.10.10 1 55 7.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AYJ52_05565 f512fa2d3313207f34bb422da027b35d 155 SMART SM00344 4 113 3.3E-43 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_17360 9bbb7c326780462b57b44ac9088970ec 337 Gene3D G3DSA:1.20.970.10 14 82 1.9E-24 T 11-10-2018 AYJ52_17360 9bbb7c326780462b57b44ac9088970ec 337 SUPERFAMILY SSF47648 22 80 5.36E-15 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AYJ52_17360 9bbb7c326780462b57b44ac9088970ec 337 Pfam PF02885 Glycosyl transferase family, helical bundle domain 24 77 1.1E-14 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AYJ52_17360 9bbb7c326780462b57b44ac9088970ec 337 Gene3D G3DSA:3.40.1030.10 85 334 5.6E-61 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AYJ52_17360 9bbb7c326780462b57b44ac9088970ec 337 Pfam PF00591 Glycosyl transferase family, a/b domain 108 324 3.2E-13 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AYJ52_17360 9bbb7c326780462b57b44ac9088970ec 337 SUPERFAMILY SSF52418 87 331 7.2E-62 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AYJ52_01530 7f8735c629530d94ce371cd45abb8568 268 Pfam PF00561 alpha/beta hydrolase fold 17 118 1.3E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_01530 7f8735c629530d94ce371cd45abb8568 268 SUPERFAMILY SSF53474 3 261 2.86E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_01530 7f8735c629530d94ce371cd45abb8568 268 Gene3D G3DSA:3.40.50.1820 8 264 1.3E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_01530 7f8735c629530d94ce371cd45abb8568 268 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 262 9.5E-92 T 11-10-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 AYJ52_12650 0a038ca47eca585febb9f6ef53338e81 208 Pfam PF14834 Glutathione S-transferase, C-terminal domain 92 206 1.7E-46 T 11-10-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AYJ52_12650 0a038ca47eca585febb9f6ef53338e81 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 85 4.5E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_12650 0a038ca47eca585febb9f6ef53338e81 208 SUPERFAMILY SSF52833 7 91 1.79E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_12650 0a038ca47eca585febb9f6ef53338e81 208 Gene3D G3DSA:3.40.30.10 8 203 4.8E-81 T 11-10-2018 AYJ52_12650 0a038ca47eca585febb9f6ef53338e81 208 Gene3D G3DSA:1.20.1050.10 87 195 4.8E-81 T 11-10-2018 AYJ52_12650 0a038ca47eca585febb9f6ef53338e81 208 SUPERFAMILY SSF47616 84 204 4.06E-13 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_19750 025cd1f9d36ceba71a9e1af2ff98d1e3 106 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 41 102 7.3E-12 T 11-10-2018 IPR009387 Toxin HigB-2 AYJ52_19750 025cd1f9d36ceba71a9e1af2ff98d1e3 106 PIRSF PIRSF039032 1 105 2.9E-38 T 11-10-2018 IPR009387 Toxin HigB-2 AYJ52_13355 baa4ec2c5738f224d5ea0b9e1c67242d 103 SMART SM00418 19 97 1.2E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_13355 baa4ec2c5738f224d5ea0b9e1c67242d 103 SUPERFAMILY SSF46785 14 100 1.27E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_13355 baa4ec2c5738f224d5ea0b9e1c67242d 103 Gene3D G3DSA:1.10.10.10 6 103 9.7E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_13355 baa4ec2c5738f224d5ea0b9e1c67242d 103 Pfam PF01022 Bacterial regulatory protein, arsR family 28 71 3.8E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_13355 baa4ec2c5738f224d5ea0b9e1c67242d 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 5.2E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_13355 baa4ec2c5738f224d5ea0b9e1c67242d 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 5.2E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_13355 baa4ec2c5738f224d5ea0b9e1c67242d 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 5.2E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_06620 9d21e079fa345bf4925991145ca7318d 146 PRINTS PR01650 Bacterial translocase SecE signature 87 107 8.9E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AYJ52_06620 9d21e079fa345bf4925991145ca7318d 146 PRINTS PR01650 Bacterial translocase SecE signature 131 146 8.9E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AYJ52_06620 9d21e079fa345bf4925991145ca7318d 146 PRINTS PR01650 Bacterial translocase SecE signature 111 131 8.9E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AYJ52_06620 9d21e079fa345bf4925991145ca7318d 146 PRINTS PR01650 Bacterial translocase SecE signature 66 87 8.9E-15 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AYJ52_06620 9d21e079fa345bf4925991145ca7318d 146 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 94 144 5.6E-17 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AYJ52_06620 9d21e079fa345bf4925991145ca7318d 146 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 91 145 6.7E-19 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AYJ52_06620 9d21e079fa345bf4925991145ca7318d 146 Hamap MF_00422 Protein translocase subunit SecE [secE]. 88 143 12.785 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AYJ52_06620 9d21e079fa345bf4925991145ca7318d 146 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 93 121 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AYJ52_06620 9d21e079fa345bf4925991145ca7318d 146 Gene3D G3DSA:1.20.5.1030 88 144 9.5E-16 T 11-10-2018 IPR038379 SecE superfamily AYJ52_19020 75944ad78a98e093fb32abe1cd0e3171 352 SUPERFAMILY SSF53067 190 346 3.16E-28 T 11-10-2018 AYJ52_19020 75944ad78a98e093fb32abe1cd0e3171 352 SUPERFAMILY SSF53067 10 176 6.04E-27 T 11-10-2018 AYJ52_19020 75944ad78a98e093fb32abe1cd0e3171 352 Gene3D G3DSA:3.30.420.40 11 187 6.9E-49 T 11-10-2018 AYJ52_19020 75944ad78a98e093fb32abe1cd0e3171 352 Gene3D G3DSA:3.30.420.40 193 316 6.9E-49 T 11-10-2018 AYJ52_19020 75944ad78a98e093fb32abe1cd0e3171 352 Pfam PF06406 StbA protein 48 344 9.8E-19 T 11-10-2018 IPR009440 Plasmid segregation protein ParM/StbA AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 Pfam PF00072 Response regulator receiver domain 19 130 2.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 SUPERFAMILY SSF46894 245 311 8.5E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 Pfam PF00196 Bacterial regulatory proteins, luxR family 256 309 8.2E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 SMART SM00421 254 311 1.3E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 ProSitePatterns PS00622 LuxR-type HTH domain signature. 271 298 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 SUPERFAMILY SSF52172 12 149 2.42E-37 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 Gene3D G3DSA:1.10.10.10 255 317 1.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 SMART SM00448 17 130 4.9E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 287 299 4.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 257 271 4.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 271 287 4.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_12570 846ee6e956b9a013bc4e191dfbc4418a 319 Gene3D G3DSA:3.40.50.12740 16 190 5.2E-41 T 11-10-2018 AYJ52_04715 edbea45553743c2c2f60160b33673557 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.2E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_04715 edbea45553743c2c2f60160b33673557 300 SUPERFAMILY SSF46785 5 89 6.28E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_04715 edbea45553743c2c2f60160b33673557 300 SUPERFAMILY SSF53850 90 294 4.19E-40 T 11-10-2018 AYJ52_04715 edbea45553743c2c2f60160b33673557 300 Pfam PF03466 LysR substrate binding domain 89 292 2.2E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_04715 edbea45553743c2c2f60160b33673557 300 Gene3D G3DSA:3.40.190.10 93 290 1.4E-59 T 11-10-2018 AYJ52_04715 edbea45553743c2c2f60160b33673557 300 Gene3D G3DSA:1.10.10.10 4 91 1.2E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_04715 edbea45553743c2c2f60160b33673557 300 Gene3D G3DSA:3.40.190.10 164 263 1.4E-59 T 11-10-2018 AYJ52_05265 17b88ed23b0da8e40ead5516856b16a8 189 Gene3D G3DSA:3.40.80.10 8 189 2.6E-57 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AYJ52_05265 17b88ed23b0da8e40ead5516856b16a8 189 SUPERFAMILY SSF55846 10 185 5.63E-63 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AYJ52_05265 17b88ed23b0da8e40ead5516856b16a8 189 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 173 8.3E-26 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AYJ52_05265 17b88ed23b0da8e40ead5516856b16a8 189 SMART SM00644 22 172 9.7E-41 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 SUPERFAMILY SSF55124 253 419 3.6E-25 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 408 544 2.0E-10 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 2.0E-15 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 326 396 2.4E-16 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 Gene3D G3DSA:3.30.413.10 406 547 3.8E-32 T 11-10-2018 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 Gene3D G3DSA:3.90.480.10 53 387 2.6E-75 T 11-10-2018 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 SUPERFAMILY SSF55124 1 125 1.8E-27 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 SUPERFAMILY SSF56014 405 546 3.01E-39 T 11-10-2018 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 1.0E-39 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 Gene3D G3DSA:3.30.413.10 119 315 2.6E-75 T 11-10-2018 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 PRINTS PR00397 Sirohaem Fe-binding site signature 408 426 5.8E-5 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 PRINTS PR00397 Sirohaem Fe-binding site signature 454 472 5.8E-5 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_01690 6579b6edb72cabdcde24b1ab4f98967b 547 SUPERFAMILY SSF56014 120 278 5.37E-43 T 11-10-2018 AYJ52_11110 c6275ba04034934807535624a9d9bb0e 240 SUPERFAMILY SSF51182 1 233 6.88E-75 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_11110 c6275ba04034934807535624a9d9bb0e 240 PIRSF PIRSF006232 1 238 1.7E-51 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AYJ52_11110 c6275ba04034934807535624a9d9bb0e 240 Pfam PF02678 Pirin 8 119 8.2E-35 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AYJ52_11110 c6275ba04034934807535624a9d9bb0e 240 Gene3D G3DSA:2.60.120.10 12 132 9.5E-56 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_11110 c6275ba04034934807535624a9d9bb0e 240 Gene3D G3DSA:2.60.120.10 133 237 4.0E-28 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_15260 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_15260 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_15260 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_15260 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_14365 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_14365 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_14365 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_14365 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_01950 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_01950 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_01950 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_01950 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_06305 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_06305 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_06305 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_06305 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_11865 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_11865 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_11865 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_11865 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_04275 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_04275 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_04275 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_04275 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_14805 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_14805 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_14805 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_14805 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_09090 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_09090 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_09090 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_09090 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_08355 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_08355 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_08355 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_08355 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_13120 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_13120 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_13120 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_13120 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_12025 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_12025 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_12025 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_12025 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_11630 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_11630 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_11630 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_11630 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_04310 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_04310 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_04310 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_04310 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_00695 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_00695 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_00695 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_00695 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_12780 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_12780 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_12780 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_12780 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_00450 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_00450 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_00450 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_00450 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_14420 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_14420 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_14420 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_14420 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_10120 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_10120 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_10120 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_10120 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_12505 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_12505 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Gene3D G3DSA:3.30.420.10 167 330 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_12505 8bb534c7d89da7c0ae1df3c97a7eecaa 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_12505 8bb534c7d89da7c0ae1df3c97a7eecaa 336 SUPERFAMILY SSF53098 175 321 8.09E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 SUPERFAMILY SSF55186 63 240 1.31E-64 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 SMART SM00863 169 218 3.0E-20 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 Gene3D G3DSA:3.30.980.10 69 221 6.2E-60 T 11-10-2018 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 SUPERFAMILY SSF52954 528 633 6.19E-30 T 11-10-2018 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 Pfam PF03129 Anticodon binding domain 540 629 3.7E-20 T 11-10-2018 IPR004154 Anticodon-binding AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 Gene3D G3DSA:3.30.54.20 130 186 6.2E-60 T 11-10-2018 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 5.9E-224 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 Gene3D G3DSA:3.30.930.10 222 530 1.5E-130 T 11-10-2018 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 SUPERFAMILY SSF81271 3 61 9.48E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 6.2E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 6.2E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 6.2E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 6.2E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 6.2E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 218 1.5E-13 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.664 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 Gene3D G3DSA:3.40.50.800 531 637 5.7E-29 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 528 1.1E-47 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 Gene3D G3DSA:3.10.20.30 3 63 1.2E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 Pfam PF02824 TGS domain 4 61 1.7E-10 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AYJ52_08500 6dfbee64190684de9c385d5dedafc168 640 SUPERFAMILY SSF55681 242 525 2.3E-100 T 11-10-2018 AYJ52_17115 f5b2c6d4a9e0c79a752385b01a798992 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 3.7E-27 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_17115 f5b2c6d4a9e0c79a752385b01a798992 69 SUPERFAMILY SSF50249 4 67 1.41E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_17115 f5b2c6d4a9e0c79a752385b01a798992 69 PIRSF PIRSF002599 1 69 1.5E-22 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AYJ52_17115 f5b2c6d4a9e0c79a752385b01a798992 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_17115 f5b2c6d4a9e0c79a752385b01a798992 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_17115 f5b2c6d4a9e0c79a752385b01a798992 69 PRINTS PR00050 Cold shock protein signature 7 22 1.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_17115 f5b2c6d4a9e0c79a752385b01a798992 69 SMART SM00357 6 69 1.3E-26 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AYJ52_17115 f5b2c6d4a9e0c79a752385b01a798992 69 Gene3D G3DSA:2.40.50.140 5 67 1.5E-27 T 11-10-2018 AYJ52_17115 f5b2c6d4a9e0c79a752385b01a798992 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-10-2018 IPR019844 Cold-shock conserved site AYJ52_10500 06fa758a7be82955f820a3610f064e7a 160 Gene3D G3DSA:2.60.260.20 1 71 3.7E-16 T 11-10-2018 AYJ52_10500 06fa758a7be82955f820a3610f064e7a 160 PIRSF PIRSF036402 2 159 9.5E-40 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AYJ52_10500 06fa758a7be82955f820a3610f064e7a 160 SMART SM00988 2 66 6.2E-14 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal AYJ52_10500 06fa758a7be82955f820a3610f064e7a 160 SUPERFAMILY SSF69287 1 72 1.2E-14 T 11-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily AYJ52_10500 06fa758a7be82955f820a3610f064e7a 160 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 140 22.068 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AYJ52_10500 06fa758a7be82955f820a3610f064e7a 160 SUPERFAMILY SSF69737 72 139 1.83E-20 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 AYJ52_10500 06fa758a7be82955f820a3610f064e7a 160 Pfam PF02814 UreE urease accessory protein, N-terminal domain 6 63 3.0E-11 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal AYJ52_10500 06fa758a7be82955f820a3610f064e7a 160 Pfam PF05194 UreE urease accessory protein, C-terminal domain 73 159 1.0E-27 T 11-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 AYJ52_10500 06fa758a7be82955f820a3610f064e7a 160 Gene3D G3DSA:3.30.70.790 73 144 3.9E-28 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 497 521 1.5E-7 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 377 399 1.5E-7 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 SUPERFAMILY SSF51395 4 361 1.3E-108 T 11-10-2018 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 637 4.7E-22 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 Gene3D G3DSA:3.50.50.60 473 627 1.6E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 SUPERFAMILY SSF51905 471 652 2.59E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 Gene3D G3DSA:3.40.50.720 376 667 1.6E-114 T 11-10-2018 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 5.7E-17 T 11-10-2018 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 620 636 5.7E-17 T 11-10-2018 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 479 5.7E-17 T 11-10-2018 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 5.7E-17 T 11-10-2018 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 1.9E-85 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 Gene3D G3DSA:3.20.20.70 3 369 1.0E-121 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_15310 f32843e55c2e48b9f1dd5f940088ec06 674 SUPERFAMILY SSF51971 334 522 3.3E-39 T 11-10-2018 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.4E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.4E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.117 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 SUPERFAMILY SSF52540 3 301 1.16E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.6E-41 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 Gene3D G3DSA:1.10.150.300 113 200 1.1E-152 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 SUPERFAMILY SSF81271 279 360 7.19E-38 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 8.3E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 PIRSF PIRSF006641 1 363 3.1E-156 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 Gene3D G3DSA:3.10.20.30 48 361 1.1E-152 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.1E-159 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AYJ52_13010 231fd25865cd60132d34c7c286a90666 363 Gene3D G3DSA:3.40.50.300 4 278 1.1E-152 T 11-10-2018 AYJ52_00160 6df31f4e065c330e431b124261fac714 310 SUPERFAMILY SSF52402 2 185 8.37E-57 T 11-10-2018 AYJ52_00160 6df31f4e065c330e431b124261fac714 310 Gene3D G3DSA:3.40.50.1220 184 310 9.0E-54 T 11-10-2018 AYJ52_00160 6df31f4e065c330e431b124261fac714 310 Gene3D G3DSA:3.40.50.620 2 183 6.6E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_00160 6df31f4e065c330e431b124261fac714 310 Pfam PF01012 Electron transfer flavoprotein domain 4 167 1.6E-39 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AYJ52_00160 6df31f4e065c330e431b124261fac714 310 PIRSF PIRSF000089 1 310 1.8E-100 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AYJ52_00160 6df31f4e065c330e431b124261fac714 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AYJ52_00160 6df31f4e065c330e431b124261fac714 310 SUPERFAMILY SSF52467 189 309 2.06E-44 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AYJ52_00160 6df31f4e065c330e431b124261fac714 310 SMART SM00893 3 182 5.9E-52 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AYJ52_00160 6df31f4e065c330e431b124261fac714 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 6.9E-34 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AYJ52_01910 6b04041108a8115cbd0a8831049a1314 691 Gene3D G3DSA:2.170.130.10 38 159 2.9E-25 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_01910 6b04041108a8115cbd0a8831049a1314 691 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 674 691 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AYJ52_01910 6b04041108a8115cbd0a8831049a1314 691 Pfam PF00593 TonB dependent receptor 315 689 1.4E-38 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_01910 6b04041108a8115cbd0a8831049a1314 691 SUPERFAMILY SSF56935 32 691 2.02E-88 T 11-10-2018 AYJ52_01910 6b04041108a8115cbd0a8831049a1314 691 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 148 7.5E-11 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_00605 8211e851653341e131882d1faad61b12 631 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 4.8E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_00605 8211e851653341e131882d1faad61b12 631 Pfam PF01434 Peptidase family M41 387 593 1.3E-77 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AYJ52_00605 8211e851653341e131882d1faad61b12 631 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AYJ52_00605 8211e851653341e131882d1faad61b12 631 Gene3D G3DSA:3.40.50.300 141 327 1.9E-70 T 11-10-2018 AYJ52_00605 8211e851653341e131882d1faad61b12 631 Gene3D G3DSA:2.40.50.920 25 101 7.0E-13 T 11-10-2018 AYJ52_00605 8211e851653341e131882d1faad61b12 631 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 594 3.2E-231 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AYJ52_00605 8211e851653341e131882d1faad61b12 631 Pfam PF06480 FtsH Extracellular 9 71 1.7E-8 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AYJ52_00605 8211e851653341e131882d1faad61b12 631 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 197 216 5.2E-5 T 11-10-2018 AYJ52_00605 8211e851653341e131882d1faad61b12 631 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 616 631 5.2E-5 T 11-10-2018 AYJ52_00605 8211e851653341e131882d1faad61b12 631 Gene3D G3DSA:1.20.58.760 402 600 1.1E-71 T 11-10-2018 AYJ52_00605 8211e851653341e131882d1faad61b12 631 SMART SM00382 189 328 1.2E-25 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_00605 8211e851653341e131882d1faad61b12 631 SUPERFAMILY SSF140990 407 602 2.75E-74 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AYJ52_00605 8211e851653341e131882d1faad61b12 631 Gene3D G3DSA:1.10.8.60 328 401 1.1E-26 T 11-10-2018 AYJ52_00605 8211e851653341e131882d1faad61b12 631 SUPERFAMILY SSF52540 147 396 3.63E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_00605 8211e851653341e131882d1faad61b12 631 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 36.471 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AYJ52_06135 cda2223988be6abe9ffc362d15bb2a47 175 SUPERFAMILY SSF52218 10 129 1.21E-19 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_06135 cda2223988be6abe9ffc362d15bb2a47 175 Pfam PF03358 NADPH-dependent FMN reductase 12 121 2.6E-17 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AYJ52_06135 cda2223988be6abe9ffc362d15bb2a47 175 Gene3D G3DSA:3.40.50.360 4 173 2.9E-26 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_07405 88de369c28c65ce41e1971eaa0d536fc 339 Pfam PF13602 Zinc-binding dehydrogenase 193 333 5.0E-19 T 11-10-2018 AYJ52_07405 88de369c28c65ce41e1971eaa0d536fc 339 Gene3D G3DSA:3.90.180.10 23 333 4.4E-103 T 11-10-2018 AYJ52_07405 88de369c28c65ce41e1971eaa0d536fc 339 SUPERFAMILY SSF51735 118 283 1.72E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_07405 88de369c28c65ce41e1971eaa0d536fc 339 Gene3D G3DSA:3.40.50.720 128 272 4.4E-103 T 11-10-2018 AYJ52_07405 88de369c28c65ce41e1971eaa0d536fc 339 SUPERFAMILY SSF50129 1 144 1.13E-30 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_07405 88de369c28c65ce41e1971eaa0d536fc 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 90 1.7E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AYJ52_07405 88de369c28c65ce41e1971eaa0d536fc 339 SMART SM00829 10 333 2.8E-10 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AYJ52_07405 88de369c28c65ce41e1971eaa0d536fc 339 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 336 2.4E-167 T 11-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AYJ52_18750 5434e38557849bcd360de1afdcf10e29 266 Gene3D G3DSA:1.10.12.10 210 255 4.0E-32 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AYJ52_18750 5434e38557849bcd360de1afdcf10e29 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 264 9.9E-43 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_18750 5434e38557849bcd360de1afdcf10e29 266 SUPERFAMILY SSF52096 9 264 5.35E-66 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_18750 5434e38557849bcd360de1afdcf10e29 266 Gene3D G3DSA:3.90.226.10 10 192 7.8E-62 T 11-10-2018 AYJ52_11465 3369948a5e507aca45ed4318a762b154 223 Pfam PF00717 Peptidase S24-like 139 204 5.9E-9 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AYJ52_11465 3369948a5e507aca45ed4318a762b154 223 SMART SM00530 6 60 1.2E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_11465 3369948a5e507aca45ed4318a762b154 223 Pfam PF01381 Helix-turn-helix 7 60 7.8E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_11465 3369948a5e507aca45ed4318a762b154 223 Gene3D G3DSA:1.10.260.40 2 70 1.8E-16 T 11-10-2018 AYJ52_11465 3369948a5e507aca45ed4318a762b154 223 SUPERFAMILY SSF51306 110 220 5.58E-18 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AYJ52_11465 3369948a5e507aca45ed4318a762b154 223 Gene3D G3DSA:2.10.109.10 100 222 3.6E-14 T 11-10-2018 AYJ52_11465 3369948a5e507aca45ed4318a762b154 223 SUPERFAMILY SSF47413 2 64 3.1E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_05755 c92030f08cc14d0fe33a743c7653b976 101 Gene3D G3DSA:1.10.225.20 1 94 2.6E-32 T 11-10-2018 AYJ52_05755 c92030f08cc14d0fe33a743c7653b976 101 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 4 94 7.2E-35 T 11-10-2018 IPR024476 Protein of unknown function DUF3861 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 149 239 1.7E-24 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 244 33.873 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 6 110 31.901 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 Gene3D G3DSA:1.10.287.1080 145 245 9.7E-26 T 11-10-2018 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 146 239 18.952 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 152 242 3.9E-12 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 Gene3D G3DSA:3.10.20.400 2 97 2.5E-38 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 SUPERFAMILY SSF101386 147 243 1.33E-20 T 11-10-2018 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 32 106 6.0E-34 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 55 109 4.0E-27 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AYJ52_06955 da4a64b88ae3770e30ef1e0a209a2414 257 SUPERFAMILY SSF141734 4 120 1.19E-48 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AYJ52_16980 c94c040ebbca04c5d14b88e79e628e0c 467 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 458 9.3E-105 T 11-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AYJ52_16980 c94c040ebbca04c5d14b88e79e628e0c 467 SMART SM00388 236 302 3.2E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_16980 c94c040ebbca04c5d14b88e79e628e0c 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 301 2.0E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_16980 c94c040ebbca04c5d14b88e79e628e0c 467 Gene3D G3DSA:1.10.287.130 186 304 3.9E-19 T 11-10-2018 AYJ52_16980 c94c040ebbca04c5d14b88e79e628e0c 467 SUPERFAMILY SSF55874 307 459 4.19E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_16980 c94c040ebbca04c5d14b88e79e628e0c 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 458 3.2E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_16980 c94c040ebbca04c5d14b88e79e628e0c 467 SUPERFAMILY SSF47384 220 300 4.32E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_16980 c94c040ebbca04c5d14b88e79e628e0c 467 Gene3D G3DSA:3.30.565.10 306 465 1.6E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_16980 c94c040ebbca04c5d14b88e79e628e0c 467 SMART SM00387 346 461 5.9E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_08455 9cba8b8ed2504f341515e59d6cfbf30e 134 Pfam PF12836 Helix-hairpin-helix motif 71 133 1.8E-23 T 11-10-2018 AYJ52_08455 9cba8b8ed2504f341515e59d6cfbf30e 134 SMART SM00278 112 131 300.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AYJ52_08455 9cba8b8ed2504f341515e59d6cfbf30e 134 SMART SM00278 82 101 2.4E-4 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AYJ52_08455 9cba8b8ed2504f341515e59d6cfbf30e 134 Gene3D G3DSA:1.10.150.280 61 134 5.1E-22 T 11-10-2018 AYJ52_08455 9cba8b8ed2504f341515e59d6cfbf30e 134 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 72 134 5.0E-23 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AYJ52_08455 9cba8b8ed2504f341515e59d6cfbf30e 134 SUPERFAMILY SSF47781 60 134 7.34E-28 T 11-10-2018 IPR010994 RuvA domain 2-like AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 Gene3D G3DSA:2.40.30.10 101 201 3.7E-26 T 11-10-2018 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 Pfam PF00970 Oxidoreductase FAD-binding domain 109 204 4.4E-24 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 SUPERFAMILY SSF54292 3 89 9.18E-22 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 SUPERFAMILY SSF52343 206 336 1.57E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 Gene3D G3DSA:3.10.20.30 2 100 3.3E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 5.6E-16 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 SUPERFAMILY SSF63380 107 204 1.14E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 Gene3D G3DSA:3.40.50.80 202 335 6.4E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 Pfam PF00175 Oxidoreductase NAD-binding domain 214 317 1.0E-20 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 1.4E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 232 1.4E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 1.4E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 161 1.4E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 149 1.4E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 247 1.4E-23 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AYJ52_14230 4868ce3698cd96936af6260f89a0d6a3 342 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AYJ52_06075 dd70808293703079954d84ec7a5068f7 439 SUPERFAMILY SSF103473 9 436 4.05E-90 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_06075 dd70808293703079954d84ec7a5068f7 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_06075 dd70808293703079954d84ec7a5068f7 439 Gene3D G3DSA:1.20.1250.20 12 438 2.7E-91 T 11-10-2018 AYJ52_06075 dd70808293703079954d84ec7a5068f7 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 320 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_06075 dd70808293703079954d84ec7a5068f7 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_06075 dd70808293703079954d84ec7a5068f7 439 Pfam PF00083 Sugar (and other) transporter 52 437 1.5E-46 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AYJ52_05020 c94b270f1b989aeff8ef740dfec598d0 171 SMART SM01001 11 162 1.3E-101 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AYJ52_05020 c94b270f1b989aeff8ef740dfec598d0 171 Pfam PF00731 AIR carboxylase 13 160 5.4E-63 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AYJ52_05020 c94b270f1b989aeff8ef740dfec598d0 171 SUPERFAMILY SSF52255 12 167 8.5E-66 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AYJ52_05020 c94b270f1b989aeff8ef740dfec598d0 171 PIRSF PIRSF001338 8 168 9.0E-66 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AYJ52_05020 c94b270f1b989aeff8ef740dfec598d0 171 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 13 166 2.0E-64 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AYJ52_05020 c94b270f1b989aeff8ef740dfec598d0 171 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 13 166 32.169 T 11-10-2018 IPR033747 Class I PurE AYJ52_05020 c94b270f1b989aeff8ef740dfec598d0 171 Gene3D G3DSA:3.40.50.7700 1 170 8.0E-73 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 863 0.0 T 11-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 654 672 3.9E-30 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 683 701 3.9E-30 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 716 730 3.9E-30 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 609 627 3.9E-30 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 Gene3D G3DSA:3.40.50.300 558 778 2.4E-67 T 11-10-2018 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 Gene3D G3DSA:1.10.8.60 779 876 7.3E-12 T 11-10-2018 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 SUPERFAMILY SSF52540 554 856 1.78E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 Gene3D G3DSA:1.10.1780.10 1 159 3.4E-35 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 320 332 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 SMART SM00382 224 369 4.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 SMART SM00382 605 758 4.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 Pfam PF07724 AAA domain (Cdc48 subfamily) 605 773 4.9E-41 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 SUPERFAMILY SSF81923 10 127 6.67E-17 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 Gene3D G3DSA:3.40.50.300 175 368 9.8E-64 T 11-10-2018 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 229 341 3.2E-11 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 SUPERFAMILY SSF52540 185 511 2.36E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 Gene3D G3DSA:3.40.50.300 370 552 9.9E-40 T 11-10-2018 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 639 657 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 SMART SM01086 779 871 9.9E-7 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AYJ52_12065 07175dc875f8e5ad8bc0f93c97d22028 892 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 779 850 4.3E-11 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AYJ52_13710 dc1f1abdea7fa8e4ac539fcff713e616 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 3.1E-23 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AYJ52_13710 dc1f1abdea7fa8e4ac539fcff713e616 106 SUPERFAMILY SSF89360 1 95 1.1E-32 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AYJ52_13710 dc1f1abdea7fa8e4ac539fcff713e616 106 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AYJ52_13710 dc1f1abdea7fa8e4ac539fcff713e616 106 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 2 106 6.0E-52 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AYJ52_13710 dc1f1abdea7fa8e4ac539fcff713e616 106 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 4.6E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AYJ52_13710 dc1f1abdea7fa8e4ac539fcff713e616 106 Gene3D G3DSA:2.60.300.12 1 106 1.7E-37 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AYJ52_09735 76aa3e835bc911b7d0759a6bf1d6944e 271 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 11 239 39.538 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AYJ52_09735 76aa3e835bc911b7d0759a6bf1d6944e 271 PIRSF PIRSF037208 4 252 6.7E-97 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AYJ52_09735 76aa3e835bc911b7d0759a6bf1d6944e 271 SUPERFAMILY SSF55729 84 243 3.54E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_09735 76aa3e835bc911b7d0759a6bf1d6944e 271 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 113 233 8.3E-39 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AYJ52_09735 76aa3e835bc911b7d0759a6bf1d6944e 271 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 21 91 8.6E-16 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AYJ52_03845 41ed6a8ba607343c6b9c797c1b438e31 208 Gene3D G3DSA:3.40.50.850 1 208 8.4E-61 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_03845 41ed6a8ba607343c6b9c797c1b438e31 208 SUPERFAMILY SSF52499 5 201 3.4E-54 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_03845 41ed6a8ba607343c6b9c797c1b438e31 208 Pfam PF00857 Isochorismatase family 14 165 8.9E-25 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AYJ52_06060 379c36a3a5c6a7b067982d50493e5123 529 SUPERFAMILY SSF54631 299 432 2.81E-19 T 11-10-2018 AYJ52_06060 379c36a3a5c6a7b067982d50493e5123 529 Pfam PF03741 Integral membrane protein TerC family 17 205 8.1E-51 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AYJ52_06060 379c36a3a5c6a7b067982d50493e5123 529 Gene3D G3DSA:3.30.465.10 443 524 5.8E-20 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AYJ52_06060 379c36a3a5c6a7b067982d50493e5123 529 Pfam PF03471 Transporter associated domain 444 520 7.2E-19 T 11-10-2018 IPR005170 Transporter-associated domain AYJ52_06060 379c36a3a5c6a7b067982d50493e5123 529 Gene3D G3DSA:3.10.580.10 294 442 2.6E-37 T 11-10-2018 AYJ52_06060 379c36a3a5c6a7b067982d50493e5123 529 SMART SM01091 443 523 2.0E-24 T 11-10-2018 IPR005170 Transporter-associated domain AYJ52_06060 379c36a3a5c6a7b067982d50493e5123 529 Pfam PF00571 CBS domain 380 429 4.1E-4 T 11-10-2018 IPR000644 CBS domain AYJ52_06060 379c36a3a5c6a7b067982d50493e5123 529 SUPERFAMILY SSF56176 444 520 5.18E-19 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AYJ52_10200 092247fa8a546296d6c82aae4cfbc584 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 9.4E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10200 092247fa8a546296d6c82aae4cfbc584 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 9.4E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10200 092247fa8a546296d6c82aae4cfbc584 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 9.4E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10200 092247fa8a546296d6c82aae4cfbc584 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 9.4E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10200 092247fa8a546296d6c82aae4cfbc584 274 Gene3D G3DSA:3.40.50.1820 4 273 5.9E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10200 092247fa8a546296d6c82aae4cfbc584 274 Pfam PF12697 Alpha/beta hydrolase family 34 265 7.0E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10200 092247fa8a546296d6c82aae4cfbc584 274 SUPERFAMILY SSF53474 5 268 8.99E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_16590 2624472776b0d63d02b0344e1b090a77 258 Gene3D G3DSA:3.40.50.720 12 258 3.4E-82 T 11-10-2018 AYJ52_16590 2624472776b0d63d02b0344e1b090a77 258 Pfam PF00899 ThiF family 20 252 5.7E-65 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AYJ52_16590 2624472776b0d63d02b0344e1b090a77 258 SUPERFAMILY SSF69572 8 256 7.46E-84 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AYJ52_01670 a2b69e9cafc21bef0d50c3baf30e5bfe 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AYJ52_01670 a2b69e9cafc21bef0d50c3baf30e5bfe 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 5.8E-44 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AYJ52_01670 a2b69e9cafc21bef0d50c3baf30e5bfe 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AYJ52_01670 a2b69e9cafc21bef0d50c3baf30e5bfe 391 Gene3D G3DSA:3.40.47.10 126 388 8.9E-143 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_01670 a2b69e9cafc21bef0d50c3baf30e5bfe 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 2.5E-89 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AYJ52_01670 a2b69e9cafc21bef0d50c3baf30e5bfe 391 PIRSF PIRSF000429 1 391 1.9E-116 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_01670 a2b69e9cafc21bef0d50c3baf30e5bfe 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 2.8E-131 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_01670 a2b69e9cafc21bef0d50c3baf30e5bfe 391 SUPERFAMILY SSF53901 269 390 1.69E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_01670 a2b69e9cafc21bef0d50c3baf30e5bfe 391 Gene3D G3DSA:3.40.47.10 5 274 8.9E-143 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_01670 a2b69e9cafc21bef0d50c3baf30e5bfe 391 SUPERFAMILY SSF53901 3 268 2.64E-82 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_03610 6af6317bdcb67a63be56a8e402767255 418 Pfam PF13356 Arm DNA-binding domain 8 97 5.0E-19 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AYJ52_03610 6af6317bdcb67a63be56a8e402767255 418 Gene3D G3DSA:1.10.443.10 213 382 1.6E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AYJ52_03610 6af6317bdcb67a63be56a8e402767255 418 Pfam PF00589 Phage integrase family 236 369 1.4E-10 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AYJ52_03610 6af6317bdcb67a63be56a8e402767255 418 Gene3D G3DSA:1.10.150.130 100 212 1.8E-19 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AYJ52_03610 6af6317bdcb67a63be56a8e402767255 418 SUPERFAMILY SSF56349 108 392 5.3E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AYJ52_03610 6af6317bdcb67a63be56a8e402767255 418 Gene3D G3DSA:3.30.160.390 7 98 5.4E-25 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 SUPERFAMILY SSF160996 194 345 4.97E-34 T 11-10-2018 AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 Gene3D G3DSA:1.10.8.260 265 327 1.7E-123 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 Gene3D G3DSA:3.50.50.60 9 393 1.7E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 8.4E-5 T 11-10-2018 AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 352 374 8.4E-5 T 11-10-2018 AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 8.4E-5 T 11-10-2018 AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 374 1.3E-7 T 11-10-2018 AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 1.3E-7 T 11-10-2018 AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.3E-7 T 11-10-2018 AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 397 1.1E-121 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 Pfam PF03486 HI0933-like protein 7 397 7.3E-142 T 11-10-2018 AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 Gene3D G3DSA:2.40.30.10 192 344 1.7E-123 T 11-10-2018 AYJ52_09235 0d8b12e672a1f2ab7dc7a6435ee8c5a8 399 SUPERFAMILY SSF51905 4 399 2.91E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 SUPERFAMILY SSF54368 2 99 2.35E-35 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 9.6E-195 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 94 2.2E-31 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 Gene3D G3DSA:3.30.590.10 104 457 3.0E-137 T 11-10-2018 AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 Pfam PF00120 Glutamine synthetase, catalytic domain 101 466 4.2E-131 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 SUPERFAMILY SSF55931 101 468 4.81E-129 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 Gene3D G3DSA:3.10.20.70 1 103 4.5E-38 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AYJ52_17720 6fc786528376126298cb7a026cfc03e9 469 SMART SM01230 101 379 1.8E-131 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Pfam PF00623 RNA polymerase Rpb1, domain 2 349 389 1.3E-7 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 490 8.4E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 18 1373 19.096 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 768 1.5E-19 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 25 1362 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 1312 2.7E-77 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 SUPERFAMILY SSF64484 21 1362 0.0 T 11-10-2018 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Gene3D G3DSA:2.40.50.100 1028 1122 1.1E-18 T 11-10-2018 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Gene3D G3DSA:2.40.50.100 953 1027 1.4E-26 T 11-10-2018 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Gene3D G3DSA:1.10.150.390 1312 1372 3.3E-27 T 11-10-2018 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Gene3D G3DSA:1.10.274.100 495 645 6.0E-42 T 11-10-2018 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Pfam PF04983 RNA polymerase Rpb1, domain 3 494 649 2.9E-30 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Gene3D G3DSA:1.10.40.90 379 421 2.5E-20 T 11-10-2018 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 SMART SM00663 240 519 3.5E-177 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Gene3D G3DSA:1.10.1790.20 1131 1310 7.1E-65 T 11-10-2018 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Gene3D G3DSA:2.40.50.100 1147 1211 7.1E-65 T 11-10-2018 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Pfam PF04997 RNA polymerase Rpb1, domain 1 21 347 4.5E-88 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06655 4fa1a796086d46f5f6b2553864553612 1397 Gene3D G3DSA:1.10.132.30 646 795 1.2E-66 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_08825 7521794ce3f3c4c7ad83b666a57ad212 251 Pfam PF05275 Copper resistance protein B precursor (CopB) 43 251 1.9E-45 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AYJ52_08825 7521794ce3f3c4c7ad83b666a57ad212 251 SUPERFAMILY SSF56925 89 250 7.32E-6 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AYJ52_07125 cd5cc9d4c2f0bea9858a69e2835e4471 338 ProSitePatterns PS00534 Ferrochelatase signature. 197 216 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AYJ52_07125 cd5cc9d4c2f0bea9858a69e2835e4471 338 Gene3D G3DSA:3.40.50.1400 171 309 3.7E-92 T 11-10-2018 AYJ52_07125 cd5cc9d4c2f0bea9858a69e2835e4471 338 Pfam PF00762 Ferrochelatase 8 327 1.6E-102 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AYJ52_07125 cd5cc9d4c2f0bea9858a69e2835e4471 338 SUPERFAMILY SSF53800 6 333 1.96E-96 T 11-10-2018 AYJ52_07125 cd5cc9d4c2f0bea9858a69e2835e4471 338 Gene3D G3DSA:3.40.50.1400 8 329 3.7E-92 T 11-10-2018 AYJ52_07125 cd5cc9d4c2f0bea9858a69e2835e4471 338 Hamap MF_00323 Ferrochelatase [hemH]. 7 328 35.46 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AYJ52_07125 cd5cc9d4c2f0bea9858a69e2835e4471 338 TIGRFAM TIGR00109 hemH: ferrochelatase 6 328 2.8E-92 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AYJ52_04115 b0660dec6c88be73d93759351d988f2e 300 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 274 2.2E-96 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AYJ52_04115 b0660dec6c88be73d93759351d988f2e 300 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 42.765 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AYJ52_04115 b0660dec6c88be73d93759351d988f2e 300 SUPERFAMILY SSF54211 133 277 7.59E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_04115 b0660dec6c88be73d93759351d988f2e 300 Gene3D G3DSA:3.30.1700.10 128 299 8.9E-63 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AYJ52_04115 b0660dec6c88be73d93759351d988f2e 300 SUPERFAMILY SSF54211 3 125 1.67E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_04115 b0660dec6c88be73d93759351d988f2e 300 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 297 1.4E-111 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AYJ52_04115 b0660dec6c88be73d93759351d988f2e 300 Gene3D G3DSA:3.30.230.20 1 127 2.4E-42 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AYJ52_07100 c13f13813b3f90762c724c47ffe10b15 616 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 22 336 6.6E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_07100 c13f13813b3f90762c724c47ffe10b15 616 Gene3D G3DSA:3.40.50.300 7 352 8.8E-24 T 11-10-2018 AYJ52_07100 c13f13813b3f90762c724c47ffe10b15 616 SUPERFAMILY SSF52540 9 350 9.11E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07100 c13f13813b3f90762c724c47ffe10b15 616 SMART SM00382 19 351 2.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_10710 f12d19487c5247bbe62faa342667ae6f 336 SUPERFAMILY SSF161098 132 319 1.57E-19 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_10710 f12d19487c5247bbe62faa342667ae6f 336 Gene3D G3DSA:1.10.3720.10 125 335 6.6E-17 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_10710 f12d19487c5247bbe62faa342667ae6f 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 335 3.2E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_06120 bb967ebeea832f987ce9404b78579e5d 292 SUPERFAMILY SSF51569 1 290 1.99E-82 T 11-10-2018 AYJ52_06120 bb967ebeea832f987ce9404b78579e5d 292 PIRSF PIRSF001365 1 292 1.2E-78 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_06120 bb967ebeea832f987ce9404b78579e5d 292 SMART SM01130 2 291 7.8E-91 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_06120 bb967ebeea832f987ce9404b78579e5d 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 4.3E-15 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_06120 bb967ebeea832f987ce9404b78579e5d 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 4.3E-15 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_06120 bb967ebeea832f987ce9404b78579e5d 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 4.3E-15 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_06120 bb967ebeea832f987ce9404b78579e5d 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 4.3E-15 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_06120 bb967ebeea832f987ce9404b78579e5d 292 Pfam PF00701 Dihydrodipicolinate synthetase family 3 289 4.0E-64 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_06120 bb967ebeea832f987ce9404b78579e5d 292 Gene3D G3DSA:3.20.20.70 1 292 2.3E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_02765 c41a062e852e10574da62419acd12d62 209 Pfam PF00156 Phosphoribosyl transferase domain 114 207 1.3E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AYJ52_02765 c41a062e852e10574da62419acd12d62 209 Gene3D G3DSA:3.40.50.2020 104 209 2.3E-17 T 11-10-2018 AYJ52_02765 c41a062e852e10574da62419acd12d62 209 SUPERFAMILY SSF53271 55 207 4.46E-23 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AYJ52_07230 c8f8e1ecd5ad4577149b9e6ed0d99d0d 310 SUPERFAMILY SSF55120 95 307 5.92E-59 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_07230 c8f8e1ecd5ad4577149b9e6ed0d99d0d 310 SUPERFAMILY SSF55174 21 72 2.19E-9 T 11-10-2018 AYJ52_07230 c8f8e1ecd5ad4577149b9e6ed0d99d0d 310 Pfam PF01479 S4 domain 22 68 3.9E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_07230 c8f8e1ecd5ad4577149b9e6ed0d99d0d 310 Gene3D G3DSA:3.10.290.10 10 77 4.2E-18 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AYJ52_07230 c8f8e1ecd5ad4577149b9e6ed0d99d0d 310 SMART SM00363 22 77 4.2E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_07230 c8f8e1ecd5ad4577149b9e6ed0d99d0d 310 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 307 8.2E-79 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_07230 c8f8e1ecd5ad4577149b9e6ed0d99d0d 310 Gene3D G3DSA:3.30.2350.10 95 310 3.7E-67 T 11-10-2018 AYJ52_07230 c8f8e1ecd5ad4577149b9e6ed0d99d0d 310 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_07230 c8f8e1ecd5ad4577149b9e6ed0d99d0d 310 Pfam PF00849 RNA pseudouridylate synthase 104 248 7.2E-30 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_13015 fda77658f18c0c352c5bfb512780ef26 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 217 1.3E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_13015 fda77658f18c0c352c5bfb512780ef26 219 SUPERFAMILY SSF161098 8 202 6.28E-49 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_13015 fda77658f18c0c352c5bfb512780ef26 219 Gene3D G3DSA:1.10.3720.10 2 217 5.0E-55 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_13910 af3c33c6f15a118a120111f0e11694d5 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 98 21.723 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AYJ52_13910 af3c33c6f15a118a120111f0e11694d5 109 Pfam PF02575 YbaB/EbfC DNA-binding family 7 99 3.5E-30 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AYJ52_13910 af3c33c6f15a118a120111f0e11694d5 109 PIRSF PIRSF004555 1 109 3.0E-32 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AYJ52_13910 af3c33c6f15a118a120111f0e11694d5 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 105 3.3E-25 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AYJ52_13910 af3c33c6f15a118a120111f0e11694d5 109 SUPERFAMILY SSF82607 7 103 9.81E-30 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AYJ52_13910 af3c33c6f15a118a120111f0e11694d5 109 Gene3D G3DSA:3.30.1310.10 1 109 5.4E-35 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 Gene3D G3DSA:3.40.50.300 8 194 3.3E-68 T 11-10-2018 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 SUPERFAMILY SSF52540 6 238 6.59E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 Gene3D G3DSA:3.30.70.870 295 376 4.0E-34 T 11-10-2018 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 Pfam PF06421 GTP-binding protein LepA C-terminus 496 602 1.6E-49 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 SUPERFAMILY SSF54980 301 379 1.01E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 TIGRFAM TIGR01393 lepA: elongation factor 4 11 604 8.4E-288 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 163 1.2E-17 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 Pfam PF00679 Elongation factor G C-terminus 408 493 6.4E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 Gene3D G3DSA:3.30.70.2570 488 562 6.3E-32 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 SUPERFAMILY SSF54980 408 502 3.69E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 PRINTS PR00315 GTP-binding elongation factor signature 15 28 1.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 Hamap MF_00071 Elongation factor 4 [lepA]. 1 605 291.382 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 Pfam PF00009 Elongation factor Tu GTP binding domain 11 190 7.1E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 SMART SM00838 407 492 0.0022 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 Gene3D G3DSA:2.40.30.10 195 293 1.3E-31 T 11-10-2018 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 Pfam PF03144 Elongation factor Tu domain 2 214 284 3.4E-11 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AYJ52_18630 15f511056c54da08bda1be598a3d7580 605 Gene3D G3DSA:3.30.70.3380 377 487 1.5E-38 T 11-10-2018 AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 SUPERFAMILY SSF51735 6 261 1.49E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 Gene3D G3DSA:3.40.50.720 1 263 2.3E-67 T 11-10-2018 AYJ52_10205 dae8765cee031e9f9a9c6393cbb6cb9e 264 Pfam PF00106 short chain dehydrogenase 8 201 3.9E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07380 7144c9f94400fc64d5b76fac9caa26b1 366 Gene3D G3DSA:3.40.50.2000 1 174 6.9E-25 T 11-10-2018 AYJ52_07380 7144c9f94400fc64d5b76fac9caa26b1 366 Pfam PF13439 Glycosyltransferase Family 4 13 165 8.1E-27 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AYJ52_07380 7144c9f94400fc64d5b76fac9caa26b1 366 Pfam PF00534 Glycosyl transferases group 1 187 339 6.1E-27 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AYJ52_07380 7144c9f94400fc64d5b76fac9caa26b1 366 SUPERFAMILY SSF53756 7 365 5.97E-65 T 11-10-2018 AYJ52_07380 7144c9f94400fc64d5b76fac9caa26b1 366 Gene3D G3DSA:3.40.50.2000 186 345 2.1E-29 T 11-10-2018 AYJ52_06835 187b30712a88b854b315d8ae8cd26ac9 108 SUPERFAMILY SSF51182 13 105 2.63E-30 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_06835 187b30712a88b854b315d8ae8cd26ac9 108 Pfam PF06865 Protein of unknown function (DUF1255) 13 105 3.8E-32 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AYJ52_06835 187b30712a88b854b315d8ae8cd26ac9 108 Gene3D G3DSA:2.60.120.10 1 108 1.3E-46 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_06835 187b30712a88b854b315d8ae8cd26ac9 108 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 12 107 24.847 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AYJ52_14935 74ed1c0c00bb66cb20d6e662eec4a014 355 SUPERFAMILY SSF51735 7 142 1.41E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14935 74ed1c0c00bb66cb20d6e662eec4a014 355 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 10 125 1.0E-14 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AYJ52_14935 74ed1c0c00bb66cb20d6e662eec4a014 355 Gene3D G3DSA:3.40.50.720 8 153 4.5E-28 T 11-10-2018 AYJ52_14115 9617f58aad246ed23030d05a4b668649 297 Gene3D G3DSA:3.40.190.10 195 264 3.4E-5 T 11-10-2018 AYJ52_14115 9617f58aad246ed23030d05a4b668649 297 Pfam PF03466 LysR substrate binding domain 91 275 1.5E-21 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14115 9617f58aad246ed23030d05a4b668649 297 SUPERFAMILY SSF53850 91 279 9.68E-21 T 11-10-2018 AYJ52_14115 9617f58aad246ed23030d05a4b668649 297 Gene3D G3DSA:3.40.190.10 85 194 1.8E-6 T 11-10-2018 AYJ52_14115 9617f58aad246ed23030d05a4b668649 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.5E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14115 9617f58aad246ed23030d05a4b668649 297 SUPERFAMILY SSF46785 3 114 5.44E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14115 9617f58aad246ed23030d05a4b668649 297 Gene3D G3DSA:1.10.10.10 1 84 1.1E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 SUPERFAMILY SSF82866 756 972 5.36E-32 T 11-10-2018 AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 Pfam PF17131 Outer membrane lipoprotein-sorting protein 1060 1248 1.4E-45 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 Gene3D G3DSA:2.50.20.10 1006 1248 1.9E-61 T 11-10-2018 AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 Pfam PF03176 MMPL family 337 582 1.1E-23 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 Pfam PF03176 MMPL family 759 975 3.4E-15 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 Gene3D G3DSA:3.30.530.20 1 147 1.4E-20 T 11-10-2018 IPR023393 START-like domain superfamily AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 SUPERFAMILY SSF55961 1 143 6.05E-22 T 11-10-2018 AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 141 5.3E-13 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 SUPERFAMILY SSF82866 359 579 3.53E-28 T 11-10-2018 AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 Gene3D G3DSA:1.20.1640.10 792 980 6.7E-19 T 11-10-2018 AYJ52_05670 3d8ffd3cd686f2c5973d04f31f47ddec 1248 Gene3D G3DSA:1.20.1640.10 396 594 1.3E-8 T 11-10-2018 AYJ52_15510 2af262c54058f9c37f58b5fd3e18a701 139 SUPERFAMILY SSF143744 3 134 1.83E-30 T 11-10-2018 IPR038084 GlcG-like domain superfamily AYJ52_15510 2af262c54058f9c37f58b5fd3e18a701 139 Gene3D G3DSA:3.30.450.150 2 135 1.2E-29 T 11-10-2018 IPR038084 GlcG-like domain superfamily AYJ52_15510 2af262c54058f9c37f58b5fd3e18a701 139 Pfam PF03928 Haem-degrading 7 130 8.1E-23 T 11-10-2018 IPR005624 Haem-degrading AYJ52_05045 ab1ee058c2b9c7470f1e8a040dae0de5 301 SUPERFAMILY SSF55486 39 300 1.2E-17 T 11-10-2018 AYJ52_05045 ab1ee058c2b9c7470f1e8a040dae0de5 301 SMART SM00235 130 300 6.9E-5 T 11-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 AYJ52_05045 ab1ee058c2b9c7470f1e8a040dae0de5 301 PRINTS PR00138 Matrixin signature 251 276 7.0E-10 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 AYJ52_05045 ab1ee058c2b9c7470f1e8a040dae0de5 301 PRINTS PR00138 Matrixin signature 58 73 7.0E-10 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 AYJ52_05045 ab1ee058c2b9c7470f1e8a040dae0de5 301 PRINTS PR00138 Matrixin signature 286 299 7.0E-10 T 11-10-2018 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 AYJ52_05045 ab1ee058c2b9c7470f1e8a040dae0de5 301 Gene3D G3DSA:3.40.390.10 125 301 3.5E-18 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AYJ52_05045 ab1ee058c2b9c7470f1e8a040dae0de5 301 Pfam PF00413 Matrixin 33 298 1.9E-13 T 11-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 Gene3D G3DSA:3.40.50.300 167 354 5.5E-64 T 11-10-2018 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 Gene3D G3DSA:1.10.1780.10 1 143 1.8E-38 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 6.8E-15 T 11-10-2018 IPR004176 Clp, N-terminal AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 Gene3D G3DSA:3.40.50.300 437 649 3.0E-80 T 11-10-2018 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 SUPERFAMILY SSF52540 168 419 1.18E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 560 578 2.4E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 489 507 2.4E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 531 549 2.4E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 607 2.4E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 484 643 4.7E-48 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 731 3.3E-23 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 Gene3D G3DSA:1.10.8.60 355 436 3.1E-31 T 11-10-2018 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 305 1.0E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 SMART SM00382 485 652 6.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 SMART SM00382 205 351 5.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 516 534 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 Gene3D G3DSA:1.10.8.60 651 754 2.8E-28 T 11-10-2018 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 SMART SM01086 651 743 2.3E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 SUPERFAMILY SSF81923 1 141 2.49E-49 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AYJ52_15335 b78336e8c5c11d03c35ac40a15f11b15 758 SUPERFAMILY SSF52540 435 727 3.08E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17540 5618abcf2976299b806236ea6bed3a53 380 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 338 362 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_17540 5618abcf2976299b806236ea6bed3a53 380 Pfam PF01098 Cell cycle protein 37 379 6.9E-104 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_17540 5618abcf2976299b806236ea6bed3a53 380 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 27 380 27.044 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_17540 5618abcf2976299b806236ea6bed3a53 380 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 33 380 1.2E-127 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 321 1.1E-128 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 SMART SM00278 449 468 1900.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 SMART SM00278 517 536 13.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 SMART SM00278 485 504 4.6 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 SMART SM00278 549 568 400.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Pfam PF12826 Helix-hairpin-helix motif 515 577 7.8E-21 T 11-10-2018 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Pfam PF14520 Helix-hairpin-helix domain 449 505 0.0027 T 11-10-2018 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Gene3D G3DSA:2.40.50.140 321 393 3.4E-32 T 11-10-2018 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 334 349 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 SMART SM00292 596 673 3.3E-9 T 11-10-2018 IPR001357 BRCT domain AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 SUPERFAMILY SSF52113 596 670 5.52E-17 T 11-10-2018 IPR036420 BRCT domain superfamily AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 410 437 1.3E-7 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Gene3D G3DSA:3.30.470.90 73 320 2.0E-99 T 11-10-2018 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Gene3D G3DSA:1.10.287.610 1 72 1.4E-26 T 11-10-2018 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 325 399 2.2E-31 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 667 3.7E-11 T 11-10-2018 IPR001357 BRCT domain AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 SMART SM00532 5 451 1.2E-247 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Gene3D G3DSA:2.20.70.80 396 433 1.2E-12 T 11-10-2018 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Hamap MF_01588 DNA ligase [ligA]. 4 670 50.601 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 PIRSF PIRSF001604 1 675 1.3E-244 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 SUPERFAMILY SSF50249 321 401 5.48E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Gene3D G3DSA:1.10.150.20 435 510 6.5E-27 T 11-10-2018 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Gene3D G3DSA:3.40.50.10190 590 672 1.6E-25 T 11-10-2018 IPR036420 BRCT domain superfamily AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 SUPERFAMILY SSF56091 4 319 1.05E-116 T 11-10-2018 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 SUPERFAMILY SSF47781 407 588 9.53E-60 T 11-10-2018 IPR010994 RuvA domain 2-like AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 665 4.3E-249 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AYJ52_09385 a99027f803bdaa224e7811edfcf66b90 679 Gene3D G3DSA:1.10.150.20 511 589 4.5E-27 T 11-10-2018 AYJ52_03520 34f9a6bc8038b8052e1b88e598dbc508 213 SMART SM00474 27 198 1.5E-14 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AYJ52_03520 34f9a6bc8038b8052e1b88e598dbc508 213 Gene3D G3DSA:3.30.420.10 13 202 2.3E-40 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_03520 34f9a6bc8038b8052e1b88e598dbc508 213 SUPERFAMILY SSF53098 14 196 6.07E-40 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_03520 34f9a6bc8038b8052e1b88e598dbc508 213 Pfam PF01612 3'-5' exonuclease 28 196 1.9E-25 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AYJ52_09400 3af84622947b5000ce8e16afdf6a562d 477 Gene3D G3DSA:3.40.50.2000 231 438 5.7E-146 T 11-10-2018 AYJ52_09400 3af84622947b5000ce8e16afdf6a562d 477 Gene3D G3DSA:3.40.50.2000 21 450 5.7E-146 T 11-10-2018 AYJ52_09400 3af84622947b5000ce8e16afdf6a562d 477 SUPERFAMILY SSF53756 3 454 5.9E-124 T 11-10-2018 AYJ52_09400 3af84622947b5000ce8e16afdf6a562d 477 Pfam PF00982 Glycosyltransferase family 20 17 453 1.1E-119 T 11-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 AYJ52_17170 ed6555a5686d81e8b64af7c1bfab4d46 148 Gene3D G3DSA:1.10.10.410 92 148 1.6E-17 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AYJ52_17170 ed6555a5686d81e8b64af7c1bfab4d46 148 SUPERFAMILY SSF89095 3 147 4.66E-40 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AYJ52_17170 ed6555a5686d81e8b64af7c1bfab4d46 148 Pfam PF09424 Yqey-like protein 5 147 1.2E-50 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 AYJ52_17170 ed6555a5686d81e8b64af7c1bfab4d46 148 Gene3D G3DSA:1.10.1510.10 1 91 4.9E-27 T 11-10-2018 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 Pfam PF13437 HlyD family secretion protein 248 356 6.7E-18 T 11-10-2018 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 ProSitePatterns PS00543 HlyD family secretion proteins signature. 363 385 - T 11-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 Gene3D G3DSA:2.40.30.170 52 62 1.2E-10 T 11-10-2018 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 Gene3D G3DSA:2.40.30.170 285 376 9.0E-18 T 11-10-2018 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 Pfam PF13533 Biotin-lipoyl like 70 102 4.9E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 Gene3D G3DSA:1.10.287.470 98 126 1.2E-10 T 11-10-2018 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 Gene3D G3DSA:1.10.287.470 148 247 9.0E-18 T 11-10-2018 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 Gene3D G3DSA:2.40.50.100 248 284 9.0E-18 T 11-10-2018 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 Gene3D G3DSA:2.40.50.100 64 97 1.2E-10 T 11-10-2018 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 293 317 4.7E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 363 378 4.7E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 4.7E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 260 281 4.7E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 4.7E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 340 4.7E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 378 398 4.7E-39 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09035 64660b9ef47b414ca398de6d850615a1 398 SUPERFAMILY SSF111369 73 210 1.07E-7 T 11-10-2018 AYJ52_06275 c93013090579e83e4e917f71e8c8d2a1 570 Pfam PF14461 Prokaryotic E2 family B 22 122 3.2E-11 T 11-10-2018 IPR032701 Prokaryotic E2 family B AYJ52_06275 c93013090579e83e4e917f71e8c8d2a1 570 Gene3D G3DSA:3.40.50.720 280 536 1.7E-26 T 11-10-2018 AYJ52_06275 c93013090579e83e4e917f71e8c8d2a1 570 SUPERFAMILY SSF69572 295 441 1.83E-26 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AYJ52_06275 c93013090579e83e4e917f71e8c8d2a1 570 Pfam PF00899 ThiF family 295 439 2.9E-23 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AYJ52_05795 f5c9bc782e9fd6e456a115c234703f6f 208 Pfam PF01810 LysE type translocator 16 201 4.1E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_05795 f5c9bc782e9fd6e456a115c234703f6f 208 PIRSF PIRSF006324 1 206 8.2E-50 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 Gene3D G3DSA:3.30.70.270 257 434 7.6E-50 T 11-10-2018 AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 SMART SM00052 431 678 9.2E-64 T 11-10-2018 IPR001633 EAL domain AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 Pfam PF08448 PAS fold 141 249 5.0E-12 T 11-10-2018 IPR013656 PAS fold-4 AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 415 6.6E-41 T 11-10-2018 IPR000160 GGDEF domain AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 SUPERFAMILY SSF55073 264 423 4.19E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 Gene3D G3DSA:3.20.20.450 435 690 5.8E-69 T 11-10-2018 IPR035919 EAL domain superfamily AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 SUPERFAMILY SSF55785 124 246 1.62E-11 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 SUPERFAMILY SSF141868 440 686 3.01E-65 T 11-10-2018 IPR035919 EAL domain superfamily AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 SUPERFAMILY SSF55785 13 119 1.12E-9 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 Gene3D G3DSA:3.30.450.20 124 256 1.3E-12 T 11-10-2018 AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 420 5.2E-38 T 11-10-2018 IPR000160 GGDEF domain AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 SMART SM00267 248 421 4.6E-52 T 11-10-2018 IPR000160 GGDEF domain AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 Pfam PF00563 EAL domain 440 671 1.8E-54 T 11-10-2018 IPR001633 EAL domain AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 Pfam PF08447 PAS fold 43 104 4.5E-6 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 Gene3D G3DSA:3.30.450.20 8 119 1.9E-11 T 11-10-2018 AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 SMART SM00091 134 201 7.9 T 11-10-2018 IPR000014 PAS domain AYJ52_15555 e76840ca8d410d68d664eb1e9817eccd 696 SMART SM00091 8 73 0.0054 T 11-10-2018 IPR000014 PAS domain AYJ52_14045 53971130de04c36fd5bf403f96d2c89d 231 Gene3D G3DSA:3.60.15.10 1 231 1.0E-78 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_14045 53971130de04c36fd5bf403f96d2c89d 231 SUPERFAMILY SSF56281 5 226 1.54E-50 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_14045 53971130de04c36fd5bf403f96d2c89d 231 Pfam PF00753 Metallo-beta-lactamase superfamily 14 171 7.5E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_14045 53971130de04c36fd5bf403f96d2c89d 231 SMART SM00849 12 171 5.4E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_17395 95c262f3b92e6b1a7ab0651c25eb64f3 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 445 9.8E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_17395 95c262f3b92e6b1a7ab0651c25eb64f3 446 SMART SM00388 224 290 9.9E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_17395 95c262f3b92e6b1a7ab0651c25eb64f3 446 SUPERFAMILY SSF47384 208 290 7.26E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_17395 95c262f3b92e6b1a7ab0651c25eb64f3 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 288 8.2E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_17395 95c262f3b92e6b1a7ab0651c25eb64f3 446 SMART SM00387 339 446 9.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_17395 95c262f3b92e6b1a7ab0651c25eb64f3 446 Gene3D G3DSA:3.30.565.10 291 446 4.5E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_17395 95c262f3b92e6b1a7ab0651c25eb64f3 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 4.1E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_17395 95c262f3b92e6b1a7ab0651c25eb64f3 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 4.1E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_17395 95c262f3b92e6b1a7ab0651c25eb64f3 446 SUPERFAMILY SSF55874 281 445 1.44E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_17395 95c262f3b92e6b1a7ab0651c25eb64f3 446 Gene3D G3DSA:1.10.287.130 174 290 3.1E-20 T 11-10-2018 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 SUPERFAMILY SSF52335 946 1073 3.4E-41 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 SUPERFAMILY SSF48108 396 554 1.7E-53 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 SUPERFAMILY SSF56059 673 933 4.07E-104 T 11-10-2018 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 SUPERFAMILY SSF52440 557 675 2.16E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 547 1.1E-38 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1058 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 SMART SM01096 424 547 8.8E-72 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 SMART SM00851 961 1047 2.3E-35 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Gene3D G3DSA:3.30.470.20 665 935 9.1E-121 T 11-10-2018 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Gene3D G3DSA:3.40.50.1380 943 1075 7.5E-37 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Pfam PF02142 MGS-like domain 962 1047 1.7E-21 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 5.6E-37 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 4.8E-74 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 SUPERFAMILY SSF52440 1 127 7.77E-51 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 SUPERFAMILY SSF56059 128 401 1.61E-110 T 11-10-2018 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Gene3D G3DSA:3.30.470.20 119 403 2.5E-130 T 11-10-2018 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Gene3D G3DSA:1.10.1030.10 404 553 8.2E-48 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Gene3D G3DSA:3.40.50.20 1 116 2.5E-51 T 11-10-2018 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1073 13.525 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Gene3D G3DSA:3.40.50.20 554 662 7.1E-49 T 11-10-2018 AYJ52_00635 a666f773cddf6af680a43f2e43ec176a 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.175 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_18295 75d47a61a3f04e61b568b6de74b37ffb 457 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 15 455 3.6E-255 T 11-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 AYJ52_18295 75d47a61a3f04e61b568b6de74b37ffb 457 Gene3D G3DSA:3.40.640.10 71 338 1.8E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_18295 75d47a61a3f04e61b568b6de74b37ffb 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_18295 75d47a61a3f04e61b568b6de74b37ffb 457 Gene3D G3DSA:3.90.1150.10 23 441 1.8E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_18295 75d47a61a3f04e61b568b6de74b37ffb 457 SUPERFAMILY SSF53383 24 448 3.52E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_18295 75d47a61a3f04e61b568b6de74b37ffb 457 Pfam PF00202 Aminotransferase class-III 34 447 6.9E-95 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 Pfam PF03441 FAD binding domain of DNA photolyase 286 478 2.0E-82 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 Pfam PF00875 DNA photolyase 7 171 1.1E-38 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 PRINTS PR00147 DNA photolyase signature 336 352 4.3E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 PRINTS PR00147 DNA photolyase signature 356 374 4.3E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 PRINTS PR00147 DNA photolyase signature 395 409 4.3E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 PRINTS PR00147 DNA photolyase signature 145 161 4.3E-23 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 Gene3D G3DSA:3.40.50.620 7 213 3.0E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 Gene3D G3DSA:1.10.579.10 304 480 7.9E-80 T 11-10-2018 AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 SUPERFAMILY SSF52425 6 191 1.7E-45 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 Gene3D G3DSA:1.25.40.80 136 297 3.0E-74 T 11-10-2018 AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 336 348 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AYJ52_18440 bfc35690d2a95a3c1d428d31a39c343b 480 SUPERFAMILY SSF48173 201 478 1.57E-108 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Gene3D G3DSA:3.30.420.40 157 320 4.1E-126 T 11-10-2018 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Pfam PF06723 MreB/Mbl protein 13 337 1.4E-140 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 SUPERFAMILY SSF53067 10 151 2.59E-36 T 11-10-2018 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Gene3D G3DSA:3.30.420.40 14 330 4.1E-126 T 11-10-2018 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 337 3.3E-146 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 SUPERFAMILY SSF53067 153 337 4.05E-48 T 11-10-2018 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 3.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 51 69 3.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 71 94 3.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 3.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 3.2E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AYJ52_01270 87cd53bc3f5bfe9b536fa193f50f8bc0 346 Gene3D G3DSA:3.90.640.10 189 262 4.1E-126 T 11-10-2018 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 Gene3D G3DSA:3.90.930.12 1 82 1.9E-26 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.6E-32 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.6E-32 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.6E-32 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 SUPERFAMILY SSF56053 1 82 1.92E-22 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 PIRSF PIRSF002162 1 177 4.8E-44 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 Gene3D G3DSA:3.90.930.12 83 177 4.5E-38 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 Pfam PF00347 Ribosomal protein L6 90 164 3.4E-17 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 Pfam PF00347 Ribosomal protein L6 11 82 8.8E-16 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.121 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 7.7E-72 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AYJ52_02615 99d0e9403e7fbd0b90970c56683aa70c 177 SUPERFAMILY SSF56053 83 177 1.44E-34 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_15415 171078822cc9c93b245d082375c6f52f 528 PIRSF PIRSF006446 353 526 4.8E-31 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AYJ52_15415 171078822cc9c93b245d082375c6f52f 528 PIRSF PIRSF006446 2 328 3.9E-117 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AYJ52_15415 171078822cc9c93b245d082375c6f52f 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 3.8E-174 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AYJ52_11305 6120ee5316ba597ffdf3ffcd44a0bb8b 71 Pfam PF13619 KTSC domain 7 56 7.9E-8 T 11-10-2018 IPR025309 KTSC domain AYJ52_05370 05939d5ae5045e09e29887aa91546d65 338 Gene3D G3DSA:3.90.25.10 195 330 2.6E-136 T 11-10-2018 AYJ52_05370 05939d5ae5045e09e29887aa91546d65 338 SUPERFAMILY SSF51735 1 337 1.71E-95 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_05370 05939d5ae5045e09e29887aa91546d65 338 Gene3D G3DSA:3.40.50.720 4 275 2.6E-136 T 11-10-2018 AYJ52_05370 05939d5ae5045e09e29887aa91546d65 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 336 6.2E-137 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AYJ52_05370 05939d5ae5045e09e29887aa91546d65 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 2.6E-56 T 11-10-2018 IPR016040 NAD(P)-binding domain AYJ52_11945 f9d9fa69506399b4821cbede68c6393e 316 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 187 5.9E-48 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_11945 f9d9fa69506399b4821cbede68c6393e 316 SUPERFAMILY SSF51735 3 188 4.23E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_11945 f9d9fa69506399b4821cbede68c6393e 316 Gene3D G3DSA:3.40.50.720 3 191 4.5E-56 T 11-10-2018 AYJ52_11945 f9d9fa69506399b4821cbede68c6393e 316 SUPERFAMILY SSF48179 191 282 1.53E-12 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_11945 f9d9fa69506399b4821cbede68c6393e 316 Gene3D G3DSA:1.10.1040.10 192 315 7.2E-32 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AYJ52_11945 f9d9fa69506399b4821cbede68c6393e 316 PIRSF PIRSF000105 1 315 3.5E-66 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AYJ52_11945 f9d9fa69506399b4821cbede68c6393e 316 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 246 6.3E-11 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_14700 16616c2df5f1b58294193c9b58be92ba 345 Pfam PF07883 Cupin domain 96 164 4.1E-19 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AYJ52_14700 16616c2df5f1b58294193c9b58be92ba 345 SUPERFAMILY SSF51182 8 342 1.51E-85 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_14700 16616c2df5f1b58294193c9b58be92ba 345 Gene3D G3DSA:2.60.120.10 9 345 1.2E-94 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_13955 b327f81456b70abb5b979a8e2018daf8 283 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 34 181 3.9E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_13955 b327f81456b70abb5b979a8e2018daf8 283 Gene3D G3DSA:3.40.50.300 7 213 8.4E-28 T 11-10-2018 AYJ52_13955 b327f81456b70abb5b979a8e2018daf8 283 SMART SM00382 30 188 6.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_13955 b327f81456b70abb5b979a8e2018daf8 283 SUPERFAMILY SSF52540 16 259 4.21E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_10765 d273e3811a4522330f521dbb86e78182 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 4 446 69.144 T 11-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AYJ52_10765 d273e3811a4522330f521dbb86e78182 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 132 143 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AYJ52_10765 d273e3811a4522330f521dbb86e78182 447 Gene3D G3DSA:1.10.287.400 380 443 2.4E-31 T 11-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AYJ52_10765 d273e3811a4522330f521dbb86e78182 447 Gene3D G3DSA:3.90.1260.10 77 370 2.4E-118 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AYJ52_10765 d273e3811a4522330f521dbb86e78182 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 16 422 5.4E-166 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AYJ52_10765 d273e3811a4522330f521dbb86e78182 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 20 28 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AYJ52_10765 d273e3811a4522330f521dbb86e78182 447 SUPERFAMILY SSF69864 193 445 2.35E-81 T 11-10-2018 AYJ52_10765 d273e3811a4522330f521dbb86e78182 447 SUPERFAMILY SSF52402 7 191 3.97E-35 T 11-10-2018 AYJ52_10765 d273e3811a4522330f521dbb86e78182 447 Pfam PF00764 Arginosuccinate synthase 19 412 9.5E-62 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AYJ52_10765 d273e3811a4522330f521dbb86e78182 447 Gene3D G3DSA:3.40.50.620 17 194 2.4E-118 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_11660 f24bb16125c6219142a02cea2868856e 182 Gene3D G3DSA:2.60.450.10 58 182 6.4E-9 T 11-10-2018 AYJ52_11660 f24bb16125c6219142a02cea2868856e 182 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 178 1.1E-31 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AYJ52_11660 f24bb16125c6219142a02cea2868856e 182 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 178 8.1E-34 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 SMART SM00448 4 115 5.2E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 Gene3D G3DSA:3.40.50.2300 1 124 1.5E-39 T 11-10-2018 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 477 6.7E-226 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 Gene3D G3DSA:3.40.50.300 127 313 1.5E-67 T 11-10-2018 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 SUPERFAMILY SSF52540 141 385 6.83E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 SUPERFAMILY SSF46689 406 480 5.08E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 Pfam PF02954 Bacterial regulatory protein, Fis family 439 477 3.9E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 Gene3D G3DSA:1.10.10.60 387 480 2.4E-23 T 11-10-2018 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 SMART SM00382 162 305 1.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 SUPERFAMILY SSF52172 3 187 1.31E-43 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 Pfam PF00072 Response regulator receiver domain 6 115 4.4E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 Gene3D G3DSA:1.10.8.60 315 386 3.6E-18 T 11-10-2018 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 480 4.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 460 4.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 Pfam PF00158 Sigma-54 interaction domain 142 309 1.7E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AYJ52_15715 6c6c353949ec4cbb24b6cb0cffc34c6f 497 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ52_00535 44304db81790432c5811f2a187d6ad7b 610 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 241 603 9.6E-168 T 11-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AYJ52_00535 44304db81790432c5811f2a187d6ad7b 610 SUPERFAMILY SSF53795 241 606 1.67E-155 T 11-10-2018 AYJ52_00535 44304db81790432c5811f2a187d6ad7b 610 Gene3D G3DSA:2.170.8.10 53 394 1.4E-261 T 11-10-2018 AYJ52_00535 44304db81790432c5811f2a187d6ad7b 610 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 6 607 51.267 T 11-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AYJ52_00535 44304db81790432c5811f2a187d6ad7b 610 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 265 273 - T 11-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AYJ52_00535 44304db81790432c5811f2a187d6ad7b 610 Gene3D G3DSA:3.40.449.10 17 240 1.4E-261 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AYJ52_00535 44304db81790432c5811f2a187d6ad7b 610 PIRSF PIRSF001348 1 608 9.7E-273 T 11-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AYJ52_00535 44304db81790432c5811f2a187d6ad7b 610 SUPERFAMILY SSF68923 4 240 1.26E-99 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AYJ52_00535 44304db81790432c5811f2a187d6ad7b 610 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 18 237 1.2E-102 T 11-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AYJ52_00535 44304db81790432c5811f2a187d6ad7b 610 Gene3D G3DSA:3.90.228.20 241 600 1.4E-261 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AYJ52_07700 5457a8777354a35bd93d6d0c8359af89 425 Gene3D G3DSA:3.40.50.2000 47 220 9.6E-65 T 11-10-2018 AYJ52_07700 5457a8777354a35bd93d6d0c8359af89 425 Pfam PF00534 Glycosyl transferases group 1 232 388 5.2E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AYJ52_07700 5457a8777354a35bd93d6d0c8359af89 425 Gene3D G3DSA:3.40.50.2000 221 399 9.6E-65 T 11-10-2018 AYJ52_07700 5457a8777354a35bd93d6d0c8359af89 425 Pfam PF13439 Glycosyltransferase Family 4 56 224 2.2E-22 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AYJ52_07700 5457a8777354a35bd93d6d0c8359af89 425 SUPERFAMILY SSF53756 44 414 1.65E-71 T 11-10-2018 AYJ52_16550 bedd6ffad55ddc49cab255b2c9598428 238 Gene3D G3DSA:3.40.50.2300 3 132 1.5E-32 T 11-10-2018 AYJ52_16550 bedd6ffad55ddc49cab255b2c9598428 238 SUPERFAMILY SSF52172 11 190 1.25E-37 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_16550 bedd6ffad55ddc49cab255b2c9598428 238 SMART SM00862 155 231 2.5E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_16550 bedd6ffad55ddc49cab255b2c9598428 238 Gene3D G3DSA:1.10.10.10 133 237 2.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_16550 bedd6ffad55ddc49cab255b2c9598428 238 Pfam PF00072 Response regulator receiver domain 13 122 2.3E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_16550 bedd6ffad55ddc49cab255b2c9598428 238 SMART SM00448 11 121 1.9E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_16550 bedd6ffad55ddc49cab255b2c9598428 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 7.1E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_05600 819b4be033c4791bd74344c3a030a7a3 505 Pfam PF00171 Aldehyde dehydrogenase family 21 484 4.8E-145 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_05600 819b4be033c4791bd74344c3a030a7a3 505 SUPERFAMILY SSF53720 7 490 1.7E-151 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_05600 819b4be033c4791bd74344c3a030a7a3 505 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 13 488 1.3E-228 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AYJ52_05600 819b4be033c4791bd74344c3a030a7a3 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_05600 819b4be033c4791bd74344c3a030a7a3 505 Gene3D G3DSA:3.40.309.10 257 457 1.2E-150 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_05600 819b4be033c4791bd74344c3a030a7a3 505 Gene3D G3DSA:3.40.605.10 32 465 1.2E-150 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_16075 2640ca9ca1be8858768ba6414e60ee30 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 1.6E-12 T 11-10-2018 AYJ52_16075 2640ca9ca1be8858768ba6414e60ee30 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 1.6E-12 T 11-10-2018 AYJ52_16075 2640ca9ca1be8858768ba6414e60ee30 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 392 411 1.6E-12 T 11-10-2018 AYJ52_16075 2640ca9ca1be8858768ba6414e60ee30 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 218 236 1.6E-12 T 11-10-2018 AYJ52_16075 2640ca9ca1be8858768ba6414e60ee30 492 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 1.6E-12 T 11-10-2018 AYJ52_16075 2640ca9ca1be8858768ba6414e60ee30 492 Pfam PF07690 Major Facilitator Superfamily 13 401 6.7E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_16075 2640ca9ca1be8858768ba6414e60ee30 492 SUPERFAMILY SSF103473 3 490 8.24E-61 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_16075 2640ca9ca1be8858768ba6414e60ee30 492 Gene3D G3DSA:1.20.1720.10 6 241 5.9E-40 T 11-10-2018 AYJ52_13720 7ef9f88eeb7914ed9eb606db45ed2f93 405 PIRSF PIRSF005572 2 385 1.5E-128 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AYJ52_13720 7ef9f88eeb7914ed9eb606db45ed2f93 405 Gene3D G3DSA:3.40.640.10 16 263 5.7E-158 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_13720 7ef9f88eeb7914ed9eb606db45ed2f93 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 396 54.015 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AYJ52_13720 7ef9f88eeb7914ed9eb606db45ed2f93 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AYJ52_13720 7ef9f88eeb7914ed9eb606db45ed2f93 405 SUPERFAMILY SSF53383 3 392 1.28E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_13720 7ef9f88eeb7914ed9eb606db45ed2f93 405 Gene3D G3DSA:3.90.1150.10 5 377 5.7E-158 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_13720 7ef9f88eeb7914ed9eb606db45ed2f93 405 Pfam PF00266 Aminotransferase class-V 5 369 4.3E-83 T 11-10-2018 IPR000192 Aminotransferase class V domain AYJ52_13720 7ef9f88eeb7914ed9eb606db45ed2f93 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 405 3.1E-209 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AYJ52_07255 83227ab543f5182c40782643a21bee9e 301 SUPERFAMILY SSF53850 91 292 6.4E-33 T 11-10-2018 AYJ52_07255 83227ab543f5182c40782643a21bee9e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.0E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_07255 83227ab543f5182c40782643a21bee9e 301 Gene3D G3DSA:3.40.190.10 163 267 2.9E-48 T 11-10-2018 AYJ52_07255 83227ab543f5182c40782643a21bee9e 301 Pfam PF03466 LysR substrate binding domain 89 291 8.1E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_07255 83227ab543f5182c40782643a21bee9e 301 Gene3D G3DSA:3.40.190.10 94 291 2.9E-48 T 11-10-2018 AYJ52_07255 83227ab543f5182c40782643a21bee9e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_07255 83227ab543f5182c40782643a21bee9e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_07255 83227ab543f5182c40782643a21bee9e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_07255 83227ab543f5182c40782643a21bee9e 301 SUPERFAMILY SSF46785 1 86 5.25E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_07255 83227ab543f5182c40782643a21bee9e 301 Gene3D G3DSA:1.10.10.10 1 93 3.5E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10950 f0e4f9e61ff3fd89aaa7a5db12e29271 303 SMART SM01130 10 301 3.2E-76 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_10950 f0e4f9e61ff3fd89aaa7a5db12e29271 303 SUPERFAMILY SSF51569 12 300 8.48E-69 T 11-10-2018 AYJ52_10950 f0e4f9e61ff3fd89aaa7a5db12e29271 303 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 5 298 7.8E-129 T 11-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 AYJ52_10950 f0e4f9e61ff3fd89aaa7a5db12e29271 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 44 65 8.0E-6 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_10950 f0e4f9e61ff3fd89aaa7a5db12e29271 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 80 98 8.0E-6 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_10950 f0e4f9e61ff3fd89aaa7a5db12e29271 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 111 127 8.0E-6 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_10950 f0e4f9e61ff3fd89aaa7a5db12e29271 303 PIRSF PIRSF001365 6 303 1.3E-62 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_10950 f0e4f9e61ff3fd89aaa7a5db12e29271 303 Gene3D G3DSA:3.20.20.70 1 301 6.8E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_10950 f0e4f9e61ff3fd89aaa7a5db12e29271 303 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 10 301 43.459 T 11-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 AYJ52_10950 f0e4f9e61ff3fd89aaa7a5db12e29271 303 Pfam PF00701 Dihydrodipicolinate synthetase family 12 298 2.1E-57 T 11-10-2018 IPR002220 DapA-like GO:0016829 AYJ52_04060 e00b318183f78c8413c73f55f4624c23 218 SUPERFAMILY SSF50475 15 218 6.48E-60 T 11-10-2018 AYJ52_04060 e00b318183f78c8413c73f55f4624c23 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 14 218 35.966 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AYJ52_04060 e00b318183f78c8413c73f55f4624c23 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 7 218 2.3E-74 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AYJ52_04060 e00b318183f78c8413c73f55f4624c23 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AYJ52_04060 e00b318183f78c8413c73f55f4624c23 218 Gene3D G3DSA:2.30.110.10 4 218 2.5E-75 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AYJ52_04060 e00b318183f78c8413c73f55f4624c23 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 7.9E-19 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AYJ52_04060 e00b318183f78c8413c73f55f4624c23 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 123 1.6E-23 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AYJ52_04060 e00b318183f78c8413c73f55f4624c23 218 PIRSF PIRSF000190 1 218 1.3E-72 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AYJ52_09525 672a17d958802f9a7d8bb91097499bae 98 Gene3D G3DSA:2.40.240.10 3 98 4.7E-29 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_09525 672a17d958802f9a7d8bb91097499bae 98 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 17 97 8.0E-38 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AYJ52_09525 672a17d958802f9a7d8bb91097499bae 98 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 4 98 24.573 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AYJ52_09525 672a17d958802f9a7d8bb91097499bae 98 SUPERFAMILY SSF50715 6 97 2.62E-26 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_09525 672a17d958802f9a7d8bb91097499bae 98 Pfam PF01386 Ribosomal L25p family 6 95 3.0E-25 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AYJ52_02900 27e272b30543028183fe61cd6ab7ff8b 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 24.654 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02900 27e272b30543028183fe61cd6ab7ff8b 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 3.6E-33 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02900 27e272b30543028183fe61cd6ab7ff8b 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 3.6E-33 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02900 27e272b30543028183fe61cd6ab7ff8b 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 3.6E-33 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02900 27e272b30543028183fe61cd6ab7ff8b 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 3.6E-33 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02900 27e272b30543028183fe61cd6ab7ff8b 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 3.6E-33 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02900 27e272b30543028183fe61cd6ab7ff8b 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 550 1.6E-200 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02900 27e272b30543028183fe61cd6ab7ff8b 689 SUPERFAMILY SSF109604 337 489 3.56E-16 T 11-10-2018 AYJ52_02900 27e272b30543028183fe61cd6ab7ff8b 689 Pfam PF05746 DALR anticodon binding domain 582 679 2.2E-7 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AYJ52_02900 27e272b30543028183fe61cd6ab7ff8b 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 3.1E-230 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_01600 46b29a741f29f45a8716a0f4160a440a 712 Gene3D G3DSA:2.40.170.20 176 708 7.4E-92 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_01600 46b29a741f29f45a8716a0f4160a440a 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 160 1.9E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_01600 46b29a741f29f45a8716a0f4160a440a 712 Gene3D G3DSA:2.170.130.10 30 172 1.2E-20 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_01600 46b29a741f29f45a8716a0f4160a440a 712 Pfam PF00593 TonB dependent receptor 237 708 1.9E-47 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_01600 46b29a741f29f45a8716a0f4160a440a 712 SUPERFAMILY SSF56935 30 708 1.79E-117 T 11-10-2018 AYJ52_08520 48a49af46fe54059de497d93b6373b98 416 Pfam PF05977 Transmembrane secretion effector 6 396 6.7E-26 T 11-10-2018 IPR010290 Transmembrane secretion effector AYJ52_08520 48a49af46fe54059de497d93b6373b98 416 SUPERFAMILY SSF103473 12 401 6.93E-33 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_08520 48a49af46fe54059de497d93b6373b98 416 Gene3D G3DSA:1.20.1250.20 11 401 3.1E-27 T 11-10-2018 AYJ52_11310 e7fe9a72ca66f8c282073a018b652c9c 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.0E-104 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AYJ52_11310 e7fe9a72ca66f8c282073a018b652c9c 187 Gene3D G3DSA:3.40.30.10 1 186 5.9E-65 T 11-10-2018 AYJ52_11310 e7fe9a72ca66f8c282073a018b652c9c 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 5.5E-6 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AYJ52_11310 e7fe9a72ca66f8c282073a018b652c9c 187 Pfam PF00578 AhpC/TSA family 5 132 4.0E-35 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AYJ52_11310 e7fe9a72ca66f8c282073a018b652c9c 187 PIRSF PIRSF000239 1 187 6.6E-55 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AYJ52_11310 e7fe9a72ca66f8c282073a018b652c9c 187 SUPERFAMILY SSF52833 1 186 2.91E-59 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_17245 0e17fde790c36bbef0dca78beea04bc7 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 9.1E-28 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_17245 0e17fde790c36bbef0dca78beea04bc7 70 Gene3D G3DSA:2.40.50.140 1 70 1.8E-27 T 11-10-2018 AYJ52_17245 0e17fde790c36bbef0dca78beea04bc7 70 PRINTS PR00050 Cold shock protein signature 7 22 4.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_17245 0e17fde790c36bbef0dca78beea04bc7 70 PRINTS PR00050 Cold shock protein signature 27 36 4.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_17245 0e17fde790c36bbef0dca78beea04bc7 70 PRINTS PR00050 Cold shock protein signature 42 60 4.1E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_17245 0e17fde790c36bbef0dca78beea04bc7 70 PIRSF PIRSF002599 1 70 4.9E-22 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AYJ52_17245 0e17fde790c36bbef0dca78beea04bc7 70 SUPERFAMILY SSF50249 2 69 1.16E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_17245 0e17fde790c36bbef0dca78beea04bc7 70 SMART SM00357 6 69 2.9E-28 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AYJ52_17245 0e17fde790c36bbef0dca78beea04bc7 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-10-2018 IPR019844 Cold-shock conserved site AYJ52_12845 1d2bb312cc4155d80c4147e19fb39614 142 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 6.6E-39 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AYJ52_12845 1d2bb312cc4155d80c4147e19fb39614 142 Pfam PF03960 ArsC family 8 115 8.4E-16 T 11-10-2018 IPR006660 Arsenate reductase-like AYJ52_12845 1d2bb312cc4155d80c4147e19fb39614 142 SUPERFAMILY SSF52833 5 138 3.96E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_12845 1d2bb312cc4155d80c4147e19fb39614 142 Gene3D G3DSA:3.40.30.10 2 142 1.2E-55 T 11-10-2018 AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 SUPERFAMILY SSF55021 340 416 2.41E-25 T 11-10-2018 AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 SUPERFAMILY SSF53633 4 254 1.44E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 Pfam PF01842 ACT domain 279 336 1.7E-11 T 11-10-2018 IPR002912 ACT domain AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 Gene3D G3DSA:3.40.1160.10 1 258 1.0E-87 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 414 2.6E-131 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 414 8.7E-113 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 PIRSF PIRSF000726 1 62 1.4E-20 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 PIRSF PIRSF000726 53 422 1.2E-139 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 Pfam PF00696 Amino acid kinase family 3 229 2.6E-51 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 Gene3D G3DSA:3.30.2130.10 259 423 7.4E-61 T 11-10-2018 AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 Pfam PF13840 ACT domain 348 410 2.7E-18 T 11-10-2018 IPR027795 CASTOR, ACT domain AYJ52_11150 355e6102d751ca1289284b2af43bfef8 426 SUPERFAMILY SSF55021 260 338 1.55E-17 T 11-10-2018 AYJ52_13695 004052abc2e5801057d5adf96c1df96c 112 Gene3D G3DSA:3.10.20.30 1 112 1.7E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_13695 004052abc2e5801057d5adf96c1df96c 112 SUPERFAMILY SSF54292 6 108 5.29E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_13695 004052abc2e5801057d5adf96c1df96c 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AYJ52_13695 004052abc2e5801057d5adf96c1df96c 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 1.2E-52 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AYJ52_13695 004052abc2e5801057d5adf96c1df96c 112 PRINTS PR00355 Adrenodoxin signature 42 52 6.1E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AYJ52_13695 004052abc2e5801057d5adf96c1df96c 112 PRINTS PR00355 Adrenodoxin signature 83 91 6.1E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AYJ52_13695 004052abc2e5801057d5adf96c1df96c 112 PRINTS PR00355 Adrenodoxin signature 60 74 6.1E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AYJ52_13695 004052abc2e5801057d5adf96c1df96c 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 5.0E-10 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AYJ52_14005 938ce4413ba65ba8e9bb3431002a4967 320 Pfam PF00676 Dehydrogenase E1 component 14 309 1.4E-84 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AYJ52_14005 938ce4413ba65ba8e9bb3431002a4967 320 SUPERFAMILY SSF52518 2 319 2.76E-91 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_14005 938ce4413ba65ba8e9bb3431002a4967 320 Gene3D G3DSA:3.40.50.970 1 320 3.9E-112 T 11-10-2018 AYJ52_07635 3c4934e09fea47eeaab71bf9f1f498d7 508 PIRSF PIRSF001394 1 505 3.2E-211 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AYJ52_07635 3c4934e09fea47eeaab71bf9f1f498d7 508 SUPERFAMILY SSF117457 316 486 2.48E-64 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AYJ52_07635 3c4934e09fea47eeaab71bf9f1f498d7 508 Gene3D G3DSA:3.20.130.10 305 487 2.0E-61 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AYJ52_07635 3c4934e09fea47eeaab71bf9f1f498d7 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 14 285 1.0E-68 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AYJ52_07635 3c4934e09fea47eeaab71bf9f1f498d7 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 486 7.7E-49 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AYJ52_07635 3c4934e09fea47eeaab71bf9f1f498d7 508 Pfam PF05681 Fumarate hydratase (Fumerase) 13 285 2.8E-102 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AYJ52_07635 3c4934e09fea47eeaab71bf9f1f498d7 508 Pfam PF05683 Fumarase C-terminus 289 487 7.4E-78 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AYJ52_10995 72c87f6c2ec68496852cac312717f47a 483 SUPERFAMILY SSF53720 2 477 7.72E-149 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_10995 72c87f6c2ec68496852cac312717f47a 483 Gene3D G3DSA:3.40.605.10 2 253 4.8E-77 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_10995 72c87f6c2ec68496852cac312717f47a 483 Gene3D G3DSA:3.40.309.10 254 483 7.3E-73 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_10995 72c87f6c2ec68496852cac312717f47a 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_10995 72c87f6c2ec68496852cac312717f47a 483 Pfam PF00171 Aldehyde dehydrogenase family 16 472 1.6E-145 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_12335 d1362cc58b524e048ce75b131db57675 390 SUPERFAMILY SSF103473 8 379 2.49E-39 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_12335 d1362cc58b524e048ce75b131db57675 390 Pfam PF07690 Major Facilitator Superfamily 16 320 2.0E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_12335 d1362cc58b524e048ce75b131db57675 390 Gene3D G3DSA:1.20.1250.20 7 381 1.4E-36 T 11-10-2018 AYJ52_13765 d19d3985f71c7b2eaca328dc1d866d92 430 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 79 189 1.7E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_13765 d19d3985f71c7b2eaca328dc1d866d92 430 Gene3D G3DSA:1.10.540.10 67 191 4.3E-20 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_13765 d19d3985f71c7b2eaca328dc1d866d92 430 Gene3D G3DSA:1.20.140.10 299 427 1.3E-35 T 11-10-2018 AYJ52_13765 d19d3985f71c7b2eaca328dc1d866d92 430 Gene3D G3DSA:2.40.110.10 210 298 2.8E-8 T 11-10-2018 AYJ52_13765 d19d3985f71c7b2eaca328dc1d866d92 430 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 300 424 2.5E-29 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_13765 d19d3985f71c7b2eaca328dc1d866d92 430 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 398 417 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_13765 d19d3985f71c7b2eaca328dc1d866d92 430 SUPERFAMILY SSF56645 74 285 7.72E-31 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_13765 d19d3985f71c7b2eaca328dc1d866d92 430 SUPERFAMILY SSF47203 299 424 1.77E-36 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_04925 76987bf1225a8ceb8c2af03a07d8721a 130 Pfam PF00825 Ribonuclease P 7 114 1.4E-24 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AYJ52_04925 76987bf1225a8ceb8c2af03a07d8721a 130 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AYJ52_04925 76987bf1225a8ceb8c2af03a07d8721a 130 SUPERFAMILY SSF54211 5 120 1.74E-25 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_04925 76987bf1225a8ceb8c2af03a07d8721a 130 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 117 16.045 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AYJ52_04925 76987bf1225a8ceb8c2af03a07d8721a 130 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 117 4.1E-21 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AYJ52_04925 76987bf1225a8ceb8c2af03a07d8721a 130 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 109 5.0E-37 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AYJ52_04925 76987bf1225a8ceb8c2af03a07d8721a 130 Gene3D G3DSA:3.30.230.10 1 121 3.2E-34 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_03695 a72712c8e8dd2da1b0b69d52b66ae437 333 SUPERFAMILY SSF51430 1 317 9.43E-101 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AYJ52_03695 a72712c8e8dd2da1b0b69d52b66ae437 333 Pfam PF00248 Aldo/keto reductase family 16 313 1.6E-76 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AYJ52_03695 a72712c8e8dd2da1b0b69d52b66ae437 333 Gene3D G3DSA:3.20.20.100 1 332 6.0E-117 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AYJ52_18560 ed3d2399f62aef9acb23f48e51f7412e 411 Pfam PF00155 Aminotransferase class I and II 32 385 2.9E-73 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_18560 ed3d2399f62aef9acb23f48e51f7412e 411 Gene3D G3DSA:3.90.1150.10 27 387 2.6E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_18560 ed3d2399f62aef9acb23f48e51f7412e 411 SUPERFAMILY SSF53383 4 392 2.18E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_18560 ed3d2399f62aef9acb23f48e51f7412e 411 Gene3D G3DSA:3.40.640.10 64 286 2.6E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_18560 ed3d2399f62aef9acb23f48e51f7412e 411 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AYJ52_06945 9b67101376d7326b29653b7c4e98b474 461 SUPERFAMILY SSF52540 1 386 6.11E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_06945 9b67101376d7326b29653b7c4e98b474 461 Pfam PF13476 AAA domain 6 264 4.0E-10 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain AYJ52_06945 9b67101376d7326b29653b7c4e98b474 461 Gene3D G3DSA:3.40.50.300 1 388 2.8E-21 T 11-10-2018 AYJ52_10840 c9db831a38ed4390a4b769b2ff61a133 481 Pfam PF01266 FAD dependent oxidoreductase 74 428 6.3E-46 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AYJ52_10840 c9db831a38ed4390a4b769b2ff61a133 481 Gene3D G3DSA:3.50.50.60 74 428 1.4E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10840 c9db831a38ed4390a4b769b2ff61a133 481 SUPERFAMILY SSF51905 72 364 3.21E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10840 c9db831a38ed4390a4b769b2ff61a133 481 Gene3D G3DSA:3.30.9.10 168 390 1.4E-56 T 11-10-2018 AYJ52_15235 95fa44100d103b3584600aefa936464a 129 Hamap MF_00599 Cell division protein FtsB [ftsB]. 11 99 27.928 T 11-10-2018 IPR023081 Cell division protein FtsB AYJ52_15235 95fa44100d103b3584600aefa936464a 129 Pfam PF04977 Septum formation initiator 20 97 2.0E-23 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC AYJ52_00865 7397750c2269d980d8ee26f72f3cc3ca 157 PIRSF PIRSF029256 1 157 2.3E-60 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AYJ52_00865 7397750c2269d980d8ee26f72f3cc3ca 157 Gene3D G3DSA:3.40.1280.10 1 156 1.3E-58 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ52_00865 7397750c2269d980d8ee26f72f3cc3ca 157 SUPERFAMILY SSF75217 2 155 2.68E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AYJ52_00865 7397750c2269d980d8ee26f72f3cc3ca 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 154 30.544 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AYJ52_00865 7397750c2269d980d8ee26f72f3cc3ca 157 Pfam PF00588 SpoU rRNA Methylase family 2 145 1.9E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 2.7E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 2.7E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 2.7E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 SUPERFAMILY SSF55874 344 518 5.63E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 520 5.2E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 SUPERFAMILY SSF47384 275 356 1.33E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 SMART SM00387 402 523 2.0E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 Gene3D G3DSA:3.30.565.10 354 526 2.2E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 Pfam PF00072 Response regulator receiver domain 665 786 7.6E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 SUPERFAMILY SSF52172 661 828 7.97E-34 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 355 5.3E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 Gene3D G3DSA:1.20.120.160 810 932 3.1E-23 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 SMART SM00073 823 920 0.0036 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 Gene3D G3DSA:3.40.50.2300 647 796 3.7E-38 T 11-10-2018 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 SMART SM00388 289 355 2.1E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 Gene3D G3DSA:1.10.287.130 252 353 9.0E-27 T 11-10-2018 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 SUPERFAMILY SSF47226 769 891 2.49E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 Pfam PF01627 Hpt domain 833 907 8.2E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AYJ52_08420 ca8ddd638872632eeb1cf00f1dc9f0b1 935 SMART SM00448 663 786 8.4E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_11380 73c38380daf6f109a29d0cb1b5e1d2b0 508 Pfam PF04945 YHS domain 424 456 1.7E-9 T 11-10-2018 IPR007029 YHS domain AYJ52_11380 73c38380daf6f109a29d0cb1b5e1d2b0 508 SUPERFAMILY SSF47240 9 506 2.18E-163 T 11-10-2018 IPR009078 Ferritin-like superfamily AYJ52_11380 73c38380daf6f109a29d0cb1b5e1d2b0 508 Gene3D G3DSA:1.10.620.20 6 508 2.8E-217 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AYJ52_11380 73c38380daf6f109a29d0cb1b5e1d2b0 508 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 27 254 1.1E-68 T 11-10-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 AYJ52_14990 e3fb78f7569e585c9bb561471fe14d3f 368 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 3 368 1.8E-185 T 11-10-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 AYJ52_14990 e3fb78f7569e585c9bb561471fe14d3f 368 Gene3D G3DSA:3.30.390.10 28 365 1.7E-118 T 11-10-2018 IPR029017 Enolase-like, N-terminal AYJ52_14990 e3fb78f7569e585c9bb561471fe14d3f 368 Gene3D G3DSA:3.20.20.120 118 353 1.7E-118 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AYJ52_14990 e3fb78f7569e585c9bb561471fe14d3f 368 SMART SM00922 144 241 1.9E-19 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AYJ52_14990 e3fb78f7569e585c9bb561471fe14d3f 368 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 191 222 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AYJ52_14990 e3fb78f7569e585c9bb561471fe14d3f 368 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 5 125 9.5E-32 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AYJ52_14990 e3fb78f7569e585c9bb561471fe14d3f 368 Pfam PF13378 Enolase C-terminal domain-like 148 361 2.4E-42 T 11-10-2018 IPR029065 Enolase C-terminal domain-like AYJ52_14990 e3fb78f7569e585c9bb561471fe14d3f 368 SUPERFAMILY SSF54826 4 126 1.46E-32 T 11-10-2018 AYJ52_14990 e3fb78f7569e585c9bb561471fe14d3f 368 SUPERFAMILY SSF51604 113 367 8.65E-65 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AYJ52_01010 cd6b1dd2a67a5fd08ddbd2f6d877b39e 224 SMART SM00448 2 112 1.0E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_01010 cd6b1dd2a67a5fd08ddbd2f6d877b39e 224 SUPERFAMILY SSF52172 1 175 2.28E-38 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_01010 cd6b1dd2a67a5fd08ddbd2f6d877b39e 224 Pfam PF00072 Response regulator receiver domain 4 112 1.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_01010 cd6b1dd2a67a5fd08ddbd2f6d877b39e 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 8.0E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_01010 cd6b1dd2a67a5fd08ddbd2f6d877b39e 224 SMART SM00862 150 221 1.3E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_01010 cd6b1dd2a67a5fd08ddbd2f6d877b39e 224 Gene3D G3DSA:3.40.50.2300 1 122 1.1E-35 T 11-10-2018 AYJ52_01010 cd6b1dd2a67a5fd08ddbd2f6d877b39e 224 Gene3D G3DSA:1.10.10.10 126 223 1.2E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_00755 fbe739da2fc34801513a0b97d650295a 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 10 228 9.9E-84 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00755 fbe739da2fc34801513a0b97d650295a 236 Gene3D G3DSA:3.10.20.30 1 105 6.6E-35 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_00755 fbe739da2fc34801513a0b97d650295a 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ52_00755 fbe739da2fc34801513a0b97d650295a 236 SUPERFAMILY SSF54292 3 105 4.35E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_00755 fbe739da2fc34801513a0b97d650295a 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 110 2.6E-30 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00755 fbe739da2fc34801513a0b97d650295a 236 Gene3D G3DSA:1.10.1060.10 106 235 3.1E-55 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AYJ52_00755 fbe739da2fc34801513a0b97d650295a 236 SUPERFAMILY SSF46548 106 233 3.84E-37 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AYJ52_00755 fbe739da2fc34801513a0b97d650295a 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 6.9E-9 T 11-10-2018 AYJ52_03920 4439abdd8eaaf500ad9a6999df090f9d 113 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 15 108 2.0E-31 T 11-10-2018 IPR009707 Membrane protein GlpM/YdgC AYJ52_03920 4439abdd8eaaf500ad9a6999df090f9d 113 Pfam PF06942 GlpM protein 6 111 5.5E-45 T 11-10-2018 IPR009707 Membrane protein GlpM/YdgC AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 Gene3D G3DSA:3.30.420.10 2 157 3.3E-51 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 154 8.3E-62 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 5.8E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 5.8E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 5.8E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 5.8E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 5.8E-36 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.4E-59 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 SUPERFAMILY SSF53098 3 155 1.18E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_13220 e8ae6f79cfc36681929498cb0701a88a 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.249 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AYJ52_12255 58934ee9c83ea0d51e3b4d8432c8b018 271 SUPERFAMILY SSF55781 92 269 3.26E-39 T 11-10-2018 AYJ52_12255 58934ee9c83ea0d51e3b4d8432c8b018 271 SUPERFAMILY SSF46785 25 94 5.4E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12255 58934ee9c83ea0d51e3b4d8432c8b018 271 Pfam PF09339 IclR helix-turn-helix domain 26 75 8.9E-16 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_12255 58934ee9c83ea0d51e3b4d8432c8b018 271 Gene3D G3DSA:3.30.450.40 90 271 6.4E-49 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_12255 58934ee9c83ea0d51e3b4d8432c8b018 271 SMART SM00346 23 111 1.9E-32 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_12255 58934ee9c83ea0d51e3b4d8432c8b018 271 Pfam PF01614 Bacterial transcriptional regulator 145 269 1.2E-39 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AYJ52_12255 58934ee9c83ea0d51e3b4d8432c8b018 271 Gene3D G3DSA:1.10.10.10 11 82 5.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12255 58934ee9c83ea0d51e3b4d8432c8b018 271 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 20 270 6.9E-98 T 11-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 Pfam PF14849 YidC periplasmic domain 85 381 9.1E-70 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR01900 YidC translocation/secretion protein signature 508 523 8.5E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR01900 YidC translocation/secretion protein signature 527 551 8.5E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR01900 YidC translocation/secretion protein signature 379 395 8.5E-24 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 393 572 4.2E-70 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 392 3.5E-103 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 Gene3D G3DSA:2.70.98.90 81 373 2.9E-99 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 574 23.009 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 Pfam PF02096 60Kd inner membrane protein 394 572 8.1E-60 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR00701 60kDa inner membrane protein signature 90 111 1.3E-67 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR00701 60kDa inner membrane protein signature 249 267 1.3E-67 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR00701 60kDa inner membrane protein signature 455 478 1.3E-67 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR00701 60kDa inner membrane protein signature 502 524 1.3E-67 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR00701 60kDa inner membrane protein signature 364 384 1.3E-67 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR00701 60kDa inner membrane protein signature 538 561 1.3E-67 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR00701 60kDa inner membrane protein signature 3 24 1.3E-67 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_04935 0bde65103d408e3952faaae8b922af47 586 PRINTS PR00701 60kDa inner membrane protein signature 282 297 1.3E-67 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AYJ52_03905 0e06ad5221cae5113314cf2963b7d363 224 Gene3D G3DSA:1.20.910.10 1 221 2.2E-65 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_03905 0e06ad5221cae5113314cf2963b7d363 224 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 15 214 1.4E-46 T 11-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 AYJ52_03905 0e06ad5221cae5113314cf2963b7d363 224 SUPERFAMILY SSF48613 1 213 6.68E-67 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_03905 0e06ad5221cae5113314cf2963b7d363 224 Pfam PF03070 TENA/THI-4/PQQC family 16 214 2.9E-35 T 11-10-2018 IPR004305 Thiaminase-2/PQQC AYJ52_16680 98afd22e6986f749c7d803d4580919b5 812 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 7 812 6.0E-138 T 11-10-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:1901515 AYJ52_16680 98afd22e6986f749c7d803d4580919b5 812 SUPERFAMILY SSF48452 318 460 5.91E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_07940 ab65a368972d55e1ad808659a71fc9b1 684 SMART SM00267 247 418 5.7E-51 T 11-10-2018 IPR000160 GGDEF domain AYJ52_07940 ab65a368972d55e1ad808659a71fc9b1 684 SMART SM00052 429 674 1.6E-104 T 11-10-2018 IPR001633 EAL domain AYJ52_07940 ab65a368972d55e1ad808659a71fc9b1 684 SUPERFAMILY SSF55073 263 419 1.1E-46 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_07940 ab65a368972d55e1ad808659a71fc9b1 684 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 414 1.6E-41 T 11-10-2018 IPR000160 GGDEF domain AYJ52_07940 ab65a368972d55e1ad808659a71fc9b1 684 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 417 6.7E-38 T 11-10-2018 IPR000160 GGDEF domain AYJ52_07940 ab65a368972d55e1ad808659a71fc9b1 684 Gene3D G3DSA:3.20.20.450 432 679 1.3E-91 T 11-10-2018 IPR035919 EAL domain superfamily AYJ52_07940 ab65a368972d55e1ad808659a71fc9b1 684 Gene3D G3DSA:3.30.70.270 252 431 3.3E-52 T 11-10-2018 AYJ52_07940 ab65a368972d55e1ad808659a71fc9b1 684 Pfam PF00563 EAL domain 435 669 1.9E-70 T 11-10-2018 IPR001633 EAL domain AYJ52_07940 ab65a368972d55e1ad808659a71fc9b1 684 SUPERFAMILY SSF141868 435 677 5.23E-85 T 11-10-2018 IPR035919 EAL domain superfamily AYJ52_10705 1927280d2b1eae0b871e3e5fef136eae 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 342 4.9E-35 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_10705 1927280d2b1eae0b871e3e5fef136eae 350 SUPERFAMILY SSF161098 111 328 1.83E-14 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_10705 1927280d2b1eae0b871e3e5fef136eae 350 Gene3D G3DSA:1.10.3720.10 105 339 6.1E-19 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_02410 2e7d8052a03e60986659c9d18626301c 647 Gene3D G3DSA:1.25.20.10 24 383 7.9E-52 T 11-10-2018 AYJ52_02410 2e7d8052a03e60986659c9d18626301c 647 Pfam PF01464 Transglycosylase SLT domain 489 591 2.4E-20 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AYJ52_02410 2e7d8052a03e60986659c9d18626301c 647 SUPERFAMILY SSF48435 26 477 1.44E-85 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AYJ52_02410 2e7d8052a03e60986659c9d18626301c 647 SUPERFAMILY SSF53955 485 638 2.36E-40 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_02410 2e7d8052a03e60986659c9d18626301c 647 Gene3D G3DSA:1.10.530.10 474 640 3.9E-39 T 11-10-2018 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 SUPERFAMILY SSF56425 246 364 3.44E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 Pfam PF02910 Fumarate reductase flavoprotein C-term 475 610 2.3E-34 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 19 606 2.0E-230 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 Gene3D G3DSA:3.90.700.10 256 359 2.4E-162 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 PIRSF PIRSF000171 8 592 9.5E-35 T 11-10-2018 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 SUPERFAMILY SSF51905 11 444 2.37E-81 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_00760 61079dd539502a38596a82017ce534e2 611 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 17 611 3.9E-266 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 Gene3D G3DSA:1.20.58.100 446 559 3.4E-31 T 11-10-2018 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 53 62 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 SUPERFAMILY SSF46977 465 611 1.1E-38 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 Gene3D G3DSA:4.10.80.40 571 611 3.0E-5 T 11-10-2018 AYJ52_00760 61079dd539502a38596a82017ce534e2 611 Gene3D G3DSA:3.50.50.60 19 427 2.4E-162 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_00760 61079dd539502a38596a82017ce534e2 611 Pfam PF00890 FAD binding domain 19 416 1.3E-116 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_05115 8e43cf9e58a8f250a7f0bfbe688133df 116 SMART SM00248 29 58 2600.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AYJ52_05115 8e43cf9e58a8f250a7f0bfbe688133df 116 SMART SM00248 62 91 7.5E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AYJ52_05115 8e43cf9e58a8f250a7f0bfbe688133df 116 Pfam PF12796 Ankyrin repeats (3 copies) 37 113 3.0E-13 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain AYJ52_05115 8e43cf9e58a8f250a7f0bfbe688133df 116 Gene3D G3DSA:1.25.40.20 16 116 3.3E-20 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AYJ52_05115 8e43cf9e58a8f250a7f0bfbe688133df 116 SUPERFAMILY SSF48403 33 114 2.95E-19 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AYJ52_06425 a9b355f921cb05d63b3d176f3ded1863 270 Pfam PF10411 Disulfide bond isomerase protein N-terminus 62 115 3.8E-14 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AYJ52_06425 a9b355f921cb05d63b3d176f3ded1863 270 Gene3D G3DSA:3.10.450.70 57 119 2.2E-7 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AYJ52_06425 a9b355f921cb05d63b3d176f3ded1863 270 SUPERFAMILY SSF52833 130 270 6.26E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_06425 a9b355f921cb05d63b3d176f3ded1863 270 Gene3D G3DSA:3.40.30.10 120 270 3.0E-40 T 11-10-2018 AYJ52_06425 a9b355f921cb05d63b3d176f3ded1863 270 SUPERFAMILY SSF54423 63 116 1.44E-9 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AYJ52_06425 a9b355f921cb05d63b3d176f3ded1863 270 Pfam PF13098 Thioredoxin-like domain 147 268 5.0E-26 T 11-10-2018 IPR012336 Thioredoxin-like fold AYJ52_14605 57d1f3a606c705b34b4e0eebb4025826 254 SUPERFAMILY SSF52540 2 215 4.28E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_14605 57d1f3a606c705b34b4e0eebb4025826 254 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_14605 57d1f3a606c705b34b4e0eebb4025826 254 Gene3D G3DSA:3.40.50.300 1 248 5.7E-62 T 11-10-2018 AYJ52_14605 57d1f3a606c705b34b4e0eebb4025826 254 Pfam PF00005 ABC transporter 17 164 4.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_14605 57d1f3a606c705b34b4e0eebb4025826 254 SMART SM00382 26 212 6.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 Gene3D G3DSA:1.10.287.110 1 114 1.5E-40 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 Pfam PF01556 DnaJ C terminal domain 121 332 8.4E-41 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 41.175 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 1.1E-140 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 Gene3D G3DSA:2.10.230.10 147 207 6.9E-37 T 11-10-2018 AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 SUPERFAMILY SSF49493 113 260 1.16E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 Pfam PF00226 DnaJ domain 5 67 4.0E-30 T 11-10-2018 IPR001623 DnaJ domain AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 SUPERFAMILY SSF46565 1 106 7.85E-38 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 SMART SM00271 4 62 1.5E-35 T 11-10-2018 IPR001623 DnaJ domain AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 SUPERFAMILY SSF49493 258 343 7.85E-22 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 Gene3D G3DSA:2.60.260.20 253 364 4.4E-28 T 11-10-2018 AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 SUPERFAMILY SSF57938 134 209 1.57E-21 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 PRINTS PR00625 DnaJ domain signature 62 81 3.6E-34 T 11-10-2018 IPR001623 DnaJ domain AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 PRINTS PR00625 DnaJ domain signature 7 25 3.6E-34 T 11-10-2018 IPR001623 DnaJ domain AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 PRINTS PR00625 DnaJ domain signature 42 62 3.6E-34 T 11-10-2018 IPR001623 DnaJ domain AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 PRINTS PR00625 DnaJ domain signature 25 40 3.6E-34 T 11-10-2018 IPR001623 DnaJ domain AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 Gene3D G3DSA:2.60.260.20 117 248 6.9E-37 T 11-10-2018 AYJ52_04745 b5fdeb50224b8aab2a9313b1097420cc 370 Pfam PF00684 DnaJ central domain 147 207 9.9E-14 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AYJ52_06035 7a87f95f525518d737fe4aab04289d0a 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 235 1.9E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_06035 7a87f95f525518d737fe4aab04289d0a 239 SUPERFAMILY SSF46894 147 236 2.38E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_06035 7a87f95f525518d737fe4aab04289d0a 239 SUPERFAMILY SSF52172 2 129 2.56E-39 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_06035 7a87f95f525518d737fe4aab04289d0a 239 SMART SM00448 4 114 7.8E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_06035 7a87f95f525518d737fe4aab04289d0a 239 Gene3D G3DSA:1.10.10.10 147 238 2.8E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_06035 7a87f95f525518d737fe4aab04289d0a 239 SMART SM00862 159 235 1.7E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_06035 7a87f95f525518d737fe4aab04289d0a 239 Pfam PF00072 Response regulator receiver domain 6 115 8.3E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_06035 7a87f95f525518d737fe4aab04289d0a 239 Gene3D G3DSA:3.40.50.2300 1 123 1.0E-34 T 11-10-2018 AYJ52_12165 acec4132d91793d5a0386c0913b6a816 312 Pfam PF05138 Phenylacetic acid catabolic protein 18 292 2.5E-103 T 11-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AYJ52_12165 acec4132d91793d5a0386c0913b6a816 312 Gene3D G3DSA:1.20.1260.10 2 310 5.5E-137 T 11-10-2018 IPR012347 Ferritin-like AYJ52_12165 acec4132d91793d5a0386c0913b6a816 312 SUPERFAMILY SSF47240 28 270 8.52E-85 T 11-10-2018 IPR009078 Ferritin-like superfamily AYJ52_12165 acec4132d91793d5a0386c0913b6a816 312 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 8 296 2.9E-157 T 11-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 AYJ52_17385 81a927ac8151229b55118304583b8ad6 298 Pfam PF00293 NUDIX domain 8 125 2.0E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_17385 81a927ac8151229b55118304583b8ad6 298 Pfam PF02581 Thiamine monophosphate synthase 161 297 4.8E-18 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_17385 81a927ac8151229b55118304583b8ad6 298 Gene3D G3DSA:3.90.79.10 3 128 8.3E-28 T 11-10-2018 AYJ52_17385 81a927ac8151229b55118304583b8ad6 298 PRINTS PR00502 NUDIX hydrolase family signature 34 48 4.7E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AYJ52_17385 81a927ac8151229b55118304583b8ad6 298 PRINTS PR00502 NUDIX hydrolase family signature 48 63 4.7E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AYJ52_17385 81a927ac8151229b55118304583b8ad6 298 Gene3D G3DSA:3.20.20.70 142 298 1.9E-26 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_17385 81a927ac8151229b55118304583b8ad6 298 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AYJ52_17385 81a927ac8151229b55118304583b8ad6 298 SUPERFAMILY SSF55811 3 126 1.62E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_17385 81a927ac8151229b55118304583b8ad6 298 SUPERFAMILY SSF51391 115 297 3.4E-24 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_08405 df9a9f6162de2f4e2e6a2987e7ab2ac2 264 Gene3D G3DSA:3.20.20.150 1 262 1.9E-64 T 11-10-2018 AYJ52_08405 df9a9f6162de2f4e2e6a2987e7ab2ac2 264 SUPERFAMILY SSF51658 1 258 2.63E-68 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AYJ52_08405 df9a9f6162de2f4e2e6a2987e7ab2ac2 264 Pfam PF01261 Xylose isomerase-like TIM barrel 21 210 1.6E-23 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AYJ52_08405 df9a9f6162de2f4e2e6a2987e7ab2ac2 264 PIRSF PIRSF006241 1 261 7.5E-90 T 11-10-2018 IPR026040 Hydroxypyruvate isomerase-like AYJ52_03085 e7fa46ccab3fb5bdaad39859514b4ded 343 Pfam PF03280 Proteobacterial lipase chaperone protein 132 322 2.7E-49 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AYJ52_03085 e7fa46ccab3fb5bdaad39859514b4ded 343 SUPERFAMILY SSF158855 61 334 7.06E-86 T 11-10-2018 AYJ52_03085 e7fa46ccab3fb5bdaad39859514b4ded 343 Hamap MF_00790 Lipase chaperone [lifO]. 6 331 19.066 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AYJ52_13315 ac492070a2dd9721b35a9819f773612d 232 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 3 232 48.773 T 11-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AYJ52_13315 ac492070a2dd9721b35a9819f773612d 232 Gene3D G3DSA:3.30.1600.10 18 154 2.4E-64 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AYJ52_13315 ac492070a2dd9721b35a9819f773612d 232 Gene3D G3DSA:3.40.50.1220 5 205 2.4E-64 T 11-10-2018 AYJ52_13315 ac492070a2dd9721b35a9819f773612d 232 SUPERFAMILY SSF52467 3 230 1.66E-65 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AYJ52_13315 ac492070a2dd9721b35a9819f773612d 232 Pfam PF02146 Sir2 family 9 182 2.5E-46 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 AYJ52_10930 4fe1b96cf45e0460c420156ba66d12d5 298 Pfam PF00892 EamA-like transporter family 160 284 2.5E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_10930 4fe1b96cf45e0460c420156ba66d12d5 298 Pfam PF00892 EamA-like transporter family 17 146 6.1E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_10930 4fe1b96cf45e0460c420156ba66d12d5 298 SUPERFAMILY SSF103481 190 285 2.48E-14 T 11-10-2018 AYJ52_10930 4fe1b96cf45e0460c420156ba66d12d5 298 SUPERFAMILY SSF103481 50 150 2.22E-16 T 11-10-2018 AYJ52_17895 56d42bb0cfd3b4f8324e5a0ef18d4e41 615 Gene3D G3DSA:3.40.50.12780 23 410 3.6E-88 T 11-10-2018 AYJ52_17895 56d42bb0cfd3b4f8324e5a0ef18d4e41 615 SUPERFAMILY SSF56801 18 517 3.66E-116 T 11-10-2018 AYJ52_17895 56d42bb0cfd3b4f8324e5a0ef18d4e41 615 Pfam PF00501 AMP-binding enzyme 32 417 3.7E-70 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_17895 56d42bb0cfd3b4f8324e5a0ef18d4e41 615 Pfam PF13193 AMP-binding enzyme C-terminal domain 426 505 5.9E-8 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_17895 56d42bb0cfd3b4f8324e5a0ef18d4e41 615 Gene3D G3DSA:3.30.300.30 414 540 7.3E-23 T 11-10-2018 AYJ52_17895 56d42bb0cfd3b4f8324e5a0ef18d4e41 615 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_06845 2873d05599662c6773c009fc48b230ef 304 SUPERFAMILY SSF103481 41 138 3.01E-10 T 11-10-2018 AYJ52_06845 2873d05599662c6773c009fc48b230ef 304 Pfam PF00892 EamA-like transporter family 151 282 1.2E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_06845 2873d05599662c6773c009fc48b230ef 304 Pfam PF00892 EamA-like transporter family 7 138 4.2E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_16455 ab08f7f58e906684d9fd0a75dc8ed6c5 147 SUPERFAMILY SSF55729 1 140 5.16E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_16455 ab08f7f58e906684d9fd0a75dc8ed6c5 147 PIRSF PIRSF037663 1 143 7.1E-11 T 11-10-2018 IPR017255 Acetyltransferase, GNAT, predicted AYJ52_16455 ab08f7f58e906684d9fd0a75dc8ed6c5 147 Pfam PF00583 Acetyltransferase (GNAT) family 33 133 5.1E-16 T 11-10-2018 IPR000182 GNAT domain AYJ52_16455 ab08f7f58e906684d9fd0a75dc8ed6c5 147 Gene3D G3DSA:3.40.630.30 2 139 1.3E-34 T 11-10-2018 AYJ52_16910 15f633249ecf4dd9b5a3ef2591e97dc7 282 SUPERFAMILY SSF51197 1 281 1.79E-85 T 11-10-2018 AYJ52_16910 15f633249ecf4dd9b5a3ef2591e97dc7 282 Gene3D G3DSA:3.60.130.10 1 282 2.0E-81 T 11-10-2018 AYJ52_16910 15f633249ecf4dd9b5a3ef2591e97dc7 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 3 274 6.4E-60 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AYJ52_10330 c90d90b79008142943fbf1aacadb6820 212 Gene3D G3DSA:2.60.300.12 16 113 1.5E-8 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AYJ52_10330 c90d90b79008142943fbf1aacadb6820 212 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 18 211 9.4E-87 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AYJ52_10330 c90d90b79008142943fbf1aacadb6820 212 Pfam PF01106 NifU-like domain 127 198 3.0E-20 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AYJ52_10330 c90d90b79008142943fbf1aacadb6820 212 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 16 211 40.881 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AYJ52_10330 c90d90b79008142943fbf1aacadb6820 212 SUPERFAMILY SSF117916 111 204 3.27E-21 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AYJ52_10330 c90d90b79008142943fbf1aacadb6820 212 SUPERFAMILY SSF89360 14 110 2.35E-19 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AYJ52_10330 c90d90b79008142943fbf1aacadb6820 212 Gene3D G3DSA:3.30.300.130 121 210 3.0E-20 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AYJ52_10330 c90d90b79008142943fbf1aacadb6820 212 Pfam PF01521 Iron-sulphur cluster biosynthesis 17 112 1.5E-7 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AYJ52_10330 c90d90b79008142943fbf1aacadb6820 212 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 134 198 1.0E-29 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AYJ52_05250 57e7918fdf9e678b60c2fb8ee6638ecc 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.3E-23 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_05250 57e7918fdf9e678b60c2fb8ee6638ecc 238 Gene3D G3DSA:3.30.230.70 10 237 1.7E-63 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_05250 57e7918fdf9e678b60c2fb8ee6638ecc 238 SUPERFAMILY SSF54211 1 181 5.57E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_05250 57e7918fdf9e678b60c2fb8ee6638ecc 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site AYJ52_05250 57e7918fdf9e678b60c2fb8ee6638ecc 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.958 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AYJ52_05250 57e7918fdf9e678b60c2fb8ee6638ecc 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 3.4E-115 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AYJ52_05250 57e7918fdf9e678b60c2fb8ee6638ecc 238 SUPERFAMILY SSF55666 153 236 5.37E-24 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_05250 57e7918fdf9e678b60c2fb8ee6638ecc 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 1.3E-9 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AYJ52_11270 d091506ce5cd0a4d8d34253d735c7470 238 SUPERFAMILY SSF53335 45 235 3.13E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_11270 d091506ce5cd0a4d8d34253d735c7470 238 Gene3D G3DSA:3.40.50.150 34 238 3.0E-57 T 11-10-2018 AYJ52_11270 d091506ce5cd0a4d8d34253d735c7470 238 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 26 237 28.906 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AYJ52_11270 d091506ce5cd0a4d8d34253d735c7470 238 Pfam PF02390 Putative methyltransferase 64 230 2.3E-50 T 11-10-2018 AYJ52_11270 d091506ce5cd0a4d8d34253d735c7470 238 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 59 237 2.0E-52 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 Pfam PF02803 Thiolase, C-terminal domain 275 398 1.1E-45 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 Gene3D G3DSA:3.40.47.10 140 397 2.2E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 PIRSF PIRSF000429 1 401 2.4E-129 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 SUPERFAMILY SSF53901 3 275 1.25E-72 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 Gene3D G3DSA:3.40.47.10 6 281 2.2E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 1.6E-136 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 Pfam PF00108 Thiolase, N-terminal domain 5 267 8.1E-71 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AYJ52_12345 140c03bdfad9f87b3df5599eedd06530 401 SUPERFAMILY SSF53901 276 399 4.16E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 SMART SM01097 3 136 1.1E-91 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 Pfam PF00117 Glutamine amidotransferase class-I 196 372 1.1E-46 T 11-10-2018 IPR017926 Glutamine amidotransferase AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00097 Anthranilate synthase component II signature 235 244 1.5E-5 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 4.8E-11 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 Gene3D G3DSA:3.50.30.20 3 154 3.7E-59 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 135 1.7E-52 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 1.1E-143 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 SUPERFAMILY SSF52021 4 143 5.23E-56 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 SUPERFAMILY SSF52317 157 376 7.15E-60 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 3.6E-39 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 3.6E-39 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 3.6E-39 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 3.6E-39 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 3.6E-39 T 11-10-2018 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 47.311 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_00630 e3e37a9f081c7e0ee8ae5ea963c1a226 379 Gene3D G3DSA:3.40.50.880 155 377 1.8E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_18950 faa6c5d0c72694e7e607a0cb9941488e 622 Gene3D G3DSA:2.70.70.10 41 178 5.5E-28 T 11-10-2018 IPR011055 Duplicated hybrid motif AYJ52_18950 faa6c5d0c72694e7e607a0cb9941488e 622 Pfam PF01551 Peptidase family M23 73 162 1.4E-19 T 11-10-2018 IPR016047 Peptidase M23 AYJ52_18950 faa6c5d0c72694e7e607a0cb9941488e 622 SUPERFAMILY SSF51261 30 163 1.94E-29 T 11-10-2018 IPR011055 Duplicated hybrid motif AYJ52_18950 faa6c5d0c72694e7e607a0cb9941488e 622 Gene3D G3DSA:1.10.530.10 449 565 5.9E-11 T 11-10-2018 AYJ52_10720 bb1ea52bd4cfc3245702ce2df2aed526 414 Gene3D G3DSA:3.20.20.70 1 350 1.0E-115 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_10720 bb1ea52bd4cfc3245702ce2df2aed526 414 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 341 3.8E-60 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AYJ52_10720 bb1ea52bd4cfc3245702ce2df2aed526 414 SUPERFAMILY SSF51395 1 348 3.91E-104 T 11-10-2018 AYJ52_08620 5190c2ae057b5705da0bbd5b173d7e79 305 SUPERFAMILY SSF82689 183 277 4.45E-20 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AYJ52_08620 5190c2ae057b5705da0bbd5b173d7e79 305 SUPERFAMILY SSF82861 27 109 1.44E-8 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AYJ52_08620 5190c2ae057b5705da0bbd5b173d7e79 305 Gene3D G3DSA:2.30.30.60 127 180 1.1E-8 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AYJ52_08620 5190c2ae057b5705da0bbd5b173d7e79 305 Pfam PF00924 Mechanosensitive ion channel 70 270 3.5E-42 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AYJ52_08620 5190c2ae057b5705da0bbd5b173d7e79 305 Gene3D G3DSA:3.30.70.100 182 275 4.2E-19 T 11-10-2018 AYJ52_08620 5190c2ae057b5705da0bbd5b173d7e79 305 SUPERFAMILY SSF50182 112 181 9.7E-13 T 11-10-2018 IPR010920 LSM domain superfamily AYJ52_03240 0b34397974d9be8d343b52c98191c800 189 ProSitePatterns PS01128 Shikimate kinase signature. 74 99 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AYJ52_03240 0b34397974d9be8d343b52c98191c800 189 SUPERFAMILY SSF52540 20 183 6.88E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_03240 0b34397974d9be8d343b52c98191c800 189 Hamap MF_00109 Shikimate kinase [aroK]. 18 184 29.822 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AYJ52_03240 0b34397974d9be8d343b52c98191c800 189 PRINTS PR01100 Shikimate kinase family signature 91 100 1.3E-25 T 11-10-2018 AYJ52_03240 0b34397974d9be8d343b52c98191c800 189 PRINTS PR01100 Shikimate kinase family signature 21 36 1.3E-25 T 11-10-2018 AYJ52_03240 0b34397974d9be8d343b52c98191c800 189 PRINTS PR01100 Shikimate kinase family signature 112 129 1.3E-25 T 11-10-2018 AYJ52_03240 0b34397974d9be8d343b52c98191c800 189 PRINTS PR01100 Shikimate kinase family signature 73 81 1.3E-25 T 11-10-2018 AYJ52_03240 0b34397974d9be8d343b52c98191c800 189 PRINTS PR01100 Shikimate kinase family signature 45 58 1.3E-25 T 11-10-2018 AYJ52_03240 0b34397974d9be8d343b52c98191c800 189 Gene3D G3DSA:3.40.50.300 11 189 1.9E-59 T 11-10-2018 AYJ52_03240 0b34397974d9be8d343b52c98191c800 189 Pfam PF01202 Shikimate kinase 27 183 2.4E-53 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 2.9E-8 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 2.9E-8 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 101 110 2.9E-8 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 2.9E-8 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 280 1.4E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 Gene3D G3DSA:3.30.413.10 629 794 2.7E-32 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 Gene3D G3DSA:3.50.50.60 4 278 3.6E-88 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 SUPERFAMILY SSF51905 2 186 5.01E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.0E-14 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 1.0E-14 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 1.0E-14 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 1.0E-14 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 SUPERFAMILY SSF51905 145 305 1.14E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PIRSF PIRSF037149 1 836 0.0 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 Pfam PF04324 BFD-like [2Fe-2S] binding domain 421 469 4.6E-10 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 Gene3D G3DSA:3.50.50.60 106 241 3.6E-88 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 630 745 1.1E-14 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 SUPERFAMILY SSF55124 500 639 4.09E-24 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 3 798 0.0 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 Gene3D G3DSA:1.10.10.1100 421 475 1.4E-11 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 677 693 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 558 621 8.4E-9 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 SUPERFAMILY SSF56014 631 804 2.62E-49 T 11-10-2018 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PRINTS PR00397 Sirohaem Fe-binding site signature 677 695 5.0E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_15880 e5bec006fe80862a4d4c5fbf95576e5c 848 PRINTS PR00397 Sirohaem Fe-binding site signature 634 652 5.0E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AYJ52_14200 6d54446cb830a2a84813bcf6df3710d2 416 Pfam PF01738 Dienelactone hydrolase family 16 232 1.2E-47 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AYJ52_14200 6d54446cb830a2a84813bcf6df3710d2 416 Gene3D G3DSA:3.10.450.50 240 378 2.7E-21 T 11-10-2018 AYJ52_14200 6d54446cb830a2a84813bcf6df3710d2 416 SUPERFAMILY SSF53474 2 233 2.48E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_14200 6d54446cb830a2a84813bcf6df3710d2 416 SUPERFAMILY SSF54427 239 383 5.7E-23 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_14200 6d54446cb830a2a84813bcf6df3710d2 416 Gene3D G3DSA:3.40.50.1820 2 233 1.1E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10125 27ac568dffc1b35de67c95032007b22c 664 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 37 657 6.9E-266 T 11-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 AYJ52_10125 27ac568dffc1b35de67c95032007b22c 664 Gene3D G3DSA:3.20.20.370 28 296 1.3E-71 T 11-10-2018 AYJ52_10125 27ac568dffc1b35de67c95032007b22c 664 SUPERFAMILY SSF88713 53 280 4.45E-36 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AYJ52_10125 27ac568dffc1b35de67c95032007b22c 664 Gene3D G3DSA:3.20.20.80 302 661 9.7E-140 T 11-10-2018 AYJ52_10125 27ac568dffc1b35de67c95032007b22c 664 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 313 637 1.1E-146 T 11-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal AYJ52_10125 27ac568dffc1b35de67c95032007b22c 664 Pfam PF01522 Polysaccharide deacetylase 94 257 1.2E-25 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AYJ52_02115 c3a1ee825835ad3854bea55b5a4d249c 298 Gene3D G3DSA:3.40.50.1820 15 276 4.3E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_02115 c3a1ee825835ad3854bea55b5a4d249c 298 Gene3D G3DSA:1.10.10.800 141 223 4.3E-45 T 11-10-2018 AYJ52_02115 c3a1ee825835ad3854bea55b5a4d249c 298 SUPERFAMILY SSF53474 4 296 1.11E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_02115 c3a1ee825835ad3854bea55b5a4d249c 298 Pfam PF12146 Serine aminopeptidase, S33 30 259 2.9E-11 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AYJ52_13555 e87e52baa986129b62d8df465a9c03ab 340 Gene3D G3DSA:1.10.10.60 232 340 1.2E-18 T 11-10-2018 AYJ52_13555 e87e52baa986129b62d8df465a9c03ab 340 SMART SM00342 253 335 3.1E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_13555 e87e52baa986129b62d8df465a9c03ab 340 SUPERFAMILY SSF46689 291 337 9.41E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_13555 e87e52baa986129b62d8df465a9c03ab 340 Pfam PF12833 Helix-turn-helix domain 262 336 5.9E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_13555 e87e52baa986129b62d8df465a9c03ab 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 19 203 2.4E-12 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_00625 5d82b8f2e46de6ec6ef2b3d30c19fba2 195 SUPERFAMILY SSF58113 5 152 4.32E-8 T 11-10-2018 AYJ52_00625 5d82b8f2e46de6ec6ef2b3d30c19fba2 195 Gene3D G3DSA:1.20.120.20 2 129 1.9E-12 T 11-10-2018 AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 Pfam PF00005 ABC transporter 340 473 1.3E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 Gene3D G3DSA:3.40.50.300 287 552 2.3E-74 T 11-10-2018 AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 Pfam PF00005 ABC transporter 22 191 1.9E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 551 1.1E-289 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 SUPERFAMILY SSF52540 301 531 3.4E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 Pfam PF12848 ABC transporter 230 303 9.4E-12 T 11-10-2018 IPR032781 ABC-transporter extension domain AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 SMART SM00382 31 236 4.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 SMART SM00382 348 521 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 SUPERFAMILY SSF52540 9 244 7.52E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 Gene3D G3DSA:3.40.50.300 1 286 6.2E-85 T 11-10-2018 AYJ52_03420 4798e0f5dcb2abaebbaacf2acba143a2 553 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 Gene3D G3DSA:3.40.50.2300 1040 1159 1.2E-16 T 11-10-2018 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 SMART SM00387 913 1027 1.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 SMART SM00448 1046 1155 9.2E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 SMART SM00388 804 869 8.0E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 SUPERFAMILY SSF55874 860 1026 5.63E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 Gene3D G3DSA:3.30.450.20 639 769 3.2E-13 T 11-10-2018 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 SUPERFAMILY SSF55785 642 764 1.05E-10 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 914 1024 3.9E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 987 1005 1.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 966 1.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1011 1024 1.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 Gene3D G3DSA:1.10.287.130 770 867 1.0E-11 T 11-10-2018 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 SUPERFAMILY SSF47384 792 869 2.16E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 Pfam PF00072 Response regulator receiver domain 1048 1153 6.8E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 Gene3D G3DSA:1.20.1730.10 38 520 4.3E-18 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 Pfam PF12860 PAS fold 657 770 1.1E-42 T 11-10-2018 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 Gene3D G3DSA:3.30.565.10 868 1028 3.5E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 Pfam PF00512 His Kinase A (phospho-acceptor) domain 804 869 8.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_03975 6f4aa19c8bcd5e5296204f820aa29308 1165 SUPERFAMILY SSF52172 1046 1156 1.42E-14 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 SUPERFAMILY SSF82693 667 851 4.45E-23 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.6E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 SUPERFAMILY SSF82866 297 498 6.54E-52 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 Pfam PF00873 AcrB/AcrD/AcrF family 2 1020 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 SUPERFAMILY SSF82714 720 797 8.89E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 SUPERFAMILY SSF82866 826 1019 1.23E-43 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 SUPERFAMILY SSF82714 184 273 8.11E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 SUPERFAMILY SSF82693 136 330 6.15E-26 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 Gene3D G3DSA:3.30.2090.10 716 804 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 SUPERFAMILY SSF82693 39 130 3.49E-22 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 Gene3D G3DSA:3.30.70.1440 664 860 0.0 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 Gene3D G3DSA:3.30.70.1430 39 812 0.0 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 SUPERFAMILY SSF82693 565 664 1.1E-22 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 Gene3D G3DSA:3.30.70.1430 567 663 0.0 T 11-10-2018 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1031 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AYJ52_14325 ea9ed4bfca30fe7cdabad0744f90f0cd 1035 Gene3D G3DSA:1.20.1640.10 513 1017 0.0 T 11-10-2018 AYJ52_08805 361497f9dbb37009977093816c4c5143 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 7.6E-88 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AYJ52_08805 361497f9dbb37009977093816c4c5143 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AYJ52_08805 361497f9dbb37009977093816c4c5143 228 Gene3D G3DSA:3.20.20.70 6 223 1.6E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_08805 361497f9dbb37009977093816c4c5143 228 SUPERFAMILY SSF51366 4 219 1.99E-74 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AYJ52_08805 361497f9dbb37009977093816c4c5143 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 217 2.5E-96 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AYJ52_08805 361497f9dbb37009977093816c4c5143 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AYJ52_08805 361497f9dbb37009977093816c4c5143 228 PIRSF PIRSF001461 1 228 1.1E-101 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AYJ52_04540 12cf39c2ce7565c83e62c6d55dc9e2d2 470 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_04540 12cf39c2ce7565c83e62c6d55dc9e2d2 470 Gene3D G3DSA:1.20.1740.10 6 469 1.5E-67 T 11-10-2018 AYJ52_04540 12cf39c2ce7565c83e62c6d55dc9e2d2 470 PIRSF PIRSF006060 1 469 2.8E-69 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_04540 12cf39c2ce7565c83e62c6d55dc9e2d2 470 Pfam PF00324 Amino acid permease 15 450 3.3E-106 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_12580 3080c09f932f596ffa99b9b78c970c2d 219 SUPERFAMILY SSF161098 11 213 4.32E-43 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_12580 3080c09f932f596ffa99b9b78c970c2d 219 Gene3D G3DSA:1.10.3720.10 1 215 2.5E-53 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_12580 3080c09f932f596ffa99b9b78c970c2d 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 213 2.6E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_12580 3080c09f932f596ffa99b9b78c970c2d 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 4.7E-31 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 111 1.9E-27 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 SUPERFAMILY SSF46946 128 220 3.27E-29 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 Pfam PF06827 Zinc finger found in FPG and IleRS 239 267 4.3E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 266 1.1E-87 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 267 40.012 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 SUPERFAMILY SSF57716 215 267 2.02E-15 T 11-10-2018 AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 SUPERFAMILY SSF81624 2 136 8.24E-37 T 11-10-2018 IPR035937 MutM-like, N-terminal AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 SMART SM01232 127 219 1.4E-44 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 Gene3D G3DSA:3.20.190.10 2 125 3.1E-35 T 11-10-2018 IPR035937 MutM-like, N-terminal AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 SMART SM00898 2 113 1.1E-45 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 Gene3D G3DSA:1.10.8.50 129 267 5.6E-46 T 11-10-2018 AYJ52_01610 de58d27e515aefb452c0b2b1cfd65e0b 274 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 216 1.1E-26 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AYJ52_03790 6f191c3fcc6f025f9ca35aa4229e5c55 701 Gene3D G3DSA:3.40.50.300 6 177 2.6E-9 T 11-10-2018 AYJ52_03790 6f191c3fcc6f025f9ca35aa4229e5c55 701 Gene3D G3DSA:3.40.50.300 178 356 2.2E-8 T 11-10-2018 AYJ52_03790 6f191c3fcc6f025f9ca35aa4229e5c55 701 SMART SM00487 3 191 3.7E-4 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ52_03790 6f191c3fcc6f025f9ca35aa4229e5c55 701 Pfam PF00271 Helicase conserved C-terminal domain 209 315 3.8E-5 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_03790 6f191c3fcc6f025f9ca35aa4229e5c55 701 SUPERFAMILY SSF52540 25 315 5.45E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07220 f4917568b6dd7eb5c6f110c289a7af91 613 Gene3D G3DSA:3.40.50.12780 34 470 1.7E-61 T 11-10-2018 AYJ52_07220 f4917568b6dd7eb5c6f110c289a7af91 613 SUPERFAMILY SSF56801 50 577 1.31E-95 T 11-10-2018 AYJ52_07220 f4917568b6dd7eb5c6f110c289a7af91 613 ProSitePatterns PS00455 Putative AMP-binding domain signature. 218 229 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_07220 f4917568b6dd7eb5c6f110c289a7af91 613 Pfam PF00501 AMP-binding enzyme 51 477 3.1E-62 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_07220 f4917568b6dd7eb5c6f110c289a7af91 613 Gene3D G3DSA:3.30.300.30 473 581 1.6E-12 T 11-10-2018 AYJ52_07220 f4917568b6dd7eb5c6f110c289a7af91 613 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 565 2.4E-7 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_10875 5d09651fa6a2ff4302f595c9f589ab32 411 Pfam PF00202 Aminotransferase class-III 24 398 1.6E-120 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_10875 5d09651fa6a2ff4302f595c9f589ab32 411 PIRSF PIRSF000521 27 159 4.7E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_10875 5d09651fa6a2ff4302f595c9f589ab32 411 PIRSF PIRSF000521 160 401 6.7E-37 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_10875 5d09651fa6a2ff4302f595c9f589ab32 411 Gene3D G3DSA:3.90.1150.10 24 391 6.7E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_10875 5d09651fa6a2ff4302f595c9f589ab32 411 Gene3D G3DSA:3.40.640.10 58 303 6.7E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_10875 5d09651fa6a2ff4302f595c9f589ab32 411 SUPERFAMILY SSF53383 14 399 1.18E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_10875 5d09651fa6a2ff4302f595c9f589ab32 411 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 6 402 2.7E-218 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AYJ52_10875 5d09651fa6a2ff4302f595c9f589ab32 411 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 68.685 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AYJ52_10875 5d09651fa6a2ff4302f595c9f589ab32 411 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 14 398 9.0E-153 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AYJ52_10875 5d09651fa6a2ff4302f595c9f589ab32 411 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 221 258 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_07890 a397ca0e00b3bc95c7d3b589a3ab4bd2 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 255 6.3E-88 T 11-10-2018 AYJ52_07890 a397ca0e00b3bc95c7d3b589a3ab4bd2 267 Gene3D G3DSA:3.40.50.720 1 267 3.8E-66 T 11-10-2018 AYJ52_07890 a397ca0e00b3bc95c7d3b589a3ab4bd2 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07890 a397ca0e00b3bc95c7d3b589a3ab4bd2 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07890 a397ca0e00b3bc95c7d3b589a3ab4bd2 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07890 a397ca0e00b3bc95c7d3b589a3ab4bd2 267 PIRSF PIRSF000094 3 263 1.6E-113 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AYJ52_07890 a397ca0e00b3bc95c7d3b589a3ab4bd2 267 SUPERFAMILY SSF51735 8 258 1.56E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14825 5d6f7a10832bb5dc56afce62f135a20e 305 Pfam PF03466 LysR substrate binding domain 88 294 2.7E-34 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14825 5d6f7a10832bb5dc56afce62f135a20e 305 SUPERFAMILY SSF53850 89 298 3.72E-36 T 11-10-2018 AYJ52_14825 5d6f7a10832bb5dc56afce62f135a20e 305 Gene3D G3DSA:3.40.190.290 92 294 1.0E-50 T 11-10-2018 AYJ52_14825 5d6f7a10832bb5dc56afce62f135a20e 305 SUPERFAMILY SSF46785 3 88 5.03E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14825 5d6f7a10832bb5dc56afce62f135a20e 305 Gene3D G3DSA:1.10.10.10 2 89 8.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14825 5d6f7a10832bb5dc56afce62f135a20e 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.1E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_05025 f5d16257eb5cbbaf3e548535370c0bb5 373 SUPERFAMILY SSF51246 299 364 4.79E-16 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AYJ52_05025 f5d16257eb5cbbaf3e548535370c0bb5 373 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 4 347 39.306 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AYJ52_05025 f5d16257eb5cbbaf3e548535370c0bb5 373 Pfam PF02222 ATP-grasp domain 106 275 1.4E-56 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AYJ52_05025 f5d16257eb5cbbaf3e548535370c0bb5 373 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 4 351 4.0E-114 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AYJ52_05025 f5d16257eb5cbbaf3e548535370c0bb5 373 SUPERFAMILY SSF56059 97 295 1.66E-63 T 11-10-2018 AYJ52_05025 f5d16257eb5cbbaf3e548535370c0bb5 373 Gene3D G3DSA:3.30.1490.20 102 176 1.5E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AYJ52_05025 f5d16257eb5cbbaf3e548535370c0bb5 373 SUPERFAMILY SSF52440 3 96 7.63E-17 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_05025 f5d16257eb5cbbaf3e548535370c0bb5 373 Gene3D G3DSA:3.40.50.20 1 101 2.5E-27 T 11-10-2018 AYJ52_05025 f5d16257eb5cbbaf3e548535370c0bb5 373 Gene3D G3DSA:3.30.470.20 177 365 5.3E-70 T 11-10-2018 AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 Gene3D G3DSA:4.10.320.10 102 152 5.5E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 SUPERFAMILY SSF47005 114 151 1.03E-9 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 Gene3D G3DSA:2.40.50.100 1 101 9.2E-20 T 11-10-2018 AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 SUPERFAMILY SSF51230 1 95 1.2E-24 T 11-10-2018 IPR011053 Single hybrid motif AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 Pfam PF00364 Biotin-requiring enzyme 4 75 6.5E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 Gene3D G3DSA:3.30.559.10 166 398 3.2E-94 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 397 2.6E-177 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 Pfam PF02817 e3 binding domain 116 146 9.0E-11 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 SUPERFAMILY SSF52777 170 397 1.47E-87 T 11-10-2018 AYJ52_00740 cfc9b32433fe0a00d0a9fba9f6a9c459 398 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 168 395 2.5E-80 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AYJ52_01190 4d07f650c73c84ada69c80341a8daf2e 291 PIRSF PIRSF037798 1 291 9.0E-162 T 11-10-2018 IPR017283 Protein/nucleic acid deglycase HchA GO:0036524 AYJ52_01190 4d07f650c73c84ada69c80341a8daf2e 291 SUPERFAMILY SSF52317 8 288 4.34E-51 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_01190 4d07f650c73c84ada69c80341a8daf2e 291 Pfam PF01965 DJ-1/PfpI family 77 199 1.4E-8 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AYJ52_01190 4d07f650c73c84ada69c80341a8daf2e 291 Gene3D G3DSA:3.40.50.880 6 291 7.2E-77 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_16975 8caca1451dbd571b63d7b71384fcf471 187 PIRSF PIRSF036893 5 187 4.3E-60 T 11-10-2018 IPR022271 Lipocalin, ApoD type AYJ52_16975 8caca1451dbd571b63d7b71384fcf471 187 SUPERFAMILY SSF50814 16 186 1.47E-44 T 11-10-2018 IPR012674 Calycin AYJ52_16975 8caca1451dbd571b63d7b71384fcf471 187 ProSitePatterns PS00213 Lipocalin signature. 40 51 - T 11-10-2018 IPR022272 Lipocalin family conserved site AYJ52_16975 8caca1451dbd571b63d7b71384fcf471 187 PRINTS PR01171 Bacterial lipocalin signature 174 184 2.3E-7 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AYJ52_16975 8caca1451dbd571b63d7b71384fcf471 187 PRINTS PR01171 Bacterial lipocalin signature 147 158 2.3E-7 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AYJ52_16975 8caca1451dbd571b63d7b71384fcf471 187 PRINTS PR01171 Bacterial lipocalin signature 39 53 2.3E-7 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AYJ52_16975 8caca1451dbd571b63d7b71384fcf471 187 Gene3D G3DSA:2.40.128.20 16 186 4.6E-51 T 11-10-2018 IPR012674 Calycin AYJ52_16975 8caca1451dbd571b63d7b71384fcf471 187 Pfam PF08212 Lipocalin-like domain 39 185 4.0E-51 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AYJ52_18140 f8261dee75c0a8595913c7e45c0560d7 706 Pfam PF00563 EAL domain 461 695 2.7E-23 T 11-10-2018 IPR001633 EAL domain AYJ52_18140 f8261dee75c0a8595913c7e45c0560d7 706 Gene3D G3DSA:3.30.450.20 156 263 2.0E-7 T 11-10-2018 AYJ52_18140 f8261dee75c0a8595913c7e45c0560d7 706 SUPERFAMILY SSF141868 461 695 5.89E-27 T 11-10-2018 IPR035919 EAL domain superfamily AYJ52_18140 f8261dee75c0a8595913c7e45c0560d7 706 SMART SM00052 455 701 1.8E-6 T 11-10-2018 IPR001633 EAL domain AYJ52_18140 f8261dee75c0a8595913c7e45c0560d7 706 Gene3D G3DSA:3.20.20.450 458 704 6.8E-27 T 11-10-2018 IPR035919 EAL domain superfamily AYJ52_18140 f8261dee75c0a8595913c7e45c0560d7 706 SUPERFAMILY SSF55785 146 233 3.62E-7 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_07710 4d7d92905543120338cb9dc6f28b0f74 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 65 3.3E-31 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AYJ52_07710 4d7d92905543120338cb9dc6f28b0f74 66 SUPERFAMILY SSF140319 3 64 1.96E-26 T 11-10-2018 IPR036762 IscX-like superfamily AYJ52_07710 4d7d92905543120338cb9dc6f28b0f74 66 PIRSF PIRSF039003 3 66 7.4E-35 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AYJ52_07710 4d7d92905543120338cb9dc6f28b0f74 66 Gene3D G3DSA:1.10.10.600 1 66 2.1E-27 T 11-10-2018 IPR036762 IscX-like superfamily AYJ52_07710 4d7d92905543120338cb9dc6f28b0f74 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 6.1E-31 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AYJ52_02275 4396ac531cd1cde1e8501a2fba62cf81 139 SMART SM00960 20 111 0.0063 T 11-10-2018 IPR004942 Roadblock/LAMTOR2 domain AYJ52_02275 4396ac531cd1cde1e8501a2fba62cf81 139 Gene3D G3DSA:3.30.450.30 23 136 6.8E-17 T 11-10-2018 AYJ52_02275 4396ac531cd1cde1e8501a2fba62cf81 139 SUPERFAMILY SSF103196 26 135 1.15E-14 T 11-10-2018 AYJ52_02275 4396ac531cd1cde1e8501a2fba62cf81 139 Pfam PF03259 Roadblock/LC7 domain 27 99 2.8E-6 T 11-10-2018 IPR004942 Roadblock/LAMTOR2 domain AYJ52_11010 37760bb880cb0408da0d6aab7e0894b6 151 Gene3D G3DSA:1.10.10.10 1 151 2.1E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_11010 37760bb880cb0408da0d6aab7e0894b6 151 SUPERFAMILY SSF46785 14 149 7.37E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_11010 37760bb880cb0408da0d6aab7e0894b6 151 SMART SM00347 34 134 1.1E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_11010 37760bb880cb0408da0d6aab7e0894b6 151 Pfam PF01047 MarR family 41 97 1.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 Gene3D G3DSA:1.20.59.20 199 282 1.6E-15 T 11-10-2018 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 Pfam PF01171 PP-loop family 1 164 6.4E-43 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 SUPERFAMILY SSF56037 302 402 4.18E-15 T 11-10-2018 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 Gene3D G3DSA:3.40.50.620 1 198 9.7E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 337 377 8.4E-13 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 Pfam PF09179 TilS substrate binding domain 212 279 4.3E-11 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 SUPERFAMILY SSF82829 200 282 1.57E-19 T 11-10-2018 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 SUPERFAMILY SSF52402 1 197 6.28E-45 T 11-10-2018 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 Pfam PF11734 TilS substrate C-terminal domain 334 395 1.1E-7 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 1 168 4.2E-44 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 271 17.865 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AYJ52_08595 27c3b345789961402cd5a32c4cf980f7 426 SMART SM00977 333 408 4.5E-8 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 Gene3D G3DSA:1.10.287.130 81 195 1.8E-19 T 11-10-2018 AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 310 1.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 1.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 SMART SM00387 246 354 4.4E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 SUPERFAMILY SSF158472 85 135 4.05E-9 T 11-10-2018 AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 Gene3D G3DSA:3.30.565.10 207 354 4.3E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 Pfam PF00672 HAMP domain 84 133 1.3E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 SUPERFAMILY SSF55874 191 353 5.24E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 352 1.3E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 201 5.0E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 SMART SM00304 83 137 1.6E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 SUPERFAMILY SSF47384 121 203 2.35E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_14340 cdbfc48ecc9c49abf511f7b7690cedcc 354 SMART SM00388 138 202 1.7E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_13750 064a1c3028c78a865680fe4153a02801 320 Gene3D G3DSA:1.10.10.60 207 316 3.8E-26 T 11-10-2018 AYJ52_13750 064a1c3028c78a865680fe4153a02801 320 SUPERFAMILY SSF51182 45 118 4.3E-5 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_13750 064a1c3028c78a865680fe4153a02801 320 Pfam PF12852 Cupin 8 196 1.5E-26 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AYJ52_13750 064a1c3028c78a865680fe4153a02801 320 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 311 1.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_13750 064a1c3028c78a865680fe4153a02801 320 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 295 1.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_13750 064a1c3028c78a865680fe4153a02801 320 SUPERFAMILY SSF46689 212 262 2.2E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_13750 064a1c3028c78a865680fe4153a02801 320 SMART SM00342 228 311 1.3E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_13750 064a1c3028c78a865680fe4153a02801 320 Pfam PF12833 Helix-turn-helix domain 234 313 1.0E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_13750 064a1c3028c78a865680fe4153a02801 320 SUPERFAMILY SSF46689 264 315 6.27E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_00880 65cb9cb00a8dea78508f1f297afe6dc7 266 Gene3D G3DSA:3.30.565.40 58 173 1.2E-13 T 11-10-2018 AYJ52_00880 65cb9cb00a8dea78508f1f297afe6dc7 266 Gene3D G3DSA:3.90.640.20 175 261 3.0E-17 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily AYJ52_00880 65cb9cb00a8dea78508f1f297afe6dc7 266 Pfam PF11738 Protein of unknown function (DUF3298) 179 246 2.4E-9 T 11-10-2018 IPR021729 Domain of unknown function DUF3298 AYJ52_11935 4553617323f33870853faefbf3f33f98 143 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 9 142 2.3E-12 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase AYJ52_11935 4553617323f33870853faefbf3f33f98 143 SUPERFAMILY SSF55961 7 142 2.36E-20 T 11-10-2018 AYJ52_11935 4553617323f33870853faefbf3f33f98 143 Gene3D G3DSA:3.30.530.20 5 143 4.1E-15 T 11-10-2018 IPR023393 START-like domain superfamily AYJ52_09150 bc682c3a1818fa03dde8968eb22f3272 169 Gene3D G3DSA:3.40.30.10 86 168 4.4E-23 T 11-10-2018 AYJ52_09150 bc682c3a1818fa03dde8968eb22f3272 169 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 126 144 - T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09150 bc682c3a1818fa03dde8968eb22f3272 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 26 168 2.8E-46 T 11-10-2018 AYJ52_09150 bc682c3a1818fa03dde8968eb22f3272 169 SUPERFAMILY SSF52833 18 168 5.93E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_09150 bc682c3a1818fa03dde8968eb22f3272 169 PIRSF PIRSF000216 5 169 1.1E-48 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09150 bc682c3a1818fa03dde8968eb22f3272 169 Gene3D G3DSA:1.10.10.1590 16 85 8.8E-16 T 11-10-2018 AYJ52_09150 bc682c3a1818fa03dde8968eb22f3272 169 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 24 168 1.5E-46 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_00070 1b2b412eabc953b12dd5e329a6bca9ac 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 186 3.2E-70 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AYJ52_00070 1b2b412eabc953b12dd5e329a6bca9ac 209 Gene3D G3DSA:3.40.50.170 1 205 1.3E-77 T 11-10-2018 AYJ52_00070 1b2b412eabc953b12dd5e329a6bca9ac 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 184 30.629 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AYJ52_00070 1b2b412eabc953b12dd5e329a6bca9ac 209 SUPERFAMILY SSF53328 3 201 2.09E-62 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AYJ52_00070 1b2b412eabc953b12dd5e329a6bca9ac 209 Pfam PF00551 Formyl transferase 3 177 1.2E-58 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AYJ52_00070 1b2b412eabc953b12dd5e329a6bca9ac 209 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 130 153 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 SUPERFAMILY SSF63411 749 911 3.67E-28 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 Gene3D G3DSA:3.30.830.10 263 456 9.5E-21 T 11-10-2018 AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 Gene3D G3DSA:3.30.830.10 714 914 2.2E-37 T 11-10-2018 AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 Gene3D G3DSA:3.30.830.10 501 713 7.8E-27 T 11-10-2018 AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 SUPERFAMILY SSF63411 487 716 4.89E-32 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 Pfam PF05193 Peptidase M16 inactive domain 202 372 1.5E-15 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 Pfam PF05193 Peptidase M16 inactive domain 667 845 1.6E-26 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 SUPERFAMILY SSF63411 31 244 7.51E-50 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 65 88 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 Pfam PF00675 Insulinase (Peptidase family M16) 64 188 6.5E-17 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 SUPERFAMILY SSF63411 263 433 4.0E-15 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AYJ52_18370 c8d463eb61516b2de073d8c010c70ba4 920 Gene3D G3DSA:3.30.830.10 29 252 1.8E-53 T 11-10-2018 AYJ52_00680 6a0602b549cae62eff089bba119dc0ed 576 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 244 495 3.9E-43 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA AYJ52_00680 6a0602b549cae62eff089bba119dc0ed 576 SMART SM00854 241 496 4.3E-49 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA AYJ52_00680 6a0602b549cae62eff089bba119dc0ed 576 SUPERFAMILY SSF56300 268 496 7.05E-25 T 11-10-2018 AYJ52_18825 b8b9d65976f83855769bbf26852dae56 186 ProSitePatterns PS01068 OmpA-like domain. 110 154 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AYJ52_18825 b8b9d65976f83855769bbf26852dae56 186 Gene3D G3DSA:3.30.1330.60 66 179 4.2E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_18825 b8b9d65976f83855769bbf26852dae56 186 SUPERFAMILY SSF103088 69 176 1.57E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_18825 b8b9d65976f83855769bbf26852dae56 186 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 76 178 1.9E-43 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 AYJ52_18825 b8b9d65976f83855769bbf26852dae56 186 Pfam PF00691 OmpA family 78 172 3.0E-21 T 11-10-2018 IPR006665 OmpA-like domain AYJ52_18825 b8b9d65976f83855769bbf26852dae56 186 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 2 178 29.518 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 AYJ52_18825 b8b9d65976f83855769bbf26852dae56 186 PRINTS PR01021 OMPA domain signature 108 123 5.9E-18 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_18825 b8b9d65976f83855769bbf26852dae56 186 PRINTS PR01021 OMPA domain signature 123 139 5.9E-18 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_18825 b8b9d65976f83855769bbf26852dae56 186 PRINTS PR01021 OMPA domain signature 78 100 5.9E-18 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_08635 eff4e686c59e0b1bf1264b3d18161ef4 143 Pfam PF02566 OsmC-like protein 45 138 8.7E-16 T 11-10-2018 IPR003718 OsmC/Ohr family AYJ52_08635 eff4e686c59e0b1bf1264b3d18161ef4 143 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 4.4E-53 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AYJ52_08635 eff4e686c59e0b1bf1264b3d18161ef4 143 SUPERFAMILY SSF82784 1 140 5.89E-44 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AYJ52_08635 eff4e686c59e0b1bf1264b3d18161ef4 143 Gene3D G3DSA:3.30.300.20 48 141 3.3E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_08635 eff4e686c59e0b1bf1264b3d18161ef4 143 Gene3D G3DSA:2.20.25.10 1 47 3.0E-22 T 11-10-2018 AYJ52_06430 59952ea6c3c860b55aa4c3e5ca02f058 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 21 100 3.5E-15 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AYJ52_06430 59952ea6c3c860b55aa4c3e5ca02f058 306 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 24 305 4.2E-110 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AYJ52_06430 59952ea6c3c860b55aa4c3e5ca02f058 306 Gene3D G3DSA:1.10.150.130 18 109 2.0E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AYJ52_06430 59952ea6c3c860b55aa4c3e5ca02f058 306 Gene3D G3DSA:1.10.443.10 120 300 4.8E-70 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AYJ52_06430 59952ea6c3c860b55aa4c3e5ca02f058 306 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 17 306 55.507 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AYJ52_06430 59952ea6c3c860b55aa4c3e5ca02f058 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 19 306 56.017 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AYJ52_06430 59952ea6c3c860b55aa4c3e5ca02f058 306 SUPERFAMILY SSF56349 21 297 3.53E-60 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AYJ52_06430 59952ea6c3c860b55aa4c3e5ca02f058 306 Pfam PF00589 Phage integrase family 123 291 8.1E-53 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AYJ52_04930 228122c1e01911bba2b0e441fe14f660 106 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 24.264 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AYJ52_04930 228122c1e01911bba2b0e441fe14f660 106 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 1.0E-21 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AYJ52_04930 228122c1e01911bba2b0e441fe14f660 106 Pfam PF01809 Haemolytic domain 4 68 1.1E-29 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AYJ52_04930 228122c1e01911bba2b0e441fe14f660 106 SMART SM01234 1 68 2.5E-44 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AYJ52_04930 228122c1e01911bba2b0e441fe14f660 106 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 8 72 1.5E-28 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AYJ52_08280 43118779111705b14664816bddde1355 457 SUPERFAMILY SSF55874 294 447 1.96E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_08280 43118779111705b14664816bddde1355 457 SMART SM00387 348 457 6.5E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_08280 43118779111705b14664816bddde1355 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 305 1.7E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_08280 43118779111705b14664816bddde1355 457 SMART SM00388 239 305 1.5E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_08280 43118779111705b14664816bddde1355 457 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 9 455 2.5E-140 T 11-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AYJ52_08280 43118779111705b14664816bddde1355 457 SUPERFAMILY SSF158472 188 235 4.97E-6 T 11-10-2018 AYJ52_08280 43118779111705b14664816bddde1355 457 Pfam PF00672 HAMP domain 185 234 7.5E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_08280 43118779111705b14664816bddde1355 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 446 4.0E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_08280 43118779111705b14664816bddde1355 457 SMART SM00304 185 238 1.7E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_08280 43118779111705b14664816bddde1355 457 Gene3D G3DSA:1.10.287.130 189 305 1.7E-23 T 11-10-2018 AYJ52_08280 43118779111705b14664816bddde1355 457 Gene3D G3DSA:3.30.565.10 310 457 1.1E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_08280 43118779111705b14664816bddde1355 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 1.4E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_08280 43118779111705b14664816bddde1355 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.4E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_08280 43118779111705b14664816bddde1355 457 SUPERFAMILY SSF47384 222 305 2.55E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_04975 a8f7831f42611610a34f2f0e54be99e4 351 SUPERFAMILY SSF55961 144 345 7.69E-27 T 11-10-2018 AYJ52_04975 a8f7831f42611610a34f2f0e54be99e4 351 Pfam PF00355 Rieske [2Fe-2S] domain 29 113 7.8E-21 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AYJ52_04975 a8f7831f42611610a34f2f0e54be99e4 351 SUPERFAMILY SSF50022 17 136 6.81E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_04975 a8f7831f42611610a34f2f0e54be99e4 351 Gene3D G3DSA:3.30.530.90 175 348 6.8E-8 T 11-10-2018 AYJ52_04975 a8f7831f42611610a34f2f0e54be99e4 351 Gene3D G3DSA:2.102.10.10 26 158 4.9E-35 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_17195 aa402ac590e7d339d5cd9d037cf515fb 513 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 467 44.684 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AYJ52_17195 aa402ac590e7d339d5cd9d037cf515fb 513 Gene3D G3DSA:3.60.20.10 2 468 6.6E-150 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_17195 aa402ac590e7d339d5cd9d037cf515fb 513 PIRSF PIRSF000485 1 484 1.0E-162 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AYJ52_17195 aa402ac590e7d339d5cd9d037cf515fb 513 Pfam PF13522 Glutamine amidotransferase domain 65 208 6.6E-16 T 11-10-2018 AYJ52_17195 aa402ac590e7d339d5cd9d037cf515fb 513 SUPERFAMILY SSF56235 2 258 6.09E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_17195 aa402ac590e7d339d5cd9d037cf515fb 513 Pfam PF00156 Phosphoribosyl transferase domain 276 395 8.7E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AYJ52_17195 aa402ac590e7d339d5cd9d037cf515fb 513 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 467 4.7E-156 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AYJ52_17195 aa402ac590e7d339d5cd9d037cf515fb 513 Gene3D G3DSA:3.40.50.2020 276 446 6.6E-150 T 11-10-2018 AYJ52_17195 aa402ac590e7d339d5cd9d037cf515fb 513 SUPERFAMILY SSF53271 251 486 2.81E-71 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AYJ52_12125 24197606c427d44ba248f4255cecaeed 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 82 7.1E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12125 24197606c427d44ba248f4255cecaeed 491 Gene3D G3DSA:1.10.10.10 15 86 2.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12125 24197606c427d44ba248f4255cecaeed 491 SUPERFAMILY SSF46785 23 85 5.97E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12125 24197606c427d44ba248f4255cecaeed 491 Pfam PF00155 Aminotransferase class I and II 164 431 6.2E-18 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_12125 24197606c427d44ba248f4255cecaeed 491 SMART SM00345 23 82 5.1E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12125 24197606c427d44ba248f4255cecaeed 491 Gene3D G3DSA:3.40.640.10 119 484 6.4E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_12125 24197606c427d44ba248f4255cecaeed 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 3.2E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12125 24197606c427d44ba248f4255cecaeed 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 3.2E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12125 24197606c427d44ba248f4255cecaeed 491 SUPERFAMILY SSF53383 123 486 5.75E-80 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_13110 ad2fa6cb53265e38445f52c8a0b348df 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.4E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_13110 ad2fa6cb53265e38445f52c8a0b348df 294 Pfam PF03466 LysR substrate binding domain 90 293 2.9E-24 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_13110 ad2fa6cb53265e38445f52c8a0b348df 294 Gene3D G3DSA:3.40.190.290 94 289 1.2E-26 T 11-10-2018 AYJ52_13110 ad2fa6cb53265e38445f52c8a0b348df 294 SUPERFAMILY SSF53850 91 293 1.41E-23 T 11-10-2018 AYJ52_13110 ad2fa6cb53265e38445f52c8a0b348df 294 Gene3D G3DSA:1.10.10.10 1 87 2.4E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_13110 ad2fa6cb53265e38445f52c8a0b348df 294 SUPERFAMILY SSF46785 5 85 1.77E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_17995 995e7d07bc962b858102789f32279f21 279 Pfam PF04909 Amidohydrolase 11 276 4.9E-34 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AYJ52_17995 995e7d07bc962b858102789f32279f21 279 Gene3D G3DSA:3.20.20.140 1 278 1.1E-64 T 11-10-2018 AYJ52_17995 995e7d07bc962b858102789f32279f21 279 SUPERFAMILY SSF51556 5 275 6.09E-60 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 Gene3D G3DSA:1.10.260.30 310 447 2.3E-37 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.5E-22 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 Pfam PF02978 Signal peptide binding domain 329 429 9.1E-30 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 SMART SM00963 1 86 1.3E-36 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 Gene3D G3DSA:1.20.120.140 5 305 7.6E-122 T 11-10-2018 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 431 8.3E-175 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 Gene3D G3DSA:3.40.50.300 90 285 7.6E-122 T 11-10-2018 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 1.6E-72 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 SMART SM00382 99 252 1.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 SUPERFAMILY SSF47446 298 432 1.23E-43 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 442 33.72 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 SUPERFAMILY SSF52540 42 351 2.04E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09350 efcd7e67a552db5cba4ccd4166d76673 470 SMART SM00962 100 296 3.8E-112 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AYJ52_03155 ea22ffabaa7f5af2e900d03068a3e9af 209 Gene3D G3DSA:3.30.63.10 34 93 8.2E-66 T 11-10-2018 AYJ52_03155 ea22ffabaa7f5af2e900d03068a3e9af 209 SUPERFAMILY SSF52540 2 183 1.24E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_03155 ea22ffabaa7f5af2e900d03068a3e9af 209 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.604 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AYJ52_03155 ea22ffabaa7f5af2e900d03068a3e9af 209 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AYJ52_03155 ea22ffabaa7f5af2e900d03068a3e9af 209 Gene3D G3DSA:3.40.50.300 7 180 8.2E-66 T 11-10-2018 AYJ52_03155 ea22ffabaa7f5af2e900d03068a3e9af 209 SMART SM00072 2 184 1.6E-63 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AYJ52_03155 ea22ffabaa7f5af2e900d03068a3e9af 209 Pfam PF00625 Guanylate kinase 6 182 2.2E-52 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AYJ52_03155 ea22ffabaa7f5af2e900d03068a3e9af 209 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 8.0E-74 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AYJ52_14060 b3c9dad0a6faa9435a73575591c1774b 334 Gene3D G3DSA:3.40.50.720 6 319 1.0E-75 T 11-10-2018 AYJ52_14060 b3c9dad0a6faa9435a73575591c1774b 334 SUPERFAMILY SSF55347 149 310 5.62E-36 T 11-10-2018 AYJ52_14060 b3c9dad0a6faa9435a73575591c1774b 334 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 140 9.2E-11 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AYJ52_14060 b3c9dad0a6faa9435a73575591c1774b 334 Pfam PF00742 Homoserine dehydrogenase 149 325 1.8E-43 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AYJ52_14060 b3c9dad0a6faa9435a73575591c1774b 334 Gene3D G3DSA:3.30.360.10 149 311 1.0E-75 T 11-10-2018 AYJ52_14060 b3c9dad0a6faa9435a73575591c1774b 334 PIRSF PIRSF036497 1 332 7.7E-71 T 11-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AYJ52_14060 b3c9dad0a6faa9435a73575591c1774b 334 SUPERFAMILY SSF51735 1 170 1.11E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_08840 1ff60c4310bb4a4c9945070b04862264 159 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 158 42.911 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AYJ52_08840 1ff60c4310bb4a4c9945070b04862264 159 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 158 2.2E-30 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AYJ52_08840 1ff60c4310bb4a4c9945070b04862264 159 Gene3D G3DSA:3.30.160.70 2 74 8.4E-18 T 11-10-2018 AYJ52_08840 1ff60c4310bb4a4c9945070b04862264 159 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 6.3E-33 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AYJ52_08840 1ff60c4310bb4a4c9945070b04862264 159 SUPERFAMILY SSF46767 77 158 1.09E-29 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AYJ52_08840 1ff60c4310bb4a4c9945070b04862264 159 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 75 3.5E-13 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AYJ52_08840 1ff60c4310bb4a4c9945070b04862264 159 Gene3D G3DSA:1.10.10.10 75 159 5.9E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_08840 1ff60c4310bb4a4c9945070b04862264 159 SUPERFAMILY SSF53155 4 83 1.1E-17 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AYJ52_05830 94b12579d392b38dd17e2e4359e55ecc 81 Pfam PF00137 ATP synthase subunit C 10 72 8.8E-9 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AYJ52_05830 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.2E-7 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05830 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.2E-7 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05830 94b12579d392b38dd17e2e4359e55ecc 81 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.2E-7 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05830 94b12579d392b38dd17e2e4359e55ecc 81 Gene3D G3DSA:1.20.20.10 1 77 3.0E-27 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05830 94b12579d392b38dd17e2e4359e55ecc 81 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05830 94b12579d392b38dd17e2e4359e55ecc 81 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.2E-28 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AYJ52_05830 94b12579d392b38dd17e2e4359e55ecc 81 SUPERFAMILY SSF81333 2 78 4.05E-18 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AYJ52_05830 94b12579d392b38dd17e2e4359e55ecc 81 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.695 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_19395 bb34e1cc0e18513fb9a7659b1cbe3a2d 241 SMART SM00479 65 234 5.5E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_19395 bb34e1cc0e18513fb9a7659b1cbe3a2d 241 Gene3D G3DSA:3.30.420.10 65 235 2.2E-32 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_19395 bb34e1cc0e18513fb9a7659b1cbe3a2d 241 Pfam PF00929 Exonuclease 68 224 3.0E-16 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_19395 bb34e1cc0e18513fb9a7659b1cbe3a2d 241 SUPERFAMILY SSF53098 61 233 1.37E-30 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_11145 757d61355fea375f34907e2bcc5f4770 84 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 2.2E-29 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AYJ52_11145 757d61355fea375f34907e2bcc5f4770 84 Gene3D G3DSA:3.30.70.1680 1 59 1.2E-28 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AYJ52_11145 757d61355fea375f34907e2bcc5f4770 84 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-20 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AYJ52_11145 757d61355fea375f34907e2bcc5f4770 84 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 64 17.498 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AYJ52_11145 757d61355fea375f34907e2bcc5f4770 84 Pfam PF02599 Global regulator protein family 1 52 1.0E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AYJ52_11145 757d61355fea375f34907e2bcc5f4770 84 SUPERFAMILY SSF117130 1 54 3.4E-20 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AYJ52_15360 acc97fe15902bbed5ac7accd3d88d4ee 226 Gene3D G3DSA:3.30.2010.10 124 215 2.0E-17 T 11-10-2018 AYJ52_15360 acc97fe15902bbed5ac7accd3d88d4ee 226 Pfam PF01863 Protein of unknown function DUF45 17 216 2.2E-46 T 11-10-2018 IPR002725 Protein of unknown function DUF45 AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.6E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 Gene3D G3DSA:3.40.50.720 1 244 5.3E-83 T 11-10-2018 AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 1.0E-5 T 11-10-2018 AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 SUPERFAMILY SSF51735 5 243 1.33E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 1.2E-66 T 11-10-2018 AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_09475 ab106e0cb86db81afc8ef05910ed58d3 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 9.6E-96 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AYJ52_19155 0682a74bc54e3c0aff7eca4729a1498a 481 Gene3D G3DSA:3.40.309.10 229 429 1.5E-138 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_19155 0682a74bc54e3c0aff7eca4729a1498a 481 SUPERFAMILY SSF53720 22 465 4.32E-101 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_19155 0682a74bc54e3c0aff7eca4729a1498a 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 225 232 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_19155 0682a74bc54e3c0aff7eca4729a1498a 481 Gene3D G3DSA:3.40.605.10 26 449 1.5E-138 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_19155 0682a74bc54e3c0aff7eca4729a1498a 481 PIRSF PIRSF036492 4 481 4.9E-148 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AYJ52_19155 0682a74bc54e3c0aff7eca4729a1498a 481 Pfam PF00171 Aldehyde dehydrogenase family 26 447 1.3E-73 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_02915 ba68fa86a403af25b16366ac75c86e63 288 Gene3D G3DSA:3.40.190.10 175 251 2.2E-8 T 11-10-2018 AYJ52_02915 ba68fa86a403af25b16366ac75c86e63 288 SUPERFAMILY SSF53850 87 286 2.92E-31 T 11-10-2018 AYJ52_02915 ba68fa86a403af25b16366ac75c86e63 288 Gene3D G3DSA:3.40.190.10 84 174 6.0E-18 T 11-10-2018 AYJ52_02915 ba68fa86a403af25b16366ac75c86e63 288 Gene3D G3DSA:1.10.10.10 1 83 6.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_02915 ba68fa86a403af25b16366ac75c86e63 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_02915 ba68fa86a403af25b16366ac75c86e63 288 Pfam PF03466 LysR substrate binding domain 87 286 9.7E-32 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_02915 ba68fa86a403af25b16366ac75c86e63 288 SUPERFAMILY SSF46785 1 110 8.16E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_00515 dbc0911844ee2216a5a6dcdbe66bb93d 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 95 26.744 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_00515 dbc0911844ee2216a5a6dcdbe66bb93d 96 SUPERFAMILY SSF50129 2 95 1.32E-33 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_00515 dbc0911844ee2216a5a6dcdbe66bb93d 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 93 1.7E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_00515 dbc0911844ee2216a5a6dcdbe66bb93d 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AYJ52_00515 dbc0911844ee2216a5a6dcdbe66bb93d 96 Gene3D G3DSA:2.30.33.40 1 96 1.2E-36 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AYJ52_00515 dbc0911844ee2216a5a6dcdbe66bb93d 96 SMART SM00883 3 94 4.6E-57 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_00515 dbc0911844ee2216a5a6dcdbe66bb93d 96 PRINTS PR00297 10kDa chaperonin signature 60 72 5.6E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_00515 dbc0911844ee2216a5a6dcdbe66bb93d 96 PRINTS PR00297 10kDa chaperonin signature 4 19 5.6E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_00515 dbc0911844ee2216a5a6dcdbe66bb93d 96 PRINTS PR00297 10kDa chaperonin signature 26 47 5.6E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_00515 dbc0911844ee2216a5a6dcdbe66bb93d 96 PRINTS PR00297 10kDa chaperonin signature 81 94 5.6E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_15655 c01a780be8a076fcbae844a0ddc90909 161 SUPERFAMILY SSF54637 16 158 4.13E-45 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_15655 c01a780be8a076fcbae844a0ddc90909 161 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 16 157 30.668 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AYJ52_15655 c01a780be8a076fcbae844a0ddc90909 161 Gene3D G3DSA:3.10.129.10 11 158 9.3E-55 T 11-10-2018 AYJ52_15655 c01a780be8a076fcbae844a0ddc90909 161 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 16 153 7.4E-56 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AYJ52_15655 c01a780be8a076fcbae844a0ddc90909 161 Pfam PF07977 FabA-like domain 25 149 1.3E-31 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AYJ52_09005 cc2416bc912ba3b826ecf10c484b4dfa 347 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 6.4E-37 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AYJ52_09005 cc2416bc912ba3b826ecf10c484b4dfa 347 PIRSF PIRSF005632 1 343 2.1E-199 T 11-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AYJ52_09005 cc2416bc912ba3b826ecf10c484b4dfa 347 SUPERFAMILY SSF51726 7 341 1.57E-68 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AYJ52_09005 cc2416bc912ba3b826ecf10c484b4dfa 347 Gene3D G3DSA:3.20.20.210 1 343 8.9E-135 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AYJ52_12640 8f428d650e75ff3092b2755e10e7d0a9 306 Gene3D G3DSA:3.40.190.10 91 291 4.1E-64 T 11-10-2018 AYJ52_12640 8f428d650e75ff3092b2755e10e7d0a9 306 Pfam PF03466 LysR substrate binding domain 89 292 1.9E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12640 8f428d650e75ff3092b2755e10e7d0a9 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12640 8f428d650e75ff3092b2755e10e7d0a9 306 Gene3D G3DSA:1.10.10.10 3 89 2.7E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12640 8f428d650e75ff3092b2755e10e7d0a9 306 Gene3D G3DSA:3.40.190.10 163 266 4.1E-64 T 11-10-2018 AYJ52_12640 8f428d650e75ff3092b2755e10e7d0a9 306 SUPERFAMILY SSF46785 3 111 6.05E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12640 8f428d650e75ff3092b2755e10e7d0a9 306 SUPERFAMILY SSF53850 89 298 7.24E-45 T 11-10-2018 AYJ52_01960 a57717b4b54713b545b41389927b82e0 355 Pfam PF00534 Glycosyl transferases group 1 170 327 6.5E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AYJ52_01960 a57717b4b54713b545b41389927b82e0 355 Gene3D G3DSA:3.40.50.2000 16 342 2.1E-53 T 11-10-2018 AYJ52_01960 a57717b4b54713b545b41389927b82e0 355 Pfam PF13439 Glycosyltransferase Family 4 16 145 1.0E-9 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AYJ52_01960 a57717b4b54713b545b41389927b82e0 355 SUPERFAMILY SSF53756 3 349 2.62E-60 T 11-10-2018 AYJ52_01960 a57717b4b54713b545b41389927b82e0 355 Gene3D G3DSA:3.40.50.2000 153 333 2.1E-53 T 11-10-2018 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 SUPERFAMILY SSF51905 2 313 4.04E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 Gene3D G3DSA:3.50.50.60 9 311 1.2E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.0E-38 T 11-10-2018 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.0E-38 T 11-10-2018 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 1.0E-38 T 11-10-2018 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 1.0E-38 T 11-10-2018 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.0E-38 T 11-10-2018 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 2.2E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 2.2E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 2.2E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 2.2E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 2.2E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 2.2E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 2.2E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 2.2E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 293 312 2.2E-79 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 300 9.9E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 Gene3D G3DSA:3.50.50.60 117 243 1.2E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_09745 8d5cadfc375840ce4f25794a89b4dcaf 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 312 1.8E-121 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AYJ52_04955 f6f41c4909c1a3e757acfa93225b2040 232 Pfam PF13098 Thioredoxin-like domain 107 226 1.7E-29 T 11-10-2018 IPR012336 Thioredoxin-like fold AYJ52_04955 f6f41c4909c1a3e757acfa93225b2040 232 Gene3D G3DSA:3.40.30.10 99 230 2.3E-35 T 11-10-2018 AYJ52_04955 f6f41c4909c1a3e757acfa93225b2040 232 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 78 1.5E-15 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AYJ52_04955 f6f41c4909c1a3e757acfa93225b2040 232 SUPERFAMILY SSF54423 31 82 6.28E-13 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AYJ52_04955 f6f41c4909c1a3e757acfa93225b2040 232 SUPERFAMILY SSF52833 77 225 5.03E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_04955 f6f41c4909c1a3e757acfa93225b2040 232 ProSitePatterns PS00194 Thioredoxin family active site. 115 133 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AYJ52_04955 f6f41c4909c1a3e757acfa93225b2040 232 Gene3D G3DSA:3.10.450.70 20 82 2.2E-10 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AYJ52_07605 9f79bbddc5d015869d8dcdd80dfa0d30 763 Gene3D G3DSA:2.40.170.20 179 763 4.8E-133 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_07605 9f79bbddc5d015869d8dcdd80dfa0d30 763 Gene3D G3DSA:2.170.130.10 47 175 1.2E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_07605 9f79bbddc5d015869d8dcdd80dfa0d30 763 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 163 4.2E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_07605 9f79bbddc5d015869d8dcdd80dfa0d30 763 Pfam PF00593 TonB dependent receptor 271 762 1.8E-52 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_07605 9f79bbddc5d015869d8dcdd80dfa0d30 763 SUPERFAMILY SSF56935 29 763 2.29E-121 T 11-10-2018 AYJ52_07605 9f79bbddc5d015869d8dcdd80dfa0d30 763 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 762 5.9E-77 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 911 6.8E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Gene3D G3DSA:3.30.2060.10 128 213 7.0E-101 T 11-10-2018 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Gene3D G3DSA:3.40.50.300 544 783 3.2E-229 T 11-10-2018 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 SUPERFAMILY SSF143517 997 1149 6.8E-43 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 SMART SM00487 602 797 9.4E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Gene3D G3DSA:3.40.50.300 480 991 3.2E-229 T 11-10-2018 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 SUPERFAMILY SSF141259 473 550 1.31E-21 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 SMART SM01058 481 578 2.2E-43 T 11-10-2018 IPR003711 CarD-like/TRCF domain AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Pfam PF00270 DEAD/DEAH box helicase 609 764 5.4E-20 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 SMART SM00982 1010 1110 5.5E-47 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 SUPERFAMILY SSF52540 8 346 5.31E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Pfam PF03461 TRCF domain 1011 1101 1.2E-27 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 SUPERFAMILY SSF52540 525 785 7.09E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 SUPERFAMILY SSF52540 784 992 1.3E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Gene3D G3DSA:2.30.30.840 485 543 3.2E-229 T 11-10-2018 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 SUPERFAMILY SSF52540 354 467 2.86E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1084 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 SMART SM00490 828 912 2.5E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Gene3D G3DSA:3.40.50.11140 360 455 9.9E-8 T 11-10-2018 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Pfam PF02559 CarD-like/TRCF domain 482 575 2.2E-21 T 11-10-2018 IPR003711 CarD-like/TRCF domain AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Gene3D G3DSA:3.40.50.11180 27 338 7.0E-101 T 11-10-2018 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 39 1108 27.162 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AYJ52_13680 1eb7997ea3e9097875a57db79b7cbcdb 1153 Gene3D G3DSA:3.90.1150.50 1006 1152 3.1E-44 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 Gene3D G3DSA:3.40.50.1370 21 321 1.1E-89 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 152 163 4.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 288 311 4.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 4.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 285 4.5E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 20 325 40.239 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 SUPERFAMILY SSF53671 20 324 1.96E-92 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 173 321 4.0E-27 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 164 1.7E-40 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 304 318 3.8E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 239 248 3.8E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 151 168 3.8E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 3.8E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 3.8E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 280 285 3.8E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 66 73 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 Gene3D G3DSA:3.40.50.1370 152 310 1.1E-89 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AYJ52_11240 91c577a95b39ac1966fdd758fb7765e4 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 21 323 1.9E-91 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 SMART SM00065 21 168 2.9E-23 T 11-10-2018 IPR003018 GAF domain GO:0005515 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 SUPERFAMILY SSF55781 4 162 1.7E-33 T 11-10-2018 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 SUPERFAMILY SSF52009 304 423 2.22E-26 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 184 735 4.0E-126 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 SUPERFAMILY SSF51621 432 726 5.76E-98 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 403 7.5E-17 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 Pfam PF13185 GAF domain 21 158 1.3E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 431 718 1.2E-95 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 Gene3D G3DSA:1.10.274.10 201 325 2.3E-58 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 625 643 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 9.0E-23 T 11-10-2018 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 625 640 9.0E-23 T 11-10-2018 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 642 657 9.0E-23 T 11-10-2018 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 678 690 9.0E-23 T 11-10-2018 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 Gene3D G3DSA:3.20.20.60 412 752 4.6E-105 T 11-10-2018 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 SUPERFAMILY SSF47831 209 320 2.75E-26 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 Gene3D G3DSA:3.50.30.10 185 411 2.3E-58 T 11-10-2018 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 Pfam PF05524 PEP-utilising enzyme, N-terminal 183 305 2.4E-21 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AYJ52_07270 0a0d5d5856c8d2d27ff6b451a9546179 764 Gene3D G3DSA:3.30.450.40 2 168 1.3E-48 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_12710 a75572e2be3e346a70378406e42e8f88 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 50.956 T 11-10-2018 IPR009662 Malonate decarboxylase delta subunit AYJ52_12710 a75572e2be3e346a70378406e42e8f88 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 1.0E-35 T 11-10-2018 IPR009662 Malonate decarboxylase delta subunit AYJ52_12710 a75572e2be3e346a70378406e42e8f88 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 16 95 5.3E-25 T 11-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AYJ52_12710 a75572e2be3e346a70378406e42e8f88 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 7.4E-36 T 11-10-2018 IPR009662 Malonate decarboxylase delta subunit AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 SUPERFAMILY SSF52540 159 386 1.81E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 Gene3D G3DSA:2.30.30.140 5 57 4.0E-24 T 11-10-2018 AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 5 943 26.698 T 11-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 Gene3D G3DSA:2.30.30.930 59 120 4.4E-6 T 11-10-2018 AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 SUPERFAMILY SSF52540 282 619 2.04E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 Pfam PF12137 RNA polymerase recycling family C-terminal 585 942 2.3E-120 T 11-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 Gene3D G3DSA:3.30.360.80 691 762 8.1E-21 T 11-10-2018 AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 Pfam PF00271 Helicase conserved C-terminal domain 472 580 9.6E-12 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 Gene3D G3DSA:3.40.50.300 436 612 1.2E-38 T 11-10-2018 AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 SMART SM00490 496 580 9.8E-15 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 SMART SM00487 156 355 8.7E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 Pfam PF00176 SNF2 family N-terminal domain 180 353 1.6E-11 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AYJ52_18325 11cc252e7f5b49ff06718d2e1487d7bb 945 Gene3D G3DSA:3.40.50.10810 156 427 1.5E-85 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AYJ52_05610 d8b9a5acfc443a0cd32ca656d2cb8fcd 549 Pfam PF00501 AMP-binding enzyme 40 443 2.6E-77 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_05610 d8b9a5acfc443a0cd32ca656d2cb8fcd 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 1.5E-22 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_05610 d8b9a5acfc443a0cd32ca656d2cb8fcd 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_05610 d8b9a5acfc443a0cd32ca656d2cb8fcd 549 Gene3D G3DSA:3.40.50.12780 19 439 9.5E-97 T 11-10-2018 AYJ52_05610 d8b9a5acfc443a0cd32ca656d2cb8fcd 549 SUPERFAMILY SSF56801 27 542 2.35E-137 T 11-10-2018 AYJ52_05610 d8b9a5acfc443a0cd32ca656d2cb8fcd 549 Gene3D G3DSA:3.30.300.30 440 548 6.1E-29 T 11-10-2018 AYJ52_02620 95ab9604da2e9a852219c8e64721ecc2 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.853 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02620 95ab9604da2e9a852219c8e64721ecc2 131 SUPERFAMILY SSF56047 2 130 6.41E-47 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02620 95ab9604da2e9a852219c8e64721ecc2 131 Pfam PF00410 Ribosomal protein S8 5 130 1.8E-49 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02620 95ab9604da2e9a852219c8e64721ecc2 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02620 95ab9604da2e9a852219c8e64721ecc2 131 Gene3D G3DSA:3.30.1490.10 74 130 6.0E-22 T 11-10-2018 AYJ52_02620 95ab9604da2e9a852219c8e64721ecc2 131 Gene3D G3DSA:3.30.1370.30 2 73 1.7E-29 T 11-10-2018 AYJ52_07910 6e46cb0383d6e536f5802852b61482ab 329 SUPERFAMILY SSF48019 208 324 1.11E-24 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AYJ52_07910 6e46cb0383d6e536f5802852b61482ab 329 Gene3D G3DSA:1.20.272.10 210 329 3.0E-21 T 11-10-2018 AYJ52_07910 6e46cb0383d6e536f5802852b61482ab 329 Pfam PF06144 DNA polymerase III, delta subunit 20 181 2.3E-15 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AYJ52_07910 6e46cb0383d6e536f5802852b61482ab 329 Gene3D G3DSA:3.40.50.300 7 134 3.3E-25 T 11-10-2018 AYJ52_07910 6e46cb0383d6e536f5802852b61482ab 329 SUPERFAMILY SSF52540 5 206 2.3E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07910 6e46cb0383d6e536f5802852b61482ab 329 Gene3D G3DSA:1.10.8.60 143 209 1.6E-10 T 11-10-2018 AYJ52_07910 6e46cb0383d6e536f5802852b61482ab 329 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 322 3.1E-47 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AYJ52_09860 4e76bfffeb5d6fa5cf0fd83fb561bb1e 230 Pfam PF01168 Alanine racemase, N-terminal domain 12 224 1.1E-26 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_09860 4e76bfffeb5d6fa5cf0fd83fb561bb1e 230 Gene3D G3DSA:3.20.20.10 1 229 2.3E-82 T 11-10-2018 IPR029066 PLP-binding barrel AYJ52_09860 4e76bfffeb5d6fa5cf0fd83fb561bb1e 230 PIRSF PIRSF004848 1 230 5.9E-74 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AYJ52_09860 4e76bfffeb5d6fa5cf0fd83fb561bb1e 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 224 8.7E-72 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AYJ52_09860 4e76bfffeb5d6fa5cf0fd83fb561bb1e 230 SUPERFAMILY SSF51419 4 222 1.07E-76 T 11-10-2018 IPR029066 PLP-binding barrel AYJ52_09860 4e76bfffeb5d6fa5cf0fd83fb561bb1e 230 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AYJ52_09860 4e76bfffeb5d6fa5cf0fd83fb561bb1e 230 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 223 31.191 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AYJ52_08995 99465ff5714087a026d6cb1bba18b7a4 290 Gene3D G3DSA:3.40.190.10 164 253 1.0E-26 T 11-10-2018 AYJ52_08995 99465ff5714087a026d6cb1bba18b7a4 290 Pfam PF03466 LysR substrate binding domain 94 282 1.7E-11 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_08995 99465ff5714087a026d6cb1bba18b7a4 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.2E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08995 99465ff5714087a026d6cb1bba18b7a4 290 Gene3D G3DSA:1.10.10.10 4 95 6.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_08995 99465ff5714087a026d6cb1bba18b7a4 290 Gene3D G3DSA:3.40.190.10 100 279 1.0E-26 T 11-10-2018 AYJ52_08995 99465ff5714087a026d6cb1bba18b7a4 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08995 99465ff5714087a026d6cb1bba18b7a4 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08995 99465ff5714087a026d6cb1bba18b7a4 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08995 99465ff5714087a026d6cb1bba18b7a4 290 SUPERFAMILY SSF53850 95 285 6.52E-18 T 11-10-2018 AYJ52_08995 99465ff5714087a026d6cb1bba18b7a4 290 SUPERFAMILY SSF46785 3 83 1.24E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 SUPERFAMILY SSF82714 734 818 7.59E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 8.1E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 8.1E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 8.1E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 8.1E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 8.1E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 Gene3D G3DSA:3.30.70.1440 680 879 1.4E-252 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 Gene3D G3DSA:1.20.1640.10 527 1031 1.4E-252 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 SUPERFAMILY SSF82866 297 487 1.12E-37 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 SUPERFAMILY SSF82693 139 325 1.65E-16 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 SUPERFAMILY SSF82714 187 266 6.28E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 Gene3D G3DSA:1.20.1640.10 15 513 1.4E-252 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 SUPERFAMILY SSF82693 581 673 2.27E-5 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 SUPERFAMILY SSF82693 42 138 9.77E-19 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 Gene3D G3DSA:3.30.70.1430 42 827 1.4E-252 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 Pfam PF00873 AcrB/AcrD/AcrF family 7 1032 2.0E-167 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 Gene3D G3DSA:3.30.70.1320 138 328 1.4E-252 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 Gene3D G3DSA:3.30.2090.10 731 819 1.4E-252 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 Gene3D G3DSA:3.30.70.1430 581 679 1.4E-252 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 SUPERFAMILY SSF82866 815 1038 2.49E-47 T 11-10-2018 AYJ52_04755 0733a2511b2644f913e67aa9d6e5132c 1041 Gene3D G3DSA:3.30.2090.10 181 270 1.4E-252 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_05080 b654f6c93ad1334c13bd6bc25e261b5d 356 Gene3D G3DSA:3.40.50.1820 47 351 8.4E-73 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_05080 b654f6c93ad1334c13bd6bc25e261b5d 356 SUPERFAMILY SSF53474 69 344 6.12E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_05080 b654f6c93ad1334c13bd6bc25e261b5d 356 Pfam PF07859 alpha/beta hydrolase fold 123 328 1.3E-61 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AYJ52_07235 4c07264b435e5a5e1bc5c9641a85b65d 224 SUPERFAMILY SSF56784 4 214 1.05E-55 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_07235 4c07264b435e5a5e1bc5c9641a85b65d 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 3.9E-34 T 11-10-2018 AYJ52_07235 4c07264b435e5a5e1bc5c9641a85b65d 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 183 1.6E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_07235 4c07264b435e5a5e1bc5c9641a85b65d 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 77 177 2.0E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_07235 4c07264b435e5a5e1bc5c9641a85b65d 224 Gene3D G3DSA:1.10.150.240 20 83 7.9E-50 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ52_07235 4c07264b435e5a5e1bc5c9641a85b65d 224 Gene3D G3DSA:3.40.50.1000 8 204 7.9E-50 T 11-10-2018 IPR023214 HAD superfamily AYJ52_05620 e0c8d7fa265bfd6099c6cea13b0453c3 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AYJ52_05620 e0c8d7fa265bfd6099c6cea13b0453c3 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 7.0E-85 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_05620 e0c8d7fa265bfd6099c6cea13b0453c3 257 Gene3D G3DSA:1.10.12.10 200 256 2.8E-25 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AYJ52_05620 e0c8d7fa265bfd6099c6cea13b0453c3 257 SUPERFAMILY SSF52096 1 256 1.94E-88 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_05620 e0c8d7fa265bfd6099c6cea13b0453c3 257 Gene3D G3DSA:3.90.226.10 2 199 1.5E-75 T 11-10-2018 AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 SUPERFAMILY SSF50249 1 62 1.09E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 Gene3D G3DSA:2.40.50.140 1 65 1.2E-23 T 11-10-2018 AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 SUPERFAMILY SSF46929 152 198 4.71E-9 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 198 1.2E-56 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 Pfam PF14520 Helix-hairpin-helix domain 71 129 1.8E-18 T 11-10-2018 AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 Gene3D G3DSA:1.10.8.10 151 198 1.0E-13 T 11-10-2018 AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 SUPERFAMILY SSF47781 65 135 6.3E-22 T 11-10-2018 IPR010994 RuvA domain 2-like AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 198 29.935 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 SMART SM00278 72 91 0.52 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 SMART SM00278 107 126 0.13 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 Pfam PF07499 RuvA, C-terminal domain 155 198 1.8E-13 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 Pfam PF01330 RuvA N terminal domain 1 61 3.7E-20 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AYJ52_18785 1c41432cd04d1d5f4301baaaedd586b9 199 Gene3D G3DSA:1.10.150.20 66 140 4.6E-26 T 11-10-2018 AYJ52_02045 ba94eef12d714dce2670fa36a2c8c0ff 417 SUPERFAMILY SSF52507 7 185 2.75E-63 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AYJ52_02045 ba94eef12d714dce2670fa36a2c8c0ff 417 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 199 382 1.2E-71 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AYJ52_02045 ba94eef12d714dce2670fa36a2c8c0ff 417 Gene3D G3DSA:3.40.50.1950 4 194 5.3E-60 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AYJ52_02045 ba94eef12d714dce2670fa36a2c8c0ff 417 Gene3D G3DSA:3.40.50.10300 197 417 2.1E-77 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AYJ52_02045 ba94eef12d714dce2670fa36a2c8c0ff 417 SUPERFAMILY SSF102645 198 415 2.35E-73 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AYJ52_02045 ba94eef12d714dce2670fa36a2c8c0ff 417 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 10 410 6.5E-145 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AYJ52_02045 ba94eef12d714dce2670fa36a2c8c0ff 417 Pfam PF02441 Flavoprotein 11 182 2.2E-48 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 SMART SM00926 221 275 2.1E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 Gene3D G3DSA:2.20.25.90 221 275 2.0E-13 T 11-10-2018 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 SUPERFAMILY SSF54862 82 213 3.6E-32 T 11-10-2018 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 SUPERFAMILY SSF50692 792 878 4.29E-8 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 Gene3D G3DSA:3.40.50.740 509 678 2.3E-15 T 11-10-2018 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 SUPERFAMILY SSF54292 1 77 3.28E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 645 6.7E-200 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 SMART SM00929 88 128 2.3E-19 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 127 7.8E-15 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 SUPERFAMILY SSF53706 219 679 1.93E-83 T 11-10-2018 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 3.4E-11 T 11-10-2018 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 Pfam PF00384 Molybdopterin oxidoreductase 567 628 1.7E-8 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 Gene3D G3DSA:3.10.20.740 1 128 1.3E-28 T 11-10-2018 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 1.8E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09160 55f5e549e54105cb70aa16573697b92a 894 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_01640 ef3186a4a1648868bac759881083b163 452 TIGRFAM TIGR03173 pbuX: xanthine permease 29 448 1.7E-127 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 AYJ52_01640 ef3186a4a1648868bac759881083b163 452 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 446 1.3E-122 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AYJ52_01640 ef3186a4a1648868bac759881083b163 452 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 364 384 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AYJ52_01640 ef3186a4a1648868bac759881083b163 452 Pfam PF00860 Permease family 25 416 1.2E-98 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 Pfam PF00106 short chain dehydrogenase 6 204 4.7E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 1.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 SUPERFAMILY SSF51735 3 251 6.29E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 197 2.6E-4 T 11-10-2018 AYJ52_16605 6f150ffae71d7cef7b0fcd34dea528b3 256 Gene3D G3DSA:3.40.50.720 1 256 1.5E-78 T 11-10-2018 AYJ52_04895 b33cf7474f067e1e20a62cf37d489da0 130 PIRSF PIRSF000029 2 130 2.7E-29 T 11-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AYJ52_04895 b33cf7474f067e1e20a62cf37d489da0 130 Gene3D G3DSA:1.20.120.10 20 130 1.2E-33 T 11-10-2018 AYJ52_04895 b33cf7474f067e1e20a62cf37d489da0 130 SUPERFAMILY SSF47175 25 130 2.47E-24 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AYJ52_04895 b33cf7474f067e1e20a62cf37d489da0 130 Pfam PF07361 Cytochrome b562 26 130 4.5E-24 T 11-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 Gene3D G3DSA:3.40.190.10 103 274 3.1E-60 T 11-10-2018 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 SUPERFAMILY SSF53850 101 285 1.9E-61 T 11-10-2018 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 Gene3D G3DSA:3.30.70.260 279 368 5.0E-28 T 11-10-2018 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 Gene3D G3DSA:1.20.59.10 14 100 1.9E-30 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 SUPERFAMILY SSF48600 10 97 4.43E-20 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 Pfam PF01842 ACT domain 287 351 1.5E-12 T 11-10-2018 IPR002912 ACT domain AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 252 274 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 Pfam PF00800 Prephenate dehydratase 101 278 5.8E-63 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 PIRSF PIRSF001500 7 369 2.3E-135 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 TIGRFAM TIGR01807 CM_P2: chorismate mutase 14 89 1.9E-26 T 11-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 SUPERFAMILY SSF55021 271 366 3.14E-26 T 11-10-2018 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 Gene3D G3DSA:3.40.190.10 181 265 3.1E-60 T 11-10-2018 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 SMART SM00830 18 99 2.7E-29 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AYJ52_17335 e59b2980a984aa0ad030bccf7e08e87d 369 Pfam PF01817 Chorismate mutase type II 18 96 4.7E-22 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 Gene3D G3DSA:1.10.340.30 26 137 4.7E-76 T 11-10-2018 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 SUPERFAMILY SSF48150 8 211 1.73E-70 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 SMART SM00478 43 190 8.1E-52 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 TIGRFAM TIGR01083 nth: endonuclease III 9 199 1.2E-83 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 9.0E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 PIRSF PIRSF001435 3 214 7.5E-53 T 11-10-2018 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 Hamap MF_00942 Endonuclease III [nth]. 3 214 36.835 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 Pfam PF00633 Helix-hairpin-helix motif 105 132 3.2E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 ProSitePatterns PS01155 Endonuclease III family signature. 107 136 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 Gene3D G3DSA:1.10.1670.10 16 208 4.7E-76 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AYJ52_10545 c65ae90f0d251a8631608f2222969fbd 229 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 172 3.9E-17 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AYJ52_16845 aa6ac9f53dd758f352691dbf57599c04 186 Gene3D G3DSA:1.10.10.60 11 58 3.2E-12 T 11-10-2018 AYJ52_16845 aa6ac9f53dd758f352691dbf57599c04 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 38 65 2.5E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_16845 aa6ac9f53dd758f352691dbf57599c04 186 Pfam PF16859 Bacterial transcriptional repressor C-terminal 79 180 8.5E-9 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AYJ52_16845 aa6ac9f53dd758f352691dbf57599c04 186 SUPERFAMILY SSF48498 82 185 1.36E-10 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_16845 aa6ac9f53dd758f352691dbf57599c04 186 Gene3D G3DSA:1.10.357.10 61 185 1.2E-8 T 11-10-2018 AYJ52_16845 aa6ac9f53dd758f352691dbf57599c04 186 SUPERFAMILY SSF46689 13 69 1.44E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_08260 fb168f9f64d5bd458a44a044e4aeeef1 349 Pfam PF06067 Domain of unknown function (DUF932) 77 329 1.5E-76 T 11-10-2018 IPR026325 Protein of unknown function DUF932 AYJ52_08260 fb168f9f64d5bd458a44a044e4aeeef1 349 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 345 2.5E-116 T 11-10-2018 IPR017686 Phage/plasmid-like protein AYJ52_08100 0c510ea85f5ca8b7f845f83929de19c2 196 Pfam PF13476 AAA domain 8 189 1.2E-12 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain AYJ52_08100 0c510ea85f5ca8b7f845f83929de19c2 196 SUPERFAMILY SSF52540 5 191 1.12E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_08100 0c510ea85f5ca8b7f845f83929de19c2 196 Gene3D G3DSA:3.40.50.300 5 195 5.1E-18 T 11-10-2018 AYJ52_08190 6170141e51bddc5dc365f7eb6d59d213 253 SUPERFAMILY SSF69572 8 248 1.31E-59 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AYJ52_08190 6170141e51bddc5dc365f7eb6d59d213 253 Pfam PF00899 ThiF family 21 248 6.7E-37 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AYJ52_08190 6170141e51bddc5dc365f7eb6d59d213 253 Gene3D G3DSA:3.40.50.720 2 253 8.6E-90 T 11-10-2018 AYJ52_09140 6511a3c060efc883645cfff8de64b73a 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 25 179 43.003 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09140 6511a3c060efc883645cfff8de64b73a 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 35 179 1.7E-68 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09140 6511a3c060efc883645cfff8de64b73a 225 Gene3D G3DSA:3.40.50.12280 19 190 2.7E-70 T 11-10-2018 AYJ52_09140 6511a3c060efc883645cfff8de64b73a 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 146 162 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09140 6511a3c060efc883645cfff8de64b73a 225 SUPERFAMILY SSF56770 42 182 7.72E-64 T 11-10-2018 AYJ52_09140 6511a3c060efc883645cfff8de64b73a 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 88 172 4.4E-22 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_07195 9755c0670d4ada4c2123b537c38462f1 384 SUPERFAMILY SSF102114 10 384 4.97E-100 T 11-10-2018 AYJ52_07195 9755c0670d4ada4c2123b537c38462f1 384 SMART SM00729 10 230 3.8E-51 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AYJ52_07195 9755c0670d4ada4c2123b537c38462f1 384 Gene3D G3DSA:3.80.30.20 2 311 3.1E-91 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AYJ52_07195 9755c0670d4ada4c2123b537c38462f1 384 Pfam PF04055 Radical SAM superfamily 15 185 9.1E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_07195 9755c0670d4ada4c2123b537c38462f1 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 363 2.0E-113 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 AYJ52_07195 9755c0670d4ada4c2123b537c38462f1 384 Pfam PF06969 HemN C-terminal domain 312 372 8.9E-11 T 11-10-2018 IPR010723 HemN, C-terminal AYJ52_08375 1622d93118ae20becd9e7497f54b2b60 308 SUPERFAMILY SSF103481 220 305 5.49E-14 T 11-10-2018 AYJ52_08375 1622d93118ae20becd9e7497f54b2b60 308 Pfam PF00892 EamA-like transporter family 10 147 5.6E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_08375 1622d93118ae20becd9e7497f54b2b60 308 Pfam PF00892 EamA-like transporter family 162 300 6.2E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_08375 1622d93118ae20becd9e7497f54b2b60 308 Gene3D G3DSA:1.10.3730.20 217 308 3.7E-5 T 11-10-2018 AYJ52_08375 1622d93118ae20becd9e7497f54b2b60 308 SUPERFAMILY SSF103481 47 151 2.48E-14 T 11-10-2018 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 425 1.9E-130 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 Gene3D G3DSA:3.30.390.10 1 127 5.1E-56 T 11-10-2018 IPR029017 Enolase-like, N-terminal AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 Hamap MF_00318 Enolase [eno]. 2 415 44.139 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 Pfam PF03952 Enolase, N-terminal domain 4 134 3.3E-59 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 Gene3D G3DSA:3.20.20.120 128 429 3.8E-130 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 SUPERFAMILY SSF54826 4 137 4.64E-56 T 11-10-2018 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 SMART SM01192 142 427 2.6E-209 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 PRINTS PR00148 Enolase signature 367 384 2.7E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 PRINTS PR00148 Enolase signature 164 177 2.7E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 PRINTS PR00148 Enolase signature 37 51 2.7E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 PRINTS PR00148 Enolase signature 338 352 2.7E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 PRINTS PR00148 Enolase signature 107 123 2.7E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 PRINTS PR00148 Enolase signature 315 326 2.7E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 PIRSF PIRSF001400 1 427 6.0E-191 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 SMART SM01193 4 134 2.7E-93 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 SUPERFAMILY SSF51604 143 416 3.82E-124 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AYJ52_15270 73120eaaa743b19092b2e956e8c1a3c5 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 1.1E-201 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_09230 e03ca77ffe92b7197eba32fe9a14554f 567 Pfam PF05552 Conserved TM helix 25 56 1.6E-7 T 11-10-2018 IPR008910 Conserved TM helix AYJ52_09230 e03ca77ffe92b7197eba32fe9a14554f 567 Pfam PF05552 Conserved TM helix 191 236 1.6E-12 T 11-10-2018 IPR008910 Conserved TM helix AYJ52_09230 e03ca77ffe92b7197eba32fe9a14554f 567 Pfam PF05552 Conserved TM helix 282 330 7.4E-16 T 11-10-2018 IPR008910 Conserved TM helix AYJ52_09230 e03ca77ffe92b7197eba32fe9a14554f 567 Pfam PF05552 Conserved TM helix 101 148 8.1E-18 T 11-10-2018 IPR008910 Conserved TM helix AYJ52_00140 b8962ad85498f731917b9553e19f113f 373 SUPERFAMILY SSF111369 156 319 1.7E-10 T 11-10-2018 AYJ52_00140 b8962ad85498f731917b9553e19f113f 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 79 315 1.6E-12 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_00140 b8962ad85498f731917b9553e19f113f 373 Gene3D G3DSA:2.40.30.170 78 365 9.4E-32 T 11-10-2018 AYJ52_00140 b8962ad85498f731917b9553e19f113f 373 SUPERFAMILY SSF111369 78 140 7.85E-6 T 11-10-2018 AYJ52_00140 b8962ad85498f731917b9553e19f113f 373 Gene3D G3DSA:2.40.50.100 87 285 9.4E-32 T 11-10-2018 AYJ52_00140 b8962ad85498f731917b9553e19f113f 373 Gene3D G3DSA:1.10.287.470 121 250 9.4E-32 T 11-10-2018 AYJ52_03985 ce7bf6257b448547d05d934f788ece7f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_03985 ce7bf6257b448547d05d934f788ece7f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_03985 ce7bf6257b448547d05d934f788ece7f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_03985 ce7bf6257b448547d05d934f788ece7f 216 SMART SM00448 1 115 5.8E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_03985 ce7bf6257b448547d05d934f788ece7f 216 Gene3D G3DSA:3.40.50.12740 1 210 1.0E-54 T 11-10-2018 AYJ52_03985 ce7bf6257b448547d05d934f788ece7f 216 SMART SM00421 149 206 4.1E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_03985 ce7bf6257b448547d05d934f788ece7f 216 SUPERFAMILY SSF52172 1 181 6.19E-30 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_03985 ce7bf6257b448547d05d934f788ece7f 216 Pfam PF00072 Response regulator receiver domain 3 115 2.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_03985 ce7bf6257b448547d05d934f788ece7f 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_03985 ce7bf6257b448547d05d934f788ece7f 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.2E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 SUPERFAMILY SSF46785 149 218 9.81E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 SMART SM00419 170 218 4.5E-13 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 Gene3D G3DSA:2.60.120.10 21 148 3.0E-41 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 Gene3D G3DSA:1.10.10.10 149 217 3.1E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 SUPERFAMILY SSF51206 20 147 1.15E-30 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 SMART SM00100 14 132 4.2E-21 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 81 99 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 ProSitePatterns PS00042 Crp-type HTH domain signature. 178 201 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 1.1E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 1.1E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 Pfam PF00325 Bacterial regulatory proteins, crp family 176 207 2.4E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AYJ52_11195 02081cf3d8c0ec645ad21afce8c19e1e 235 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 4.6E-21 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AYJ52_13920 ee513f88a6c7713c13e88b6d8fadaa3b 374 SUPERFAMILY SSF47819 193 291 8.22E-19 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AYJ52_13920 ee513f88a6c7713c13e88b6d8fadaa3b 374 Pfam PF00570 HRDC domain 210 276 1.9E-16 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AYJ52_13920 ee513f88a6c7713c13e88b6d8fadaa3b 374 SMART SM00341 207 287 2.7E-5 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AYJ52_13920 ee513f88a6c7713c13e88b6d8fadaa3b 374 SUPERFAMILY SSF47819 293 367 1.8E-15 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AYJ52_13920 ee513f88a6c7713c13e88b6d8fadaa3b 374 Gene3D G3DSA:1.10.150.80 297 370 3.9E-9 T 11-10-2018 AYJ52_13920 ee513f88a6c7713c13e88b6d8fadaa3b 374 Gene3D G3DSA:3.30.420.10 1 190 3.7E-43 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_13920 ee513f88a6c7713c13e88b6d8fadaa3b 374 SMART SM00474 2 169 8.8E-16 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AYJ52_13920 ee513f88a6c7713c13e88b6d8fadaa3b 374 Pfam PF01612 3'-5' exonuclease 3 168 6.4E-21 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AYJ52_13920 ee513f88a6c7713c13e88b6d8fadaa3b 374 SUPERFAMILY SSF53098 3 205 1.84E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_13920 ee513f88a6c7713c13e88b6d8fadaa3b 374 Gene3D G3DSA:1.10.150.80 198 288 3.7E-15 T 11-10-2018 AYJ52_15200 034bf33e1c8a578b69be4d3b20168800 451 SUPERFAMILY SSF103473 17 441 6.15E-82 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_15200 034bf33e1c8a578b69be4d3b20168800 451 Pfam PF07690 Major Facilitator Superfamily 36 408 6.5E-47 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_15200 034bf33e1c8a578b69be4d3b20168800 451 Gene3D G3DSA:1.20.1250.20 303 443 2.0E-12 T 11-10-2018 AYJ52_15200 034bf33e1c8a578b69be4d3b20168800 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 85 101 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_15200 034bf33e1c8a578b69be4d3b20168800 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_15200 034bf33e1c8a578b69be4d3b20168800 451 Gene3D G3DSA:1.20.1250.20 25 302 2.5E-59 T 11-10-2018 AYJ52_15200 034bf33e1c8a578b69be4d3b20168800 451 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 14 415 4.6E-158 T 11-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 Pfam PF02881 SRP54-type protein, helical bundle domain 86 147 7.3E-11 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 Gene3D G3DSA:1.20.120.140 67 365 1.1E-115 T 11-10-2018 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 95 366 5.2E-108 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 SMART SM00963 70 151 4.0E-24 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 Gene3D G3DSA:3.40.50.300 164 355 1.1E-115 T 11-10-2018 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 SMART SM00962 166 367 2.7E-123 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 SUPERFAMILY SSF47364 65 145 1.31E-19 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 94 367 60.139 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 340 353 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 Pfam PF00448 SRP54-type protein, GTPase domain 167 366 9.4E-78 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 SUPERFAMILY SSF52540 164 367 5.15E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_15450 eb61e62c40b9df2764699098bdb54f68 370 SMART SM00382 165 345 4.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_04795 a79c58289b079bd8cde5b92fbe98923c 609 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_04795 a79c58289b079bd8cde5b92fbe98923c 609 SUPERFAMILY SSF52016 421 607 1.49E-60 T 11-10-2018 AYJ52_04795 a79c58289b079bd8cde5b92fbe98923c 609 SUPERFAMILY SSF143975 3 420 1.06E-136 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_04795 a79c58289b079bd8cde5b92fbe98923c 609 Gene3D G3DSA:3.50.30.80 421 572 8.1E-56 T 11-10-2018 AYJ52_04795 a79c58289b079bd8cde5b92fbe98923c 609 Pfam PF00920 Dehydratase family 34 605 6.1E-224 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_04795 a79c58289b079bd8cde5b92fbe98923c 609 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.3E-252 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_04795 a79c58289b079bd8cde5b92fbe98923c 609 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 608 44.671 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_04795 a79c58289b079bd8cde5b92fbe98923c 609 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_09415 af6e8934cedaccee0ba753a9e5d72185 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 419 3.2E-183 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AYJ52_09415 af6e8934cedaccee0ba753a9e5d72185 426 Gene3D G3DSA:3.90.1150.10 8 412 1.3E-166 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_09415 af6e8934cedaccee0ba753a9e5d72185 426 Gene3D G3DSA:3.40.640.10 58 328 1.3E-166 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_09415 af6e8934cedaccee0ba753a9e5d72185 426 PIRSF PIRSF000521 23 422 5.9E-30 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_09415 af6e8934cedaccee0ba753a9e5d72185 426 SUPERFAMILY SSF53383 5 421 1.19E-131 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_09415 af6e8934cedaccee0ba753a9e5d72185 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_09415 af6e8934cedaccee0ba753a9e5d72185 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 422 48.875 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AYJ52_09415 af6e8934cedaccee0ba753a9e5d72185 426 Pfam PF00202 Aminotransferase class-III 23 418 5.2E-131 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 Gene3D G3DSA:2.40.240.10 364 567 3.0E-78 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 SUPERFAMILY SSF50715 364 569 3.14E-69 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 53 570 1.5E-228 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 51 361 1.3E-108 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 549 2.0E-56 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 Gene3D G3DSA:3.40.50.620 52 271 1.5E-102 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 Gene3D G3DSA:1.10.1160.10 285 363 1.8E-32 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 Gene3D G3DSA:3.90.800.10 125 233 1.5E-102 T 11-10-2018 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 24 570 50.341 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 SUPERFAMILY SSF52374 52 370 1.72E-95 T 11-10-2018 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 Gene3D G3DSA:2.40.240.10 372 486 3.0E-78 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 PRINTS PR00987 Glutamyl-tRNA synthetase signature 234 244 3.2E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 PRINTS PR00987 Glutamyl-tRNA synthetase signature 55 67 3.2E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_16395 3e739b74b15f73ab4b756ca832ba3e51 575 PRINTS PR00987 Glutamyl-tRNA synthetase signature 84 97 3.2E-7 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AYJ52_16535 c90959024c864449f2305b68380204bd 211 SUPERFAMILY SSF47240 55 180 6.92E-16 T 11-10-2018 IPR009078 Ferritin-like superfamily AYJ52_16535 c90959024c864449f2305b68380204bd 211 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 50 209 1.7E-41 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AYJ52_16535 c90959024c864449f2305b68380204bd 211 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 11 211 29.325 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AYJ52_10865 1763d9b2145fe14e74fe965d3e28f70c 476 SUPERFAMILY SSF53720 4 473 9.29E-153 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_10865 1763d9b2145fe14e74fe965d3e28f70c 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_10865 1763d9b2145fe14e74fe965d3e28f70c 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_10865 1763d9b2145fe14e74fe965d3e28f70c 476 Gene3D G3DSA:3.40.605.10 10 469 1.6E-159 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_10865 1763d9b2145fe14e74fe965d3e28f70c 476 Gene3D G3DSA:3.40.309.10 253 441 1.6E-159 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_10865 1763d9b2145fe14e74fe965d3e28f70c 476 Pfam PF00171 Aldehyde dehydrogenase family 15 471 2.7E-154 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_03425 36973b60d65a84dcb8e31f008e26bedc 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 7.1E-202 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 AYJ52_03425 36973b60d65a84dcb8e31f008e26bedc 425 PIRSF PIRSF001434 1 425 1.9E-137 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AYJ52_03425 36973b60d65a84dcb8e31f008e26bedc 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AYJ52_03425 36973b60d65a84dcb8e31f008e26bedc 425 SUPERFAMILY SSF53383 4 422 3.32E-131 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_03425 36973b60d65a84dcb8e31f008e26bedc 425 Gene3D G3DSA:3.90.1150.10 291 425 6.6E-55 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_03425 36973b60d65a84dcb8e31f008e26bedc 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 422 1.3E-146 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AYJ52_03425 36973b60d65a84dcb8e31f008e26bedc 425 Gene3D G3DSA:3.40.640.10 4 287 3.6E-102 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 220 816 4.4E-182 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 81 143 7.2E-14 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 14 75 9.6E-12 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 238 815 5.1E-191 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 720 2.2E-45 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 17 46 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 SUPERFAMILY SSF55008 80 145 3.01E-22 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 SUPERFAMILY SSF56784 505 813 1.76E-62 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_11410 6098b439d7858532aed3da11185ef021 823 Pfam PF00122 E1-E2 ATPase 306 485 3.0E-57 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 85 114 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 Pfam PF00403 Heavy-metal-associated domain 83 142 7.8E-18 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 Pfam PF00403 Heavy-metal-associated domain 14 74 2.4E-14 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 SUPERFAMILY SSF81653 307 405 3.66E-29 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 Gene3D G3DSA:3.40.50.1000 488 758 6.0E-93 T 11-10-2018 IPR023214 HAD superfamily AYJ52_11410 6098b439d7858532aed3da11185ef021 823 Gene3D G3DSA:3.30.70.100 12 80 2.9E-20 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 277 784 7.5E-95 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 642 1.0E-29 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 1.0E-29 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 725 1.0E-29 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 1.0E-29 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 663 1.0E-29 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 741 1.0E-29 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 SUPERFAMILY SSF81665 272 794 8.24E-13 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 SUPERFAMILY SSF55008 14 75 2.23E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 Gene3D G3DSA:3.40.1110.10 518 638 6.0E-93 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 Gene3D G3DSA:2.70.150.20 298 410 5.8E-40 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 Gene3D G3DSA:3.30.70.100 81 147 9.3E-24 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00943 Copper-transporting ATPase signature 295 313 6.0E-14 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00943 Copper-transporting ATPase signature 223 242 6.0E-14 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00943 Copper-transporting ATPase signature 683 700 6.0E-14 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00943 Copper-transporting ATPase signature 123 143 6.0E-14 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00943 Copper-transporting ATPase signature 275 294 6.0E-14 T 11-10-2018 AYJ52_11410 6098b439d7858532aed3da11185ef021 823 PRINTS PR00943 Copper-transporting ATPase signature 428 442 6.0E-14 T 11-10-2018 AYJ52_08530 a9c26c8d6edd89f246a0094e125e38db 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.558 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AYJ52_08530 a9c26c8d6edd89f246a0094e125e38db 64 Pfam PF01632 Ribosomal protein L35 3 60 1.9E-22 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08530 a9c26c8d6edd89f246a0094e125e38db 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 3 63 2.5E-24 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AYJ52_08530 a9c26c8d6edd89f246a0094e125e38db 64 Gene3D G3DSA:2.40.50.530 4 63 5.8E-22 T 11-10-2018 AYJ52_08530 a9c26c8d6edd89f246a0094e125e38db 64 SUPERFAMILY SSF143034 3 63 2.09E-21 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08530 a9c26c8d6edd89f246a0094e125e38db 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.1E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AYJ52_08530 a9c26c8d6edd89f246a0094e125e38db 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.1E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AYJ52_08530 a9c26c8d6edd89f246a0094e125e38db 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.1E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AYJ52_08530 a9c26c8d6edd89f246a0094e125e38db 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_13270 6a6df106d5ecac12f6bdd59944409834 196 Pfam PF04264 YceI-like domain 26 188 3.2E-41 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AYJ52_13270 6a6df106d5ecac12f6bdd59944409834 196 SMART SM00867 25 189 1.7E-66 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AYJ52_13270 6a6df106d5ecac12f6bdd59944409834 196 SUPERFAMILY SSF101874 23 189 3.53E-51 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AYJ52_13270 6a6df106d5ecac12f6bdd59944409834 196 Gene3D G3DSA:2.40.128.110 24 190 4.6E-50 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AYJ52_10620 82708abcd5c1647c6d49639590ab77b9 402 Gene3D G3DSA:3.30.9.50 84 278 4.0E-93 T 11-10-2018 AYJ52_10620 82708abcd5c1647c6d49639590ab77b9 402 SUPERFAMILY SSF51905 4 392 4.63E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10620 82708abcd5c1647c6d49639590ab77b9 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 399 1.2E-108 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AYJ52_10620 82708abcd5c1647c6d49639590ab77b9 402 Gene3D G3DSA:3.50.50.60 5 347 4.0E-93 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10620 82708abcd5c1647c6d49639590ab77b9 402 Pfam PF01494 FAD binding domain 4 357 3.5E-35 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AYJ52_10620 82708abcd5c1647c6d49639590ab77b9 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 9.6E-19 T 11-10-2018 AYJ52_10620 82708abcd5c1647c6d49639590ab77b9 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 9.6E-19 T 11-10-2018 AYJ52_10620 82708abcd5c1647c6d49639590ab77b9 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 9.6E-19 T 11-10-2018 AYJ52_10620 82708abcd5c1647c6d49639590ab77b9 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 9.6E-19 T 11-10-2018 AYJ52_13640 ee5d208b5728fc62ccc8b44c6cd87c32 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 2.3E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_13640 ee5d208b5728fc62ccc8b44c6cd87c32 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 49 69 2.3E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_13640 ee5d208b5728fc62ccc8b44c6cd87c32 285 PRINTS PR00377 Inositol monophosphatase superfamily signature 71 87 2.3E-5 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_13640 ee5d208b5728fc62ccc8b44c6cd87c32 285 Pfam PF00459 Inositol monophosphatase family 16 260 3.6E-39 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_13640 ee5d208b5728fc62ccc8b44c6cd87c32 285 Gene3D G3DSA:3.30.540.10 9 160 6.6E-33 T 11-10-2018 AYJ52_13640 ee5d208b5728fc62ccc8b44c6cd87c32 285 Gene3D G3DSA:3.40.190.80 164 270 2.5E-25 T 11-10-2018 AYJ52_13640 ee5d208b5728fc62ccc8b44c6cd87c32 285 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 92 105 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AYJ52_13640 ee5d208b5728fc62ccc8b44c6cd87c32 285 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 12 267 34.996 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AYJ52_13640 ee5d208b5728fc62ccc8b44c6cd87c32 285 SUPERFAMILY SSF56655 10 278 2.88E-57 T 11-10-2018 AYJ52_17990 8492dd7751039dc243894ca68ad1acfb 257 Gene3D G3DSA:3.40.190.10 107 215 1.1E-25 T 11-10-2018 AYJ52_17990 8492dd7751039dc243894ca68ad1acfb 257 Pfam PF13531 Bacterial extracellular solute-binding protein 25 252 8.1E-25 T 11-10-2018 AYJ52_17990 8492dd7751039dc243894ca68ad1acfb 257 SUPERFAMILY SSF53850 24 254 1.13E-32 T 11-10-2018 AYJ52_17990 8492dd7751039dc243894ca68ad1acfb 257 Gene3D G3DSA:3.40.190.10 27 251 1.1E-25 T 11-10-2018 AYJ52_11670 c2d235a4f4f36a85ad722594dbaeae27 247 SMART SM00382 34 219 3.7E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_11670 c2d235a4f4f36a85ad722594dbaeae27 247 Gene3D G3DSA:3.40.50.300 8 247 3.4E-69 T 11-10-2018 AYJ52_11670 c2d235a4f4f36a85ad722594dbaeae27 247 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 10 246 5.5E-120 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AYJ52_11670 c2d235a4f4f36a85ad722594dbaeae27 247 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 221 242 8.3E-10 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AYJ52_11670 c2d235a4f4f36a85ad722594dbaeae27 247 SUPERFAMILY SSF52540 10 243 4.38E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_11670 c2d235a4f4f36a85ad722594dbaeae27 247 Pfam PF00005 ABC transporter 25 172 3.0E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_11670 c2d235a4f4f36a85ad722594dbaeae27 247 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_02665 774a2883ca33b13d52ae7b828a079092 109 Gene3D G3DSA:3.90.470.10 1 109 3.9E-45 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_02665 774a2883ca33b13d52ae7b828a079092 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.6E-46 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02665 774a2883ca33b13d52ae7b828a079092 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 25.555 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02665 774a2883ca33b13d52ae7b828a079092 109 SUPERFAMILY SSF54843 1 107 9.29E-42 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_02665 774a2883ca33b13d52ae7b828a079092 109 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 3.6E-36 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AYJ52_02665 774a2883ca33b13d52ae7b828a079092 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_07460 a4805d1d517a5481f5a52d076f8a34fc 569 Pfam PF00999 Sodium/hydrogen exchanger family 13 388 2.2E-71 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AYJ52_07460 a4805d1d517a5481f5a52d076f8a34fc 569 Gene3D G3DSA:3.40.50.720 423 566 1.7E-25 T 11-10-2018 AYJ52_07460 a4805d1d517a5481f5a52d076f8a34fc 569 SUPERFAMILY SSF51735 425 559 1.02E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_07460 a4805d1d517a5481f5a52d076f8a34fc 569 Gene3D G3DSA:1.20.1530.20 4 399 1.2E-76 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AYJ52_07460 a4805d1d517a5481f5a52d076f8a34fc 569 Pfam PF02254 TrkA-N domain 429 542 2.9E-16 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AYJ52_00935 45334869f2c9467bbf0847fa494e199e 144 Pfam PF01906 Putative heavy-metal-binding 58 143 6.1E-25 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AYJ52_00935 45334869f2c9467bbf0847fa494e199e 144 SUPERFAMILY SSF117782 57 143 3.66E-25 T 11-10-2018 IPR035439 UPF0145 domain superfamily AYJ52_00935 45334869f2c9467bbf0847fa494e199e 144 Gene3D G3DSA:3.30.110.70 47 144 1.8E-25 T 11-10-2018 AYJ52_06960 ca9ff542defc5926dddf274ff707c3db 128 Gene3D G3DSA:3.10.180.10 7 125 1.5E-39 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_06960 ca9ff542defc5926dddf274ff707c3db 128 SUPERFAMILY SSF54593 1 123 8.8E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_06960 ca9ff542defc5926dddf274ff707c3db 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 122 5.3E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 PIRSF PIRSF000722 1 391 2.7E-129 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 PRINTS PR00471 Acetate kinase family signature 368 380 5.1E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 PRINTS PR00471 Acetate kinase family signature 194 215 5.1E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 PRINTS PR00471 Acetate kinase family signature 313 329 5.1E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 PRINTS PR00471 Acetate kinase family signature 165 178 5.1E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 PRINTS PR00471 Acetate kinase family signature 291 304 5.1E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 PRINTS PR00471 Acetate kinase family signature 5 16 5.1E-41 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 Pfam PF00871 Acetokinase family 5 381 7.3E-127 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 Gene3D G3DSA:3.30.420.40 189 398 5.8E-70 T 11-10-2018 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 Gene3D G3DSA:3.30.420.40 1 186 7.6E-61 T 11-10-2018 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 SUPERFAMILY SSF53067 148 387 3.11E-78 T 11-10-2018 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 TIGRFAM TIGR00016 ackA: acetate kinase 4 386 1.0E-129 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 Hamap MF_00020 Acetate kinase [ackA]. 1 390 159.026 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AYJ52_07645 1036c26566faccbcb83ebc4aaed47f2e 400 SUPERFAMILY SSF53067 4 187 3.89E-58 T 11-10-2018 AYJ52_03875 064257ed9ac0d6c4d71d02498fbaf659 182 Gene3D G3DSA:2.60.120.10 91 182 1.8E-15 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_03875 064257ed9ac0d6c4d71d02498fbaf659 182 SMART SM00530 11 66 6.1E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_03875 064257ed9ac0d6c4d71d02498fbaf659 182 SUPERFAMILY SSF51182 59 178 2.28E-19 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_03875 064257ed9ac0d6c4d71d02498fbaf659 182 SUPERFAMILY SSF47413 5 72 3.1E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_03875 064257ed9ac0d6c4d71d02498fbaf659 182 Gene3D G3DSA:1.10.260.40 2 77 1.3E-17 T 11-10-2018 AYJ52_03875 064257ed9ac0d6c4d71d02498fbaf659 182 Pfam PF01381 Helix-turn-helix 14 64 2.6E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_03875 064257ed9ac0d6c4d71d02498fbaf659 182 Pfam PF07883 Cupin domain 110 172 5.8E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AYJ52_14670 1e5e2a9ad014ba76cfa59412857b3f7b 361 Gene3D G3DSA:1.10.287.470 130 231 1.3E-7 T 11-10-2018 AYJ52_14670 1e5e2a9ad014ba76cfa59412857b3f7b 361 Pfam PF13437 HlyD family secretion protein 232 350 6.9E-16 T 11-10-2018 AYJ52_14670 1e5e2a9ad014ba76cfa59412857b3f7b 361 Gene3D G3DSA:1.10.287.470 99 126 4.5E-15 T 11-10-2018 AYJ52_14670 1e5e2a9ad014ba76cfa59412857b3f7b 361 SUPERFAMILY SSF111369 187 309 1.7E-18 T 11-10-2018 AYJ52_14670 1e5e2a9ad014ba76cfa59412857b3f7b 361 SUPERFAMILY SSF111369 63 120 3.53E-11 T 11-10-2018 AYJ52_14670 1e5e2a9ad014ba76cfa59412857b3f7b 361 Gene3D G3DSA:2.40.50.100 65 98 4.5E-15 T 11-10-2018 AYJ52_14670 1e5e2a9ad014ba76cfa59412857b3f7b 361 Gene3D G3DSA:2.40.30.170 246 361 5.6E-31 T 11-10-2018 AYJ52_14670 1e5e2a9ad014ba76cfa59412857b3f7b 361 Pfam PF13533 Biotin-lipoyl like 66 111 9.3E-16 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AYJ52_14670 1e5e2a9ad014ba76cfa59412857b3f7b 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 361 1.3E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_14670 1e5e2a9ad014ba76cfa59412857b3f7b 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 1.3E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 SUPERFAMILY SSF69065 12 164 4.53E-49 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 SMART SM00358 162 229 3.8E-18 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 SUPERFAMILY SSF54768 114 228 1.73E-27 T 11-10-2018 AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 Gene3D G3DSA:1.10.1520.10 9 154 6.4E-45 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 Pfam PF14622 Ribonuclease-III-like 25 147 6.1E-34 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 15 227 1.6E-71 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 SMART SM00535 25 155 3.3E-52 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 Hamap MF_00104 Ribonuclease 3 [rnc]. 13 225 29.49 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 Gene3D G3DSA:3.30.160.20 160 230 1.7E-18 T 11-10-2018 AYJ52_18615 842805c04acde632bae927d6ef33f1e3 230 Pfam PF00035 Double-stranded RNA binding motif 162 228 1.3E-12 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 813 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 SMART SM00958 228 355 1.1E-73 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 SUPERFAMILY SSF81886 618 895 5.75E-78 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 Gene3D G3DSA:3.90.1440.10 229 365 4.2E-171 T 11-10-2018 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 Gene3D G3DSA:1.10.3060.10 619 830 3.1E-72 T 11-10-2018 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 SUPERFAMILY SSF52540 413 616 2.01E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 SUPERFAMILY SSF52540 6 412 1.4E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 Pfam PF01043 SecA preprotein cross-linking domain 232 355 3.9E-37 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 PRINTS PR00906 SecA protein signature 336 358 1.8E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 PRINTS PR00906 SecA protein signature 373 390 1.8E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 PRINTS PR00906 SecA protein signature 63 87 1.8E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 PRINTS PR00906 SecA protein signature 410 423 1.8E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 PRINTS PR00906 SecA protein signature 101 115 1.8E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 PRINTS PR00906 SecA protein signature 117 127 1.8E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 PRINTS PR00906 SecA protein signature 170 190 1.8E-70 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 Pfam PF02810 SEC-C motif 887 905 6.5E-10 T 11-10-2018 IPR004027 SEC-C motif AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 830 19.643 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 Pfam PF07516 SecA Wing and Scaffold domain 615 827 9.7E-66 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 Pfam PF07517 SecA DEAD-like domain 8 399 6.7E-129 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 Gene3D G3DSA:3.40.50.300 22 412 4.2E-171 T 11-10-2018 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 Gene3D G3DSA:3.40.50.300 414 618 9.9E-84 T 11-10-2018 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 ProSitePatterns PS01312 SecA family signature. 498 513 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 SUPERFAMILY SSF81767 227 365 1.57E-41 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AYJ52_01760 f132b226c394b4c9346643cd25f1299d 906 SMART SM00957 6 399 4.2E-297 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AYJ52_03115 9cdc5fa416e488e02f8f360da7496a60 141 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 7.5E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03115 9cdc5fa416e488e02f8f360da7496a60 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.0E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03115 9cdc5fa416e488e02f8f360da7496a60 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 4 29 4.3E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AYJ52_03115 9cdc5fa416e488e02f8f360da7496a60 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 40 58 4.3E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AYJ52_03115 9cdc5fa416e488e02f8f360da7496a60 141 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 26 115 1.7E-14 T 11-10-2018 IPR031982 Type IV minor pilin ComP AYJ52_03115 9cdc5fa416e488e02f8f360da7496a60 141 Gene3D G3DSA:3.30.700.10 5 139 3.6E-23 T 11-10-2018 AYJ52_03115 9cdc5fa416e488e02f8f360da7496a60 141 SUPERFAMILY SSF54523 5 122 2.9E-23 T 11-10-2018 AYJ52_13810 aa551df354fe28f03285fcf1b5451da4 199 SMART SM00855 5 160 1.3E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AYJ52_13810 aa551df354fe28f03285fcf1b5451da4 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 194 1.1E-43 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AYJ52_13810 aa551df354fe28f03285fcf1b5451da4 199 Gene3D G3DSA:3.40.50.1240 4 195 4.0E-44 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AYJ52_13810 aa551df354fe28f03285fcf1b5451da4 199 SUPERFAMILY SSF53254 4 191 1.37E-44 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AYJ52_13810 aa551df354fe28f03285fcf1b5451da4 199 PIRSF PIRSF000709 3 197 2.7E-11 T 11-10-2018 AYJ52_17435 7d8392249aa8c50fa28a90b8ec012475 486 SUPERFAMILY SSF46785 3 76 5.1E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_17435 7d8392249aa8c50fa28a90b8ec012475 486 Gene3D G3DSA:3.40.640.10 143 362 1.2E-87 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_17435 7d8392249aa8c50fa28a90b8ec012475 486 Pfam PF00155 Aminotransferase class I and II 115 457 6.1E-26 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_17435 7d8392249aa8c50fa28a90b8ec012475 486 Gene3D G3DSA:1.10.10.10 1 68 2.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_17435 7d8392249aa8c50fa28a90b8ec012475 486 SMART SM00345 7 66 1.2E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_17435 7d8392249aa8c50fa28a90b8ec012475 486 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.5E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_17435 7d8392249aa8c50fa28a90b8ec012475 486 SUPERFAMILY SSF53383 96 469 2.39E-77 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_17435 7d8392249aa8c50fa28a90b8ec012475 486 Gene3D G3DSA:3.90.1150.10 99 466 1.2E-87 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_02815 35c422661248b30618a7929326b6f174 620 SMART SM00490 268 349 3.8E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_02815 35c422661248b30618a7929326b6f174 620 Pfam PF00271 Helicase conserved C-terminal domain 250 349 2.1E-25 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_02815 35c422661248b30618a7929326b6f174 620 Pfam PF00270 DEAD/DEAH box helicase 27 201 1.9E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AYJ52_02815 35c422661248b30618a7929326b6f174 620 SMART SM00487 22 231 6.0E-54 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ52_02815 35c422661248b30618a7929326b6f174 620 Gene3D G3DSA:3.40.50.300 222 389 1.5E-47 T 11-10-2018 AYJ52_02815 35c422661248b30618a7929326b6f174 620 SUPERFAMILY SSF52540 84 370 2.62E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02815 35c422661248b30618a7929326b6f174 620 Gene3D G3DSA:3.40.50.300 1 220 1.8E-72 T 11-10-2018 AYJ52_02815 35c422661248b30618a7929326b6f174 620 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 162 170 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 SUPERFAMILY SSF54897 39 113 3.46E-8 T 11-10-2018 AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 Gene3D G3DSA:3.40.50.200 116 392 3.9E-90 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 SUPERFAMILY SSF52743 117 374 5.63E-73 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 337 347 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 Gene3D G3DSA:3.30.70.80 34 113 9.8E-13 T 11-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 Pfam PF00082 Subtilase family 146 379 9.8E-33 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 150 161 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 PRINTS PR00723 Subtilisin serine protease family (S8) signature 336 352 1.6E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 1.6E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AYJ52_15580 a0d60167e816a8969fda44728acc0430 393 PRINTS PR00723 Subtilisin serine protease family (S8) signature 145 164 1.6E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AYJ52_12935 81edcb2d7b30443a6c7597cff571aec7 161 Gene3D G3DSA:3.40.30.10 1 161 2.0E-70 T 11-10-2018 AYJ52_12935 81edcb2d7b30443a6c7597cff571aec7 161 SUPERFAMILY SSF52833 3 159 1.4E-60 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_12935 81edcb2d7b30443a6c7597cff571aec7 161 PRINTS PR01011 Glutathione peroxidase family signature 123 132 1.5E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AYJ52_12935 81edcb2d7b30443a6c7597cff571aec7 161 PRINTS PR01011 Glutathione peroxidase family signature 57 73 1.5E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AYJ52_12935 81edcb2d7b30443a6c7597cff571aec7 161 PRINTS PR01011 Glutathione peroxidase family signature 22 39 1.5E-21 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AYJ52_12935 81edcb2d7b30443a6c7597cff571aec7 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 11-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 AYJ52_12935 81edcb2d7b30443a6c7597cff571aec7 161 PIRSF PIRSF000303 1 161 1.4E-66 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AYJ52_12935 81edcb2d7b30443a6c7597cff571aec7 161 Pfam PF00255 Glutathione peroxidase 4 110 1.8E-40 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AYJ52_12935 81edcb2d7b30443a6c7597cff571aec7 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AYJ52_10320 76878e706bb5cc5041eee4016fedacaa 558 Pfam PF00884 Sulfatase 38 444 8.4E-74 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AYJ52_10320 76878e706bb5cc5041eee4016fedacaa 558 Gene3D G3DSA:3.30.1120.10 482 557 1.9E-14 T 11-10-2018 AYJ52_10320 76878e706bb5cc5041eee4016fedacaa 558 SUPERFAMILY SSF53649 36 551 3.05E-134 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AYJ52_10320 76878e706bb5cc5041eee4016fedacaa 558 Gene3D G3DSA:3.40.720.10 35 474 1.6E-131 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AYJ52_10320 76878e706bb5cc5041eee4016fedacaa 558 ProSitePatterns PS00149 Sulfatases signature 2. 138 148 - T 11-10-2018 IPR024607 Sulfatase, conserved site AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 Gene3D G3DSA:3.30.450.20 393 514 4.9E-20 T 11-10-2018 AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 Pfam PF00563 EAL domain 699 933 1.9E-72 T 11-10-2018 IPR001633 EAL domain AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 401 519 4.0E-14 T 11-10-2018 IPR000014 PAS domain AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 316 395 2.2E-6 T 11-10-2018 IPR000014 PAS domain AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 Gene3D G3DSA:3.20.20.450 698 945 2.5E-95 T 11-10-2018 IPR035919 EAL domain superfamily AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 524 682 2.2E-20 T 11-10-2018 IPR000160 GGDEF domain AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 SUPERFAMILY SSF55785 306 390 1.92E-10 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 Pfam PF13426 PAS domain 407 511 7.7E-9 T 11-10-2018 IPR000014 PAS domain AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 SUPERFAMILY SSF141868 698 946 6.67E-85 T 11-10-2018 IPR035919 EAL domain superfamily AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 SMART SM00086 470 512 0.018 T 11-10-2018 IPR001610 PAC motif AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 SMART SM00086 344 388 1.6E-5 T 11-10-2018 IPR001610 PAC motif AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 SMART SM00091 396 464 3.1E-4 T 11-10-2018 IPR000014 PAS domain AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 Pfam PF00990 Diguanylate cyclase, GGDEF domain 524 679 1.2E-29 T 11-10-2018 IPR000160 GGDEF domain AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 SMART SM00267 512 684 1.2E-29 T 11-10-2018 IPR000160 GGDEF domain AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 SMART SM00052 693 938 7.1E-101 T 11-10-2018 IPR001633 EAL domain AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 SUPERFAMILY SSF55073 528 684 8.63E-33 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 SUPERFAMILY SSF55785 407 519 2.62E-16 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 Gene3D G3DSA:3.30.70.270 517 697 2.0E-38 T 11-10-2018 AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 Gene3D G3DSA:3.30.450.20 284 392 3.5E-17 T 11-10-2018 AYJ52_17650 c94df3921f9ebbfda4ce3e8b59e74516 950 Pfam PF08447 PAS fold 314 380 2.0E-12 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AYJ52_12810 3bb40c53119d67c085662899a12a0da2 293 Gene3D G3DSA:3.60.130.10 5 285 3.2E-91 T 11-10-2018 AYJ52_12810 3bb40c53119d67c085662899a12a0da2 293 SUPERFAMILY SSF51197 9 282 3.07E-90 T 11-10-2018 AYJ52_12810 3bb40c53119d67c085662899a12a0da2 293 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 12 274 7.7E-66 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 773 878 6.5E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Pfam PF13493 Domain of unknown function (DUF4118) 403 500 1.1E-18 T 11-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 SUPERFAMILY SSF47384 650 724 2.55E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Pfam PF00512 His Kinase A (phospho-acceptor) domain 657 723 1.2E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 SMART SM00387 768 881 5.8E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 SMART SM00388 656 724 9.6E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 SUPERFAMILY SSF52402 251 368 1.09E-7 T 11-10-2018 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 865 878 3.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 858 3.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 806 820 3.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 PRINTS PR00344 Bacterial sensor protein C-terminal signature 824 834 3.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Gene3D G3DSA:3.40.50.620 228 370 3.0E-6 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Gene3D G3DSA:3.30.565.10 736 880 1.2E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 SUPERFAMILY SSF55874 714 881 2.23E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Gene3D G3DSA:1.20.120.620 394 500 1.5E-18 T 11-10-2018 IPR038318 KdpD, transmembrane domain superfamily AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 229 1.0E-91 T 11-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 SUPERFAMILY SSF52540 21 190 8.21E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Gene3D G3DSA:3.30.450.40 512 648 3.4E-21 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Gene3D G3DSA:3.40.50.300 19 227 1.5E-94 T 11-10-2018 AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Pfam PF00582 Universal stress protein family 251 366 1.9E-6 T 11-10-2018 IPR006016 UspA AYJ52_16555 9b6687a5ba57122a2cf4a2f624428417 884 Gene3D G3DSA:1.10.287.130 649 723 3.5E-18 T 11-10-2018 AYJ52_17750 ac974ea6655dda4f9e843e24559a330f 351 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 340 7.8E-118 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AYJ52_17750 ac974ea6655dda4f9e843e24559a330f 351 Pfam PF00591 Glycosyl transferase family, a/b domain 77 332 1.5E-100 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AYJ52_17750 ac974ea6655dda4f9e843e24559a330f 351 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 341 37.702 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AYJ52_17750 ac974ea6655dda4f9e843e24559a330f 351 Gene3D G3DSA:3.40.1030.10 73 350 3.5E-102 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AYJ52_17750 ac974ea6655dda4f9e843e24559a330f 351 SUPERFAMILY SSF52418 77 344 6.15E-88 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AYJ52_17750 ac974ea6655dda4f9e843e24559a330f 351 Pfam PF02885 Glycosyl transferase family, helical bundle domain 9 68 8.3E-17 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AYJ52_17750 ac974ea6655dda4f9e843e24559a330f 351 Gene3D G3DSA:1.20.970.10 1 72 2.9E-31 T 11-10-2018 AYJ52_17750 ac974ea6655dda4f9e843e24559a330f 351 SUPERFAMILY SSF47648 3 72 2.75E-19 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AYJ52_03315 32e64c2e0a73ee5e1940a48cd0b542c8 333 Gene3D G3DSA:3.40.190.10 29 297 7.8E-134 T 11-10-2018 AYJ52_03315 32e64c2e0a73ee5e1940a48cd0b542c8 333 SUPERFAMILY SSF53850 23 329 3.63E-86 T 11-10-2018 AYJ52_03315 32e64c2e0a73ee5e1940a48cd0b542c8 333 Pfam PF13531 Bacterial extracellular solute-binding protein 42 282 2.4E-44 T 11-10-2018 AYJ52_03315 32e64c2e0a73ee5e1940a48cd0b542c8 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 17 328 2.8E-141 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AYJ52_03315 32e64c2e0a73ee5e1940a48cd0b542c8 333 Gene3D G3DSA:3.40.190.10 116 327 7.8E-134 T 11-10-2018 AYJ52_05385 1b96570d62237972f118d9be8ea33491 250 SUPERFAMILY SSF48008 94 230 4.45E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_05385 1b96570d62237972f118d9be8ea33491 250 Pfam PF07729 FCD domain 96 222 1.3E-23 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_05385 1b96570d62237972f118d9be8ea33491 250 Gene3D G3DSA:1.10.10.10 1 74 1.7E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_05385 1b96570d62237972f118d9be8ea33491 250 SMART SM00345 7 66 3.4E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_05385 1b96570d62237972f118d9be8ea33491 250 SUPERFAMILY SSF46785 2 70 1.28E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_05385 1b96570d62237972f118d9be8ea33491 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.2E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_05385 1b96570d62237972f118d9be8ea33491 250 SMART SM00895 95 223 4.6E-21 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_05385 1b96570d62237972f118d9be8ea33491 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 3.9E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_05385 1b96570d62237972f118d9be8ea33491 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 3.9E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_05385 1b96570d62237972f118d9be8ea33491 250 Gene3D G3DSA:1.20.120.530 94 229 5.8E-30 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_08485 cd6cb6b64e1b3031016ace39538d86ba 89 Gene3D G3DSA:3.30.1340.10 1 88 1.3E-25 T 11-10-2018 IPR035895 HPr-like superfamily AYJ52_08485 cd6cb6b64e1b3031016ace39538d86ba 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.6E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AYJ52_08485 cd6cb6b64e1b3031016ace39538d86ba 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.6E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AYJ52_08485 cd6cb6b64e1b3031016ace39538d86ba 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.6E-11 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AYJ52_08485 cd6cb6b64e1b3031016ace39538d86ba 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.6E-23 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AYJ52_08485 cd6cb6b64e1b3031016ace39538d86ba 89 SUPERFAMILY SSF55594 1 87 3.93E-24 T 11-10-2018 IPR035895 HPr-like superfamily AYJ52_08485 cd6cb6b64e1b3031016ace39538d86ba 89 Pfam PF00381 PTS HPr component phosphorylation site 4 82 5.4E-23 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 Gene3D G3DSA:3.30.420.40 22 374 8.3E-112 T 11-10-2018 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 Gene3D G3DSA:3.30.420.40 191 361 8.3E-112 T 11-10-2018 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 SUPERFAMILY SSF53067 19 194 1.01E-53 T 11-10-2018 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 SUPERFAMILY SSF100934 503 613 1.12E-29 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 Pfam PF00012 Hsp70 protein 21 594 4.1E-174 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 Gene3D G3DSA:2.60.34.10 380 518 3.4E-48 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 613 8.0E-265 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 615 42.666 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 PRINTS PR00301 70kDa heat shock protein signature 212 222 5.4E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 PRINTS PR00301 70kDa heat shock protein signature 329 345 5.4E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 PRINTS PR00301 70kDa heat shock protein signature 149 169 5.4E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 5.4E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 PRINTS PR00301 70kDa heat shock protein signature 465 481 5.4E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 PRINTS PR00301 70kDa heat shock protein signature 360 380 5.4E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 5.4E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 PRINTS PR00301 70kDa heat shock protein signature 384 403 5.4E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 Gene3D G3DSA:1.20.1270.10 519 614 9.4E-23 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 206 219 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 Gene3D G3DSA:3.90.640.10 239 311 8.3E-112 T 11-10-2018 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 SUPERFAMILY SSF53067 201 376 1.11E-47 T 11-10-2018 AYJ52_13700 f038620b2e3407d7a07f82a596f08500 619 SUPERFAMILY SSF100920 383 535 3.53E-48 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AYJ52_00670 6ddd6f4f973d48561e154c5bec1be6a2 113 SUPERFAMILY SSF46767 15 98 2.49E-23 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AYJ52_00670 6ddd6f4f973d48561e154c5bec1be6a2 113 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 16 97 5.5E-23 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AYJ52_00670 6ddd6f4f973d48561e154c5bec1be6a2 113 Gene3D G3DSA:1.10.10.10 13 113 1.3E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_07585 d430a420645dbe59db83beaaec48c4f7 197 SUPERFAMILY SSF53335 9 171 1.81E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_07585 d430a420645dbe59db83beaaec48c4f7 197 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 195 9.2E-80 T 11-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AYJ52_07585 d430a420645dbe59db83beaaec48c4f7 197 Gene3D G3DSA:3.40.50.150 2 173 1.7E-26 T 11-10-2018 AYJ52_07585 d430a420645dbe59db83beaaec48c4f7 197 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 2.1E-76 T 11-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AYJ52_13660 1926e707da4c25cbabd50effaec82cec 168 Pfam PF03737 Aldolase/RraA 8 162 1.7E-45 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AYJ52_13660 1926e707da4c25cbabd50effaec82cec 168 SUPERFAMILY SSF89562 27 167 3.27E-45 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AYJ52_13660 1926e707da4c25cbabd50effaec82cec 168 TIGRFAM TIGR01935 NOT-MenG: RraA family 9 162 1.8E-60 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AYJ52_13660 1926e707da4c25cbabd50effaec82cec 168 Gene3D G3DSA:3.50.30.40 4 168 5.3E-61 T 11-10-2018 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 2.6E-62 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 SUPERFAMILY SSF48179 626 716 2.72E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 231 2.5E-35 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 SUPERFAMILY SSF51735 314 497 1.32E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 SUPERFAMILY SSF48179 497 602 4.85E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 Gene3D G3DSA:1.10.1040.50 499 711 6.8E-78 T 11-10-2018 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 495 519 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 498 593 8.7E-24 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 717 51.894 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 716 0.0 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 Gene3D G3DSA:3.90.226.10 1 314 7.6E-95 T 11-10-2018 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 Gene3D G3DSA:3.40.50.720 315 498 1.2E-67 T 11-10-2018 AYJ52_06740 d1f0b0323184d121007ed096f5a57495 717 SUPERFAMILY SSF52096 6 308 2.31E-65 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_15265 9dc553c650439456883b815e8b9dc552 225 Pfam PF04239 Protein of unknown function (DUF421) 101 185 6.5E-14 T 11-10-2018 IPR007353 Protein of unknown function DUF421 AYJ52_15265 9dc553c650439456883b815e8b9dc552 225 Gene3D G3DSA:3.30.240.20 91 164 3.0E-14 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.4E-45 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 SUPERFAMILY SSF52440 1 113 3.6E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 5.8E-37 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 SUPERFAMILY SSF51230 581 655 2.49E-19 T 11-10-2018 IPR011053 Single hybrid motif AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 SUPERFAMILY SSF56059 83 347 7.95E-68 T 11-10-2018 AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 SUPERFAMILY SSF51246 331 448 3.14E-37 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 Gene3D G3DSA:3.30.470.130 1 450 5.8E-195 T 11-10-2018 AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 612 629 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 SMART SM00878 336 443 1.3E-49 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 Pfam PF00364 Biotin-requiring enzyme 589 654 1.1E-14 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 Gene3D G3DSA:2.40.50.100 580 658 4.9E-21 T 11-10-2018 AYJ52_12425 fd144aee63744d66b7d5afd86fd6407d 663 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 9.2E-75 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AYJ52_00765 68e3b34192c08cafe5e519cf4e562013 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 9 119 2.5E-34 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AYJ52_00765 68e3b34192c08cafe5e519cf4e562013 121 PIRSF PIRSF000169 1 121 1.8E-40 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AYJ52_00765 68e3b34192c08cafe5e519cf4e562013 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 12 109 6.5E-7 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00765 68e3b34192c08cafe5e519cf4e562013 121 Gene3D G3DSA:1.20.1300.10 1 120 3.8E-30 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00765 68e3b34192c08cafe5e519cf4e562013 121 SUPERFAMILY SSF81343 4 119 2.62E-26 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00445 5566bfa5d68d7f4e9aeddaca5c5f2805 651 SUPERFAMILY SSF55718 525 647 3.3E-22 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_00445 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Pfam PF14864 Alkyl sulfatase C-terminal 525 647 1.6E-17 T 11-10-2018 IPR029229 Alkyl sulfatase, C-terminal AYJ52_00445 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Gene3D G3DSA:1.25.40.880 376 516 4.1E-55 T 11-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily AYJ52_00445 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Gene3D G3DSA:3.30.1050.10 518 649 4.6E-23 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_00445 5566bfa5d68d7f4e9aeddaca5c5f2805 651 SUPERFAMILY SSF56281 26 517 5.74E-141 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_00445 5566bfa5d68d7f4e9aeddaca5c5f2805 651 SMART SM00849 119 340 1.0E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_00445 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Gene3D G3DSA:3.60.15.30 23 375 8.1E-147 T 11-10-2018 AYJ52_00445 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Pfam PF00753 Metallo-beta-lactamase superfamily 115 326 4.5E-32 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_00445 5566bfa5d68d7f4e9aeddaca5c5f2805 651 Pfam PF14863 Alkyl sulfatase dimerisation 379 514 1.5E-54 T 11-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AYJ52_08700 a34a21426a697887c116331b2f0a3b7b 112 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 2.4E-23 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AYJ52_08700 a34a21426a697887c116331b2f0a3b7b 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 100 3.1E-18 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AYJ52_08700 a34a21426a697887c116331b2f0a3b7b 112 SUPERFAMILY SSF69754 1 102 7.06E-24 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AYJ52_08700 a34a21426a697887c116331b2f0a3b7b 112 Gene3D G3DSA:3.30.160.100 1 109 2.3E-26 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AYJ52_11250 0967382d81727227ac7319c8eb123527 475 Pfam PF00691 OmpA family 372 467 4.6E-22 T 11-10-2018 IPR006665 OmpA-like domain AYJ52_11250 0967382d81727227ac7319c8eb123527 475 SUPERFAMILY SSF103088 366 472 3.14E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_11250 0967382d81727227ac7319c8eb123527 475 Gene3D G3DSA:3.30.1330.60 337 475 1.5E-37 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_11250 0967382d81727227ac7319c8eb123527 475 ProSitePatterns PS01068 OmpA-like domain. 405 449 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AYJ52_11250 0967382d81727227ac7319c8eb123527 475 PRINTS PR01021 OMPA domain signature 373 395 1.4E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_11250 0967382d81727227ac7319c8eb123527 475 PRINTS PR01021 OMPA domain signature 403 418 1.4E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_11250 0967382d81727227ac7319c8eb123527 475 PRINTS PR01021 OMPA domain signature 418 434 1.4E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 Gene3D G3DSA:3.30.499.20 8 375 4.8E-161 T 11-10-2018 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 Gene3D G3DSA:1.10.1440.20 616 675 3.0E-19 T 11-10-2018 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 Pfam PF00330 Aconitase family (aconitate hydratase) 76 587 3.4E-181 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 SUPERFAMILY SSF53732 7 651 1.15E-225 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 Gene3D G3DSA:3.30.499.10 376 615 3.5E-98 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 PRINTS PR00415 Aconitase family signature 149 162 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 PRINTS PR00415 Aconitase family signature 173 181 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 PRINTS PR00415 Aconitase family signature 518 531 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 PRINTS PR00415 Aconitase family signature 456 467 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 PRINTS PR00415 Aconitase family signature 296 309 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 PRINTS PR00415 Aconitase family signature 206 219 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 PRINTS PR00415 Aconitase family signature 220 235 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 PRINTS PR00415 Aconitase family signature 282 295 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 PRINTS PR00415 Aconitase family signature 375 389 1.2E-40 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 Gene3D G3DSA:3.20.19.10 678 917 3.5E-111 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 23 916 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 ProSitePatterns PS01244 Aconitase family signature 2. 518 531 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 ProSitePatterns PS00450 Aconitase family signature 1. 452 468 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 SUPERFAMILY SSF52016 655 915 3.53E-90 T 11-10-2018 AYJ52_08185 1da9d8d63b1ea71eadfed0a644438854 918 Pfam PF00694 Aconitase C-terminal domain 716 842 1.3E-50 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AYJ52_05595 24c66e9aa9832acfd773e9ef0b7b99b7 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.2E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_05595 24c66e9aa9832acfd773e9ef0b7b99b7 293 Gene3D G3DSA:1.10.10.10 4 85 3.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_05595 24c66e9aa9832acfd773e9ef0b7b99b7 293 SUPERFAMILY SSF53850 85 287 1.79E-32 T 11-10-2018 AYJ52_05595 24c66e9aa9832acfd773e9ef0b7b99b7 293 Gene3D G3DSA:3.40.190.290 88 284 1.4E-28 T 11-10-2018 AYJ52_05595 24c66e9aa9832acfd773e9ef0b7b99b7 293 Pfam PF03466 LysR substrate binding domain 85 284 3.1E-28 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_05595 24c66e9aa9832acfd773e9ef0b7b99b7 293 SUPERFAMILY SSF46785 3 109 5.99E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_10070 45b8815a55dfeec79edfd16c6c11ba99 207 SUPERFAMILY SSF46689 2 84 1.95E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_10070 45b8815a55dfeec79edfd16c6c11ba99 207 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 4 194 7.6E-71 T 11-10-2018 IPR017757 Transcriptional repressor BetI AYJ52_10070 45b8815a55dfeec79edfd16c6c11ba99 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_10070 45b8815a55dfeec79edfd16c6c11ba99 207 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 194 2.9E-28 T 11-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AYJ52_10070 45b8815a55dfeec79edfd16c6c11ba99 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_10070 45b8815a55dfeec79edfd16c6c11ba99 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_10070 45b8815a55dfeec79edfd16c6c11ba99 207 SUPERFAMILY SSF48498 83 195 1.67E-16 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_10070 45b8815a55dfeec79edfd16c6c11ba99 207 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 200 83.127 T 11-10-2018 IPR017757 Transcriptional repressor BetI AYJ52_10070 45b8815a55dfeec79edfd16c6c11ba99 207 Gene3D G3DSA:1.10.357.10 1 204 4.3E-41 T 11-10-2018 AYJ52_10070 45b8815a55dfeec79edfd16c6c11ba99 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AYJ52_11175 3f0a4169dd0326ac7ef96226ef585907 439 Gene3D G3DSA:1.10.300.10 102 202 1.8E-98 T 11-10-2018 AYJ52_11175 3f0a4169dd0326ac7ef96226ef585907 439 Pfam PF00709 Adenylosuccinate synthetase 5 431 1.3E-167 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AYJ52_11175 3f0a4169dd0326ac7ef96226ef585907 439 SUPERFAMILY SSF52540 3 437 5.52E-167 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_11175 3f0a4169dd0326ac7ef96226ef585907 439 Gene3D G3DSA:3.90.170.10 268 439 1.5E-61 T 11-10-2018 AYJ52_11175 3f0a4169dd0326ac7ef96226ef585907 439 Gene3D G3DSA:3.40.440.10 6 250 1.8E-98 T 11-10-2018 AYJ52_11175 3f0a4169dd0326ac7ef96226ef585907 439 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AYJ52_11175 3f0a4169dd0326ac7ef96226ef585907 439 SMART SM00788 4 432 2.8E-277 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AYJ52_11175 3f0a4169dd0326ac7ef96226ef585907 439 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 439 203.15 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AYJ52_11175 3f0a4169dd0326ac7ef96226ef585907 439 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 437 7.4E-170 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AYJ52_11175 3f0a4169dd0326ac7ef96226ef585907 439 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 Gene3D G3DSA:1.10.730.10 378 534 4.9E-35 T 11-10-2018 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 7.9E-24 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 Pfam PF09334 tRNA synthetases class I (M) 4 394 6.8E-150 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 544 39.016 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 Gene3D G3DSA:2.40.50.140 579 688 2.1E-32 T 11-10-2018 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 Pfam PF01588 Putative tRNA binding domain 593 686 7.7E-24 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 SUPERFAMILY SSF52374 3 385 9.21E-98 T 11-10-2018 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 556 687 2.8E-42 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 Pfam PF08264 Anticodon-binding domain of tRNA 425 500 5.9E-6 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 SUPERFAMILY SSF57770 138 172 3.01E-12 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 Gene3D G3DSA:3.40.50.620 4 377 7.8E-148 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 SUPERFAMILY SSF50249 586 687 3.67E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 Gene3D G3DSA:2.20.28.20 138 172 7.8E-148 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 533 1.0E-169 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AYJ52_09275 d2fbe05c00c1e26c783dffdba4a8fdc4 688 SUPERFAMILY SSF47323 388 546 1.12E-41 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 49 71 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 2.1E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 SUPERFAMILY SSF55174 327 402 6.04E-9 T 11-10-2018 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 401 1.4E-114 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 SUPERFAMILY SSF52374 8 313 1.15E-95 T 11-10-2018 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 5 402 45.769 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 Pfam PF00579 tRNA synthetases class I (W and Y) 33 314 2.6E-76 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 Gene3D G3DSA:3.40.50.620 7 220 8.3E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 Gene3D G3DSA:1.10.240.10 221 329 1.5E-30 T 11-10-2018 AYJ52_04850 d2691970e3f6feb042029d7ff94eb40e 404 Gene3D G3DSA:3.10.290.10 330 401 4.6E-7 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AYJ52_06950 6cd1062c60016800a1783a4ce8ad33c4 500 SUPERFAMILY SSF52540 9 481 8.26E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_06950 6cd1062c60016800a1783a4ce8ad33c4 500 Pfam PF13245 AAA domain 13 252 5.3E-13 T 11-10-2018 AYJ52_06950 6cd1062c60016800a1783a4ce8ad33c4 500 Pfam PF13361 UvrD-like helicase C-terminal domain 424 477 3.3E-10 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AYJ52_06950 6cd1062c60016800a1783a4ce8ad33c4 500 Gene3D G3DSA:3.40.50.300 272 487 2.6E-12 T 11-10-2018 AYJ52_16825 5cabf81e868d5c5a510bc05f47bfec4f 231 Gene3D G3DSA:1.10.3720.10 21 230 1.9E-44 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_16825 5cabf81e868d5c5a510bc05f47bfec4f 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 227 1.6E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_16825 5cabf81e868d5c5a510bc05f47bfec4f 231 SUPERFAMILY SSF161098 25 220 1.83E-42 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_17480 4c6ca168e2a926d4ff0d1ee679943712 406 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 294 3.9E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_17480 4c6ca168e2a926d4ff0d1ee679943712 406 Gene3D G3DSA:2.40.30.170 57 304 8.0E-102 T 11-10-2018 AYJ52_17480 4c6ca168e2a926d4ff0d1ee679943712 406 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 375 1.1E-87 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_17480 4c6ca168e2a926d4ff0d1ee679943712 406 Gene3D G3DSA:2.40.50.100 70 215 8.0E-102 T 11-10-2018 AYJ52_17480 4c6ca168e2a926d4ff0d1ee679943712 406 SUPERFAMILY SSF111369 59 299 4.32E-69 T 11-10-2018 AYJ52_17480 4c6ca168e2a926d4ff0d1ee679943712 406 Gene3D G3DSA:1.10.287.470 105 178 8.0E-102 T 11-10-2018 AYJ52_17480 4c6ca168e2a926d4ff0d1ee679943712 406 Gene3D G3DSA:2.40.420.20 305 373 8.0E-102 T 11-10-2018 AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 Pfam PF07676 WD40-like Beta Propeller Repeat 235 268 5.5E-8 T 11-10-2018 IPR011659 WD40-like Beta Propeller AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 Pfam PF07676 WD40-like Beta Propeller Repeat 200 223 0.0084 T 11-10-2018 IPR011659 WD40-like Beta Propeller AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 Pfam PF07676 WD40-like Beta Propeller Repeat 277 312 5.4E-11 T 11-10-2018 IPR011659 WD40-like Beta Propeller AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 Pfam PF07676 WD40-like Beta Propeller Repeat 369 393 0.0015 T 11-10-2018 IPR011659 WD40-like Beta Propeller AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 SUPERFAMILY SSF69304 149 425 1.1E-53 T 11-10-2018 AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 Gene3D G3DSA:2.120.10.30 160 426 1.1E-81 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 Pfam PF04052 TolB amino-terminal domain 30 123 2.9E-19 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 Gene3D G3DSA:3.40.50.10070 25 159 2.6E-31 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 10 423 41.618 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 21 423 4.7E-148 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AYJ52_18820 2bf231867ae08b9a154c2f163a36934e 426 SUPERFAMILY SSF52964 38 156 1.7E-26 T 11-10-2018 AYJ52_15925 35a783657c8b611c79b13fd3b464626c 257 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 210 4.9E-32 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AYJ52_15925 35a783657c8b611c79b13fd3b464626c 257 Gene3D G3DSA:3.20.20.60 4 257 1.1E-72 T 11-10-2018 AYJ52_15925 35a783657c8b611c79b13fd3b464626c 257 SUPERFAMILY SSF51621 7 255 6.98E-65 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AYJ52_12060 41438dffffe91e925ebda5c77a52143f 87 Gene3D G3DSA:2.60.200.60 17 85 3.3E-13 T 11-10-2018 AYJ52_12060 41438dffffe91e925ebda5c77a52143f 87 Pfam PF05488 PAAR motif 9 78 2.2E-22 T 11-10-2018 IPR008727 PAAR motif AYJ52_12155 5ee8dabc6e6c88d343b6a9286147275d 459 SUPERFAMILY SSF143548 17 156 4.18E-47 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AYJ52_12155 5ee8dabc6e6c88d343b6a9286147275d 459 Pfam PF03315 Serine dehydratase beta chain 4 155 3.1E-58 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AYJ52_12155 5ee8dabc6e6c88d343b6a9286147275d 459 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 455 5.6E-229 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AYJ52_12155 5ee8dabc6e6c88d343b6a9286147275d 459 Gene3D G3DSA:3.30.1330.90 11 160 5.9E-54 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AYJ52_12155 5ee8dabc6e6c88d343b6a9286147275d 459 Pfam PF03313 Serine dehydratase alpha chain 187 453 1.9E-105 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AYJ52_18725 a3a05aa2ad434366a0b1056c0da20901 228 SUPERFAMILY SSF52402 11 224 7.94E-60 T 11-10-2018 AYJ52_18725 a3a05aa2ad434366a0b1056c0da20901 228 Gene3D G3DSA:3.90.1490.10 150 228 5.6E-13 T 11-10-2018 AYJ52_18725 a3a05aa2ad434366a0b1056c0da20901 228 Pfam PF01902 Diphthamide synthase 13 224 4.0E-47 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 AYJ52_18725 a3a05aa2ad434366a0b1056c0da20901 228 Gene3D G3DSA:3.40.50.620 9 148 1.7E-25 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_18725 a3a05aa2ad434366a0b1056c0da20901 228 TIGRFAM TIGR00290 MJ0570_dom: MJ0570-related uncharacterized domain 13 225 3.3E-46 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 6.4E-23 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 SUPERFAMILY SSF56645 4 241 1.57E-82 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 5.5E-34 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 Gene3D G3DSA:1.20.140.10 235 381 1.5E-42 T 11-10-2018 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 PIRSF PIRSF016578 7 381 2.4E-15 T 11-10-2018 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 Gene3D G3DSA:1.10.540.10 2 120 5.2E-36 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 Gene3D G3DSA:2.40.110.10 121 234 9.2E-40 T 11-10-2018 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 SUPERFAMILY SSF47203 228 379 1.77E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 2.2E-38 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_17350 55361b762b7f530632dd607312f8a449 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_07350 427bbffa22d1015b7ab07f1c2ceff37d 321 SUPERFAMILY SSF53774 1 320 5.1E-61 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AYJ52_07350 427bbffa22d1015b7ab07f1c2ceff37d 321 PIRSF PIRSF500176 1 306 9.0E-39 T 11-10-2018 AYJ52_07350 427bbffa22d1015b7ab07f1c2ceff37d 321 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 1.2E-5 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AYJ52_07350 427bbffa22d1015b7ab07f1c2ceff37d 321 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 1.2E-5 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AYJ52_07350 427bbffa22d1015b7ab07f1c2ceff37d 321 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 1.2E-5 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AYJ52_07350 427bbffa22d1015b7ab07f1c2ceff37d 321 Gene3D G3DSA:3.40.50.40 209 321 8.3E-13 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AYJ52_07350 427bbffa22d1015b7ab07f1c2ceff37d 321 Pfam PF00710 Asparaginase, N-terminal 3 176 2.5E-33 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AYJ52_07350 427bbffa22d1015b7ab07f1c2ceff37d 321 SMART SM00870 3 315 1.3E-26 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AYJ52_07350 427bbffa22d1015b7ab07f1c2ceff37d 321 Gene3D G3DSA:3.40.50.1170 1 202 6.4E-36 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AYJ52_07350 427bbffa22d1015b7ab07f1c2ceff37d 321 PIRSF PIRSF001220 1 313 6.3E-34 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AYJ52_14520 3e97740a77aaa410c87282ebf1a6b14d 186 Gene3D G3DSA:1.10.357.10 6 184 6.3E-19 T 11-10-2018 AYJ52_14520 3e97740a77aaa410c87282ebf1a6b14d 186 SUPERFAMILY SSF46689 13 69 1.03E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14520 3e97740a77aaa410c87282ebf1a6b14d 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 57 6.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_14520 3e97740a77aaa410c87282ebf1a6b14d 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.8E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_14520 3e97740a77aaa410c87282ebf1a6b14d 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.8E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 Pfam PF00330 Aconitase family (aconitate hydratase) 477 827 2.9E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 SUPERFAMILY SSF52016 162 374 2.94E-64 T 11-10-2018 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 SUPERFAMILY SSF53732 381 866 3.53E-143 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 PIRSF PIRSF036687 1 868 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 ProSitePatterns PS01244 Aconitase family signature 2. 770 783 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 SUPERFAMILY SSF74778 2 160 2.75E-68 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 Gene3D G3DSA:3.30.499.10 407 534 1.9E-144 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 384 5.5E-91 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 Gene3D G3DSA:3.20.19.10 162 363 6.6E-71 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 862 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 Gene3D G3DSA:3.40.1060.10 387 689 1.9E-144 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 Gene3D G3DSA:3.30.499.10 691 874 3.6E-69 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 Gene3D G3DSA:1.25.40.310 1 161 1.8E-68 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AYJ52_16505 75fe4407248162a515504cbf502b2f59 879 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.3E-66 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AYJ52_19135 d77ffc40d50a5b325fe170037e7dfe4b 651 SUPERFAMILY SSF55718 525 647 3.3E-22 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_19135 d77ffc40d50a5b325fe170037e7dfe4b 651 Gene3D G3DSA:1.25.40.880 376 516 3.1E-55 T 11-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily AYJ52_19135 d77ffc40d50a5b325fe170037e7dfe4b 651 Pfam PF14864 Alkyl sulfatase C-terminal 525 647 1.6E-17 T 11-10-2018 IPR029229 Alkyl sulfatase, C-terminal AYJ52_19135 d77ffc40d50a5b325fe170037e7dfe4b 651 SMART SM00849 119 340 3.1E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_19135 d77ffc40d50a5b325fe170037e7dfe4b 651 Pfam PF00753 Metallo-beta-lactamase superfamily 115 326 3.8E-32 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_19135 d77ffc40d50a5b325fe170037e7dfe4b 651 Gene3D G3DSA:3.60.15.30 22 375 5.9E-146 T 11-10-2018 AYJ52_19135 d77ffc40d50a5b325fe170037e7dfe4b 651 Gene3D G3DSA:3.30.1050.10 518 649 4.6E-23 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_19135 d77ffc40d50a5b325fe170037e7dfe4b 651 SUPERFAMILY SSF56281 27 517 6.02E-140 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_19135 d77ffc40d50a5b325fe170037e7dfe4b 651 Pfam PF14863 Alkyl sulfatase dimerisation 379 514 1.2E-54 T 11-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AYJ52_18390 1cc20fef178968e66c50d010ddcfe2bf 392 Gene3D G3DSA:1.20.1250.20 193 382 1.5E-8 T 11-10-2018 AYJ52_18390 1cc20fef178968e66c50d010ddcfe2bf 392 Gene3D G3DSA:1.20.1250.20 2 191 1.3E-11 T 11-10-2018 AYJ52_18390 1cc20fef178968e66c50d010ddcfe2bf 392 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 17 375 3.5E-54 T 11-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB AYJ52_18390 1cc20fef178968e66c50d010ddcfe2bf 392 SUPERFAMILY SSF103473 9 381 3.4E-27 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_07505 2456bb98226436e6a82b964f784ccaa7 174 SUPERFAMILY SSF55068 1 163 1.27E-73 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AYJ52_07505 2456bb98226436e6a82b964f784ccaa7 174 Pfam PF01625 Peptide methionine sulfoxide reductase 3 153 4.6E-65 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AYJ52_07505 2456bb98226436e6a82b964f784ccaa7 174 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 152 8.5E-63 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AYJ52_07505 2456bb98226436e6a82b964f784ccaa7 174 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 157 37.624 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AYJ52_07505 2456bb98226436e6a82b964f784ccaa7 174 Gene3D G3DSA:3.30.1060.10 1 159 2.4E-72 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 92 650 6.0E-109 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 485 3.4E-61 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 489 507 3.4E-61 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 320 336 3.4E-61 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 553 570 3.4E-61 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 113 138 3.4E-61 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 192 210 3.4E-61 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 210 229 3.4E-61 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 351 370 3.4E-61 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 526 541 3.4E-61 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 Gene3D G3DSA:1.10.246.130 336 468 8.1E-39 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 Gene3D G3DSA:3.60.20.40 469 657 1.2E-46 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 Pfam PF01019 Gamma-glutamyltranspeptidase 106 653 1.1E-141 T 11-10-2018 AYJ52_09920 3cc19e89eeeb407e1b033b79efd53bba 661 SUPERFAMILY SSF56235 84 657 7.62E-146 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_11980 69ab1c12878ff3efb003875038e13cb0 144 SUPERFAMILY SSF55021 55 134 4.81E-17 T 11-10-2018 AYJ52_11980 69ab1c12878ff3efb003875038e13cb0 144 Gene3D G3DSA:1.10.1220.10 7 52 6.2E-7 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AYJ52_11980 69ab1c12878ff3efb003875038e13cb0 144 Gene3D G3DSA:3.30.70.1150 53 136 7.3E-20 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AYJ52_11980 69ab1c12878ff3efb003875038e13cb0 144 Pfam PF08753 NikR C terminal nickel binding domain 57 132 6.5E-19 T 11-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal AYJ52_11980 69ab1c12878ff3efb003875038e13cb0 144 SUPERFAMILY SSF47598 5 50 1.48E-6 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AYJ52_14565 941246a13f75ebfde02f0347cf4f6a47 353 Gene3D G3DSA:1.10.287.470 125 192 2.9E-13 T 11-10-2018 AYJ52_14565 941246a13f75ebfde02f0347cf4f6a47 353 Pfam PF13437 HlyD family secretion protein 224 334 2.5E-17 T 11-10-2018 AYJ52_14565 941246a13f75ebfde02f0347cf4f6a47 353 Gene3D G3DSA:1.10.287.470 91 121 3.3E-9 T 11-10-2018 AYJ52_14565 941246a13f75ebfde02f0347cf4f6a47 353 Pfam PF13533 Biotin-lipoyl like 60 101 3.1E-11 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AYJ52_14565 941246a13f75ebfde02f0347cf4f6a47 353 SUPERFAMILY SSF111369 181 298 6.54E-11 T 11-10-2018 AYJ52_14565 941246a13f75ebfde02f0347cf4f6a47 353 Gene3D G3DSA:2.40.30.170 238 353 7.7E-37 T 11-10-2018 AYJ52_14565 941246a13f75ebfde02f0347cf4f6a47 353 SUPERFAMILY SSF111369 57 185 4.32E-11 T 11-10-2018 AYJ52_14565 941246a13f75ebfde02f0347cf4f6a47 353 Gene3D G3DSA:2.40.50.100 59 90 3.3E-9 T 11-10-2018 AYJ52_08710 e5afa3f2c13f703e1c7328d2f595edc3 418 SUPERFAMILY SSF55205 1 417 3.79E-143 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AYJ52_08710 e5afa3f2c13f703e1c7328d2f595edc3 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.0E-176 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_08710 e5afa3f2c13f703e1c7328d2f595edc3 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.314 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_08710 e5afa3f2c13f703e1c7328d2f595edc3 418 Gene3D G3DSA:3.65.10.10 21 229 1.2E-174 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AYJ52_08710 e5afa3f2c13f703e1c7328d2f595edc3 418 Gene3D G3DSA:3.65.10.10 6 414 1.2E-174 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AYJ52_08710 e5afa3f2c13f703e1c7328d2f595edc3 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 5.6E-109 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AYJ52_06675 9a934600a5bec2a00caf4cb391d1cefe 290 Gene3D G3DSA:3.40.50.1820 2 290 4.8E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_06675 9a934600a5bec2a00caf4cb391d1cefe 290 Pfam PF00561 alpha/beta hydrolase fold 28 135 8.6E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_06675 9a934600a5bec2a00caf4cb391d1cefe 290 PRINTS PR00412 Epoxide hydrolase signature 33 51 9.0E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_06675 9a934600a5bec2a00caf4cb391d1cefe 290 PRINTS PR00412 Epoxide hydrolase signature 263 285 9.0E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_06675 9a934600a5bec2a00caf4cb391d1cefe 290 PRINTS PR00412 Epoxide hydrolase signature 99 112 9.0E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_06675 9a934600a5bec2a00caf4cb391d1cefe 290 PRINTS PR00412 Epoxide hydrolase signature 230 246 9.0E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_06675 9a934600a5bec2a00caf4cb391d1cefe 290 SUPERFAMILY SSF53474 4 287 5.46E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_13915 bf619a66016e00c451d128e5d3c9abfc 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AYJ52_13915 bf619a66016e00c451d128e5d3c9abfc 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 194 7.8E-74 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AYJ52_13915 bf619a66016e00c451d128e5d3c9abfc 198 SMART SM00493 79 164 1.4E-17 T 11-10-2018 IPR006171 TOPRIM domain AYJ52_13915 bf619a66016e00c451d128e5d3c9abfc 198 Gene3D G3DSA:1.10.8.420 2 51 1.2E-14 T 11-10-2018 AYJ52_13915 bf619a66016e00c451d128e5d3c9abfc 198 Gene3D G3DSA:3.40.1360.10 76 197 2.0E-44 T 11-10-2018 AYJ52_13915 bf619a66016e00c451d128e5d3c9abfc 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 95.914 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AYJ52_13915 bf619a66016e00c451d128e5d3c9abfc 198 SUPERFAMILY SSF111304 3 197 3.01E-75 T 11-10-2018 IPR023627 Recombination protein RecR AYJ52_13915 bf619a66016e00c451d128e5d3c9abfc 198 Pfam PF02132 RecR protein 41 77 2.5E-13 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AYJ52_13915 bf619a66016e00c451d128e5d3c9abfc 198 Pfam PF13662 Toprim domain 81 170 4.5E-24 T 11-10-2018 IPR006171 TOPRIM domain AYJ52_01765 7b635a699396e02108db375f2c1d1daf 216 Gene3D G3DSA:3.40.30.10 1 145 1.5E-49 T 11-10-2018 AYJ52_01765 7b635a699396e02108db375f2c1d1daf 216 PIRSF PIRSF000239 1 209 3.0E-78 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AYJ52_01765 7b635a699396e02108db375f2c1d1daf 216 Gene3D G3DSA:3.30.1020.10 146 210 4.4E-28 T 11-10-2018 AYJ52_01765 7b635a699396e02108db375f2c1d1daf 216 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 196 2.8E-13 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AYJ52_01765 7b635a699396e02108db375f2c1d1daf 216 SUPERFAMILY SSF52833 3 209 1.0E-68 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_01765 7b635a699396e02108db375f2c1d1daf 216 Pfam PF00578 AhpC/TSA family 6 135 2.6E-30 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 Gene3D G3DSA:1.10.540.10 32 137 1.1E-21 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 258 390 2.5E-23 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 25 414 3.4E-193 T 11-10-2018 IPR023922 Sulphate-starvation-induced SfnB AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 Gene3D G3DSA:2.40.110.10 140 238 7.0E-29 T 11-10-2018 AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 SUPERFAMILY SSF47203 246 414 6.6E-26 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 130 5.9E-9 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 Gene3D G3DSA:1.20.140.10 239 413 4.3E-54 T 11-10-2018 AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 PIRSF PIRSF016578 19 109 2.9E-13 T 11-10-2018 AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 PIRSF PIRSF016578 149 407 4.8E-25 T 11-10-2018 AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 231 1.3E-8 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_07175 316ae7519ada9ba6e33c70d4fc485528 415 SUPERFAMILY SSF56645 37 239 1.7E-43 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 SUPERFAMILY SSF51735 271 562 1.26E-93 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 SMART SM01274 81 261 2.1E-107 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 Gene3D G3DSA:3.40.50.10380 16 268 2.3E-114 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 SUPERFAMILY SSF53223 7 270 5.97E-110 T 11-10-2018 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 SMART SM00919 271 531 4.8E-130 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 Gene3D G3DSA:3.40.50.720 269 564 7.8E-108 T 11-10-2018 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 PIRSF PIRSF000106 4 563 8.9E-228 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 PRINTS PR00072 Malic enzyme signature 87 111 3.9E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 PRINTS PR00072 Malic enzyme signature 183 205 3.9E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 PRINTS PR00072 Malic enzyme signature 267 283 3.9E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 PRINTS PR00072 Malic enzyme signature 408 424 3.9E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 PRINTS PR00072 Malic enzyme signature 242 260 3.9E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 PRINTS PR00072 Malic enzyme signature 298 314 3.9E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 PRINTS PR00072 Malic enzyme signature 147 176 3.9E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 3.1E-100 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 2.5E-78 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AYJ52_05785 9537400b9a011e919e4a2b4ff85b0fd0 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 70.818 T 11-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 AYJ52_10360 a08e04de717063096580837f107e108d 230 Pfam PF00005 ABC transporter 25 174 4.4E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_10360 a08e04de717063096580837f107e108d 230 SUPERFAMILY SSF52540 6 226 1.19E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_10360 a08e04de717063096580837f107e108d 230 Gene3D G3DSA:3.40.50.300 4 229 9.8E-67 T 11-10-2018 AYJ52_10360 a08e04de717063096580837f107e108d 230 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_10360 a08e04de717063096580837f107e108d 230 SMART SM00382 34 223 9.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 Gene3D G3DSA:3.40.120.10 176 253 3.1E-25 T 11-10-2018 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 Gene3D G3DSA:3.40.120.10 2 144 4.0E-37 T 11-10-2018 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 10 136 6.9E-30 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 Gene3D G3DSA:3.40.120.10 256 376 9.5E-31 T 11-10-2018 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 SUPERFAMILY SSF55957 399 464 1.67E-13 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 208 221 2.7E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 2.7E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 2.7E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 2.7E-21 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 Gene3D G3DSA:3.30.310.50 379 468 1.2E-15 T 11-10-2018 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 371 1.4E-17 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 SUPERFAMILY SSF53738 7 180 1.26E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 SUPERFAMILY SSF53738 263 369 5.1E-22 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 SUPERFAMILY SSF53738 159 258 5.89E-27 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_09805 82e35566a539f7a15a9a995ee45d3b7b 472 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 256 1.4E-25 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_15930 c92603bcef0f13a3eadaee562655abcd 749 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 87 731 3.9E-74 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_15930 c92603bcef0f13a3eadaee562655abcd 749 SUPERFAMILY SSF56935 56 749 8.42E-89 T 11-10-2018 AYJ52_15930 c92603bcef0f13a3eadaee562655abcd 749 Gene3D G3DSA:2.40.170.20 195 748 1.3E-58 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_15930 c92603bcef0f13a3eadaee562655abcd 749 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 171 2.2E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_15930 c92603bcef0f13a3eadaee562655abcd 749 Pfam PF00593 TonB dependent receptor 265 724 1.7E-38 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_15930 c92603bcef0f13a3eadaee562655abcd 749 Gene3D G3DSA:2.170.130.10 45 176 1.3E-16 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_01360 ec3baeb496143043a505b831c6890bc7 235 Gene3D G3DSA:3.40.109.10 2 230 1.2E-65 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_01360 ec3baeb496143043a505b831c6890bc7 235 Pfam PF00881 Nitroreductase family 13 209 1.7E-35 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AYJ52_01360 ec3baeb496143043a505b831c6890bc7 235 SUPERFAMILY SSF55469 9 232 1.01E-46 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_07720 61865af645854fd6cbce3f796cf72038 411 SMART SM00729 135 360 0.009 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AYJ52_07720 61865af645854fd6cbce3f796cf72038 411 Gene3D G3DSA:3.20.20.70 92 373 1.6E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_07720 61865af645854fd6cbce3f796cf72038 411 SUPERFAMILY SSF102114 136 356 7.98E-17 T 11-10-2018 AYJ52_07720 61865af645854fd6cbce3f796cf72038 411 Pfam PF04055 Radical SAM superfamily 140 313 5.4E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_07720 61865af645854fd6cbce3f796cf72038 411 PIRSF PIRSF006004 23 402 6.8E-148 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 AYJ52_07720 61865af645854fd6cbce3f796cf72038 411 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 27 393 2.6E-144 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AYJ52_07720 61865af645854fd6cbce3f796cf72038 411 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 30 388 76.483 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AYJ52_07720 61865af645854fd6cbce3f796cf72038 411 Gene3D G3DSA:1.10.150.530 9 91 4.5E-26 T 11-10-2018 AYJ52_04375 d8cd84ec9f7aef5e90ed0b8d9aa201e0 398 Pfam PF03583 Secretory lipase 134 352 1.0E-14 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AYJ52_04375 d8cd84ec9f7aef5e90ed0b8d9aa201e0 398 Gene3D G3DSA:3.40.50.1820 303 398 7.7E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04375 d8cd84ec9f7aef5e90ed0b8d9aa201e0 398 Gene3D G3DSA:3.40.50.1820 27 275 3.3E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04375 d8cd84ec9f7aef5e90ed0b8d9aa201e0 398 SUPERFAMILY SSF53474 80 387 8.57E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04375 d8cd84ec9f7aef5e90ed0b8d9aa201e0 398 PIRSF PIRSF029171 7 394 5.7E-84 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AYJ52_04195 0ff773a3f29255cab22872dad2438fbf 397 SUPERFAMILY SSF55073 236 389 9.42E-47 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_04195 0ff773a3f29255cab22872dad2438fbf 397 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 384 2.2E-46 T 11-10-2018 IPR000160 GGDEF domain AYJ52_04195 0ff773a3f29255cab22872dad2438fbf 397 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 387 3.6E-46 T 11-10-2018 IPR000160 GGDEF domain AYJ52_04195 0ff773a3f29255cab22872dad2438fbf 397 SMART SM00267 220 388 1.8E-57 T 11-10-2018 IPR000160 GGDEF domain AYJ52_04195 0ff773a3f29255cab22872dad2438fbf 397 Gene3D G3DSA:3.30.70.270 217 391 1.0E-53 T 11-10-2018 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 PRINTS PR00045 Sigma-54 factor signature 381 393 9.9E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 PRINTS PR00045 Sigma-54 factor signature 455 473 9.9E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 PRINTS PR00045 Sigma-54 factor signature 397 408 9.9E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 PRINTS PR00045 Sigma-54 factor signature 192 209 9.9E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 Gene3D G3DSA:1.10.10.60 422 480 9.6E-25 T 11-10-2018 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 Pfam PF04552 Sigma-54, DNA binding domain 323 479 1.6E-68 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 460 467 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 Pfam PF04963 Sigma-54 factor, core binding domain 111 308 3.9E-52 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 Gene3D G3DSA:1.10.10.1330 115 252 3.7E-20 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 48 6.8E-14 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 PIRSF PIRSF000774 1 481 3.2E-140 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 369 388 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AYJ52_08695 b4a8ac6c3a0e94fb4afac453b2708a0d 482 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 479 8.2E-150 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AYJ52_15910 15ab3132febe162c478d7d5ac2108a92 564 Pfam PF06276 Ferric iron reductase FhuF-like transporter 386 530 4.3E-12 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain AYJ52_15910 15ab3132febe162c478d7d5ac2108a92 564 Pfam PF04183 IucA / IucC family 132 351 1.5E-20 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AYJ52_15910 15ab3132febe162c478d7d5ac2108a92 564 Gene3D G3DSA:1.10.510.40 355 543 4.3E-11 T 11-10-2018 AYJ52_04600 da865bb866a40c647bea5f475d3f7188 259 Pfam PF01614 Bacterial transcriptional regulator 128 220 7.9E-8 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AYJ52_04600 da865bb866a40c647bea5f475d3f7188 259 Pfam PF09339 IclR helix-turn-helix domain 12 61 3.0E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_04600 da865bb866a40c647bea5f475d3f7188 259 SUPERFAMILY SSF55781 74 256 6.02E-24 T 11-10-2018 AYJ52_04600 da865bb866a40c647bea5f475d3f7188 259 SUPERFAMILY SSF46785 10 81 9.29E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_04600 da865bb866a40c647bea5f475d3f7188 259 Gene3D G3DSA:3.30.450.40 83 257 1.2E-20 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_04600 da865bb866a40c647bea5f475d3f7188 259 SMART SM00346 10 99 3.6E-9 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_04600 da865bb866a40c647bea5f475d3f7188 259 Gene3D G3DSA:1.10.10.10 9 82 1.9E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_01005 3188d8e0908f8772b771213d23a3e683 444 Gene3D G3DSA:3.30.565.10 282 435 7.4E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_01005 3188d8e0908f8772b771213d23a3e683 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 219 278 2.2E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_01005 3188d8e0908f8772b771213d23a3e683 444 SUPERFAMILY SSF55874 271 435 2.49E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_01005 3188d8e0908f8772b771213d23a3e683 444 Gene3D G3DSA:1.10.287.130 169 280 5.2E-19 T 11-10-2018 AYJ52_01005 3188d8e0908f8772b771213d23a3e683 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 5.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_01005 3188d8e0908f8772b771213d23a3e683 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 5.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_01005 3188d8e0908f8772b771213d23a3e683 444 SUPERFAMILY SSF47384 202 278 1.18E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_01005 3188d8e0908f8772b771213d23a3e683 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 434 3.5E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_01005 3188d8e0908f8772b771213d23a3e683 444 SMART SM00387 326 437 4.0E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_01005 3188d8e0908f8772b771213d23a3e683 444 SMART SM00388 218 280 1.6E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_16970 f8d8f369f86fe102ebd355435dfcb692 323 Pfam PF00487 Fatty acid desaturase 56 278 5.4E-18 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AYJ52_16970 f8d8f369f86fe102ebd355435dfcb692 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 211 232 1.4E-27 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AYJ52_16970 f8d8f369f86fe102ebd355435dfcb692 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 116 145 1.4E-27 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AYJ52_16970 f8d8f369f86fe102ebd355435dfcb692 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 254 268 1.4E-27 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AYJ52_16970 f8d8f369f86fe102ebd355435dfcb692 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 79 99 1.4E-27 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AYJ52_16970 f8d8f369f86fe102ebd355435dfcb692 323 PRINTS PR00075 Fatty acid desaturase family 1 signature 34 54 1.4E-27 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AYJ52_03720 798e371a8006539022e8f2022717a411 414 Pfam PF07690 Major Facilitator Superfamily 37 259 2.7E-27 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_03720 798e371a8006539022e8f2022717a411 414 Pfam PF07690 Major Facilitator Superfamily 267 408 3.0E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_03720 798e371a8006539022e8f2022717a411 414 Gene3D G3DSA:1.20.1250.20 27 412 2.5E-49 T 11-10-2018 AYJ52_03720 798e371a8006539022e8f2022717a411 414 SUPERFAMILY SSF103473 24 409 6.67E-56 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_11545 967a717fc4323f39e271aa9d619c6677 337 Gene3D G3DSA:2.40.110.10 96 188 2.0E-7 T 11-10-2018 AYJ52_11545 967a717fc4323f39e271aa9d619c6677 337 SUPERFAMILY SSF56645 52 182 2.82E-7 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_17880 88f2e0c64b970fc068953902e8a2b0b2 315 Gene3D G3DSA:1.10.3470.10 2 314 1.6E-39 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AYJ52_17880 88f2e0c64b970fc068953902e8a2b0b2 315 Pfam PF01032 FecCD transport family 27 310 2.7E-36 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AYJ52_17880 88f2e0c64b970fc068953902e8a2b0b2 315 SUPERFAMILY SSF81345 4 310 7.59E-43 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AYJ52_18235 473f6c96c6d061e7d56b3ec55c4a4fe4 320 Pfam PF01343 Peptidase family S49 119 259 8.1E-42 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AYJ52_18235 473f6c96c6d061e7d56b3ec55c4a4fe4 320 Gene3D G3DSA:3.40.1750.20 159 223 2.6E-41 T 11-10-2018 AYJ52_18235 473f6c96c6d061e7d56b3ec55c4a4fe4 320 SUPERFAMILY SSF52096 55 256 1.57E-26 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_18235 473f6c96c6d061e7d56b3ec55c4a4fe4 320 Gene3D G3DSA:3.90.226.10 61 258 2.6E-41 T 11-10-2018 AYJ52_18235 473f6c96c6d061e7d56b3ec55c4a4fe4 320 Pfam PF08496 Peptidase family S49 N-terminal 10 115 1.0E-31 T 11-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 SUPERFAMILY SSF52540 68 590 2.31E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 689 795 1.1E-10 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 SUPERFAMILY SSF54211 603 795 2.2E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 Gene3D G3DSA:3.40.50.300 281 488 9.4E-55 T 11-10-2018 AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 Gene3D G3DSA:3.40.50.300 45 231 5.3E-29 T 11-10-2018 AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 Pfam PF13654 AAA domain 64 579 5.2E-171 T 11-10-2018 AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 Gene3D G3DSA:3.30.230.10 582 822 3.6E-90 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 Gene3D G3DSA:1.10.8.60 489 576 3.4E-14 T 11-10-2018 AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 100 119 1.1E-10 T 11-10-2018 AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 716 735 1.1E-10 T 11-10-2018 AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 686 705 1.1E-10 T 11-10-2018 AYJ52_18165 3ba056e042bf0809c6f1533e32ba4216 872 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 746 764 1.1E-10 T 11-10-2018 AYJ52_01235 9223ad98550afc7a31168c738e412d99 205 Gene3D G3DSA:3.40.50.1000 3 191 1.9E-78 T 11-10-2018 IPR023214 HAD superfamily AYJ52_01235 9223ad98550afc7a31168c738e412d99 205 Pfam PF00702 haloacid dehalogenase-like hydrolase 65 164 1.1E-9 T 11-10-2018 AYJ52_01235 9223ad98550afc7a31168c738e412d99 205 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 160 5.6E-13 T 11-10-2018 AYJ52_01235 9223ad98550afc7a31168c738e412d99 205 Gene3D G3DSA:3.90.1470.10 13 128 1.9E-78 T 11-10-2018 AYJ52_01235 9223ad98550afc7a31168c738e412d99 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1 202 1.8E-96 T 11-10-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 AYJ52_01235 9223ad98550afc7a31168c738e412d99 205 SUPERFAMILY SSF56784 1 196 1.71E-43 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 Gene3D G3DSA:3.40.50.920 540 661 1.2E-35 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 SUPERFAMILY SSF52518 337 527 2.9E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 661 1.1E-296 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 SMART SM00861 357 527 1.6E-71 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 SUPERFAMILY SSF52922 534 661 2.71E-36 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 SUPERFAMILY SSF52518 7 322 1.04E-119 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 Gene3D G3DSA:3.40.50.970 329 539 3.8E-85 T 11-10-2018 AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 Pfam PF02780 Transketolase, C-terminal domain 551 653 1.4E-9 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 ProSitePatterns PS00802 Transketolase signature 2. 469 485 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 Pfam PF02779 Transketolase, pyrimidine binding domain 356 526 2.2E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 336 1.7E-164 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AYJ52_13260 e6561c17d1b88883ab57390c985dc179 662 Gene3D G3DSA:3.40.50.970 6 328 4.8E-131 T 11-10-2018 AYJ52_00770 ca61040013eaeae5f106ba11d1b7c29e 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 123 1.1E-23 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00770 ca61040013eaeae5f106ba11d1b7c29e 130 Gene3D G3DSA:1.20.1300.10 1 129 8.8E-32 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00770 ca61040013eaeae5f106ba11d1b7c29e 130 SUPERFAMILY SSF81343 22 128 1.34E-23 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00770 ca61040013eaeae5f106ba11d1b7c29e 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 20 127 2.3E-30 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_00770 ca61040013eaeae5f106ba11d1b7c29e 130 PIRSF PIRSF000178 1 129 4.1E-21 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_09165 6854084e3e500b09be2e77389b143f3b 338 Pfam PF00146 NADH dehydrogenase 24 329 7.0E-121 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09165 6854084e3e500b09be2e77389b143f3b 338 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 218 231 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09165 6854084e3e500b09be2e77389b143f3b 338 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 63 78 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09165 6854084e3e500b09be2e77389b143f3b 338 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 17 336 24.199 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_18105 3e60eb29f32b1e9f87494c898e091d54 404 SUPERFAMILY SSF56349 108 387 1.18E-44 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AYJ52_18105 3e60eb29f32b1e9f87494c898e091d54 404 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 109 152 1.0E-7 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AYJ52_18105 3e60eb29f32b1e9f87494c898e091d54 404 Gene3D G3DSA:1.10.150.130 98 210 6.8E-17 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AYJ52_18105 3e60eb29f32b1e9f87494c898e091d54 404 Gene3D G3DSA:1.10.443.10 211 376 7.0E-13 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AYJ52_18105 3e60eb29f32b1e9f87494c898e091d54 404 Pfam PF13356 Arm DNA-binding domain 11 88 2.9E-11 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AYJ52_18105 3e60eb29f32b1e9f87494c898e091d54 404 Gene3D G3DSA:3.30.160.390 10 97 4.4E-18 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AYJ52_18105 3e60eb29f32b1e9f87494c898e091d54 404 Pfam PF00589 Phage integrase family 215 366 9.1E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 Pfam PF00857 Isochorismatase family 32 205 9.3E-31 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 SUPERFAMILY SSF47336 216 284 6.67E-9 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 Gene3D G3DSA:3.40.50.850 1 209 2.7E-73 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 PIRSF PIRSF001111 1 288 5.9E-132 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 Pfam PF00550 Phosphopantetheine attachment site 222 276 2.5E-7 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 PRINTS PR01398 Isochorismatase signature 113 135 1.0E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 PRINTS PR01398 Isochorismatase signature 63 80 1.0E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 PRINTS PR01398 Isochorismatase signature 187 204 1.0E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 PRINTS PR01398 Isochorismatase signature 2 14 1.0E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 PRINTS PR01398 Isochorismatase signature 80 99 1.0E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 PRINTS PR01398 Isochorismatase signature 169 187 1.0E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 Gene3D G3DSA:1.10.1200.10 215 285 1.4E-18 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_17845 9ae6444348c26b1819e24ee2e8afe929 289 SUPERFAMILY SSF52499 1 227 2.88E-60 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_13370 4e3e7cba7264f474d26ba005c45bfd1e 197 Gene3D G3DSA:3.90.950.10 4 196 4.0E-49 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AYJ52_13370 4e3e7cba7264f474d26ba005c45bfd1e 197 SUPERFAMILY SSF52972 3 191 7.85E-49 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AYJ52_13370 4e3e7cba7264f474d26ba005c45bfd1e 197 Pfam PF02545 Maf-like protein 5 191 7.8E-38 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AYJ52_13370 4e3e7cba7264f474d26ba005c45bfd1e 197 PIRSF PIRSF006305 1 196 3.4E-38 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AYJ52_13370 4e3e7cba7264f474d26ba005c45bfd1e 197 Hamap MF_00528 Septum formation protein Maf [maf]. 5 196 22.262 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AYJ52_13370 4e3e7cba7264f474d26ba005c45bfd1e 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 190 2.3E-40 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AYJ52_02685 a4683107e3aac46c2da547576ec2b6f7 200 Gene3D G3DSA:3.40.1370.10 3 199 1.8E-65 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_02685 a4683107e3aac46c2da547576ec2b6f7 200 SUPERFAMILY SSF52166 7 196 8.76E-69 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_02685 a4683107e3aac46c2da547576ec2b6f7 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 2 200 32.687 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02685 a4683107e3aac46c2da547576ec2b6f7 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 196 1.5E-61 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AYJ52_02685 a4683107e3aac46c2da547576ec2b6f7 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 196 8.7E-72 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02600 3b333c13958803624e6c355814fc04a5 58 SUPERFAMILY SSF55129 1 58 7.72E-19 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AYJ52_02600 3b333c13958803624e6c355814fc04a5 58 Gene3D G3DSA:3.30.1390.20 1 58 6.2E-22 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AYJ52_02600 3b333c13958803624e6c355814fc04a5 58 PIRSF PIRSF002211 1 58 1.8E-23 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02600 3b333c13958803624e6c355814fc04a5 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 18.362 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02600 3b333c13958803624e6c355814fc04a5 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 6.6E-16 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AYJ52_02600 3b333c13958803624e6c355814fc04a5 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.1E-18 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 Gene3D G3DSA:2.40.10.120 58 277 5.3E-77 T 11-10-2018 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 Pfam PF13180 PDZ domain 284 373 6.7E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 SUPERFAMILY SSF50494 58 281 7.72E-62 T 11-10-2018 IPR009003 Peptidase S1, PA clan AYJ52_17665 4ab561c2fda295a25296b11942514505 391 SMART SM00228 284 364 1.2E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 Pfam PF13365 Trypsin-like peptidase domain 112 245 5.1E-32 T 11-10-2018 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 2.0E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 2.0E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 PRINTS PR00834 HtrA/DegQ protease family signature 142 162 2.0E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 PRINTS PR00834 HtrA/DegQ protease family signature 181 205 2.0E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 PRINTS PR00834 HtrA/DegQ protease family signature 121 133 2.0E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 PRINTS PR00834 HtrA/DegQ protease family signature 322 334 2.0E-54 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 Gene3D G3DSA:2.30.42.10 279 385 3.1E-23 T 11-10-2018 AYJ52_17665 4ab561c2fda295a25296b11942514505 391 SUPERFAMILY SSF50156 269 372 2.76E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 Gene3D G3DSA:2.40.37.10 16 407 9.3E-147 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 6.5E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 56 74 6.5E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 76 88 6.5E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 189 202 6.5E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 6.5E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 56 74 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 SUPERFAMILY SSF50621 255 412 1.03E-50 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 SUPERFAMILY SSF51419 25 281 2.75E-80 T 11-10-2018 IPR029066 PLP-binding barrel AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 279 1.2E-72 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 297 315 6.4E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 74 91 6.4E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 6.4E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 163 172 6.4E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 Gene3D G3DSA:3.20.20.10 33 274 9.3E-147 T 11-10-2018 IPR029066 PLP-binding barrel AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 410 2.1E-160 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 368 3.8E-22 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 411 40.5 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AYJ52_00190 6ff659842fda3edbd393ce14c2733295 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 240 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AYJ52_01710 a0ac19b8221e6122661952be98b530d7 336 SMART SM00342 248 330 3.7E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_01710 a0ac19b8221e6122661952be98b530d7 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 1.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_01710 a0ac19b8221e6122661952be98b530d7 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 1.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_01710 a0ac19b8221e6122661952be98b530d7 336 Pfam PF12833 Helix-turn-helix domain 255 331 2.2E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_01710 a0ac19b8221e6122661952be98b530d7 336 SUPERFAMILY SSF46689 283 331 2.96E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_01710 a0ac19b8221e6122661952be98b530d7 336 Gene3D G3DSA:1.10.10.60 227 334 1.0E-25 T 11-10-2018 AYJ52_01710 a0ac19b8221e6122661952be98b530d7 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 1.3E-48 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_11495 307ffbe99b5e880f2ca1249ff3dc80bd 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 35 - T 11-10-2018 IPR019844 Cold-shock conserved site AYJ52_11495 307ffbe99b5e880f2ca1249ff3dc80bd 71 SMART SM00357 5 68 9.0E-30 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AYJ52_11495 307ffbe99b5e880f2ca1249ff3dc80bd 71 PRINTS PR00050 Cold shock protein signature 6 21 6.0E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_11495 307ffbe99b5e880f2ca1249ff3dc80bd 71 PRINTS PR00050 Cold shock protein signature 41 59 6.0E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_11495 307ffbe99b5e880f2ca1249ff3dc80bd 71 PRINTS PR00050 Cold shock protein signature 26 35 6.0E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_11495 307ffbe99b5e880f2ca1249ff3dc80bd 71 Gene3D G3DSA:2.40.50.140 4 66 4.7E-28 T 11-10-2018 AYJ52_11495 307ffbe99b5e880f2ca1249ff3dc80bd 71 PIRSF PIRSF002599 1 71 2.8E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AYJ52_11495 307ffbe99b5e880f2ca1249ff3dc80bd 71 SUPERFAMILY SSF50249 4 68 9.6E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_11495 307ffbe99b5e880f2ca1249ff3dc80bd 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 66 3.6E-27 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_07990 acf2caff40e79ba164a61ad979e93ad8 892 Pfam PF01345 Domain of unknown function DUF11 810 891 4.0E-6 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_07990 acf2caff40e79ba164a61ad979e93ad8 892 Pfam PF01345 Domain of unknown function DUF11 206 322 1.3E-7 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_07990 acf2caff40e79ba164a61ad979e93ad8 892 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 208 257 1.0E-5 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_07990 acf2caff40e79ba164a61ad979e93ad8 892 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 814 845 5.6E-6 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_13770 56edb9f33c08ba187e32a5416215f8f1 457 SUPERFAMILY SSF56112 103 318 1.01E-10 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_13770 56edb9f33c08ba187e32a5416215f8f1 457 Pfam PF03109 ABC1 family 128 232 6.1E-26 T 11-10-2018 IPR004147 UbiB domain AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 6.5E-24 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 PIRSF PIRSF016578 2 379 7.2E-19 T 11-10-2018 AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 SUPERFAMILY SSF47203 226 378 4.51E-48 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.4E-30 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 Gene3D G3DSA:1.10.540.10 3 119 8.0E-33 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 SUPERFAMILY SSF56645 4 240 1.31E-79 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 6.0E-40 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 Gene3D G3DSA:1.20.140.10 234 379 1.5E-42 T 11-10-2018 AYJ52_10985 c31cd147399b9c8194bd2145f2f45569 379 Gene3D G3DSA:2.40.110.10 120 233 6.1E-40 T 11-10-2018 AYJ52_07390 629d2124abc2cbb99f2034461804f53d 210 PIRSF PIRSF006324 1 209 1.7E-45 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_07390 629d2124abc2cbb99f2034461804f53d 210 Pfam PF01810 LysE type translocator 16 207 1.2E-27 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_06130 48d57f85a15a24cb37fb15c563ad991e 477 SUPERFAMILY SSF46785 15 85 3.66E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_06130 48d57f85a15a24cb37fb15c563ad991e 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 82 1.1E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_06130 48d57f85a15a24cb37fb15c563ad991e 477 Gene3D G3DSA:3.40.640.10 99 464 1.3E-100 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_06130 48d57f85a15a24cb37fb15c563ad991e 477 SMART SM00345 23 82 2.4E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_06130 48d57f85a15a24cb37fb15c563ad991e 477 Gene3D G3DSA:1.10.10.10 6 83 4.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_06130 48d57f85a15a24cb37fb15c563ad991e 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 1.8E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_06130 48d57f85a15a24cb37fb15c563ad991e 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 1.8E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_06130 48d57f85a15a24cb37fb15c563ad991e 477 Pfam PF00155 Aminotransferase class I and II 136 466 1.4E-24 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_06130 48d57f85a15a24cb37fb15c563ad991e 477 SUPERFAMILY SSF53383 76 472 4.69E-78 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 Gene3D G3DSA:2.40.110.10 119 231 1.8E-41 T 11-10-2018 AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 Gene3D G3DSA:1.20.140.10 232 375 8.9E-58 T 11-10-2018 AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 SUPERFAMILY SSF56645 2 240 2.36E-82 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 PIRSF PIRSF016578 234 371 2.5E-13 T 11-10-2018 AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 PIRSF PIRSF016578 1 215 1.7E-11 T 11-10-2018 AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 SUPERFAMILY SSF47203 225 375 2.74E-59 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 6.5E-35 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 1.1E-51 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 2.6E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_05615 dbd0f8d2316bc1f11a13d2ee5f128660 375 Gene3D G3DSA:1.10.540.10 1 118 2.2E-42 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_12655 86c3513c8c917b6b628bc8dea70bf9b0 301 SUPERFAMILY SSF53850 95 298 5.43E-39 T 11-10-2018 AYJ52_12655 86c3513c8c917b6b628bc8dea70bf9b0 301 Gene3D G3DSA:3.40.190.290 95 300 2.7E-46 T 11-10-2018 AYJ52_12655 86c3513c8c917b6b628bc8dea70bf9b0 301 Gene3D G3DSA:1.10.10.10 1 84 1.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12655 86c3513c8c917b6b628bc8dea70bf9b0 301 SUPERFAMILY SSF46785 3 91 3.16E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12655 86c3513c8c917b6b628bc8dea70bf9b0 301 Pfam PF03466 LysR substrate binding domain 92 296 3.2E-44 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12655 86c3513c8c917b6b628bc8dea70bf9b0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 67 2.8E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12655 86c3513c8c917b6b628bc8dea70bf9b0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12655 86c3513c8c917b6b628bc8dea70bf9b0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12655 86c3513c8c917b6b628bc8dea70bf9b0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 SUPERFAMILY SSF82693 582 679 8.89E-6 T 11-10-2018 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 SUPERFAMILY SSF82714 206 288 3.79E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 SUPERFAMILY SSF82866 312 519 3.27E-35 T 11-10-2018 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 Gene3D G3DSA:3.30.70.1440 689 884 2.9E-286 T 11-10-2018 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 Gene3D G3DSA:3.30.2090.10 202 293 2.9E-286 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 SUPERFAMILY SSF82693 168 346 9.07E-21 T 11-10-2018 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 15 1048 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 Gene3D G3DSA:1.20.1640.10 27 528 2.9E-286 T 11-10-2018 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 Gene3D G3DSA:3.30.2090.10 740 827 2.9E-286 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 SUPERFAMILY SSF82866 823 1043 1.83E-50 T 11-10-2018 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 Gene3D G3DSA:3.30.70.1430 55 835 2.9E-286 T 11-10-2018 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 Pfam PF00873 AcrB/AcrD/AcrF family 18 1040 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 SUPERFAMILY SSF82714 739 821 1.31E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 SUPERFAMILY SSF82693 55 141 6.02E-22 T 11-10-2018 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 Gene3D G3DSA:3.30.70.1430 583 688 2.9E-286 T 11-10-2018 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 1.6E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 1.6E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 1.6E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 PRINTS PR00702 Acriflavin resistance protein family signature 566 583 1.6E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 PRINTS PR00702 Acriflavin resistance protein family signature 493 516 1.6E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 PRINTS PR00702 Acriflavin resistance protein family signature 379 400 1.6E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 Gene3D G3DSA:3.30.70.1320 148 346 2.9E-286 T 11-10-2018 AYJ52_03375 2765aeb08f5951cbf21586dcaafc0c18 1052 Gene3D G3DSA:1.20.1640.10 529 1038 2.9E-286 T 11-10-2018 AYJ52_15620 e28077bb7128bdf1c22a5b3ec92c39f3 228 Gene3D G3DSA:3.40.50.1000 2 196 8.8E-26 T 11-10-2018 IPR023214 HAD superfamily AYJ52_15620 e28077bb7128bdf1c22a5b3ec92c39f3 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 181 8.7E-20 T 11-10-2018 AYJ52_15620 e28077bb7128bdf1c22a5b3ec92c39f3 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 180 1.5E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_15620 e28077bb7128bdf1c22a5b3ec92c39f3 228 SUPERFAMILY SSF56784 3 182 4.33E-33 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_15620 e28077bb7128bdf1c22a5b3ec92c39f3 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 7.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_15620 e28077bb7128bdf1c22a5b3ec92c39f3 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 7.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_15620 e28077bb7128bdf1c22a5b3ec92c39f3 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 7.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_15620 e28077bb7128bdf1c22a5b3ec92c39f3 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 7.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 Gene3D G3DSA:3.30.420.10 326 540 3.4E-68 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 Gene3D G3DSA:1.10.150.20 706 849 2.1E-109 T 11-10-2018 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 SUPERFAMILY SSF56672 524 923 1.78E-148 T 11-10-2018 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 SMART SM00475 1 256 1.4E-120 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 259 1.1E-30 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 SUPERFAMILY SSF47807 166 280 5.38E-34 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 Pfam PF00476 DNA polymerase family A 551 921 2.8E-150 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 TIGRFAM TIGR00593 pola: DNA polymerase I 5 923 1.5E-291 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 Gene3D G3DSA:1.10.150.20 169 241 6.4E-95 T 11-10-2018 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 Gene3D G3DSA:3.40.50.1010 5 272 6.4E-95 T 11-10-2018 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 SUPERFAMILY SSF88723 1 165 2.94E-53 T 11-10-2018 IPR029060 PIN-like domain superfamily AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 SMART SM00279 168 203 7.0E-13 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 SMART SM00482 683 887 5.7E-101 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 SUPERFAMILY SSF53098 332 516 4.4E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 Gene3D G3DSA:1.20.1060.10 542 655 9.6E-38 T 11-10-2018 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 Pfam PF01612 3'-5' exonuclease 329 515 5.4E-37 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 SMART SM00474 329 516 1.0E-35 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 Gene3D G3DSA:3.30.70.370 661 919 2.1E-109 T 11-10-2018 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 842 858 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 727 740 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 652 674 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 675 690 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 870 883 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 697 720 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 810 821 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 788 799 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 PRINTS PR00868 DNA-polymerase family A (pol I) signature 751 776 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 ProSitePatterns PS00447 DNA polymerase family A signature. 751 770 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_08610 0f5260f82f0a9cd4799b9887911d7938 923 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 3.7E-51 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AYJ52_17240 7756652acbbaf7859573947f606cad57 383 Gene3D G3DSA:3.40.50.300 1 217 2.3E-72 T 11-10-2018 AYJ52_17240 7756652acbbaf7859573947f606cad57 383 Gene3D G3DSA:3.40.50.300 220 377 3.4E-51 T 11-10-2018 AYJ52_17240 7756652acbbaf7859573947f606cad57 383 SMART SM00490 265 346 1.2E-29 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_17240 7756652acbbaf7859573947f606cad57 383 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AYJ52_17240 7756652acbbaf7859573947f606cad57 383 SUPERFAMILY SSF52540 78 365 9.46E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17240 7756652acbbaf7859573947f606cad57 383 SMART SM00487 22 229 2.0E-55 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ52_17240 7756652acbbaf7859573947f606cad57 383 Pfam PF00271 Helicase conserved C-terminal domain 237 346 5.4E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_17240 7756652acbbaf7859573947f606cad57 383 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 2 382 49.49 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AYJ52_17240 7756652acbbaf7859573947f606cad57 383 Pfam PF00270 DEAD/DEAH box helicase 27 200 7.2E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AYJ52_09030 214764e7d3f9cd88d32471928926e858 713 Gene3D G3DSA:1.20.1560.10 145 456 6.0E-62 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_09030 214764e7d3f9cd88d32471928926e858 713 SUPERFAMILY SSF90123 141 456 2.88E-62 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_09030 214764e7d3f9cd88d32471928926e858 713 Gene3D G3DSA:3.40.50.300 465 712 5.6E-70 T 11-10-2018 AYJ52_09030 214764e7d3f9cd88d32471928926e858 713 ProSitePatterns PS00211 ABC transporters family signature. 612 626 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_09030 214764e7d3f9cd88d32471928926e858 713 SMART SM00382 500 686 4.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_09030 214764e7d3f9cd88d32471928926e858 713 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 8 703 7.5E-261 T 11-10-2018 IPR017750 ATPase, type I secretion system AYJ52_09030 214764e7d3f9cd88d32471928926e858 713 SUPERFAMILY SSF52540 464 701 2.25E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09030 214764e7d3f9cd88d32471928926e858 713 Pfam PF00005 ABC transporter 495 640 2.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_09030 214764e7d3f9cd88d32471928926e858 713 Gene3D G3DSA:3.90.70.10 4 127 5.3E-12 T 11-10-2018 AYJ52_09030 214764e7d3f9cd88d32471928926e858 713 Pfam PF00664 ABC transporter transmembrane region 161 424 5.1E-31 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AYJ52_16320 1300c3db56d0c5203bd97bdbbb431cd3 176 SMART SM00972 116 173 1.8E-18 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_16320 1300c3db56d0c5203bd97bdbbb431cd3 176 Pfam PF05229 Spore Coat Protein U domain 27 173 6.7E-28 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 Gene3D G3DSA:3.30.310.50 372 456 4.1E-26 T 11-10-2018 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 SUPERFAMILY SSF53738 261 366 3.22E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 SUPERFAMILY SSF55957 370 455 3.49E-19 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 439 1.0E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 2.3E-34 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 7.6E-29 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 7.6E-29 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 7.6E-29 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 7.6E-29 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 371 2.5E-22 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 SUPERFAMILY SSF53738 152 259 2.94E-25 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 Gene3D G3DSA:3.40.120.10 170 252 1.7E-28 T 11-10-2018 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 SUPERFAMILY SSF53738 4 175 4.41E-39 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 Gene3D G3DSA:3.40.120.10 253 371 4.0E-31 T 11-10-2018 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 256 1.9E-20 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AYJ52_05375 662f7febc5ea083c565867bb677a61ec 456 Gene3D G3DSA:3.40.120.10 2 148 1.2E-52 T 11-10-2018 AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 Pfam PF02780 Transketolase, C-terminal domain 500 619 2.5E-28 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 SUPERFAMILY SSF52518 315 499 1.94E-59 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 Gene3D G3DSA:3.40.50.920 501 631 2.6E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 16 284 5.4E-105 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 15 628 42.032 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 Pfam PF02779 Transketolase, pyrimidine binding domain 316 475 1.8E-39 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 SUPERFAMILY SSF52518 12 378 6.79E-75 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 Gene3D G3DSA:3.40.50.970 315 487 4.1E-68 T 11-10-2018 AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 SUPERFAMILY SSF52922 489 625 3.01E-31 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 18 624 6.4E-239 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AYJ52_02825 59a19983cfba4a923686489ca32f7e25 634 SMART SM00861 316 480 7.0E-69 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ52_16425 2bb71149aa90ca3921c51e3936005f29 170 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AYJ52_16425 2bb71149aa90ca3921c51e3936005f29 170 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.6 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AYJ52_16425 2bb71149aa90ca3921c51e3936005f29 170 Pfam PF17209 Hfq protein 7 68 9.1E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AYJ52_16425 2bb71149aa90ca3921c51e3936005f29 170 SUPERFAMILY SSF50182 7 67 3.07E-23 T 11-10-2018 IPR010920 LSM domain superfamily AYJ52_16425 2bb71149aa90ca3921c51e3936005f29 170 Gene3D G3DSA:2.30.30.100 1 69 1.4E-31 T 11-10-2018 AYJ52_09655 59fd50a457736c15100dd4921e4748ae 483 Gene3D G3DSA:3.40.309.10 262 451 1.0E-185 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_09655 59fd50a457736c15100dd4921e4748ae 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_09655 59fd50a457736c15100dd4921e4748ae 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 5.6E-214 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AYJ52_09655 59fd50a457736c15100dd4921e4748ae 483 SUPERFAMILY SSF53720 6 482 3.14E-174 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_09655 59fd50a457736c15100dd4921e4748ae 483 Gene3D G3DSA:3.40.605.10 21 474 1.0E-185 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_09655 59fd50a457736c15100dd4921e4748ae 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_09655 59fd50a457736c15100dd4921e4748ae 483 Pfam PF00171 Aldehyde dehydrogenase family 20 478 2.3E-174 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 SUPERFAMILY SSF63411 24 246 1.83E-41 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 Pfam PF05193 Peptidase M16 inactive domain 208 391 3.2E-8 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 SUPERFAMILY SSF63411 261 523 1.51E-54 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 Gene3D G3DSA:3.30.830.10 499 950 9.2E-111 T 11-10-2018 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 Gene3D G3DSA:3.30.830.10 260 487 7.7E-56 T 11-10-2018 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 SUPERFAMILY SSF63411 522 774 2.59E-52 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 Gene3D G3DSA:3.30.830.10 3 254 3.0E-82 T 11-10-2018 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 Gene3D G3DSA:3.30.830.10 530 787 9.2E-111 T 11-10-2018 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 Pfam PF08367 Peptidase M16C associated 466 715 7.1E-57 T 11-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 SUPERFAMILY SSF63411 791 975 9.67E-40 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 SMART SM01264 466 715 3.8E-79 T 11-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 AYJ52_15390 dd7a26b35fefd297195e451e71d4d812 979 Pfam PF00675 Insulinase (Peptidase family M16) 63 154 5.4E-8 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AYJ52_15220 ca823a2fa70fd0343f2040f6d78eaf22 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 AYJ52_15220 ca823a2fa70fd0343f2040f6d78eaf22 217 SMART SM00882 9 206 2.7E-64 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_15220 ca823a2fa70fd0343f2040f6d78eaf22 217 Gene3D G3DSA:3.40.1080.10 4 215 2.7E-85 T 11-10-2018 AYJ52_15220 ca823a2fa70fd0343f2040f6d78eaf22 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 1.2E-89 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AYJ52_15220 ca823a2fa70fd0343f2040f6d78eaf22 217 SUPERFAMILY SSF100950 8 212 6.98E-64 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_15220 ca823a2fa70fd0343f2040f6d78eaf22 217 Pfam PF01144 Coenzyme A transferase 9 203 1.3E-38 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 PIRSF PIRSF000098 1 431 4.0E-162 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 1.5E-19 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 Gene3D G3DSA:3.30.70.260 347 419 9.1E-160 T 11-10-2018 AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 Gene3D G3DSA:3.30.360.10 134 346 9.1E-160 T 11-10-2018 AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 SUPERFAMILY SSF51735 2 156 2.92E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 SUPERFAMILY SSF55021 350 420 3.23E-11 T 11-10-2018 AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 SUPERFAMILY SSF55347 135 300 7.19E-54 T 11-10-2018 AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 Pfam PF00742 Homoserine dehydrogenase 135 313 2.1E-65 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 Pfam PF01842 ACT domain 352 417 1.8E-11 T 11-10-2018 IPR002912 ACT domain AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 Gene3D G3DSA:3.40.50.720 4 338 9.1E-160 T 11-10-2018 AYJ52_06420 0d2b95653e940dadb1b130b810770b5c 433 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AYJ52_17960 8a0917fed1e5cfdf0d5f344c0428d856 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 3.3E-37 T 11-10-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AYJ52_17960 8a0917fed1e5cfdf0d5f344c0428d856 96 Gene3D G3DSA:3.30.70.1060 1 94 9.1E-34 T 11-10-2018 AYJ52_17960 8a0917fed1e5cfdf0d5f344c0428d856 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 6.5E-43 T 11-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AYJ52_17960 8a0917fed1e5cfdf0d5f344c0428d856 96 SUPERFAMILY SSF54909 1 93 3.93E-35 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_17960 8a0917fed1e5cfdf0d5f344c0428d856 96 PIRSF PIRSF001486 1 94 1.0E-43 T 11-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AYJ52_17960 8a0917fed1e5cfdf0d5f344c0428d856 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 3.0E-16 T 11-10-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AYJ52_12225 3932199c794a6d8139242c2650d1c8eb 127 Gene3D G3DSA:3.10.129.10 2 127 1.7E-32 T 11-10-2018 AYJ52_12225 3932199c794a6d8139242c2650d1c8eb 127 Pfam PF03061 Thioesterase superfamily 43 110 1.8E-6 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AYJ52_12225 3932199c794a6d8139242c2650d1c8eb 127 SUPERFAMILY SSF54637 9 124 2.11E-23 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_12225 3932199c794a6d8139242c2650d1c8eb 127 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 12 123 2.4E-19 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AYJ52_07695 fb023385e9477ad6a213cdcd42c8e1cb 727 SMART SM00245 360 570 3.2E-34 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AYJ52_07695 fb023385e9477ad6a213cdcd42c8e1cb 727 SUPERFAMILY SSF52096 225 574 1.08E-53 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_07695 fb023385e9477ad6a213cdcd42c8e1cb 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 574 722 4.6E-31 T 11-10-2018 IPR020992 Tail specific protease, C-terminal AYJ52_07695 fb023385e9477ad6a213cdcd42c8e1cb 727 Gene3D G3DSA:2.30.42.10 267 354 1.5E-12 T 11-10-2018 AYJ52_07695 fb023385e9477ad6a213cdcd42c8e1cb 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 236 589 8.6E-74 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AYJ52_07695 fb023385e9477ad6a213cdcd42c8e1cb 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 274 352 4.7E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_07695 fb023385e9477ad6a213cdcd42c8e1cb 727 SUPERFAMILY SSF50156 273 357 2.07E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AYJ52_07695 fb023385e9477ad6a213cdcd42c8e1cb 727 Gene3D G3DSA:3.90.226.10 359 588 4.0E-54 T 11-10-2018 AYJ52_07695 fb023385e9477ad6a213cdcd42c8e1cb 727 Pfam PF03572 Peptidase family S41 395 568 3.1E-40 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AYJ52_07695 fb023385e9477ad6a213cdcd42c8e1cb 727 SMART SM00228 276 356 3.1E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_17490 23ffe91f6af009e95f9bc7065ff36143 491 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 479 2.8E-124 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AYJ52_17490 23ffe91f6af009e95f9bc7065ff36143 491 Pfam PF02321 Outer membrane efflux protein 292 475 4.7E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_17490 23ffe91f6af009e95f9bc7065ff36143 491 Pfam PF02321 Outer membrane efflux protein 74 266 6.3E-29 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_17490 23ffe91f6af009e95f9bc7065ff36143 491 Gene3D G3DSA:1.20.1600.10 64 480 3.5E-132 T 11-10-2018 AYJ52_17490 23ffe91f6af009e95f9bc7065ff36143 491 SUPERFAMILY SSF56954 7 481 8.11E-108 T 11-10-2018 AYJ52_17490 23ffe91f6af009e95f9bc7065ff36143 491 Gene3D G3DSA:2.20.200.10 111 368 3.5E-132 T 11-10-2018 AYJ52_09070 c7b02ab97fe9c92126a66b6be1134161 249 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 141 169 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AYJ52_09070 c7b02ab97fe9c92126a66b6be1134161 249 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 64 92 0.15 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_09070 c7b02ab97fe9c92126a66b6be1134161 249 Gene3D G3DSA:2.160.10.10 22 230 3.3E-53 T 11-10-2018 AYJ52_09070 c7b02ab97fe9c92126a66b6be1134161 249 SUPERFAMILY SSF51161 68 205 1.39E-37 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_09070 c7b02ab97fe9c92126a66b6be1134161 249 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 167 3.6E-11 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_17765 cc76731746ce242bc8c7699e3a87c5e1 327 SUPERFAMILY SSF51735 172 262 8.86E-6 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_17765 cc76731746ce242bc8c7699e3a87c5e1 327 Gene3D G3DSA:3.40.50.720 174 323 1.5E-34 T 11-10-2018 AYJ52_17765 cc76731746ce242bc8c7699e3a87c5e1 327 Pfam PF13478 XdhC Rossmann domain 175 319 9.7E-35 T 11-10-2018 IPR027051 XdhC Rossmann domain AYJ52_17765 cc76731746ce242bc8c7699e3a87c5e1 327 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 21 320 1.4E-86 T 11-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC AYJ52_17765 cc76731746ce242bc8c7699e3a87c5e1 327 Pfam PF02625 XdhC and CoxI family 17 82 3.5E-14 T 11-10-2018 IPR003777 XdhC- CoxI AYJ52_17890 242cf21aaaa8972b639e30f639021a4b 698 Pfam PF00550 Phosphopantetheine attachment site 208 258 1.3E-9 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AYJ52_17890 242cf21aaaa8972b639e30f639021a4b 698 SUPERFAMILY SSF52777 15 166 1.22E-8 T 11-10-2018 AYJ52_17890 242cf21aaaa8972b639e30f639021a4b 698 SUPERFAMILY SSF52777 455 698 1.22E-36 T 11-10-2018 AYJ52_17890 242cf21aaaa8972b639e30f639021a4b 698 Gene3D G3DSA:3.40.50.1820 182 282 1.3E-13 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17890 242cf21aaaa8972b639e30f639021a4b 698 ProSitePatterns PS00012 Phosphopantetheine attachment site. 218 233 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AYJ52_17890 242cf21aaaa8972b639e30f639021a4b 698 SUPERFAMILY SSF52777 279 450 1.67E-34 T 11-10-2018 AYJ52_17890 242cf21aaaa8972b639e30f639021a4b 698 Pfam PF00668 Condensation domain 275 698 1.4E-58 T 11-10-2018 IPR001242 Condensation domain AYJ52_17890 242cf21aaaa8972b639e30f639021a4b 698 Gene3D G3DSA:3.30.559.10 283 646 5.5E-75 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AYJ52_17890 242cf21aaaa8972b639e30f639021a4b 698 Gene3D G3DSA:3.30.559.30 454 698 5.5E-75 T 11-10-2018 AYJ52_17890 242cf21aaaa8972b639e30f639021a4b 698 SUPERFAMILY SSF47336 189 258 2.62E-12 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 SUPERFAMILY SSF47928 3 106 4.18E-25 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.861 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 5.4E-53 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 1.0E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.0E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 1.0E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 1.0E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 1.0E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 Gene3D G3DSA:1.10.520.20 2 107 6.3E-30 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05840 6f27d3c5612b0dd153c7eb4842574359 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 8.4E-43 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 Pfam PF01619 Proline dehydrogenase 206 506 2.9E-98 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 Gene3D G3DSA:3.20.20.220 143 547 2.3E-148 T 11-10-2018 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 SUPERFAMILY SSF81935 25 197 2.88E-62 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 Gene3D G3DSA:3.40.605.10 568 1049 2.1E-144 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 PIRSF PIRSF000197 11 1249 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 Pfam PF00171 Aldehyde dehydrogenase family 598 1048 7.8E-118 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 84 195 1.3E-44 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 SUPERFAMILY SSF51730 198 555 7.06E-119 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 849 860 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 547 1049 5.3E-222 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 Gene3D G3DSA:3.20.20.220 24 121 2.5E-10 T 11-10-2018 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 Gene3D G3DSA:3.40.309.10 826 1022 2.1E-144 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_13300 05586bd3391d1d1f7984519b4f2fa112 1250 SUPERFAMILY SSF53720 568 1049 6.28E-127 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 11-10-2018 IPR033135 ClpP, histidine active site AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 44.024 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 Pfam PF00574 Clp protease 20 199 1.5E-88 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 SUPERFAMILY SSF52096 18 199 2.53E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 Gene3D G3DSA:3.90.226.10 3 201 7.1E-83 T 11-10-2018 AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 4.8E-106 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 6.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 6.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 6.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 6.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 6.6E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AYJ52_07615 61c62b5fe7134db3dc3caa59d77b59cd 201 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 11-10-2018 IPR018215 ClpP, Ser active site AYJ52_11185 bbf67466e5119e813337e738127f94d1 259 Pfam PF01435 Peptidase family M48 75 245 6.5E-33 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AYJ52_02325 3282e26f6cfdf67951d0f6550def9d1d 199 SUPERFAMILY SSF48498 90 198 5.19E-17 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_02325 3282e26f6cfdf67951d0f6550def9d1d 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 35 66 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AYJ52_02325 3282e26f6cfdf67951d0f6550def9d1d 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 5.3E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_02325 3282e26f6cfdf67951d0f6550def9d1d 199 SUPERFAMILY SSF46689 18 94 1.2E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_02325 3282e26f6cfdf67951d0f6550def9d1d 199 Gene3D G3DSA:1.10.357.10 15 199 3.7E-54 T 11-10-2018 AYJ52_02325 3282e26f6cfdf67951d0f6550def9d1d 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.0E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_02325 3282e26f6cfdf67951d0f6550def9d1d 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.0E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 267 38.61 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 8 266 7.2E-114 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 100 1.5E-44 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 Gene3D G3DSA:3.90.226.10 1 267 1.0E-93 T 11-10-2018 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 105 118 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 86 102 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 40 51 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 149 158 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 65 83 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 121 134 2.0E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_08590 c2906f64fd7005a4e00e12633eb170c1 273 SUPERFAMILY SSF52096 8 265 2.85E-83 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_05280 b68f343336be076a871747248a294121 241 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 35 143 9.4E-22 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AYJ52_05280 b68f343336be076a871747248a294121 241 Gene3D G3DSA:3.10.50.40 98 241 5.1E-54 T 11-10-2018 AYJ52_05280 b68f343336be076a871747248a294121 241 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 151 238 2.9E-30 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ52_05280 b68f343336be076a871747248a294121 241 SUPERFAMILY SSF54534 43 241 2.55E-56 T 11-10-2018 AYJ52_05280 b68f343336be076a871747248a294121 241 Gene3D G3DSA:1.10.287.460 40 97 1.1E-9 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AYJ52_18175 a05ca9dba5df110a44c826d3d61c06cc 275 Gene3D G3DSA:3.10.350.10 51 105 1.1E-13 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_18175 a05ca9dba5df110a44c826d3d61c06cc 275 Gene3D G3DSA:2.70.70.10 131 275 7.5E-32 T 11-10-2018 IPR011055 Duplicated hybrid motif AYJ52_18175 a05ca9dba5df110a44c826d3d61c06cc 275 Pfam PF01476 LysM domain 55 97 3.8E-12 T 11-10-2018 IPR018392 LysM domain AYJ52_18175 a05ca9dba5df110a44c826d3d61c06cc 275 SMART SM00257 54 98 1.6E-10 T 11-10-2018 IPR018392 LysM domain AYJ52_18175 a05ca9dba5df110a44c826d3d61c06cc 275 Pfam PF01551 Peptidase family M23 177 269 1.8E-28 T 11-10-2018 IPR016047 Peptidase M23 AYJ52_18175 a05ca9dba5df110a44c826d3d61c06cc 275 SUPERFAMILY SSF51261 54 273 6.8E-46 T 11-10-2018 IPR011055 Duplicated hybrid motif AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 Gene3D G3DSA:3.90.650.10 800 964 1.2E-19 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 Gene3D G3DSA:3.90.650.10 415 599 8.0E-59 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 Pfam PF02769 AIR synthase related protein, C-terminal domain 862 948 4.1E-6 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 Pfam PF02769 AIR synthase related protein, C-terminal domain 424 582 1.8E-30 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 SUPERFAMILY SSF56042 421 648 3.14E-50 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 5 1275 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1277 20.31 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 Gene3D G3DSA:3.30.1330.10 208 414 4.3E-42 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1022 1276 6.9E-106 T 11-10-2018 AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 Gene3D G3DSA:3.30.1330.10 608 799 7.3E-27 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 SUPERFAMILY SSF55326 215 420 2.89E-61 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 Gene3D G3DSA:3.40.50.880 965 1277 2.6E-134 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 SUPERFAMILY SSF82697 1 145 3.3E-31 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 SMART SM01211 1022 1276 3.9E-155 T 11-10-2018 AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 SUPERFAMILY SSF52317 1019 1276 1.56E-95 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 SUPERFAMILY SSF109736 149 214 5.1E-21 T 11-10-2018 AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 SUPERFAMILY SSF55326 611 809 2.88E-68 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 Gene3D G3DSA:1.10.8.750 147 207 2.6E-26 T 11-10-2018 AYJ52_18775 d2f3174215befc5f36ac730492772e1a 1277 SUPERFAMILY SSF56042 816 1015 7.92E-41 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AYJ52_13310 9c89f67d9f49b662a3f298d5514299d3 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 492 2.3E-219 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AYJ52_13310 9c89f67d9f49b662a3f298d5514299d3 496 Pfam PF00474 Sodium:solute symporter family 35 437 1.5E-131 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AYJ52_13310 9c89f67d9f49b662a3f298d5514299d3 496 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AYJ52_13310 9c89f67d9f49b662a3f298d5514299d3 496 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AYJ52_13310 9c89f67d9f49b662a3f298d5514299d3 496 Gene3D G3DSA:1.20.1730.10 23 494 2.3E-94 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AYJ52_13310 9c89f67d9f49b662a3f298d5514299d3 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 2.6E-122 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AYJ52_11725 e714558b83e48e9d477b3b3f8c69a514 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ52_11725 e714558b83e48e9d477b3b3f8c69a514 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 4.5E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AYJ52_11725 e714558b83e48e9d477b3b3f8c69a514 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 4.5E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AYJ52_11725 e714558b83e48e9d477b3b3f8c69a514 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 4.5E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AYJ52_11725 e714558b83e48e9d477b3b3f8c69a514 107 SUPERFAMILY SSF54862 3 103 3.93E-25 T 11-10-2018 AYJ52_11725 e714558b83e48e9d477b3b3f8c69a514 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 1.6E-19 T 11-10-2018 IPR022569 Ferredoxin, C-terminal AYJ52_11725 e714558b83e48e9d477b3b3f8c69a514 107 Gene3D G3DSA:3.30.70.20 2 101 9.9E-33 T 11-10-2018 AYJ52_11725 e714558b83e48e9d477b3b3f8c69a514 107 Pfam PF00037 4Fe-4S binding domain 34 55 5.6E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 403 2.3E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 SMART SM00387 291 405 2.0E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 SUPERFAMILY SSF47384 162 247 3.14E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 383 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 402 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 344 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 Gene3D G3DSA:3.30.565.10 253 412 4.3E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 SUPERFAMILY SSF55874 236 403 1.27E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 Gene3D G3DSA:1.10.287.130 150 244 4.8E-12 T 11-10-2018 AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 246 2.0E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_01995 3005f146eec7824ee9cde0041514c580 423 SMART SM00388 178 246 1.3E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_13095 3c22a80af5a40f80512e27a840188376 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 2.4E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_13095 3c22a80af5a40f80512e27a840188376 190 Gene3D G3DSA:1.10.357.10 1 183 2.2E-39 T 11-10-2018 AYJ52_13095 3c22a80af5a40f80512e27a840188376 190 SUPERFAMILY SSF46689 2 65 1.8E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_13095 3c22a80af5a40f80512e27a840188376 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 9.1E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_13095 3c22a80af5a40f80512e27a840188376 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 9.1E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_13095 3c22a80af5a40f80512e27a840188376 190 SUPERFAMILY SSF48498 76 175 9.71E-9 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 SUPERFAMILY SSF69255 438 532 3.92E-24 T 11-10-2018 AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 Gene3D G3DSA:2.30.110.50 32 377 4.7E-42 T 11-10-2018 AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 Gene3D G3DSA:3.55.50.10 111 221 4.7E-42 T 11-10-2018 AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 588 2.1E-55 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 Pfam PF05954 Phage late control gene D protein (GPD) 43 384 2.2E-59 T 11-10-2018 AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 561 668 2.6E-36 T 11-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 850 997 1.1E-42 T 11-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 Gene3D G3DSA:2.40.50.230 429 538 3.1E-31 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 Gene3D G3DSA:3.30.1920.30 254 336 4.7E-42 T 11-10-2018 AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 SUPERFAMILY SSF69279 24 216 1.25E-38 T 11-10-2018 AYJ52_04315 7bdeae34ed7b3c66e45d27db5ee03355 1109 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 25 586 5.3E-69 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AYJ52_01940 9cfc56fa6fb38ab173f3c28dbc12ace5 284 Pfam PF09612 Bacterial protein of unknown function (HtrL_YibB) 4 266 1.8E-75 T 11-10-2018 IPR011735 HtrL protein AYJ52_18470 ce5e0da7d574378cce6b2fce0c3d8f39 380 SUPERFAMILY SSF53756 6 375 1.03E-112 T 11-10-2018 AYJ52_18470 ce5e0da7d574378cce6b2fce0c3d8f39 380 Gene3D G3DSA:3.40.50.2000 6 371 1.5E-130 T 11-10-2018 AYJ52_18470 ce5e0da7d574378cce6b2fce0c3d8f39 380 Gene3D G3DSA:3.40.50.2000 192 360 1.5E-130 T 11-10-2018 AYJ52_18470 ce5e0da7d574378cce6b2fce0c3d8f39 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 373 2.4E-111 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AYJ52_18470 ce5e0da7d574378cce6b2fce0c3d8f39 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 374 4.1E-131 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AYJ52_12785 2728530f22be035bdb1dd287d7003791 488 SUPERFAMILY SSF103473 18 474 1.03E-58 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_12785 2728530f22be035bdb1dd287d7003791 488 Pfam PF00083 Sugar (and other) transporter 55 456 7.0E-39 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AYJ52_12785 2728530f22be035bdb1dd287d7003791 488 Gene3D G3DSA:1.20.1250.20 33 464 5.7E-63 T 11-10-2018 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 Gene3D G3DSA:3.40.1500.10 1 316 5.8E-139 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 173 197 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 PIRSF PIRSF000166 1 310 5.0E-120 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 Pfam PF01218 Coproporphyrinogen III oxidase 11 309 1.1E-119 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 SUPERFAMILY SSF102886 4 309 4.58E-126 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 PRINTS PR00073 Coprogen oxidase signature 38 54 2.1E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 PRINTS PR00073 Coprogen oxidase signature 97 121 2.1E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 PRINTS PR00073 Coprogen oxidase signature 241 268 2.1E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 PRINTS PR00073 Coprogen oxidase signature 269 295 2.1E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 PRINTS PR00073 Coprogen oxidase signature 132 154 2.1E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 PRINTS PR00073 Coprogen oxidase signature 169 198 2.1E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 PRINTS PR00073 Coprogen oxidase signature 55 76 2.1E-75 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_02835 9bb1aa6fabbad9175be73b8e704e9e26 316 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 6 284 50.002 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 Gene3D G3DSA:1.10.4160.10 31 490 5.6E-15 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily AYJ52_12565 493df7a213a37471699915488a0568e2 1154 Pfam PF00072 Response regulator receiver domain 932 1042 4.4E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 Pfam PF00512 His Kinase A (phospho-acceptor) domain 684 749 1.3E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 SUPERFAMILY SSF55874 739 903 1.06E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_12565 493df7a213a37471699915488a0568e2 1154 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 796 903 8.4E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_12565 493df7a213a37471699915488a0568e2 1154 SMART SM00387 796 909 2.9E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_12565 493df7a213a37471699915488a0568e2 1154 SUPERFAMILY SSF52172 928 1081 8.68E-26 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_12565 493df7a213a37471699915488a0568e2 1154 SMART SM00388 683 749 6.8E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 Gene3D G3DSA:1.10.287.130 670 749 5.4E-23 T 11-10-2018 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 SUPERFAMILY SSF47384 670 750 1.04E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 867 885 4.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 891 904 4.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 846 4.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 PRINTS PR00344 Bacterial sensor protein C-terminal signature 850 860 4.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 Gene3D G3DSA:3.40.50.12740 929 1105 7.5E-24 T 11-10-2018 AYJ52_12565 493df7a213a37471699915488a0568e2 1154 Gene3D G3DSA:3.30.565.10 750 909 2.2E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_12565 493df7a213a37471699915488a0568e2 1154 SMART SM00448 930 1042 3.4E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 798 924 2.7E-33 T 11-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 Pfam PF13244 Domain of unknown function (DUF4040) 624 685 5.1E-18 T 11-10-2018 IPR025383 Domain of unknown function DUF4040 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 Pfam PF00361 Proton-conducting membrane transporter 130 416 2.0E-63 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 105 1.4E-7 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 2.8E-36 T 11-10-2018 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 2.8E-36 T 11-10-2018 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 2.8E-36 T 11-10-2018 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 2.8E-36 T 11-10-2018 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 2.8E-36 T 11-10-2018 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 2.8E-36 T 11-10-2018 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 260 282 5.3E-6 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AYJ52_06940 fcea1b8cffa43500ab7d57be296bf853 949 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 5.3E-6 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AYJ52_09245 1436aa4ed0e61d4987730058642ae3d9 373 Gene3D G3DSA:2.40.30.170 258 373 1.4E-36 T 11-10-2018 AYJ52_09245 1436aa4ed0e61d4987730058642ae3d9 373 Gene3D G3DSA:1.10.287.470 110 141 7.7E-11 T 11-10-2018 AYJ52_09245 1436aa4ed0e61d4987730058642ae3d9 373 Gene3D G3DSA:1.10.287.470 144 216 1.3E-5 T 11-10-2018 AYJ52_09245 1436aa4ed0e61d4987730058642ae3d9 373 SUPERFAMILY SSF111369 80 158 1.96E-9 T 11-10-2018 AYJ52_09245 1436aa4ed0e61d4987730058642ae3d9 373 SUPERFAMILY SSF111369 147 204 6.8E-5 T 11-10-2018 AYJ52_09245 1436aa4ed0e61d4987730058642ae3d9 373 SUPERFAMILY SSF111369 210 297 7.85E-10 T 11-10-2018 AYJ52_09245 1436aa4ed0e61d4987730058642ae3d9 373 Gene3D G3DSA:2.40.50.100 77 109 7.7E-11 T 11-10-2018 AYJ52_09245 1436aa4ed0e61d4987730058642ae3d9 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 77 320 1.0E-13 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_09245 1436aa4ed0e61d4987730058642ae3d9 373 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 88 108 4.3E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09245 1436aa4ed0e61d4987730058642ae3d9 373 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 359 373 4.3E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_10615 085c9ce3a944bfd3b04a6a4c23642bcb 440 SUPERFAMILY SSF55920 177 436 2.49E-84 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AYJ52_10615 085c9ce3a944bfd3b04a6a4c23642bcb 440 Pfam PF00557 Metallopeptidase family M24 182 413 1.5E-62 T 11-10-2018 IPR000994 Peptidase M24 AYJ52_10615 085c9ce3a944bfd3b04a6a4c23642bcb 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AYJ52_10615 085c9ce3a944bfd3b04a6a4c23642bcb 440 Gene3D G3DSA:3.40.350.10 4 173 3.6E-51 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AYJ52_10615 085c9ce3a944bfd3b04a6a4c23642bcb 440 Gene3D G3DSA:3.90.230.10 174 440 4.1E-99 T 11-10-2018 AYJ52_10615 085c9ce3a944bfd3b04a6a4c23642bcb 440 SMART SM01011 3 139 4.4E-52 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AYJ52_10615 085c9ce3a944bfd3b04a6a4c23642bcb 440 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 126 1.3E-35 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AYJ52_10615 085c9ce3a944bfd3b04a6a4c23642bcb 440 SUPERFAMILY SSF53092 3 176 1.23E-46 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AYJ52_08025 35f993ab2729f35f97873be2cce2e803 98 SUPERFAMILY SSF53098 2 59 9.29E-11 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_08025 35f993ab2729f35f97873be2cce2e803 98 Pfam PF13683 Integrase core domain 2 52 2.5E-14 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_03140 0028e00424f3c4aac8e082efb4f15e30 184 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 9 144 3.1E-21 T 11-10-2018 IPR013362 Pilus modification type IV, PilV AYJ52_03475 25ce1fe04295f6ceacb2193ae2edd3aa 109 SUPERFAMILY SSF55729 1 95 1.86E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_03475 25ce1fe04295f6ceacb2193ae2edd3aa 109 Pfam PF00583 Acetyltransferase (GNAT) family 25 95 1.7E-11 T 11-10-2018 IPR000182 GNAT domain AYJ52_03475 25ce1fe04295f6ceacb2193ae2edd3aa 109 Gene3D G3DSA:3.40.630.30 3 105 2.0E-26 T 11-10-2018 AYJ52_15690 b8b450a8a613e83f0c81c94b5780bef7 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 9 237 36.901 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AYJ52_15690 b8b450a8a613e83f0c81c94b5780bef7 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 182 199 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AYJ52_15690 b8b450a8a613e83f0c81c94b5780bef7 250 Gene3D G3DSA:3.40.1180.10 2 237 1.3E-90 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AYJ52_15690 b8b450a8a613e83f0c81c94b5780bef7 250 SUPERFAMILY SSF64005 8 232 1.18E-81 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AYJ52_15690 b8b450a8a613e83f0c81c94b5780bef7 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 16 236 8.8E-76 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AYJ52_15690 b8b450a8a613e83f0c81c94b5780bef7 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 9 236 3.9E-84 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AYJ52_18170 8dd22217fc1bc61fd88940bed248102b 309 SUPERFAMILY SSF46785 4 113 1.8E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_18170 8dd22217fc1bc61fd88940bed248102b 309 Gene3D G3DSA:1.10.10.10 3 90 5.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_18170 8dd22217fc1bc61fd88940bed248102b 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.0E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18170 8dd22217fc1bc61fd88940bed248102b 309 SUPERFAMILY SSF53850 90 300 1.27E-34 T 11-10-2018 AYJ52_18170 8dd22217fc1bc61fd88940bed248102b 309 Pfam PF03466 LysR substrate binding domain 92 296 3.2E-29 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_18170 8dd22217fc1bc61fd88940bed248102b 309 Gene3D G3DSA:3.40.190.290 93 296 1.4E-43 T 11-10-2018 AYJ52_13565 e1c5f1018595d45991cbce77c0fe45c1 721 Gene3D G3DSA:3.20.20.360 10 578 9.3E-264 T 11-10-2018 AYJ52_13565 e1c5f1018595d45991cbce77c0fe45c1 721 Pfam PF01274 Malate synthase 17 693 3.1E-164 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AYJ52_13565 e1c5f1018595d45991cbce77c0fe45c1 721 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 716 0.0 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AYJ52_13565 e1c5f1018595d45991cbce77c0fe45c1 721 Hamap MF_00641 Malate synthase G [glcB]. 1 721 377.908 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AYJ52_13565 e1c5f1018595d45991cbce77c0fe45c1 721 Gene3D G3DSA:1.20.1220.12 579 721 3.1E-72 T 11-10-2018 AYJ52_13565 e1c5f1018595d45991cbce77c0fe45c1 721 SUPERFAMILY SSF51645 3 717 3.92E-293 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AYJ52_13565 e1c5f1018595d45991cbce77c0fe45c1 721 Gene3D G3DSA:2.170.170.11 132 261 9.3E-264 T 11-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AYJ52_10315 8b29c085076a2fc5149a2feb1eeb5944 334 SUPERFAMILY SSF56436 62 330 9.42E-68 T 11-10-2018 IPR016187 C-type lectin fold AYJ52_10315 8b29c085076a2fc5149a2feb1eeb5944 334 Gene3D G3DSA:3.90.1580.10 59 333 8.8E-77 T 11-10-2018 AYJ52_10315 8b29c085076a2fc5149a2feb1eeb5944 334 Pfam PF03781 Sulfatase-modifying factor enzyme 1 62 330 1.3E-63 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AYJ52_15095 55af3b4ac86d86a3aec8ab41d1251ee7 449 SUPERFAMILY SSF103473 11 432 6.67E-64 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_15095 55af3b4ac86d86a3aec8ab41d1251ee7 449 Gene3D G3DSA:1.20.1250.20 242 437 2.0E-21 T 11-10-2018 AYJ52_15095 55af3b4ac86d86a3aec8ab41d1251ee7 449 Pfam PF07690 Major Facilitator Superfamily 27 391 5.1E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_15095 55af3b4ac86d86a3aec8ab41d1251ee7 449 Gene3D G3DSA:1.20.1250.20 11 221 8.1E-43 T 11-10-2018 AYJ52_14845 d79e0ca53fc74f037f677a4ed37bd4f4 305 SUPERFAMILY SSF53850 89 298 1.24E-34 T 11-10-2018 AYJ52_14845 d79e0ca53fc74f037f677a4ed37bd4f4 305 Gene3D G3DSA:1.10.10.10 2 89 2.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14845 d79e0ca53fc74f037f677a4ed37bd4f4 305 SUPERFAMILY SSF46785 3 88 1.42E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14845 d79e0ca53fc74f037f677a4ed37bd4f4 305 Gene3D G3DSA:3.40.190.290 92 295 1.6E-50 T 11-10-2018 AYJ52_14845 d79e0ca53fc74f037f677a4ed37bd4f4 305 Pfam PF03466 LysR substrate binding domain 88 294 7.0E-35 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14845 d79e0ca53fc74f037f677a4ed37bd4f4 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.0E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_02020 4f5bd138d8e843f83b7bfd8f7ea253f9 189 Gene3D G3DSA:1.20.1440.20 17 187 7.3E-30 T 11-10-2018 IPR023353 LemA-like domain superfamily AYJ52_02020 4f5bd138d8e843f83b7bfd8f7ea253f9 189 Pfam PF04011 LemA family 6 166 4.1E-33 T 11-10-2018 IPR007156 LemA AYJ52_02020 4f5bd138d8e843f83b7bfd8f7ea253f9 189 SUPERFAMILY SSF140478 26 165 1.7E-31 T 11-10-2018 IPR023353 LemA-like domain superfamily AYJ52_14730 245f5eb1fab3f4dd2cf840e14432f485 160 SUPERFAMILY SSF48695 39 111 6.62E-5 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AYJ52_05925 235a4d35eefbba367ab8278a319ff2a9 704 SUPERFAMILY SSF56935 44 704 1.92E-78 T 11-10-2018 AYJ52_05925 235a4d35eefbba367ab8278a319ff2a9 704 Gene3D G3DSA:2.170.130.10 63 164 3.8E-11 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_05925 235a4d35eefbba367ab8278a319ff2a9 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 156 3.2E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_05925 235a4d35eefbba367ab8278a319ff2a9 704 Gene3D G3DSA:2.40.170.20 168 704 1.1E-55 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_05925 235a4d35eefbba367ab8278a319ff2a9 704 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 61 704 9.9E-233 T 11-10-2018 IPR010100 TonB-dependent copper receptor AYJ52_05925 235a4d35eefbba367ab8278a319ff2a9 704 Pfam PF00593 TonB dependent receptor 211 703 3.0E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_07370 4526a9d5490e42619970a6a4280c802c 369 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 117 312 1.5E-16 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AYJ52_07370 4526a9d5490e42619970a6a4280c802c 369 SUPERFAMILY SSF56219 101 319 9.55E-33 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AYJ52_07370 4526a9d5490e42619970a6a4280c802c 369 Gene3D G3DSA:3.60.10.10 105 322 7.9E-21 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 13 595 69.468 T 11-10-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 248 259 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 211 595 2.7E-162 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 Gene3D G3DSA:1.10.645.20 210 595 3.0E-143 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 207 595 41.057 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 46 173 2.5E-41 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 Gene3D G3DSA:3.30.460.80 5 153 3.7E-35 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 22 181 25.595 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 101 155 3.0E-25 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 SUPERFAMILY SSF143243 22 225 1.44E-58 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 45 172 2.8E-40 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 SUPERFAMILY SSF56762 221 595 2.62E-122 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 134 155 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09145 a3ea2768173c3443af8bad7bd082d4ef 595 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 325 595 2.2E-99 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 Gene3D G3DSA:3.30.450.20 197 311 2.3E-8 T 11-10-2018 AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 SMART SM00267 311 477 1.0E-34 T 11-10-2018 IPR000160 GGDEF domain AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 Gene3D G3DSA:3.30.450.20 32 170 1.8E-7 T 11-10-2018 AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 Gene3D G3DSA:3.30.70.270 312 477 7.9E-39 T 11-10-2018 AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 SUPERFAMILY SSF55785 43 150 3.81E-8 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 470 7.4E-34 T 11-10-2018 IPR000160 GGDEF domain AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 SUPERFAMILY SSF55785 216 318 2.09E-10 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 318 471 9.7E-32 T 11-10-2018 IPR000160 GGDEF domain AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 Pfam PF13188 PAS domain 7 72 0.057 T 11-10-2018 IPR000014 PAS domain AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 Pfam PF13188 PAS domain 199 262 0.043 T 11-10-2018 IPR000014 PAS domain AYJ52_18550 af659395c0be445fe907829b6bd942ae 479 SUPERFAMILY SSF55073 327 470 1.18E-30 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_09240 4ce75df17563a57253b3432aeda067e9 293 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 281 3.2E-17 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_09240 4ce75df17563a57253b3432aeda067e9 293 Gene3D G3DSA:3.40.50.1100 21 284 2.3E-60 T 11-10-2018 AYJ52_09240 4ce75df17563a57253b3432aeda067e9 293 SUPERFAMILY SSF53686 20 284 1.05E-51 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_09240 4ce75df17563a57253b3432aeda067e9 293 Gene3D G3DSA:3.40.50.1100 37 142 2.3E-60 T 11-10-2018 AYJ52_09240 4ce75df17563a57253b3432aeda067e9 293 PIRSF PIRSF006278 2 292 1.7E-72 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AYJ52_15190 d1067daf045e71590cd75319a41ed86c 241 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 81 109 - T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AYJ52_15190 d1067daf045e71590cd75319a41ed86c 241 Gene3D G3DSA:2.60.130.10 1 241 1.5E-101 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AYJ52_15190 d1067daf045e71590cd75319a41ed86c 241 Pfam PF00775 Dioxygenase 47 229 1.0E-45 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AYJ52_15190 d1067daf045e71590cd75319a41ed86c 241 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 11 42 6.7E-15 T 11-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 AYJ52_15190 d1067daf045e71590cd75319a41ed86c 241 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 17 238 8.6E-107 T 11-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 AYJ52_15190 d1067daf045e71590cd75319a41ed86c 241 SUPERFAMILY SSF49482 9 238 4.06E-73 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AYJ52_19560 fb2606fbb461c234c28b241ebb7fa0c5 320 Pfam PF13936 Helix-turn-helix domain 3 46 7.4E-15 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_19560 fb2606fbb461c234c28b241ebb7fa0c5 320 Gene3D G3DSA:3.30.420.10 169 319 1.2E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_19560 fb2606fbb461c234c28b241ebb7fa0c5 320 SUPERFAMILY SSF46689 6 113 6.27E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_19560 fb2606fbb461c234c28b241ebb7fa0c5 320 SUPERFAMILY SSF53098 171 315 4.55E-20 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_12835 7cdd7c0de6bbaa46f73a5bbf7359b081 228 SUPERFAMILY SSF52499 6 207 6.15E-44 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_12835 7cdd7c0de6bbaa46f73a5bbf7359b081 228 Pfam PF00857 Isochorismatase family 16 168 2.0E-27 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AYJ52_12835 7cdd7c0de6bbaa46f73a5bbf7359b081 228 Gene3D G3DSA:3.40.50.850 4 207 6.0E-46 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_06860 a87131e5ca94ba1b25c516fd9c2fba58 408 Pfam PF00482 Type II secretion system (T2SS), protein F 279 400 1.7E-28 T 11-10-2018 IPR018076 Type II secretion system F domain AYJ52_06860 a87131e5ca94ba1b25c516fd9c2fba58 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 197 2.0E-31 T 11-10-2018 IPR018076 Type II secretion system F domain AYJ52_06860 a87131e5ca94ba1b25c516fd9c2fba58 408 Gene3D G3DSA:1.20.81.30 261 371 6.8E-28 T 11-10-2018 AYJ52_06860 a87131e5ca94ba1b25c516fd9c2fba58 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 169 197 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AYJ52_06860 a87131e5ca94ba1b25c516fd9c2fba58 408 Gene3D G3DSA:1.20.81.30 60 176 1.9E-31 T 11-10-2018 AYJ52_06860 a87131e5ca94ba1b25c516fd9c2fba58 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 70 82 5.0E-18 T 11-10-2018 IPR003004 GspF/PilC family AYJ52_06860 a87131e5ca94ba1b25c516fd9c2fba58 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 373 387 5.0E-18 T 11-10-2018 IPR003004 GspF/PilC family AYJ52_06860 a87131e5ca94ba1b25c516fd9c2fba58 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 169 197 5.0E-18 T 11-10-2018 IPR003004 GspF/PilC family AYJ52_06860 a87131e5ca94ba1b25c516fd9c2fba58 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 408 5.0E-18 T 11-10-2018 IPR003004 GspF/PilC family AYJ52_00250 f959563ba665596f041f375cb90d6863 188 Gene3D G3DSA:1.10.10.60 5 51 2.0E-18 T 11-10-2018 AYJ52_00250 f959563ba665596f041f375cb90d6863 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.1E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_00250 f959563ba665596f041f375cb90d6863 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.1E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_00250 f959563ba665596f041f375cb90d6863 188 Gene3D G3DSA:1.10.357.10 52 183 8.6E-27 T 11-10-2018 AYJ52_00250 f959563ba665596f041f375cb90d6863 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 9.2E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_00250 f959563ba665596f041f375cb90d6863 188 SUPERFAMILY SSF46689 3 74 5.64E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_00250 f959563ba665596f041f375cb90d6863 188 SUPERFAMILY SSF48498 78 183 1.16E-19 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 4.9E-39 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 Gene3D G3DSA:3.40.50.10860 7 275 1.2E-102 T 11-10-2018 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 SUPERFAMILY SSF51735 127 278 1.71E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 280 2.5E-61 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 SUPERFAMILY SSF53223 2 121 6.43E-38 T 11-10-2018 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 281 35.282 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.6E-62 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AYJ52_00565 46f5e3723b5ac7289a2c6b08632fa8eb 282 Gene3D G3DSA:3.40.50.720 5 257 1.2E-102 T 11-10-2018 AYJ52_15000 05410c44bc2a00c12a0a43b17d77bc6c 306 Pfam PF00775 Dioxygenase 101 287 3.6E-59 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AYJ52_15000 05410c44bc2a00c12a0a43b17d77bc6c 306 SUPERFAMILY SSF49482 15 291 6.54E-83 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AYJ52_15000 05410c44bc2a00c12a0a43b17d77bc6c 306 Pfam PF04444 Catechol dioxygenase N terminus 23 92 1.2E-20 T 11-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 AYJ52_15000 05410c44bc2a00c12a0a43b17d77bc6c 306 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 133 161 - T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AYJ52_15000 05410c44bc2a00c12a0a43b17d77bc6c 306 Gene3D G3DSA:2.60.130.10 1 306 1.7E-119 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AYJ52_15000 05410c44bc2a00c12a0a43b17d77bc6c 306 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 2 287 3.0E-145 T 11-10-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 AYJ52_06635 24aa4c0393b622b24e9e2dedff5b04b7 231 Gene3D G3DSA:3.30.190.20 25 221 3.0E-76 T 11-10-2018 AYJ52_06635 24aa4c0393b622b24e9e2dedff5b04b7 231 SUPERFAMILY SSF56808 6 227 1.83E-79 T 11-10-2018 IPR023674 Ribosomal protein L1-like AYJ52_06635 24aa4c0393b622b24e9e2dedff5b04b7 231 Gene3D G3DSA:3.40.50.790 68 159 3.0E-76 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AYJ52_06635 24aa4c0393b622b24e9e2dedff5b04b7 231 Pfam PF00687 Ribosomal protein L1p/L10e family 35 220 2.6E-50 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AYJ52_06635 24aa4c0393b622b24e9e2dedff5b04b7 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 8.4E-101 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AYJ52_06635 24aa4c0393b622b24e9e2dedff5b04b7 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_06635 24aa4c0393b622b24e9e2dedff5b04b7 231 PIRSF PIRSF002155 1 227 3.5E-75 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_06635 24aa4c0393b622b24e9e2dedff5b04b7 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.221 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 PIRSF PIRSF000445 1 427 7.9E-138 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 414 1.2E-119 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 Gene3D G3DSA:3.40.50.720 157 313 1.3E-39 T 11-10-2018 AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 27.816 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 SUPERFAMILY SSF69742 1 153 1.31E-44 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 SUPERFAMILY SSF51735 159 315 2.99E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 413 6.7E-15 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 3.9E-46 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 306 6.0E-39 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 Gene3D G3DSA:3.30.460.30 2 154 3.1E-52 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AYJ52_09570 df8ddf43a34d50a6440f0d3fb4e5d9f8 427 SUPERFAMILY SSF69075 317 415 6.02E-21 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AYJ52_12350 135071b5cbb280661f87d9d53e565a1d 507 SUPERFAMILY SSF48179 187 291 3.91E-29 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_12350 135071b5cbb280661f87d9d53e565a1d 507 Gene3D G3DSA:3.30.750.190 295 412 3.9E-92 T 11-10-2018 AYJ52_12350 135071b5cbb280661f87d9d53e565a1d 507 Gene3D G3DSA:1.10.1040.50 191 495 3.9E-92 T 11-10-2018 AYJ52_12350 135071b5cbb280661f87d9d53e565a1d 507 Gene3D G3DSA:3.40.50.720 1 190 1.6E-67 T 11-10-2018 AYJ52_12350 135071b5cbb280661f87d9d53e565a1d 507 SUPERFAMILY SSF51735 4 187 3.18E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_12350 135071b5cbb280661f87d9d53e565a1d 507 SUPERFAMILY SSF48179 415 496 3.74E-17 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_12350 135071b5cbb280661f87d9d53e565a1d 507 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 186 6.7E-59 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_12350 135071b5cbb280661f87d9d53e565a1d 507 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 415 496 3.7E-16 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_12350 135071b5cbb280661f87d9d53e565a1d 507 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 285 7.7E-28 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_07020 2841f48b6a1329b87fb775bfeef77a54 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.4E-37 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_07020 2841f48b6a1329b87fb775bfeef77a54 89 Gene3D G3DSA:1.10.287.10 2 89 1.3E-34 T 11-10-2018 AYJ52_07020 2841f48b6a1329b87fb775bfeef77a54 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 8.0E-38 T 11-10-2018 AYJ52_07020 2841f48b6a1329b87fb775bfeef77a54 89 SUPERFAMILY SSF47060 3 89 1.65E-34 T 11-10-2018 IPR009068 S15/NS1, RNA-binding AYJ52_07020 2841f48b6a1329b87fb775bfeef77a54 89 SMART SM01387 8 88 1.3E-50 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07020 2841f48b6a1329b87fb775bfeef77a54 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07020 2841f48b6a1329b87fb775bfeef77a54 89 Pfam PF00312 Ribosomal protein S15 9 88 1.1E-35 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07020 2841f48b6a1329b87fb775bfeef77a54 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.989 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_07915 8923322d7919c0806c5f0c4d6304be0c 169 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 8 164 21.111 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AYJ52_07915 8923322d7919c0806c5f0c4d6304be0c 169 Gene3D G3DSA:3.30.160.150 28 169 1.6E-41 T 11-10-2018 AYJ52_13065 cc4ac5eac333c7ba13d5bfd1f9ced200 225 SUPERFAMILY SSF161098 16 205 1.57E-38 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_13065 cc4ac5eac333c7ba13d5bfd1f9ced200 225 Gene3D G3DSA:1.10.3720.10 8 222 1.4E-47 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_13065 cc4ac5eac333c7ba13d5bfd1f9ced200 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 114 8.7E-24 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AYJ52_13065 cc4ac5eac333c7ba13d5bfd1f9ced200 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 221 3.1E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_04660 a82b5ba6e2f3ba37a5fc92526c980c94 390 SUPERFAMILY SSF50952 53 382 7.06E-46 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AYJ52_04660 a82b5ba6e2f3ba37a5fc92526c980c94 390 Pfam PF07995 Glucose / Sorbosone dehydrogenase 56 384 1.1E-124 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AYJ52_04660 a82b5ba6e2f3ba37a5fc92526c980c94 390 Gene3D G3DSA:2.120.10.30 42 388 2.1E-105 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AYJ52_02530 abcd5e57bc6f65f0b064b160907dac02 191 Gene3D G3DSA:1.20.1540.10 3 190 7.0E-16 T 11-10-2018 IPR035952 Rhomboid-like superfamily AYJ52_02530 abcd5e57bc6f65f0b064b160907dac02 191 SUPERFAMILY SSF144091 11 188 1.7E-24 T 11-10-2018 AYJ52_02530 abcd5e57bc6f65f0b064b160907dac02 191 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 29 177 6.8E-46 T 11-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria AYJ52_02530 abcd5e57bc6f65f0b064b160907dac02 191 Pfam PF01694 Rhomboid family 39 182 1.4E-12 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AYJ52_10665 d7de2436ed907f8deb3200f9290e209c 133 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 118 1.6E-26 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AYJ52_10665 d7de2436ed907f8deb3200f9290e209c 133 SUPERFAMILY SSF52980 6 105 3.97E-18 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AYJ52_10665 d7de2436ed907f8deb3200f9290e209c 133 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 115 19.363 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AYJ52_10665 d7de2436ed907f8deb3200f9290e209c 133 Gene3D G3DSA:3.40.1350.10 10 131 4.5E-29 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AYJ52_10665 d7de2436ed907f8deb3200f9290e209c 133 Pfam PF02021 Uncharacterised protein family UPF0102 11 101 1.2E-23 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 2.3E-49 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 2.3E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 Gene3D G3DSA:1.10.540.10 1 118 8.6E-41 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 SUPERFAMILY SSF56645 2 238 2.62E-78 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 SUPERFAMILY SSF47203 225 375 7.25E-57 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 PIRSF PIRSF016578 124 194 0.011 T 11-10-2018 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 PIRSF PIRSF016578 210 376 5.9E-11 T 11-10-2018 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 PIRSF PIRSF016578 3 110 4.2E-6 T 11-10-2018 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 Gene3D G3DSA:2.40.110.10 119 231 1.2E-43 T 11-10-2018 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 116 9.8E-33 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_16600 5e26565138d0e54d3f13d0424dc0bd8d 378 Gene3D G3DSA:1.20.140.10 232 378 5.3E-55 T 11-10-2018 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 Gene3D G3DSA:3.40.47.10 143 400 4.1E-158 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 401 5.8E-140 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 Pfam PF02803 Thiolase, C-terminal domain 278 402 4.4E-46 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 Gene3D G3DSA:3.40.47.10 8 284 4.1E-158 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 4 403 2.6E-227 T 11-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 Pfam PF00108 Thiolase, N-terminal domain 7 270 7.9E-80 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 PIRSF PIRSF000429 1 404 3.0E-132 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 SUPERFAMILY SSF53901 5 278 2.56E-83 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AYJ52_17965 55f0af04297408b52b8535e3ffb4e23a 404 SUPERFAMILY SSF53901 279 402 7.47E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_01785 353f1fa9eee2f76f6c59fe29d50ed1d2 428 Gene3D G3DSA:3.90.190.20 291 425 1.1E-27 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_01785 353f1fa9eee2f76f6c59fe29d50ed1d2 428 SUPERFAMILY SSF53244 291 425 3.48E-25 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_01785 353f1fa9eee2f76f6c59fe29d50ed1d2 428 Pfam PF08245 Mur ligase middle domain 53 259 2.1E-16 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AYJ52_01785 353f1fa9eee2f76f6c59fe29d50ed1d2 428 PIRSF PIRSF001563 5 428 2.6E-108 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AYJ52_01785 353f1fa9eee2f76f6c59fe29d50ed1d2 428 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 423 2.6E-105 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AYJ52_01785 353f1fa9eee2f76f6c59fe29d50ed1d2 428 SUPERFAMILY SSF53623 11 288 5.72E-85 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_01785 353f1fa9eee2f76f6c59fe29d50ed1d2 428 Gene3D G3DSA:3.40.1190.10 2 290 3.6E-91 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 SMART SM00388 313 377 8.3E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 Gene3D G3DSA:3.30.450.20 180 298 6.5E-6 T 11-10-2018 AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 SUPERFAMILY SSF55785 192 243 5.52E-6 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 Pfam PF00512 His Kinase A (phospho-acceptor) domain 313 375 4.5E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 1.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 1.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 519 1.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 501 1.3E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 SMART SM00387 416 522 5.1E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 SUPERFAMILY SSF47384 303 375 7.46E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 SUPERFAMILY SSF55874 398 519 6.55E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 Gene3D G3DSA:3.30.565.10 381 521 4.1E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 518 2.4E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 Pfam PF00989 PAS fold 203 250 1.5E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 AYJ52_06400 e3de72796ea9a35e89349ef5ac3c536e 522 Gene3D G3DSA:1.10.287.130 299 375 1.3E-15 T 11-10-2018 AYJ52_10960 fa33dbab75f80fb92bcf16f5215cfb8d 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 4.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_10960 fa33dbab75f80fb92bcf16f5215cfb8d 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 4.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_10960 fa33dbab75f80fb92bcf16f5215cfb8d 237 SMART SM00345 17 76 2.2E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_10960 fa33dbab75f80fb92bcf16f5215cfb8d 237 Gene3D G3DSA:1.20.120.530 94 237 4.1E-27 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_10960 fa33dbab75f80fb92bcf16f5215cfb8d 237 SUPERFAMILY SSF46785 6 80 8.97E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_10960 fa33dbab75f80fb92bcf16f5215cfb8d 237 Gene3D G3DSA:1.10.10.10 6 87 1.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10960 fa33dbab75f80fb92bcf16f5215cfb8d 237 SMART SM00895 100 230 3.4E-20 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_10960 fa33dbab75f80fb92bcf16f5215cfb8d 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 2.1E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_10960 fa33dbab75f80fb92bcf16f5215cfb8d 237 Pfam PF07729 FCD domain 101 229 2.8E-23 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_10960 fa33dbab75f80fb92bcf16f5215cfb8d 237 SUPERFAMILY SSF48008 96 233 3.14E-25 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_10155 1d3cededae2092698456288d12802fc9 270 SMART SM00346 23 112 8.5E-35 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_10155 1d3cededae2092698456288d12802fc9 270 Pfam PF09339 IclR helix-turn-helix domain 26 74 1.1E-16 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_10155 1d3cededae2092698456288d12802fc9 270 Pfam PF01614 Bacterial transcriptional regulator 141 267 5.1E-34 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AYJ52_10155 1d3cededae2092698456288d12802fc9 270 SUPERFAMILY SSF55781 88 268 6.15E-35 T 11-10-2018 AYJ52_10155 1d3cededae2092698456288d12802fc9 270 Gene3D G3DSA:1.10.10.10 8 90 3.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10155 1d3cededae2092698456288d12802fc9 270 Gene3D G3DSA:3.30.450.40 91 269 1.5E-37 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_10155 1d3cededae2092698456288d12802fc9 270 SUPERFAMILY SSF46785 24 95 6.36E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_17725 3abd1df154a99862cc8d598d199f8ffe 513 SUPERFAMILY SSF103473 330 494 3.27E-13 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_17725 3abd1df154a99862cc8d598d199f8ffe 513 SUPERFAMILY SSF103473 14 313 9.02E-25 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_17725 3abd1df154a99862cc8d598d199f8ffe 513 Gene3D G3DSA:1.20.1250.20 3 499 9.1E-143 T 11-10-2018 AYJ52_17725 3abd1df154a99862cc8d598d199f8ffe 513 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AYJ52_17725 3abd1df154a99862cc8d598d199f8ffe 513 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 10 499 2.2E-116 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AYJ52_17725 3abd1df154a99862cc8d598d199f8ffe 513 Pfam PF00854 POT family 91 463 5.5E-62 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 Gene3D G3DSA:3.40.50.11260 416 503 1.1E-31 T 11-10-2018 AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 Gene3D G3DSA:3.30.230.80 244 415 1.9E-66 T 11-10-2018 AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 Gene3D G3DSA:1.20.120.790 509 639 1.1E-41 T 11-10-2018 IPR037196 HSP90, C-terminal domain AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 Pfam PF00183 Hsp90 protein 235 637 3.5E-126 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 SMART SM00387 29 186 8.0E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 638 31.393 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 Gene3D G3DSA:3.30.565.10 1 229 4.3E-78 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 PIRSF PIRSF002583 1 639 2.0E-213 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 PRINTS PR00775 90kDa heat shock protein signature 7 27 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 PRINTS PR00775 90kDa heat shock protein signature 174 191 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 PRINTS PR00775 90kDa heat shock protein signature 192 210 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 PRINTS PR00775 90kDa heat shock protein signature 95 112 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 PRINTS PR00775 90kDa heat shock protein signature 77 94 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 PRINTS PR00775 90kDa heat shock protein signature 122 144 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 PRINTS PR00775 90kDa heat shock protein signature 28 50 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 SUPERFAMILY SSF54211 245 502 7.21E-95 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 184 1.7E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 SUPERFAMILY SSF55874 6 217 2.08E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_06695 0a357494a4bd8033b09856e3335ececa 639 SUPERFAMILY SSF110942 528 638 1.44E-33 T 11-10-2018 IPR037196 HSP90, C-terminal domain AYJ52_05390 6d2240b7ab6b2f53e4996689de1919eb 381 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.1E-125 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AYJ52_05390 6d2240b7ab6b2f53e4996689de1919eb 381 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.283 T 11-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 AYJ52_05390 6d2240b7ab6b2f53e4996689de1919eb 381 SUPERFAMILY SSF51395 5 376 1.28E-99 T 11-10-2018 AYJ52_05390 6d2240b7ab6b2f53e4996689de1919eb 381 Gene3D G3DSA:3.20.20.70 3 380 8.7E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_05390 6d2240b7ab6b2f53e4996689de1919eb 381 PIRSF PIRSF000138 2 380 5.5E-122 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AYJ52_05390 6d2240b7ab6b2f53e4996689de1919eb 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 11-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AYJ52_00815 3c2b8de3be7551ad494abb414b983f00 217 Hamap MF_00013 Octanoyltransferase [lipB]. 7 210 33.429 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AYJ52_00815 3c2b8de3be7551ad494abb414b983f00 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 30 186 1.8E-57 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AYJ52_00815 3c2b8de3be7551ad494abb414b983f00 217 SUPERFAMILY SSF55681 11 205 1.24E-63 T 11-10-2018 AYJ52_00815 3c2b8de3be7551ad494abb414b983f00 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 74 89 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AYJ52_00815 3c2b8de3be7551ad494abb414b983f00 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 65 160 2.1E-9 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AYJ52_00815 3c2b8de3be7551ad494abb414b983f00 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 78 131 4.0E-22 T 11-10-2018 AYJ52_00815 3c2b8de3be7551ad494abb414b983f00 217 Gene3D G3DSA:3.30.930.10 5 206 9.4E-57 T 11-10-2018 AYJ52_00815 3c2b8de3be7551ad494abb414b983f00 217 PIRSF PIRSF016262 4 208 1.0E-57 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AYJ52_14560 8b49b6f88485637042fa3382d987aebc 515 Gene3D G3DSA:1.20.1250.20 267 513 5.7E-16 T 11-10-2018 AYJ52_14560 8b49b6f88485637042fa3382d987aebc 515 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 506 1.5E-112 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AYJ52_14560 8b49b6f88485637042fa3382d987aebc 515 Gene3D G3DSA:1.20.1720.10 19 197 7.7E-34 T 11-10-2018 AYJ52_14560 8b49b6f88485637042fa3382d987aebc 515 Pfam PF07690 Major Facilitator Superfamily 20 417 9.9E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_14560 8b49b6f88485637042fa3382d987aebc 515 SUPERFAMILY SSF103473 8 510 1.96E-59 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_15175 c9153a34c77d2396a4cf3bd046112015 484 Gene3D G3DSA:2.160.20.10 64 336 8.0E-14 T 11-10-2018 IPR012334 Pectin lyase fold AYJ52_15175 c9153a34c77d2396a4cf3bd046112015 484 SUPERFAMILY SSF51126 9 337 5.32E-31 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AYJ52_15175 c9153a34c77d2396a4cf3bd046112015 484 SMART SM00710 157 180 1.3 T 11-10-2018 IPR006626 Parallel beta-helix repeat AYJ52_15175 c9153a34c77d2396a4cf3bd046112015 484 SMART SM00710 312 351 9400.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AYJ52_15175 c9153a34c77d2396a4cf3bd046112015 484 SMART SM00710 192 213 93.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AYJ52_15175 c9153a34c77d2396a4cf3bd046112015 484 SMART SM00710 265 285 5600.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AYJ52_15175 c9153a34c77d2396a4cf3bd046112015 484 SMART SM00710 286 307 110.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AYJ52_15175 c9153a34c77d2396a4cf3bd046112015 484 SMART SM00710 243 263 3700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AYJ52_15175 c9153a34c77d2396a4cf3bd046112015 484 SMART SM00710 135 156 1100.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AYJ52_15175 c9153a34c77d2396a4cf3bd046112015 484 Pfam PF13229 Right handed beta helix region 120 253 1.3E-11 T 11-10-2018 IPR039448 Right handed beta helix domain AYJ52_12605 313297e80df2ea570058850cba1ba202 309 SUPERFAMILY SSF53850 95 304 2.9E-42 T 11-10-2018 AYJ52_12605 313297e80df2ea570058850cba1ba202 309 Gene3D G3DSA:3.40.190.10 98 298 5.6E-64 T 11-10-2018 AYJ52_12605 313297e80df2ea570058850cba1ba202 309 Gene3D G3DSA:3.40.190.10 169 270 5.6E-64 T 11-10-2018 AYJ52_12605 313297e80df2ea570058850cba1ba202 309 SUPERFAMILY SSF46785 10 89 4.36E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12605 313297e80df2ea570058850cba1ba202 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.0E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12605 313297e80df2ea570058850cba1ba202 309 Pfam PF03466 LysR substrate binding domain 95 301 1.3E-39 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12605 313297e80df2ea570058850cba1ba202 309 Gene3D G3DSA:1.10.10.10 8 93 4.7E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15765 7a4c1a9a6f6898cf252a498f9b2df4db 236 SUPERFAMILY SSF53474 7 229 4.29E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15765 7a4c1a9a6f6898cf252a498f9b2df4db 236 Pfam PF00561 alpha/beta hydrolase fold 57 216 3.4E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15765 7a4c1a9a6f6898cf252a498f9b2df4db 236 Gene3D G3DSA:3.40.50.1820 2 231 2.5E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15765 7a4c1a9a6f6898cf252a498f9b2df4db 236 PRINTS PR00111 Alpha/beta hydrolase fold signature 76 89 1.9E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15765 7a4c1a9a6f6898cf252a498f9b2df4db 236 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 75 1.9E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15765 7a4c1a9a6f6898cf252a498f9b2df4db 236 PRINTS PR00111 Alpha/beta hydrolase fold signature 174 188 1.9E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10880 9c894d02c0d1918643a5cf85a2930396 364 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 3.2E-136 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AYJ52_10880 9c894d02c0d1918643a5cf85a2930396 364 Gene3D G3DSA:3.40.630.30 1 272 3.3E-111 T 11-10-2018 AYJ52_10880 9c894d02c0d1918643a5cf85a2930396 364 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 8.8E-148 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AYJ52_10880 9c894d02c0d1918643a5cf85a2930396 364 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 1.1E-131 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AYJ52_10880 9c894d02c0d1918643a5cf85a2930396 364 SUPERFAMILY SSF55729 1 338 1.86E-123 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_08400 27ea3003ef2cf62c68badd151372f173 133 Pfam PF02410 Ribosomal silencing factor during starvation 31 125 3.7E-26 T 11-10-2018 AYJ52_08400 27ea3003ef2cf62c68badd151372f173 133 SUPERFAMILY SSF81301 24 129 1.31E-36 T 11-10-2018 AYJ52_08400 27ea3003ef2cf62c68badd151372f173 133 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 29 125 1.1E-35 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AYJ52_08400 27ea3003ef2cf62c68badd151372f173 133 Gene3D G3DSA:3.30.460.10 18 129 1.1E-36 T 11-10-2018 AYJ52_08400 27ea3003ef2cf62c68badd151372f173 133 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 20 126 24.564 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AYJ52_13785 8c02f9ea3549c734e4c98d417bb94af5 743 Gene3D G3DSA:2.40.170.20 190 742 6.4E-59 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_13785 8c02f9ea3549c734e4c98d417bb94af5 743 Pfam PF00593 TonB dependent receptor 275 742 3.6E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_13785 8c02f9ea3549c734e4c98d417bb94af5 743 SUPERFAMILY SSF56935 55 743 3.11E-94 T 11-10-2018 AYJ52_13785 8c02f9ea3549c734e4c98d417bb94af5 743 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 742 3.5E-68 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_13785 8c02f9ea3549c734e4c98d417bb94af5 743 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 179 5.8E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_13785 8c02f9ea3549c734e4c98d417bb94af5 743 Gene3D G3DSA:2.170.130.10 55 189 2.3E-21 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_12215 2125f3fbcc87e2b19d337bb66e35bde1 319 Pfam PF08223 PaaX-like protein C-terminal domain 189 282 9.8E-24 T 11-10-2018 IPR013225 PaaX-like, C-terminal AYJ52_12215 2125f3fbcc87e2b19d337bb66e35bde1 319 Gene3D G3DSA:1.10.10.10 19 101 2.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12215 2125f3fbcc87e2b19d337bb66e35bde1 319 Gene3D G3DSA:1.20.58.1460 213 288 3.2E-5 T 11-10-2018 AYJ52_12215 2125f3fbcc87e2b19d337bb66e35bde1 319 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 22 305 1.7E-79 T 11-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AYJ52_12215 2125f3fbcc87e2b19d337bb66e35bde1 319 Pfam PF07848 PaaX-like protein 20 87 4.5E-22 T 11-10-2018 IPR012906 PaaX-like, N-terminal AYJ52_12215 2125f3fbcc87e2b19d337bb66e35bde1 319 PIRSF PIRSF020623 1 308 2.9E-93 T 11-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 AYJ52_00330 a961b402386f1fe06a302cb1c068fd72 380 SUPERFAMILY SSF51695 35 371 4.45E-76 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AYJ52_00330 a961b402386f1fe06a302cb1c068fd72 380 Gene3D G3DSA:3.20.20.190 36 372 2.1E-114 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AYJ52_00330 a961b402386f1fe06a302cb1c068fd72 380 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 42 366 2.4E-52 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AYJ52_08565 64634d28ad957e60906b59b240932cc9 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 95 2.3E-43 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AYJ52_08565 64634d28ad957e60906b59b240932cc9 98 Gene3D G3DSA:4.10.520.10 2 97 3.3E-34 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AYJ52_08565 64634d28ad957e60906b59b240932cc9 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 29.567 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AYJ52_08565 64634d28ad957e60906b59b240932cc9 98 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.1E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_08565 64634d28ad957e60906b59b240932cc9 98 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.1E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_08565 64634d28ad957e60906b59b240932cc9 98 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.1E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_08565 64634d28ad957e60906b59b240932cc9 98 SUPERFAMILY SSF47729 4 94 1.47E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AYJ52_08565 64634d28ad957e60906b59b240932cc9 98 Pfam PF00216 Bacterial DNA-binding protein 4 92 3.8E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_08565 64634d28ad957e60906b59b240932cc9 98 SMART SM00411 4 93 4.8E-37 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_08565 64634d28ad957e60906b59b240932cc9 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AYJ52_17730 2ecd5b4bdf7b4221dc66e14c47136fc8 600 SUPERFAMILY SSF53092 8 132 5.06E-10 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AYJ52_17730 2ecd5b4bdf7b4221dc66e14c47136fc8 600 Gene3D G3DSA:3.40.350.10 1 150 4.6E-42 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AYJ52_17730 2ecd5b4bdf7b4221dc66e14c47136fc8 600 Pfam PF00557 Metallopeptidase family M24 312 526 2.0E-44 T 11-10-2018 IPR000994 Peptidase M24 AYJ52_17730 2ecd5b4bdf7b4221dc66e14c47136fc8 600 Pfam PF16189 Creatinase/Prolidase N-terminal domain 152 309 4.4E-38 T 11-10-2018 AYJ52_17730 2ecd5b4bdf7b4221dc66e14c47136fc8 600 SUPERFAMILY SSF55920 307 566 1.44E-53 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AYJ52_17730 2ecd5b4bdf7b4221dc66e14c47136fc8 600 Gene3D G3DSA:3.40.350.10 151 298 1.9E-33 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AYJ52_17730 2ecd5b4bdf7b4221dc66e14c47136fc8 600 Pfam PF16188 C-terminal region of peptidase_M24 541 600 2.4E-22 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain AYJ52_17730 2ecd5b4bdf7b4221dc66e14c47136fc8 600 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 134 2.2E-14 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AYJ52_17730 2ecd5b4bdf7b4221dc66e14c47136fc8 600 Gene3D G3DSA:3.90.230.10 304 600 9.5E-94 T 11-10-2018 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 SUPERFAMILY SSF47203 233 388 9.67E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 PIRSF PIRSF016578 12 390 4.5E-17 T 11-10-2018 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 Gene3D G3DSA:1.10.540.10 2 125 2.2E-46 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 SUPERFAMILY SSF56645 5 247 8.51E-87 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 385 1.1E-39 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 123 7.0E-37 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 Gene3D G3DSA:2.40.110.10 126 239 9.9E-46 T 11-10-2018 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 Gene3D G3DSA:1.20.140.10 240 390 7.5E-45 T 11-10-2018 AYJ52_12440 df8ac8468050e5d34a55d86bd001418f 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 9.6E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_17590 565c91b11f622604d25ff3568772a8f8 275 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 182 200 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_17590 565c91b11f622604d25ff3568772a8f8 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 219 1.3E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_17590 565c91b11f622604d25ff3568772a8f8 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 82 95 1.3E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_17590 565c91b11f622604d25ff3568772a8f8 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 176 188 1.3E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_17590 565c91b11f622604d25ff3568772a8f8 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 105 121 1.3E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_17590 565c91b11f622604d25ff3568772a8f8 275 Pfam PF00557 Metallopeptidase family M24 19 256 5.4E-49 T 11-10-2018 IPR000994 Peptidase M24 AYJ52_17590 565c91b11f622604d25ff3568772a8f8 275 Gene3D G3DSA:3.90.230.10 10 274 1.1E-102 T 11-10-2018 AYJ52_17590 565c91b11f622604d25ff3568772a8f8 275 SUPERFAMILY SSF55920 10 268 1.09E-85 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AYJ52_17590 565c91b11f622604d25ff3568772a8f8 275 Hamap MF_01974 Methionine aminopeptidase [map]. 10 265 40.398 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_17590 565c91b11f622604d25ff3568772a8f8 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 12 264 1.2E-94 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_09795 30d27da812c3e4003de3d69d63d16e41 679 Gene3D G3DSA:3.40.50.300 281 641 1.3E-119 T 11-10-2018 AYJ52_09795 30d27da812c3e4003de3d69d63d16e41 679 SUPERFAMILY SSF52540 5 647 1.51E-156 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09795 30d27da812c3e4003de3d69d63d16e41 679 Pfam PF13361 UvrD-like helicase C-terminal domain 278 622 2.6E-70 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AYJ52_09795 30d27da812c3e4003de3d69d63d16e41 679 Gene3D G3DSA:3.40.50.300 8 273 4.1E-92 T 11-10-2018 AYJ52_09795 30d27da812c3e4003de3d69d63d16e41 679 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 5 678 39.45 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AYJ52_09795 30d27da812c3e4003de3d69d63d16e41 679 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 272 2.8E-71 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AYJ52_09795 30d27da812c3e4003de3d69d63d16e41 679 Gene3D G3DSA:1.10.10.160 112 188 4.1E-92 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AYJ52_09795 30d27da812c3e4003de3d69d63d16e41 679 Gene3D G3DSA:1.10.486.10 384 553 1.3E-119 T 11-10-2018 AYJ52_00110 0503a562426c1e9a7fe41f91dbdc7222 156 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 21 147 4.5E-45 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 AYJ52_00110 0503a562426c1e9a7fe41f91dbdc7222 156 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 4 150 27.625 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 AYJ52_12925 2e1a1395db6d29eb8847de970c4b57b2 476 SUPERFAMILY SSF53383 71 472 2.39E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_12925 2e1a1395db6d29eb8847de970c4b57b2 476 Pfam PF00155 Aminotransferase class I and II 107 468 2.7E-48 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_12925 2e1a1395db6d29eb8847de970c4b57b2 476 Gene3D G3DSA:3.40.640.10 126 367 4.7E-141 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_12925 2e1a1395db6d29eb8847de970c4b57b2 476 Gene3D G3DSA:3.90.1150.10 94 471 4.7E-141 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 Gene3D G3DSA:2.60.40.1730 22 200 6.6E-67 T 11-10-2018 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 Gene3D G3DSA:1.10.1740.60 201 285 1.8E-38 T 11-10-2018 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 Gene3D G3DSA:1.10.390.10 286 449 3.0E-58 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 19 865 1.1E-300 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 SUPERFAMILY SSF55486 211 455 5.49E-71 T 11-10-2018 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 Gene3D G3DSA:2.60.40.1840 450 556 8.0E-24 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 Gene3D G3DSA:1.25.50.10 557 867 3.9E-71 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 Pfam PF01433 Peptidase family M1 domain 214 443 8.8E-54 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 6.1E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 6.1E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 6.1E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 6.1E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 559 866 3.8E-71 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 SUPERFAMILY SSF63737 12 199 2.48E-39 T 11-10-2018 AYJ52_16325 7318e66bd66faac8c1f9d9a8b1fdfb4d 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 450 555 9.2E-22 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AYJ52_19740 e51dd566a57c1c93cd94280dddd3c012 93 SUPERFAMILY SSF47413 33 91 2.82E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_19740 e51dd566a57c1c93cd94280dddd3c012 93 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 4 92 2.0E-37 T 11-10-2018 IPR014057 Uncharacterized protein HI1420 AYJ52_19740 e51dd566a57c1c93cd94280dddd3c012 93 Pfam PF01381 Helix-turn-helix 47 91 2.3E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 Pfam PF04055 Radical SAM superfamily 186 360 3.2E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 SMART SM00729 182 402 6.0E-59 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 Gene3D G3DSA:3.80.30.20 181 416 5.4E-81 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 32 470 1.6E-174 T 11-10-2018 AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 Pfam PF01938 TRAM domain 414 475 1.5E-7 T 11-10-2018 IPR002792 TRAM domain AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 SUPERFAMILY SSF102114 164 408 2.88E-61 T 11-10-2018 AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 31 476 69.223 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 Pfam PF00919 Uncharacterized protein family UPF0004 32 132 1.7E-28 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 Gene3D G3DSA:3.40.50.12160 31 164 4.5E-34 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 186 206 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AYJ52_02415 75d75a8ffb89468e67e8b08af2dad137 483 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 32 470 2.0E-140 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AYJ52_14970 1bf8618a1019a7360172708281af63ea 577 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_14970 1bf8618a1019a7360172708281af63ea 577 Gene3D G3DSA:3.50.30.80 378 532 4.5E-47 T 11-10-2018 AYJ52_14970 1bf8618a1019a7360172708281af63ea 577 Pfam PF00920 Dehydratase family 40 559 3.4E-176 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_14970 1bf8618a1019a7360172708281af63ea 577 SUPERFAMILY SSF143975 6 377 3.14E-123 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AYJ52_14970 1bf8618a1019a7360172708281af63ea 577 SUPERFAMILY SSF52016 378 564 1.49E-55 T 11-10-2018 AYJ52_17670 79ba76429f4ed7456f7eea0cf0372ffd 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 240 7.7E-62 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AYJ52_17670 79ba76429f4ed7456f7eea0cf0372ffd 252 SUPERFAMILY SSF102705 1 251 3.66E-77 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AYJ52_17670 79ba76429f4ed7456f7eea0cf0372ffd 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 250 3.3E-61 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AYJ52_17670 79ba76429f4ed7456f7eea0cf0372ffd 252 Gene3D G3DSA:3.40.1390.30 7 239 1.5E-81 T 11-10-2018 AYJ52_17670 79ba76429f4ed7456f7eea0cf0372ffd 252 Gene3D G3DSA:3.40.1390.30 98 223 1.5E-81 T 11-10-2018 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 Pfam PF00154 recA bacterial DNA recombination protein 7 267 2.8E-148 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 SUPERFAMILY SSF54752 269 325 1.11E-19 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 SUPERFAMILY SSF52540 4 266 3.32E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 ProSitePatterns PS00321 recA signature. 213 221 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 PRINTS PR00142 RecA protein signature 297 314 5.1E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 PRINTS PR00142 RecA protein signature 210 238 5.1E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 PRINTS PR00142 RecA protein signature 165 194 5.1E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 PRINTS PR00142 RecA protein signature 243 272 5.1E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 PRINTS PR00142 RecA protein signature 93 122 5.1E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 PRINTS PR00142 RecA protein signature 127 156 5.1E-82 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 Gene3D G3DSA:3.40.50.300 26 267 6.8E-85 T 11-10-2018 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 4.3E-171 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 Hamap MF_00268 Protein RecA [recA]. 5 329 51.636 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 Gene3D G3DSA:3.30.250.10 269 327 3.1E-24 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AYJ52_15630 766ed99dcc673dce449414cb88be40c6 348 SMART SM00382 57 228 5.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_00470 e15be1368aea63209e5203b2c02e7cd2 528 Gene3D G3DSA:3.40.33.10 140 399 4.3E-6 T 11-10-2018 IPR035940 CAP superfamily AYJ52_00470 e15be1368aea63209e5203b2c02e7cd2 528 Pfam PF00188 Cysteine-rich secretory protein family 273 391 2.4E-4 T 11-10-2018 IPR014044 CAP domain AYJ52_00470 e15be1368aea63209e5203b2c02e7cd2 528 SUPERFAMILY SSF55797 265 380 3.4E-7 T 11-10-2018 IPR035940 CAP superfamily AYJ52_10835 5926d9bcd38fa578403d9961d2aec76e 431 Pfam PF00324 Amino acid permease 1 399 2.1E-108 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_10835 5926d9bcd38fa578403d9961d2aec76e 431 PIRSF PIRSF006060 1 431 1.8E-71 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_10835 5926d9bcd38fa578403d9961d2aec76e 431 ProSitePatterns PS00218 Amino acid permeases signature. 20 50 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_10835 5926d9bcd38fa578403d9961d2aec76e 431 Gene3D G3DSA:1.20.1740.10 1 431 2.6E-58 T 11-10-2018 AYJ52_00275 70b619115a9de146fbedb73abd5f9922 292 Pfam PF03180 NLPA lipoprotein 46 281 1.2E-61 T 11-10-2018 IPR004872 Lipoprotein NlpA family AYJ52_00275 70b619115a9de146fbedb73abd5f9922 292 Gene3D G3DSA:3.40.190.10 121 232 3.0E-72 T 11-10-2018 AYJ52_00275 70b619115a9de146fbedb73abd5f9922 292 Gene3D G3DSA:3.40.190.10 46 273 3.0E-72 T 11-10-2018 AYJ52_00275 70b619115a9de146fbedb73abd5f9922 292 SUPERFAMILY SSF53850 41 282 2.72E-63 T 11-10-2018 AYJ52_08505 82a264d7f7bba9ca67fb60cd12716bd5 137 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 42 5.8E-15 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AYJ52_08505 82a264d7f7bba9ca67fb60cd12716bd5 137 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 49 134 7.1E-37 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AYJ52_08505 82a264d7f7bba9ca67fb60cd12716bd5 137 SUPERFAMILY SSF55200 49 137 1.31E-32 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AYJ52_08505 82a264d7f7bba9ca67fb60cd12716bd5 137 Gene3D G3DSA:3.30.110.10 42 137 3.5E-37 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AYJ52_08505 82a264d7f7bba9ca67fb60cd12716bd5 137 SUPERFAMILY SSF54364 2 44 2.88E-15 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AYJ52_08505 82a264d7f7bba9ca67fb60cd12716bd5 137 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 136 6.2E-54 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AYJ52_08505 82a264d7f7bba9ca67fb60cd12716bd5 137 Gene3D G3DSA:3.10.20.80 1 41 2.6E-15 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AYJ52_03260 dc2cfbb2d0c96b059f107449ae37338c 213 Pfam PF05137 Fimbrial assembly protein (PilN) 100 170 7.1E-18 T 11-10-2018 IPR007813 Fimbrial assembly PilN AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 Gene3D G3DSA:3.40.50.720 2 272 2.1E-68 T 11-10-2018 AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 3.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 SUPERFAMILY SSF51735 3 241 3.29E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 Pfam PF00106 short chain dehydrogenase 3 200 3.3E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08395 7d8b94fdce0ae162af3bb30b6a494668 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.9E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_06465 473eb6303c2fbcd30aad626c1d2c262b 178 Gene3D G3DSA:1.20.120.910 48 177 1.6E-35 T 11-10-2018 AYJ52_06465 473eb6303c2fbcd30aad626c1d2c262b 178 PRINTS PR00618 DksA/TraR zinc finger signature 153 165 8.7E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AYJ52_06465 473eb6303c2fbcd30aad626c1d2c262b 178 PRINTS PR00618 DksA/TraR zinc finger signature 141 152 8.7E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AYJ52_06465 473eb6303c2fbcd30aad626c1d2c262b 178 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 59 167 1.5E-50 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AYJ52_06465 473eb6303c2fbcd30aad626c1d2c262b 178 SUPERFAMILY SSF109635 42 136 5.49E-34 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily AYJ52_06465 473eb6303c2fbcd30aad626c1d2c262b 178 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 137 170 1.2E-11 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AYJ52_06465 473eb6303c2fbcd30aad626c1d2c262b 178 SUPERFAMILY SSF57716 138 175 3.28E-10 T 11-10-2018 AYJ52_06465 473eb6303c2fbcd30aad626c1d2c262b 178 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 141 165 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AYJ52_06465 473eb6303c2fbcd30aad626c1d2c262b 178 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 55 177 28.855 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AYJ52_14140 522b5745c38c8b8e069df6e31408714f 234 Pfam PF01144 Coenzyme A transferase 6 217 1.3E-76 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_14140 522b5745c38c8b8e069df6e31408714f 234 Gene3D G3DSA:3.40.1080.10 1 227 4.4E-95 T 11-10-2018 AYJ52_14140 522b5745c38c8b8e069df6e31408714f 234 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AYJ52_14140 522b5745c38c8b8e069df6e31408714f 234 SUPERFAMILY SSF100950 2 226 4.88E-85 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_14140 522b5745c38c8b8e069df6e31408714f 234 SMART SM00882 5 217 1.1E-87 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_14140 522b5745c38c8b8e069df6e31408714f 234 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 217 1.5E-76 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AYJ52_11260 1ce319b583cc7a17094670889e71446c 208 Gene3D G3DSA:3.40.30.10 1 83 4.1E-33 T 11-10-2018 AYJ52_11260 1ce319b583cc7a17094670889e71446c 208 SUPERFAMILY SSF52833 1 85 5.04E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_11260 1ce319b583cc7a17094670889e71446c 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 75 1.8E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_11260 1ce319b583cc7a17094670889e71446c 208 Gene3D G3DSA:1.20.1050.10 85 203 5.1E-40 T 11-10-2018 AYJ52_11260 1ce319b583cc7a17094670889e71446c 208 SUPERFAMILY SSF47616 79 202 8.21E-22 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_13335 8d2957b4980dd396808e041fdca9294c 615 Pfam PF00005 ABC transporter 377 530 4.1E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_13335 8d2957b4980dd396808e041fdca9294c 615 Gene3D G3DSA:1.20.1560.10 24 347 2.3E-24 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_13335 8d2957b4980dd396808e041fdca9294c 615 ProSitePatterns PS00211 ABC transporters family signature. 502 516 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_13335 8d2957b4980dd396808e041fdca9294c 615 SUPERFAMILY SSF52540 350 600 2.25E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13335 8d2957b4980dd396808e041fdca9294c 615 SUPERFAMILY SSF90123 20 339 3.66E-46 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_13335 8d2957b4980dd396808e041fdca9294c 615 SMART SM00382 385 576 5.4E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_13335 8d2957b4980dd396808e041fdca9294c 615 Gene3D G3DSA:3.40.50.300 351 604 1.9E-87 T 11-10-2018 AYJ52_13335 8d2957b4980dd396808e041fdca9294c 615 Pfam PF00664 ABC transporter transmembrane region 41 307 3.3E-12 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AYJ52_12460 ffecef11bf2442d901c125c2ff20c040 428 Gene3D G3DSA:2.40.160.10 217 428 2.7E-8 T 11-10-2018 IPR023614 Porin domain superfamily AYJ52_12460 ffecef11bf2442d901c125c2ff20c040 428 SUPERFAMILY SSF56935 83 421 2.93E-29 T 11-10-2018 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 Gene3D G3DSA:3.30.1490.20 21 105 4.6E-89 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 Pfam PF08442 ATP-grasp domain 2 203 3.6E-78 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 Gene3D G3DSA:3.40.50.261 241 388 8.3E-55 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 SUPERFAMILY SSF52210 240 386 7.72E-53 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 42.961 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 SUPERFAMILY SSF56059 1 239 2.16E-79 T 11-10-2018 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 258 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 Gene3D G3DSA:3.30.470.20 1 235 4.6E-89 T 11-10-2018 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 PIRSF PIRSF001554 1 388 3.4E-149 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 Pfam PF00549 CoA-ligase 263 383 8.3E-25 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AYJ52_00730 08b9646f7632895f3e2e75a0178747ca 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 386 5.0E-160 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_01445 d015d06ed711b5df70b3d367cd933778 293 SUPERFAMILY SSF53474 6 286 5.88E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_01445 d015d06ed711b5df70b3d367cd933778 293 Gene3D G3DSA:3.40.50.1820 185 290 1.8E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_01445 d015d06ed711b5df70b3d367cd933778 293 Pfam PF00561 alpha/beta hydrolase fold 36 162 2.5E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_01445 d015d06ed711b5df70b3d367cd933778 293 Gene3D G3DSA:3.40.50.1820 2 181 5.0E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10180 3523119ad387d16920dc57b641ea2ad8 309 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 153 266 5.3E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AYJ52_10180 3523119ad387d16920dc57b641ea2ad8 309 SUPERFAMILY SSF54593 1 281 5.58E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_10180 3523119ad387d16920dc57b641ea2ad8 309 Gene3D G3DSA:3.10.180.10 2 120 4.8E-5 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_10180 3523119ad387d16920dc57b641ea2ad8 309 Gene3D G3DSA:3.10.180.10 147 294 3.7E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 SUPERFAMILY SSF82693 565 664 1.78E-23 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 Gene3D G3DSA:3.30.70.1430 39 812 0.0 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 SUPERFAMILY SSF82866 297 498 1.57E-51 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 SUPERFAMILY SSF82693 39 130 1.31E-23 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 SUPERFAMILY SSF82714 184 273 1.7E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 SUPERFAMILY SSF82866 803 1022 4.45E-42 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 Gene3D G3DSA:1.20.1640.10 513 1017 0.0 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1031 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 Gene3D G3DSA:3.30.70.1430 567 663 0.0 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 Gene3D G3DSA:3.30.70.1440 664 860 0.0 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 7.0E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.0E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 7.0E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 7.0E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 7.0E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 7.0E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 7.0E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 7.0E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 7.0E-96 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 SUPERFAMILY SSF82693 136 330 2.49E-26 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 SUPERFAMILY SSF82714 720 801 4.71E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 Pfam PF00873 AcrB/AcrD/AcrF family 2 1020 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 11-10-2018 AYJ52_19580 2b59c81cfb085ca7a412fd7d2fc7582d 1036 Gene3D G3DSA:3.30.2090.10 716 804 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_14735 8df82d3cae175cc9363422a24f18ff92 2199 SMART SM00912 98 217 9.5E-34 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AYJ52_14735 8df82d3cae175cc9363422a24f18ff92 2199 Pfam PF08808 RES domain 2046 2180 2.7E-7 T 11-10-2018 IPR014914 RES domain AYJ52_14735 8df82d3cae175cc9363422a24f18ff92 2199 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 1.6E-7 T 11-10-2018 IPR024973 ESPR domain AYJ52_14735 8df82d3cae175cc9363422a24f18ff92 2199 Gene3D G3DSA:2.160.20.10 91 386 1.3E-86 T 11-10-2018 IPR012334 Pectin lyase fold AYJ52_14735 8df82d3cae175cc9363422a24f18ff92 2199 Pfam PF04829 Pre-toxin domain with VENN motif 1824 1867 1.6E-6 T 11-10-2018 IPR006914 VENN motif-containing domain AYJ52_14735 8df82d3cae175cc9363422a24f18ff92 2199 Pfam PF05860 haemagglutination activity domain 90 216 1.1E-23 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AYJ52_14735 8df82d3cae175cc9363422a24f18ff92 2199 SUPERFAMILY SSF51126 98 410 3.14E-40 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AYJ52_14735 8df82d3cae175cc9363422a24f18ff92 2199 Pfam PF04830 Possible hemagglutinin (DUF637) 1645 1804 1.2E-27 T 11-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative AYJ52_14735 8df82d3cae175cc9363422a24f18ff92 2199 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 115 212 9.2E-19 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal AYJ52_01585 816bcac9c686c8abe992b4bdcda81c34 274 Pfam PF08238 Sel1 repeat 97 131 9.8 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_01585 816bcac9c686c8abe992b4bdcda81c34 274 Pfam PF08238 Sel1 repeat 209 240 8.6 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_01585 816bcac9c686c8abe992b4bdcda81c34 274 Pfam PF08238 Sel1 repeat 60 95 1.2E-5 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_01585 816bcac9c686c8abe992b4bdcda81c34 274 Gene3D G3DSA:1.25.40.10 24 270 1.0E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_01585 816bcac9c686c8abe992b4bdcda81c34 274 SUPERFAMILY SSF81901 32 249 1.13E-24 T 11-10-2018 AYJ52_01585 816bcac9c686c8abe992b4bdcda81c34 274 SMART SM00671 96 132 5.0E-4 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_01585 816bcac9c686c8abe992b4bdcda81c34 274 SMART SM00671 60 95 1.2E-6 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_01585 816bcac9c686c8abe992b4bdcda81c34 274 SMART SM00671 207 242 0.083 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_01630 8af33a611f22fa0121cc07922760b134 143 Gene3D G3DSA:1.10.1200.120 3 143 2.7E-41 T 11-10-2018 IPR036019 Gated mechanosensitive channel AYJ52_01630 8af33a611f22fa0121cc07922760b134 143 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 140 9.7E-44 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AYJ52_01630 8af33a611f22fa0121cc07922760b134 143 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 142 1.1E-36 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AYJ52_01630 8af33a611f22fa0121cc07922760b134 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 5.2E-11 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AYJ52_01630 8af33a611f22fa0121cc07922760b134 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 5.2E-11 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AYJ52_01630 8af33a611f22fa0121cc07922760b134 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 5.2E-11 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AYJ52_01630 8af33a611f22fa0121cc07922760b134 143 SUPERFAMILY SSF81330 12 136 2.88E-34 T 11-10-2018 IPR036019 Gated mechanosensitive channel AYJ52_01630 8af33a611f22fa0121cc07922760b134 143 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site AYJ52_01630 8af33a611f22fa0121cc07922760b134 143 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 141 23.559 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AYJ52_04215 c07fb1e365f772d1ca05128539667671 116 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 101 7.8E-8 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AYJ52_04215 c07fb1e365f772d1ca05128539667671 116 SUPERFAMILY SSF69754 1 95 1.44E-10 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AYJ52_04215 c07fb1e365f772d1ca05128539667671 116 Gene3D G3DSA:3.30.160.100 1 103 3.0E-6 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AYJ52_14260 58d0ebe33fc12b76e615a4e8f3889dd9 206 Gene3D G3DSA:3.40.50.300 3 206 4.7E-51 T 11-10-2018 AYJ52_14260 58d0ebe33fc12b76e615a4e8f3889dd9 206 SMART SM00382 23 200 1.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_14260 58d0ebe33fc12b76e615a4e8f3889dd9 206 SUPERFAMILY SSF52540 14 205 1.18E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_14260 58d0ebe33fc12b76e615a4e8f3889dd9 206 Pfam PF00005 ABC transporter 25 160 7.6E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_14260 58d0ebe33fc12b76e615a4e8f3889dd9 206 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_15565 f49b3e23f1451f65513c233222fb47af 479 TIGRFAM TIGR03606 non_repeat_PQQ: dehydrogenase, PQQ-dependent, s-GDH family 23 479 6.4E-248 T 11-10-2018 IPR019893 PQQ-dependent dehydrogenase, s-GDH family KEGG: 00030+1.1.5.2|MetaCyc: PWY-7165 AYJ52_15565 f49b3e23f1451f65513c233222fb47af 479 SUPERFAMILY SSF50952 27 455 3.01E-62 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AYJ52_15565 f49b3e23f1451f65513c233222fb47af 479 Gene3D G3DSA:2.120.10.30 26 479 2.6E-192 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AYJ52_15565 f49b3e23f1451f65513c233222fb47af 479 Pfam PF07995 Glucose / Sorbosone dehydrogenase 369 452 2.6E-9 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AYJ52_15565 f49b3e23f1451f65513c233222fb47af 479 Pfam PF07995 Glucose / Sorbosone dehydrogenase 51 304 7.4E-55 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AYJ52_18095 a447989270a39dfebe9258e4eaf714dd 308 Pfam PF05144 Phage replication protein CRI 53 223 4.4E-25 T 11-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 AYJ52_18095 a447989270a39dfebe9258e4eaf714dd 308 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 50 243 5.1E-23 T 11-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 AYJ52_10625 5ceb57f09ba8b09ce7409614268adbf8 410 Gene3D G3DSA:3.50.50.60 6 347 2.0E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10625 5ceb57f09ba8b09ce7409614268adbf8 410 Gene3D G3DSA:3.30.9.50 80 279 2.0E-92 T 11-10-2018 AYJ52_10625 5ceb57f09ba8b09ce7409614268adbf8 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 4.2E-20 T 11-10-2018 AYJ52_10625 5ceb57f09ba8b09ce7409614268adbf8 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 4.2E-20 T 11-10-2018 AYJ52_10625 5ceb57f09ba8b09ce7409614268adbf8 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.2E-20 T 11-10-2018 AYJ52_10625 5ceb57f09ba8b09ce7409614268adbf8 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 321 4.2E-20 T 11-10-2018 AYJ52_10625 5ceb57f09ba8b09ce7409614268adbf8 410 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 398 9.5E-103 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AYJ52_10625 5ceb57f09ba8b09ce7409614268adbf8 410 SUPERFAMILY SSF51905 6 394 9.55E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10625 5ceb57f09ba8b09ce7409614268adbf8 410 Pfam PF01494 FAD binding domain 6 353 3.1E-33 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AYJ52_10625 5ceb57f09ba8b09ce7409614268adbf8 410 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 304 317 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AYJ52_06795 8db8e613da878182ea40c0c7e8a4ac3f 257 Gene3D G3DSA:3.30.450.40 76 243 1.1E-22 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_06795 8db8e613da878182ea40c0c7e8a4ac3f 257 SMART SM00346 3 94 0.0023 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_06795 8db8e613da878182ea40c0c7e8a4ac3f 257 SUPERFAMILY SSF55781 80 247 8.5E-27 T 11-10-2018 AYJ52_06795 8db8e613da878182ea40c0c7e8a4ac3f 257 Pfam PF01614 Bacterial transcriptional regulator 129 246 5.6E-12 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AYJ52_06795 8db8e613da878182ea40c0c7e8a4ac3f 257 SUPERFAMILY SSF46785 3 74 1.06E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_06795 8db8e613da878182ea40c0c7e8a4ac3f 257 Gene3D G3DSA:1.10.10.10 2 75 3.0E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_04185 372b73f9f43bba78d5a2322820d9d0c7 145 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 143 1.1E-26 T 11-10-2018 IPR019223 Domain of unknown function DUF2147 AYJ52_04185 372b73f9f43bba78d5a2322820d9d0c7 145 Gene3D G3DSA:2.40.128.520 22 145 2.0E-19 T 11-10-2018 AYJ52_17645 da4a5533b1f9de178f1b903169f185d7 240 SUPERFAMILY SSF88697 1 68 2.36E-17 T 11-10-2018 IPR015947 PUA-like superfamily AYJ52_17645 da4a5533b1f9de178f1b903169f185d7 240 SUPERFAMILY SSF75217 73 236 4.8E-47 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AYJ52_17645 da4a5533b1f9de178f1b903169f185d7 240 Gene3D G3DSA:2.40.240.20 1 66 1.1E-19 T 11-10-2018 AYJ52_17645 da4a5533b1f9de178f1b903169f185d7 240 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 237 2.2E-59 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AYJ52_17645 da4a5533b1f9de178f1b903169f185d7 240 PIRSF PIRSF015601 1 240 1.6E-60 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AYJ52_17645 da4a5533b1f9de178f1b903169f185d7 240 Gene3D G3DSA:3.40.1280.10 72 240 1.3E-51 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ52_17645 da4a5533b1f9de178f1b903169f185d7 240 Pfam PF04452 RNA methyltransferase 17 235 3.3E-69 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AYJ52_07755 d39ba204aa20c518079194046163170c 469 Gene3D G3DSA:3.40.50.300 171 350 7.4E-49 T 11-10-2018 AYJ52_07755 d39ba204aa20c518079194046163170c 469 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 432 1.4E-26 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AYJ52_07755 d39ba204aa20c518079194046163170c 469 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 432 2.1E-179 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AYJ52_07755 d39ba204aa20c518079194046163170c 469 SUPERFAMILY SSF52540 4 168 1.7E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07755 d39ba204aa20c518079194046163170c 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_07755 d39ba204aa20c518079194046163170c 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_07755 d39ba204aa20c518079194046163170c 469 Gene3D G3DSA:3.40.50.300 1 160 1.9E-43 T 11-10-2018 AYJ52_07755 d39ba204aa20c518079194046163170c 469 Hamap MF_00195 GTPase Der [der]. 2 435 38.217 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AYJ52_07755 d39ba204aa20c518079194046163170c 469 PIRSF PIRSF006485 1 440 3.7E-174 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AYJ52_07755 d39ba204aa20c518079194046163170c 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 134 4.6E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_07755 d39ba204aa20c518079194046163170c 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 337 1.9E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_07755 d39ba204aa20c518079194046163170c 469 Pfam PF01926 50S ribosome-binding GTPase 179 296 9.4E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_07755 d39ba204aa20c518079194046163170c 469 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.6E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_07755 d39ba204aa20c518079194046163170c 469 Gene3D G3DSA:3.30.300.20 352 434 2.6E-20 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_07755 d39ba204aa20c518079194046163170c 469 SUPERFAMILY SSF52540 137 438 4.63E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16080 331b9b0cede487224bf3a278cc891718 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 4.3E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_16080 331b9b0cede487224bf3a278cc891718 192 SUPERFAMILY SSF46689 4 69 7.7E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_16080 331b9b0cede487224bf3a278cc891718 192 Gene3D G3DSA:1.10.357.10 6 192 2.0E-28 T 11-10-2018 AYJ52_16080 331b9b0cede487224bf3a278cc891718 192 SUPERFAMILY SSF48498 84 190 4.45E-16 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_16545 353257efbc92d02457b6958d8623cccb 474 SUPERFAMILY SSF55931 150 472 4.58E-86 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AYJ52_16545 353257efbc92d02457b6958d8623cccb 474 Gene3D G3DSA:3.30.590.10 147 473 2.9E-87 T 11-10-2018 AYJ52_16545 353257efbc92d02457b6958d8623cccb 474 Pfam PF00120 Glutamine synthetase, catalytic domain 151 471 6.4E-85 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AYJ52_16545 353257efbc92d02457b6958d8623cccb 474 SMART SM01230 149 395 7.5E-77 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AYJ52_18805 7c67250929256024b74b9c9fafcb9735 232 TIGRFAM TIGR02796 tolQ: protein TolQ 11 222 6.2E-83 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AYJ52_18805 7c67250929256024b74b9c9fafcb9735 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 9 227 38.749 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AYJ52_18805 7c67250929256024b74b9c9fafcb9735 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 4.0E-39 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AYJ52_14765 7fdb4ea54482dcdc88e2b2605bfeb8b2 439 Pfam PF07690 Major Facilitator Superfamily 28 383 7.5E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_14765 7fdb4ea54482dcdc88e2b2605bfeb8b2 439 Gene3D G3DSA:1.20.1250.20 5 431 9.0E-75 T 11-10-2018 AYJ52_14765 7fdb4ea54482dcdc88e2b2605bfeb8b2 439 SUPERFAMILY SSF103473 7 428 2.62E-79 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_17945 31ef43221d2e279305b5ce4bca01f7f4 143 Pfam PF07681 DoxX 23 101 3.3E-13 T 11-10-2018 IPR032808 DoxX family AYJ52_14965 009ecd458e783c12f15898a6e9966a35 434 SUPERFAMILY SSF103473 9 422 2.09E-83 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_14965 009ecd458e783c12f15898a6e9966a35 434 Gene3D G3DSA:1.20.1250.20 2 430 1.1E-76 T 11-10-2018 AYJ52_14965 009ecd458e783c12f15898a6e9966a35 434 Pfam PF07690 Major Facilitator Superfamily 20 382 2.3E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 SUPERFAMILY SSF52540 5 416 4.97E-143 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 SMART SM00490 461 547 3.1E-21 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 Gene3D G3DSA:3.40.50.300 416 590 1.6E-49 T 11-10-2018 AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 Pfam PF04851 Type III restriction enzyme, res subunit 17 89 4.1E-11 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 SMART SM00487 11 427 9.3E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 7 668 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 Pfam PF12344 Ultra-violet resistance protein B 553 594 2.0E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 SUPERFAMILY SSF46600 634 672 3.53E-11 T 11-10-2018 IPR036876 UVR domain superfamily AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 Gene3D G3DSA:4.10.860.10 615 673 8.3E-10 T 11-10-2018 AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 SUPERFAMILY SSF52540 35 586 9.24E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 5 670 43.371 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 Gene3D G3DSA:3.40.50.300 1 238 1.3E-76 T 11-10-2018 AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 Gene3D G3DSA:3.40.50.300 268 415 1.7E-52 T 11-10-2018 AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 Pfam PF02151 UvrB/uvrC motif 638 670 3.9E-10 T 11-10-2018 IPR001943 UVR domain GO:0005515 AYJ52_18540 f1363a1fb5284e0334edcbf30dabe51f 673 Pfam PF00271 Helicase conserved C-terminal domain 442 545 5.4E-18 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_14300 6e8fc2ea7ef34e387e73619aa19c09a9 252 SUPERFAMILY SSF48613 8 251 3.34E-73 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_14300 6e8fc2ea7ef34e387e73619aa19c09a9 252 Pfam PF03070 TENA/THI-4/PQQC family 22 224 1.8E-61 T 11-10-2018 IPR004305 Thiaminase-2/PQQC AYJ52_14300 6e8fc2ea7ef34e387e73619aa19c09a9 252 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 252 129.297 T 11-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AYJ52_14300 6e8fc2ea7ef34e387e73619aa19c09a9 252 Gene3D G3DSA:1.20.910.10 4 251 1.0E-72 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_14300 6e8fc2ea7ef34e387e73619aa19c09a9 252 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 8 243 6.2E-129 T 11-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AYJ52_16830 adedf1326ff8f4221886a7fa86e9f5f5 243 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 174 243 3.7E-22 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AYJ52_16830 adedf1326ff8f4221886a7fa86e9f5f5 243 SUPERFAMILY SSF56281 4 243 2.62E-66 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_16830 adedf1326ff8f4221886a7fa86e9f5f5 243 SMART SM00849 15 173 1.3E-34 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_16830 adedf1326ff8f4221886a7fa86e9f5f5 243 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 10 235 1.7E-95 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AYJ52_16830 adedf1326ff8f4221886a7fa86e9f5f5 243 Gene3D G3DSA:3.60.15.10 5 243 1.7E-81 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_16830 adedf1326ff8f4221886a7fa86e9f5f5 243 Pfam PF00753 Metallo-beta-lactamase superfamily 48 173 3.2E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_16830 adedf1326ff8f4221886a7fa86e9f5f5 243 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 5 243 40.725 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AYJ52_16830 adedf1326ff8f4221886a7fa86e9f5f5 243 PIRSF PIRSF005457 1 243 1.2E-96 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AYJ52_16400 afa8ca551a5362c20269ead770492d10 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AYJ52_16400 afa8ca551a5362c20269ead770492d10 169 PIRSF PIRSF001467 1 169 2.7E-28 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AYJ52_16400 afa8ca551a5362c20269ead770492d10 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 4.0E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AYJ52_16400 afa8ca551a5362c20269ead770492d10 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 4.0E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AYJ52_16400 afa8ca551a5362c20269ead770492d10 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 4.0E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AYJ52_16400 afa8ca551a5362c20269ead770492d10 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 165 5.9E-50 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AYJ52_16400 afa8ca551a5362c20269ead770492d10 169 SUPERFAMILY SSF50891 6 167 9.64E-59 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AYJ52_16400 afa8ca551a5362c20269ead770492d10 169 Gene3D G3DSA:2.40.100.10 3 167 9.3E-67 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AYJ52_09155 18e6801440ae677275d8b2171582af17 443 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 345 427 1.4E-24 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 SUPERFAMILY SSF142984 254 337 2.88E-21 T 11-10-2018 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 429 1.9E-178 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 Gene3D G3DSA:3.10.20.600 245 339 2.4E-28 T 11-10-2018 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 SUPERFAMILY SSF142019 27 245 3.14E-85 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 Gene3D G3DSA:1.20.1440.230 340 441 3.7E-26 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 59 230 8.3E-50 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 Gene3D G3DSA:3.40.50.11540 64 241 1.4E-78 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 SUPERFAMILY SSF140490 339 432 2.22E-30 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 SMART SM00928 342 387 8.8E-21 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 355 366 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 Pfam PF10531 SLBB domain 259 304 1.0E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09155 18e6801440ae677275d8b2171582af17 443 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 178 193 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_07010 473aa3c68c6549287194c12ba6fa6577 583 Gene3D G3DSA:3.40.50.300 124 304 4.6E-37 T 11-10-2018 AYJ52_07010 473aa3c68c6549287194c12ba6fa6577 583 Gene3D G3DSA:3.40.50.300 447 567 1.4E-22 T 11-10-2018 AYJ52_07010 473aa3c68c6549287194c12ba6fa6577 583 Gene3D G3DSA:3.40.50.300 312 446 2.6E-13 T 11-10-2018 AYJ52_07010 473aa3c68c6549287194c12ba6fa6577 583 SMART SM00382 138 305 0.0037 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_07010 473aa3c68c6549287194c12ba6fa6577 583 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 58 578 5.9E-123 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AYJ52_07010 473aa3c68c6549287194c12ba6fa6577 583 SUPERFAMILY SSF52540 126 558 7.59E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07010 473aa3c68c6549287194c12ba6fa6577 583 Pfam PF13538 UvrD-like helicase C-terminal domain 507 552 1.2E-12 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain AYJ52_07010 473aa3c68c6549287194c12ba6fa6577 583 Pfam PF13604 AAA domain 126 326 4.0E-33 T 11-10-2018 AYJ52_07010 473aa3c68c6549287194c12ba6fa6577 583 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 21 576 40.752 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AYJ52_03060 80479b60f38cca06b593b4f00698596c 294 Pfam PF00892 EamA-like transporter family 146 276 2.5E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_03060 80479b60f38cca06b593b4f00698596c 294 Pfam PF00892 EamA-like transporter family 15 134 4.6E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_03060 80479b60f38cca06b593b4f00698596c 294 SUPERFAMILY SSF103481 182 279 1.44E-9 T 11-10-2018 AYJ52_14540 7bc08994ce25a29eeafba8e7693f8ed9 387 SUPERFAMILY SSF55729 11 141 3.04E-7 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_14540 7bc08994ce25a29eeafba8e7693f8ed9 387 Gene3D G3DSA:3.40.630.30 9 143 6.9E-5 T 11-10-2018 AYJ52_14855 e1c57df28ab84d0943a4ac1c743f3ef9 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 83 1.0E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_14855 e1c57df28ab84d0943a4ac1c743f3ef9 209 Gene3D G3DSA:1.10.357.10 15 203 1.3E-18 T 11-10-2018 AYJ52_14855 e1c57df28ab84d0943a4ac1c743f3ef9 209 SUPERFAMILY SSF46689 31 99 5.64E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14855 e1c57df28ab84d0943a4ac1c743f3ef9 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 52 3.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_14855 e1c57df28ab84d0943a4ac1c743f3ef9 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 60 83 3.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_01535 209fa0a14f543511722e81505eb48621 195 SUPERFAMILY SSF55469 10 194 5.37E-45 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_01535 209fa0a14f543511722e81505eb48621 195 Pfam PF00881 Nitroreductase family 17 173 3.4E-18 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AYJ52_01535 209fa0a14f543511722e81505eb48621 195 Gene3D G3DSA:3.40.109.10 4 195 3.4E-32 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_01535 209fa0a14f543511722e81505eb48621 195 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 1 195 42.847 T 11-10-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 AYJ52_00615 22ab669975d06ccc258d81bff10f0474 107 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 6 94 5.8E-24 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AYJ52_00615 22ab669975d06ccc258d81bff10f0474 107 Gene3D G3DSA:3.30.110.60 2 105 2.0E-30 T 11-10-2018 IPR035920 YhbY-like superfamily AYJ52_00615 22ab669975d06ccc258d81bff10f0474 107 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 86 4.0E-28 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AYJ52_00615 22ab669975d06ccc258d81bff10f0474 107 SMART SM01103 4 87 1.5E-36 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AYJ52_00615 22ab669975d06ccc258d81bff10f0474 107 SUPERFAMILY SSF75471 4 97 1.12E-26 T 11-10-2018 IPR035920 YhbY-like superfamily AYJ52_00615 22ab669975d06ccc258d81bff10f0474 107 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 87 2.3E-19 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AYJ52_17100 ff0ea8d93e11e35fc9aa9c814621181d 383 Pfam PF00561 alpha/beta hydrolase fold 97 361 4.0E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_17100 ff0ea8d93e11e35fc9aa9c814621181d 383 Gene3D G3DSA:3.40.50.1820 60 380 5.7E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17100 ff0ea8d93e11e35fc9aa9c814621181d 383 SUPERFAMILY SSF53474 62 378 5.55E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 413 52.607 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 SMART SM01086 315 409 1.6E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 SUPERFAMILY SSF57716 9 44 1.71E-10 T 11-10-2018 AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 390 2.0E-14 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 Gene3D G3DSA:3.40.50.300 53 313 4.0E-111 T 11-10-2018 AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 SMART SM00994 8 47 1.4E-19 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 Gene3D G3DSA:1.10.8.60 314 422 6.5E-39 T 11-10-2018 AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 407 7.8E-205 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 SUPERFAMILY SSF52540 58 400 2.46E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 309 3.1E-51 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 SMART SM00382 110 331 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 Gene3D G3DSA:3.30.50.30 2 47 9.4E-17 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily AYJ52_07620 35f13aaf1354220f4126a1960675664a 437 Pfam PF06689 ClpX C4-type zinc finger 9 45 1.8E-17 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AYJ52_17615 7f6aeb6b759e7f11d03a51e706dee296 337 Pfam PF04055 Radical SAM superfamily 88 249 2.7E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_17615 7f6aeb6b759e7f11d03a51e706dee296 337 TIGRFAM TIGR00510 lipA: lipoyl synthase 31 311 9.4E-122 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AYJ52_17615 7f6aeb6b759e7f11d03a51e706dee296 337 Gene3D G3DSA:3.20.20.70 81 272 4.9E-21 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_17615 7f6aeb6b759e7f11d03a51e706dee296 337 SUPERFAMILY SSF102114 49 313 1.57E-64 T 11-10-2018 AYJ52_17615 7f6aeb6b759e7f11d03a51e706dee296 337 SMART SM00729 81 286 7.1E-20 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AYJ52_17615 7f6aeb6b759e7f11d03a51e706dee296 337 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 34 70 7.6E-7 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AYJ52_17615 7f6aeb6b759e7f11d03a51e706dee296 337 Hamap MF_00206 Lipoyl synthase [lipA]. 1 322 150.247 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AYJ52_17615 7f6aeb6b759e7f11d03a51e706dee296 337 PIRSF PIRSF005963 1 334 3.4E-128 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 Pfam PF00108 Thiolase, N-terminal domain 4 268 6.3E-78 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 SUPERFAMILY SSF53901 3 276 3.01E-78 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 SUPERFAMILY SSF53901 277 400 1.36E-46 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 Pfam PF02803 Thiolase, C-terminal domain 276 399 1.2E-46 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 Gene3D G3DSA:3.40.47.10 6 282 5.9E-161 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 Gene3D G3DSA:3.40.47.10 141 398 5.9E-161 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 PIRSF PIRSF000429 1 402 9.4E-135 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 1.6E-206 T 11-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AYJ52_12205 4deff23783b78ca5827b2107ede6c449 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.2E-139 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_16390 53c99687aa3e3b6bdb753b5925c3a657 240 SUPERFAMILY SSF52317 47 236 2.07E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_16390 53c99687aa3e3b6bdb753b5925c3a657 240 Gene3D G3DSA:3.40.50.880 3 235 1.5E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_16390 53c99687aa3e3b6bdb753b5925c3a657 240 Pfam PF00117 Glutamine amidotransferase class-I 25 190 1.5E-18 T 11-10-2018 IPR017926 Glutamine amidotransferase AYJ52_00395 e8e82f80da6e7a23804a916125d8ef39 435 Gene3D G3DSA:1.20.1250.20 215 410 2.4E-19 T 11-10-2018 AYJ52_00395 e8e82f80da6e7a23804a916125d8ef39 435 Gene3D G3DSA:1.20.1250.20 3 189 2.7E-17 T 11-10-2018 AYJ52_00395 e8e82f80da6e7a23804a916125d8ef39 435 SUPERFAMILY SSF103473 9 391 2.35E-46 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_00395 e8e82f80da6e7a23804a916125d8ef39 435 Pfam PF07690 Major Facilitator Superfamily 219 389 6.5E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_00395 e8e82f80da6e7a23804a916125d8ef39 435 Pfam PF07690 Major Facilitator Superfamily 13 215 5.5E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_17400 b5a471c866f2e10dfd756d5df7b0dc89 220 SMART SM00448 1 112 4.4E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_17400 b5a471c866f2e10dfd756d5df7b0dc89 220 Gene3D G3DSA:3.40.50.2300 1 123 3.7E-37 T 11-10-2018 AYJ52_17400 b5a471c866f2e10dfd756d5df7b0dc89 220 SMART SM00862 145 216 1.5E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_17400 b5a471c866f2e10dfd756d5df7b0dc89 220 SUPERFAMILY SSF52172 1 179 4.83E-39 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_17400 b5a471c866f2e10dfd756d5df7b0dc89 220 Gene3D G3DSA:1.10.10.10 124 219 2.4E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_17400 b5a471c866f2e10dfd756d5df7b0dc89 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.0E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_17400 b5a471c866f2e10dfd756d5df7b0dc89 220 Pfam PF00072 Response regulator receiver domain 3 113 4.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_02975 ffdeb6537c87e6467e867883f479d526 475 PIRSF PIRSF006060 2 475 2.0E-77 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_02975 ffdeb6537c87e6467e867883f479d526 475 Gene3D G3DSA:1.20.1740.10 20 474 2.8E-63 T 11-10-2018 AYJ52_02975 ffdeb6537c87e6467e867883f479d526 475 ProSitePatterns PS00218 Amino acid permeases signature. 53 84 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_02975 ffdeb6537c87e6467e867883f479d526 475 Pfam PF00324 Amino acid permease 28 472 5.7E-111 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_04705 a9f1091895066a2ae4dfec374c5e16d5 474 Gene3D G3DSA:1.10.10.10 1 69 2.9E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_04705 a9f1091895066a2ae4dfec374c5e16d5 474 Gene3D G3DSA:3.40.640.10 142 360 3.1E-82 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_04705 a9f1091895066a2ae4dfec374c5e16d5 474 Pfam PF00155 Aminotransferase class I and II 135 449 6.7E-27 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_04705 a9f1091895066a2ae4dfec374c5e16d5 474 SUPERFAMILY SSF46785 5 71 1.58E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_04705 a9f1091895066a2ae4dfec374c5e16d5 474 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 5.4E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_04705 a9f1091895066a2ae4dfec374c5e16d5 474 Gene3D G3DSA:3.90.1150.10 100 464 3.1E-82 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_04705 a9f1091895066a2ae4dfec374c5e16d5 474 SUPERFAMILY SSF53383 100 468 4.21E-79 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_04705 a9f1091895066a2ae4dfec374c5e16d5 474 SMART SM00345 8 67 6.6E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_04350 69b8ed2ec74cc242f89d0010cf070fea 455 Pfam PF01554 MatE 252 413 2.0E-28 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AYJ52_04350 69b8ed2ec74cc242f89d0010cf070fea 455 Pfam PF01554 MatE 23 184 1.2E-35 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AYJ52_04350 69b8ed2ec74cc242f89d0010cf070fea 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 424 1.2E-74 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AYJ52_04350 69b8ed2ec74cc242f89d0010cf070fea 455 PIRSF PIRSF006603 1 454 5.1E-107 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AYJ52_04650 05dc0bba20d7f1957da88095d5e75819 278 Gene3D G3DSA:1.20.1080.10 32 277 3.8E-34 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AYJ52_04650 05dc0bba20d7f1957da88095d5e75819 278 Pfam PF01226 Formate/nitrite transporter 34 270 2.0E-39 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AYJ52_14705 deda219195a8445785467f6903ff9e34 297 SUPERFAMILY SSF53850 88 294 1.1E-40 T 11-10-2018 AYJ52_14705 deda219195a8445785467f6903ff9e34 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 3.5E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14705 deda219195a8445785467f6903ff9e34 297 Pfam PF03466 LysR substrate binding domain 95 293 2.5E-22 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14705 deda219195a8445785467f6903ff9e34 297 SUPERFAMILY SSF46785 4 80 2.02E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14705 deda219195a8445785467f6903ff9e34 297 Gene3D G3DSA:1.10.10.10 1 84 4.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14705 deda219195a8445785467f6903ff9e34 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14705 deda219195a8445785467f6903ff9e34 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14705 deda219195a8445785467f6903ff9e34 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14705 deda219195a8445785467f6903ff9e34 297 Gene3D G3DSA:3.40.190.10 88 290 3.2E-58 T 11-10-2018 AYJ52_14705 deda219195a8445785467f6903ff9e34 297 Gene3D G3DSA:3.40.190.10 168 266 3.2E-58 T 11-10-2018 AYJ52_04555 e3251f6762e81731f17eac620f84d70c 191 SUPERFAMILY SSF51182 1 187 5.96E-54 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_04555 e3251f6762e81731f17eac620f84d70c 191 Pfam PF05962 HutD 8 168 2.4E-45 T 11-10-2018 IPR010282 Uncharacterised protein family HutD/Ves AYJ52_04555 e3251f6762e81731f17eac620f84d70c 191 Gene3D G3DSA:2.60.120.10 11 111 9.7E-57 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_04555 e3251f6762e81731f17eac620f84d70c 191 Gene3D G3DSA:2.60.120.10 6 177 9.7E-57 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 Gene3D G3DSA:3.40.220.10 1 165 9.6E-13 T 11-10-2018 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 PRINTS PR00481 Cytosol aminopeptidase signature 327 347 3.0E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 PRINTS PR00481 Cytosol aminopeptidase signature 268 289 3.0E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 PRINTS PR00481 Cytosol aminopeptidase signature 305 326 3.0E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 PRINTS PR00481 Cytosol aminopeptidase signature 246 263 3.0E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 PRINTS PR00481 Cytosol aminopeptidase signature 355 370 3.0E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 37 135 3.1E-9 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 SUPERFAMILY SSF53187 163 478 2.92E-121 T 11-10-2018 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 479 35.067 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 Gene3D G3DSA:3.40.630.10 166 479 5.4E-133 T 11-10-2018 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 SUPERFAMILY SSF52949 1 166 1.24E-12 T 11-10-2018 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 169 470 1.7E-119 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AYJ52_06370 559539fbc0d98a42384ec42a4496989b 482 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 331 338 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AYJ52_17045 4e0ea86a5d4100a0126484f4f246afcb 339 SMART SM00972 270 336 8.3E-13 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_17045 4e0ea86a5d4100a0126484f4f246afcb 339 SUPERFAMILY SSF49401 20 151 2.88E-5 T 11-10-2018 IPR008966 Adhesion domain superfamily AYJ52_17045 4e0ea86a5d4100a0126484f4f246afcb 339 Pfam PF05229 Spore Coat Protein U domain 200 335 1.9E-23 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_04570 e721f62f8646af0b815bcb7b2d50cdcd 409 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 217 1.0E-59 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AYJ52_04570 e721f62f8646af0b815bcb7b2d50cdcd 409 Gene3D G3DSA:3.40.50.300 10 237 2.4E-73 T 11-10-2018 AYJ52_04570 e721f62f8646af0b815bcb7b2d50cdcd 409 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 264 379 1.6E-29 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AYJ52_04570 e721f62f8646af0b815bcb7b2d50cdcd 409 SUPERFAMILY SSF52540 9 327 3.4E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_04570 e721f62f8646af0b815bcb7b2d50cdcd 409 SMART SM00833 264 379 8.2E-51 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AYJ52_09810 a523193e66477c67a561a7f1d7f83fce 301 Hamap MF_00082 Acetylglutamate kinase [argB]. 27 289 50.802 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AYJ52_09810 a523193e66477c67a561a7f1d7f83fce 301 PRINTS PR00474 Glutamate 5-kinase family signature 196 223 1.9E-6 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AYJ52_09810 a523193e66477c67a561a7f1d7f83fce 301 PRINTS PR00474 Glutamate 5-kinase family signature 246 266 1.9E-6 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AYJ52_09810 a523193e66477c67a561a7f1d7f83fce 301 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 1.9E-6 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AYJ52_09810 a523193e66477c67a561a7f1d7f83fce 301 SUPERFAMILY SSF53633 9 296 8.25E-94 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AYJ52_09810 a523193e66477c67a561a7f1d7f83fce 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 271 9.6E-81 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AYJ52_09810 a523193e66477c67a561a7f1d7f83fce 301 Gene3D G3DSA:3.40.1160.10 8 299 3.1E-99 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AYJ52_09810 a523193e66477c67a561a7f1d7f83fce 301 Pfam PF00696 Amino acid kinase family 28 273 1.1E-45 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AYJ52_09810 a523193e66477c67a561a7f1d7f83fce 301 PIRSF PIRSF000728 13 296 3.7E-109 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AYJ52_18740 dfbdb25ecde9a65fa8c7c37a20190946 120 Gene3D G3DSA:3.10.180.10 2 120 5.4E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_18740 dfbdb25ecde9a65fa8c7c37a20190946 120 SUPERFAMILY SSF54593 8 119 6.2E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_07985 075e51cded5f3c166fad3b087dffd568 108 SUPERFAMILY SSF46689 17 100 9.56E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_07985 075e51cded5f3c166fad3b087dffd568 108 Pfam PF01527 Transposase 17 88 5.6E-10 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AYJ52_07985 075e51cded5f3c166fad3b087dffd568 108 Gene3D G3DSA:1.10.10.60 17 95 7.9E-12 T 11-10-2018 AYJ52_18415 cec68b84c973a46c801ba7498dbe5138 745 Gene3D G3DSA:3.40.718.10 408 661 5.9E-7 T 11-10-2018 AYJ52_18415 cec68b84c973a46c801ba7498dbe5138 745 PIRSF PIRSF009407 1 744 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AYJ52_18415 cec68b84c973a46c801ba7498dbe5138 745 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AYJ52_18415 cec68b84c973a46c801ba7498dbe5138 745 SUPERFAMILY SSF53659 5 742 0.0 T 11-10-2018 AYJ52_18415 cec68b84c973a46c801ba7498dbe5138 745 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 744 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AYJ52_13050 bdfe6912225b857a5420bb5435e69d89 254 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 7.3E-17 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_13050 bdfe6912225b857a5420bb5435e69d89 254 SUPERFAMILY SSF47616 134 206 1.02E-8 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_13050 bdfe6912225b857a5420bb5435e69d89 254 Gene3D G3DSA:3.40.30.10 1 102 2.0E-15 T 11-10-2018 AYJ52_13050 bdfe6912225b857a5420bb5435e69d89 254 Gene3D G3DSA:1.20.1050.10 116 219 2.5E-8 T 11-10-2018 AYJ52_13050 bdfe6912225b857a5420bb5435e69d89 254 SUPERFAMILY SSF52833 2 99 1.9E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_13050 bdfe6912225b857a5420bb5435e69d89 254 Pfam PF14497 Glutathione S-transferase, C-terminal domain 138 204 3.0E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AYJ52_19585 dd0d3e19806ed48727e3d15be23bc53e 465 SUPERFAMILY SSF56954 3 462 5.49E-104 T 11-10-2018 AYJ52_19585 dd0d3e19806ed48727e3d15be23bc53e 465 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 462 1.6E-103 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AYJ52_19585 dd0d3e19806ed48727e3d15be23bc53e 465 Gene3D G3DSA:2.20.200.10 102 351 1.7E-126 T 11-10-2018 AYJ52_19585 dd0d3e19806ed48727e3d15be23bc53e 465 Gene3D G3DSA:1.20.1600.10 56 462 1.7E-126 T 11-10-2018 AYJ52_19585 dd0d3e19806ed48727e3d15be23bc53e 465 Pfam PF02321 Outer membrane efflux protein 279 460 1.8E-31 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_19585 dd0d3e19806ed48727e3d15be23bc53e 465 Pfam PF02321 Outer membrane efflux protein 65 251 5.0E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_05525 37c0878405664dd7e6cd879175151777 399 SUPERFAMILY SSF103473 11 392 1.14E-54 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_05525 37c0878405664dd7e6cd879175151777 399 Gene3D G3DSA:1.20.1250.20 23 394 2.0E-46 T 11-10-2018 AYJ52_05525 37c0878405664dd7e6cd879175151777 399 Pfam PF07690 Major Facilitator Superfamily 30 278 6.9E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 Pfam PF10397 Adenylosuccinate lyase C-terminus 365 442 3.3E-17 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 SMART SM00998 364 443 1.3E-26 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 Gene3D G3DSA:1.10.275.10 7 105 2.3E-35 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 Pfam PF00206 Lyase 15 299 4.6E-55 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 Gene3D G3DSA:1.10.40.30 363 443 2.8E-30 T 11-10-2018 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 Gene3D G3DSA:1.20.200.10 106 361 2.4E-100 T 11-10-2018 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 6.5E-21 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 PRINTS PR00149 Fumarate lyase superfamily signature 101 119 6.5E-21 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 6.5E-21 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 6.5E-21 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 2.5E-9 T 11-10-2018 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 PRINTS PR00145 Argininosuccinate lyase family signature 100 122 2.5E-9 T 11-10-2018 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 2.5E-9 T 11-10-2018 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 PRINTS PR00145 Argininosuccinate lyase family signature 141 161 2.5E-9 T 11-10-2018 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 4 348 2.2E-115 T 11-10-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 AYJ52_15210 830c7dd6361969768fc4dad02f8c1568 451 SUPERFAMILY SSF48557 4 444 2.67E-116 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.2E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.2E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 3.2E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.2E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.2E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 Pfam PF00106 short chain dehydrogenase 17 203 2.8E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 Gene3D G3DSA:3.40.50.720 13 264 4.9E-66 T 11-10-2018 AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 2.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 SUPERFAMILY SSF51735 14 269 3.88E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_11095 8df077cff561f014a77dfe2e30d12489 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 19 212 7.5E-29 T 11-10-2018 IPR003111 Lon, substrate-binding domain AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 584 786 4.7E-84 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 Gene3D G3DSA:1.20.58.1480 132 256 8.3E-24 T 11-10-2018 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 SMART SM00464 19 214 3.4E-62 T 11-10-2018 IPR003111 Lon, substrate-binding domain AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 717 736 7.9E-50 T 11-10-2018 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 687 706 7.9E-50 T 11-10-2018 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 369 388 7.9E-50 T 11-10-2018 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 609 625 7.9E-50 T 11-10-2018 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 740 758 7.9E-50 T 11-10-2018 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 365 501 6.0E-20 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 Gene3D G3DSA:2.30.130.40 13 127 5.1E-27 T 11-10-2018 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 Gene3D G3DSA:1.10.8.60 504 598 1.5E-31 T 11-10-2018 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 Gene3D G3DSA:3.30.230.10 599 786 2.4E-73 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 SMART SM00382 361 505 2.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 TIGRFAM TIGR00763 lon: endopeptidase La 21 784 4.8E-279 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 SUPERFAMILY SSF88697 19 212 4.22E-28 T 11-10-2018 IPR015947 PUA-like superfamily AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 Hamap MF_01973 Lon protease [lon]. 20 786 66.793 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 SUPERFAMILY SSF54211 609 784 2.05E-53 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 SUPERFAMILY SSF52540 327 598 1.95E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 Gene3D G3DSA:3.40.50.300 326 503 9.1E-63 T 11-10-2018 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 PIRSF PIRSF001174 6 789 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AYJ52_10575 0d48260fce22e0e2f54d03f2e7160078 809 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 690 698 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AYJ52_11700 c873a43508efe9db2c942fd65483be6f 199 Pfam PF09186 Domain of unknown function (DUF1949) 133 187 4.1E-5 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AYJ52_11700 c873a43508efe9db2c942fd65483be6f 199 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 71 100 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AYJ52_11700 c873a43508efe9db2c942fd65483be6f 199 SUPERFAMILY SSF54980 128 194 5.83E-8 T 11-10-2018 IPR035647 EF-G domain III/V-like AYJ52_11700 c873a43508efe9db2c942fd65483be6f 199 SUPERFAMILY SSF54211 4 123 6.45E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_11700 c873a43508efe9db2c942fd65483be6f 199 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 9.7E-30 T 11-10-2018 IPR001498 Impact, N-terminal AYJ52_11700 c873a43508efe9db2c942fd65483be6f 199 Gene3D G3DSA:3.30.230.30 1 125 7.8E-46 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 SMART SM01240 7 474 0.0 T 11-10-2018 AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 487 82.335 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 SUPERFAMILY SSF54631 93 202 1.39E-26 T 11-10-2018 AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 6.5E-186 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 Gene3D G3DSA:3.20.20.70 2 487 4.7E-207 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 PIRSF PIRSF000130 1 488 1.9E-201 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 Pfam PF00571 CBS domain 157 203 8.7E-4 T 11-10-2018 IPR000644 CBS domain AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 Pfam PF00571 CBS domain 89 137 6.5E-11 T 11-10-2018 IPR000644 CBS domain AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 SUPERFAMILY SSF51412 2 478 2.35E-125 T 11-10-2018 AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 474 4.4E-159 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 SMART SM00116 96 143 4.8E-9 T 11-10-2018 IPR000644 CBS domain AYJ52_04070 49b634cb15858ec3b613c9f3fdcd7b1f 488 SMART SM00116 157 205 1.7E-5 T 11-10-2018 IPR000644 CBS domain AYJ52_00300 8b91beae9d7497956e4561c7c9651830 301 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 17 279 55.415 T 11-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 AYJ52_00300 8b91beae9d7497956e4561c7c9651830 301 PIRSF PIRSF004976 6 292 5.5E-70 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AYJ52_00300 8b91beae9d7497956e4561c7c9651830 301 Pfam PF01171 PP-loop family 49 212 3.3E-15 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AYJ52_00300 8b91beae9d7497956e4561c7c9651830 301 SUPERFAMILY SSF52402 26 244 3.03E-54 T 11-10-2018 AYJ52_00300 8b91beae9d7497956e4561c7c9651830 301 Gene3D G3DSA:3.40.50.620 21 276 8.1E-46 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_08725 bc5c1b99c89b450979e1f14f94dfc0e0 361 Pfam PF00155 Aminotransferase class I and II 31 355 1.6E-59 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_08725 bc5c1b99c89b450979e1f14f94dfc0e0 361 SUPERFAMILY SSF53383 27 355 1.38E-75 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_08725 bc5c1b99c89b450979e1f14f94dfc0e0 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 360 57.849 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AYJ52_08725 bc5c1b99c89b450979e1f14f94dfc0e0 361 Gene3D G3DSA:3.90.1150.10 26 350 3.6E-111 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_08725 bc5c1b99c89b450979e1f14f94dfc0e0 361 Gene3D G3DSA:3.40.640.10 44 268 3.6E-111 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_08725 bc5c1b99c89b450979e1f14f94dfc0e0 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 13 358 9.7E-96 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AYJ52_03295 6a983faf4994057c5ebe1d90a947e021 499 Gene3D G3DSA:3.40.1390.10 1 77 1.4E-8 T 11-10-2018 AYJ52_03295 6a983faf4994057c5ebe1d90a947e021 499 Gene3D G3DSA:3.40.1190.10 99 337 2.5E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_03295 6a983faf4994057c5ebe1d90a947e021 499 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 6 485 30.806 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AYJ52_03295 6a983faf4994057c5ebe1d90a947e021 499 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 416 3.9E-18 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AYJ52_03295 6a983faf4994057c5ebe1d90a947e021 499 SUPERFAMILY SSF63418 12 94 2.75E-9 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AYJ52_03295 6a983faf4994057c5ebe1d90a947e021 499 Gene3D G3DSA:3.90.190.20 341 496 3.3E-55 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_03295 6a983faf4994057c5ebe1d90a947e021 499 SUPERFAMILY SSF53244 334 485 3.01E-47 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_03295 6a983faf4994057c5ebe1d90a947e021 499 SUPERFAMILY SSF53623 99 330 1.96E-70 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_03295 6a983faf4994057c5ebe1d90a947e021 499 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 485 1.0E-140 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AYJ52_03295 6a983faf4994057c5ebe1d90a947e021 499 Pfam PF08245 Mur ligase middle domain 108 313 2.0E-51 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AYJ52_03125 21be21ad7e20907137555724a9fe3e68 1284 Gene3D G3DSA:3.40.50.410 48 173 2.2E-10 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AYJ52_03125 21be21ad7e20907137555724a9fe3e68 1284 Pfam PF05567 Neisseria PilC beta-propeller domain 714 965 2.3E-15 T 11-10-2018 IPR008707 PilC beta-propeller domain AYJ52_03125 21be21ad7e20907137555724a9fe3e68 1284 Pfam PF13519 von Willebrand factor type A domain 51 160 3.3E-8 T 11-10-2018 IPR002035 von Willebrand factor, type A AYJ52_03125 21be21ad7e20907137555724a9fe3e68 1284 SUPERFAMILY SSF53300 49 163 9.38E-9 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AYJ52_11835 1e24d3aafd2a27d4c5d96754477aebac 183 Gene3D G3DSA:1.10.357.10 5 180 8.0E-18 T 11-10-2018 AYJ52_11835 1e24d3aafd2a27d4c5d96754477aebac 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 55 1.7E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_11835 1e24d3aafd2a27d4c5d96754477aebac 183 SUPERFAMILY SSF46689 12 69 1.64E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11835 1e24d3aafd2a27d4c5d96754477aebac 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.3E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_11835 1e24d3aafd2a27d4c5d96754477aebac 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.3E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_16700 a26652c258adcaf4208c491943081f57 251 Pfam PF14237 Domain of unknown function (DUF4339) 4 46 1.4E-15 T 11-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 AYJ52_16700 a26652c258adcaf4208c491943081f57 251 Pfam PF06271 RDD family 89 245 3.8E-22 T 11-10-2018 IPR010432 RDD AYJ52_06850 c41dabc715ebca92b40a8ea61281cb43 198 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.51 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AYJ52_06850 c41dabc715ebca92b40a8ea61281cb43 198 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 1.5E-57 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AYJ52_06850 c41dabc715ebca92b40a8ea61281cb43 198 SUPERFAMILY SSF52540 1 196 4.96E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_06850 c41dabc715ebca92b40a8ea61281cb43 198 Gene3D G3DSA:3.40.50.300 1 198 3.1E-69 T 11-10-2018 AYJ52_06850 c41dabc715ebca92b40a8ea61281cb43 198 Pfam PF01121 Dephospho-CoA kinase 4 178 1.4E-65 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AYJ52_07200 9d60483d82bb55ee4ab64f3932e117e6 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 249 3.8E-42 T 11-10-2018 AYJ52_07200 9d60483d82bb55ee4ab64f3932e117e6 251 Gene3D G3DSA:3.40.50.720 2 251 5.8E-59 T 11-10-2018 AYJ52_07200 9d60483d82bb55ee4ab64f3932e117e6 251 SUPERFAMILY SSF51735 7 250 1.11E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_07200 9d60483d82bb55ee4ab64f3932e117e6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.8E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07200 9d60483d82bb55ee4ab64f3932e117e6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.8E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07200 9d60483d82bb55ee4ab64f3932e117e6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.8E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07200 9d60483d82bb55ee4ab64f3932e117e6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.8E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_07200 9d60483d82bb55ee4ab64f3932e117e6 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.8E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00660 74b9a883ec41786539cc4dda49afdcd3 145 Gene3D G3DSA:3.40.50.620 1 145 3.9E-39 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_00660 74b9a883ec41786539cc4dda49afdcd3 145 SUPERFAMILY SSF52402 3 145 7.37E-39 T 11-10-2018 AYJ52_00660 74b9a883ec41786539cc4dda49afdcd3 145 PIRSF PIRSF006276 1 145 1.1E-20 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_00660 74b9a883ec41786539cc4dda49afdcd3 145 PRINTS PR01438 Universal stress protein signature 123 145 4.7E-22 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_00660 74b9a883ec41786539cc4dda49afdcd3 145 PRINTS PR01438 Universal stress protein signature 105 117 4.7E-22 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_00660 74b9a883ec41786539cc4dda49afdcd3 145 PRINTS PR01438 Universal stress protein signature 3 21 4.7E-22 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_00660 74b9a883ec41786539cc4dda49afdcd3 145 Pfam PF00582 Universal stress protein family 3 145 2.3E-31 T 11-10-2018 IPR006016 UspA AYJ52_05835 828a4d48f89a6cb04738c463c0337430 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.5E-35 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AYJ52_05835 828a4d48f89a6cb04738c463c0337430 156 SUPERFAMILY SSF81573 62 121 5.1E-12 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AYJ52_05835 828a4d48f89a6cb04738c463c0337430 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.2 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AYJ52_05835 828a4d48f89a6cb04738c463c0337430 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.3E-45 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AYJ52_05835 828a4d48f89a6cb04738c463c0337430 156 Gene3D G3DSA:1.20.5.620 62 122 3.1E-13 T 11-10-2018 AYJ52_16630 cb5054bcf450164c04f873892d622061 362 SUPERFAMILY SSF75620 12 353 2.88E-135 T 11-10-2018 AYJ52_16630 cb5054bcf450164c04f873892d622061 362 Gene3D G3DSA:3.30.70.1660 112 342 3.4E-95 T 11-10-2018 AYJ52_16630 cb5054bcf450164c04f873892d622061 362 SMART SM00937 63 178 1.3E-65 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AYJ52_16630 cb5054bcf450164c04f873892d622061 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 358 1.1E-162 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AYJ52_16630 cb5054bcf450164c04f873892d622061 362 Pfam PF03462 PCRF domain 14 203 1.3E-73 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AYJ52_16630 cb5054bcf450164c04f873892d622061 362 Gene3D G3DSA:3.30.160.20 210 297 3.4E-95 T 11-10-2018 AYJ52_16630 cb5054bcf450164c04f873892d622061 362 Gene3D G3DSA:1.20.58.410 2 101 1.3E-5 T 11-10-2018 AYJ52_16630 cb5054bcf450164c04f873892d622061 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AYJ52_16630 cb5054bcf450164c04f873892d622061 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.508 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AYJ52_16630 cb5054bcf450164c04f873892d622061 362 Pfam PF00472 RF-1 domain 213 321 2.6E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AYJ52_01370 e5f898bf14160165c2bfda07f7b3a750 707 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 2 691 4.0E-245 T 11-10-2018 IPR010019 Integral membrane protein, YccS AYJ52_01370 e5f898bf14160165c2bfda07f7b3a750 707 Pfam PF12805 FUSC-like inner membrane protein yccS 51 332 5.4E-88 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal AYJ52_01370 e5f898bf14160165c2bfda07f7b3a750 707 Pfam PF13515 Fusaric acid resistance protein-like 394 513 5.6E-20 T 11-10-2018 AYJ52_01370 e5f898bf14160165c2bfda07f7b3a750 707 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 2 691 9.6E-229 T 11-10-2018 IPR010020 Integral membrane protein, YccS/YhfK AYJ52_08905 2036841270a3da12c4358840603961e6 219 Gene3D G3DSA:3.10.180.10 1 108 3.1E-6 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_08905 2036841270a3da12c4358840603961e6 219 Pfam PF13468 Glyoxalase-like domain 4 67 1.4E-8 T 11-10-2018 IPR025870 Glyoxalase-like domain AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 22 651 2.5E-228 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 Pfam PF00271 Helicase conserved C-terminal domain 466 576 2.1E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 Pfam PF17191 RecG wedge domain 6 163 1.9E-21 T 11-10-2018 IPR033454 RecG, wedge domain AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 SUPERFAMILY SSF50249 2 166 1.11E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 Pfam PF00270 DEAD/DEAH box helicase 262 422 1.1E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 SUPERFAMILY SSF52540 188 442 4.9E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 SMART SM00490 493 577 4.6E-20 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 Gene3D G3DSA:3.40.50.300 446 618 1.6E-53 T 11-10-2018 AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 Gene3D G3DSA:3.40.50.300 198 439 8.4E-84 T 11-10-2018 AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 SUPERFAMILY SSF52540 282 639 1.33E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 Gene3D G3DSA:2.40.50.140 40 134 4.3E-10 T 11-10-2018 AYJ52_02760 de49a1a47cc832cc4fc00a658d2154f1 681 SMART SM00487 255 448 3.0E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ52_00990 983e182659b9d18abeafa8333867ac68 294 SUPERFAMILY SSF46785 1 108 5.13E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_00990 983e182659b9d18abeafa8333867ac68 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_00990 983e182659b9d18abeafa8333867ac68 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_00990 983e182659b9d18abeafa8333867ac68 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_00990 983e182659b9d18abeafa8333867ac68 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.8E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_00990 983e182659b9d18abeafa8333867ac68 294 Gene3D G3DSA:1.10.10.10 1 90 2.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_00990 983e182659b9d18abeafa8333867ac68 294 Gene3D G3DSA:3.40.190.290 91 292 1.2E-43 T 11-10-2018 AYJ52_00990 983e182659b9d18abeafa8333867ac68 294 Pfam PF03466 LysR substrate binding domain 88 289 6.4E-39 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_00990 983e182659b9d18abeafa8333867ac68 294 SUPERFAMILY SSF53850 90 293 7.06E-36 T 11-10-2018 AYJ52_02730 f5fcda066072a6f41b45f65526bd74d3 315 PIRSF PIRSF007580 8 311 2.9E-80 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_02730 f5fcda066072a6f41b45f65526bd74d3 315 Pfam PF10118 Predicted metal-dependent hydrolase 22 291 9.4E-66 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 6 870 0.0 T 11-10-2018 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Gene3D G3DSA:3.30.1360.40 234 331 2.4E-221 T 11-10-2018 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Gene3D G3DSA:3.90.199.10 31 524 2.4E-221 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 872 23.791 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 SUPERFAMILY SSF56719 28 525 2.22E-175 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 SUPERFAMILY SSF101904 536 880 2.35E-100 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 509 9.5E-154 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 SMART SM00434 9 502 8.6E-271 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Gene3D G3DSA:1.10.268.10 368 496 2.4E-221 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Gene3D G3DSA:2.120.10.90 533 871 4.5E-116 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 648 691 6.0E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 774 820 7.8E-16 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 696 739 2.1E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 543 587 3.5E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 825 870 8.6E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AYJ52_00155 630eae0201d25bc57fae73f42b95b95f 904 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 640 3.7E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AYJ52_13570 8106858b1af176ee63620e2470bc2957 154 SUPERFAMILY SSF55729 3 138 3.31E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_13570 8106858b1af176ee63620e2470bc2957 154 Pfam PF00583 Acetyltransferase (GNAT) family 38 129 8.3E-14 T 11-10-2018 IPR000182 GNAT domain AYJ52_13570 8106858b1af176ee63620e2470bc2957 154 Gene3D G3DSA:3.40.630.30 43 148 4.0E-22 T 11-10-2018 AYJ52_03415 7799230b117eadb78d67e85d41de8e56 127 Pfam PF08238 Sel1 repeat 53 73 5.6 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_03415 7799230b117eadb78d67e85d41de8e56 127 Pfam PF08238 Sel1 repeat 74 110 1.7E-10 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_03415 7799230b117eadb78d67e85d41de8e56 127 SUPERFAMILY SSF81901 38 115 1.57E-13 T 11-10-2018 AYJ52_03415 7799230b117eadb78d67e85d41de8e56 127 SMART SM00671 74 110 6.2E-7 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_03415 7799230b117eadb78d67e85d41de8e56 127 Gene3D G3DSA:1.25.40.10 8 124 9.6E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_04585 7d7793b665d2dc9899f456e0dbaf5ed8 435 SUPERFAMILY SSF56529 124 419 7.46E-104 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AYJ52_04585 7d7793b665d2dc9899f456e0dbaf5ed8 435 Pfam PF09298 Fumarylacetoacetase N-terminal 20 122 5.1E-32 T 11-10-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AYJ52_04585 7d7793b665d2dc9899f456e0dbaf5ed8 435 SUPERFAMILY SSF63433 7 122 1.07E-35 T 11-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AYJ52_04585 7d7793b665d2dc9899f456e0dbaf5ed8 435 Gene3D G3DSA:3.90.850.10 120 421 8.5E-129 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AYJ52_04585 7d7793b665d2dc9899f456e0dbaf5ed8 435 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 7 420 5.0E-177 T 11-10-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AYJ52_04585 7d7793b665d2dc9899f456e0dbaf5ed8 435 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 128 416 3.3E-57 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AYJ52_04585 7d7793b665d2dc9899f456e0dbaf5ed8 435 Gene3D G3DSA:2.30.30.230 1 119 1.8E-39 T 11-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AYJ52_18800 a996dc54f3636d9ac2a0b46abb2f2ebf 135 Gene3D G3DSA:3.10.129.10 1 130 6.3E-39 T 11-10-2018 AYJ52_18800 a996dc54f3636d9ac2a0b46abb2f2ebf 135 Pfam PF03061 Thioesterase superfamily 19 101 3.0E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AYJ52_18800 a996dc54f3636d9ac2a0b46abb2f2ebf 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 5 126 2.7E-45 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AYJ52_18800 a996dc54f3636d9ac2a0b46abb2f2ebf 135 PIRSF PIRSF003230 1 135 5.0E-51 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AYJ52_18800 a996dc54f3636d9ac2a0b46abb2f2ebf 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 114 6.4E-26 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AYJ52_18800 a996dc54f3636d9ac2a0b46abb2f2ebf 135 SUPERFAMILY SSF54637 2 129 1.1E-35 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_08435 386e203b57f097f9f4b75ad74dfd1a58 463 SUPERFAMILY SSF50249 11 75 1.03E-8 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_08435 386e203b57f097f9f4b75ad74dfd1a58 463 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 16 458 67.873 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AYJ52_08435 386e203b57f097f9f4b75ad74dfd1a58 463 Gene3D G3DSA:2.40.50.140 2 96 9.0E-19 T 11-10-2018 AYJ52_08435 386e203b57f097f9f4b75ad74dfd1a58 463 Gene3D G3DSA:3.40.1350.30 144 287 1.8E-110 T 11-10-2018 AYJ52_08435 386e203b57f097f9f4b75ad74dfd1a58 463 SUPERFAMILY SSF53335 85 457 2.05E-79 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_08435 386e203b57f097f9f4b75ad74dfd1a58 463 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 42 450 6.4E-98 T 11-10-2018 AYJ52_08435 386e203b57f097f9f4b75ad74dfd1a58 463 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 108 457 9.9E-30 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AYJ52_08435 386e203b57f097f9f4b75ad74dfd1a58 463 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 389 419 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AYJ52_08435 386e203b57f097f9f4b75ad74dfd1a58 463 Gene3D G3DSA:3.40.50.150 97 452 1.8E-110 T 11-10-2018 AYJ52_19410 b37d568ad60bab5f0394636759ced7e0 667 Pfam PF02384 N-6 DNA Methylase 156 467 1.7E-44 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AYJ52_19410 b37d568ad60bab5f0394636759ced7e0 667 Pfam PF12161 HsdM N-terminal domain 12 139 9.8E-17 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AYJ52_19410 b37d568ad60bab5f0394636759ced7e0 667 SUPERFAMILY SSF53335 11 513 3.99E-96 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_19410 b37d568ad60bab5f0394636759ced7e0 667 Gene3D G3DSA:3.40.50.150 156 480 9.7E-73 T 11-10-2018 AYJ52_07945 3086d274de8e64fe515f5967f8fe57f8 190 SUPERFAMILY SSF46689 3 56 1.28E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_07945 3086d274de8e64fe515f5967f8fe57f8 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 3.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_07945 3086d274de8e64fe515f5967f8fe57f8 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 3.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_07945 3086d274de8e64fe515f5967f8fe57f8 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.5E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_07945 3086d274de8e64fe515f5967f8fe57f8 190 SUPERFAMILY SSF48498 75 178 9.39E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_07945 3086d274de8e64fe515f5967f8fe57f8 190 Gene3D G3DSA:1.10.357.10 1 181 3.4E-34 T 11-10-2018 AYJ52_18915 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_18915 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.6E-71 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_18915 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_18915 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_18915 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 1 270 1.5E-75 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_18915 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AYJ52_12435 c90c79fb2b63482dd891eda7349adf6b 533 Gene3D G3DSA:3.90.226.10 272 533 3.7E-102 T 11-10-2018 AYJ52_12435 c90c79fb2b63482dd891eda7349adf6b 533 SUPERFAMILY SSF52096 22 270 8.07E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_12435 c90c79fb2b63482dd891eda7349adf6b 533 SUPERFAMILY SSF52096 237 515 4.54E-86 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_12435 c90c79fb2b63482dd891eda7349adf6b 533 Pfam PF01039 Carboxyl transferase domain 48 524 4.6E-152 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AYJ52_12435 c90c79fb2b63482dd891eda7349adf6b 533 Gene3D G3DSA:3.90.226.10 1 271 3.8E-98 T 11-10-2018 AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 SUPERFAMILY SSF51735 6 259 1.35E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 Pfam PF00106 short chain dehydrogenase 8 199 1.9E-59 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 Gene3D G3DSA:3.40.50.720 7 260 5.1E-88 T 11-10-2018 AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14025 c10fa5d492ddbe44a406da1b8c4a79d5 261 TIGRFAM TIGR02415 23BDH: acetoin reductases 8 261 3.0E-108 T 11-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 AYJ52_00645 c316b77f4fe0a169fdeee4a287ad9b60 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 2.2E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_00645 c316b77f4fe0a169fdeee4a287ad9b60 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AYJ52_00645 c316b77f4fe0a169fdeee4a287ad9b60 195 Gene3D G3DSA:1.10.357.10 2 194 2.6E-52 T 11-10-2018 AYJ52_00645 c316b77f4fe0a169fdeee4a287ad9b60 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 9.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_00645 c316b77f4fe0a169fdeee4a287ad9b60 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 9.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_00645 c316b77f4fe0a169fdeee4a287ad9b60 195 SUPERFAMILY SSF46689 4 86 1.8E-22 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_16090 9511edbb914f8031ebecfb2d7255e5b5 284 SUPERFAMILY SSF54637 179 282 2.9E-16 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_16090 9511edbb914f8031ebecfb2d7255e5b5 284 SUPERFAMILY SSF54637 33 154 1.08E-6 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_16090 9511edbb914f8031ebecfb2d7255e5b5 284 Gene3D G3DSA:3.10.129.10 34 284 4.2E-65 T 11-10-2018 AYJ52_16090 9511edbb914f8031ebecfb2d7255e5b5 284 PRINTS PR01483 Fatty acid synthase signature 206 227 7.8E-5 T 11-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AYJ52_16090 9511edbb914f8031ebecfb2d7255e5b5 284 PRINTS PR01483 Fatty acid synthase signature 184 206 7.8E-5 T 11-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AYJ52_16090 9511edbb914f8031ebecfb2d7255e5b5 284 Pfam PF01575 MaoC like domain 178 231 1.1E-11 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AYJ52_01130 9c610f2bc3fca469124fdc0ce8bb2c28 455 SUPERFAMILY SSF52540 183 430 2.48E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_01130 9c610f2bc3fca469124fdc0ce8bb2c28 455 Pfam PF00772 DnaB-like helicase N terminal domain 6 106 9.9E-23 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AYJ52_01130 9c610f2bc3fca469124fdc0ce8bb2c28 455 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 5 443 2.4E-116 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AYJ52_01130 9c610f2bc3fca469124fdc0ce8bb2c28 455 SUPERFAMILY SSF48024 2 113 7.72E-23 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AYJ52_01130 9c610f2bc3fca469124fdc0ce8bb2c28 455 Gene3D G3DSA:3.40.50.300 145 447 7.1E-84 T 11-10-2018 AYJ52_01130 9c610f2bc3fca469124fdc0ce8bb2c28 455 Pfam PF03796 DnaB-like helicase C terminal domain 184 441 1.9E-78 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AYJ52_01130 9c610f2bc3fca469124fdc0ce8bb2c28 455 Gene3D G3DSA:1.10.860.10 2 144 1.0E-27 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AYJ52_19635 4f5cd7d992f0145219fd6f208a51114c 106 PIRSF PIRSF039032 1 105 2.8E-38 T 11-10-2018 IPR009387 Toxin HigB-2 AYJ52_19635 4f5cd7d992f0145219fd6f208a51114c 106 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 41 102 4.5E-12 T 11-10-2018 IPR009387 Toxin HigB-2 AYJ52_03510 f0f576452489ba57574cb0e6c99d9dbf 205 Gene3D G3DSA:3.40.50.880 1 205 6.9E-79 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_03510 f0f576452489ba57574cb0e6c99d9dbf 205 Pfam PF00117 Glutamine amidotransferase class-I 6 200 2.6E-22 T 11-10-2018 IPR017926 Glutamine amidotransferase AYJ52_03510 f0f576452489ba57574cb0e6c99d9dbf 205 PIRSF PIRSF000495 2 205 2.3E-72 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AYJ52_03510 f0f576452489ba57574cb0e6c99d9dbf 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 203 4.1E-71 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AYJ52_03510 f0f576452489ba57574cb0e6c99d9dbf 205 SUPERFAMILY SSF52317 2 203 2.08E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_03510 f0f576452489ba57574cb0e6c99d9dbf 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 203 35.559 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 SUPERFAMILY SSF53223 21 210 1.86E-74 T 11-10-2018 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 216 460 2.6E-87 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 SMART SM00839 218 460 1.9E-90 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 71 198 9.6E-50 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 Gene3D G3DSA:3.40.50.10860 69 204 1.9E-173 T 11-10-2018 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 Gene3D G3DSA:1.10.285.10 22 398 1.9E-173 T 11-10-2018 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 128 142 2.7E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 386 397 2.7E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 207 229 2.7E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 249 269 2.7E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 Gene3D G3DSA:1.10.285.10 400 462 3.4E-11 T 11-10-2018 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 PIRSF PIRSF000185 36 462 2.8E-115 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 136 149 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 SUPERFAMILY SSF51735 216 461 3.94E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_10555 eb5db33c1c9616e8f5c7933f13920b85 462 Gene3D G3DSA:3.40.50.720 223 387 1.9E-173 T 11-10-2018 AYJ52_06255 44fc347379ed2bd97422581cb9e4ea0e 357 Gene3D G3DSA:3.30.70.1350 258 337 1.6E-7 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AYJ52_06255 44fc347379ed2bd97422581cb9e4ea0e 357 Pfam PF16916 Dimerisation domain of Zinc Transporter 263 334 5.6E-8 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AYJ52_06255 44fc347379ed2bd97422581cb9e4ea0e 357 Pfam PF01545 Cation efflux family 62 255 4.0E-46 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_06255 44fc347379ed2bd97422581cb9e4ea0e 357 Gene3D G3DSA:1.20.1510.10 58 255 2.8E-43 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_06255 44fc347379ed2bd97422581cb9e4ea0e 357 SUPERFAMILY SSF161111 57 256 5.36E-55 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_06255 44fc347379ed2bd97422581cb9e4ea0e 357 SUPERFAMILY SSF160240 260 334 1.31E-13 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AYJ52_06255 44fc347379ed2bd97422581cb9e4ea0e 357 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 58 335 9.1E-88 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_18685 045974cbe21e47bb206a22588b9d5063 294 SUPERFAMILY SSF161098 25 280 2.88E-55 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_18685 045974cbe21e47bb206a22588b9d5063 294 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 23 281 2.1E-99 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AYJ52_18685 045974cbe21e47bb206a22588b9d5063 294 Gene3D G3DSA:1.10.3720.10 27 285 2.6E-62 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_18685 045974cbe21e47bb206a22588b9d5063 294 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 26 284 4.9E-128 T 11-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AYJ52_18685 045974cbe21e47bb206a22588b9d5063 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 280 1.7E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_09440 03c2c0cba6f0cc91ec5c3b708b5fef27 198 SUPERFAMILY SSF46785 97 172 1.28E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_09440 03c2c0cba6f0cc91ec5c3b708b5fef27 198 PIRSF PIRSF019345 6 198 2.0E-53 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AYJ52_09440 03c2c0cba6f0cc91ec5c3b708b5fef27 198 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 24 186 1.7E-33 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AYJ52_09440 03c2c0cba6f0cc91ec5c3b708b5fef27 198 Gene3D G3DSA:1.10.10.10 14 94 2.7E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_09440 03c2c0cba6f0cc91ec5c3b708b5fef27 198 SUPERFAMILY SSF46785 18 94 1.11E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_09440 03c2c0cba6f0cc91ec5c3b708b5fef27 198 Gene3D G3DSA:1.10.10.10 95 190 2.3E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_09440 03c2c0cba6f0cc91ec5c3b708b5fef27 198 Pfam PF04079 Segregation and condensation complex subunit ScpB 23 181 8.0E-49 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AYJ52_02800 a94dd046733ce09868c359e8990f1b9c 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 257 9.9E-83 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AYJ52_02800 a94dd046733ce09868c359e8990f1b9c 258 Pfam PF02405 Permease MlaE 41 252 1.8E-71 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 578 1.2E-178 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 SUPERFAMILY SSF47781 510 598 8.26E-23 T 11-10-2018 IPR010994 RuvA domain 2-like AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 Pfam PF01541 GIY-YIG catalytic domain 21 95 9.2E-9 T 11-10-2018 IPR000305 GIY-YIG endonuclease AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 SUPERFAMILY SSF82771 19 102 3.79E-23 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 Gene3D G3DSA:3.30.420.340 375 541 4.4E-52 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 Pfam PF02151 UvrB/uvrC motif 208 241 3.2E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 6 596 26.743 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 Pfam PF14520 Helix-hairpin-helix domain 547 595 9.6E-6 T 11-10-2018 AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 531 1.3E-48 T 11-10-2018 IPR001162 UvrC family homology region AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 SUPERFAMILY SSF46600 193 246 1.16E-12 T 11-10-2018 IPR036876 UVR domain superfamily AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 Gene3D G3DSA:1.10.150.20 544 598 5.8E-19 T 11-10-2018 AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 SMART SM00465 19 100 2.2E-23 T 11-10-2018 IPR000305 GIY-YIG endonuclease AYJ52_06770 d3db2601b9f107cbad93c34d1d17653d 599 Gene3D G3DSA:3.40.1440.10 6 104 1.0E-32 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AYJ52_00885 9e31731e35732059dc7dcbe84d593587 231 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 20 231 28.457 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AYJ52_00885 9e31731e35732059dc7dcbe84d593587 231 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 68 221 3.4E-39 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AYJ52_00885 9e31731e35732059dc7dcbe84d593587 231 SUPERFAMILY SSF89392 39 231 4.32E-46 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AYJ52_00885 9e31731e35732059dc7dcbe84d593587 231 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 43 231 1.2E-23 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AYJ52_00885 9e31731e35732059dc7dcbe84d593587 231 Gene3D G3DSA:2.50.20.10 40 231 1.4E-50 T 11-10-2018 AYJ52_04685 18863521b2416b21f850528894747ee4 178 Pfam PF01551 Peptidase family M23 72 166 9.4E-24 T 11-10-2018 IPR016047 Peptidase M23 AYJ52_04685 18863521b2416b21f850528894747ee4 178 SUPERFAMILY SSF51261 59 177 6.28E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif AYJ52_04685 18863521b2416b21f850528894747ee4 178 Gene3D G3DSA:2.70.70.10 36 178 1.8E-46 T 11-10-2018 IPR011055 Duplicated hybrid motif AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 Gene3D G3DSA:3.30.300.180 1 109 6.2E-20 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 Gene3D G3DSA:1.10.8.60 300 370 1.1E-21 T 11-10-2018 AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 Pfam PF00308 Bacterial dnaA protein 133 351 4.6E-84 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 SMART SM00382 166 296 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 SMART SM00760 377 446 5.0E-39 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 SUPERFAMILY SSF48295 366 468 4.97E-33 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 Gene3D G3DSA:1.10.1750.10 376 469 3.2E-31 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 378 446 5.1E-28 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 Pfam PF11638 DnaA N-terminal domain 2 60 7.7E-13 T 11-10-2018 IPR024633 DnaA N-terminal domain AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 Gene3D G3DSA:3.40.50.300 132 299 8.9E-46 T 11-10-2018 AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 3 466 4.0E-154 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 468 29.611 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 SUPERFAMILY SSF52540 134 346 3.09E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 167 187 1.1E-48 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 265 292 1.1E-48 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 231 245 1.1E-48 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 199 213 1.1E-48 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 427 446 1.1E-48 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AYJ52_04915 b0b1f20338a53b9e1b39a4876b9dc8d3 469 ProSitePatterns PS01008 DnaA protein signature. 427 446 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AYJ52_10425 7e365bc910a2b80733d2624c008be44d 480 Gene3D G3DSA:2.40.160.130 22 475 3.0E-160 T 11-10-2018 IPR038636 Capsule assembly protein Wzi superfamily AYJ52_10425 7e365bc910a2b80733d2624c008be44d 480 Pfam PF14052 Capsule assembly protein Wzi 88 466 2.4E-114 T 11-10-2018 IPR026950 Capsule assembly protein Wzi AYJ52_08265 d6138bd52641d5987bf182c07cdea11b 293 Pfam PF05425 Copper resistance protein D 189 283 2.0E-12 T 11-10-2018 IPR008457 Copper resistance protein D GO:0016021 AYJ52_18485 45f7aacbe2a1daf286d1ec0521e57fbb 348 Pfam PF03060 Nitronate monooxygenase 5 342 6.6E-68 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AYJ52_18485 45f7aacbe2a1daf286d1ec0521e57fbb 348 Gene3D G3DSA:3.20.20.70 1 344 1.3E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_18485 45f7aacbe2a1daf286d1ec0521e57fbb 348 SUPERFAMILY SSF51412 3 343 6.56E-57 T 11-10-2018 AYJ52_18285 1db3c4f1cc31179b3f2b9b8a75ceaca6 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_18285 1db3c4f1cc31179b3f2b9b8a75ceaca6 476 SUPERFAMILY SSF53720 5 473 2.88E-153 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_18285 1db3c4f1cc31179b3f2b9b8a75ceaca6 476 Pfam PF00171 Aldehyde dehydrogenase family 22 466 2.3E-152 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_18285 1db3c4f1cc31179b3f2b9b8a75ceaca6 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_18285 1db3c4f1cc31179b3f2b9b8a75ceaca6 476 Gene3D G3DSA:3.40.605.10 25 467 2.1E-163 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_18285 1db3c4f1cc31179b3f2b9b8a75ceaca6 476 Gene3D G3DSA:3.40.309.10 254 443 2.1E-163 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_12670 2ce49519aed1b13c7f6277a097646094 496 SMART SM00345 27 86 3.2E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12670 2ce49519aed1b13c7f6277a097646094 496 SUPERFAMILY SSF53383 116 492 1.97E-83 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_12670 2ce49519aed1b13c7f6277a097646094 496 Gene3D G3DSA:1.10.10.10 13 93 1.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12670 2ce49519aed1b13c7f6277a097646094 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.8E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12670 2ce49519aed1b13c7f6277a097646094 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.8E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12670 2ce49519aed1b13c7f6277a097646094 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 86 1.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12670 2ce49519aed1b13c7f6277a097646094 496 Pfam PF00155 Aminotransferase class I and II 163 354 2.6E-15 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_12670 2ce49519aed1b13c7f6277a097646094 496 SUPERFAMILY SSF46785 21 88 8.44E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12670 2ce49519aed1b13c7f6277a097646094 496 Gene3D G3DSA:3.40.640.10 122 484 2.3E-107 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_06475 399360e25c079e19d3f5206ade2d4cdb 208 Pfam PF00293 NUDIX domain 55 188 7.7E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_06475 399360e25c079e19d3f5206ade2d4cdb 208 Gene3D G3DSA:3.90.79.10 4 205 6.4E-54 T 11-10-2018 AYJ52_06475 399360e25c079e19d3f5206ade2d4cdb 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 13 196 7.4E-44 T 11-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AYJ52_06475 399360e25c079e19d3f5206ade2d4cdb 208 SUPERFAMILY SSF55811 18 199 4.06E-41 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_06475 399360e25c079e19d3f5206ade2d4cdb 208 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AYJ52_15230 f7beb26738b3d77d095ef8d6da96d225 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 110 117 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AYJ52_15230 f7beb26738b3d77d095ef8d6da96d225 238 Gene3D G3DSA:3.90.550.10 6 237 3.0E-67 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_15230 f7beb26738b3d77d095ef8d6da96d225 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 235 2.2E-61 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AYJ52_15230 f7beb26738b3d77d095ef8d6da96d225 238 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 12 234 39.314 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AYJ52_15230 f7beb26738b3d77d095ef8d6da96d225 238 SUPERFAMILY SSF53448 13 235 2.25E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_15230 f7beb26738b3d77d095ef8d6da96d225 238 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 234 1.6E-65 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AYJ52_12545 8553193f930dcf0bd4ed20b5366ea0b1 203 SUPERFAMILY SSF51306 72 198 3.84E-30 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AYJ52_12545 8553193f930dcf0bd4ed20b5366ea0b1 203 Gene3D G3DSA:2.10.109.10 84 202 4.8E-39 T 11-10-2018 AYJ52_12545 8553193f930dcf0bd4ed20b5366ea0b1 203 Pfam PF00717 Peptidase S24-like 116 184 3.0E-11 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AYJ52_05915 a045557b73926523639160ab5a68ec28 176 Pfam PF01327 Polypeptide deformylase 5 153 1.1E-52 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_05915 a045557b73926523639160ab5a68ec28 176 PIRSF PIRSF004749 1 175 9.2E-58 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_05915 a045557b73926523639160ab5a68ec28 176 PRINTS PR01576 Peptide deformylase signature 121 150 8.5E-38 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_05915 a045557b73926523639160ab5a68ec28 176 PRINTS PR01576 Peptide deformylase signature 33 62 8.5E-38 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_05915 a045557b73926523639160ab5a68ec28 176 PRINTS PR01576 Peptide deformylase signature 102 120 8.5E-38 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_05915 a045557b73926523639160ab5a68ec28 176 PRINTS PR01576 Peptide deformylase signature 90 101 8.5E-38 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_05915 a045557b73926523639160ab5a68ec28 176 SUPERFAMILY SSF56420 3 165 1.28E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily AYJ52_05915 a045557b73926523639160ab5a68ec28 176 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 161 7.0E-59 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_05915 a045557b73926523639160ab5a68ec28 176 Gene3D G3DSA:3.90.45.10 1 168 2.7E-66 T 11-10-2018 IPR036821 Peptide deformylase superfamily AYJ52_05915 a045557b73926523639160ab5a68ec28 176 Hamap MF_00163 Peptide deformylase [def]. 2 163 31.85 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_02105 5a6f7e6790f208d670f05e2767731361 138 Pfam PF03061 Thioesterase superfamily 27 99 5.1E-16 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AYJ52_02105 5a6f7e6790f208d670f05e2767731361 138 Gene3D G3DSA:3.10.129.10 1 138 6.5E-37 T 11-10-2018 AYJ52_02105 5a6f7e6790f208d670f05e2767731361 138 SUPERFAMILY SSF54637 8 134 5.34E-33 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_12400 6966d57db10ca2db8acdae86a895cd74 600 SUPERFAMILY SSF56645 41 280 1.57E-58 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_12400 6966d57db10ca2db8acdae86a895cd74 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 29 2.7E-10 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AYJ52_12400 6966d57db10ca2db8acdae86a895cd74 600 SUPERFAMILY SSF47203 288 476 1.77E-46 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_12400 6966d57db10ca2db8acdae86a895cd74 600 Gene3D G3DSA:2.40.110.10 162 287 2.5E-28 T 11-10-2018 AYJ52_12400 6966d57db10ca2db8acdae86a895cd74 600 Gene3D G3DSA:1.10.540.10 16 160 4.1E-22 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_12400 6966d57db10ca2db8acdae86a895cd74 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 470 594 7.5E-35 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AYJ52_12400 6966d57db10ca2db8acdae86a895cd74 600 Gene3D G3DSA:1.20.140.10 288 459 3.0E-41 T 11-10-2018 AYJ52_12400 6966d57db10ca2db8acdae86a895cd74 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 454 2.0E-19 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_12400 6966d57db10ca2db8acdae86a895cd74 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 273 9.0E-17 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_12400 6966d57db10ca2db8acdae86a895cd74 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 158 2.3E-18 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 263 277 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 SUPERFAMILY SSF51905 4 539 3.89E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 Gene3D G3DSA:4.10.450.10 39 202 2.7E-174 T 11-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 Pfam PF05199 GMC oxidoreductase 397 531 9.7E-41 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 Gene3D G3DSA:3.50.50.60 5 535 2.7E-174 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 85 108 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 Pfam PF00732 GMC oxidoreductase 6 304 3.8E-98 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 4 552 59.8 T 11-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 TIGRFAM TIGR01810 betA: choline dehydrogenase 7 541 1.4E-283 T 11-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 Gene3D G3DSA:3.30.410.40 155 478 2.7E-174 T 11-10-2018 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 Gene3D G3DSA:1.10.1220.110 100 154 2.7E-174 T 11-10-2018 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 PIRSF PIRSF000137 1 543 6.0E-138 T 11-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AYJ52_10060 97b22f8d1be2d03f1e53a3fd9c35bb99 552 SUPERFAMILY SSF54373 299 481 1.67E-64 T 11-10-2018 AYJ52_06490 b80f00f1469f51ed1fbad0a6fc71e1e5 193 SUPERFAMILY SSF46689 3 75 3.49E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_06490 b80f00f1469f51ed1fbad0a6fc71e1e5 193 Gene3D G3DSA:1.10.357.10 2 190 2.8E-47 T 11-10-2018 AYJ52_06490 b80f00f1469f51ed1fbad0a6fc71e1e5 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 8.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_06490 b80f00f1469f51ed1fbad0a6fc71e1e5 193 SUPERFAMILY SSF48498 77 186 2.59E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_06490 b80f00f1469f51ed1fbad0a6fc71e1e5 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 1.2E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_06490 b80f00f1469f51ed1fbad0a6fc71e1e5 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 1.2E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.4E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.4E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.4E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 SUPERFAMILY SSF74731 3 117 1.7E-47 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 Pfam PF00453 Ribosomal protein L20 3 109 2.4E-46 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.7E-47 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 Gene3D G3DSA:1.10.1900.20 56 118 2.2E-25 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-22 T 11-10-2018 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 Gene3D G3DSA:1.10.720.90 2 55 3.9E-24 T 11-10-2018 AYJ52_08535 0ed2fefc10a3d0fcfb8b75de94290366 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.472 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00600 a69d6c9cae38263081340b292c1dca1c 283 SUPERFAMILY SSF51717 11 282 4.71E-98 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_00600 a69d6c9cae38263081340b292c1dca1c 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 25 40 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_00600 a69d6c9cae38263081340b292c1dca1c 283 Pfam PF00809 Pterin binding enzyme 26 265 5.8E-81 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_00600 a69d6c9cae38263081340b292c1dca1c 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 59 72 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_00600 a69d6c9cae38263081340b292c1dca1c 283 Gene3D G3DSA:3.20.20.20 4 283 2.5E-110 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_00600 a69d6c9cae38263081340b292c1dca1c 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 25 280 4.8E-95 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AYJ52_15010 97c1f4b4faabd6c0b59b34d9d4fd3b4c 217 SUPERFAMILY SSF100950 8 213 2.16E-64 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_15010 97c1f4b4faabd6c0b59b34d9d4fd3b4c 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 AYJ52_15010 97c1f4b4faabd6c0b59b34d9d4fd3b4c 217 SMART SM00882 9 206 4.2E-65 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_15010 97c1f4b4faabd6c0b59b34d9d4fd3b4c 217 Pfam PF01144 Coenzyme A transferase 9 204 9.2E-39 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_15010 97c1f4b4faabd6c0b59b34d9d4fd3b4c 217 Gene3D G3DSA:3.40.1080.10 4 216 1.0E-85 T 11-10-2018 AYJ52_15010 97c1f4b4faabd6c0b59b34d9d4fd3b4c 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 1.8E-89 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AYJ52_12695 21e3dfdeb205dc52924f2d64576acaef 304 Pfam PF03466 LysR substrate binding domain 92 299 4.9E-39 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12695 21e3dfdeb205dc52924f2d64576acaef 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12695 21e3dfdeb205dc52924f2d64576acaef 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12695 21e3dfdeb205dc52924f2d64576acaef 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12695 21e3dfdeb205dc52924f2d64576acaef 304 Gene3D G3DSA:3.40.190.10 165 270 1.0E-58 T 11-10-2018 AYJ52_12695 21e3dfdeb205dc52924f2d64576acaef 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 4.8E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12695 21e3dfdeb205dc52924f2d64576acaef 304 SUPERFAMILY SSF46785 7 116 5.99E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12695 21e3dfdeb205dc52924f2d64576acaef 304 Gene3D G3DSA:1.10.10.10 5 95 8.6E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12695 21e3dfdeb205dc52924f2d64576acaef 304 SUPERFAMILY SSF53850 93 303 1.36E-42 T 11-10-2018 AYJ52_12695 21e3dfdeb205dc52924f2d64576acaef 304 Gene3D G3DSA:3.40.190.10 105 296 1.0E-58 T 11-10-2018 AYJ52_11650 674ad484b05871c6ccd20aeb12096c7a 325 Gene3D G3DSA:3.10.580.10 196 322 1.7E-44 T 11-10-2018 AYJ52_11650 674ad484b05871c6ccd20aeb12096c7a 325 Pfam PF01380 SIS domain 41 172 4.7E-27 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AYJ52_11650 674ad484b05871c6ccd20aeb12096c7a 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 314 3.4E-106 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AYJ52_11650 674ad484b05871c6ccd20aeb12096c7a 325 SMART SM00116 276 324 0.0026 T 11-10-2018 IPR000644 CBS domain AYJ52_11650 674ad484b05871c6ccd20aeb12096c7a 325 SMART SM00116 210 258 0.011 T 11-10-2018 IPR000644 CBS domain AYJ52_11650 674ad484b05871c6ccd20aeb12096c7a 325 PIRSF PIRSF004692 1 325 1.4E-133 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AYJ52_11650 674ad484b05871c6ccd20aeb12096c7a 325 SUPERFAMILY SSF53697 14 322 9.12E-66 T 11-10-2018 AYJ52_11650 674ad484b05871c6ccd20aeb12096c7a 325 Pfam PF00571 CBS domain 269 322 2.1E-10 T 11-10-2018 IPR000644 CBS domain AYJ52_11650 674ad484b05871c6ccd20aeb12096c7a 325 Pfam PF00571 CBS domain 201 258 2.1E-6 T 11-10-2018 IPR000644 CBS domain AYJ52_11650 674ad484b05871c6ccd20aeb12096c7a 325 Gene3D G3DSA:3.40.50.10490 5 195 2.2E-58 T 11-10-2018 AYJ52_01750 75ecbaf6f8a7860369770d031b021672 436 SUPERFAMILY SSF103473 16 431 2.62E-64 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_01750 75ecbaf6f8a7860369770d031b021672 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 301 316 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_01750 75ecbaf6f8a7860369770d031b021672 436 Gene3D G3DSA:1.20.1250.20 16 435 5.2E-65 T 11-10-2018 AYJ52_01750 75ecbaf6f8a7860369770d031b021672 436 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 27 418 4.9E-139 T 11-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 AYJ52_01750 75ecbaf6f8a7860369770d031b021672 436 Pfam PF07690 Major Facilitator Superfamily 292 429 8.3E-9 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_01750 75ecbaf6f8a7860369770d031b021672 436 Pfam PF00083 Sugar (and other) transporter 22 229 1.1E-23 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 SUPERFAMILY SSF56655 1 272 1.24E-74 T 11-10-2018 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 Gene3D G3DSA:3.40.190.80 145 271 5.8E-32 T 11-10-2018 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 Pfam PF00459 Inositol monophosphatase family 2 263 4.9E-65 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 PRINTS PR01959 SuhB family inositol monophosphatase signature 208 220 2.5E-12 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 PRINTS PR01959 SuhB family inositol monophosphatase signature 108 127 2.5E-12 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 2.7E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 218 242 2.7E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 2.7E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 2.7E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 2.7E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 187 208 2.7E-49 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 Gene3D G3DSA:3.30.540.10 1 144 4.4E-45 T 11-10-2018 AYJ52_02820 3c7746d8c27a2896f55de49b514e84df 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 221 235 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AYJ52_14330 6b5e61ee793a1357b5f800235b472db0 388 Gene3D G3DSA:2.40.420.20 299 367 8.4E-94 T 11-10-2018 AYJ52_14330 6b5e61ee793a1357b5f800235b472db0 388 Gene3D G3DSA:2.40.50.100 60 204 8.4E-94 T 11-10-2018 AYJ52_14330 6b5e61ee793a1357b5f800235b472db0 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 288 7.5E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_14330 6b5e61ee793a1357b5f800235b472db0 388 Gene3D G3DSA:2.40.30.170 49 298 8.4E-94 T 11-10-2018 AYJ52_14330 6b5e61ee793a1357b5f800235b472db0 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 369 4.5E-78 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_14330 6b5e61ee793a1357b5f800235b472db0 388 SUPERFAMILY SSF111369 50 293 5.1E-70 T 11-10-2018 AYJ52_14330 6b5e61ee793a1357b5f800235b472db0 388 Gene3D G3DSA:1.10.287.470 95 168 8.4E-94 T 11-10-2018 AYJ52_13235 742afc7e4f51498a4f7d57726e314b0d 273 SUPERFAMILY SSF56601 47 266 2.18E-30 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_13235 742afc7e4f51498a4f7d57726e314b0d 273 Gene3D G3DSA:3.40.710.10 25 273 1.1E-87 T 11-10-2018 AYJ52_13235 742afc7e4f51498a4f7d57726e314b0d 273 Pfam PF00905 Penicillin binding protein transpeptidase domain 47 265 3.8E-29 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AYJ52_06815 1964bf00a5cec7118f94ceb1aeebd6d6 146 Pfam PF03652 Holliday junction resolvase 8 138 1.3E-34 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AYJ52_06815 1964bf00a5cec7118f94ceb1aeebd6d6 146 Gene3D G3DSA:3.30.420.140 5 140 1.1E-34 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AYJ52_06815 1964bf00a5cec7118f94ceb1aeebd6d6 146 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 10 138 1.7E-33 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AYJ52_06815 1964bf00a5cec7118f94ceb1aeebd6d6 146 SMART SM00732 7 107 6.5E-25 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AYJ52_06815 1964bf00a5cec7118f94ceb1aeebd6d6 146 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 7 142 21.086 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AYJ52_06815 1964bf00a5cec7118f94ceb1aeebd6d6 146 SUPERFAMILY SSF53098 7 139 2.73E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_06340 a3d03266c57ddbf63cdbf7627b9763ea 361 Gene3D G3DSA:3.40.140.10 1 144 3.6E-50 T 11-10-2018 AYJ52_06340 a3d03266c57ddbf63cdbf7627b9763ea 361 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 103 6.2E-23 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AYJ52_06340 a3d03266c57ddbf63cdbf7627b9763ea 361 Gene3D G3DSA:3.40.430.10 145 361 3.6E-71 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AYJ52_06340 a3d03266c57ddbf63cdbf7627b9763ea 361 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AYJ52_06340 a3d03266c57ddbf63cdbf7627b9763ea 361 SUPERFAMILY SSF53597 148 352 4.46E-52 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AYJ52_06340 a3d03266c57ddbf63cdbf7627b9763ea 361 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 353 7.9E-51 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AYJ52_06340 a3d03266c57ddbf63cdbf7627b9763ea 361 PIRSF PIRSF006769 2 359 6.2E-123 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AYJ52_06340 a3d03266c57ddbf63cdbf7627b9763ea 361 Pfam PF01872 RibD C-terminal domain 151 350 1.2E-42 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AYJ52_06340 a3d03266c57ddbf63cdbf7627b9763ea 361 SUPERFAMILY SSF53927 7 148 5.02E-49 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AYJ52_06340 a3d03266c57ddbf63cdbf7627b9763ea 361 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 351 2.3E-118 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AYJ52_06480 ef555fedcbbb393ab40b1c78a239ffb1 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 142 592 101.32 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AYJ52_06480 ef555fedcbbb393ab40b1c78a239ffb1 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 142 590 1.7E-220 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AYJ52_06480 ef555fedcbbb393ab40b1c78a239ffb1 625 Pfam PF01964 Radical SAM ThiC family 143 587 8.1E-206 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AYJ52_06480 ef555fedcbbb393ab40b1c78a239ffb1 625 Gene3D G3DSA:3.20.20.540 211 523 2.1E-156 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AYJ52_06480 ef555fedcbbb393ab40b1c78a239ffb1 625 Pfam PF13667 ThiC-associated domain 27 102 2.1E-33 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AYJ52_00225 f727533d9194fe407118bb749eccaeec 355 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AYJ52_00225 f727533d9194fe407118bb749eccaeec 355 Pfam PF11890 Domain of unknown function (DUF3410) 298 349 4.6E-13 T 11-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 AYJ52_00225 f727533d9194fe407118bb749eccaeec 355 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 253 4.1E-33 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AYJ52_00225 f727533d9194fe407118bb749eccaeec 355 Gene3D G3DSA:3.40.50.720 2 272 3.5E-106 T 11-10-2018 AYJ52_00225 f727533d9194fe407118bb749eccaeec 355 SUPERFAMILY SSF51735 91 254 2.42E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_00225 f727533d9194fe407118bb749eccaeec 355 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 270 1.4E-18 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AYJ52_00225 f727533d9194fe407118bb749eccaeec 355 Gene3D G3DSA:3.30.1370.170 291 350 8.2E-12 T 11-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 AYJ52_00225 f727533d9194fe407118bb749eccaeec 355 Gene3D G3DSA:3.40.50.720 92 254 3.5E-106 T 11-10-2018 AYJ52_00225 f727533d9194fe407118bb749eccaeec 355 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 355 40.834 T 11-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 AYJ52_00225 f727533d9194fe407118bb749eccaeec 355 SUPERFAMILY SSF52283 30 111 1.25E-17 T 11-10-2018 AYJ52_19390 f6ee6c7da583f3f334cd51e81731e74b 429 Gene3D G3DSA:2.30.40.20 14 77 3.4E-37 T 11-10-2018 AYJ52_19390 f6ee6c7da583f3f334cd51e81731e74b 429 Pfam PF00817 impB/mucB/samB family 9 156 2.8E-33 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AYJ52_19390 f6ee6c7da583f3f334cd51e81731e74b 429 Gene3D G3DSA:3.30.70.270 8 163 3.4E-37 T 11-10-2018 AYJ52_19390 f6ee6c7da583f3f334cd51e81731e74b 429 Pfam PF11799 impB/mucB/samB family C-terminal domain 249 363 9.7E-11 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AYJ52_19390 f6ee6c7da583f3f334cd51e81731e74b 429 SUPERFAMILY SSF56672 4 245 1.96E-60 T 11-10-2018 AYJ52_19390 f6ee6c7da583f3f334cd51e81731e74b 429 Gene3D G3DSA:1.10.150.20 179 237 4.4E-8 T 11-10-2018 AYJ52_03270 638375a1885d0bc8768149b0296a48fb 853 Pfam PF00912 Transglycosylase 62 235 3.8E-61 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_03270 638375a1885d0bc8768149b0296a48fb 853 SUPERFAMILY SSF53955 54 262 4.22E-75 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_03270 638375a1885d0bc8768149b0296a48fb 853 Gene3D G3DSA:1.10.3810.10 55 249 1.1E-74 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_03270 638375a1885d0bc8768149b0296a48fb 853 SUPERFAMILY SSF56601 217 762 1.37E-122 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_03270 638375a1885d0bc8768149b0296a48fb 853 Pfam PF17092 Penicillin-binding protein OB-like domain 325 419 3.8E-20 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_03270 638375a1885d0bc8768149b0296a48fb 853 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 74 751 2.0E-180 T 11-10-2018 AYJ52_03270 638375a1885d0bc8768149b0296a48fb 853 Gene3D G3DSA:2.40.50.140 322 416 8.1E-30 T 11-10-2018 AYJ52_03270 638375a1885d0bc8768149b0296a48fb 853 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 596 7.2E-26 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AYJ52_19430 da827fddfa0ae39150b0079af2e1eace 449 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 131 3.6E-8 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain AYJ52_19430 da827fddfa0ae39150b0079af2e1eace 449 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 35 77 4.9E-7 T 11-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger AYJ52_19430 da827fddfa0ae39150b0079af2e1eace 449 Pfam PF01610 Transposase 148 381 4.6E-51 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AYJ52_11505 538f6e081fc8c4ab71294c2542cfb114 269 SUPERFAMILY SSF48179 156 262 1.28E-26 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_11505 538f6e081fc8c4ab71294c2542cfb114 269 Gene3D G3DSA:1.10.3730.10 159 264 1.2E-30 T 11-10-2018 AYJ52_11505 538f6e081fc8c4ab71294c2542cfb114 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 7 260 20.418 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AYJ52_11505 538f6e081fc8c4ab71294c2542cfb114 269 PIRSF PIRSF000193 6 263 3.7E-53 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AYJ52_11505 538f6e081fc8c4ab71294c2542cfb114 269 SUPERFAMILY SSF51735 8 152 9.63E-13 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_11505 538f6e081fc8c4ab71294c2542cfb114 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 156 259 1.6E-26 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AYJ52_11505 538f6e081fc8c4ab71294c2542cfb114 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 93 1.5E-7 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AYJ52_11505 538f6e081fc8c4ab71294c2542cfb114 269 Gene3D G3DSA:3.40.50.720 2 158 1.6E-25 T 11-10-2018 AYJ52_19545 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF12848 ABC transporter 167 283 5.1E-9 T 11-10-2018 IPR032781 ABC-transporter extension domain AYJ52_19545 5418973fc0e6b837c762acaac063f2e8 491 SUPERFAMILY SSF52540 288 485 2.59E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_19545 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF00005 ABC transporter 313 436 5.3E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_19545 5418973fc0e6b837c762acaac063f2e8 491 SUPERFAMILY SSF52540 3 189 1.88E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_19545 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 63 234 1.9E-28 T 11-10-2018 AYJ52_19545 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 289 490 2.2E-41 T 11-10-2018 AYJ52_19545 5418973fc0e6b837c762acaac063f2e8 491 Pfam PF00005 ABC transporter 24 56 9.4E-6 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_19545 5418973fc0e6b837c762acaac063f2e8 491 Gene3D G3DSA:3.40.50.300 4 62 3.7E-8 T 11-10-2018 AYJ52_19545 5418973fc0e6b837c762acaac063f2e8 491 SMART SM00382 321 488 4.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_19545 5418973fc0e6b837c762acaac063f2e8 491 SMART SM00382 29 173 4.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 Gene3D G3DSA:2.102.10.10 50 174 1.6E-101 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 199 392 1.8E-10 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 SUPERFAMILY SSF50022 19 163 1.44E-46 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 93 116 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 Gene3D G3DSA:3.90.380.10 28 446 1.6E-101 T 11-10-2018 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 65 80 9.6E-35 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 107 127 9.6E-35 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 192 214 9.6E-35 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 86 106 9.6E-35 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 35 60 9.6E-35 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 9.6E-35 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 SUPERFAMILY SSF55961 169 456 2.83E-55 T 11-10-2018 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 TIGRFAM TIGR03228 anthran_1_2_A: anthranilate 1,2-dioxygenase, large subunit 13 450 7.0E-289 T 11-10-2018 IPR017638 Anthranilate 1,2-dioxygenase, large subunit KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 AYJ52_14240 9ea3e26458123f2961a81b308622ec0a 471 Pfam PF00355 Rieske [2Fe-2S] domain 51 134 4.4E-23 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AYJ52_12730 a9e628e534f0986cdb9b86899026fa06 310 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 4 299 3.4E-102 T 11-10-2018 IPR017554 Malonate decarboxylase, McdH subunit AYJ52_12730 a9e628e534f0986cdb9b86899026fa06 310 SUPERFAMILY SSF52151 4 291 1.44E-49 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AYJ52_12730 a9e628e534f0986cdb9b86899026fa06 310 Gene3D G3DSA:3.40.366.10 5 280 5.0E-66 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AYJ52_12730 a9e628e534f0986cdb9b86899026fa06 310 Gene3D G3DSA:3.30.70.250 121 190 5.0E-66 T 11-10-2018 AYJ52_12730 a9e628e534f0986cdb9b86899026fa06 310 SUPERFAMILY SSF55048 123 183 1.14E-11 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AYJ52_12730 a9e628e534f0986cdb9b86899026fa06 310 PIRSF PIRSF000446 1 304 1.1E-61 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AYJ52_12730 a9e628e534f0986cdb9b86899026fa06 310 Pfam PF00698 Acyl transferase domain 4 284 3.5E-29 T 11-10-2018 IPR014043 Acyl transferase AYJ52_12730 a9e628e534f0986cdb9b86899026fa06 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 293 1.3E-18 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AYJ52_11190 0b5d019fc198e0da4a39b716abd59333 349 Gene3D G3DSA:3.20.20.100 1 349 4.2E-124 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AYJ52_11190 0b5d019fc198e0da4a39b716abd59333 349 Pfam PF00248 Aldo/keto reductase family 15 340 1.9E-68 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AYJ52_11190 0b5d019fc198e0da4a39b716abd59333 349 PRINTS PR00069 Aldo-keto reductase signature 116 134 1.2E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AYJ52_11190 0b5d019fc198e0da4a39b716abd59333 349 PRINTS PR00069 Aldo-keto reductase signature 167 184 1.2E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AYJ52_11190 0b5d019fc198e0da4a39b716abd59333 349 SUPERFAMILY SSF51430 1 347 3.27E-104 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AYJ52_01040 a06f6a8ed7c9aee9f3e72e3d49928df0 305 Pfam PF01734 Patatin-like phospholipase 41 198 3.0E-24 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AYJ52_01040 a06f6a8ed7c9aee9f3e72e3d49928df0 305 Gene3D G3DSA:3.40.1090.10 24 137 1.2E-24 T 11-10-2018 AYJ52_01040 a06f6a8ed7c9aee9f3e72e3d49928df0 305 SUPERFAMILY SSF52151 36 282 3.14E-57 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AYJ52_01040 a06f6a8ed7c9aee9f3e72e3d49928df0 305 Gene3D G3DSA:3.40.1090.20 159 211 3.3E-5 T 11-10-2018 AYJ52_11990 4663013cd6e68b6fff59ac616e463c2c 340 Pfam PF09084 NMT1/THI5 like 57 252 2.9E-14 T 11-10-2018 IPR015168 SsuA/THI5-like AYJ52_11990 4663013cd6e68b6fff59ac616e463c2c 340 Gene3D G3DSA:3.40.190.10 28 138 5.4E-11 T 11-10-2018 AYJ52_11990 4663013cd6e68b6fff59ac616e463c2c 340 Gene3D G3DSA:3.40.190.10 147 339 2.8E-19 T 11-10-2018 AYJ52_11990 4663013cd6e68b6fff59ac616e463c2c 340 SUPERFAMILY SSF53850 39 254 2.05E-33 T 11-10-2018 AYJ52_02430 2e3947f0f03a682a37f1130239471df9 294 SUPERFAMILY SSF74653 190 287 2.06E-16 T 11-10-2018 AYJ52_02430 2e3947f0f03a682a37f1130239471df9 294 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 209 286 6.1E-14 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AYJ52_02430 2e3947f0f03a682a37f1130239471df9 294 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 207 285 5.4E-13 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AYJ52_02190 402c1c850de909fff3df91f0feff3b6c 541 SUPERFAMILY SSF56024 38 263 1.32E-43 T 11-10-2018 AYJ52_02190 402c1c850de909fff3df91f0feff3b6c 541 Pfam PF13091 PLD-like domain 94 242 1.5E-16 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AYJ52_02190 402c1c850de909fff3df91f0feff3b6c 541 Pfam PF13091 PLD-like domain 331 485 1.7E-20 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AYJ52_02190 402c1c850de909fff3df91f0feff3b6c 541 Gene3D G3DSA:3.30.870.10 306 508 1.1E-36 T 11-10-2018 AYJ52_02190 402c1c850de909fff3df91f0feff3b6c 541 SUPERFAMILY SSF56024 327 505 5.69E-29 T 11-10-2018 AYJ52_02190 402c1c850de909fff3df91f0feff3b6c 541 Gene3D G3DSA:3.30.870.10 74 269 1.5E-37 T 11-10-2018 AYJ52_02190 402c1c850de909fff3df91f0feff3b6c 541 SMART SM00155 183 210 2.2E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AYJ52_02190 402c1c850de909fff3df91f0feff3b6c 541 SMART SM00155 433 459 2.6E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AYJ52_02640 7565f0bba13127ad8763ed80e9ed9605 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02640 7565f0bba13127ad8763ed80e9ed9605 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.999 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AYJ52_02640 7565f0bba13127ad8763ed80e9ed9605 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.5E-54 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AYJ52_02640 7565f0bba13127ad8763ed80e9ed9605 122 SMART SM01374 1 122 9.2E-85 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AYJ52_02640 7565f0bba13127ad8763ed80e9ed9605 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.3E-57 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AYJ52_02640 7565f0bba13127ad8763ed80e9ed9605 122 Gene3D G3DSA:2.40.150.20 1 122 6.2E-54 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_02640 7565f0bba13127ad8763ed80e9ed9605 122 SUPERFAMILY SSF50193 1 122 6.28E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_14235 8d0e52893bcdbe111dd0ef99e96b6ce0 163 Pfam PF00866 Ring hydroxylating beta subunit 16 155 1.6E-41 T 11-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 AYJ52_14235 8d0e52893bcdbe111dd0ef99e96b6ce0 163 TIGRFAM TIGR03231 anthran_1_2_B: anthranilate 1,2-dioxygenase, small subunit 9 163 2.0E-88 T 11-10-2018 IPR017640 Anthranilate 1,2-dioxygenase, small subunit GO:0019439 KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 AYJ52_14235 8d0e52893bcdbe111dd0ef99e96b6ce0 163 SUPERFAMILY SSF54427 1 162 5.0E-44 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_14235 8d0e52893bcdbe111dd0ef99e96b6ce0 163 Gene3D G3DSA:3.10.450.50 6 163 9.4E-40 T 11-10-2018 AYJ52_09825 d9510d7d5c940eeb5a34b8161d1b3d44 151 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 123 4.9E-30 T 11-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AYJ52_09825 d9510d7d5c940eeb5a34b8161d1b3d44 151 Pfam PF01814 Hemerythrin HHE cation binding domain 12 124 1.5E-8 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AYJ52_09825 d9510d7d5c940eeb5a34b8161d1b3d44 151 Gene3D G3DSA:1.20.120.50 1 127 5.7E-31 T 11-10-2018 IPR035938 Hemerythrin-like superfamily AYJ52_09825 d9510d7d5c940eeb5a34b8161d1b3d44 151 SUPERFAMILY SSF47188 2 124 1.44E-27 T 11-10-2018 IPR035938 Hemerythrin-like superfamily AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 Pfam PF00009 Elongation factor Tu GTP binding domain 5 202 4.9E-52 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 Gene3D G3DSA:2.40.30.10 207 307 1.4E-35 T 11-10-2018 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 Pfam PF03144 Elongation factor Tu domain 2 227 297 3.9E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 Pfam PF00679 Elongation factor G C-terminus 405 485 9.1E-24 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 SUPERFAMILY SSF54980 406 521 1.34E-28 T 11-10-2018 IPR035647 EF-G domain III/V-like AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 Gene3D G3DSA:3.30.70.240 397 490 1.0E-132 T 11-10-2018 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 Gene3D G3DSA:3.40.50.300 3 206 8.0E-63 T 11-10-2018 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 147 5.7E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 SMART SM00838 406 491 0.0019 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 607 1.7E-284 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 Gene3D G3DSA:3.30.70.870 314 598 1.0E-132 T 11-10-2018 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 Gene3D G3DSA:2.40.50.250 491 607 1.0E-132 T 11-10-2018 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 SUPERFAMILY SSF54980 310 395 2.09E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 SUPERFAMILY SSF52540 4 227 1.87E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 PRINTS PR00315 GTP-binding elongation factor signature 53 61 1.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_01635 0580ed5bc3da3540baca8a5de2ea132a 611 SUPERFAMILY SSF50447 159 307 2.29E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_03930 628ed6a2929ab2fd09e0713d1ec0c35e 325 SUPERFAMILY SSF51735 113 287 1.13E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_03930 628ed6a2929ab2fd09e0713d1ec0c35e 325 SUPERFAMILY SSF50129 1 144 8.37E-32 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_03930 628ed6a2929ab2fd09e0713d1ec0c35e 325 Gene3D G3DSA:3.40.50.720 122 293 1.5E-87 T 11-10-2018 AYJ52_03930 628ed6a2929ab2fd09e0713d1ec0c35e 325 SMART SM00829 11 323 1.1E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AYJ52_03930 628ed6a2929ab2fd09e0713d1ec0c35e 325 Gene3D G3DSA:3.90.180.10 4 310 1.5E-87 T 11-10-2018 AYJ52_03930 628ed6a2929ab2fd09e0713d1ec0c35e 325 Pfam PF00107 Zinc-binding dehydrogenase 151 266 2.9E-13 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AYJ52_03930 628ed6a2929ab2fd09e0713d1ec0c35e 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 2.2E-9 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 PIRSF PIRSF004557 9 445 8.7E-120 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 SUPERFAMILY SSF103491 9 430 3.53E-126 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 ProSitePatterns PS00755 Protein secY signature 1. 81 100 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 121 144 2.8E-91 T 11-10-2018 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 2.8E-91 T 11-10-2018 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 2.8E-91 T 11-10-2018 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 2.8E-91 T 11-10-2018 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 28 46 2.8E-91 T 11-10-2018 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 2.8E-91 T 11-10-2018 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 2.8E-91 T 11-10-2018 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 80 100 2.8E-91 T 11-10-2018 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 2.8E-91 T 11-10-2018 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 Gene3D G3DSA:1.10.3370.10 12 435 1.6E-156 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 26 435 6.4E-124 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 Pfam PF00344 SecY translocase 81 423 1.1E-111 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AYJ52_02590 96651fc6ceea6cb55b8122f5ac054cf4 450 Hamap MF_01465 Protein translocase subunit SecY [secY]. 15 439 28.29 T 11-10-2018 IPR026593 Protein translocase subunit SecY AYJ52_01565 0ca50cf4a75e2759e19d1e636943cc12 278 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 148 269 2.7E-35 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AYJ52_01565 0ca50cf4a75e2759e19d1e636943cc12 278 Gene3D G3DSA:3.40.50.720 1 144 2.7E-36 T 11-10-2018 AYJ52_01565 0ca50cf4a75e2759e19d1e636943cc12 278 SUPERFAMILY SSF51735 1 146 2.63E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_01565 0ca50cf4a75e2759e19d1e636943cc12 278 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 1 145 2.6E-33 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AYJ52_01565 0ca50cf4a75e2759e19d1e636943cc12 278 PIRSF PIRSF000103 1 277 1.6E-53 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AYJ52_01565 0ca50cf4a75e2759e19d1e636943cc12 278 Gene3D G3DSA:1.10.1040.10 145 277 2.6E-30 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AYJ52_01565 0ca50cf4a75e2759e19d1e636943cc12 278 SUPERFAMILY SSF48179 148 276 1.13E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_08665 8d28b54163bfa1bce0564bf563ba39d8 292 PRINTS PR01805 VacJ lipoprotein signature 177 194 3.2E-17 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AYJ52_08665 8d28b54163bfa1bce0564bf563ba39d8 292 PRINTS PR01805 VacJ lipoprotein signature 91 107 3.2E-17 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AYJ52_08665 8d28b54163bfa1bce0564bf563ba39d8 292 PRINTS PR01805 VacJ lipoprotein signature 74 87 3.2E-17 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AYJ52_08665 8d28b54163bfa1bce0564bf563ba39d8 292 PRINTS PR01805 VacJ lipoprotein signature 142 159 3.2E-17 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AYJ52_08665 8d28b54163bfa1bce0564bf563ba39d8 292 Pfam PF04333 MlaA lipoprotein 73 263 3.5E-62 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AYJ52_03740 e09427102fba178d9e942f1abe984c80 84 SUPERFAMILY SSF47413 8 72 1.66E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_03740 e09427102fba178d9e942f1abe984c80 84 SMART SM00530 16 71 2.9E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_03740 e09427102fba178d9e942f1abe984c80 84 Gene3D G3DSA:1.10.260.40 1 81 5.1E-30 T 11-10-2018 AYJ52_03740 e09427102fba178d9e942f1abe984c80 84 Pfam PF01381 Helix-turn-helix 17 70 1.3E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_10460 7d53e961b64bb2aba2f3c442af9c8263 329 SUPERFAMILY SSF46785 2 83 4.69E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_10460 7d53e961b64bb2aba2f3c442af9c8263 329 SUPERFAMILY SSF53850 90 305 3.38E-36 T 11-10-2018 AYJ52_10460 7d53e961b64bb2aba2f3c442af9c8263 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.9E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_10460 7d53e961b64bb2aba2f3c442af9c8263 329 Gene3D G3DSA:1.10.10.10 1 86 3.8E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10460 7d53e961b64bb2aba2f3c442af9c8263 329 Pfam PF03466 LysR substrate binding domain 97 304 7.0E-17 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_10460 7d53e961b64bb2aba2f3c442af9c8263 329 Gene3D G3DSA:3.40.190.10 92 303 1.3E-60 T 11-10-2018 AYJ52_10460 7d53e961b64bb2aba2f3c442af9c8263 329 Gene3D G3DSA:3.40.190.10 170 279 1.3E-60 T 11-10-2018 AYJ52_10460 7d53e961b64bb2aba2f3c442af9c8263 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_10460 7d53e961b64bb2aba2f3c442af9c8263 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_10460 7d53e961b64bb2aba2f3c442af9c8263 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 SUPERFAMILY SSF111369 63 154 8.24E-10 T 11-10-2018 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 Gene3D G3DSA:1.10.287.470 99 124 8.2E-13 T 11-10-2018 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 26 378 9.3E-120 T 11-10-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 Pfam PF13437 HlyD family secretion protein 250 367 3.9E-16 T 11-10-2018 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 Gene3D G3DSA:1.10.287.470 140 206 1.9E-11 T 11-10-2018 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 SUPERFAMILY SSF111369 197 303 9.15E-13 T 11-10-2018 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 Gene3D G3DSA:2.40.50.100 65 98 8.2E-13 T 11-10-2018 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 Gene3D G3DSA:2.40.30.170 262 382 5.6E-33 T 11-10-2018 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 77 97 1.7E-6 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 368 383 1.7E-6 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 262 283 1.7E-6 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 Pfam PF13533 Biotin-lipoyl like 65 114 1.9E-13 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AYJ52_09910 6be1ebaf380ee38bcb4e048cbfe5db02 383 SUPERFAMILY SSF111369 144 201 1.09E-6 T 11-10-2018 AYJ52_12055 19f5a5da6989f0db8aa8ecd73b4fa13e 255 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 217 236 2.5E-7 T 11-10-2018 AYJ52_12055 19f5a5da6989f0db8aa8ecd73b4fa13e 255 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 216 2.5E-7 T 11-10-2018 AYJ52_12055 19f5a5da6989f0db8aa8ecd73b4fa13e 255 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 237 255 2.5E-7 T 11-10-2018 AYJ52_12055 19f5a5da6989f0db8aa8ecd73b4fa13e 255 Gene3D G3DSA:3.30.1330.60 127 255 3.6E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_12055 19f5a5da6989f0db8aa8ecd73b4fa13e 255 Pfam PF00691 OmpA family 154 248 3.7E-24 T 11-10-2018 IPR006665 OmpA-like domain AYJ52_12055 19f5a5da6989f0db8aa8ecd73b4fa13e 255 PRINTS PR01021 OMPA domain signature 184 199 1.0E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_12055 19f5a5da6989f0db8aa8ecd73b4fa13e 255 PRINTS PR01021 OMPA domain signature 154 176 1.0E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_12055 19f5a5da6989f0db8aa8ecd73b4fa13e 255 PRINTS PR01021 OMPA domain signature 199 215 1.0E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_12055 19f5a5da6989f0db8aa8ecd73b4fa13e 255 SUPERFAMILY SSF103088 146 254 5.76E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_18770 e6a4293f5851344ab65c544bdc6d504d 399 Pfam PF07690 Major Facilitator Superfamily 16 358 4.5E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_18770 e6a4293f5851344ab65c544bdc6d504d 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 380 2.4E-69 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AYJ52_18770 e6a4293f5851344ab65c544bdc6d504d 399 SUPERFAMILY SSF103473 11 390 1.44E-59 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_18770 e6a4293f5851344ab65c544bdc6d504d 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_18770 e6a4293f5851344ab65c544bdc6d504d 399 Gene3D G3DSA:1.20.1720.10 10 391 2.9E-92 T 11-10-2018 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 Pfam PF02954 Bacterial regulatory protein, Fis family 514 554 2.2E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 Pfam PF00158 Sigma-54 interaction domain 245 410 6.6E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 520 537 3.7E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 537 556 3.7E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 SMART SM00382 264 408 4.9E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 Gene3D G3DSA:3.30.1380.20 46 199 3.8E-6 T 11-10-2018 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 268 281 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 Pfam PF06505 Activator of aromatic catabolism 21 119 3.6E-32 T 11-10-2018 IPR010523 Activator of aromatic catabolism AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 Gene3D G3DSA:1.10.8.60 415 482 1.6E-26 T 11-10-2018 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 457 466 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 SUPERFAMILY SSF46689 457 556 2.37E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 SUPERFAMILY SSF52540 245 479 1.5E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 Gene3D G3DSA:1.10.10.60 492 556 2.5E-14 T 11-10-2018 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 Pfam PF02830 V4R domain 135 194 8.6E-16 T 11-10-2018 IPR004096 4-vinyl reductase, 4VR AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 SUPERFAMILY SSF111126 57 189 1.62E-11 T 11-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 SMART SM00989 132 194 2.8E-21 T 11-10-2018 IPR004096 4-vinyl reductase, 4VR AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 330 345 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 39 150 2.0E-47 T 11-10-2018 IPR010523 Activator of aromatic catabolism AYJ52_11400 9e3b9e9cfbfe33d00ad35c57bc1d050a 556 Gene3D G3DSA:3.40.50.300 231 414 2.1E-62 T 11-10-2018 AYJ52_10375 e4bd78d20b4ed421b704ea22b72362e6 225 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 8 223 5.0E-94 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_10375 e4bd78d20b4ed421b704ea22b72362e6 225 Gene3D G3DSA:1.10.3810.10 47 224 7.0E-58 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_10375 e4bd78d20b4ed421b704ea22b72362e6 225 SUPERFAMILY SSF53955 51 221 1.07E-59 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_10375 e4bd78d20b4ed421b704ea22b72362e6 225 Pfam PF00912 Transglycosylase 55 218 7.4E-55 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_10375 e4bd78d20b4ed421b704ea22b72362e6 225 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 224 36.595 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 Gene3D G3DSA:3.10.20.30 431 502 1.2E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 Gene3D G3DSA:3.30.460.10 232 363 1.7E-49 T 11-10-2018 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 SUPERFAMILY SSF109604 31 229 6.59E-45 T 11-10-2018 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 SUPERFAMILY SSF81301 231 395 1.59E-58 T 11-10-2018 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 Gene3D G3DSA:1.10.3210.10 24 230 3.6E-41 T 11-10-2018 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 SMART SM00954 274 383 1.5E-59 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 SUPERFAMILY SSF81271 433 493 2.18E-18 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 Pfam PF04607 Region found in RelA / SpoT proteins 274 383 1.7E-33 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 Gene3D G3DSA:3.30.70.260 690 766 2.7E-17 T 11-10-2018 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 Pfam PF13328 HD domain 68 214 1.7E-37 T 11-10-2018 IPR003607 HD/PDEase domain AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 SUPERFAMILY SSF55021 689 766 3.71E-13 T 11-10-2018 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 78 762 4.0E-171 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 Pfam PF02824 TGS domain 434 493 1.1E-18 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AYJ52_08440 77ee890caaba75e8f006327616767ec4 768 Pfam PF13291 ACT domain 689 763 2.5E-18 T 11-10-2018 IPR002912 ACT domain AYJ52_03215 e5d699d2fa9bafbf9d8ec7ab3b121c99 295 Pfam PF10118 Predicted metal-dependent hydrolase 23 265 4.3E-77 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_03215 e5d699d2fa9bafbf9d8ec7ab3b121c99 295 PIRSF PIRSF007580 6 284 1.6E-70 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_16615 a2dce70f113407fda344e2bc3f700d9a 324 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 34 314 7.4E-79 T 11-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AYJ52_16615 a2dce70f113407fda344e2bc3f700d9a 324 Gene3D G3DSA:1.10.8.450 241 273 4.1E-74 T 11-10-2018 AYJ52_16615 a2dce70f113407fda344e2bc3f700d9a 324 Gene3D G3DSA:3.40.190.10 111 210 4.1E-74 T 11-10-2018 AYJ52_16615 a2dce70f113407fda344e2bc3f700d9a 324 SMART SM00062 33 246 1.1E-5 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_16615 a2dce70f113407fda344e2bc3f700d9a 324 Gene3D G3DSA:3.40.190.10 37 305 4.1E-74 T 11-10-2018 AYJ52_16615 a2dce70f113407fda344e2bc3f700d9a 324 SUPERFAMILY SSF53850 46 259 4.81E-50 T 11-10-2018 AYJ52_16615 a2dce70f113407fda344e2bc3f700d9a 324 Pfam PF09084 NMT1/THI5 like 66 249 1.7E-27 T 11-10-2018 IPR015168 SsuA/THI5-like AYJ52_14690 f45477237fb7126b75a84fc8a18f98fa 212 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 211 1.5E-80 T 11-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 AYJ52_14690 f45477237fb7126b75a84fc8a18f98fa 212 SUPERFAMILY SSF47616 81 210 8.07E-28 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_14690 f45477237fb7126b75a84fc8a18f98fa 212 Gene3D G3DSA:3.40.30.10 1 86 2.8E-25 T 11-10-2018 AYJ52_14690 f45477237fb7126b75a84fc8a18f98fa 212 Gene3D G3DSA:1.20.1050.10 87 212 2.7E-49 T 11-10-2018 AYJ52_14690 f45477237fb7126b75a84fc8a18f98fa 212 SUPERFAMILY SSF52833 1 83 1.04E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_14690 f45477237fb7126b75a84fc8a18f98fa 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 2.0E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_14660 ee3d0cf36bfc1cd0f54575dbd337e3ad 206 Gene3D G3DSA:1.10.10.60 9 59 3.4E-15 T 11-10-2018 AYJ52_14660 ee3d0cf36bfc1cd0f54575dbd337e3ad 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 1.4E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_14660 ee3d0cf36bfc1cd0f54575dbd337e3ad 206 SUPERFAMILY SSF46689 6 83 1.23E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14660 ee3d0cf36bfc1cd0f54575dbd337e3ad 206 SUPERFAMILY SSF48498 81 165 1.08E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_14660 ee3d0cf36bfc1cd0f54575dbd337e3ad 206 Gene3D G3DSA:1.10.357.10 60 200 5.7E-31 T 11-10-2018 AYJ52_14660 ee3d0cf36bfc1cd0f54575dbd337e3ad 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 5.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_14660 ee3d0cf36bfc1cd0f54575dbd337e3ad 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 5.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_07880 9324c8609684cf13d8784c6cbf6a51d7 188 Pfam PF00929 Exonuclease 10 170 5.4E-32 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_07880 9324c8609684cf13d8784c6cbf6a51d7 188 Hamap MF_00045 Oligoribonuclease [orn]. 4 182 43.403 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 AYJ52_07880 9324c8609684cf13d8784c6cbf6a51d7 188 SMART SM00479 8 181 2.4E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_07880 9324c8609684cf13d8784c6cbf6a51d7 188 SUPERFAMILY SSF53098 7 181 8.1E-46 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_07880 9324c8609684cf13d8784c6cbf6a51d7 188 Gene3D G3DSA:3.30.420.10 1 188 4.5E-75 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_12815 d6934607de99f36c2422f5c35a34382c 244 Gene3D G3DSA:3.40.50.12500 1 243 1.2E-84 T 11-10-2018 AYJ52_12815 d6934607de99f36c2422f5c35a34382c 244 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 210 3.5E-13 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_16755 9fe62933ddfa0ee80935c2f69c32dda3 244 SUPERFAMILY SSF56235 2 238 3.66E-33 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_16755 9fe62933ddfa0ee80935c2f69c32dda3 244 Gene3D G3DSA:3.60.20.10 2 235 6.0E-24 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_16755 9fe62933ddfa0ee80935c2f69c32dda3 244 PIRSF PIRSF009120 1 243 3.9E-106 T 11-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 AYJ52_16755 9fe62933ddfa0ee80935c2f69c32dda3 244 Pfam PF00227 Proteasome subunit 4 173 4.8E-7 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AYJ52_10520 92a198a1fa32759d7c2d87a9a531df01 183 SUPERFAMILY SSF53335 4 179 2.35E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_10520 92a198a1fa32759d7c2d87a9a531df01 183 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AYJ52_10520 92a198a1fa32759d7c2d87a9a531df01 183 Gene3D G3DSA:3.40.50.150 1 183 2.4E-54 T 11-10-2018 AYJ52_10520 92a198a1fa32759d7c2d87a9a531df01 183 PIRSF PIRSF004553 4 182 9.0E-46 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AYJ52_10520 92a198a1fa32759d7c2d87a9a531df01 183 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 180 2.7E-49 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AYJ52_10520 92a198a1fa32759d7c2d87a9a531df01 183 Pfam PF03602 Conserved hypothetical protein 95 5 179 1.0E-53 T 11-10-2018 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 5.0E-54 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 Pfam PF13241 Putative NAD(P)-binding 7 116 4.9E-25 T 11-10-2018 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 Gene3D G3DSA:3.30.950.10 332 457 4.3E-47 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 Pfam PF10414 Sirohaem synthase dimerisation region 152 208 5.3E-18 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 Gene3D G3DSA:3.40.50.720 1 113 4.3E-26 T 11-10-2018 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 Gene3D G3DSA:1.10.8.210 150 210 3.6E-9 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 SUPERFAMILY SSF51735 2 113 3.12E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 49.943 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 PIRSF PIRSF036426 1 457 2.9E-199 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 SUPERFAMILY SSF75615 115 211 6.28E-25 T 11-10-2018 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 Gene3D G3DSA:3.40.1010.10 215 331 1.7E-46 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 Gene3D G3DSA:3.30.160.110 114 149 4.1E-14 T 11-10-2018 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 4.5E-96 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 SUPERFAMILY SSF53790 212 456 2.75E-82 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AYJ52_00870 cf18bacf09cd9d528cf5d37e12752f6a 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 208 1.1E-61 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AYJ52_09690 b1932bd151230426faafeead36341e81 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AYJ52_09690 b1932bd151230426faafeead36341e81 409 SUPERFAMILY SSF53901 213 407 1.6E-62 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_09690 b1932bd151230426faafeead36341e81 409 SUPERFAMILY SSF53901 2 251 1.03E-59 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_09690 b1932bd151230426faafeead36341e81 409 SMART SM00825 Beta-ketoacyl synthase 4 409 2.3E-14 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AYJ52_09690 b1932bd151230426faafeead36341e81 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.5E-41 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AYJ52_09690 b1932bd151230426faafeead36341e81 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 364 1.5E-31 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AYJ52_09690 b1932bd151230426faafeead36341e81 409 Gene3D G3DSA:3.40.47.10 258 408 2.0E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_09690 b1932bd151230426faafeead36341e81 409 Gene3D G3DSA:3.40.47.10 1 252 4.7E-61 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_04700 73a965a3763083b6d0a06acf67b86407 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AYJ52_04700 73a965a3763083b6d0a06acf67b86407 342 Gene3D G3DSA:3.40.50.720 154 308 9.0E-112 T 11-10-2018 AYJ52_04700 73a965a3763083b6d0a06acf67b86407 342 Pfam PF00107 Zinc-binding dehydrogenase 180 302 1.3E-22 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AYJ52_04700 73a965a3763083b6d0a06acf67b86407 342 SMART SM00829 15 336 4.9E-8 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AYJ52_04700 73a965a3763083b6d0a06acf67b86407 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 137 1.3E-24 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AYJ52_04700 73a965a3763083b6d0a06acf67b86407 342 SUPERFAMILY SSF50129 8 164 2.89E-42 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_04700 73a965a3763083b6d0a06acf67b86407 342 SUPERFAMILY SSF51735 143 306 5.92E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_04700 73a965a3763083b6d0a06acf67b86407 342 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 173 200 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AYJ52_04700 73a965a3763083b6d0a06acf67b86407 342 Gene3D G3DSA:3.90.180.10 20 336 9.0E-112 T 11-10-2018 AYJ52_14070 8f13a1e8436858727d0d060b43e0b496 284 SUPERFAMILY SSF46689 237 284 5.82E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14070 8f13a1e8436858727d0d060b43e0b496 284 Gene3D G3DSA:1.10.10.60 184 234 1.9E-14 T 11-10-2018 AYJ52_14070 8f13a1e8436858727d0d060b43e0b496 284 SUPERFAMILY SSF46689 185 235 2.69E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14070 8f13a1e8436858727d0d060b43e0b496 284 Gene3D G3DSA:1.10.10.60 235 284 1.5E-17 T 11-10-2018 AYJ52_14070 8f13a1e8436858727d0d060b43e0b496 284 SMART SM00342 201 284 1.2E-33 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_14070 8f13a1e8436858727d0d060b43e0b496 284 Pfam PF12833 Helix-turn-helix domain 207 284 2.8E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_14070 8f13a1e8436858727d0d060b43e0b496 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AYJ52_08410 e5549b145ee050122e0b523ee4bd79d8 289 Gene3D G3DSA:3.40.50.720 2 164 1.7E-42 T 11-10-2018 AYJ52_08410 e5549b145ee050122e0b523ee4bd79d8 289 Gene3D G3DSA:1.10.1040.10 165 289 1.8E-30 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AYJ52_08410 e5549b145ee050122e0b523ee4bd79d8 289 SUPERFAMILY SSF48179 163 288 1.47E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_08410 e5549b145ee050122e0b523ee4bd79d8 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 285 1.6E-22 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AYJ52_08410 e5549b145ee050122e0b523ee4bd79d8 289 SUPERFAMILY SSF51735 8 163 1.71E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_08410 e5549b145ee050122e0b523ee4bd79d8 289 PIRSF PIRSF000103 2 289 1.6E-58 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AYJ52_08410 e5549b145ee050122e0b523ee4bd79d8 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 162 2.6E-41 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 PIRSF PIRSF000124 3 390 4.4E-127 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 173 7.8E-35 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 Gene3D G3DSA:1.20.5.100 196 222 4.4E-20 T 11-10-2018 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 SUPERFAMILY SSF52413 285 389 1.03E-22 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 Gene3D G3DSA:3.40.50.720 224 390 2.1E-60 T 11-10-2018 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 Gene3D G3DSA:3.40.50.720 3 195 1.6E-60 T 11-10-2018 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 PIRSF PIRSF500134 3 372 4.7E-116 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 SUPERFAMILY SSF48179 193 289 2.72E-30 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 SMART SM00984 302 389 2.2E-8 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 194 283 4.1E-27 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 374 2.0E-99 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AYJ52_05335 d6fe802183927dfb5f7a1e5880f3501a 390 SUPERFAMILY SSF51735 5 196 3.31E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_02610 cfd83df779730bc3e023b6f49cd2b61e 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 116 4.8E-41 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02610 cfd83df779730bc3e023b6f49cd2b61e 116 Gene3D G3DSA:3.30.420.100 2 116 1.4E-40 T 11-10-2018 AYJ52_02610 cfd83df779730bc3e023b6f49cd2b61e 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 1.2E-39 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02610 cfd83df779730bc3e023b6f49cd2b61e 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 25.824 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02610 cfd83df779730bc3e023b6f49cd2b61e 116 SUPERFAMILY SSF53137 4 114 4.36E-50 T 11-10-2018 AYJ52_08460 33011417ba43086bfcb761bd5356dbb4 487 Gene3D G3DSA:1.10.3090.10 157 399 6.4E-68 T 11-10-2018 AYJ52_08460 33011417ba43086bfcb761bd5356dbb4 487 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 6 408 2.5E-119 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AYJ52_08460 33011417ba43086bfcb761bd5356dbb4 487 Pfam PF01743 Poly A polymerase head domain 34 159 3.3E-29 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AYJ52_08460 33011417ba43086bfcb761bd5356dbb4 487 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 441 33.847 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AYJ52_08460 33011417ba43086bfcb761bd5356dbb4 487 Gene3D G3DSA:3.30.460.10 2 155 1.2E-45 T 11-10-2018 AYJ52_08460 33011417ba43086bfcb761bd5356dbb4 487 SUPERFAMILY SSF81891 157 384 1.44E-38 T 11-10-2018 AYJ52_08460 33011417ba43086bfcb761bd5356dbb4 487 SUPERFAMILY SSF81301 10 156 3.16E-33 T 11-10-2018 AYJ52_08460 33011417ba43086bfcb761bd5356dbb4 487 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 186 247 9.1E-12 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AYJ52_08460 33011417ba43086bfcb761bd5356dbb4 487 Pfam PF12626 Polymerase A arginine-rich C-terminus 296 408 4.2E-29 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 SUPERFAMILY SSF50465 300 394 1.61E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.6E-18 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 SUPERFAMILY SSF50447 207 303 1.96E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.8E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 Gene3D G3DSA:3.40.50.300 1 205 3.6E-69 T 11-10-2018 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 Gene3D G3DSA:2.40.30.10 208 336 1.4E-53 T 11-10-2018 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 Gene3D G3DSA:2.40.30.10 340 394 3.4E-28 T 11-10-2018 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 6.4E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.5E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.617 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 SUPERFAMILY SSF52540 6 221 2.47E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09715 d93e03f3593d43e7f0b6fc55664b1016 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 3.1E-227 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 SUPERFAMILY SSF50465 300 394 1.61E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 3.6E-18 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 SUPERFAMILY SSF50447 207 303 1.96E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 5.8E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 Gene3D G3DSA:3.40.50.300 1 205 3.6E-69 T 11-10-2018 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 Gene3D G3DSA:2.40.30.10 208 336 1.4E-53 T 11-10-2018 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 Gene3D G3DSA:2.40.30.10 340 394 3.4E-28 T 11-10-2018 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.4E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 6.4E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.5E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.617 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 SUPERFAMILY SSF52540 6 221 2.47E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_06610 d93e03f3593d43e7f0b6fc55664b1016 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 3.1E-227 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 PIRSF PIRSF000126 1 260 5.5E-70 T 11-10-2018 AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 Gene3D G3DSA:3.40.50.720 4 260 2.4E-64 T 11-10-2018 AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 Pfam PF00106 short chain dehydrogenase 6 193 2.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.1E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 SUPERFAMILY SSF51735 6 222 8.87E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00255 6ebecc177c09388ec1abb6be5ce64c75 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14710 d254a08e1de5b6f37f4e0f1dc526c1c2 463 PIRSF PIRSF006060 1 461 1.3E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_14710 d254a08e1de5b6f37f4e0f1dc526c1c2 463 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_14710 d254a08e1de5b6f37f4e0f1dc526c1c2 463 Pfam PF00324 Amino acid permease 17 444 2.2E-105 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_14710 d254a08e1de5b6f37f4e0f1dc526c1c2 463 Gene3D G3DSA:1.20.1740.10 11 462 1.3E-60 T 11-10-2018 AYJ52_18205 38ae03387e1f8000f3f8f6a5f87b0034 162 Gene3D G3DSA:3.90.79.10 1 151 7.7E-38 T 11-10-2018 AYJ52_18205 38ae03387e1f8000f3f8f6a5f87b0034 162 Pfam PF00293 NUDIX domain 7 127 2.8E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_18205 38ae03387e1f8000f3f8f6a5f87b0034 162 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AYJ52_18205 38ae03387e1f8000f3f8f6a5f87b0034 162 SUPERFAMILY SSF55811 3 152 2.3E-30 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_02085 39e5ee229ac18b18f3d17282712f004c 104 SUPERFAMILY SSF52821 14 103 1.83E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_02085 39e5ee229ac18b18f3d17282712f004c 104 Pfam PF00581 Rhodanese-like domain 16 91 1.4E-9 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_02085 39e5ee229ac18b18f3d17282712f004c 104 Gene3D G3DSA:3.40.250.10 11 104 2.5E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_02085 39e5ee229ac18b18f3d17282712f004c 104 SMART SM00450 2 99 3.6E-12 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_02670 63fb7b18fb813bfae2b4fba41d688e3a 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.717 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02670 63fb7b18fb813bfae2b4fba41d688e3a 91 SUPERFAMILY SSF54570 3 84 5.23E-34 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02670 63fb7b18fb813bfae2b4fba41d688e3a 91 Gene3D G3DSA:3.30.860.10 1 91 3.6E-39 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02670 63fb7b18fb813bfae2b4fba41d688e3a 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.7E-43 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AYJ52_02670 63fb7b18fb813bfae2b4fba41d688e3a 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02670 63fb7b18fb813bfae2b4fba41d688e3a 91 PIRSF PIRSF002144 1 91 4.3E-31 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02670 63fb7b18fb813bfae2b4fba41d688e3a 91 Pfam PF00203 Ribosomal protein S19 3 83 3.9E-35 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02670 63fb7b18fb813bfae2b4fba41d688e3a 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.2E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02670 63fb7b18fb813bfae2b4fba41d688e3a 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.2E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02670 63fb7b18fb813bfae2b4fba41d688e3a 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.2E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_10215 8f5908aec752ed3c6752da01b68b7005 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_10215 8f5908aec752ed3c6752da01b68b7005 488 Gene3D G3DSA:3.40.605.10 15 470 4.4E-168 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_10215 8f5908aec752ed3c6752da01b68b7005 488 Pfam PF00171 Aldehyde dehydrogenase family 15 475 2.6E-169 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_10215 8f5908aec752ed3c6752da01b68b7005 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_10215 8f5908aec752ed3c6752da01b68b7005 488 SUPERFAMILY SSF53720 4 479 6.68E-159 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_10215 8f5908aec752ed3c6752da01b68b7005 488 Gene3D G3DSA:3.40.309.10 252 445 4.4E-168 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_08600 5528d5040e2a84c081cff276f34d570a 276 Gene3D G3DSA:1.10.3730.10 165 272 5.8E-41 T 11-10-2018 AYJ52_08600 5528d5040e2a84c081cff276f34d570a 276 PIRSF PIRSF000193 6 270 2.0E-76 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AYJ52_08600 5528d5040e2a84c081cff276f34d570a 276 SUPERFAMILY SSF51735 8 160 1.97E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_08600 5528d5040e2a84c081cff276f34d570a 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 4.2E-35 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AYJ52_08600 5528d5040e2a84c081cff276f34d570a 276 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 9 267 5.2E-78 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AYJ52_08600 5528d5040e2a84c081cff276f34d570a 276 SUPERFAMILY SSF48179 163 270 5.61E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_08600 5528d5040e2a84c081cff276f34d570a 276 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 7 267 26.274 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AYJ52_08600 5528d5040e2a84c081cff276f34d570a 276 Gene3D G3DSA:3.40.50.720 5 164 1.8E-48 T 11-10-2018 AYJ52_08600 5528d5040e2a84c081cff276f34d570a 276 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AYJ52_08600 5528d5040e2a84c081cff276f34d570a 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 9 100 7.2E-23 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 SUPERFAMILY SSF51905 202 514 7.78E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 3.3E-235 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 SUPERFAMILY SSF52833 103 195 9.86E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 Pfam PF13192 Thioredoxin domain 119 194 1.4E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 Gene3D G3DSA:3.50.50.60 212 509 2.3E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 8.5E-39 T 11-10-2018 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 8.5E-39 T 11-10-2018 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 8.5E-39 T 11-10-2018 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 8.5E-39 T 11-10-2018 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 8.5E-39 T 11-10-2018 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 Gene3D G3DSA:3.40.30.80 1 199 2.4E-64 T 11-10-2018 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PIRSF PIRSF000238 1 521 2.8E-257 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 Gene3D G3DSA:3.50.50.60 327 450 2.3E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 504 6.0E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_12885 be472ed4035d1ecfee29e9cc1814fc01 521 SUPERFAMILY SSF52833 1 100 8.28E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_04520 f569c952318ddebb41c8eefa3e79181a 212 Gene3D G3DSA:3.40.50.1000 11 203 6.3E-36 T 11-10-2018 IPR023214 HAD superfamily AYJ52_04520 f569c952318ddebb41c8eefa3e79181a 212 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 183 5.5E-37 T 11-10-2018 AYJ52_04520 f569c952318ddebb41c8eefa3e79181a 212 Gene3D G3DSA:1.10.150.240 22 86 6.3E-36 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ52_04520 f569c952318ddebb41c8eefa3e79181a 212 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 59 177 4.3E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_04520 f569c952318ddebb41c8eefa3e79181a 212 SUPERFAMILY SSF56784 6 208 8.66E-41 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.5E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.5E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.5E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 SUPERFAMILY SSF51735 8 252 3.54E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 Gene3D G3DSA:3.40.50.720 2 253 8.7E-70 T 11-10-2018 AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 3.1E-58 T 11-10-2018 AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10175 306ce029d35d872cb79c3b6822f0832f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 7.8E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_08770 cad20630d4a0b992dcd5974d2aa2c79f 205 Gene3D G3DSA:3.90.79.10 2 181 3.9E-45 T 11-10-2018 AYJ52_08770 cad20630d4a0b992dcd5974d2aa2c79f 205 SUPERFAMILY SSF55811 24 177 3.93E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_08770 cad20630d4a0b992dcd5974d2aa2c79f 205 Pfam PF00293 NUDIX domain 24 138 7.7E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_11995 34da9c522a1941beb807733a2f556e67 293 Pfam PF00005 ABC transporter 41 180 4.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_11995 34da9c522a1941beb807733a2f556e67 293 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_11995 34da9c522a1941beb807733a2f556e67 293 SUPERFAMILY SSF52540 22 253 5.32E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_11995 34da9c522a1941beb807733a2f556e67 293 SMART SM00382 50 229 1.7E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_11995 34da9c522a1941beb807733a2f556e67 293 Gene3D G3DSA:3.40.50.300 19 279 5.1E-66 T 11-10-2018 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 42.962 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.1E-34 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 6.7E-85 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 SUPERFAMILY SSF56059 104 321 1.29E-65 T 11-10-2018 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 SUPERFAMILY SSF51246 328 423 1.65E-29 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 Gene3D G3DSA:3.40.50.20 2 95 1.4E-35 T 11-10-2018 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 6.3E-176 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 SUPERFAMILY SSF52440 1 103 3.17E-36 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 SMART SM01209 103 296 1.9E-139 T 11-10-2018 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 Gene3D G3DSA:3.90.600.10 329 428 7.5E-33 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 SMART SM01210 329 422 6.0E-47 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 Gene3D G3DSA:3.30.1490.20 122 190 2.9E-28 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 420 5.8E-27 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AYJ52_16810 a0a18619ad89c11a004f2e6327d314c5 428 Gene3D G3DSA:3.30.470.20 191 328 8.4E-58 T 11-10-2018 AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 Pfam PF00005 ABC transporter 33 192 8.3E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 545 571 0.0018 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 273 0.31 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 SUPERFAMILY SSF52540 316 565 5.1E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 Pfam PF00005 ABC transporter 342 492 5.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 Gene3D G3DSA:3.40.50.300 9 303 2.8E-81 T 11-10-2018 AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 Gene3D G3DSA:3.40.50.300 314 576 1.3E-82 T 11-10-2018 AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 SMART SM00382 41 242 6.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 SMART SM00382 350 543 4.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_13625 32b06943e6fc2d850fd48043debacbf4 577 SUPERFAMILY SSF52540 11 264 7.02E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02220 3548f6668fd748d4540746126996a958 280 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 6 273 1.0E-82 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AYJ52_02220 3548f6668fd748d4540746126996a958 280 Pfam PF00149 Calcineurin-like phosphoesterase 8 161 4.2E-14 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AYJ52_02220 3548f6668fd748d4540746126996a958 280 Gene3D G3DSA:3.60.21.10 6 279 2.4E-67 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AYJ52_02220 3548f6668fd748d4540746126996a958 280 PIRSF PIRSF000903 4 279 8.3E-94 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AYJ52_02220 3548f6668fd748d4540746126996a958 280 SUPERFAMILY SSF56300 7 266 3.96E-50 T 11-10-2018 AYJ52_11015 bb8bb16467962cf7644eac01ab019274 226 SUPERFAMILY SSF46785 4 69 5.68E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_11015 bb8bb16467962cf7644eac01ab019274 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 65 5.8E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_11015 bb8bb16467962cf7644eac01ab019274 226 SMART SM00345 7 65 4.6E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_11015 bb8bb16467962cf7644eac01ab019274 226 SUPERFAMILY SSF48008 73 211 9.15E-15 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_11015 bb8bb16467962cf7644eac01ab019274 226 Gene3D G3DSA:1.20.120.530 73 215 1.8E-18 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_11015 bb8bb16467962cf7644eac01ab019274 226 Gene3D G3DSA:1.10.10.10 1 67 4.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_11015 bb8bb16467962cf7644eac01ab019274 226 Pfam PF07729 FCD domain 75 210 6.4E-12 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_11015 bb8bb16467962cf7644eac01ab019274 226 SMART SM00895 75 213 2.0E-18 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 222 486 1.9E-57 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 Pfam PF01256 Carbohydrate kinase 238 481 4.9E-48 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 SUPERFAMILY SSF53613 220 485 1.17E-59 T 11-10-2018 IPR029056 Ribokinase-like AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 23 201 5.6E-35 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 SUPERFAMILY SSF64153 5 237 4.84E-53 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 PIRSF PIRSF017184 3 486 1.6E-104 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 Gene3D G3DSA:3.40.1190.20 219 486 3.3E-70 T 11-10-2018 IPR029056 Ribokinase-like AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 Pfam PF03853 YjeF-related protein N-terminus 27 185 5.4E-36 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 Gene3D G3DSA:3.40.50.10260 2 210 1.8E-51 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 215 485 19.299 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 7 206 18.42 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AYJ52_13215 6e12cec67f6ef7c1ce1920a1dd8f8d63 486 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 426 436 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AYJ52_05310 681b56fab8d1239066a0b1fa3e71115c 303 SUPERFAMILY SSF53448 2 229 6.57E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_05310 681b56fab8d1239066a0b1fa3e71115c 303 Gene3D G3DSA:3.90.550.10 1 237 1.7E-55 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_05310 681b56fab8d1239066a0b1fa3e71115c 303 Pfam PF00535 Glycosyl transferase family 2 4 145 5.4E-35 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 Gene3D G3DSA:1.25.40.10 24 229 4.3E-68 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 SMART SM00671 184 219 2.7E-13 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 SMART SM00671 76 111 2.3E-10 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 SMART SM00671 39 75 9.9E-6 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 SMART SM00671 148 183 1.8E-8 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 SMART SM00671 112 147 2.2E-12 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 SUPERFAMILY SSF81901 30 225 1.13E-53 T 11-10-2018 AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 Pfam PF08238 Sel1 repeat 39 70 3.7E-6 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 Pfam PF08238 Sel1 repeat 112 147 4.8E-11 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 Pfam PF08238 Sel1 repeat 149 182 1.7E-7 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 Pfam PF08238 Sel1 repeat 78 111 4.6E-9 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_05445 a7af120d14fcabf6aaa5f0d589c48381 230 Pfam PF08238 Sel1 repeat 184 219 1.6E-12 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_04485 9ffe1b4e0e1fd818fa508c3f3b2e6f7c 456 SUPERFAMILY SSF69572 172 308 5.1E-30 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AYJ52_04485 9ffe1b4e0e1fd818fa508c3f3b2e6f7c 456 Pfam PF00899 ThiF family 172 304 3.1E-25 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AYJ52_04485 9ffe1b4e0e1fd818fa508c3f3b2e6f7c 456 Gene3D G3DSA:3.40.50.720 180 429 3.7E-32 T 11-10-2018 AYJ52_16475 a20ce980da02db9acb67b04bb8faeb90 306 SUPERFAMILY SSF46785 1 112 1.65E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_16475 a20ce980da02db9acb67b04bb8faeb90 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.0E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_16475 a20ce980da02db9acb67b04bb8faeb90 306 SUPERFAMILY SSF53850 89 293 2.04E-34 T 11-10-2018 AYJ52_16475 a20ce980da02db9acb67b04bb8faeb90 306 Gene3D G3DSA:3.40.190.10 90 292 3.6E-67 T 11-10-2018 AYJ52_16475 a20ce980da02db9acb67b04bb8faeb90 306 Gene3D G3DSA:3.40.190.10 163 271 3.6E-67 T 11-10-2018 AYJ52_16475 a20ce980da02db9acb67b04bb8faeb90 306 Pfam PF03466 LysR substrate binding domain 90 293 1.5E-34 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_16475 a20ce980da02db9acb67b04bb8faeb90 306 Gene3D G3DSA:1.10.10.10 1 89 3.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_11730 809c9d732dc8f5cf563475d3d54cd61a 176 Pfam PF13673 Acetyltransferase (GNAT) domain 57 157 3.1E-13 T 11-10-2018 IPR000182 GNAT domain AYJ52_11730 809c9d732dc8f5cf563475d3d54cd61a 176 SUPERFAMILY SSF55729 51 156 1.05E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_11730 809c9d732dc8f5cf563475d3d54cd61a 176 Gene3D G3DSA:3.40.630.30 17 160 7.0E-18 T 11-10-2018 AYJ52_14010 6b40d8d56a2ed543b85b5ca735fd3e84 339 SUPERFAMILY SSF52922 202 337 2.75E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_14010 6b40d8d56a2ed543b85b5ca735fd3e84 339 Gene3D G3DSA:3.40.50.920 206 339 2.7E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_14010 6b40d8d56a2ed543b85b5ca735fd3e84 339 Gene3D G3DSA:3.40.50.970 2 205 3.1E-82 T 11-10-2018 AYJ52_14010 6b40d8d56a2ed543b85b5ca735fd3e84 339 Pfam PF02780 Transketolase, C-terminal domain 207 329 5.7E-41 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AYJ52_14010 6b40d8d56a2ed543b85b5ca735fd3e84 339 Pfam PF02779 Transketolase, pyrimidine binding domain 5 192 1.9E-55 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ52_14010 6b40d8d56a2ed543b85b5ca735fd3e84 339 SUPERFAMILY SSF52518 4 205 7.5E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_14010 6b40d8d56a2ed543b85b5ca735fd3e84 339 SMART SM00861 4 193 3.6E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ52_16935 1eae0245b7db216dd6f3269f9981c320 231 Pfam PF00072 Response regulator receiver domain 6 116 6.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_16935 1eae0245b7db216dd6f3269f9981c320 231 SUPERFAMILY SSF46894 127 224 7.94E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_16935 1eae0245b7db216dd6f3269f9981c320 231 Gene3D G3DSA:1.10.10.10 123 229 2.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_16935 1eae0245b7db216dd6f3269f9981c320 231 SMART SM00862 150 224 1.2E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_16935 1eae0245b7db216dd6f3269f9981c320 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 1.0E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_16935 1eae0245b7db216dd6f3269f9981c320 231 Gene3D G3DSA:3.40.50.2300 1 122 6.3E-35 T 11-10-2018 AYJ52_16935 1eae0245b7db216dd6f3269f9981c320 231 SUPERFAMILY SSF52172 2 126 5.27E-36 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_16935 1eae0245b7db216dd6f3269f9981c320 231 SMART SM00448 4 116 1.6E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_16715 bfc25390163709897d2d1e8e0184c278 206 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 24 206 2.4E-80 T 11-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AYJ52_16715 bfc25390163709897d2d1e8e0184c278 206 SUPERFAMILY SSF81452 9 204 2.35E-55 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16715 bfc25390163709897d2d1e8e0184c278 206 Gene3D G3DSA:1.20.120.80 18 206 1.9E-52 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16715 bfc25390163709897d2d1e8e0184c278 206 Pfam PF00510 Cytochrome c oxidase subunit III 12 204 1.2E-14 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 Pfam PF00361 Proton-conducting membrane transporter 134 414 2.1E-84 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 4.4E-8 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 4.4E-8 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 422 444 4.4E-8 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 621 2.7E-202 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 1.5E-21 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 1.1E-51 T 11-10-2018 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 1.1E-51 T 11-10-2018 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 423 442 1.1E-51 T 11-10-2018 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 1.1E-51 T 11-10-2018 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 1.1E-51 T 11-10-2018 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 1.1E-51 T 11-10-2018 AYJ52_09185 a2bdbc03c2c64fd6f22c619f0f439c95 629 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 1.1E-51 T 11-10-2018 AYJ52_10890 4ae5150d53e5fe5183f1b586fbf178ac 579 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 224 543 2.4E-95 T 11-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal AYJ52_10890 4ae5150d53e5fe5183f1b586fbf178ac 579 Pfam PF17287 POTRA domain 164 214 7.7E-10 T 11-10-2018 IPR035251 ShlB, POTRA domain AYJ52_10890 4ae5150d53e5fe5183f1b586fbf178ac 579 Gene3D G3DSA:2.40.160.50 203 579 2.5E-89 T 11-10-2018 AYJ52_10890 4ae5150d53e5fe5183f1b586fbf178ac 579 PIRSF PIRSF029745 2 579 4.9E-148 T 11-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AYJ52_10890 4ae5150d53e5fe5183f1b586fbf178ac 579 Pfam PF08479 POTRA domain, ShlB-type 98 158 3.6E-12 T 11-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AYJ52_14740 4ae5150d53e5fe5183f1b586fbf178ac 579 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 224 543 2.4E-95 T 11-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal AYJ52_14740 4ae5150d53e5fe5183f1b586fbf178ac 579 Pfam PF17287 POTRA domain 164 214 7.7E-10 T 11-10-2018 IPR035251 ShlB, POTRA domain AYJ52_14740 4ae5150d53e5fe5183f1b586fbf178ac 579 Gene3D G3DSA:2.40.160.50 203 579 2.5E-89 T 11-10-2018 AYJ52_14740 4ae5150d53e5fe5183f1b586fbf178ac 579 PIRSF PIRSF029745 2 579 4.9E-148 T 11-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AYJ52_14740 4ae5150d53e5fe5183f1b586fbf178ac 579 Pfam PF08479 POTRA domain, ShlB-type 98 158 3.6E-12 T 11-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AYJ52_09765 92883ff1c61c4e66c57179b0ccb281d1 90 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 9 88 5.0E-20 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AYJ52_09765 92883ff1c61c4e66c57179b0ccb281d1 90 Gene3D G3DSA:3.30.1070.10 21 88 8.9E-21 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AYJ52_09765 92883ff1c61c4e66c57179b0ccb281d1 90 SUPERFAMILY SSF55229 37 89 3.27E-11 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AYJ52_09765 92883ff1c61c4e66c57179b0ccb281d1 90 Pfam PF03776 Septum formation topological specificity factor MinE 17 87 4.7E-19 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AYJ52_09765 92883ff1c61c4e66c57179b0ccb281d1 90 Hamap MF_00262 Cell division topological specificity factor [minE]. 4 90 15.573 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AYJ52_08575 faa7a0480751fb402887fda897508891 422 SMART SM00357 52 118 5.8E-19 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AYJ52_08575 faa7a0480751fb402887fda897508891 422 SMART SM00959 5 47 8.6E-17 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AYJ52_08575 faa7a0480751fb402887fda897508891 422 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 4.4E-211 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AYJ52_08575 faa7a0480751fb402887fda897508891 422 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.1E-32 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AYJ52_08575 faa7a0480751fb402887fda897508891 422 SUPERFAMILY SSF50249 48 125 1.33E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_08575 faa7a0480751fb402887fda897508891 422 SUPERFAMILY SSF52540 90 370 6.88E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_08575 faa7a0480751fb402887fda897508891 422 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.1E-15 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AYJ52_08575 faa7a0480751fb402887fda897508891 422 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 242.874 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AYJ52_08575 faa7a0480751fb402887fda897508891 422 SMART SM00382 170 355 3.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_08575 faa7a0480751fb402887fda897508891 422 Gene3D G3DSA:3.40.50.300 130 417 1.6E-128 T 11-10-2018 AYJ52_08575 faa7a0480751fb402887fda897508891 422 Gene3D G3DSA:1.10.720.10 1 46 4.1E-20 T 11-10-2018 AYJ52_08575 faa7a0480751fb402887fda897508891 422 SUPERFAMILY SSF68912 1 46 2.2E-11 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AYJ52_08575 faa7a0480751fb402887fda897508891 422 Gene3D G3DSA:2.40.50.140 47 123 4.6E-34 T 11-10-2018 AYJ52_08575 faa7a0480751fb402887fda897508891 422 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 6.8E-23 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_09480 46c6b674ae989f0d3640552aaf9543bf 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 9.2E-30 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AYJ52_09480 46c6b674ae989f0d3640552aaf9543bf 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 6.8E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AYJ52_09480 46c6b674ae989f0d3640552aaf9543bf 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AYJ52_09480 46c6b674ae989f0d3640552aaf9543bf 78 SUPERFAMILY SSF47336 2 77 1.31E-22 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_09480 46c6b674ae989f0d3640552aaf9543bf 78 Gene3D G3DSA:1.10.1200.10 1 77 1.2E-25 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_09480 46c6b674ae989f0d3640552aaf9543bf 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.511 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AYJ52_09480 46c6b674ae989f0d3640552aaf9543bf 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 3.0E-14 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AYJ52_18215 373a3dfc8fd82647b6456fbca78edbca 243 SUPERFAMILY SSF101322 13 236 5.75E-52 T 11-10-2018 IPR035932 HflD-like superfamily AYJ52_18215 373a3dfc8fd82647b6456fbca78edbca 243 Pfam PF04356 Protein of unknown function (DUF489) 17 230 1.5E-54 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD AYJ52_18215 373a3dfc8fd82647b6456fbca78edbca 243 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 20 229 2.0E-106 T 11-10-2018 AYJ52_18215 373a3dfc8fd82647b6456fbca78edbca 243 Gene3D G3DSA:1.10.3890.10 12 242 1.3E-58 T 11-10-2018 IPR035932 HflD-like superfamily AYJ52_18215 373a3dfc8fd82647b6456fbca78edbca 243 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 11 237 26.979 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD AYJ52_01880 f0a2fd665d3885396aa00f72f71dfc45 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 158 1.4E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_01880 f0a2fd665d3885396aa00f72f71dfc45 600 SUPERFAMILY SSF56645 41 280 2.09E-59 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_01880 f0a2fd665d3885396aa00f72f71dfc45 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 273 8.4E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_01880 f0a2fd665d3885396aa00f72f71dfc45 600 Gene3D G3DSA:2.40.110.10 162 288 6.5E-29 T 11-10-2018 AYJ52_01880 f0a2fd665d3885396aa00f72f71dfc45 600 Gene3D G3DSA:1.20.140.10 289 498 6.6E-41 T 11-10-2018 AYJ52_01880 f0a2fd665d3885396aa00f72f71dfc45 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 594 2.3E-37 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AYJ52_01880 f0a2fd665d3885396aa00f72f71dfc45 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 7.1E-19 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_01880 f0a2fd665d3885396aa00f72f71dfc45 600 SUPERFAMILY SSF47203 288 476 2.26E-46 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_01880 f0a2fd665d3885396aa00f72f71dfc45 600 Gene3D G3DSA:1.10.540.10 30 160 3.8E-19 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_01880 f0a2fd665d3885396aa00f72f71dfc45 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 32 1.5E-13 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AYJ52_07165 d886365999005cf5131df1be83ef8519 84 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 7.5E-17 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07165 d886365999005cf5131df1be83ef8519 84 Gene3D G3DSA:2.30.170.50 1 83 1.2E-21 T 11-10-2018 AYJ52_07165 d886365999005cf5131df1be83ef8519 84 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.361 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07165 d886365999005cf5131df1be83ef8519 84 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07165 d886365999005cf5131df1be83ef8519 84 SUPERFAMILY SSF143800 1 80 5.89E-22 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_07165 d886365999005cf5131df1be83ef8519 84 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.7E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07165 d886365999005cf5131df1be83ef8519 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.7E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07165 d886365999005cf5131df1be83ef8519 84 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.7E-14 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07165 d886365999005cf5131df1be83ef8519 84 Pfam PF01197 Ribosomal protein L31 1 78 5.3E-24 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_18590 76abbae1af576e20cbf8d61e2e7398fc 214 SUPERFAMILY SSF47240 10 213 2.21E-71 T 11-10-2018 IPR009078 Ferritin-like superfamily AYJ52_18590 76abbae1af576e20cbf8d61e2e7398fc 214 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 59 2.5E-16 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AYJ52_18590 76abbae1af576e20cbf8d61e2e7398fc 214 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 63 210 8.8E-48 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AYJ52_18590 76abbae1af576e20cbf8d61e2e7398fc 214 PIRSF PIRSF020736 1 214 1.2E-86 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AYJ52_18590 76abbae1af576e20cbf8d61e2e7398fc 214 Gene3D G3DSA:1.20.1260.10 6 214 9.8E-74 T 11-10-2018 IPR012347 Ferritin-like AYJ52_04020 b773d9f818029634e5fe4a38620225cd 326 SUPERFAMILY SSF82861 57 142 9.29E-9 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AYJ52_04020 b773d9f818029634e5fe4a38620225cd 326 Gene3D G3DSA:2.30.30.60 159 207 9.5E-15 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AYJ52_04020 b773d9f818029634e5fe4a38620225cd 326 Pfam PF00924 Mechanosensitive ion channel 104 300 1.7E-45 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AYJ52_04020 b773d9f818029634e5fe4a38620225cd 326 SUPERFAMILY SSF82689 213 310 1.44E-26 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AYJ52_04020 b773d9f818029634e5fe4a38620225cd 326 SUPERFAMILY SSF50182 143 205 2.84E-16 T 11-10-2018 IPR010920 LSM domain superfamily AYJ52_04020 b773d9f818029634e5fe4a38620225cd 326 Gene3D G3DSA:3.30.70.100 210 304 2.4E-23 T 11-10-2018 AYJ52_08975 986fdbb1f06a65cbe89f0b2e87be988f 455 SUPERFAMILY SSF53187 39 454 1.39E-68 T 11-10-2018 AYJ52_08975 986fdbb1f06a65cbe89f0b2e87be988f 455 Gene3D G3DSA:3.40.630.10 53 407 2.2E-101 T 11-10-2018 AYJ52_08975 986fdbb1f06a65cbe89f0b2e87be988f 455 Pfam PF01546 Peptidase family M20/M25/M40 109 406 6.8E-16 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AYJ52_08975 986fdbb1f06a65cbe89f0b2e87be988f 455 SUPERFAMILY SSF55031 231 334 2.99E-25 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AYJ52_08975 986fdbb1f06a65cbe89f0b2e87be988f 455 PIRSF PIRSF005962 36 455 1.6E-97 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AYJ52_08975 986fdbb1f06a65cbe89f0b2e87be988f 455 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 53 406 6.4E-75 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AYJ52_08975 986fdbb1f06a65cbe89f0b2e87be988f 455 Pfam PF07687 Peptidase dimerisation domain 236 321 8.0E-8 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AYJ52_08975 986fdbb1f06a65cbe89f0b2e87be988f 455 Gene3D G3DSA:3.30.70.360 229 347 2.2E-101 T 11-10-2018 AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 Gene3D G3DSA:1.20.1640.10 107 303 1.8E-12 T 11-10-2018 AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 SUPERFAMILY SSF82866 113 300 3.27E-39 T 11-10-2018 AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 Pfam PF02355 Protein export membrane protein 124 299 1.1E-61 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 49 292 9.0E-76 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 103 290 1.4E-47 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 1.2E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 PRINTS PR01755 Bacterial translocase SecF protein signature 161 175 1.2E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 PRINTS PR01755 Bacterial translocase SecF protein signature 48 63 1.2E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 PRINTS PR01755 Bacterial translocase SecF protein signature 241 256 1.2E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 21 303 26.685 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AYJ52_02040 9d913affd50e8936b81e273a1823d5eb 320 Pfam PF07549 SecD/SecF GG Motif 43 70 7.1E-10 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AYJ52_13205 8d65a6aed68aa5195fe621c094f5e15c 329 SMART SM00876 220 312 1.7E-42 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AYJ52_13205 8d65a6aed68aa5195fe621c094f5e15c 329 PIRSF PIRSF001619 1 318 2.2E-139 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AYJ52_13205 8d65a6aed68aa5195fe621c094f5e15c 329 Pfam PF04055 Radical SAM superfamily 50 206 1.3E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_13205 8d65a6aed68aa5195fe621c094f5e15c 329 Gene3D G3DSA:3.20.20.70 4 314 8.9E-131 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_13205 8d65a6aed68aa5195fe621c094f5e15c 329 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 5.2E-124 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AYJ52_13205 8d65a6aed68aa5195fe621c094f5e15c 329 SUPERFAMILY SSF102114 5 310 8.5E-91 T 11-10-2018 AYJ52_13205 8d65a6aed68aa5195fe621c094f5e15c 329 SMART SM00729 43 252 8.8E-42 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AYJ52_13205 8d65a6aed68aa5195fe621c094f5e15c 329 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.0E-18 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AYJ52_13205 8d65a6aed68aa5195fe621c094f5e15c 329 Hamap MF_01694 Biotin synthase [bioB]. 5 313 42.829 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AYJ52_12175 82ce2dfb07a84ae03cd233551a167adf 251 SUPERFAMILY SSF47240 5 245 1.68E-75 T 11-10-2018 IPR009078 Ferritin-like superfamily AYJ52_12175 82ce2dfb07a84ae03cd233551a167adf 251 Pfam PF05138 Phenylacetic acid catabolic protein 5 251 3.5E-85 T 11-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 AYJ52_12175 82ce2dfb07a84ae03cd233551a167adf 251 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 14 251 4.7E-90 T 11-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 AYJ52_12175 82ce2dfb07a84ae03cd233551a167adf 251 Gene3D G3DSA:1.20.1260.10 1 251 5.1E-93 T 11-10-2018 IPR012347 Ferritin-like AYJ52_12175 82ce2dfb07a84ae03cd233551a167adf 251 PIRSF PIRSF037834 1 251 1.7E-90 T 11-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 AYJ52_16920 7f77a6cb7aa1fe3af9e5466df0336b35 250 SUPERFAMILY SSF53681 119 228 3.92E-34 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_16920 7f77a6cb7aa1fe3af9e5466df0336b35 250 SUPERFAMILY SSF53681 1 113 2.83E-36 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_16920 7f77a6cb7aa1fe3af9e5466df0336b35 250 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_16920 7f77a6cb7aa1fe3af9e5466df0336b35 250 Gene3D G3DSA:3.40.50.1860 4 223 5.0E-84 T 11-10-2018 AYJ52_16920 7f77a6cb7aa1fe3af9e5466df0336b35 250 Gene3D G3DSA:3.40.50.1860 104 214 5.0E-84 T 11-10-2018 AYJ52_16920 7f77a6cb7aa1fe3af9e5466df0336b35 250 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 232 9.6E-71 T 11-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AYJ52_16920 7f77a6cb7aa1fe3af9e5466df0336b35 250 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 2.8E-59 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_17060 5324eefbb3cc35ff92ce59866fe99d34 172 Pfam PF05229 Spore Coat Protein U domain 26 168 2.4E-27 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_07065 24bbe5d3756aacf097f4e6fc4d695aed 401 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 401 1.8E-144 T 11-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AYJ52_07065 24bbe5d3756aacf097f4e6fc4d695aed 401 Gene3D G3DSA:1.20.81.30 55 170 3.1E-27 T 11-10-2018 AYJ52_07065 24bbe5d3756aacf097f4e6fc4d695aed 401 Gene3D G3DSA:1.20.81.30 254 363 1.9E-26 T 11-10-2018 AYJ52_07065 24bbe5d3756aacf097f4e6fc4d695aed 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 1.9E-30 T 11-10-2018 IPR003004 GspF/PilC family AYJ52_07065 24bbe5d3756aacf097f4e6fc4d695aed 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 1.9E-30 T 11-10-2018 IPR003004 GspF/PilC family AYJ52_07065 24bbe5d3756aacf097f4e6fc4d695aed 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 1.9E-30 T 11-10-2018 IPR003004 GspF/PilC family AYJ52_07065 24bbe5d3756aacf097f4e6fc4d695aed 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 1.9E-30 T 11-10-2018 IPR003004 GspF/PilC family AYJ52_07065 24bbe5d3756aacf097f4e6fc4d695aed 401 Pfam PF00482 Type II secretion system (T2SS), protein F 70 191 6.8E-29 T 11-10-2018 IPR018076 Type II secretion system F domain AYJ52_07065 24bbe5d3756aacf097f4e6fc4d695aed 401 Pfam PF00482 Type II secretion system (T2SS), protein F 271 393 4.2E-29 T 11-10-2018 IPR018076 Type II secretion system F domain AYJ52_07065 24bbe5d3756aacf097f4e6fc4d695aed 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AYJ52_14295 c33bd70d4fb5074d50bb986c5626fe7d 303 Gene3D G3DSA:3.60.15.10 1 303 6.8E-94 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_14295 c33bd70d4fb5074d50bb986c5626fe7d 303 Pfam PF12706 Beta-lactamase superfamily domain 51 270 1.3E-45 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_14295 c33bd70d4fb5074d50bb986c5626fe7d 303 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 303 158.391 T 11-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B AYJ52_14295 c33bd70d4fb5074d50bb986c5626fe7d 303 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 3 303 1.4E-148 T 11-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B AYJ52_14295 c33bd70d4fb5074d50bb986c5626fe7d 303 SUPERFAMILY SSF56281 1 303 8.31E-63 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_02445 3b5caa6e9a7329435d3e7d0a080e5913 191 SUPERFAMILY SSF53271 4 189 1.27E-44 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AYJ52_02445 3b5caa6e9a7329435d3e7d0a080e5913 191 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 191 7.0E-86 T 11-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 AYJ52_02445 3b5caa6e9a7329435d3e7d0a080e5913 191 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 42.026 T 11-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 AYJ52_02445 3b5caa6e9a7329435d3e7d0a080e5913 191 Gene3D G3DSA:3.40.50.2020 3 188 2.2E-52 T 11-10-2018 AYJ52_17840 f894a9810643ea60ff842afb06f849fc 383 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 112 311 2.6E-23 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AYJ52_17840 f894a9810643ea60ff842afb06f849fc 383 Gene3D G3DSA:3.40.640.10 44 287 2.4E-53 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_17840 f894a9810643ea60ff842afb06f849fc 383 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 226 247 - T 11-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 AYJ52_17840 f894a9810643ea60ff842afb06f849fc 383 Hamap MF_00609 Histidine decarboxylase [hdc]. 2 374 68.002 T 11-10-2018 IPR023523 Histidine decarboxylase, bacteria GO:0004398|GO:0030170 KEGG: 00340+4.1.1.22|MetaCyc: PWY-6173 AYJ52_17840 f894a9810643ea60ff842afb06f849fc 383 SUPERFAMILY SSF53383 35 370 2.45E-74 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 1.6E-28 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 SUPERFAMILY SSF56645 6 243 1.05E-76 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 SUPERFAMILY SSF47203 229 380 1.61E-55 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 378 1.2E-48 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 Gene3D G3DSA:2.40.110.10 120 236 4.6E-42 T 11-10-2018 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 Gene3D G3DSA:1.20.140.10 237 383 3.3E-55 T 11-10-2018 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 PIRSF PIRSF016578 109 381 4.3E-13 T 11-10-2018 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 PIRSF PIRSF016578 2 84 8.3E-5 T 11-10-2018 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.9E-27 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_12310 fabbf7264a99511810ce5010ebf639fa 383 Gene3D G3DSA:1.10.540.10 4 119 3.9E-28 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_05970 ded94e5c4d8ae11e0865e676b43eab19 332 TIGRFAM TIGR01139 cysK: cysteine synthase A 22 326 4.1E-131 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AYJ52_05970 ded94e5c4d8ae11e0865e676b43eab19 332 Gene3D G3DSA:3.40.50.1100 58 160 3.2E-122 T 11-10-2018 AYJ52_05970 ded94e5c4d8ae11e0865e676b43eab19 332 TIGRFAM TIGR01136 cysKM: cysteine synthase 22 326 3.7E-126 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AYJ52_05970 ded94e5c4d8ae11e0865e676b43eab19 332 SUPERFAMILY SSF53686 18 325 1.83E-97 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_05970 ded94e5c4d8ae11e0865e676b43eab19 332 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 46 64 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AYJ52_05970 ded94e5c4d8ae11e0865e676b43eab19 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 1.1E-64 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_05970 ded94e5c4d8ae11e0865e676b43eab19 332 Gene3D G3DSA:3.40.50.1100 25 321 3.2E-122 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.2E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.2E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.2E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 PRINTS PR00702 Acriflavin resistance protein family signature 560 577 2.2E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.2E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 2.2E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 2.2E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 2.2E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 PRINTS PR00702 Acriflavin resistance protein family signature 629 643 2.2E-92 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 Gene3D G3DSA:3.30.2090.10 729 817 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 SUPERFAMILY SSF82693 41 134 2.51E-26 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 Gene3D G3DSA:1.20.1640.10 10 520 0.0 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 Gene3D G3DSA:3.30.2090.10 181 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 SUPERFAMILY SSF82714 185 271 9.94E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 Gene3D G3DSA:3.30.70.1430 575 676 0.0 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1046 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 SUPERFAMILY SSF82866 297 497 2.62E-53 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 SUPERFAMILY SSF82866 839 1034 1.57E-44 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 SUPERFAMILY SSF82693 573 679 6.28E-28 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 SUPERFAMILY SSF82714 730 817 2.22E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 Pfam PF00873 AcrB/AcrD/AcrF family 3 1035 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 Gene3D G3DSA:3.30.70.1430 40 825 0.0 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 SUPERFAMILY SSF82693 680 865 4.97E-26 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 Gene3D G3DSA:3.30.70.1320 135 333 0.0 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 Gene3D G3DSA:1.20.1640.10 521 1031 0.0 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 SUPERFAMILY SSF82693 139 331 5.75E-26 T 11-10-2018 AYJ52_17485 9d24390ff4b61befe1139f151fe3c04c 1059 Gene3D G3DSA:3.30.70.1440 677 874 0.0 T 11-10-2018 AYJ52_18365 d416035763c5cdf79212e7b7a9e05b99 127 Pfam PF11342 Protein of unknown function (DUF3144) 20 105 6.8E-31 T 11-10-2018 IPR021490 Protein of unknown function DUF3144 AYJ52_17525 70bf0bdb8d5569bc68858c5575d77462 257 PIRSF PIRSF006648 1 254 1.6E-20 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AYJ52_17525 70bf0bdb8d5569bc68858c5575d77462 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 177 196 4.9E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AYJ52_17525 70bf0bdb8d5569bc68858c5575d77462 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 59 81 4.9E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AYJ52_17525 70bf0bdb8d5569bc68858c5575d77462 257 PRINTS PR00164 ABC-2 type transport system membrane protein signature 197 216 4.9E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AYJ52_17525 70bf0bdb8d5569bc68858c5575d77462 257 Pfam PF01061 ABC-2 type transporter 10 219 2.5E-35 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AYJ52_09430 59dde1e2785736a91dfac34b0e904717 214 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 176 2.6E-50 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AYJ52_09430 59dde1e2785736a91dfac34b0e904717 214 SUPERFAMILY SSF52540 1 201 5.88E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09430 59dde1e2785736a91dfac34b0e904717 214 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 207 25.256 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AYJ52_09430 59dde1e2785736a91dfac34b0e904717 214 PIRSF PIRSF006755 3 208 4.6E-59 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AYJ52_09430 59dde1e2785736a91dfac34b0e904717 214 Pfam PF13500 AAA domain 6 177 3.6E-34 T 11-10-2018 AYJ52_09430 59dde1e2785736a91dfac34b0e904717 214 Gene3D G3DSA:3.40.50.300 1 205 3.4E-55 T 11-10-2018 AYJ52_14085 1d41d26172ea28f0a364a13ae5d48f70 449 PIRSF PIRSF004810 4 449 1.6E-129 T 11-10-2018 IPR014047 Chromate transporter, long chain AYJ52_14085 1d41d26172ea28f0a364a13ae5d48f70 449 TIGRFAM TIGR00937 2A51: chromate efflux transporter 25 442 4.2E-73 T 11-10-2018 IPR014047 Chromate transporter, long chain AYJ52_14085 1d41d26172ea28f0a364a13ae5d48f70 449 Pfam PF02417 Chromate transporter 18 182 3.2E-37 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AYJ52_14085 1d41d26172ea28f0a364a13ae5d48f70 449 Pfam PF02417 Chromate transporter 258 442 2.3E-32 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AYJ52_02315 3ae9681ef7a21c3f988a512a58438c01 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 3.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_02315 3ae9681ef7a21c3f988a512a58438c01 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 3.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_02315 3ae9681ef7a21c3f988a512a58438c01 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 3.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_02315 3ae9681ef7a21c3f988a512a58438c01 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 3.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_02315 3ae9681ef7a21c3f988a512a58438c01 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_02315 3ae9681ef7a21c3f988a512a58438c01 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 3.8E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_02315 3ae9681ef7a21c3f988a512a58438c01 295 Gene3D G3DSA:3.40.50.720 2 283 5.8E-79 T 11-10-2018 AYJ52_02315 3ae9681ef7a21c3f988a512a58438c01 295 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 254 3.0E-55 T 11-10-2018 AYJ52_02315 3ae9681ef7a21c3f988a512a58438c01 295 SUPERFAMILY SSF51735 14 255 9.15E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_15195 b2e2ac592395c5a60b10256c78f01aa6 137 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 2.5E-51 T 11-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 AYJ52_15195 b2e2ac592395c5a60b10256c78f01aa6 137 Gene3D G3DSA:1.20.1290.10 4 125 1.1E-41 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AYJ52_15195 b2e2ac592395c5a60b10256c78f01aa6 137 SUPERFAMILY SSF69118 3 131 1.83E-38 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AYJ52_15195 b2e2ac592395c5a60b10256c78f01aa6 137 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 119 1.5E-24 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 SUPERFAMILY SSF52218 406 553 1.14E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 Gene3D G3DSA:1.20.990.10 562 691 1.4E-5 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 Gene3D G3DSA:3.40.50.360 380 561 4.6E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 Pfam PF03929 PepSY-associated TM region 7 382 1.6E-63 T 11-10-2018 IPR005625 PepSY-associated TM protein AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 SUPERFAMILY SSF63380 564 721 6.41E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 SUPERFAMILY SSF52343 723 862 8.77E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 Pfam PF00258 Flavodoxin 410 535 1.2E-24 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 754 763 2.1E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 798 814 2.1E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 821 829 2.1E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 730 749 2.1E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 666 673 2.1E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 Gene3D G3DSA:3.40.50.80 720 862 4.5E-39 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 Pfam PF00175 Oxidoreductase NAD-binding domain 732 836 4.4E-10 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 PRINTS PR00369 Flavodoxin signature 409 422 5.3E-9 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 PRINTS PR00369 Flavodoxin signature 488 498 5.3E-9 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 PRINTS PR00369 Flavodoxin signature 513 532 5.3E-9 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AYJ52_01380 c36186bc945c20e47fc266fdedd90424 862 PRINTS PR00369 Flavodoxin signature 457 468 5.3E-9 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AYJ52_15525 d703f8bec73d80251a1b6b85fe453c4c 286 PIRSF PIRSF037442 1 286 1.5E-71 T 11-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AYJ52_15525 d703f8bec73d80251a1b6b85fe453c4c 286 SUPERFAMILY SSF53474 4 269 5.99E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15525 d703f8bec73d80251a1b6b85fe453c4c 286 Gene3D G3DSA:3.40.50.1820 3 281 1.4E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15525 d703f8bec73d80251a1b6b85fe453c4c 286 Pfam PF00561 alpha/beta hydrolase fold 32 120 2.8E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_17900 52276ef8428f97642717243f375cd946 286 SUPERFAMILY SSF63380 26 129 4.13E-5 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_17900 52276ef8428f97642717243f375cd946 286 Pfam PF08021 Siderophore-interacting FAD-binding domain 69 125 2.5E-13 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AYJ52_17900 52276ef8428f97642717243f375cd946 286 Gene3D G3DSA:3.40.50.80 132 272 1.2E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_17900 52276ef8428f97642717243f375cd946 286 Gene3D G3DSA:2.40.30.10 22 126 6.8E-15 T 11-10-2018 AYJ52_17900 52276ef8428f97642717243f375cd946 286 Pfam PF04954 Siderophore-interacting protein 136 252 7.3E-23 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AYJ52_16955 dab80c7f40274b6904e100a450f38395 399 Gene3D G3DSA:3.40.50.150 129 398 4.2E-98 T 11-10-2018 AYJ52_16955 dab80c7f40274b6904e100a450f38395 399 Pfam PF02353 Mycolic acid cyclopropane synthetase 125 388 5.0E-82 T 11-10-2018 AYJ52_16955 dab80c7f40274b6904e100a450f38395 399 SUPERFAMILY SSF53335 16 350 1.14E-76 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_16955 dab80c7f40274b6904e100a450f38395 399 PIRSF PIRSF003085 10 398 9.6E-119 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AYJ52_03370 2e6628e78d694cc4b11260401f2a3043 318 Pfam PF01545 Cation efflux family 22 213 5.0E-50 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_03370 2e6628e78d694cc4b11260401f2a3043 318 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 291 9.6E-89 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_03370 2e6628e78d694cc4b11260401f2a3043 318 SUPERFAMILY SSF161111 19 214 4.84E-59 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_03370 2e6628e78d694cc4b11260401f2a3043 318 SUPERFAMILY SSF160240 218 289 5.75E-6 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AYJ52_03370 2e6628e78d694cc4b11260401f2a3043 318 Gene3D G3DSA:1.20.1510.10 19 213 3.0E-48 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_15025 bd8e398495a17abdee85a8832b14f5be 495 SUPERFAMILY SSF53720 7 494 7.46E-150 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_15025 bd8e398495a17abdee85a8832b14f5be 495 Gene3D G3DSA:3.40.605.10 22 489 3.0E-163 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_15025 bd8e398495a17abdee85a8832b14f5be 495 Pfam PF00171 Aldehyde dehydrogenase family 33 491 5.2E-152 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_15025 bd8e398495a17abdee85a8832b14f5be 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 268 275 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_15025 bd8e398495a17abdee85a8832b14f5be 495 Gene3D G3DSA:3.40.309.10 273 461 3.0E-163 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_05570 e80956b15dd0f007bf08e603a813787e 421 SUPERFAMILY SSF54373 270 359 7.98E-17 T 11-10-2018 AYJ52_05570 e80956b15dd0f007bf08e603a813787e 421 SUPERFAMILY SSF51905 1 416 1.55E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_05570 e80956b15dd0f007bf08e603a813787e 421 Gene3D G3DSA:3.30.9.10 134 361 6.0E-54 T 11-10-2018 AYJ52_05570 e80956b15dd0f007bf08e603a813787e 421 Gene3D G3DSA:3.50.50.60 105 403 6.0E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_05570 e80956b15dd0f007bf08e603a813787e 421 Pfam PF01266 FAD dependent oxidoreductase 2 396 6.8E-73 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AYJ52_05570 e80956b15dd0f007bf08e603a813787e 421 Gene3D G3DSA:3.50.50.60 1 78 7.0E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_05570 e80956b15dd0f007bf08e603a813787e 421 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 47.989 T 11-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AYJ52_13725 d4cc1198762bc5e5fa107b9c0c140f4e 157 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AYJ52_13725 d4cc1198762bc5e5fa107b9c0c140f4e 157 Pfam PF02082 Transcriptional regulator 1 83 5.4E-31 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AYJ52_13725 d4cc1198762bc5e5fa107b9c0c140f4e 157 Gene3D G3DSA:1.10.10.10 1 144 4.1E-53 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_13725 d4cc1198762bc5e5fa107b9c0c140f4e 157 SUPERFAMILY SSF46785 2 132 2.41E-38 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_13725 d4cc1198762bc5e5fa107b9c0c140f4e 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.2E-46 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AYJ52_08200 6085d952993c346b224cc193c82bc64d 169 Gene3D G3DSA:3.90.1720.10 52 168 5.6E-30 T 11-10-2018 AYJ52_16820 93883264c80bae50b99044e6e0f8f38e 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_16820 93883264c80bae50b99044e6e0f8f38e 341 Gene3D G3DSA:3.30.70.260 233 338 8.2E-30 T 11-10-2018 AYJ52_16820 93883264c80bae50b99044e6e0f8f38e 341 Gene3D G3DSA:3.40.50.300 1 232 7.0E-75 T 11-10-2018 AYJ52_16820 93883264c80bae50b99044e6e0f8f38e 341 SMART SM00382 30 227 1.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_16820 93883264c80bae50b99044e6e0f8f38e 341 SMART SM00930 262 337 3.3E-21 T 11-10-2018 IPR018449 NIL domain AYJ52_16820 93883264c80bae50b99044e6e0f8f38e 341 SUPERFAMILY SSF52540 1 240 1.77E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16820 93883264c80bae50b99044e6e0f8f38e 341 SUPERFAMILY SSF55021 250 334 9.73E-22 T 11-10-2018 AYJ52_16820 93883264c80bae50b99044e6e0f8f38e 341 Pfam PF00005 ABC transporter 21 169 3.5E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_16820 93883264c80bae50b99044e6e0f8f38e 341 Pfam PF09383 NIL domain 266 334 2.8E-20 T 11-10-2018 IPR018449 NIL domain AYJ52_12145 d99f0acb5a491bc3daec42fc8741df47 144 Pfam PF11720 Peptidase inhibitor I78 family 81 144 1.1E-10 T 11-10-2018 IPR021719 Proteinase inhibitor I78 AYJ52_12145 d99f0acb5a491bc3daec42fc8741df47 144 Gene3D G3DSA:3.30.10.10 77 143 2.1E-19 T 11-10-2018 AYJ52_12145 d99f0acb5a491bc3daec42fc8741df47 144 Pfam PF03891 Domain of unknown function (DUF333) 33 76 2.6E-22 T 11-10-2018 IPR005590 Protein of unknown function DUF333 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 Pfam PF00364 Biotin-requiring enzyme 6 77 3.3E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 285 511 5.7E-82 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 SUPERFAMILY SSF47005 218 261 1.23E-9 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 Gene3D G3DSA:2.40.50.100 1 119 5.6E-26 T 11-10-2018 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 Gene3D G3DSA:3.30.559.10 271 510 1.4E-87 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 SUPERFAMILY SSF51230 4 92 4.19E-23 T 11-10-2018 IPR011053 Single hybrid motif AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 Pfam PF02817 e3 binding domain 224 259 4.1E-10 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 Pfam PF02817 e3 binding domain 159 193 3.7E-10 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 SUPERFAMILY SSF47005 153 197 1.29E-9 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 Gene3D G3DSA:4.10.320.10 224 265 2.4E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 Gene3D G3DSA:4.10.320.10 159 200 4.0E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 SUPERFAMILY SSF52777 281 511 8.01E-78 T 11-10-2018 AYJ52_14015 700d48e246cc3ddbf0574e970d1d1946 512 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AYJ52_12390 5636ce04d8299c0a5cb96b672a69d272 406 Pfam PF07690 Major Facilitator Superfamily 25 275 5.8E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_12390 5636ce04d8299c0a5cb96b672a69d272 406 SUPERFAMILY SSF103473 16 387 5.89E-43 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_12390 5636ce04d8299c0a5cb96b672a69d272 406 Gene3D G3DSA:1.20.1250.20 13 387 2.8E-38 T 11-10-2018 AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 Gene3D G3DSA:3.55.50.10 111 221 2.4E-44 T 11-10-2018 AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 591 2.8E-56 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 Gene3D G3DSA:3.30.1920.30 254 336 2.4E-44 T 11-10-2018 AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 Gene3D G3DSA:2.40.50.230 432 541 1.2E-30 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 SUPERFAMILY SSF69279 24 203 2.04E-41 T 11-10-2018 AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 697 844 1.2E-46 T 11-10-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 565 671 1.3E-37 T 11-10-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 SUPERFAMILY SSF69255 442 535 4.97E-24 T 11-10-2018 AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 Pfam PF05954 Phage late control gene D protein (GPD) 43 385 1.1E-60 T 11-10-2018 AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 25 589 5.3E-67 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AYJ52_05450 cedb6a575bb8d73c27f03742177ffd47 926 Gene3D G3DSA:2.30.110.50 30 381 2.4E-44 T 11-10-2018 AYJ52_06005 ef0910287890aa0cb4798ad918c6fcb4 792 SUPERFAMILY SSF102114 407 671 7.19E-11 T 11-10-2018 AYJ52_06005 ef0910287890aa0cb4798ad918c6fcb4 792 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 30 684 49.104 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 AYJ52_06005 ef0910287890aa0cb4798ad918c6fcb4 792 SMART SM00729 414 664 4.6E-9 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AYJ52_06005 ef0910287890aa0cb4798ad918c6fcb4 792 Pfam PF04055 Radical SAM superfamily 418 621 1.4E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_06005 ef0910287890aa0cb4798ad918c6fcb4 792 Gene3D G3DSA:3.80.30.20 414 676 8.1E-14 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AYJ52_06005 ef0910287890aa0cb4798ad918c6fcb4 792 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 418 438 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AYJ52_06005 ef0910287890aa0cb4798ad918c6fcb4 792 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 30 682 3.2E-257 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 AYJ52_06005 ef0910287890aa0cb4798ad918c6fcb4 792 Pfam PF11842 Domain of unknown function (DUF3362) 632 772 4.5E-63 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AYJ52_06005 ef0910287890aa0cb4798ad918c6fcb4 792 Pfam PF08497 Radical SAM N-terminal 30 417 4.5E-141 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AYJ52_17365 ca2cb6041fd2a6be1c17e70509d2775e 90 Pfam PF07023 Protein of unknown function (DUF1315) 4 83 4.2E-34 T 11-10-2018 IPR009749 Protein of unknown function DUF1315 AYJ52_03590 c6c6225c79266c55a37703c30cdb3a55 359 SMART SM00892 79 268 5.0E-43 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AYJ52_03590 c6c6225c79266c55a37703c30cdb3a55 359 Gene3D G3DSA:3.40.570.10 63 282 1.8E-56 T 11-10-2018 AYJ52_03590 c6c6225c79266c55a37703c30cdb3a55 359 Pfam PF01223 DNA/RNA non-specific endonuclease 72 262 7.5E-43 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AYJ52_03590 c6c6225c79266c55a37703c30cdb3a55 359 SUPERFAMILY SSF54060 54 275 4.83E-64 T 11-10-2018 AYJ52_03590 c6c6225c79266c55a37703c30cdb3a55 359 SMART SM00477 80 268 4.2E-38 T 11-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AYJ52_03590 c6c6225c79266c55a37703c30cdb3a55 359 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 139 147 - T 11-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 AYJ52_10240 41656f92e346e72aae81b14bebede31b 440 Hamap MF_00313 Glutaminase [glsA]. 5 304 40.223 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AYJ52_10240 41656f92e346e72aae81b14bebede31b 440 Gene3D G3DSA:3.30.750.24 310 406 2.2E-22 T 11-10-2018 IPR036513 STAS domain superfamily AYJ52_10240 41656f92e346e72aae81b14bebede31b 440 SUPERFAMILY SSF52091 327 419 6.67E-8 T 11-10-2018 IPR036513 STAS domain superfamily AYJ52_10240 41656f92e346e72aae81b14bebede31b 440 Pfam PF04960 Glutaminase 22 303 2.6E-113 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AYJ52_10240 41656f92e346e72aae81b14bebede31b 440 Gene3D G3DSA:3.40.710.10 1 306 2.5E-119 T 11-10-2018 AYJ52_10240 41656f92e346e72aae81b14bebede31b 440 SUPERFAMILY SSF56601 3 304 5.64E-109 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_10240 41656f92e346e72aae81b14bebede31b 440 TIGRFAM TIGR03814 Gln_ase: glutaminase A 17 303 2.5E-101 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AYJ52_05030 d7c1a061b781177e1db3b7d179a1697f 430 SUPERFAMILY SSF53955 46 351 2.62E-96 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_05030 d7c1a061b781177e1db3b7d179a1697f 430 Gene3D G3DSA:1.10.101.10 351 424 8.1E-10 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AYJ52_05030 d7c1a061b781177e1db3b7d179a1697f 430 SUPERFAMILY SSF47090 351 426 7.85E-17 T 11-10-2018 IPR036365 PGBD-like superfamily AYJ52_05030 d7c1a061b781177e1db3b7d179a1697f 430 Pfam PF01471 Putative peptidoglycan binding domain 365 419 1.0E-10 T 11-10-2018 IPR002477 Peptidoglycan binding-like AYJ52_05030 d7c1a061b781177e1db3b7d179a1697f 430 Pfam PF13406 Transglycosylase SLT domain 49 344 1.9E-104 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 AYJ52_05030 d7c1a061b781177e1db3b7d179a1697f 430 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 48 348 1.7E-109 T 11-10-2018 IPR011970 Lytic murein transglycosylase AYJ52_05030 d7c1a061b781177e1db3b7d179a1697f 430 Gene3D G3DSA:1.10.8.350 64 224 1.4E-81 T 11-10-2018 AYJ52_05030 d7c1a061b781177e1db3b7d179a1697f 430 Gene3D G3DSA:1.10.530.10 91 343 1.4E-81 T 11-10-2018 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 Hamap MF_01201 Alanine racemase. 3 358 30.773 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 PRINTS PR00992 Alanine racemase signature 251 266 6.6E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 PRINTS PR00992 Alanine racemase signature 28 44 6.6E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 PRINTS PR00992 Alanine racemase signature 340 353 6.6E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 PRINTS PR00992 Alanine racemase signature 268 283 6.6E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 PRINTS PR00992 Alanine racemase signature 125 137 6.6E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 PRINTS PR00992 Alanine racemase signature 157 168 6.6E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 PRINTS PR00992 Alanine racemase signature 289 306 6.6E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 PRINTS PR00992 Alanine racemase signature 62 80 6.6E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 PRINTS PR00992 Alanine racemase signature 194 221 6.6E-59 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 Gene3D G3DSA:2.40.37.10 10 352 6.4E-134 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 Pfam PF00842 Alanine racemase, C-terminal domain 235 355 1.6E-37 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 SUPERFAMILY SSF50621 228 356 3.42E-43 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 Pfam PF01168 Alanine racemase, N-terminal domain 10 221 2.4E-57 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 TIGRFAM TIGR00492 alr: alanine racemase 4 355 7.9E-97 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 SMART SM01005 235 358 3.3E-56 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 SUPERFAMILY SSF51419 10 236 4.25E-59 T 11-10-2018 IPR029066 PLP-binding barrel AYJ52_16750 6632e2763d5877e7d9881e4434c0fb50 358 Gene3D G3DSA:3.20.20.10 12 219 6.4E-134 T 11-10-2018 IPR029066 PLP-binding barrel AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 Pfam PF01926 50S ribosome-binding GTPase 218 311 1.6E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 Gene3D G3DSA:3.40.50.300 217 379 2.4E-101 T 11-10-2018 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 SUPERFAMILY SSF52540 72 370 4.67E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 451 32.321 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 4.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 286 304 4.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 Gene3D G3DSA:3.30.1360.120 1 121 3.1E-40 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 370 3.5E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 3.2E-36 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 SUPERFAMILY SSF116878 121 451 2.48E-49 T 11-10-2018 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 Gene3D G3DSA:1.20.120.430 122 451 2.4E-101 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 Pfam PF12631 MnmE helical domain 123 448 3.0E-55 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AYJ52_04940 ef7075074252428a2db88af50bdbd675 451 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 451 2.3E-103 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AYJ52_12130 b3453fa6e9babe376f5ff9c539876ff4 219 Pfam PF02677 Uncharacterized BCR, COG1636 17 191 4.7E-64 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 AYJ52_12130 b3453fa6e9babe376f5ff9c539876ff4 219 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 17 193 33.354 T 11-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 AYJ52_15365 2b9b0959a2ead1ecde80969ad340a551 223 SUPERFAMILY SSF100950 7 149 7.67E-44 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_15365 2b9b0959a2ead1ecde80969ad340a551 223 Gene3D G3DSA:3.30.70.260 127 198 1.2E-72 T 11-10-2018 AYJ52_15365 2b9b0959a2ead1ecde80969ad340a551 223 Gene3D G3DSA:3.40.50.1360 11 212 1.2E-72 T 11-10-2018 AYJ52_15365 2b9b0959a2ead1ecde80969ad340a551 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 51 216 5.1E-59 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AYJ52_15365 2b9b0959a2ead1ecde80969ad340a551 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 10 217 5.6E-64 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AYJ52_15365 2b9b0959a2ead1ecde80969ad340a551 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 7 220 32.901 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AYJ52_15365 2b9b0959a2ead1ecde80969ad340a551 223 SUPERFAMILY SSF75445 131 201 2.88E-23 T 11-10-2018 AYJ52_07320 b9e51a7f077fe0d38a8edfdeab13a9e2 359 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 353 7.2E-156 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AYJ52_07320 b9e51a7f077fe0d38a8edfdeab13a9e2 359 SUPERFAMILY SSF53659 1 358 1.23E-120 T 11-10-2018 AYJ52_07320 b9e51a7f077fe0d38a8edfdeab13a9e2 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 354 2.2E-137 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AYJ52_07320 b9e51a7f077fe0d38a8edfdeab13a9e2 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AYJ52_07320 b9e51a7f077fe0d38a8edfdeab13a9e2 359 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 358 51.533 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AYJ52_07320 b9e51a7f077fe0d38a8edfdeab13a9e2 359 Gene3D G3DSA:3.40.718.10 2 359 2.0E-145 T 11-10-2018 AYJ52_07320 b9e51a7f077fe0d38a8edfdeab13a9e2 359 SMART SM01329 4 354 8.1E-201 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AYJ52_16690 2ae5167928502102a3f039d07a6b8871 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 8 277 75.656 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AYJ52_16690 2ae5167928502102a3f039d07a6b8871 278 Pfam PF03618 Kinase/pyrophosphorylase 11 268 1.9E-76 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AYJ52_05800 4fee612922b89faeb6a5ec9d2378a2fb 269 Gene3D G3DSA:1.10.3470.10 33 268 1.3E-7 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AYJ52_05800 4fee612922b89faeb6a5ec9d2378a2fb 269 Pfam PF00950 ABC 3 transport family 6 259 6.3E-53 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AYJ52_05800 4fee612922b89faeb6a5ec9d2378a2fb 269 SUPERFAMILY SSF81345 4 256 7.19E-33 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AYJ52_17500 f91e58cc72e14e292c4becea3f369179 409 Gene3D G3DSA:3.40.50.1820 39 285 1.7E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17500 f91e58cc72e14e292c4becea3f369179 409 PIRSF PIRSF029171 1 409 3.8E-85 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AYJ52_17500 f91e58cc72e14e292c4becea3f369179 409 Pfam PF03583 Secretory lipase 118 369 2.5E-10 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AYJ52_17500 f91e58cc72e14e292c4becea3f369179 409 SUPERFAMILY SSF53474 81 391 6.95E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_12960 d3d5799bc2d7bee305c3a8e6d01708ef 402 Gene3D G3DSA:3.30.1490.20 125 198 2.2E-31 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AYJ52_12960 d3d5799bc2d7bee305c3a8e6d01708ef 402 SUPERFAMILY SSF51246 328 398 1.0E-15 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AYJ52_12960 d3d5799bc2d7bee305c3a8e6d01708ef 402 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 15 399 4.9E-169 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AYJ52_12960 d3d5799bc2d7bee305c3a8e6d01708ef 402 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 9 399 50.337 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AYJ52_12960 d3d5799bc2d7bee305c3a8e6d01708ef 402 Gene3D G3DSA:3.40.50.20 3 124 3.4E-49 T 11-10-2018 AYJ52_12960 d3d5799bc2d7bee305c3a8e6d01708ef 402 Pfam PF02222 ATP-grasp domain 125 303 6.9E-51 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AYJ52_12960 d3d5799bc2d7bee305c3a8e6d01708ef 402 SUPERFAMILY SSF52440 4 114 5.18E-29 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_12960 d3d5799bc2d7bee305c3a8e6d01708ef 402 SUPERFAMILY SSF56059 115 321 1.94E-55 T 11-10-2018 AYJ52_12960 d3d5799bc2d7bee305c3a8e6d01708ef 402 Gene3D G3DSA:3.30.470.20 199 402 1.2E-59 T 11-10-2018 AYJ52_06040 715ad5d950672cbdd56941435fd9adb8 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 232 344 3.1E-13 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AYJ52_06040 715ad5d950672cbdd56941435fd9adb8 351 Gene3D G3DSA:3.30.70.270 4 163 1.7E-62 T 11-10-2018 AYJ52_06040 715ad5d950672cbdd56941435fd9adb8 351 Pfam PF11798 IMS family HHH motif 168 195 5.0E-8 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AYJ52_06040 715ad5d950672cbdd56941435fd9adb8 351 SUPERFAMILY SSF100879 237 336 1.41E-20 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AYJ52_06040 715ad5d950672cbdd56941435fd9adb8 351 SUPERFAMILY SSF56672 1 233 2.05E-91 T 11-10-2018 AYJ52_06040 715ad5d950672cbdd56941435fd9adb8 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 350 36.854 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AYJ52_06040 715ad5d950672cbdd56941435fd9adb8 351 Gene3D G3DSA:3.30.1490.100 239 347 1.2E-18 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AYJ52_06040 715ad5d950672cbdd56941435fd9adb8 351 Pfam PF00817 impB/mucB/samB family 7 153 4.3E-51 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AYJ52_06040 715ad5d950672cbdd56941435fd9adb8 351 Gene3D G3DSA:1.10.150.20 165 227 6.1E-20 T 11-10-2018 AYJ52_06040 715ad5d950672cbdd56941435fd9adb8 351 Gene3D G3DSA:2.30.40.20 21 72 1.7E-62 T 11-10-2018 AYJ52_10755 cf5cce740a06a58170468a9a95556569 344 Pfam PF01979 Amidohydrolase family 11 311 1.2E-16 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AYJ52_10755 cf5cce740a06a58170468a9a95556569 344 Gene3D G3DSA:3.20.20.140 2 343 5.8E-105 T 11-10-2018 AYJ52_10755 cf5cce740a06a58170468a9a95556569 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 4.5E-137 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_10755 cf5cce740a06a58170468a9a95556569 344 PIRSF PIRSF001237 1 344 9.5E-142 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_10755 cf5cce740a06a58170468a9a95556569 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_10755 cf5cce740a06a58170468a9a95556569 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_10755 cf5cce740a06a58170468a9a95556569 344 SUPERFAMILY SSF51556 2 342 1.94E-141 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_10755 cf5cce740a06a58170468a9a95556569 344 Hamap MF_00219 Dihydroorotase [pyrC]. 2 344 45.347 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AYJ52_11900 f852919aeaeef2f1547f741278d7c7e5 169 SUPERFAMILY SSF46689 59 164 2.51E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11900 f852919aeaeef2f1547f741278d7c7e5 169 SUPERFAMILY SSF48295 4 60 8.37E-10 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_11900 f852919aeaeef2f1547f741278d7c7e5 169 Pfam PF13518 Helix-turn-helix domain 11 55 2.5E-7 T 11-10-2018 AYJ52_11900 f852919aeaeef2f1547f741278d7c7e5 169 Pfam PF13518 Helix-turn-helix domain 67 113 2.9E-7 T 11-10-2018 AYJ52_11925 f852919aeaeef2f1547f741278d7c7e5 169 SUPERFAMILY SSF46689 59 164 2.51E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11925 f852919aeaeef2f1547f741278d7c7e5 169 SUPERFAMILY SSF48295 4 60 8.37E-10 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_11925 f852919aeaeef2f1547f741278d7c7e5 169 Pfam PF13518 Helix-turn-helix domain 11 55 2.5E-7 T 11-10-2018 AYJ52_11925 f852919aeaeef2f1547f741278d7c7e5 169 Pfam PF13518 Helix-turn-helix domain 67 113 2.9E-7 T 11-10-2018 AYJ52_10820 f852919aeaeef2f1547f741278d7c7e5 169 SUPERFAMILY SSF46689 59 164 2.51E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_10820 f852919aeaeef2f1547f741278d7c7e5 169 SUPERFAMILY SSF48295 4 60 8.37E-10 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_10820 f852919aeaeef2f1547f741278d7c7e5 169 Pfam PF13518 Helix-turn-helix domain 11 55 2.5E-7 T 11-10-2018 AYJ52_10820 f852919aeaeef2f1547f741278d7c7e5 169 Pfam PF13518 Helix-turn-helix domain 67 113 2.9E-7 T 11-10-2018 AYJ52_03680 f852919aeaeef2f1547f741278d7c7e5 169 SUPERFAMILY SSF46689 59 164 2.51E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_03680 f852919aeaeef2f1547f741278d7c7e5 169 SUPERFAMILY SSF48295 4 60 8.37E-10 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AYJ52_03680 f852919aeaeef2f1547f741278d7c7e5 169 Pfam PF13518 Helix-turn-helix domain 11 55 2.5E-7 T 11-10-2018 AYJ52_03680 f852919aeaeef2f1547f741278d7c7e5 169 Pfam PF13518 Helix-turn-helix domain 67 113 2.9E-7 T 11-10-2018 AYJ52_06410 358c32bb6b07892aaafb64dd0ad19277 335 SUPERFAMILY SSF56601 81 328 2.09E-57 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_06410 358c32bb6b07892aaafb64dd0ad19277 335 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 196 209 2.9E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AYJ52_06410 358c32bb6b07892aaafb64dd0ad19277 335 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 128 2.9E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AYJ52_06410 358c32bb6b07892aaafb64dd0ad19277 335 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 169 186 2.9E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AYJ52_06410 358c32bb6b07892aaafb64dd0ad19277 335 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 85 311 2.3E-59 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AYJ52_06410 358c32bb6b07892aaafb64dd0ad19277 335 Gene3D G3DSA:3.40.710.10 67 334 1.3E-67 T 11-10-2018 AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 Gene3D G3DSA:3.30.1370.120 191 258 6.5E-15 T 11-10-2018 IPR038591 NolW-like superfamily AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 Gene3D G3DSA:3.30.1370.120 26 186 2.5E-52 T 11-10-2018 IPR038591 NolW-like superfamily AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 Pfam PF00263 Bacterial type II and III secretion system protein 486 649 1.4E-48 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 PRINTS PR00811 Bacterial general secretion pathway protein D signature 614 632 2.1E-34 T 11-10-2018 IPR001775 GspD/PilQ family AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 PRINTS PR00811 Bacterial general secretion pathway protein D signature 517 527 2.1E-34 T 11-10-2018 IPR001775 GspD/PilQ family AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 506 2.1E-34 T 11-10-2018 IPR001775 GspD/PilQ family AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 PRINTS PR00811 Bacterial general secretion pathway protein D signature 637 651 2.1E-34 T 11-10-2018 IPR001775 GspD/PilQ family AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 PRINTS PR00811 Bacterial general secretion pathway protein D signature 394 404 2.1E-34 T 11-10-2018 IPR001775 GspD/PilQ family AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 659 3.0E-163 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 595 628 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 Pfam PF03958 Bacterial type II/III secretion system short domain 194 261 1.0E-12 T 11-10-2018 IPR005644 NolW-like AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 Pfam PF03958 Bacterial type II/III secretion system short domain 268 394 1.5E-12 T 11-10-2018 IPR005644 NolW-like AYJ52_06570 a26121e7b223e30d42cf0aac87e5ccfe 758 Pfam PF03958 Bacterial type II/III secretion system short domain 129 185 1.1E-7 T 11-10-2018 IPR005644 NolW-like AYJ52_12805 4190f7168d0a867925da7fa903aff39c 289 Gene3D G3DSA:1.10.3720.10 84 281 3.5E-31 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_12805 4190f7168d0a867925da7fa903aff39c 289 SUPERFAMILY SSF161098 89 274 1.44E-37 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_12805 4190f7168d0a867925da7fa903aff39c 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 284 9.3E-28 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_18305 1f08650384a7214cb6bc3f16659ad487 364 Pfam PF00487 Fatty acid desaturase 76 340 1.3E-27 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AYJ52_15325 f451a0b1c1a0da6dc7dd497555f47af8 351 PIRSF PIRSF001361 3 349 1.0E-137 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AYJ52_15325 f451a0b1c1a0da6dc7dd497555f47af8 351 Gene3D G3DSA:3.20.20.70 9 346 1.9E-135 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_15325 f451a0b1c1a0da6dc7dd497555f47af8 351 Pfam PF00793 DAHP synthetase I family 43 334 1.6E-82 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AYJ52_15325 f451a0b1c1a0da6dc7dd497555f47af8 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 15 345 2.0E-126 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AYJ52_15325 f451a0b1c1a0da6dc7dd497555f47af8 351 SUPERFAMILY SSF51569 15 343 8.14E-115 T 11-10-2018 AYJ52_09515 319c61542791e3c5eb829c9111b8db64 126 PIRSF PIRSF006246 1 124 4.3E-46 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AYJ52_09515 319c61542791e3c5eb829c9111b8db64 126 SUPERFAMILY SSF50692 1 122 1.86E-45 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AYJ52_09515 319c61542791e3c5eb829c9111b8db64 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 2.7E-45 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AYJ52_09515 319c61542791e3c5eb829c9111b8db64 126 Gene3D G3DSA:2.40.40.20 1 126 5.6E-51 T 11-10-2018 AYJ52_09515 319c61542791e3c5eb829c9111b8db64 126 Pfam PF02261 Aspartate decarboxylase 1 114 2.1E-45 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AYJ52_09515 319c61542791e3c5eb829c9111b8db64 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 4.0E-63 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AYJ52_09515 319c61542791e3c5eb829c9111b8db64 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 64.461 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AYJ52_06045 092354dc16abd1b615898d587292b11a 252 SUPERFAMILY SSF51445 43 245 1.12E-58 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AYJ52_06045 092354dc16abd1b615898d587292b11a 252 Pfam PF01183 Glycosyl hydrolases family 25 50 223 1.1E-46 T 11-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 AYJ52_06045 092354dc16abd1b615898d587292b11a 252 Gene3D G3DSA:3.20.20.80 32 246 6.1E-69 T 11-10-2018 AYJ52_06045 092354dc16abd1b615898d587292b11a 252 SMART SM00641 46 152 3.5E-13 T 11-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup AYJ52_05260 af442e96e6eca4d59e7b3102e5da4f6b 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 278 1.9E-59 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AYJ52_05260 af442e96e6eca4d59e7b3102e5da4f6b 281 PIRSF PIRSF006250 6 281 1.6E-97 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AYJ52_05260 af442e96e6eca4d59e7b3102e5da4f6b 281 SUPERFAMILY SSF54675 6 112 2.75E-30 T 11-10-2018 AYJ52_05260 af442e96e6eca4d59e7b3102e5da4f6b 281 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 16 279 1.4E-96 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AYJ52_05260 af442e96e6eca4d59e7b3102e5da4f6b 281 SUPERFAMILY SSF51690 114 279 8.63E-61 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AYJ52_05260 af442e96e6eca4d59e7b3102e5da4f6b 281 Gene3D G3DSA:3.90.1170.20 10 278 1.2E-110 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 AYJ52_05260 af442e96e6eca4d59e7b3102e5da4f6b 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 112 3.4E-24 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AYJ52_05260 af442e96e6eca4d59e7b3102e5da4f6b 281 Gene3D G3DSA:3.20.20.70 123 269 1.2E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_16020 83cc718d5385c541a7c11282a224046e 167 SMART SM00226 5 160 6.3E-40 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AYJ52_16020 83cc718d5385c541a7c11282a224046e 167 Gene3D G3DSA:3.40.50.2300 5 166 2.7E-50 T 11-10-2018 AYJ52_16020 83cc718d5385c541a7c11282a224046e 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 126 2.9E-15 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AYJ52_16020 83cc718d5385c541a7c11282a224046e 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 132 147 2.9E-15 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AYJ52_16020 83cc718d5385c541a7c11282a224046e 167 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 2.9E-15 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AYJ52_16020 83cc718d5385c541a7c11282a224046e 167 SUPERFAMILY SSF52788 3 161 3.14E-46 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AYJ52_16020 83cc718d5385c541a7c11282a224046e 167 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 157 6.5E-36 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AYJ52_01815 936e0170fb92286715e070a333bf8210 170 Pfam PF07566 Domain of Unknown Function (DUF1543) 16 70 2.0E-19 T 11-10-2018 IPR011440 Domain of unknown function DUF1543 AYJ52_01815 936e0170fb92286715e070a333bf8210 170 Gene3D G3DSA:3.10.20.10 4 56 6.4E-38 T 11-10-2018 AYJ52_01815 936e0170fb92286715e070a333bf8210 170 Gene3D G3DSA:3.50.100.10 57 156 6.4E-38 T 11-10-2018 AYJ52_01840 d8f15078bb03a914cff71d01a07ac3fa 237 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 231 1.4E-30 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AYJ52_01840 d8f15078bb03a914cff71d01a07ac3fa 237 Gene3D G3DSA:3.20.20.190 2 228 2.9E-53 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AYJ52_01840 d8f15078bb03a914cff71d01a07ac3fa 237 SUPERFAMILY SSF51695 1 236 9.42E-51 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AYJ52_07500 650329ab504e373f5e77d2c418a2aabb 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 2.7E-28 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AYJ52_07500 650329ab504e373f5e77d2c418a2aabb 134 Gene3D G3DSA:3.30.420.270 61 130 9.6E-13 T 11-10-2018 AYJ52_06350 f2ea7f891ce9c174e942e93e512177a9 219 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 3.5E-65 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_06350 f2ea7f891ce9c174e942e93e512177a9 219 PIRSF PIRSF000498 1 212 4.2E-78 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_06350 f2ea7f891ce9c174e942e93e512177a9 219 SUPERFAMILY SSF63380 1 88 4.34E-27 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_06350 f2ea7f891ce9c174e942e93e512177a9 219 Pfam PF00677 Lumazine binding domain 99 183 1.7E-24 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_06350 f2ea7f891ce9c174e942e93e512177a9 219 Pfam PF00677 Lumazine binding domain 3 86 1.1E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_06350 f2ea7f891ce9c174e942e93e512177a9 219 SUPERFAMILY SSF63380 92 193 3.83E-32 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_06350 f2ea7f891ce9c174e942e93e512177a9 219 Gene3D G3DSA:2.40.30.20 1 88 5.3E-27 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_06350 f2ea7f891ce9c174e942e93e512177a9 219 Gene3D G3DSA:2.40.30.20 101 205 1.0E-34 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_16460 62326d82bae81941bcaa40e77bdd4149 234 SUPERFAMILY SSF55120 61 225 2.4E-37 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_16460 62326d82bae81941bcaa40e77bdd4149 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 223 1.0E-39 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AYJ52_16460 62326d82bae81941bcaa40e77bdd4149 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AYJ52_16460 62326d82bae81941bcaa40e77bdd4149 234 Gene3D G3DSA:3.30.70.580 62 225 2.6E-49 T 11-10-2018 AYJ52_16460 62326d82bae81941bcaa40e77bdd4149 234 Pfam PF00849 RNA pseudouridylate synthase 62 193 8.8E-14 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_16460 62326d82bae81941bcaa40e77bdd4149 234 SUPERFAMILY SSF55174 3 78 1.62E-8 T 11-10-2018 AYJ52_16460 62326d82bae81941bcaa40e77bdd4149 234 Gene3D G3DSA:3.10.290.10 2 59 5.6E-9 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AYJ52_16460 62326d82bae81941bcaa40e77bdd4149 234 Pfam PF01479 S4 domain 3 43 1.0E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_16460 62326d82bae81941bcaa40e77bdd4149 234 SMART SM00363 1 64 1.1E-4 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_16460 62326d82bae81941bcaa40e77bdd4149 234 Gene3D G3DSA:3.30.70.1560 129 210 2.6E-49 T 11-10-2018 AYJ52_14930 d9ccc83c57f7d28e5883c4fddfe7d060 138 Gene3D G3DSA:1.10.1660.10 1 133 3.3E-29 T 11-10-2018 AYJ52_14930 d9ccc83c57f7d28e5883c4fddfe7d060 138 SUPERFAMILY SSF46955 1 109 4.4E-27 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_14930 d9ccc83c57f7d28e5883c4fddfe7d060 138 SMART SM00422 1 70 4.8E-28 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_14930 d9ccc83c57f7d28e5883c4fddfe7d060 138 Pfam PF13411 MerR HTH family regulatory protein 1 69 1.2E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_14930 d9ccc83c57f7d28e5883c4fddfe7d060 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.3E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_14930 d9ccc83c57f7d28e5883c4fddfe7d060 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.3E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_14930 d9ccc83c57f7d28e5883c4fddfe7d060 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.3E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_01080 a7b4aceed7d97ad3ef90b0265141f93e 507 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 227 6.1E-74 T 11-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein AYJ52_01080 a7b4aceed7d97ad3ef90b0265141f93e 507 Gene3D G3DSA:1.10.10.1710 443 507 5.6E-23 T 11-10-2018 AYJ52_01080 a7b4aceed7d97ad3ef90b0265141f93e 507 Gene3D G3DSA:3.40.50.620 5 229 1.4E-120 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_01080 a7b4aceed7d97ad3ef90b0265141f93e 507 Gene3D G3DSA:1.25.40.80 132 318 1.4E-120 T 11-10-2018 AYJ52_01080 a7b4aceed7d97ad3ef90b0265141f93e 507 SUPERFAMILY SSF48173 230 491 2.88E-63 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AYJ52_01080 a7b4aceed7d97ad3ef90b0265141f93e 507 Gene3D G3DSA:1.10.579.10 322 442 3.9E-54 T 11-10-2018 AYJ52_07090 a09b464489c6f41b02c24eb8939cdd56 279 SMART SM00116 67 117 0.41 T 11-10-2018 IPR000644 CBS domain AYJ52_07090 a09b464489c6f41b02c24eb8939cdd56 279 SMART SM00116 131 179 19.0 T 11-10-2018 IPR000644 CBS domain AYJ52_07090 a09b464489c6f41b02c24eb8939cdd56 279 SUPERFAMILY SSF56176 206 278 3.27E-14 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AYJ52_07090 a09b464489c6f41b02c24eb8939cdd56 279 SUPERFAMILY SSF54631 55 191 5.49E-32 T 11-10-2018 AYJ52_07090 a09b464489c6f41b02c24eb8939cdd56 279 SMART SM01091 201 279 5.9E-12 T 11-10-2018 IPR005170 Transporter-associated domain AYJ52_07090 a09b464489c6f41b02c24eb8939cdd56 279 Pfam PF03471 Transporter associated domain 206 278 5.5E-15 T 11-10-2018 IPR005170 Transporter-associated domain AYJ52_07090 a09b464489c6f41b02c24eb8939cdd56 279 Gene3D G3DSA:3.10.580.10 38 190 2.0E-51 T 11-10-2018 AYJ52_07090 a09b464489c6f41b02c24eb8939cdd56 279 Gene3D G3DSA:3.30.465.10 201 278 7.7E-19 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AYJ52_07090 a09b464489c6f41b02c24eb8939cdd56 279 Pfam PF00571 CBS domain 59 116 4.1E-5 T 11-10-2018 IPR000644 CBS domain AYJ52_07090 a09b464489c6f41b02c24eb8939cdd56 279 Pfam PF00571 CBS domain 126 179 6.9E-7 T 11-10-2018 IPR000644 CBS domain AYJ52_10255 a4116560b9b45d3a7ace8e6e64253843 381 SUPERFAMILY SSF74650 26 377 3.01E-110 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AYJ52_10255 a4116560b9b45d3a7ace8e6e64253843 381 PIRSF PIRSF005096 19 380 3.5E-129 T 11-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AYJ52_10255 a4116560b9b45d3a7ace8e6e64253843 381 Pfam PF01263 Aldose 1-epimerase 38 376 3.3E-94 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AYJ52_10255 a4116560b9b45d3a7ace8e6e64253843 381 Gene3D G3DSA:2.70.98.10 28 379 8.5E-123 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AYJ52_10255 a4116560b9b45d3a7ace8e6e64253843 381 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 201 210 - T 11-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AYJ52_17460 8e626dac73b93ff5bc107cc4cc4115af 237 SUPERFAMILY SSF161098 17 220 7.46E-35 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_17460 8e626dac73b93ff5bc107cc4cc4115af 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 228 1.0E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_17460 8e626dac73b93ff5bc107cc4cc4115af 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 2.4E-15 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AYJ52_17460 8e626dac73b93ff5bc107cc4cc4115af 237 Gene3D G3DSA:1.10.3720.10 8 229 1.3E-44 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_04875 fc0c5c1a66206aeb49043d73bdc8a8f9 335 Gene3D G3DSA:3.40.190.170 53 247 6.6E-10 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AYJ52_04875 fc0c5c1a66206aeb49043d73bdc8a8f9 335 SUPERFAMILY SSF53850 126 220 4.48E-5 T 11-10-2018 AYJ52_09590 ba9da34d49ec6e9f0e70883224ed3bb1 245 SUPERFAMILY SSF64438 28 244 5.13E-67 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AYJ52_09590 ba9da34d49ec6e9f0e70883224ed3bb1 245 Gene3D G3DSA:3.60.140.10 22 245 2.8E-68 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AYJ52_09590 ba9da34d49ec6e9f0e70883224ed3bb1 245 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 28 245 1.7E-50 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AYJ52_09590 ba9da34d49ec6e9f0e70883224ed3bb1 245 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 30 243 5.3E-61 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AYJ52_08120 5cdf2587bdb67bb883a98b75869b5f05 465 SUPERFAMILY SSF53335 35 402 7.06E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_08120 5cdf2587bdb67bb883a98b75869b5f05 465 Pfam PF01555 DNA methylase 61 379 1.3E-40 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AYJ52_08120 5cdf2587bdb67bb883a98b75869b5f05 465 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 339 353 1.3E-16 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AYJ52_08120 5cdf2587bdb67bb883a98b75869b5f05 465 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 61 73 1.3E-16 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AYJ52_08120 5cdf2587bdb67bb883a98b75869b5f05 465 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 316 338 1.3E-16 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AYJ52_08120 5cdf2587bdb67bb883a98b75869b5f05 465 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 116 135 1.3E-16 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AYJ52_08120 5cdf2587bdb67bb883a98b75869b5f05 465 PIRSF PIRSF015855 3 456 1.7E-97 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AYJ52_08120 5cdf2587bdb67bb883a98b75869b5f05 465 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 64 70 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AYJ52_16350 fc31289402c9cee02998dba9399f54d7 570 Pfam PF05970 PIF1-like helicase 11 185 3.2E-37 T 11-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 AYJ52_16350 fc31289402c9cee02998dba9399f54d7 570 Pfam PF05970 PIF1-like helicase 204 297 3.6E-7 T 11-10-2018 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 AYJ52_16350 fc31289402c9cee02998dba9399f54d7 570 SMART SM00382 12 168 7.0E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_16350 fc31289402c9cee02998dba9399f54d7 570 Gene3D G3DSA:3.40.50.300 183 399 6.4E-7 T 11-10-2018 AYJ52_16350 fc31289402c9cee02998dba9399f54d7 570 SUPERFAMILY SSF52540 3 178 1.03E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16350 fc31289402c9cee02998dba9399f54d7 570 Gene3D G3DSA:3.40.50.300 1 175 2.4E-32 T 11-10-2018 AYJ52_16350 fc31289402c9cee02998dba9399f54d7 570 SUPERFAMILY SSF52540 125 411 9.03E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16350 fc31289402c9cee02998dba9399f54d7 570 Pfam PF14493 Helix-turn-helix domain 466 566 2.5E-18 T 11-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AYJ52_02950 266d273ccd9830b205916350bc98fc7a 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 446 5.1E-246 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AYJ52_02950 266d273ccd9830b205916350bc98fc7a 447 Pfam PF04996 Succinylarginine dihydrolase 3 446 7.0E-221 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AYJ52_02950 266d273ccd9830b205916350bc98fc7a 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 447 59.313 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AYJ52_02950 266d273ccd9830b205916350bc98fc7a 447 SUPERFAMILY SSF55909 3 447 2.65E-207 T 11-10-2018 AYJ52_02950 266d273ccd9830b205916350bc98fc7a 447 Gene3D G3DSA:3.75.10.20 1 447 7.4E-208 T 11-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AYJ52_13755 2341d13c119dc1a3c991ed209044aa77 403 Pfam PF00487 Fatty acid desaturase 130 339 3.0E-28 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 SUPERFAMILY SSF51735 164 449 3.94E-86 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 SUPERFAMILY SSF53223 11 162 3.09E-52 T 11-10-2018 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 Gene3D G3DSA:3.40.50.10950 442 748 8.5E-94 T 11-10-2018 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 SMART SM00919 164 397 2.3E-126 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 SMART SM01274 19 152 2.7E-80 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 Pfam PF03949 Malic enzyme, NAD binding domain 166 357 2.3E-22 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 Gene3D G3DSA:3.40.50.720 162 441 7.6E-82 T 11-10-2018 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 PIRSF PIRSF036684 1 756 0.0 T 11-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 Gene3D G3DSA:3.40.50.10750 569 724 8.5E-94 T 11-10-2018 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 Gene3D G3DSA:3.40.50.10380 1 161 6.4E-70 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 Pfam PF01515 Phosphate acetyl/butaryl transferase 426 748 5.8E-95 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 Pfam PF00390 Malic enzyme, N-terminal domain 21 113 4.3E-20 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 Pfam PF00390 Malic enzyme, N-terminal domain 115 152 2.4E-6 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AYJ52_17655 c4e33f5c2f8b1e3335cc7c2a0ce368be 756 SUPERFAMILY SSF53659 426 751 2.22E-89 T 11-10-2018 AYJ52_13780 b11a7bdf0773a5722b0432a4696f606f 155 SUPERFAMILY SSF55826 2 152 2.09E-46 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AYJ52_13780 b11a7bdf0773a5722b0432a4696f606f 155 Gene3D G3DSA:3.90.960.10 1 154 1.9E-60 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AYJ52_13780 b11a7bdf0773a5722b0432a4696f606f 155 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 152 7.7E-59 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AYJ52_13780 b11a7bdf0773a5722b0432a4696f606f 155 Pfam PF04073 Aminoacyl-tRNA editing domain 32 143 7.8E-28 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AYJ52_13780 b11a7bdf0773a5722b0432a4696f606f 155 PIRSF PIRSF006181 1 155 4.7E-59 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AYJ52_16675 b4740c005e78f431137db0ceacc98edd 607 Pfam PF01522 Polysaccharide deacetylase 92 256 3.1E-24 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AYJ52_16675 b4740c005e78f431137db0ceacc98edd 607 SUPERFAMILY SSF88713 56 258 4.08E-32 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AYJ52_16675 b4740c005e78f431137db0ceacc98edd 607 Gene3D G3DSA:3.20.20.80 300 424 4.4E-20 T 11-10-2018 AYJ52_16675 b4740c005e78f431137db0ceacc98edd 607 Gene3D G3DSA:3.20.20.370 26 289 4.4E-62 T 11-10-2018 AYJ52_16675 b4740c005e78f431137db0ceacc98edd 607 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 313 390 1.1E-12 T 11-10-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal AYJ52_16675 b4740c005e78f431137db0ceacc98edd 607 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 38 396 6.4E-105 T 11-10-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0043708 AYJ52_04450 05d5148eb34bf5415a63ccb6108fce6e 149 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 10 141 20.96 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AYJ52_04450 05d5148eb34bf5415a63ccb6108fce6e 149 Gene3D G3DSA:1.10.940.10 6 145 1.7E-44 T 11-10-2018 IPR035926 NusB-like superfamily AYJ52_04450 05d5148eb34bf5415a63ccb6108fce6e 149 Pfam PF01029 NusB family 13 136 7.7E-29 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AYJ52_04450 05d5148eb34bf5415a63ccb6108fce6e 149 SUPERFAMILY SSF48013 10 141 5.49E-37 T 11-10-2018 IPR035926 NusB-like superfamily AYJ52_04450 05d5148eb34bf5415a63ccb6108fce6e 149 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 12 138 8.4E-39 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AYJ52_07935 14f4330d02dd4413f44174196c67fb14 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 3.0E-132 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AYJ52_07935 14f4330d02dd4413f44174196c67fb14 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 6.8E-76 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AYJ52_07935 14f4330d02dd4413f44174196c67fb14 338 Gene3D G3DSA:3.40.50.720 1 181 1.0E-79 T 11-10-2018 AYJ52_07935 14f4330d02dd4413f44174196c67fb14 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 5.6E-59 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AYJ52_07935 14f4330d02dd4413f44174196c67fb14 338 PIRSF PIRSF000116 201 333 3.0E-13 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AYJ52_07935 14f4330d02dd4413f44174196c67fb14 338 PIRSF PIRSF000116 2 203 5.0E-53 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AYJ52_07935 14f4330d02dd4413f44174196c67fb14 338 Gene3D G3DSA:1.10.3730.40 182 338 9.0E-71 T 11-10-2018 AYJ52_07935 14f4330d02dd4413f44174196c67fb14 338 SUPERFAMILY SSF48179 183 332 7.99E-65 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_07935 14f4330d02dd4413f44174196c67fb14 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.544 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AYJ52_07935 14f4330d02dd4413f44174196c67fb14 338 SUPERFAMILY SSF51735 1 182 2.55E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_03000 a9a9444fead1812fe37d9360d4a7c4f6 155 Pfam PF10107 Endonuclease related to archaeal Holliday junction resolvase 35 150 3.9E-26 T 11-10-2018 IPR019287 Holliday junction resolvase-related domain AYJ52_15045 d48b3a26dfadf32d8b67d8a46545174f 317 Gene3D G3DSA:1.10.10.10 183 316 2.8E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15045 d48b3a26dfadf32d8b67d8a46545174f 317 Gene3D G3DSA:2.30.110.10 10 182 5.1E-53 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AYJ52_15045 d48b3a26dfadf32d8b67d8a46545174f 317 Pfam PF01613 Flavin reductase like domain 22 162 1.4E-35 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AYJ52_15045 d48b3a26dfadf32d8b67d8a46545174f 317 SUPERFAMILY SSF46785 180 314 2.62E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_15045 d48b3a26dfadf32d8b67d8a46545174f 317 SMART SM00903 21 164 6.5E-60 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AYJ52_15045 d48b3a26dfadf32d8b67d8a46545174f 317 SUPERFAMILY SSF50475 8 167 5.4E-50 T 11-10-2018 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 Gene3D G3DSA:3.40.50.300 110 275 4.3E-112 T 11-10-2018 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 Gene3D G3DSA:3.30.70.3280 390 529 2.6E-52 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.9E-7 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.266 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 3.8E-49 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.7E-46 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 Gene3D G3DSA:3.40.50.300 72 379 4.3E-112 T 11-10-2018 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 SUPERFAMILY SSF52540 10 277 3.67E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 163 4.7E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 SUPERFAMILY SSF54980 393 468 1.4E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 SUPERFAMILY SSF50447 262 393 3.06E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 6.6E-257 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 2.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_08165 cc78799ccf97255ee2150526ec26d7d2 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 2.0E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_00435 68d2f5c482688f1c7b5b3ec753a3b3c0 336 SUPERFAMILY SSF53098 175 321 8.35E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_00435 68d2f5c482688f1c7b5b3ec753a3b3c0 336 Gene3D G3DSA:3.30.420.10 167 328 1.7E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_00435 68d2f5c482688f1c7b5b3ec753a3b3c0 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_00435 68d2f5c482688f1c7b5b3ec753a3b3c0 336 Pfam PF00665 Integrase core domain 175 280 1.9E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_13805 fac30b5c3f3804cba599ecba3e538fe6 351 SUPERFAMILY SSF52733 2 346 1.7E-110 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AYJ52_13805 fac30b5c3f3804cba599ecba3e538fe6 351 Pfam PF02277 Phosphoribosyltransferase 8 345 2.9E-124 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AYJ52_13805 fac30b5c3f3804cba599ecba3e538fe6 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 10 347 33.736 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AYJ52_13805 fac30b5c3f3804cba599ecba3e538fe6 351 Gene3D G3DSA:1.10.1610.10 22 345 3.0E-121 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AYJ52_13805 fac30b5c3f3804cba599ecba3e538fe6 351 Gene3D G3DSA:3.40.50.10210 54 328 3.0E-121 T 11-10-2018 AYJ52_13805 fac30b5c3f3804cba599ecba3e538fe6 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 12 345 4.9E-125 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AYJ52_04970 75698a6b73cb73cd2d483a6cb1f7bf66 441 Gene3D G3DSA:3.20.20.140 76 393 5.8E-200 T 11-10-2018 AYJ52_04970 75698a6b73cb73cd2d483a6cb1f7bf66 441 SUPERFAMILY SSF51556 75 378 1.88E-104 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_04970 75698a6b73cb73cd2d483a6cb1f7bf66 441 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 431 1.4E-192 T 11-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 AYJ52_04970 75698a6b73cb73cd2d483a6cb1f7bf66 441 SUPERFAMILY SSF51338 32 90 9.56E-8 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_04970 75698a6b73cb73cd2d483a6cb1f7bf66 441 Pfam PF01979 Amidohydrolase family 73 432 1.5E-74 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AYJ52_04970 75698a6b73cb73cd2d483a6cb1f7bf66 441 Gene3D G3DSA:2.30.40.10 10 429 5.8E-200 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_13925 922449522b4ee8ca32c5a49204b067af 223 Gene3D G3DSA:3.40.50.360 1 218 1.8E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_13925 922449522b4ee8ca32c5a49204b067af 223 SUPERFAMILY SSF52218 1 218 3.06E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_13925 922449522b4ee8ca32c5a49204b067af 223 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 219 24.309 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AYJ52_13925 922449522b4ee8ca32c5a49204b067af 223 Pfam PF02525 Flavodoxin-like fold 3 213 1.1E-35 T 11-10-2018 IPR003680 Flavodoxin-like fold AYJ52_02965 7a621520d9fb5f2f85ec8c0ecd508df6 404 SUPERFAMILY SSF53383 15 401 3.99E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_02965 7a621520d9fb5f2f85ec8c0ecd508df6 404 Gene3D G3DSA:3.40.640.10 59 304 2.7E-151 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_02965 7a621520d9fb5f2f85ec8c0ecd508df6 404 Gene3D G3DSA:3.90.1150.10 25 392 2.7E-151 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_02965 7a621520d9fb5f2f85ec8c0ecd508df6 404 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 399 1.8E-152 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AYJ52_02965 7a621520d9fb5f2f85ec8c0ecd508df6 404 PIRSF PIRSF000521 161 402 6.5E-38 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_02965 7a621520d9fb5f2f85ec8c0ecd508df6 404 PIRSF PIRSF000521 28 160 4.5E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_02965 7a621520d9fb5f2f85ec8c0ecd508df6 404 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.357 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AYJ52_02965 7a621520d9fb5f2f85ec8c0ecd508df6 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_02965 7a621520d9fb5f2f85ec8c0ecd508df6 404 Pfam PF00202 Aminotransferase class-III 25 399 1.0E-120 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_02965 7a621520d9fb5f2f85ec8c0ecd508df6 404 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 3.7E-219 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AYJ52_07510 105c154946753383925f4e4abf36a6c6 351 Pfam PF13387 Domain of unknown function (DUF4105) 137 289 1.2E-44 T 11-10-2018 IPR025178 Domain of unknown function DUF4105 AYJ52_01740 362a9193abcf3d16d7736eff6f32b1ca 385 Gene3D G3DSA:3.40.50.150 112 252 3.8E-10 T 11-10-2018 AYJ52_01740 362a9193abcf3d16d7736eff6f32b1ca 385 Pfam PF13679 Methyltransferase domain 142 277 1.5E-32 T 11-10-2018 IPR025714 Methyltransferase domain AYJ52_01740 362a9193abcf3d16d7736eff6f32b1ca 385 SUPERFAMILY SSF53335 152 293 8.14E-15 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 307 330 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 1.3E-31 T 11-10-2018 AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 1.3E-31 T 11-10-2018 AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 157 179 1.3E-31 T 11-10-2018 AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 1.3E-31 T 11-10-2018 AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 1.3E-31 T 11-10-2018 AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 PRINTS PR00173 Glutamate-aspartate symporter signature 339 358 1.3E-31 T 11-10-2018 AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 Gene3D G3DSA:1.10.3860.10 8 429 1.1E-118 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 Pfam PF00375 Sodium:dicarboxylate symporter family 21 413 2.4E-106 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 14 432 36.33 T 11-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 SUPERFAMILY SSF118215 21 414 1.96E-115 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_16840 1735ef488f53e286b7a79a8787e1ff8d 432 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 48 63 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AYJ52_01195 62eb299ac19a478ccae8802ec8a155ff 332 SUPERFAMILY SSF51735 117 293 1.13E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_01195 62eb299ac19a478ccae8802ec8a155ff 332 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 7 330 2.7E-147 T 11-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AYJ52_01195 62eb299ac19a478ccae8802ec8a155ff 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 105 1.9E-11 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AYJ52_01195 62eb299ac19a478ccae8802ec8a155ff 332 SMART SM00829 16 328 2.4E-61 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AYJ52_01195 62eb299ac19a478ccae8802ec8a155ff 332 Gene3D G3DSA:3.40.50.720 126 267 1.8E-111 T 11-10-2018 AYJ52_01195 62eb299ac19a478ccae8802ec8a155ff 332 Pfam PF00107 Zinc-binding dehydrogenase 157 274 2.9E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AYJ52_01195 62eb299ac19a478ccae8802ec8a155ff 332 SUPERFAMILY SSF50129 7 146 7.08E-44 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_01195 62eb299ac19a478ccae8802ec8a155ff 332 Gene3D G3DSA:3.90.180.10 19 328 1.8E-111 T 11-10-2018 AYJ52_15350 5e1f5ceae4107291cd1be608c4366f22 349 SMART SM00859 3 141 1.6E-61 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AYJ52_15350 5e1f5ceae4107291cd1be608c4366f22 349 Gene3D G3DSA:3.30.360.10 147 317 3.7E-128 T 11-10-2018 AYJ52_15350 5e1f5ceae4107291cd1be608c4366f22 349 SUPERFAMILY SSF55347 149 317 5.01E-46 T 11-10-2018 AYJ52_15350 5e1f5ceae4107291cd1be608c4366f22 349 SUPERFAMILY SSF51735 2 164 3.74E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_15350 5e1f5ceae4107291cd1be608c4366f22 349 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AYJ52_15350 5e1f5ceae4107291cd1be608c4366f22 349 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 166 320 1.7E-17 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AYJ52_15350 5e1f5ceae4107291cd1be608c4366f22 349 Gene3D G3DSA:3.40.50.720 4 335 3.7E-128 T 11-10-2018 AYJ52_15350 5e1f5ceae4107291cd1be608c4366f22 349 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 343 42.67 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AYJ52_15350 5e1f5ceae4107291cd1be608c4366f22 349 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 141 3.1E-39 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AYJ52_15350 5e1f5ceae4107291cd1be608c4366f22 349 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 349 4.2E-129 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AYJ52_17200 de6050d0e5e8d64e661ab6f3662cfe8c 195 Pfam PF02674 Colicin V production protein 4 142 4.2E-27 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AYJ52_02235 c587568d3f6901a3a62e7d8fa0f8a0ec 142 PIRSF PIRSF002181 1 142 2.0E-49 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AYJ52_02235 c587568d3f6901a3a62e7d8fa0f8a0ec 142 SUPERFAMILY SSF52161 1 140 3.66E-58 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_02235 c587568d3f6901a3a62e7d8fa0f8a0ec 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.566 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AYJ52_02235 c587568d3f6901a3a62e7d8fa0f8a0ec 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 7.7E-64 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02235 c587568d3f6901a3a62e7d8fa0f8a0ec 142 Gene3D G3DSA:3.90.1180.10 1 142 1.1E-61 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_02235 c587568d3f6901a3a62e7d8fa0f8a0ec 142 Pfam PF00572 Ribosomal protein L13 15 138 5.8E-56 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AYJ52_06380 f8f62bdcc90bebaf1563ea35978429ac 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 354 2.1E-64 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AYJ52_06380 f8f62bdcc90bebaf1563ea35978429ac 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 354 4.9E-105 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AYJ52_02080 66aeb67cf93c867309bb979bda5468b7 624 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 566 4.1E-61 T 11-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AYJ52_02080 66aeb67cf93c867309bb979bda5468b7 624 Gene3D G3DSA:3.30.9.10 345 549 1.1E-78 T 11-10-2018 AYJ52_02080 66aeb67cf93c867309bb979bda5468b7 624 Pfam PF01266 FAD dependent oxidoreductase 267 587 1.2E-26 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AYJ52_02080 66aeb67cf93c867309bb979bda5468b7 624 Gene3D G3DSA:3.50.50.60 268 611 1.1E-78 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_02080 66aeb67cf93c867309bb979bda5468b7 624 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 8 613 21.743 T 11-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AYJ52_02080 66aeb67cf93c867309bb979bda5468b7 624 Gene3D G3DSA:3.40.50.150 13 252 8.3E-87 T 11-10-2018 AYJ52_02080 66aeb67cf93c867309bb979bda5468b7 624 SUPERFAMILY SSF51905 265 526 6.21E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_02080 66aeb67cf93c867309bb979bda5468b7 624 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 120 242 5.2E-37 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 AYJ52_02225 7822a71d171c38fa9ed8933089a3aa9d 270 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 46 73 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AYJ52_02225 7822a71d171c38fa9ed8933089a3aa9d 270 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 14 269 57.975 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AYJ52_02225 7822a71d171c38fa9ed8933089a3aa9d 270 SMART SM00650 30 202 3.4E-82 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AYJ52_02225 7822a71d171c38fa9ed8933089a3aa9d 270 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 15 267 3.1E-86 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AYJ52_02225 7822a71d171c38fa9ed8933089a3aa9d 270 Pfam PF00398 Ribosomal RNA adenine dimethylase 14 266 3.9E-66 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AYJ52_02225 7822a71d171c38fa9ed8933089a3aa9d 270 SUPERFAMILY SSF53335 10 268 5.1E-77 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_02225 7822a71d171c38fa9ed8933089a3aa9d 270 Gene3D G3DSA:3.40.50.150 8 203 4.6E-68 T 11-10-2018 AYJ52_02225 7822a71d171c38fa9ed8933089a3aa9d 270 Gene3D G3DSA:1.10.8.100 205 270 2.4E-22 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AYJ52_15560 b4d693c1462552576a763e610c2002ac 147 Pfam PF00582 Universal stress protein family 3 145 4.7E-30 T 11-10-2018 IPR006016 UspA AYJ52_15560 b4d693c1462552576a763e610c2002ac 147 SUPERFAMILY SSF52402 1 145 1.09E-39 T 11-10-2018 AYJ52_15560 b4d693c1462552576a763e610c2002ac 147 PIRSF PIRSF006276 1 147 4.1E-20 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_15560 b4d693c1462552576a763e610c2002ac 147 Gene3D G3DSA:3.40.50.620 1 146 1.0E-40 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_15560 b4d693c1462552576a763e610c2002ac 147 PRINTS PR01438 Universal stress protein signature 124 146 4.5E-17 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_15560 b4d693c1462552576a763e610c2002ac 147 PRINTS PR01438 Universal stress protein signature 106 118 4.5E-17 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_15560 b4d693c1462552576a763e610c2002ac 147 PRINTS PR01438 Universal stress protein signature 3 21 4.5E-17 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_01555 a3761d4969eeeffef0e4cb56b09b48bf 186 SMART SM00903 36 181 7.5E-46 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AYJ52_01555 a3761d4969eeeffef0e4cb56b09b48bf 186 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 27 182 1.6E-83 T 11-10-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 AYJ52_01555 a3761d4969eeeffef0e4cb56b09b48bf 186 SUPERFAMILY SSF50475 32 182 5.89E-42 T 11-10-2018 AYJ52_01555 a3761d4969eeeffef0e4cb56b09b48bf 186 Pfam PF01613 Flavin reductase like domain 36 182 1.6E-30 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AYJ52_01555 a3761d4969eeeffef0e4cb56b09b48bf 186 Gene3D G3DSA:2.30.110.10 12 185 1.1E-42 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AYJ52_01555 a3761d4969eeeffef0e4cb56b09b48bf 186 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 24 186 40.508 T 11-10-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 AYJ52_12595 b1009caa52afc60349637d4196cc7997 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 265 4.4E-51 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_12595 b1009caa52afc60349637d4196cc7997 286 SMART SM00062 49 271 4.1E-70 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_12595 b1009caa52afc60349637d4196cc7997 286 Gene3D G3DSA:3.40.190.10 44 264 5.8E-76 T 11-10-2018 AYJ52_12595 b1009caa52afc60349637d4196cc7997 286 SUPERFAMILY SSF53850 9 265 3.17E-60 T 11-10-2018 AYJ52_12595 b1009caa52afc60349637d4196cc7997 286 Gene3D G3DSA:3.40.190.10 139 229 5.8E-76 T 11-10-2018 AYJ52_16900 031dbef38102510b9e9c18c3c18f9f8a 449 Pfam PF07690 Major Facilitator Superfamily 34 374 8.8E-47 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_16900 031dbef38102510b9e9c18c3c18f9f8a 449 Gene3D G3DSA:1.20.1250.20 221 422 4.0E-29 T 11-10-2018 AYJ52_16900 031dbef38102510b9e9c18c3c18f9f8a 449 Gene3D G3DSA:1.20.1250.20 19 209 7.7E-36 T 11-10-2018 AYJ52_16900 031dbef38102510b9e9c18c3c18f9f8a 449 SUPERFAMILY SSF103473 17 418 1.96E-77 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_10220 225a1ff384b50068e943b8f4438ddb08 546 SUPERFAMILY SSF52467 159 348 3.62E-33 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AYJ52_10220 225a1ff384b50068e943b8f4438ddb08 546 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AYJ52_10220 225a1ff384b50068e943b8f4438ddb08 546 SUPERFAMILY SSF52518 362 531 1.34E-44 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_10220 225a1ff384b50068e943b8f4438ddb08 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 323 1.5E-25 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AYJ52_10220 225a1ff384b50068e943b8f4438ddb08 546 SUPERFAMILY SSF52518 2 178 4.71E-40 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_10220 225a1ff384b50068e943b8f4438ddb08 546 Gene3D G3DSA:3.40.50.1220 186 351 1.7E-32 T 11-10-2018 AYJ52_10220 225a1ff384b50068e943b8f4438ddb08 546 Gene3D G3DSA:3.40.50.970 1 179 4.6E-44 T 11-10-2018 AYJ52_10220 225a1ff384b50068e943b8f4438ddb08 546 Gene3D G3DSA:3.40.50.970 352 535 1.2E-45 T 11-10-2018 AYJ52_10220 225a1ff384b50068e943b8f4438ddb08 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 526 1.9E-30 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AYJ52_10220 225a1ff384b50068e943b8f4438ddb08 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 175 5.8E-44 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AYJ52_19210 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Gene3D G3DSA:3.20.20.70 2 212 9.6E-64 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_19210 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 SUPERFAMILY SSF51366 4 209 3.92E-56 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AYJ52_19210 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 2.3E-44 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AYJ52_19210 c359b7858f5a43fa0cb6fe7cb3bcd67b 212 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 212 37.199 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AYJ52_15890 a740f18a42d412cd1ed0a064de8a24c8 196 SMART SM01012 128 183 6.8E-20 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 AYJ52_15890 a740f18a42d412cd1ed0a064de8a24c8 196 Pfam PF00072 Response regulator receiver domain 6 112 3.3E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_15890 a740f18a42d412cd1ed0a064de8a24c8 196 Gene3D G3DSA:3.40.50.2300 1 129 1.2E-13 T 11-10-2018 AYJ52_15890 a740f18a42d412cd1ed0a064de8a24c8 196 SUPERFAMILY SSF52172 1 183 6.4E-42 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_15890 a740f18a42d412cd1ed0a064de8a24c8 196 Pfam PF03861 ANTAR domain 131 183 2.9E-16 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 AYJ52_15890 a740f18a42d412cd1ed0a064de8a24c8 196 SMART SM00448 4 112 0.0033 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_15890 a740f18a42d412cd1ed0a064de8a24c8 196 PIRSF PIRSF036382 1 190 2.6E-49 T 11-10-2018 IPR008327 Signal transduction response regulator, antiterminator AYJ52_15890 a740f18a42d412cd1ed0a064de8a24c8 196 Gene3D G3DSA:1.10.10.10 131 190 1.5E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14385 64f3a5c3f98ef91056cc6bb090bd240c 369 Gene3D G3DSA:3.40.50.720 174 312 8.3E-150 T 11-10-2018 AYJ52_14385 64f3a5c3f98ef91056cc6bb090bd240c 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.1E-25 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AYJ52_14385 64f3a5c3f98ef91056cc6bb090bd240c 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 3.8E-222 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AYJ52_14385 64f3a5c3f98ef91056cc6bb090bd240c 369 SUPERFAMILY SSF51735 161 333 3.06E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14385 64f3a5c3f98ef91056cc6bb090bd240c 369 SUPERFAMILY SSF50129 1 184 1.67E-70 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_14385 64f3a5c3f98ef91056cc6bb090bd240c 369 Gene3D G3DSA:3.90.180.10 6 364 8.3E-150 T 11-10-2018 AYJ52_14385 64f3a5c3f98ef91056cc6bb090bd240c 369 SUPERFAMILY SSF50129 318 369 1.08E-11 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_14385 64f3a5c3f98ef91056cc6bb090bd240c 369 SMART SM00829 12 367 1.0E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AYJ52_14385 64f3a5c3f98ef91056cc6bb090bd240c 369 Pfam PF00107 Zinc-binding dehydrogenase 197 330 5.3E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AYJ52_14385 64f3a5c3f98ef91056cc6bb090bd240c 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AYJ52_02100 7ff0d8155f5a21f8e3f7c96c342170e1 168 Gene3D G3DSA:3.10.450.50 43 168 4.0E-40 T 11-10-2018 AYJ52_02100 7ff0d8155f5a21f8e3f7c96c342170e1 168 Pfam PF07366 SnoaL-like polyketide cyclase 52 157 1.1E-11 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 AYJ52_02100 7ff0d8155f5a21f8e3f7c96c342170e1 168 SUPERFAMILY SSF54427 46 158 3.99E-24 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 SUPERFAMILY SSF48557 4 447 3.46E-104 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 Gene3D G3DSA:1.10.275.10 1 115 5.2E-47 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 Pfam PF08328 Adenylosuccinate lyase C-terminal 328 445 6.2E-46 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 Gene3D G3DSA:1.20.200.10 116 446 2.8E-148 T 11-10-2018 AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 Pfam PF00206 Lyase 12 309 3.9E-65 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 ProSitePatterns PS00163 Fumarate lyases signature. 291 300 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 PRINTS PR00149 Fumarate lyase superfamily signature 160 178 1.8E-17 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 1.8E-17 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 PRINTS PR00149 Fumarate lyase superfamily signature 248 275 1.8E-17 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 PRINTS PR00149 Fumarate lyase superfamily signature 291 307 1.8E-17 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 Gene3D G3DSA:1.10.40.30 379 445 2.8E-148 T 11-10-2018 AYJ52_18220 a925ef80e349bf9cf2e47bd64b6fff44 462 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 10 454 1.3E-130 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_07095 765e4324a282f6cfc4106b276e9c78cc 85 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 11-10-2018 IPR001455 TusA-like domain AYJ52_07095 765e4324a282f6cfc4106b276e9c78cc 85 Pfam PF01206 Sulfurtransferase TusA 11 84 2.1E-21 T 11-10-2018 IPR001455 TusA-like domain AYJ52_07095 765e4324a282f6cfc4106b276e9c78cc 85 Gene3D G3DSA:3.30.110.40 2 85 1.1E-25 T 11-10-2018 IPR036868 TusA-like domain superfamily AYJ52_07095 765e4324a282f6cfc4106b276e9c78cc 85 SUPERFAMILY SSF64307 6 85 1.31E-20 T 11-10-2018 IPR036868 TusA-like domain superfamily AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 PRINTS PR00934 X-His dipeptidase (M25) signature 103 121 1.5E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 PRINTS PR00934 X-His dipeptidase (M25) signature 431 447 1.5E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 PRINTS PR00934 X-His dipeptidase (M25) signature 253 272 1.5E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 PRINTS PR00934 X-His dipeptidase (M25) signature 82 101 1.5E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 PRINTS PR00934 X-His dipeptidase (M25) signature 366 384 1.5E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 PRINTS PR00934 X-His dipeptidase (M25) signature 161 179 1.5E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 PRINTS PR00934 X-His dipeptidase (M25) signature 453 475 1.5E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 PRINTS PR00934 X-His dipeptidase (M25) signature 137 154 1.5E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 PRINTS PR00934 X-His dipeptidase (M25) signature 208 225 1.5E-68 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 Pfam PF01546 Peptidase family M20/M25/M40 74 482 2.4E-19 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 Gene3D G3DSA:3.40.630.10 374 486 5.1E-21 T 11-10-2018 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 Gene3D G3DSA:3.40.630.10 3 236 7.2E-59 T 11-10-2018 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 10 485 9.2E-159 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 Pfam PF07687 Peptidase dimerisation domain 212 292 1.1E-4 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 PIRSF PIRSF016599 3 486 2.4E-185 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AYJ52_17320 c7cfd36f70eaf19cfc1d443f451ba434 486 SUPERFAMILY SSF53187 14 483 4.86E-61 T 11-10-2018 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.7E-30 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 Gene3D G3DSA:3.10.50.30 76 158 4.0E-31 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 SUPERFAMILY SSF46557 3 78 1.44E-27 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.413 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 3.4E-28 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 Gene3D G3DSA:1.10.287.180 1 75 2.3E-30 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 4.1E-57 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 PIRSF PIRSF006092 1 158 1.4E-52 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AYJ52_00640 d3ce7278018322083d46555c46e6dfb1 158 SUPERFAMILY SSF54534 82 157 4.71E-24 T 11-10-2018 AYJ52_14225 19b182fefeb4d72a173b6a2555cc18d8 352 SUPERFAMILY SSF46689 289 339 1.65E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14225 19b182fefeb4d72a173b6a2555cc18d8 352 Pfam PF12833 Helix-turn-helix domain 258 337 3.6E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_14225 19b182fefeb4d72a173b6a2555cc18d8 352 Pfam PF14525 AraC-binding-like domain 39 213 7.4E-39 T 11-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AYJ52_14225 19b182fefeb4d72a173b6a2555cc18d8 352 Gene3D G3DSA:1.10.10.60 237 340 1.3E-34 T 11-10-2018 AYJ52_14225 19b182fefeb4d72a173b6a2555cc18d8 352 SMART SM00342 252 336 3.7E-29 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_14225 19b182fefeb4d72a173b6a2555cc18d8 352 SUPERFAMILY SSF46689 238 286 3.58E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_01860 cd65bd8bc91a5d9800feba00ea60ad0f 193 Pfam PF03734 L,D-transpeptidase catalytic domain 54 191 3.3E-16 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AYJ52_01860 cd65bd8bc91a5d9800feba00ea60ad0f 193 SUPERFAMILY SSF141523 53 192 5.62E-21 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AYJ52_01860 cd65bd8bc91a5d9800feba00ea60ad0f 193 Gene3D G3DSA:2.40.440.10 46 192 9.6E-15 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AYJ52_02340 58930e1f1ed3c6a591c4b93b578238ed 131 Pfam PF09413 Putative prokaryotic signal transducing protein 8 67 3.4E-6 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 AYJ52_02340 58930e1f1ed3c6a591c4b93b578238ed 131 SUPERFAMILY SSF54913 9 68 5.78E-5 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AYJ52_04040 09fe46b33d45c105b9557227a3e90c4d 100 Gene3D G3DSA:1.10.10.10 1 100 5.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_04040 09fe46b33d45c105b9557227a3e90c4d 100 Pfam PF12840 Helix-turn-helix domain 4 75 2.3E-14 T 11-10-2018 AYJ52_04040 09fe46b33d45c105b9557227a3e90c4d 100 SMART SM00418 5 94 5.6E-6 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_04040 09fe46b33d45c105b9557227a3e90c4d 100 SUPERFAMILY SSF46785 2 98 2.16E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12575 d0d7151d722c5a1c11fab1aa46d6c17e 94 Gene3D G3DSA:3.40.630.30 2 94 8.8E-23 T 11-10-2018 AYJ52_12575 d0d7151d722c5a1c11fab1aa46d6c17e 94 Pfam PF14542 GCN5-related N-acetyl-transferase 14 90 2.8E-20 T 11-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AYJ52_12575 d0d7151d722c5a1c11fab1aa46d6c17e 94 SUPERFAMILY SSF55729 3 92 5.4E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_06270 5bc6bcdf6cd108d9c160bd922731a209 153 Pfam PF14464 Prokaryotic homologs of the JAB domain 11 123 1.1E-11 T 11-10-2018 IPR028090 JAB domain, prokaryotic AYJ52_06270 5bc6bcdf6cd108d9c160bd922731a209 153 Gene3D G3DSA:3.40.140.10 1 148 3.2E-11 T 11-10-2018 AYJ52_06270 5bc6bcdf6cd108d9c160bd922731a209 153 SUPERFAMILY SSF102712 3 107 8.89E-11 T 11-10-2018 AYJ52_19150 34db60cde8c5683d45f7a653bf2f3708 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 1.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_19150 34db60cde8c5683d45f7a653bf2f3708 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 1.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_19150 34db60cde8c5683d45f7a653bf2f3708 339 SUPERFAMILY SSF46689 284 334 2.46E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_19150 34db60cde8c5683d45f7a653bf2f3708 339 Gene3D G3DSA:1.10.10.60 230 338 5.4E-21 T 11-10-2018 AYJ52_19150 34db60cde8c5683d45f7a653bf2f3708 339 SMART SM00342 249 331 7.7E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_19150 34db60cde8c5683d45f7a653bf2f3708 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 203 8.8E-32 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_19150 34db60cde8c5683d45f7a653bf2f3708 339 Pfam PF12833 Helix-turn-helix domain 258 332 8.8E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_05700 6e60954f0af6179295b5f477b1558611 102 PIRSF PIRSF003113 1 98 1.9E-32 T 11-10-2018 IPR002634 BolA protein AYJ52_05700 6e60954f0af6179295b5f477b1558611 102 SUPERFAMILY SSF82657 2 88 1.83E-26 T 11-10-2018 IPR036065 BolA-like superfamily AYJ52_05700 6e60954f0af6179295b5f477b1558611 102 Pfam PF01722 BolA-like protein 12 85 4.3E-25 T 11-10-2018 IPR002634 BolA protein AYJ52_05700 6e60954f0af6179295b5f477b1558611 102 Gene3D G3DSA:3.30.300.90 2 90 2.2E-26 T 11-10-2018 AYJ52_05320 64addd8449b2d2612530717dc9112a2c 363 Pfam PF14897 EpsG family 30 357 1.9E-35 T 11-10-2018 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 SUPERFAMILY SSF48256 6 422 2.49E-164 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 Gene3D G3DSA:2.20.28.60 2 52 4.9E-22 T 11-10-2018 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 PRINTS PR00143 Citrate synthase signature 167 180 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 PRINTS PR00143 Citrate synthase signature 360 376 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 PRINTS PR00143 Citrate synthase signature 244 272 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 PRINTS PR00143 Citrate synthase signature 297 317 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 PRINTS PR00143 Citrate synthase signature 380 394 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 PRINTS PR00143 Citrate synthase signature 222 237 3.3E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 PIRSF PIRSF001369 39 424 1.4E-170 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AYJ52_00775 5a551626d1f0802764791727319a2b26 424 Gene3D G3DSA:1.10.230.10 271 377 1.1E-145 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AYJ52_00775 5a551626d1f0802764791727319a2b26 424 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 7.4E-241 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 Pfam PF00285 Citrate synthase, C-terminal domain 48 411 9.4E-135 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_00775 5a551626d1f0802764791727319a2b26 424 Gene3D G3DSA:1.10.580.10 59 411 1.1E-145 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AYJ52_08950 af2ce6f683a46710a1a17b6fd2872094 350 Gene3D G3DSA:3.40.190.150 55 341 5.2E-56 T 11-10-2018 AYJ52_08950 af2ce6f683a46710a1a17b6fd2872094 350 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 81 347 3.5E-20 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AYJ52_08950 af2ce6f683a46710a1a17b6fd2872094 350 Gene3D G3DSA:3.40.190.10 149 276 5.2E-56 T 11-10-2018 AYJ52_08950 af2ce6f683a46710a1a17b6fd2872094 350 SUPERFAMILY SSF53850 63 255 2.58E-8 T 11-10-2018 AYJ52_08950 af2ce6f683a46710a1a17b6fd2872094 350 PIRSF PIRSF017082 17 350 7.7E-79 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AYJ52_18730 53574ab69611229a970ecf860b145103 153 SUPERFAMILY SSF52833 6 151 1.46E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_18730 53574ab69611229a970ecf860b145103 153 Pfam PF00578 AhpC/TSA family 11 128 2.1E-25 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AYJ52_18730 53574ab69611229a970ecf860b145103 153 Gene3D G3DSA:3.40.30.10 4 151 4.0E-35 T 11-10-2018 AYJ52_18730 53574ab69611229a970ecf860b145103 153 PIRSF PIRSF000239 4 153 2.2E-23 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AYJ52_16285 07c94e41f6ccfe121590dbbc9fef49ef 185 SUPERFAMILY SSF48600 37 182 6.0E-32 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AYJ52_16285 07c94e41f6ccfe121590dbbc9fef49ef 185 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 28 140 7.9E-38 T 11-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AYJ52_16285 07c94e41f6ccfe121590dbbc9fef49ef 185 PIRSF PIRSF026640 5 185 3.5E-49 T 11-10-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AYJ52_16285 07c94e41f6ccfe121590dbbc9fef49ef 185 Gene3D G3DSA:1.20.140.170 30 184 2.6E-55 T 11-10-2018 AYJ52_16285 07c94e41f6ccfe121590dbbc9fef49ef 185 SMART SM00830 34 105 1.5E-8 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AYJ52_16285 07c94e41f6ccfe121590dbbc9fef49ef 185 Pfam PF01817 Chorismate mutase type II 36 103 7.4E-8 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AYJ52_15730 c776210377c5044d4a5c90a7ff4f5164 174 SUPERFAMILY SSF52799 9 132 1.58E-14 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AYJ52_15730 c776210377c5044d4a5c90a7ff4f5164 174 Gene3D G3DSA:3.90.190.10 4 155 3.9E-30 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AYJ52_17975 f0d51254c6a762d925e60114a66f213c 223 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 2.1E-122 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AYJ52_17975 f0d51254c6a762d925e60114a66f213c 223 Pfam PF01144 Coenzyme A transferase 8 218 9.1E-74 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_17975 f0d51254c6a762d925e60114a66f213c 223 SUPERFAMILY SSF100950 2 220 8.97E-80 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_17975 f0d51254c6a762d925e60114a66f213c 223 Gene3D G3DSA:3.40.1080.10 1 218 5.2E-80 T 11-10-2018 AYJ52_17975 f0d51254c6a762d925e60114a66f213c 223 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AYJ52_17975 f0d51254c6a762d925e60114a66f213c 223 SMART SM00882 6 219 2.7E-81 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_15005 f0d51254c6a762d925e60114a66f213c 223 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 2.1E-122 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AYJ52_15005 f0d51254c6a762d925e60114a66f213c 223 Pfam PF01144 Coenzyme A transferase 8 218 9.1E-74 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_15005 f0d51254c6a762d925e60114a66f213c 223 SUPERFAMILY SSF100950 2 220 8.97E-80 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_15005 f0d51254c6a762d925e60114a66f213c 223 Gene3D G3DSA:3.40.1080.10 1 218 5.2E-80 T 11-10-2018 AYJ52_15005 f0d51254c6a762d925e60114a66f213c 223 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AYJ52_15005 f0d51254c6a762d925e60114a66f213c 223 SMART SM00882 6 219 2.7E-81 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_15225 f0d51254c6a762d925e60114a66f213c 223 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 2.1E-122 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AYJ52_15225 f0d51254c6a762d925e60114a66f213c 223 Pfam PF01144 Coenzyme A transferase 8 218 9.1E-74 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_15225 f0d51254c6a762d925e60114a66f213c 223 SUPERFAMILY SSF100950 2 220 8.97E-80 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_15225 f0d51254c6a762d925e60114a66f213c 223 Gene3D G3DSA:3.40.1080.10 1 218 5.2E-80 T 11-10-2018 AYJ52_15225 f0d51254c6a762d925e60114a66f213c 223 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AYJ52_15225 f0d51254c6a762d925e60114a66f213c 223 SMART SM00882 6 219 2.7E-81 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_18500 00bee36b45927af3d829bdb69ffe2b17 218 Gene3D G3DSA:1.20.1440.100 26 97 3.9E-38 T 11-10-2018 AYJ52_18500 00bee36b45927af3d829bdb69ffe2b17 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 14 196 2.3E-24 T 11-10-2018 AYJ52_18500 00bee36b45927af3d829bdb69ffe2b17 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 14 205 9.9E-33 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AYJ52_18500 00bee36b45927af3d829bdb69ffe2b17 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 193 1.5E-27 T 11-10-2018 AYJ52_18500 00bee36b45927af3d829bdb69ffe2b17 218 Gene3D G3DSA:3.40.50.1000 14 211 3.9E-38 T 11-10-2018 IPR023214 HAD superfamily AYJ52_18500 00bee36b45927af3d829bdb69ffe2b17 218 SUPERFAMILY SSF56784 13 207 7.41E-20 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_13440 fa24b60fb8fc315296226ad91a05ac36 575 SUPERFAMILY SSF52540 324 570 1.13E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13440 fa24b60fb8fc315296226ad91a05ac36 575 SUPERFAMILY SSF90123 10 320 3.4E-71 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_13440 fa24b60fb8fc315296226ad91a05ac36 575 Pfam PF00005 ABC transporter 352 501 4.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_13440 fa24b60fb8fc315296226ad91a05ac36 575 Gene3D G3DSA:3.40.50.300 326 574 4.1E-94 T 11-10-2018 AYJ52_13440 fa24b60fb8fc315296226ad91a05ac36 575 Gene3D G3DSA:1.20.1560.10 1 324 2.1E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_13440 fa24b60fb8fc315296226ad91a05ac36 575 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_13440 fa24b60fb8fc315296226ad91a05ac36 575 SMART SM00382 360 547 2.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_13440 fa24b60fb8fc315296226ad91a05ac36 575 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 8 573 1.2E-208 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AYJ52_13440 fa24b60fb8fc315296226ad91a05ac36 575 Pfam PF00664 ABC transporter transmembrane region 28 288 7.8E-48 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AYJ52_10285 16e2fb8be68caefa05314615ea7b6cbf 334 Pfam PF02780 Transketolase, C-terminal domain 203 325 3.6E-28 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AYJ52_10285 16e2fb8be68caefa05314615ea7b6cbf 334 SUPERFAMILY SSF52518 23 192 3.0E-48 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_10285 16e2fb8be68caefa05314615ea7b6cbf 334 SUPERFAMILY SSF52922 197 333 1.96E-31 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_10285 16e2fb8be68caefa05314615ea7b6cbf 334 Pfam PF02779 Transketolase, pyrimidine binding domain 33 190 1.5E-33 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ52_10285 16e2fb8be68caefa05314615ea7b6cbf 334 Gene3D G3DSA:3.40.50.970 6 197 7.0E-50 T 11-10-2018 AYJ52_10285 16e2fb8be68caefa05314615ea7b6cbf 334 Gene3D G3DSA:3.40.50.920 203 333 3.5E-34 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_10285 16e2fb8be68caefa05314615ea7b6cbf 334 SMART SM00861 27 191 2.4E-43 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ52_15130 76741e27239b3c5534f71de5ed30d0f4 270 Pfam PF09339 IclR helix-turn-helix domain 27 76 2.2E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_15130 76741e27239b3c5534f71de5ed30d0f4 270 Pfam PF01614 Bacterial transcriptional regulator 144 267 1.2E-40 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AYJ52_15130 76741e27239b3c5534f71de5ed30d0f4 270 SUPERFAMILY SSF55781 92 270 2.55E-39 T 11-10-2018 AYJ52_15130 76741e27239b3c5534f71de5ed30d0f4 270 SUPERFAMILY SSF46785 26 93 2.55E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_15130 76741e27239b3c5534f71de5ed30d0f4 270 SMART SM00346 23 111 8.1E-17 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_15130 76741e27239b3c5534f71de5ed30d0f4 270 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 19 270 1.4E-95 T 11-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 AYJ52_15130 76741e27239b3c5534f71de5ed30d0f4 270 Gene3D G3DSA:3.30.450.40 91 270 2.1E-48 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_15130 76741e27239b3c5534f71de5ed30d0f4 270 Gene3D G3DSA:1.10.10.10 8 88 1.9E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_13930 a2c4c9ab358c08d231d2415d842f0dd9 283 Gene3D G3DSA:3.40.190.10 96 277 2.8E-15 T 11-10-2018 AYJ52_13930 a2c4c9ab358c08d231d2415d842f0dd9 283 Gene3D G3DSA:3.40.190.10 154 253 2.8E-15 T 11-10-2018 AYJ52_13930 a2c4c9ab358c08d231d2415d842f0dd9 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.4E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_13930 a2c4c9ab358c08d231d2415d842f0dd9 283 SUPERFAMILY SSF53850 91 282 2.9E-6 T 11-10-2018 AYJ52_13930 a2c4c9ab358c08d231d2415d842f0dd9 283 SUPERFAMILY SSF46785 2 84 1.41E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_13930 a2c4c9ab358c08d231d2415d842f0dd9 283 Gene3D G3DSA:1.10.10.10 2 91 5.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_17710 1175eb86fda5992792d7945af88a0579 292 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 13 291 1.2E-95 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AYJ52_17710 1175eb86fda5992792d7945af88a0579 292 Gene3D G3DSA:1.10.357.140 26 171 2.6E-38 T 11-10-2018 AYJ52_17710 1175eb86fda5992792d7945af88a0579 292 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 8 292 28.13 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AYJ52_17710 1175eb86fda5992792d7945af88a0579 292 Gene3D G3DSA:1.20.120.1780 172 292 3.5E-12 T 11-10-2018 AYJ52_17710 1175eb86fda5992792d7945af88a0579 292 Pfam PF01040 UbiA prenyltransferase family 31 275 9.9E-57 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 4.8E-253 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.893 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 5.2E-20 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 SMART SM00382 140 331 2.9E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 Gene3D G3DSA:2.40.10.170 1 73 3.3E-30 T 11-10-2018 AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 SUPERFAMILY SSF47917 349 463 3.4E-53 T 11-10-2018 AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 7.4E-63 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 SUPERFAMILY SSF52540 75 352 2.85E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 SUPERFAMILY SSF50615 2 73 4.19E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 Gene3D G3DSA:3.40.50.300 74 348 8.1E-113 T 11-10-2018 AYJ52_05855 b406fe6caa67a07d7029344d0d110a5e 464 Gene3D G3DSA:1.10.1140.10 349 464 9.5E-58 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 Gene3D G3DSA:2.140.10.10 160 564 4.5E-112 T 11-10-2018 AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 SUPERFAMILY SSF50998 162 798 1.19E-151 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 409 430 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 Pfam PF01011 PQQ enzyme repeat 727 764 1.9E-7 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 Pfam PF01011 PQQ enzyme repeat 444 473 1.3E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 13 798 0.0 T 11-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 Pfam PF13360 PQQ-like domain 217 393 1.9E-6 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 165 193 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 SMART SM00564 344 385 0.16 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 SMART SM00564 287 319 110.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 SMART SM00564 414 463 59.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 SMART SM00564 217 249 1.5E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 SMART SM00564 721 754 0.006 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_01695 c67da063d6e45bd1796433f5fbbd5ef7 801 Gene3D G3DSA:2.140.10.10 571 801 1.1E-34 T 11-10-2018 AYJ52_18130 4eb04a0efef3dada76a33d83ce169e0b 338 Pfam PF13394 4Fe-4S single cluster domain 114 172 9.9E-6 T 11-10-2018 AYJ52_18130 4eb04a0efef3dada76a33d83ce169e0b 338 TIGRFAM TIGR00238 TIGR00238: KamA family protein 8 325 1.7E-99 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AYJ52_18130 4eb04a0efef3dada76a33d83ce169e0b 338 SUPERFAMILY SSF102114 98 322 5.89E-22 T 11-10-2018 AYJ52_18130 4eb04a0efef3dada76a33d83ce169e0b 338 Gene3D G3DSA:3.20.20.70 46 331 4.6E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_18130 4eb04a0efef3dada76a33d83ce169e0b 338 Pfam PF04055 Radical SAM superfamily 113 217 3.5E-8 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_18130 4eb04a0efef3dada76a33d83ce169e0b 338 PIRSF PIRSF004911 4 337 1.4E-107 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AYJ52_18130 4eb04a0efef3dada76a33d83ce169e0b 338 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 11 332 1.7E-133 T 11-10-2018 IPR022462 Lysine-2,3-aminomutase-like AYJ52_15295 ab3fb316923ee419344a03ad0fca702b 364 Gene3D G3DSA:3.40.50.1820 69 358 1.9E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15295 ab3fb316923ee419344a03ad0fca702b 364 SUPERFAMILY SSF53474 83 357 1.37E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15295 ab3fb316923ee419344a03ad0fca702b 364 PIRSF PIRSF005211 4 364 7.7E-57 T 11-10-2018 IPR012020 AB hydrolase 4 family AYJ52_15295 ab3fb316923ee419344a03ad0fca702b 364 Pfam PF12146 Serine aminopeptidase, S33 107 322 1.1E-6 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AYJ52_07050 21fb17f2f1dff89733823d67ca553569 291 Gene3D G3DSA:3.90.1280.10 231 288 5.4E-19 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AYJ52_07050 21fb17f2f1dff89733823d67ca553569 291 Pfam PF01430 Hsp33 protein 5 278 3.0E-71 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AYJ52_07050 21fb17f2f1dff89733823d67ca553569 291 SUPERFAMILY SSF64397 3 237 1.29E-59 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AYJ52_07050 21fb17f2f1dff89733823d67ca553569 291 Gene3D G3DSA:3.55.30.10 1 175 4.2E-49 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AYJ52_07050 21fb17f2f1dff89733823d67ca553569 291 SUPERFAMILY SSF118352 231 287 2.88E-16 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AYJ52_07050 21fb17f2f1dff89733823d67ca553569 291 PIRSF PIRSF005261 1 289 7.1E-63 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AYJ52_07050 21fb17f2f1dff89733823d67ca553569 291 Gene3D G3DSA:1.10.287.480 183 230 2.3E-18 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AYJ52_01440 35d84f5a9bc068ea494c2221898d528b 378 SUPERFAMILY SSF53187 3 376 2.11E-62 T 11-10-2018 AYJ52_01440 35d84f5a9bc068ea494c2221898d528b 378 SUPERFAMILY SSF55031 181 289 1.64E-31 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AYJ52_01440 35d84f5a9bc068ea494c2221898d528b 378 Pfam PF07687 Peptidase dimerisation domain 177 284 1.5E-25 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AYJ52_01440 35d84f5a9bc068ea494c2221898d528b 378 Pfam PF01546 Peptidase family M20/M25/M40 64 374 1.2E-42 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AYJ52_01440 35d84f5a9bc068ea494c2221898d528b 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 53.133 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AYJ52_01440 35d84f5a9bc068ea494c2221898d528b 378 Gene3D G3DSA:3.40.630.10 12 364 1.3E-130 T 11-10-2018 AYJ52_01440 35d84f5a9bc068ea494c2221898d528b 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 8 375 5.3E-172 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AYJ52_01440 35d84f5a9bc068ea494c2221898d528b 378 Gene3D G3DSA:3.30.70.360 181 294 1.3E-130 T 11-10-2018 AYJ52_11060 a4472414579eb85227b06a4bff78c8d7 556 Gene3D G3DSA:3.50.50.60 6 145 2.4E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11060 a4472414579eb85227b06a4bff78c8d7 556 Gene3D G3DSA:3.50.50.60 188 332 2.1E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11060 a4472414579eb85227b06a4bff78c8d7 556 Gene3D G3DSA:3.50.50.60 441 534 6.2E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11060 a4472414579eb85227b06a4bff78c8d7 556 Pfam PF00732 GMC oxidoreductase 8 284 1.5E-9 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AYJ52_11060 a4472414579eb85227b06a4bff78c8d7 556 Pfam PF05199 GMC oxidoreductase 469 526 3.7E-17 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AYJ52_11060 a4472414579eb85227b06a4bff78c8d7 556 SUPERFAMILY SSF51905 4 534 1.39E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_17760 cfb5939e37f7e5f068cc7eeaae86bd8c 231 Pfam PF01713 Smr domain 143 219 8.5E-20 T 11-10-2018 IPR002625 Smr domain AYJ52_17760 cfb5939e37f7e5f068cc7eeaae86bd8c 231 SUPERFAMILY SSF160443 143 219 2.75E-13 T 11-10-2018 IPR036063 Smr domain superfamily AYJ52_17760 cfb5939e37f7e5f068cc7eeaae86bd8c 231 Gene3D G3DSA:3.30.1370.110 95 224 7.4E-33 T 11-10-2018 AYJ52_17760 cfb5939e37f7e5f068cc7eeaae86bd8c 231 SMART SM00463 138 219 1.0E-8 T 11-10-2018 IPR002625 Smr domain AYJ52_10635 1dfef7dc4a3c3bdb5180cd773153aacd 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.3E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_10635 1dfef7dc4a3c3bdb5180cd773153aacd 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.3E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_10635 1dfef7dc4a3c3bdb5180cd773153aacd 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.3E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_10635 1dfef7dc4a3c3bdb5180cd773153aacd 133 SUPERFAMILY SSF46955 3 127 6.96E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_10635 1dfef7dc4a3c3bdb5180cd773153aacd 133 Gene3D G3DSA:1.10.1660.10 1 129 2.2E-29 T 11-10-2018 AYJ52_10635 1dfef7dc4a3c3bdb5180cd773153aacd 133 Pfam PF13411 MerR HTH family regulatory protein 4 68 1.8E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_10635 1dfef7dc4a3c3bdb5180cd773153aacd 133 SMART SM00422 3 72 6.0E-22 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_08300 7fca94701427322f3bbda49a17dea8bc 309 SUPERFAMILY SSF103515 156 308 3.4E-8 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily AYJ52_08300 7fca94701427322f3bbda49a17dea8bc 309 Gene3D G3DSA:2.40.128.130 150 309 2.9E-5 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily AYJ52_08300 7fca94701427322f3bbda49a17dea8bc 309 Pfam PF05275 Copper resistance protein B precursor (CopB) 105 309 2.1E-49 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 Gene3D G3DSA:2.30.42.10 252 355 8.7E-30 T 11-10-2018 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 Gene3D G3DSA:2.30.42.10 365 458 4.5E-13 T 11-10-2018 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 SUPERFAMILY SSF50156 367 455 9.2E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 Pfam PF13180 PDZ domain 368 451 9.7E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 Pfam PF13180 PDZ domain 258 348 2.7E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 SUPERFAMILY SSF50156 238 347 5.53E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 Gene3D G3DSA:2.40.10.120 26 250 2.9E-75 T 11-10-2018 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 27 452 3.8E-138 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 PRINTS PR00834 HtrA/DegQ protease family signature 211 228 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 PRINTS PR00834 HtrA/DegQ protease family signature 189 206 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 PRINTS PR00834 HtrA/DegQ protease family signature 115 135 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 PRINTS PR00834 HtrA/DegQ protease family signature 155 179 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 PRINTS PR00834 HtrA/DegQ protease family signature 94 106 9.7E-48 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 Pfam PF13365 Trypsin-like peptidase domain 85 218 3.2E-34 T 11-10-2018 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 SUPERFAMILY SSF50494 1 266 8.58E-63 T 11-10-2018 IPR009003 Peptidase S1, PA clan AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 SMART SM00228 368 448 5.7E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_18640 4694b46f5d47753f46c28d6c89bdd30f 458 SMART SM00228 257 339 3.7E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_19595 873e1b9a8ce14b36e9d464be87a39179 79 Gene3D G3DSA:3.30.565.10 1 78 1.9E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_19595 873e1b9a8ce14b36e9d464be87a39179 79 PRINTS PR00344 Bacterial sensor protein C-terminal signature 34 52 6.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_19595 873e1b9a8ce14b36e9d464be87a39179 79 PRINTS PR00344 Bacterial sensor protein C-terminal signature 17 27 6.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_19595 873e1b9a8ce14b36e9d464be87a39179 79 PRINTS PR00344 Bacterial sensor protein C-terminal signature 59 72 6.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_19595 873e1b9a8ce14b36e9d464be87a39179 79 SUPERFAMILY SSF55874 2 71 2.1E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_19595 873e1b9a8ce14b36e9d464be87a39179 79 SMART SM00387 1 75 0.0086 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_19595 873e1b9a8ce14b36e9d464be87a39179 79 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1 72 8.6E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_11350 54f11dbe03210dd965f5ba9db3bfd9de 166 Pfam PF00866 Ring hydroxylating beta subunit 18 158 3.9E-49 T 11-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 AYJ52_11350 54f11dbe03210dd965f5ba9db3bfd9de 166 SUPERFAMILY SSF54427 6 166 6.68E-56 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_11350 54f11dbe03210dd965f5ba9db3bfd9de 166 Gene3D G3DSA:3.10.450.50 4 166 1.7E-48 T 11-10-2018 AYJ52_11350 54f11dbe03210dd965f5ba9db3bfd9de 166 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 12 166 2.9E-92 T 11-10-2018 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0055114 AYJ52_03110 33b2a32375c34894eae265218551dce7 83 SUPERFAMILY SSF54565 1 75 5.36E-29 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03110 33b2a32375c34894eae265218551dce7 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_03110 33b2a32375c34894eae265218551dce7 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.603 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03110 33b2a32375c34894eae265218551dce7 83 Gene3D G3DSA:3.30.1320.10 1 82 6.2E-32 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03110 33b2a32375c34894eae265218551dce7 83 Pfam PF00886 Ribosomal protein S16 8 68 6.3E-26 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03110 33b2a32375c34894eae265218551dce7 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.2E-29 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_12585 bbfef801b2f81ce8ca81e5684ebfd707 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 218 1.1E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_12585 bbfef801b2f81ce8ca81e5684ebfd707 221 SUPERFAMILY SSF161098 14 209 1.2E-36 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_12585 bbfef801b2f81ce8ca81e5684ebfd707 221 Gene3D G3DSA:1.10.3720.10 1 221 2.2E-44 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_12585 bbfef801b2f81ce8ca81e5684ebfd707 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 1.7E-16 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AYJ52_17015 016b7f89933eed9c48def2ef4f69defb 202 Pfam PF04403 Paraquat-inducible protein A 45 197 5.1E-38 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 PRINTS PR01806 Virulence factor MviN signature 157 178 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 PRINTS PR01806 Virulence factor MviN signature 52 68 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 PRINTS PR01806 Virulence factor MviN signature 133 157 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 PRINTS PR01806 Virulence factor MviN signature 416 433 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 PRINTS PR01806 Virulence factor MviN signature 357 376 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 PRINTS PR01806 Virulence factor MviN signature 33 52 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 PRINTS PR01806 Virulence factor MviN signature 259 285 1.1E-69 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 503 2.0E-131 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 PIRSF PIRSF002869 1 512 1.5E-154 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 474 19.628 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_05270 ea85016781ce576e5cdeb39d06476252 513 Pfam PF03023 MviN-like protein 30 472 4.1E-129 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ52_18430 ac7eacbb738e16fc3b4c25b8cbe20fde 428 Gene3D G3DSA:3.50.50.100 1 409 1.9E-106 T 11-10-2018 AYJ52_18430 ac7eacbb738e16fc3b4c25b8cbe20fde 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 2.1E-11 T 11-10-2018 AYJ52_18430 ac7eacbb738e16fc3b4c25b8cbe20fde 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.1E-11 T 11-10-2018 AYJ52_18430 ac7eacbb738e16fc3b4c25b8cbe20fde 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.1E-11 T 11-10-2018 AYJ52_18430 ac7eacbb738e16fc3b4c25b8cbe20fde 428 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 2.1E-11 T 11-10-2018 AYJ52_18430 ac7eacbb738e16fc3b4c25b8cbe20fde 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 4.8E-6 T 11-10-2018 AYJ52_18430 ac7eacbb738e16fc3b4c25b8cbe20fde 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.8E-6 T 11-10-2018 AYJ52_18430 ac7eacbb738e16fc3b4c25b8cbe20fde 428 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 4.8E-6 T 11-10-2018 AYJ52_18430 ac7eacbb738e16fc3b4c25b8cbe20fde 428 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 337 5.1E-51 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_18430 ac7eacbb738e16fc3b4c25b8cbe20fde 428 SUPERFAMILY SSF51905 6 354 3.33E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14715 317f36ec2eb1bceda2715f3b2916a625 522 Gene3D G3DSA:3.40.309.10 272 474 1.0E-160 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_14715 317f36ec2eb1bceda2715f3b2916a625 522 Gene3D G3DSA:3.40.605.10 46 482 1.0E-160 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_14715 317f36ec2eb1bceda2715f3b2916a625 522 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 30 505 9.7E-203 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AYJ52_14715 317f36ec2eb1bceda2715f3b2916a625 522 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_14715 317f36ec2eb1bceda2715f3b2916a625 522 Pfam PF00171 Aldehyde dehydrogenase family 38 501 7.6E-144 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_14715 317f36ec2eb1bceda2715f3b2916a625 522 SUPERFAMILY SSF53720 25 507 2.88E-149 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_10660 3d1f5a3d96b8d61191763bf460236ad7 278 Gene3D G3DSA:3.40.1010.10 1 111 2.1E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AYJ52_10660 3d1f5a3d96b8d61191763bf460236ad7 278 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 204 3.2E-31 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AYJ52_10660 3d1f5a3d96b8d61191763bf460236ad7 278 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 82 93 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 AYJ52_10660 3d1f5a3d96b8d61191763bf460236ad7 278 Gene3D G3DSA:3.30.950.10 112 231 1.0E-39 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AYJ52_10660 3d1f5a3d96b8d61191763bf460236ad7 278 PIRSF PIRSF005917 1 278 6.5E-101 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AYJ52_10660 3d1f5a3d96b8d61191763bf460236ad7 278 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 225 36.842 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AYJ52_10660 3d1f5a3d96b8d61191763bf460236ad7 278 SUPERFAMILY SSF53790 4 223 3.93E-80 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AYJ52_10660 3d1f5a3d96b8d61191763bf460236ad7 278 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 273 1.0E-83 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AYJ52_05775 8b3d2a281a256a2a03660c57f65b1a87 204 Pfam PF05036 Sporulation related domain 129 202 3.0E-18 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AYJ52_05775 8b3d2a281a256a2a03660c57f65b1a87 204 Gene3D G3DSA:3.30.70.1070 123 204 3.5E-16 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AYJ52_05775 8b3d2a281a256a2a03660c57f65b1a87 204 SUPERFAMILY SSF110997 127 202 3.92E-16 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AYJ52_13320 b075d64d5d905f46f665a7e214e8a30f 124 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 122 1.1E-50 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AYJ52_13320 b075d64d5d905f46f665a7e214e8a30f 124 Gene3D G3DSA:2.40.50.100 1 124 4.6E-50 T 11-10-2018 AYJ52_13320 b075d64d5d905f46f665a7e214e8a30f 124 SUPERFAMILY SSF51230 3 122 3.06E-45 T 11-10-2018 IPR011053 Single hybrid motif AYJ52_13320 b075d64d5d905f46f665a7e214e8a30f 124 Pfam PF01597 Glycine cleavage H-protein 7 122 2.4E-46 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AYJ52_13320 b075d64d5d905f46f665a7e214e8a30f 124 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AYJ52_13320 b075d64d5d905f46f665a7e214e8a30f 124 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 123 36.696 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AYJ52_12840 a22705d50e2f6674d02d190afa4e472c 624 SUPERFAMILY SSF51338 5 536 7.2E-19 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_12840 a22705d50e2f6674d02d190afa4e472c 624 Gene3D G3DSA:3.20.20.140 63 493 1.0E-92 T 11-10-2018 AYJ52_12840 a22705d50e2f6674d02d190afa4e472c 624 SUPERFAMILY SSF51556 62 494 4.3E-44 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_12840 a22705d50e2f6674d02d190afa4e472c 624 Gene3D G3DSA:2.30.40.10 10 509 1.0E-92 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_12840 a22705d50e2f6674d02d190afa4e472c 624 Gene3D G3DSA:3.10.310.70 82 192 1.0E-92 T 11-10-2018 AYJ52_12840 a22705d50e2f6674d02d190afa4e472c 624 Pfam PF07969 Amidohydrolase family 51 534 2.4E-118 T 11-10-2018 IPR013108 Amidohydrolase 3 AYJ52_12850 0cfc255bb18eac3d2984dfd7b88f2da9 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.5E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_12850 0cfc255bb18eac3d2984dfd7b88f2da9 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.5E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_12850 0cfc255bb18eac3d2984dfd7b88f2da9 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.5E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_12850 0cfc255bb18eac3d2984dfd7b88f2da9 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 1.5E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_12850 0cfc255bb18eac3d2984dfd7b88f2da9 109 Gene3D G3DSA:1.10.10.10 1 94 8.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12850 0cfc255bb18eac3d2984dfd7b88f2da9 109 Pfam PF01022 Bacterial regulatory protein, arsR family 13 57 3.9E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_12850 0cfc255bb18eac3d2984dfd7b88f2da9 109 SMART SM00418 6 84 1.3E-25 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AYJ52_12850 0cfc255bb18eac3d2984dfd7b88f2da9 109 SUPERFAMILY SSF46785 4 87 3.48E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_02710 4925298f6d2767f2d435f0d95a9cd417 515 Pfam PF05872 Bacterial protein of unknown function (DUF853) 11 514 1.5E-232 T 11-10-2018 IPR033186 Helicase HerA-like C-terminal AYJ52_02710 4925298f6d2767f2d435f0d95a9cd417 515 Gene3D G3DSA:3.40.50.300 3 173 6.5E-10 T 11-10-2018 AYJ52_02710 4925298f6d2767f2d435f0d95a9cd417 515 SUPERFAMILY SSF52540 3 386 5.47E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02710 4925298f6d2767f2d435f0d95a9cd417 515 Gene3D G3DSA:3.40.50.300 203 379 4.3E-21 T 11-10-2018 AYJ52_14000 d90009dc582748885eb3bace15f35cfb 328 Pfam PF04055 Radical SAM superfamily 88 248 8.7E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_14000 d90009dc582748885eb3bace15f35cfb 328 Gene3D G3DSA:3.20.20.70 74 286 1.6E-19 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_14000 d90009dc582748885eb3bace15f35cfb 328 SMART SM00729 81 287 3.0E-17 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AYJ52_14000 d90009dc582748885eb3bace15f35cfb 328 Hamap MF_00206 Lipoyl synthase [lipA]. 1 320 142.38 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AYJ52_14000 d90009dc582748885eb3bace15f35cfb 328 TIGRFAM TIGR00510 lipA: lipoyl synthase 29 311 6.2E-119 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AYJ52_14000 d90009dc582748885eb3bace15f35cfb 328 PIRSF PIRSF005963 8 325 8.0E-126 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AYJ52_14000 d90009dc582748885eb3bace15f35cfb 328 SUPERFAMILY SSF102114 49 316 7.59E-60 T 11-10-2018 AYJ52_11740 f4daaa7effde01ebaea3e651af337fe5 446 Gene3D G3DSA:3.40.640.10 80 339 3.1E-130 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_11740 f4daaa7effde01ebaea3e651af337fe5 446 PIRSF PIRSF000521 6 147 9.6E-9 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_11740 f4daaa7effde01ebaea3e651af337fe5 446 PIRSF PIRSF000521 198 445 1.5E-28 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_11740 f4daaa7effde01ebaea3e651af337fe5 446 Pfam PF00202 Aminotransferase class-III 48 442 1.2E-76 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_11740 f4daaa7effde01ebaea3e651af337fe5 446 Gene3D G3DSA:3.90.1150.10 47 438 3.1E-130 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_11740 f4daaa7effde01ebaea3e651af337fe5 446 SUPERFAMILY SSF53383 40 445 5.38E-103 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_11740 f4daaa7effde01ebaea3e651af337fe5 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 292 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_02260 9c11210c0795b7d38df1fe84b9913ccf 119 Gene3D G3DSA:3.30.450.30 3 117 3.0E-5 T 11-10-2018 AYJ52_02260 9c11210c0795b7d38df1fe84b9913ccf 119 SUPERFAMILY SSF103196 7 116 9.94E-6 T 11-10-2018 AYJ52_02395 cb583f556660fa08e99fcbc4601a44ab 81 Gene3D G3DSA:1.10.10.1130 1 79 3.6E-28 T 11-10-2018 AYJ52_02395 cb583f556660fa08e99fcbc4601a44ab 81 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 7.2E-27 T 11-10-2018 IPR021250 Protein of unknown function DUF2789 AYJ52_16950 fec7db80ef44940a1c6c286f2dfb8354 259 Pfam PF06966 Protein of unknown function (DUF1295) 17 249 1.3E-56 T 11-10-2018 IPR010721 Protein of unknown function DUF1295 AYJ52_16950 fec7db80ef44940a1c6c286f2dfb8354 259 Gene3D G3DSA:1.20.120.1630 55 255 4.9E-18 T 11-10-2018 AYJ52_04430 ebce6698354613395d8cef3744654cf6 407 Pfam PF12710 haloacid dehalogenase-like hydrolase 195 362 3.4E-21 T 11-10-2018 AYJ52_04430 ebce6698354613395d8cef3744654cf6 407 SUPERFAMILY SSF55021 1 81 3.58E-9 T 11-10-2018 AYJ52_04430 ebce6698354613395d8cef3744654cf6 407 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 179 397 7.1E-80 T 11-10-2018 AYJ52_04430 ebce6698354613395d8cef3744654cf6 407 SUPERFAMILY SSF56784 190 397 2.27E-52 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_04430 ebce6698354613395d8cef3744654cf6 407 Pfam PF13740 ACT domain 3 79 5.4E-22 T 11-10-2018 AYJ52_04430 ebce6698354613395d8cef3744654cf6 407 Gene3D G3DSA:3.40.50.1000 105 398 2.6E-83 T 11-10-2018 IPR023214 HAD superfamily AYJ52_04430 ebce6698354613395d8cef3744654cf6 407 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 194 364 6.3E-31 T 11-10-2018 AYJ52_04430 ebce6698354613395d8cef3744654cf6 407 Gene3D G3DSA:3.30.70.260 2 82 1.5E-8 T 11-10-2018 AYJ52_08325 ffca5f761bdfa6d925beb20258174ab5 120 Pfam PF11604 Copper binding periplasmic protein CusF 52 113 1.6E-23 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF AYJ52_08325 ffca5f761bdfa6d925beb20258174ab5 120 Gene3D G3DSA:2.40.50.320 46 120 4.1E-25 T 11-10-2018 AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.646 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 Gene3D G3DSA:2.70.210.12 1 158 8.0E-60 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 Pfam PF01926 50S ribosome-binding GTPase 161 284 4.2E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 Pfam PF01018 GTP1/OBG 4 158 4.7E-59 T 11-10-2018 IPR006169 GTP1/OBG domain AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 Gene3D G3DSA:3.40.50.300 159 341 2.1E-48 T 11-10-2018 AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.7E-143 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 SUPERFAMILY SSF82051 3 158 1.31E-56 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.2E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.2E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.2E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.2E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 PIRSF PIRSF002401 1 380 3.4E-136 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type AYJ52_18510 55f389a095097aa065f17b397aba5d1d 406 SUPERFAMILY SSF52540 151 337 1.05E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_12160 3a37076526f25057f4210c250ced4f6b 700 SUPERFAMILY SSF53720 27 524 1.23E-81 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_12160 3a37076526f25057f4210c250ced4f6b 700 Gene3D G3DSA:3.10.129.10 545 699 2.8E-43 T 11-10-2018 AYJ52_12160 3a37076526f25057f4210c250ced4f6b 700 Pfam PF01575 MaoC like domain 560 661 1.3E-28 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AYJ52_12160 3a37076526f25057f4210c250ced4f6b 700 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 26 698 1.5E-301 T 11-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 AYJ52_12160 3a37076526f25057f4210c250ced4f6b 700 Gene3D G3DSA:3.40.309.10 280 495 5.8E-148 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_12160 3a37076526f25057f4210c250ced4f6b 700 SUPERFAMILY SSF54637 549 699 1.23E-38 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_12160 3a37076526f25057f4210c250ced4f6b 700 Gene3D G3DSA:3.40.605.10 32 507 5.8E-148 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_12160 3a37076526f25057f4210c250ced4f6b 700 Pfam PF00171 Aldehyde dehydrogenase family 34 520 3.4E-67 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_02030 3800bf9bc5972bf5a03c8fc54d1ef71c 109 Pfam PF02699 Preprotein translocase subunit 24 97 1.3E-26 T 11-10-2018 IPR003849 Preprotein translocase YajC AYJ52_02030 3800bf9bc5972bf5a03c8fc54d1ef71c 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 41 59 2.4E-12 T 11-10-2018 IPR003849 Preprotein translocase YajC AYJ52_02030 3800bf9bc5972bf5a03c8fc54d1ef71c 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 2.4E-12 T 11-10-2018 IPR003849 Preprotein translocase YajC AYJ52_02030 3800bf9bc5972bf5a03c8fc54d1ef71c 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 101 7.1E-26 T 11-10-2018 IPR003849 Preprotein translocase YajC AYJ52_02030 3800bf9bc5972bf5a03c8fc54d1ef71c 109 SMART SM01323 19 101 7.7E-37 T 11-10-2018 IPR003849 Preprotein translocase YajC AYJ52_10565 53f1caa14c7e98bdd86307a70ff6353d 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 257 1.8E-43 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AYJ52_10565 53f1caa14c7e98bdd86307a70ff6353d 258 SUPERFAMILY SSF53213 6 258 4.05E-86 T 11-10-2018 AYJ52_10565 53f1caa14c7e98bdd86307a70ff6353d 258 Gene3D G3DSA:3.40.830.10 2 258 3.2E-87 T 11-10-2018 AYJ52_10565 53f1caa14c7e98bdd86307a70ff6353d 258 PIRSF PIRSF006157 1 258 8.0E-84 T 11-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 3.0E-69 T 11-10-2018 AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 SUPERFAMILY SSF51735 4 248 3.56E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.004 T 11-10-2018 AYJ52_10270 799d3e76171ee28bc809b21cbcee88a1 249 Gene3D G3DSA:3.40.50.720 2 249 1.0E-79 T 11-10-2018 AYJ52_13470 9ab6d6c8f68491c56a5dabf454b75192 202 SUPERFAMILY SSF46689 3 74 4.73E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_13470 9ab6d6c8f68491c56a5dabf454b75192 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_13470 9ab6d6c8f68491c56a5dabf454b75192 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_13470 9ab6d6c8f68491c56a5dabf454b75192 202 Gene3D G3DSA:1.10.357.10 2 192 2.5E-17 T 11-10-2018 AYJ52_13470 9ab6d6c8f68491c56a5dabf454b75192 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.3E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_12745 572fa8cd417d8bc150f7afcc28c871f0 305 SUPERFAMILY SSF46785 7 81 1.36E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12745 572fa8cd417d8bc150f7afcc28c871f0 305 Gene3D G3DSA:3.40.190.290 98 302 7.4E-34 T 11-10-2018 AYJ52_12745 572fa8cd417d8bc150f7afcc28c871f0 305 Pfam PF03466 LysR substrate binding domain 97 297 4.3E-30 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12745 572fa8cd417d8bc150f7afcc28c871f0 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 61 2.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12745 572fa8cd417d8bc150f7afcc28c871f0 305 SUPERFAMILY SSF53850 98 295 9.96E-26 T 11-10-2018 AYJ52_12745 572fa8cd417d8bc150f7afcc28c871f0 305 Gene3D G3DSA:1.10.10.10 5 89 3.5E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_18075 0a41e5e30c7f0d3c399409ab7bde8de9 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 83 5.6E-9 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AYJ52_18075 0a41e5e30c7f0d3c399409ab7bde8de9 93 Gene3D G3DSA:3.30.2310.20 1 93 1.9E-26 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AYJ52_18075 0a41e5e30c7f0d3c399409ab7bde8de9 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 83 1.2E-8 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AYJ52_18075 0a41e5e30c7f0d3c399409ab7bde8de9 93 SUPERFAMILY SSF143011 1 83 4.84E-21 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AYJ52_06160 9ae8abed46cb88bf885b9d9fc9527fb9 629 Pfam PF09299 Mu transposase, C-terminal 451 513 4.6E-11 T 11-10-2018 IPR015378 Transposase-like, Mu, C-terminal AYJ52_06160 9ae8abed46cb88bf885b9d9fc9527fb9 629 Pfam PF00665 Integrase core domain 228 363 4.0E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_06160 9ae8abed46cb88bf885b9d9fc9527fb9 629 Pfam PF13518 Helix-turn-helix domain 77 130 5.4E-10 T 11-10-2018 AYJ52_06160 9ae8abed46cb88bf885b9d9fc9527fb9 629 Gene3D G3DSA:3.30.420.10 224 429 2.1E-30 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_06160 9ae8abed46cb88bf885b9d9fc9527fb9 629 SUPERFAMILY SSF53098 221 421 2.15E-22 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_06065 7292695cd7b2efb1a3bde2ceca2a22e1 155 SUPERFAMILY SSF54427 26 129 2.63E-33 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_06065 7292695cd7b2efb1a3bde2ceca2a22e1 155 Pfam PF02810 SEC-C motif 135 152 2.4E-8 T 11-10-2018 IPR004027 SEC-C motif AYJ52_06065 7292695cd7b2efb1a3bde2ceca2a22e1 155 Gene3D G3DSA:3.10.450.50 1 155 4.5E-57 T 11-10-2018 AYJ52_06065 7292695cd7b2efb1a3bde2ceca2a22e1 155 SUPERFAMILY SSF103642 131 154 3.43E-8 T 11-10-2018 AYJ52_19680 89c23e3cae51849c713c436f40323f0e 484 Pfam PF01740 STAS domain 401 481 1.3E-8 T 11-10-2018 IPR002645 STAS domain AYJ52_19680 89c23e3cae51849c713c436f40323f0e 484 SUPERFAMILY SSF52091 400 481 3.14E-11 T 11-10-2018 IPR036513 STAS domain superfamily AYJ52_19680 89c23e3cae51849c713c436f40323f0e 484 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 11-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 AYJ52_19680 89c23e3cae51849c713c436f40323f0e 484 Pfam PF00916 Sulfate permease family 14 356 2.8E-49 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AYJ52_19680 89c23e3cae51849c713c436f40323f0e 484 Gene3D G3DSA:3.30.750.24 388 482 1.6E-27 T 11-10-2018 IPR036513 STAS domain superfamily AYJ52_14625 4e19703a03a309dc8b33a2d88b50b6d0 290 Gene3D G3DSA:3.40.50.720 1 161 9.1E-46 T 11-10-2018 AYJ52_14625 4e19703a03a309dc8b33a2d88b50b6d0 290 PIRSF PIRSF000103 1 290 1.1E-68 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AYJ52_14625 4e19703a03a309dc8b33a2d88b50b6d0 290 Gene3D G3DSA:1.10.1040.10 162 289 3.1E-36 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AYJ52_14625 4e19703a03a309dc8b33a2d88b50b6d0 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 282 2.2E-29 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AYJ52_14625 4e19703a03a309dc8b33a2d88b50b6d0 290 SUPERFAMILY SSF48179 163 289 5.44E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_14625 4e19703a03a309dc8b33a2d88b50b6d0 290 SUPERFAMILY SSF51735 3 162 2.58E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14625 4e19703a03a309dc8b33a2d88b50b6d0 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 9.7E-44 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AYJ52_12515 14ac25b2898bc98e6b27c083eb7c3797 472 SMART SM01236 136 234 1.1E-23 T 11-10-2018 AYJ52_12515 14ac25b2898bc98e6b27c083eb7c3797 472 Pfam PF14518 Iron-containing redox enzyme 105 270 6.3E-29 T 11-10-2018 AYJ52_12515 14ac25b2898bc98e6b27c083eb7c3797 472 Gene3D G3DSA:1.20.910.10 112 277 1.7E-10 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_02595 726612dd94de1bd5e78058e9c0b9bb1d 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 1.3E-44 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02595 726612dd94de1bd5e78058e9c0b9bb1d 146 SUPERFAMILY SSF52080 6 145 3.4E-41 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily AYJ52_02595 726612dd94de1bd5e78058e9c0b9bb1d 146 Gene3D G3DSA:3.100.10.10 73 146 3.5E-13 T 11-10-2018 AYJ52_02595 726612dd94de1bd5e78058e9c0b9bb1d 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02595 726612dd94de1bd5e78058e9c0b9bb1d 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 145 9.7E-27 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P AYJ52_02595 726612dd94de1bd5e78058e9c0b9bb1d 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 146 18.228 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AYJ52_05660 559016a77e484a3a981b96d5674bfd3d 86 SMART SM01294 10 76 2.2E-7 T 11-10-2018 AYJ52_05660 559016a77e484a3a981b96d5674bfd3d 86 Gene3D G3DSA:1.10.1200.10 1 86 2.1E-34 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_05660 559016a77e484a3a981b96d5674bfd3d 86 SUPERFAMILY SSF47336 10 81 3.4E-19 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_05660 559016a77e484a3a981b96d5674bfd3d 86 Pfam PF00550 Phosphopantetheine attachment site 12 76 1.0E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AYJ52_05660 559016a77e484a3a981b96d5674bfd3d 86 SMART SM00823 Phosphopantetheine attachment site 9 80 2.8E-17 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 Pfam PF00330 Aconitase family (aconitate hydratase) 70 534 6.0E-144 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 Pfam PF00694 Aconitase C-terminal domain 657 788 9.0E-31 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 Gene3D G3DSA:1.10.1440.20 563 618 5.4E-9 T 11-10-2018 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 SUPERFAMILY SSF53732 9 592 4.45E-185 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 Gene3D G3DSA:3.20.19.10 619 863 6.0E-84 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 Gene3D G3DSA:3.30.499.10 361 562 4.2E-76 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 PRINTS PR00415 Aconitase family signature 162 170 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 PRINTS PR00415 Aconitase family signature 281 294 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 PRINTS PR00415 Aconitase family signature 205 220 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 PRINTS PR00415 Aconitase family signature 403 414 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 PRINTS PR00415 Aconitase family signature 267 280 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 PRINTS PR00415 Aconitase family signature 191 204 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 PRINTS PR00415 Aconitase family signature 360 374 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 PRINTS PR00415 Aconitase family signature 465 478 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 PRINTS PR00415 Aconitase family signature 138 151 6.8E-27 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 SUPERFAMILY SSF52016 599 862 3.73E-68 T 11-10-2018 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 864 0.0 T 11-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AYJ52_05420 1497ef25af057b435484df6e9eb5e4b5 868 Gene3D G3DSA:3.30.499.20 4 360 1.0E-128 T 11-10-2018 AYJ52_11075 6ff25afa7469ee78d6581a2cb37c0b11 495 Pfam PF00743 Flavin-binding monooxygenase-like 13 346 5.2E-19 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AYJ52_11075 6ff25afa7469ee78d6581a2cb37c0b11 495 SUPERFAMILY SSF51905 284 489 3.88E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11075 6ff25afa7469ee78d6581a2cb37c0b11 495 Gene3D G3DSA:3.50.50.60 298 493 4.8E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11075 6ff25afa7469ee78d6581a2cb37c0b11 495 Gene3D G3DSA:3.50.50.60 1 176 5.5E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11075 6ff25afa7469ee78d6581a2cb37c0b11 495 SUPERFAMILY SSF51905 10 479 1.88E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_16405 6090c80ec82e26f3220a053970eff5f2 239 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 239 90.991 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AYJ52_16405 6090c80ec82e26f3220a053970eff5f2 239 SUPERFAMILY SSF56300 2 213 3.44E-24 T 11-10-2018 AYJ52_16405 6090c80ec82e26f3220a053970eff5f2 239 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 225 1.2E-71 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AYJ52_16405 6090c80ec82e26f3220a053970eff5f2 239 Pfam PF00149 Calcineurin-like phosphoesterase 3 197 1.5E-5 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AYJ52_08160 33e85afe83548081f64e59318fdb1a2d 672 ProDom PD062361 VC1766 YFJM PM0595 590 664 2.0E-10 T 11-10-2018 AYJ52_08160 33e85afe83548081f64e59318fdb1a2d 672 Pfam PF07510 Protein of unknown function (DUF1524) 542 661 8.2E-12 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 AYJ52_08160 33e85afe83548081f64e59318fdb1a2d 672 Pfam PF03235 Protein of unknown function DUF262 13 221 1.6E-31 T 11-10-2018 IPR004919 Domain of unknown function DUF262 AYJ52_13420 4d2ed70b747c5c97d9856ebb4726560d 260 PIRSF PIRSF009320 85 259 5.3E-10 T 11-10-2018 AYJ52_13420 4d2ed70b747c5c97d9856ebb4726560d 260 PIRSF PIRSF009320 2 84 7.5E-16 T 11-10-2018 AYJ52_13420 4d2ed70b747c5c97d9856ebb4726560d 260 SUPERFAMILY SSF52540 1 252 2.3E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13420 4d2ed70b747c5c97d9856ebb4726560d 260 Pfam PF13614 AAA domain 3 177 1.5E-61 T 11-10-2018 IPR025669 AAA domain AYJ52_13420 4d2ed70b747c5c97d9856ebb4726560d 260 Gene3D G3DSA:3.40.50.300 1 259 6.6E-80 T 11-10-2018 AYJ52_05940 8ec6f63fd42e6295c9e8b77b817a5a1f 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AYJ52_05940 8ec6f63fd42e6295c9e8b77b817a5a1f 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 4.7E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05940 8ec6f63fd42e6295c9e8b77b817a5a1f 198 Gene3D G3DSA:1.10.357.10 13 198 4.8E-24 T 11-10-2018 AYJ52_05940 8ec6f63fd42e6295c9e8b77b817a5a1f 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05940 8ec6f63fd42e6295c9e8b77b817a5a1f 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 2.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05940 8ec6f63fd42e6295c9e8b77b817a5a1f 198 SUPERFAMILY SSF46689 2 82 2.99E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_02330 32b1dc09cd93dac5e25f0a6f676c4027 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_02330 32b1dc09cd93dac5e25f0a6f676c4027 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 122 1.7E-29 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_02330 32b1dc09cd93dac5e25f0a6f676c4027 387 SUPERFAMILY SSF47203 231 385 1.21E-46 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_02330 32b1dc09cd93dac5e25f0a6f676c4027 387 Gene3D G3DSA:2.40.110.10 125 238 3.1E-41 T 11-10-2018 AYJ52_02330 32b1dc09cd93dac5e25f0a6f676c4027 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 385 6.9E-47 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_02330 32b1dc09cd93dac5e25f0a6f676c4027 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 221 1.3E-22 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_02330 32b1dc09cd93dac5e25f0a6f676c4027 387 Gene3D G3DSA:1.20.140.10 239 387 8.3E-46 T 11-10-2018 AYJ52_02330 32b1dc09cd93dac5e25f0a6f676c4027 387 SUPERFAMILY SSF56645 6 244 1.57E-78 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_02330 32b1dc09cd93dac5e25f0a6f676c4027 387 Gene3D G3DSA:1.10.540.10 1 124 2.3E-34 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_02840 b3f4eb4c15bdb6c154e542c9ff101814 262 SUPERFAMILY SSF51735 102 259 2.29E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_02840 b3f4eb4c15bdb6c154e542c9ff101814 262 SUPERFAMILY SSF53223 2 101 1.27E-31 T 11-10-2018 AYJ52_02840 b3f4eb4c15bdb6c154e542c9ff101814 262 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 259 1.4E-77 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AYJ52_02840 b3f4eb4c15bdb6c154e542c9ff101814 262 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 113 194 1.7E-13 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AYJ52_02840 b3f4eb4c15bdb6c154e542c9ff101814 262 Gene3D G3DSA:3.40.50.10860 5 253 5.4E-78 T 11-10-2018 AYJ52_02840 b3f4eb4c15bdb6c154e542c9ff101814 262 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 260 29.786 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AYJ52_02840 b3f4eb4c15bdb6c154e542c9ff101814 262 Gene3D G3DSA:3.40.50.720 115 234 5.4E-78 T 11-10-2018 AYJ52_02840 b3f4eb4c15bdb6c154e542c9ff101814 262 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 1.5E-23 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AYJ52_17165 c349c11dd68e8fcbfad6a09541def5d4 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_17165 c349c11dd68e8fcbfad6a09541def5d4 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.2E-24 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17165 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17165 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17165 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17165 c349c11dd68e8fcbfad6a09541def5d4 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17165 c349c11dd68e8fcbfad6a09541def5d4 71 Gene3D G3DSA:1.20.5.1150 16 54 1.2E-20 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17165 c349c11dd68e8fcbfad6a09541def5d4 71 Pfam PF01165 Ribosomal protein S21 3 55 4.1E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17165 c349c11dd68e8fcbfad6a09541def5d4 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 5.0E-10 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17165 c349c11dd68e8fcbfad6a09541def5d4 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.252 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_06910 8d4493934ab2d9750c8ff7618b447b94 133 Gene3D G3DSA:3.30.300.20 2 111 6.5E-36 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_06910 8d4493934ab2d9750c8ff7618b447b94 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 117 24.898 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AYJ52_06910 8d4493934ab2d9750c8ff7618b447b94 133 SUPERFAMILY SSF89919 1 119 2.09E-31 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily AYJ52_06910 8d4493934ab2d9750c8ff7618b447b94 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 104 2.0E-50 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AYJ52_06910 8d4493934ab2d9750c8ff7618b447b94 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 120 6.3E-26 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AYJ52_06910 8d4493934ab2d9750c8ff7618b447b94 133 Pfam PF02033 Ribosome-binding factor A 6 114 1.7E-30 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 SUPERFAMILY SSF56634 21 544 8.37E-223 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 Gene3D G3DSA:3.40.50.880 561 712 5.2E-28 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 PIRSF PIRSF038927 6 710 0.0 T 11-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 Pfam PF06628 Catalase-related immune-responsive 462 527 2.4E-19 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 Gene3D G3DSA:2.40.180.10 2 457 1.9E-214 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 Gene3D G3DSA:1.20.1370.20 460 560 5.5E-34 T 11-10-2018 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 SUPERFAMILY SSF52317 559 707 1.37E-10 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 SMART SM01060 45 433 2.3E-270 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 Pfam PF00199 Catalase 45 430 1.4E-178 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 375 383 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 PRINTS PR00067 Catalase signature 58 81 9.7E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 PRINTS PR00067 Catalase signature 330 357 9.7E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 PRINTS PR00067 Catalase signature 362 388 9.7E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 PRINTS PR00067 Catalase signature 161 179 9.7E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 PRINTS PR00067 Catalase signature 121 139 9.7E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_12520 18baf74c9d2065d4c39c06545d2cfd7c 712 PRINTS PR00067 Catalase signature 142 159 9.7E-69 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_04805 b80bff5527f4757681584797a7b29996 434 Pfam PF01029 NusB family 13 130 8.0E-16 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AYJ52_04805 b80bff5527f4757681584797a7b29996 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 6.2E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AYJ52_04805 b80bff5527f4757681584797a7b29996 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 6.2E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AYJ52_04805 b80bff5527f4757681584797a7b29996 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 6.2E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AYJ52_04805 b80bff5527f4757681584797a7b29996 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 6.2E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AYJ52_04805 b80bff5527f4757681584797a7b29996 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 415 432 6.2E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AYJ52_04805 b80bff5527f4757681584797a7b29996 434 Gene3D G3DSA:1.10.940.10 8 144 1.4E-32 T 11-10-2018 IPR035926 NusB-like superfamily AYJ52_04805 b80bff5527f4757681584797a7b29996 434 Gene3D G3DSA:3.30.70.1170 173 230 1.3E-15 T 11-10-2018 AYJ52_04805 b80bff5527f4757681584797a7b29996 434 Gene3D G3DSA:3.40.50.150 231 433 1.5E-54 T 11-10-2018 AYJ52_04805 b80bff5527f4757681584797a7b29996 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 430 3.7E-54 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AYJ52_04805 b80bff5527f4757681584797a7b29996 434 SUPERFAMILY SSF53335 141 433 2.92E-66 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_04805 b80bff5527f4757681584797a7b29996 434 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 17 432 1.6E-110 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 AYJ52_04805 b80bff5527f4757681584797a7b29996 434 SUPERFAMILY SSF48013 12 149 3.11E-26 T 11-10-2018 IPR035926 NusB-like superfamily AYJ52_17805 59e384a6a2e1d151978c8ef77850495e 357 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AYJ52_17805 59e384a6a2e1d151978c8ef77850495e 357 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 350 8.4E-135 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AYJ52_17805 59e384a6a2e1d151978c8ef77850495e 357 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AYJ52_17805 59e384a6a2e1d151978c8ef77850495e 357 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 352 48.792 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AYJ52_17805 59e384a6a2e1d151978c8ef77850495e 357 Gene3D G3DSA:3.20.20.210 1 357 1.8E-164 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AYJ52_17805 59e384a6a2e1d151978c8ef77850495e 357 SUPERFAMILY SSF51726 1 355 9.94E-116 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AYJ52_17805 59e384a6a2e1d151978c8ef77850495e 357 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 351 2.1E-137 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AYJ52_07745 6c2e6412abb6c5d1eefa745a77b4b0f0 232 PIRSF PIRSF006170 1 217 3.3E-64 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 AYJ52_07745 6c2e6412abb6c5d1eefa745a77b4b0f0 232 SUPERFAMILY SSF48452 93 192 1.55E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_07745 6c2e6412abb6c5d1eefa745a77b4b0f0 232 Pfam PF09976 Tetratricopeptide repeat-like domain 13 212 2.3E-44 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AYJ52_07745 6c2e6412abb6c5d1eefa745a77b4b0f0 232 Gene3D G3DSA:1.25.40.10 45 197 9.3E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 Gene3D G3DSA:3.40.50.80 136 264 6.3E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 Gene3D G3DSA:2.40.30.10 35 135 1.1E-14 T 11-10-2018 AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 SUPERFAMILY SSF54292 255 356 3.54E-14 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 SUPERFAMILY SSF52343 130 251 3.27E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 SUPERFAMILY SSF63380 31 134 1.32E-17 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 Pfam PF00970 Oxidoreductase FAD-binding domain 43 134 9.0E-9 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 Pfam PF00175 Oxidoreductase NAD-binding domain 145 246 9.3E-14 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 PRINTS PR00406 Cytochrome B5 reductase signature 144 163 1.6E-5 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 PRINTS PR00406 Cytochrome B5 reductase signature 122 136 1.6E-5 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 PRINTS PR00406 Cytochrome B5 reductase signature 232 240 1.6E-5 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AYJ52_18310 ee0c414b8c60b28647f6e9c02649529a 356 Gene3D G3DSA:3.10.20.30 265 356 3.1E-13 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_16430 2400b851aa2fb5e29f1ef5009a9d87f1 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 307 29.059 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AYJ52_16430 2400b851aa2fb5e29f1ef5009a9d87f1 314 SUPERFAMILY SSF52540 8 157 4.26E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16430 2400b851aa2fb5e29f1ef5009a9d87f1 314 Gene3D G3DSA:1.10.20.140 114 186 2.5E-93 T 11-10-2018 AYJ52_16430 2400b851aa2fb5e29f1ef5009a9d87f1 314 Pfam PF01715 IPP transferase 41 293 1.6E-78 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AYJ52_16430 2400b851aa2fb5e29f1ef5009a9d87f1 314 Gene3D G3DSA:3.40.50.300 11 296 2.5E-93 T 11-10-2018 AYJ52_16430 2400b851aa2fb5e29f1ef5009a9d87f1 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 296 9.3E-91 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AYJ52_08890 d8f479cd6f3016d6fc223339199286b6 406 Gene3D G3DSA:1.20.140.10 253 406 1.8E-39 T 11-10-2018 AYJ52_08890 d8f479cd6f3016d6fc223339199286b6 406 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 357 376 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_08890 d8f479cd6f3016d6fc223339199286b6 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 27 139 5.9E-35 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_08890 d8f479cd6f3016d6fc223339199286b6 406 Gene3D G3DSA:2.40.110.10 142 251 2.3E-37 T 11-10-2018 AYJ52_08890 d8f479cd6f3016d6fc223339199286b6 406 Gene3D G3DSA:1.10.540.10 9 141 4.2E-43 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_08890 d8f479cd6f3016d6fc223339199286b6 406 SUPERFAMILY SSF47203 251 400 1.16E-40 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_08890 d8f479cd6f3016d6fc223339199286b6 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 143 239 3.3E-21 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_08890 d8f479cd6f3016d6fc223339199286b6 406 SUPERFAMILY SSF56645 14 250 6.41E-79 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_08890 d8f479cd6f3016d6fc223339199286b6 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 397 7.7E-27 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_03990 98b63fad0c3bdb15d3c989a33eb40fa3 245 SUPERFAMILY SSF52218 7 181 9.16E-32 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_03990 98b63fad0c3bdb15d3c989a33eb40fa3 245 Pfam PF03358 NADPH-dependent FMN reductase 11 155 1.8E-31 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AYJ52_03990 98b63fad0c3bdb15d3c989a33eb40fa3 245 Gene3D G3DSA:3.40.50.360 5 183 1.8E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_03990 98b63fad0c3bdb15d3c989a33eb40fa3 245 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 11 183 1.2E-71 T 11-10-2018 IPR019912 FMN reductase, MsuE-like AYJ52_08640 e16f6fff2334e4f7a97f27fd459fa462 145 Pfam PF01047 MarR family 38 96 3.1E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_08640 e16f6fff2334e4f7a97f27fd459fa462 145 Gene3D G3DSA:1.10.10.10 1 144 1.2E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_08640 e16f6fff2334e4f7a97f27fd459fa462 145 SMART SM00347 31 131 1.1E-22 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_08640 e16f6fff2334e4f7a97f27fd459fa462 145 SUPERFAMILY SSF46785 7 143 2.25E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_06585 4731d18a5c8ff89fc97934a0660c3cab 497 Gene3D G3DSA:3.60.120.10 1 494 2.0E-175 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AYJ52_06585 4731d18a5c8ff89fc97934a0660c3cab 497 Pfam PF00425 chorismate binding enzyme 221 480 4.7E-92 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AYJ52_06585 4731d18a5c8ff89fc97934a0660c3cab 497 SUPERFAMILY SSF56322 15 490 1.1E-152 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AYJ52_06585 4731d18a5c8ff89fc97934a0660c3cab 497 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 488 3.3E-162 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AYJ52_06585 4731d18a5c8ff89fc97934a0660c3cab 497 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 173 1.1E-36 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AYJ52_06585 4731d18a5c8ff89fc97934a0660c3cab 497 PRINTS PR00095 Anthranilate synthase component I signature 422 436 2.3E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AYJ52_06585 4731d18a5c8ff89fc97934a0660c3cab 497 PRINTS PR00095 Anthranilate synthase component I signature 328 341 2.3E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AYJ52_06585 4731d18a5c8ff89fc97934a0660c3cab 497 PRINTS PR00095 Anthranilate synthase component I signature 437 451 2.3E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AYJ52_06585 4731d18a5c8ff89fc97934a0660c3cab 497 PRINTS PR00095 Anthranilate synthase component I signature 342 355 2.3E-23 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AYJ52_07750 838a90343b6b7845c456f38558059c98 381 SUPERFAMILY SSF50998 61 366 1.22E-56 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AYJ52_07750 838a90343b6b7845c456f38558059c98 381 SMART SM00564 143 175 0.09 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_07750 838a90343b6b7845c456f38558059c98 381 SMART SM00564 189 221 24.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_07750 838a90343b6b7845c456f38558059c98 381 SMART SM00564 279 310 2.0E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_07750 838a90343b6b7845c456f38558059c98 381 SMART SM00564 103 135 6.9E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_07750 838a90343b6b7845c456f38558059c98 381 SMART SM00564 241 272 220.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_07750 838a90343b6b7845c456f38558059c98 381 SMART SM00564 320 351 1.1 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_07750 838a90343b6b7845c456f38558059c98 381 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 380 26.701 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB AYJ52_07750 838a90343b6b7845c456f38558059c98 381 Pfam PF13360 PQQ-like domain 78 309 6.9E-38 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AYJ52_07750 838a90343b6b7845c456f38558059c98 381 Gene3D G3DSA:2.130.10.10 46 380 1.2E-77 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AYJ52_07750 838a90343b6b7845c456f38558059c98 381 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 379 7.8E-108 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB AYJ52_13800 8909cab9ed6a2edd691ae03b55023693 172 SUPERFAMILY SSF52540 3 169 7.19E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13800 8909cab9ed6a2edd691ae03b55023693 172 Gene3D G3DSA:3.40.50.300 2 169 2.3E-54 T 11-10-2018 AYJ52_13800 8909cab9ed6a2edd691ae03b55023693 172 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 166 2.1E-58 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 AYJ52_13800 8909cab9ed6a2edd691ae03b55023693 172 PIRSF PIRSF006135 1 171 8.5E-56 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 14 118 5.2E-31 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 159 4.5E-11 T 11-10-2018 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 381 4.5E-11 T 11-10-2018 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 304 4.5E-11 T 11-10-2018 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 413 4.5E-11 T 11-10-2018 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 Gene3D G3DSA:3.50.50.60 247 373 2.1E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 137 415 6.3E-57 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 SUPERFAMILY SSF51905 276 440 6.29E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 Gene3D G3DSA:2.102.10.10 9 121 4.3E-35 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 252 4.3E-18 T 11-10-2018 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 391 413 4.3E-18 T 11-10-2018 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 366 382 4.3E-18 T 11-10-2018 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 157 4.3E-18 T 11-10-2018 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 297 4.3E-18 T 11-10-2018 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 Pfam PF13806 Rieske-like [2Fe-2S] domain 14 118 5.4E-38 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 Gene3D G3DSA:3.50.50.60 139 422 2.1E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 Gene3D G3DSA:3.30.390.30 450 512 1.3E-6 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 SUPERFAMILY SSF51905 135 324 1.13E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15875 402265361c1707cec6b2e4ac33e30362 540 SUPERFAMILY SSF50022 14 123 2.62E-35 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_02660 4f99c9929640c2c32fbb044f1a1e8cd6 250 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.232 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AYJ52_02660 4f99c9929640c2c32fbb044f1a1e8cd6 250 SUPERFAMILY SSF54821 108 206 1.57E-40 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02660 4f99c9929640c2c32fbb044f1a1e8cd6 250 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 4.2E-95 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AYJ52_02660 4f99c9929640c2c32fbb044f1a1e8cd6 250 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-41 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02660 4f99c9929640c2c32fbb044f1a1e8cd6 250 SUPERFAMILY SSF54814 2 106 1.88E-35 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AYJ52_02660 4f99c9929640c2c32fbb044f1a1e8cd6 250 Pfam PF07650 KH domain 39 110 9.2E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02660 4f99c9929640c2c32fbb044f1a1e8cd6 250 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02660 4f99c9929640c2c32fbb044f1a1e8cd6 250 SMART SM00322 60 125 4.5E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AYJ52_02660 4f99c9929640c2c32fbb044f1a1e8cd6 250 Gene3D G3DSA:3.30.300.20 18 107 4.2E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_02660 4f99c9929640c2c32fbb044f1a1e8cd6 250 Gene3D G3DSA:3.30.1140.32 108 208 3.7E-45 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_03095 305005ab13233fec194dc4705b9d5789 122 Pfam PF01245 Ribosomal protein L19 7 116 5.9E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03095 305005ab13233fec194dc4705b9d5789 122 PRINTS PR00061 Ribosomal protein L19 signature 37 66 2.9E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03095 305005ab13233fec194dc4705b9d5789 122 PRINTS PR00061 Ribosomal protein L19 signature 7 36 2.9E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03095 305005ab13233fec194dc4705b9d5789 122 PRINTS PR00061 Ribosomal protein L19 signature 91 116 2.9E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03095 305005ab13233fec194dc4705b9d5789 122 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 5 117 30.776 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03095 305005ab13233fec194dc4705b9d5789 122 PIRSF PIRSF002191 1 122 1.9E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03095 305005ab13233fec194dc4705b9d5789 122 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_03095 305005ab13233fec194dc4705b9d5789 122 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 116 3.6E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03095 305005ab13233fec194dc4705b9d5789 122 SUPERFAMILY SSF50104 6 118 5.62E-47 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AYJ52_03095 305005ab13233fec194dc4705b9d5789 122 Gene3D G3DSA:2.30.30.790 12 121 9.3E-16 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_01850 d552c80076e0070eb6661e255fb253cc 390 Pfam PF00487 Fatty acid desaturase 42 263 1.7E-20 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AYJ52_01850 d552c80076e0070eb6661e255fb253cc 390 PIRSF PIRSF000345 1 330 5.5E-95 T 11-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 AYJ52_01850 d552c80076e0070eb6661e255fb253cc 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 39 61 9.3E-36 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AYJ52_01850 d552c80076e0070eb6661e255fb253cc 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 100 129 9.3E-36 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AYJ52_01850 d552c80076e0070eb6661e255fb253cc 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 232 246 9.3E-36 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AYJ52_01850 d552c80076e0070eb6661e255fb253cc 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 62 82 9.3E-36 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AYJ52_01850 d552c80076e0070eb6661e255fb253cc 390 PRINTS PR00075 Fatty acid desaturase family 1 signature 189 210 9.3E-36 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AYJ52_14095 3bf95d60f43f9ceae36b35d4bb47b6ed 734 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 717 734 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AYJ52_14095 3bf95d60f43f9ceae36b35d4bb47b6ed 734 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 80 734 6.6E-121 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_14095 3bf95d60f43f9ceae36b35d4bb47b6ed 734 Pfam PF00593 TonB dependent receptor 270 732 5.1E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_14095 3bf95d60f43f9ceae36b35d4bb47b6ed 734 Gene3D G3DSA:2.170.130.10 57 187 3.7E-22 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_14095 3bf95d60f43f9ceae36b35d4bb47b6ed 734 Gene3D G3DSA:2.40.170.20 188 734 3.9E-83 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_14095 3bf95d60f43f9ceae36b35d4bb47b6ed 734 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 177 9.0E-10 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_14095 3bf95d60f43f9ceae36b35d4bb47b6ed 734 SUPERFAMILY SSF56935 41 734 3.89E-100 T 11-10-2018 AYJ52_16995 3d8d68fd1ece5feb1a4eec586b9f8230 133 SMART SM00095 19 133 5.7E-4 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_16995 3d8d68fd1ece5feb1a4eec586b9f8230 133 ProSitePatterns PS00769 Transthyretin signature 2. 116 128 - T 11-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_16995 3d8d68fd1ece5feb1a4eec586b9f8230 133 PRINTS PR00189 Transthyretin signature 23 43 7.9E-10 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_16995 3d8d68fd1ece5feb1a4eec586b9f8230 133 PRINTS PR00189 Transthyretin signature 55 80 7.9E-10 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_16995 3d8d68fd1ece5feb1a4eec586b9f8230 133 PRINTS PR00189 Transthyretin signature 111 133 7.9E-10 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_16995 3d8d68fd1ece5feb1a4eec586b9f8230 133 Pfam PF00576 HIUase/Transthyretin family 24 132 6.5E-37 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_16995 3d8d68fd1ece5feb1a4eec586b9f8230 133 SUPERFAMILY SSF49472 19 133 1.31E-38 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_16995 3d8d68fd1ece5feb1a4eec586b9f8230 133 Gene3D G3DSA:2.60.40.180 19 133 2.5E-39 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_16995 3d8d68fd1ece5feb1a4eec586b9f8230 133 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 22 132 6.5E-42 T 11-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AYJ52_10580 2120fcf5e519b7f46d0a289d2b2c097b 194 PIRSF PIRSF006806 1 189 1.1E-34 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AYJ52_10580 2120fcf5e519b7f46d0a289d2b2c097b 194 SUPERFAMILY SSF100950 6 193 2.09E-44 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_10580 2120fcf5e519b7f46d0a289d2b2c097b 194 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 185 2.3E-42 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AYJ52_10580 2120fcf5e519b7f46d0a289d2b2c097b 194 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 185 1.6E-33 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AYJ52_10580 2120fcf5e519b7f46d0a289d2b2c097b 194 Gene3D G3DSA:3.40.50.10420 5 194 2.1E-46 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AYJ52_11665 71cf56e84d0c1bffa63ea88995a9f863 182 Gene3D G3DSA:2.60.450.10 34 175 3.7E-41 T 11-10-2018 AYJ52_11665 71cf56e84d0c1bffa63ea88995a9f863 182 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 32 171 1.4E-38 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AYJ52_11665 71cf56e84d0c1bffa63ea88995a9f863 182 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 12 172 23.041 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AYJ52_11665 71cf56e84d0c1bffa63ea88995a9f863 182 Pfam PF03968 OstA-like protein 44 153 4.4E-26 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 Gene3D G3DSA:1.10.3860.10 2 418 1.5E-117 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 1.0E-23 T 11-10-2018 AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 1.0E-23 T 11-10-2018 AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 1.0E-23 T 11-10-2018 AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 1.0E-23 T 11-10-2018 AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 1.0E-23 T 11-10-2018 AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 1.0E-23 T 11-10-2018 AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 Pfam PF00375 Sodium:dicarboxylate symporter family 9 403 2.4E-103 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 SUPERFAMILY SSF118215 9 404 1.44E-112 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_10105 c3a21ad7b75701c825642413da2f29c5 420 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AYJ52_13035 3a393b2ddabce1846cd7bf19e073f8e4 470 Gene3D G3DSA:3.20.20.30 5 457 2.1E-141 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AYJ52_13035 3a393b2ddabce1846cd7bf19e073f8e4 470 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 11 434 3.2E-156 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AYJ52_13035 3a393b2ddabce1846cd7bf19e073f8e4 470 SUPERFAMILY SSF51679 8 437 1.03E-119 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AYJ52_13035 3a393b2ddabce1846cd7bf19e073f8e4 470 PIRSF PIRSF000337 6 448 3.7E-130 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AYJ52_13035 3a393b2ddabce1846cd7bf19e073f8e4 470 Pfam PF00296 Luciferase-like monooxygenase 31 384 1.7E-58 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AYJ52_06575 a869de2c8444ff726f68921cfe0999d4 208 SMART SM00240 22 72 1.5E-11 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AYJ52_06575 a869de2c8444ff726f68921cfe0999d4 208 Gene3D G3DSA:2.60.200.20 1 103 1.3E-25 T 11-10-2018 AYJ52_06575 a869de2c8444ff726f68921cfe0999d4 208 Pfam PF00498 FHA domain 24 86 9.8E-19 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AYJ52_06575 a869de2c8444ff726f68921cfe0999d4 208 SUPERFAMILY SSF49879 2 101 1.13E-24 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AYJ52_05185 56e92b061ec4fa7db3be0ecf3985c92c 327 SUPERFAMILY SSF53850 41 274 7.08E-51 T 11-10-2018 AYJ52_05185 56e92b061ec4fa7db3be0ecf3985c92c 327 Gene3D G3DSA:1.10.8.450 252 286 2.7E-108 T 11-10-2018 AYJ52_05185 56e92b061ec4fa7db3be0ecf3985c92c 327 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 43 325 2.9E-78 T 11-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AYJ52_05185 56e92b061ec4fa7db3be0ecf3985c92c 327 SMART SM00062 42 257 1.7E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_05185 56e92b061ec4fa7db3be0ecf3985c92c 327 Gene3D G3DSA:3.40.190.10 121 220 2.7E-108 T 11-10-2018 AYJ52_05185 56e92b061ec4fa7db3be0ecf3985c92c 327 Gene3D G3DSA:3.40.190.10 43 317 2.7E-108 T 11-10-2018 AYJ52_05185 56e92b061ec4fa7db3be0ecf3985c92c 327 Pfam PF13379 NMT1-like family 39 263 8.8E-19 T 11-10-2018 AYJ52_13965 82fd6c7add116150e2135774c4509221 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 386 9.7E-49 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_13965 82fd6c7add116150e2135774c4509221 401 Gene3D G3DSA:3.40.50.1100 62 391 2.3E-172 T 11-10-2018 AYJ52_13965 82fd6c7add116150e2135774c4509221 401 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_13965 82fd6c7add116150e2135774c4509221 401 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 10 399 48.963 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_13965 82fd6c7add116150e2135774c4509221 401 PIRSF PIRSF001413 2 401 6.7E-161 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_13965 82fd6c7add116150e2135774c4509221 401 Gene3D G3DSA:3.40.50.1100 18 214 2.3E-172 T 11-10-2018 AYJ52_13965 82fd6c7add116150e2135774c4509221 401 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 15 398 1.6E-167 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_13965 82fd6c7add116150e2135774c4509221 401 SUPERFAMILY SSF53686 11 397 2.62E-135 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_04490 2f9494d9f68a09b0adb59990f2ba7b0b 353 Pfam PF14462 Prokaryotic E2 family E 230 348 2.2E-35 T 11-10-2018 IPR025701 Ubiquitin-conjugating enzyme, E2, family E AYJ52_07105 ff6644237a3221b686058adcab4e0f5d 570 SUPERFAMILY SSF54373 215 311 6.67E-33 T 11-10-2018 AYJ52_07105 ff6644237a3221b686058adcab4e0f5d 570 Gene3D G3DSA:3.30.9.90 83 470 2.6E-191 T 11-10-2018 AYJ52_07105 ff6644237a3221b686058adcab4e0f5d 570 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 466 567 1.7E-50 T 11-10-2018 AYJ52_07105 ff6644237a3221b686058adcab4e0f5d 570 SUPERFAMILY SSF51905 6 437 1.84E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_07105 ff6644237a3221b686058adcab4e0f5d 570 SUPERFAMILY SSF54862 470 570 1.24E-29 T 11-10-2018 AYJ52_07105 ff6644237a3221b686058adcab4e0f5d 570 Gene3D G3DSA:3.50.50.60 10 407 2.6E-191 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_07105 ff6644237a3221b686058adcab4e0f5d 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 1.4E-6 T 11-10-2018 AYJ52_07105 ff6644237a3221b686058adcab4e0f5d 570 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 183 198 1.4E-6 T 11-10-2018 AYJ52_07105 ff6644237a3221b686058adcab4e0f5d 570 Gene3D G3DSA:3.30.70.20 471 565 3.9E-37 T 11-10-2018 AYJ52_07105 ff6644237a3221b686058adcab4e0f5d 570 Pfam PF01946 Thi4 family 8 59 8.7E-7 T 11-10-2018 AYJ52_02245 e03d49e728afc4359e3591eb32e7e11a 217 SUPERFAMILY SSF47616 90 207 1.56E-16 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_02245 e03d49e728afc4359e3591eb32e7e11a 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 11 78 6.2E-12 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_02245 e03d49e728afc4359e3591eb32e7e11a 217 SUPERFAMILY SSF52833 6 87 3.17E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_02245 e03d49e728afc4359e3591eb32e7e11a 217 Gene3D G3DSA:3.40.30.10 11 203 3.3E-59 T 11-10-2018 AYJ52_02245 e03d49e728afc4359e3591eb32e7e11a 217 Gene3D G3DSA:1.20.1050.10 87 195 3.3E-59 T 11-10-2018 AYJ52_01795 58db12e4b23cc9f254dcb597f0494048 267 SUPERFAMILY SSF51366 1 243 1.04E-88 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AYJ52_01795 58db12e4b23cc9f254dcb597f0494048 267 Pfam PF00290 Tryptophan synthase alpha chain 8 260 2.0E-86 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_01795 58db12e4b23cc9f254dcb597f0494048 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 8.3E-76 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_01795 58db12e4b23cc9f254dcb597f0494048 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 33.662 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_01795 58db12e4b23cc9f254dcb597f0494048 267 Gene3D G3DSA:3.20.20.70 1 267 4.0E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_01795 58db12e4b23cc9f254dcb597f0494048 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_13985 2f86d0d4c4c0333959a8e11cfdb84a61 409 Pfam PF00990 Diguanylate cyclase, GGDEF domain 235 395 6.0E-50 T 11-10-2018 IPR000160 GGDEF domain AYJ52_13985 2f86d0d4c4c0333959a8e11cfdb84a61 409 Gene3D G3DSA:3.30.70.270 220 400 6.3E-57 T 11-10-2018 AYJ52_13985 2f86d0d4c4c0333959a8e11cfdb84a61 409 SMART SM00267 223 399 8.9E-66 T 11-10-2018 IPR000160 GGDEF domain AYJ52_13985 2f86d0d4c4c0333959a8e11cfdb84a61 409 SUPERFAMILY SSF55073 239 397 4.91E-49 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_13985 2f86d0d4c4c0333959a8e11cfdb84a61 409 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 232 398 4.1E-52 T 11-10-2018 IPR000160 GGDEF domain AYJ52_10300 b3ca9af5d9ec58f7fbfb41c97bfcdd3c 543 Pfam PF01384 Phosphate transporter family 83 532 2.9E-84 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AYJ52_01575 631dda7f128f69477f95069476d00cb9 240 Gene3D G3DSA:2.40.30.160 124 228 2.5E-19 T 11-10-2018 AYJ52_01575 631dda7f128f69477f95069476d00cb9 240 SUPERFAMILY SSF103025 8 167 1.35E-34 T 11-10-2018 AYJ52_01575 631dda7f128f69477f95069476d00cb9 240 Gene3D G3DSA:3.30.70.1400 9 92 5.1E-20 T 11-10-2018 AYJ52_01575 631dda7f128f69477f95069476d00cb9 240 Pfam PF01571 Aminomethyltransferase folate-binding domain 6 83 1.3E-7 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AYJ52_01575 631dda7f128f69477f95069476d00cb9 240 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 115 179 7.6E-22 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site AYJ52_01575 631dda7f128f69477f95069476d00cb9 240 PIRSF PIRSF006487 60 213 23.0 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AYJ52_01575 631dda7f128f69477f95069476d00cb9 240 PIRSF PIRSF006487 3 96 3.9E-6 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AYJ52_00420 cab8e2ceca448bf4333ee619799fd089 491 Gene3D G3DSA:1.10.287.470 229 298 5.6E-52 T 11-10-2018 AYJ52_00420 cab8e2ceca448bf4333ee619799fd089 491 Gene3D G3DSA:2.40.50.100 195 332 5.6E-52 T 11-10-2018 AYJ52_00420 cab8e2ceca448bf4333ee619799fd089 491 Gene3D G3DSA:2.40.420.20 173 467 5.6E-52 T 11-10-2018 AYJ52_00420 cab8e2ceca448bf4333ee619799fd089 491 Gene3D G3DSA:2.40.30.170 181 413 5.6E-52 T 11-10-2018 AYJ52_00420 cab8e2ceca448bf4333ee619799fd089 491 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 172 468 2.4E-36 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_00420 cab8e2ceca448bf4333ee619799fd089 491 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 179 397 1.3E-24 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_00420 cab8e2ceca448bf4333ee619799fd089 491 SUPERFAMILY SSF111369 198 397 1.16E-8 T 11-10-2018 AYJ52_08880 47c7209e62ba2bf180008eededd76893 391 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 102 7.2E-11 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AYJ52_08880 47c7209e62ba2bf180008eededd76893 391 SUPERFAMILY SSF51735 141 342 4.68E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_08880 47c7209e62ba2bf180008eededd76893 391 SUPERFAMILY SSF50129 10 174 2.04E-28 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_08880 47c7209e62ba2bf180008eededd76893 391 Pfam PF00107 Zinc-binding dehydrogenase 175 340 2.6E-13 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AYJ52_02305 98a07da2ea24f5c41be257cee07d07f2 385 SUPERFAMILY SSF56645 3 241 2.09E-75 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_02305 98a07da2ea24f5c41be257cee07d07f2 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 4.4E-32 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_02305 98a07da2ea24f5c41be257cee07d07f2 385 Gene3D G3DSA:1.20.140.10 234 377 1.7E-39 T 11-10-2018 AYJ52_02305 98a07da2ea24f5c41be257cee07d07f2 385 Gene3D G3DSA:1.10.540.10 1 120 1.4E-38 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_02305 98a07da2ea24f5c41be257cee07d07f2 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_02305 98a07da2ea24f5c41be257cee07d07f2 385 Gene3D G3DSA:2.40.110.10 121 233 7.3E-40 T 11-10-2018 AYJ52_02305 98a07da2ea24f5c41be257cee07d07f2 385 SUPERFAMILY SSF47203 229 377 7.41E-42 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_02305 98a07da2ea24f5c41be257cee07d07f2 385 PIRSF PIRSF016578 3 361 1.2E-15 T 11-10-2018 AYJ52_02305 98a07da2ea24f5c41be257cee07d07f2 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 2.3E-23 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_02305 98a07da2ea24f5c41be257cee07d07f2 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 1.3E-39 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_14080 3f5302ff7db7ae74a26af66c071c3dec 202 SUPERFAMILY SSF52218 1 201 4.51E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_14080 3f5302ff7db7ae74a26af66c071c3dec 202 Gene3D G3DSA:3.40.50.360 1 201 5.1E-56 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_14080 3f5302ff7db7ae74a26af66c071c3dec 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 201 31.397 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AYJ52_14080 3f5302ff7db7ae74a26af66c071c3dec 202 Pfam PF02525 Flavodoxin-like fold 1 199 4.1E-44 T 11-10-2018 IPR003680 Flavodoxin-like fold AYJ52_14335 5a3fc8bf8d96af29b7ad5fdfcfc980b6 243 Gene3D G3DSA:1.10.10.10 141 243 4.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14335 5a3fc8bf8d96af29b7ad5fdfcfc980b6 243 Gene3D G3DSA:3.40.50.2300 7 140 4.2E-39 T 11-10-2018 AYJ52_14335 5a3fc8bf8d96af29b7ad5fdfcfc980b6 243 SUPERFAMILY SSF52172 7 140 2.7E-42 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_14335 5a3fc8bf8d96af29b7ad5fdfcfc980b6 243 SMART SM00862 163 237 7.8E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_14335 5a3fc8bf8d96af29b7ad5fdfcfc980b6 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 237 2.9E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_14335 5a3fc8bf8d96af29b7ad5fdfcfc980b6 243 SUPERFAMILY SSF46894 134 238 3.12E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_14335 5a3fc8bf8d96af29b7ad5fdfcfc980b6 243 SMART SM00448 13 123 1.0E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_14335 5a3fc8bf8d96af29b7ad5fdfcfc980b6 243 Pfam PF00072 Response regulator receiver domain 15 123 1.5E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_07830 fa3dd21e9d92acb976dc0b56d890d586 400 SUPERFAMILY SSF53901 213 397 2.27E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_07830 fa3dd21e9d92acb976dc0b56d890d586 400 Gene3D G3DSA:3.40.47.10 249 395 6.2E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_07830 fa3dd21e9d92acb976dc0b56d890d586 400 Gene3D G3DSA:3.40.47.10 24 244 2.5E-28 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_07830 fa3dd21e9d92acb976dc0b56d890d586 400 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 78 240 6.5E-21 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AYJ52_07830 fa3dd21e9d92acb976dc0b56d890d586 400 SMART SM00825 Beta-ketoacyl synthase 73 396 3.5E-6 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AYJ52_07830 fa3dd21e9d92acb976dc0b56d890d586 400 SUPERFAMILY SSF53901 23 240 1.02E-31 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_07830 fa3dd21e9d92acb976dc0b56d890d586 400 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 246 351 1.1E-27 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AYJ52_07830 fa3dd21e9d92acb976dc0b56d890d586 400 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 158 174 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AYJ52_01095 e45cb23523d4513d681b2310aa855606 441 Pfam PF13356 Arm DNA-binding domain 8 89 2.7E-15 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AYJ52_01095 e45cb23523d4513d681b2310aa855606 441 Gene3D G3DSA:1.10.150.130 93 212 7.8E-27 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AYJ52_01095 e45cb23523d4513d681b2310aa855606 441 SUPERFAMILY SSF56349 104 401 1.47E-47 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AYJ52_01095 e45cb23523d4513d681b2310aa855606 441 Gene3D G3DSA:3.30.160.390 6 92 1.0E-26 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AYJ52_01095 e45cb23523d4513d681b2310aa855606 441 Pfam PF00589 Phage integrase family 235 392 3.3E-17 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AYJ52_01095 e45cb23523d4513d681b2310aa855606 441 Gene3D G3DSA:1.10.443.10 217 404 5.0E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AYJ52_14640 3034b894ef1f7c3619bef13db052f05f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 3.4E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14640 3034b894ef1f7c3619bef13db052f05f 311 Gene3D G3DSA:3.40.190.10 178 280 7.7E-36 T 11-10-2018 AYJ52_14640 3034b894ef1f7c3619bef13db052f05f 311 Pfam PF03466 LysR substrate binding domain 103 307 4.5E-31 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14640 3034b894ef1f7c3619bef13db052f05f 311 SUPERFAMILY SSF46785 11 120 4.67E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14640 3034b894ef1f7c3619bef13db052f05f 311 Gene3D G3DSA:3.40.190.10 108 297 7.7E-36 T 11-10-2018 AYJ52_14640 3034b894ef1f7c3619bef13db052f05f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 9.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14640 3034b894ef1f7c3619bef13db052f05f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 9.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14640 3034b894ef1f7c3619bef13db052f05f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 9.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14640 3034b894ef1f7c3619bef13db052f05f 311 Gene3D G3DSA:1.10.10.10 12 98 3.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14640 3034b894ef1f7c3619bef13db052f05f 311 SUPERFAMILY SSF53850 103 309 2.36E-35 T 11-10-2018 AYJ52_10870 22f70fb7c3b4c0be57944d3ca6ee1568 140 Pfam PF01037 Lrp/AsnC ligand binding domain 69 135 1.5E-9 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ52_10870 22f70fb7c3b4c0be57944d3ca6ee1568 140 SMART SM00344 1 107 9.2E-20 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_10870 22f70fb7c3b4c0be57944d3ca6ee1568 140 Gene3D G3DSA:3.30.70.920 56 140 5.3E-13 T 11-10-2018 AYJ52_10870 22f70fb7c3b4c0be57944d3ca6ee1568 140 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 7.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_10870 22f70fb7c3b4c0be57944d3ca6ee1568 140 Gene3D G3DSA:1.10.10.10 1 52 3.0E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10870 22f70fb7c3b4c0be57944d3ca6ee1568 140 SUPERFAMILY SSF46785 1 56 2.16E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_10870 22f70fb7c3b4c0be57944d3ca6ee1568 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.8E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_10870 22f70fb7c3b4c0be57944d3ca6ee1568 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.8E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_10870 22f70fb7c3b4c0be57944d3ca6ee1568 140 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.8E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_10870 22f70fb7c3b4c0be57944d3ca6ee1568 140 SUPERFAMILY SSF54909 64 139 6.43E-11 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_09210 ff09102c5f15c04b8a2afde0683b6801 294 Gene3D G3DSA:3.40.190.10 93 288 8.0E-42 T 11-10-2018 AYJ52_09210 ff09102c5f15c04b8a2afde0683b6801 294 SUPERFAMILY SSF46785 1 111 1.58E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_09210 ff09102c5f15c04b8a2afde0683b6801 294 Pfam PF03466 LysR substrate binding domain 92 293 7.6E-52 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_09210 ff09102c5f15c04b8a2afde0683b6801 294 Gene3D G3DSA:1.10.10.10 1 86 5.8E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_09210 ff09102c5f15c04b8a2afde0683b6801 294 Gene3D G3DSA:3.40.190.10 164 266 8.0E-42 T 11-10-2018 AYJ52_09210 ff09102c5f15c04b8a2afde0683b6801 294 SUPERFAMILY SSF53850 93 293 1.04E-46 T 11-10-2018 AYJ52_09210 ff09102c5f15c04b8a2afde0683b6801 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.4E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_09210 ff09102c5f15c04b8a2afde0683b6801 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_09210 ff09102c5f15c04b8a2afde0683b6801 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_09210 ff09102c5f15c04b8a2afde0683b6801 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_10250 bc6e327eb339c1a53c6073182e22035b 406 Pfam PF07690 Major Facilitator Superfamily 32 246 9.9E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_10250 bc6e327eb339c1a53c6073182e22035b 406 Gene3D G3DSA:1.20.1250.20 225 404 5.7E-17 T 11-10-2018 AYJ52_10250 bc6e327eb339c1a53c6073182e22035b 406 SUPERFAMILY SSF103473 21 400 1.44E-52 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_10250 bc6e327eb339c1a53c6073182e22035b 406 Gene3D G3DSA:1.20.1250.20 21 209 4.1E-21 T 11-10-2018 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 Pfam PF00108 Thiolase, N-terminal domain 5 268 3.5E-80 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 SUPERFAMILY SSF53901 277 400 9.73E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 PIRSF PIRSF000429 1 402 4.7E-134 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 Gene3D G3DSA:3.40.47.10 6 282 5.9E-159 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 Gene3D G3DSA:3.40.47.10 141 398 5.9E-159 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 Pfam PF02803 Thiolase, C-terminal domain 276 400 2.8E-46 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 401 7.3E-228 T 11-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 2.8E-140 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AYJ52_15015 36cdf6bd32ef694459833460577db0fd 404 SUPERFAMILY SSF53901 3 276 3.68E-83 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_14680 d742d16f2fa67cbeab3b577919fa21fa 447 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_14680 d742d16f2fa67cbeab3b577919fa21fa 447 Pfam PF07690 Major Facilitator Superfamily 29 397 8.6E-47 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_14680 d742d16f2fa67cbeab3b577919fa21fa 447 SUPERFAMILY SSF103473 10 439 1.28E-81 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_14680 d742d16f2fa67cbeab3b577919fa21fa 447 Gene3D G3DSA:1.20.1250.20 20 433 1.8E-69 T 11-10-2018 AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 Gene3D G3DSA:2.60.260.20 216 316 1.2E-19 T 11-10-2018 AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 Pfam PF00226 DnaJ domain 4 65 1.1E-21 T 11-10-2018 IPR001623 DnaJ domain AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 SMART SM00271 3 60 6.3E-26 T 11-10-2018 IPR001623 DnaJ domain AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 Pfam PF01556 DnaJ C terminal domain 139 291 5.6E-32 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 SUPERFAMILY SSF46565 3 101 6.15E-29 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 Gene3D G3DSA:1.10.287.110 1 130 1.2E-29 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 SUPERFAMILY SSF49493 221 302 7.06E-16 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 PRINTS PR00625 DnaJ domain signature 40 60 9.4E-18 T 11-10-2018 IPR001623 DnaJ domain AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 PRINTS PR00625 DnaJ domain signature 6 24 9.4E-18 T 11-10-2018 IPR001623 DnaJ domain AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 PRINTS PR00625 DnaJ domain signature 24 39 9.4E-18 T 11-10-2018 IPR001623 DnaJ domain AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 SUPERFAMILY SSF49493 131 217 5.49E-14 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AYJ52_07040 7cecf3cb7d1520e5703a74a534dacb4a 318 Gene3D G3DSA:2.60.260.20 132 213 3.4E-20 T 11-10-2018 AYJ52_11360 671ec0cb627974f2fb5ba7f0be3df51a 319 Pfam PF03466 LysR substrate binding domain 89 288 1.3E-35 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_11360 671ec0cb627974f2fb5ba7f0be3df51a 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_11360 671ec0cb627974f2fb5ba7f0be3df51a 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_11360 671ec0cb627974f2fb5ba7f0be3df51a 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_11360 671ec0cb627974f2fb5ba7f0be3df51a 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.9E-23 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_11360 671ec0cb627974f2fb5ba7f0be3df51a 319 Gene3D G3DSA:3.40.190.10 162 267 3.9E-76 T 11-10-2018 AYJ52_11360 671ec0cb627974f2fb5ba7f0be3df51a 319 Gene3D G3DSA:3.40.190.10 93 292 3.9E-76 T 11-10-2018 AYJ52_11360 671ec0cb627974f2fb5ba7f0be3df51a 319 SUPERFAMILY SSF46785 1 83 6.35E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_11360 671ec0cb627974f2fb5ba7f0be3df51a 319 SUPERFAMILY SSF53850 89 292 5.34E-32 T 11-10-2018 AYJ52_11360 671ec0cb627974f2fb5ba7f0be3df51a 319 Gene3D G3DSA:1.10.10.10 1 91 1.1E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14915 9e3a27504f1f572da30006af79abc6a0 182 Pfam PF02082 Transcriptional regulator 4 83 1.1E-24 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AYJ52_14915 9e3a27504f1f572da30006af79abc6a0 182 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AYJ52_14915 9e3a27504f1f572da30006af79abc6a0 182 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 141 2.5E-30 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AYJ52_14915 9e3a27504f1f572da30006af79abc6a0 182 SUPERFAMILY SSF46785 4 144 1.29E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14915 9e3a27504f1f572da30006af79abc6a0 182 Gene3D G3DSA:1.10.10.10 2 148 9.8E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12615 674c7867ef668771acc46f395f6b0b33 654 Gene3D G3DSA:3.40.640.10 282 542 1.5E-166 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_12615 674c7867ef668771acc46f395f6b0b33 654 Pfam PF00266 Aminotransferase class-V 271 640 2.1E-145 T 11-10-2018 IPR000192 Aminotransferase class V domain AYJ52_12615 674c7867ef668771acc46f395f6b0b33 654 SUPERFAMILY SSF53383 250 649 4.95E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_12615 674c7867ef668771acc46f395f6b0b33 654 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 253 648 7.2E-166 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AYJ52_12615 674c7867ef668771acc46f395f6b0b33 654 Gene3D G3DSA:3.90.1150.10 254 643 1.5E-166 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 Hamap MF_00367 GTPase Era [era]. 37 339 36.065 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 Gene3D G3DSA:3.40.50.300 36 214 8.8E-50 T 11-10-2018 AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 40 202 2.2E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 Pfam PF07650 KH domain 263 327 3.2E-15 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 Pfam PF01926 50S ribosome-binding GTPase 42 156 5.9E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 42 62 2.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 110 128 2.5E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 SUPERFAMILY SSF54814 214 340 1.24E-37 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 Gene3D G3DSA:3.30.300.20 217 341 4.9E-41 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 SUPERFAMILY SSF52540 42 236 1.69E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18610 e130ba914968b8e5bb3ec46b64c8a6c1 342 TIGRFAM TIGR00436 era: GTP-binding protein Era 40 322 2.6E-94 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_09705 66c99aa8d1d8d78ebc5d284ac688565f 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 9.6E-68 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AYJ52_09705 66c99aa8d1d8d78ebc5d284ac688565f 156 Gene3D G3DSA:1.10.455.10 2 155 1.5E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AYJ52_09705 66c99aa8d1d8d78ebc5d284ac688565f 156 SUPERFAMILY SSF47973 6 149 3.27E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AYJ52_09705 66c99aa8d1d8d78ebc5d284ac688565f 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.166 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AYJ52_09705 66c99aa8d1d8d78ebc5d284ac688565f 156 PIRSF PIRSF002122 3 156 2.1E-58 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AYJ52_09705 66c99aa8d1d8d78ebc5d284ac688565f 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_09705 66c99aa8d1d8d78ebc5d284ac688565f 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.9E-64 T 11-10-2018 IPR023798 Ribosomal protein S7 domain AYJ52_02455 d5459d8baab2dd5526dd83bf103f922b 415 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 278 4.0E-59 T 11-10-2018 IPR017039 Virulence factor BrkB AYJ52_02455 d5459d8baab2dd5526dd83bf103f922b 415 Pfam PF03631 Virulence factor BrkB 30 277 1.5E-52 T 11-10-2018 IPR017039 Virulence factor BrkB AYJ52_02455 d5459d8baab2dd5526dd83bf103f922b 415 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 2 302 21.24 T 11-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AYJ52_05550 10b7d868509d49eb1bd5ebfa4f07f345 125 Gene3D G3DSA:3.10.450.50 2 125 2.4E-23 T 11-10-2018 AYJ52_05550 10b7d868509d49eb1bd5ebfa4f07f345 125 SUPERFAMILY SSF54427 4 113 8.77E-18 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_05550 10b7d868509d49eb1bd5ebfa4f07f345 125 Pfam PF12680 SnoaL-like domain 10 106 7.1E-11 T 11-10-2018 IPR037401 SnoaL-like domain AYJ52_07015 13b93475423a9eade2dcbcb6ed56ba86 432 Pfam PF00144 Beta-lactamase 52 390 3.6E-52 T 11-10-2018 IPR001466 Beta-lactamase-related AYJ52_07015 13b93475423a9eade2dcbcb6ed56ba86 432 SUPERFAMILY SSF56601 35 387 4.41E-67 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_07015 13b93475423a9eade2dcbcb6ed56ba86 432 Gene3D G3DSA:3.40.710.30 38 408 1.3E-73 T 11-10-2018 AYJ52_11420 a99bad9f2a56a86ee758d97cabc716b3 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 112 6.1E-19 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AYJ52_11420 a99bad9f2a56a86ee758d97cabc716b3 135 SUPERFAMILY SSF51316 1 133 1.36E-41 T 11-10-2018 IPR011057 Mss4-like superfamily AYJ52_11420 a99bad9f2a56a86ee758d97cabc716b3 135 Gene3D G3DSA:3.90.1590.10 2 118 2.5E-23 T 11-10-2018 AYJ52_16915 544500b60aeb7e0bae9ac31edf205fe5 328 SUPERFAMILY SSF51735 116 268 6.47E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_16915 544500b60aeb7e0bae9ac31edf205fe5 328 SMART SM00829 13 326 1.6E-30 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AYJ52_16915 544500b60aeb7e0bae9ac31edf205fe5 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 91 2.0E-9 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AYJ52_16915 544500b60aeb7e0bae9ac31edf205fe5 328 Gene3D G3DSA:3.40.50.720 127 272 6.0E-111 T 11-10-2018 AYJ52_16915 544500b60aeb7e0bae9ac31edf205fe5 328 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AYJ52_16915 544500b60aeb7e0bae9ac31edf205fe5 328 SUPERFAMILY SSF50129 4 148 1.4E-36 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_16915 544500b60aeb7e0bae9ac31edf205fe5 328 Gene3D G3DSA:3.90.180.10 15 322 6.0E-111 T 11-10-2018 AYJ52_16915 544500b60aeb7e0bae9ac31edf205fe5 328 Pfam PF00107 Zinc-binding dehydrogenase 155 260 2.0E-30 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AYJ52_12200 6375d6bf99c36b1beefdef924a51fc4d 512 Gene3D G3DSA:3.40.50.720 6 193 1.4E-64 T 11-10-2018 AYJ52_12200 6375d6bf99c36b1beefdef924a51fc4d 512 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 419 497 2.2E-12 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_12200 6375d6bf99c36b1beefdef924a51fc4d 512 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 288 1.2E-25 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_12200 6375d6bf99c36b1beefdef924a51fc4d 512 SUPERFAMILY SSF48179 190 295 3.32E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_12200 6375d6bf99c36b1beefdef924a51fc4d 512 SUPERFAMILY SSF48179 419 496 3.32E-14 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_12200 6375d6bf99c36b1beefdef924a51fc4d 512 Gene3D G3DSA:3.30.750.190 294 411 2.1E-85 T 11-10-2018 AYJ52_12200 6375d6bf99c36b1beefdef924a51fc4d 512 SUPERFAMILY SSF51735 9 190 7.76E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_12200 6375d6bf99c36b1beefdef924a51fc4d 512 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 11 187 1.3E-59 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_12200 6375d6bf99c36b1beefdef924a51fc4d 512 Gene3D G3DSA:1.10.1040.50 194 492 2.1E-85 T 11-10-2018 AYJ52_13600 47834738b7adc6bbc3a6974cefbdb7b1 594 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 511 3.8E-75 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AYJ52_13600 47834738b7adc6bbc3a6974cefbdb7b1 594 Gene3D G3DSA:3.40.190.10 218 336 3.5E-22 T 11-10-2018 AYJ52_13600 47834738b7adc6bbc3a6974cefbdb7b1 594 SUPERFAMILY SSF53850 29 589 5.79E-91 T 11-10-2018 AYJ52_13600 47834738b7adc6bbc3a6974cefbdb7b1 594 Gene3D G3DSA:3.90.76.10 44 217 8.0E-34 T 11-10-2018 AYJ52_13600 47834738b7adc6bbc3a6974cefbdb7b1 594 Gene3D G3DSA:3.10.105.10 337 559 6.3E-34 T 11-10-2018 AYJ52_13600 47834738b7adc6bbc3a6974cefbdb7b1 594 PIRSF PIRSF002741 2 591 1.2E-62 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AYJ52_03500 139921aae5c2e60b58a4f249b814fee5 127 Pfam PF12568 Acetyltransferase (GNAT) domain 3 98 1.0E-10 T 11-10-2018 IPR000182 GNAT domain AYJ52_03500 139921aae5c2e60b58a4f249b814fee5 127 SUPERFAMILY SSF55729 1 108 9.62E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_03500 139921aae5c2e60b58a4f249b814fee5 127 Gene3D G3DSA:3.40.630.30 1 112 3.9E-16 T 11-10-2018 AYJ52_15290 d3e633198a720fc56d5644e87d41c9d2 281 PIRSF PIRSF007580 2 272 4.0E-60 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_15290 d3e633198a720fc56d5644e87d41c9d2 281 Pfam PF10118 Predicted metal-dependent hydrolase 14 259 8.1E-71 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_06680 dddc66505e175ee869d9447aeb524525 474 Pfam PF13726 Na+-H+ antiporter family 2 88 7.1E-33 T 11-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal AYJ52_06680 dddc66505e175ee869d9447aeb524525 474 Pfam PF03553 Na+/H+ antiporter family 150 468 1.4E-64 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AYJ52_06680 dddc66505e175ee869d9447aeb524525 474 PRINTS PR00173 Glutamate-aspartate symporter signature 407 426 1.4E-5 T 11-10-2018 AYJ52_06680 dddc66505e175ee869d9447aeb524525 474 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.4E-5 T 11-10-2018 AYJ52_15685 0061eb3af214f24a66fa5ff9779dff23 274 Pfam PF01148 Cytidylyltransferase family 3 265 5.9E-61 T 11-10-2018 AYJ52_15685 0061eb3af214f24a66fa5ff9779dff23 274 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 225 251 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AYJ52_01220 fe142d46a951d1913bb3cb455c36d413 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 4.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_01220 fe142d46a951d1913bb3cb455c36d413 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 4.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_01220 fe142d46a951d1913bb3cb455c36d413 341 SUPERFAMILY SSF46689 286 335 8.96E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_01220 fe142d46a951d1913bb3cb455c36d413 341 SMART SM00342 250 332 1.9E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_01220 fe142d46a951d1913bb3cb455c36d413 341 Pfam PF12833 Helix-turn-helix domain 257 332 8.0E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_01220 fe142d46a951d1913bb3cb455c36d413 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 203 6.5E-22 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_01220 fe142d46a951d1913bb3cb455c36d413 341 Gene3D G3DSA:1.10.10.60 232 339 4.5E-22 T 11-10-2018 AYJ52_13305 5c05d357485d5e268bc3a6c239de7038 162 SUPERFAMILY SSF46785 7 66 5.77E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_13305 5c05d357485d5e268bc3a6c239de7038 162 Gene3D G3DSA:1.10.10.10 2 61 2.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_13305 5c05d357485d5e268bc3a6c239de7038 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.6E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_13305 5c05d357485d5e268bc3a6c239de7038 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.6E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_13305 5c05d357485d5e268bc3a6c239de7038 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.6E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_13305 5c05d357485d5e268bc3a6c239de7038 162 Pfam PF13404 AsnC-type helix-turn-helix domain 8 48 3.8E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_13305 5c05d357485d5e268bc3a6c239de7038 162 Pfam PF01037 Lrp/AsnC ligand binding domain 74 147 5.1E-18 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ52_13305 5c05d357485d5e268bc3a6c239de7038 162 SUPERFAMILY SSF54909 70 154 1.88E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_13305 5c05d357485d5e268bc3a6c239de7038 162 Gene3D G3DSA:3.30.70.920 62 158 2.4E-19 T 11-10-2018 AYJ52_13305 5c05d357485d5e268bc3a6c239de7038 162 SMART SM00344 8 117 5.1E-39 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_09115 4d50e210b83355558b1dab0b1e8398ab 238 Gene3D G3DSA:1.10.10.10 130 238 7.8E-41 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_09115 4d50e210b83355558b1dab0b1e8398ab 238 SUPERFAMILY SSF52172 8 130 3.42E-38 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_09115 4d50e210b83355558b1dab0b1e8398ab 238 SMART SM00862 155 231 2.8E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_09115 4d50e210b83355558b1dab0b1e8398ab 238 SUPERFAMILY SSF46894 135 232 5.1E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_09115 4d50e210b83355558b1dab0b1e8398ab 238 Gene3D G3DSA:3.40.50.2300 1 129 3.9E-37 T 11-10-2018 AYJ52_09115 4d50e210b83355558b1dab0b1e8398ab 238 Pfam PF00072 Response regulator receiver domain 10 119 1.1E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_09115 4d50e210b83355558b1dab0b1e8398ab 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.3E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_09115 4d50e210b83355558b1dab0b1e8398ab 238 SMART SM00448 8 118 6.1E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_01365 ce237454f71410d056c94e60661f9738 404 SUPERFAMILY SSF103473 8 389 1.23E-58 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_01365 ce237454f71410d056c94e60661f9738 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 391 1.4E-88 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AYJ52_01365 ce237454f71410d056c94e60661f9738 404 Gene3D G3DSA:1.20.1720.10 14 394 1.5E-103 T 11-10-2018 AYJ52_01365 ce237454f71410d056c94e60661f9738 404 Pfam PF07690 Major Facilitator Superfamily 18 361 7.7E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_18040 96c1db8a345673f72fca4e077203c29c 393 Pfam PF12686 Protein of unknown function (DUF3800) 273 310 1.7E-5 T 11-10-2018 IPR024524 Protein of unknown function DUF3800 AYJ52_18040 96c1db8a345673f72fca4e077203c29c 393 Pfam PF12686 Protein of unknown function (DUF3800) 11 108 1.9E-5 T 11-10-2018 IPR024524 Protein of unknown function DUF3800 AYJ52_03340 71ea2b5cffa82457fa5742caffc5fb1c 473 Pfam PF00324 Amino acid permease 28 469 1.6E-114 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_03340 71ea2b5cffa82457fa5742caffc5fb1c 473 PIRSF PIRSF006060 1 473 2.1E-72 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_03340 71ea2b5cffa82457fa5742caffc5fb1c 473 ProSitePatterns PS00218 Amino acid permeases signature. 53 84 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_03340 71ea2b5cffa82457fa5742caffc5fb1c 473 Gene3D G3DSA:1.20.1740.10 20 473 5.4E-61 T 11-10-2018 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 SMART SM00382 160 303 5.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 SUPERFAMILY SSF46689 354 463 2.08E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 SUPERFAMILY SSF52540 140 382 1.66E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 443 2.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 463 2.7E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 Pfam PF00158 Sigma-54 interaction domain 140 306 5.2E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 Gene3D G3DSA:3.40.50.300 132 310 1.5E-61 T 11-10-2018 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 Pfam PF00072 Response regulator receiver domain 8 116 7.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 Pfam PF02954 Bacterial regulatory protein, Fis family 420 460 4.5E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 SMART SM00448 6 117 2.3E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 Gene3D G3DSA:1.10.8.60 311 377 2.2E-21 T 11-10-2018 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 SUPERFAMILY SSF52172 7 185 1.17E-38 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 Gene3D G3DSA:3.40.50.2300 1 131 1.7E-30 T 11-10-2018 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ52_06395 0d905f67990745f8d0c2bc4131c7d962 470 Gene3D G3DSA:1.10.10.60 393 465 2.8E-15 T 11-10-2018 AYJ52_11755 3634cd4e99182f0e3286df5116616d57 333 Gene3D G3DSA:3.30.200.70 21 115 5.2E-22 T 11-10-2018 AYJ52_11755 3634cd4e99182f0e3286df5116616d57 333 Gene3D G3DSA:1.10.510.10 61 274 5.2E-22 T 11-10-2018 AYJ52_11755 3634cd4e99182f0e3286df5116616d57 333 Pfam PF01636 Phosphotransferase enzyme family 40 269 6.5E-32 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AYJ52_11755 3634cd4e99182f0e3286df5116616d57 333 SUPERFAMILY SSF56112 17 304 2.81E-56 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_11755 3634cd4e99182f0e3286df5116616d57 333 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 210 222 - T 11-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 AYJ52_11755 3634cd4e99182f0e3286df5116616d57 333 Gene3D G3DSA:1.20.1270.170 160 305 5.2E-22 T 11-10-2018 AYJ52_12245 29b776b772cd71bf0d7f12dcc4bc8234 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12245 29b776b772cd71bf0d7f12dcc4bc8234 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12245 29b776b772cd71bf0d7f12dcc4bc8234 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12245 29b776b772cd71bf0d7f12dcc4bc8234 303 SUPERFAMILY SSF53850 92 298 6.52E-43 T 11-10-2018 AYJ52_12245 29b776b772cd71bf0d7f12dcc4bc8234 303 Gene3D G3DSA:1.10.10.10 1 85 4.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12245 29b776b772cd71bf0d7f12dcc4bc8234 303 SUPERFAMILY SSF46785 5 85 1.45E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12245 29b776b772cd71bf0d7f12dcc4bc8234 303 Pfam PF03466 LysR substrate binding domain 92 295 2.6E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12245 29b776b772cd71bf0d7f12dcc4bc8234 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12245 29b776b772cd71bf0d7f12dcc4bc8234 303 Gene3D G3DSA:3.40.190.290 92 295 4.2E-62 T 11-10-2018 AYJ52_01775 9475a9287992421ae7c75b0833caf7d0 192 Gene3D G3DSA:3.90.190.10 28 191 9.4E-36 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AYJ52_01775 9475a9287992421ae7c75b0833caf7d0 192 SUPERFAMILY SSF52799 38 164 1.5E-25 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AYJ52_01775 9475a9287992421ae7c75b0833caf7d0 192 Pfam PF00782 Dual specificity phosphatase, catalytic domain 54 160 5.6E-11 T 11-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 AYJ52_01775 9475a9287992421ae7c75b0833caf7d0 192 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 126 136 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AYJ52_04780 8a4cd20b63ecbb36128803e383351503 296 Pfam PF03466 LysR substrate binding domain 93 294 2.8E-33 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_04780 8a4cd20b63ecbb36128803e383351503 296 Gene3D G3DSA:3.40.190.290 94 295 9.3E-36 T 11-10-2018 AYJ52_04780 8a4cd20b63ecbb36128803e383351503 296 SUPERFAMILY SSF53850 93 294 1.45E-33 T 11-10-2018 AYJ52_04780 8a4cd20b63ecbb36128803e383351503 296 SUPERFAMILY SSF46785 1 113 3.81E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_04780 8a4cd20b63ecbb36128803e383351503 296 Gene3D G3DSA:1.10.10.10 4 89 5.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_04780 8a4cd20b63ecbb36128803e383351503 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.7E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_19160 4f4fe74057314074a2946632a33e26d4 572 SUPERFAMILY SSF51905 5 532 1.68E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_19160 4f4fe74057314074a2946632a33e26d4 572 Gene3D G3DSA:3.30.410.10 132 323 3.3E-44 T 11-10-2018 AYJ52_19160 4f4fe74057314074a2946632a33e26d4 572 Gene3D G3DSA:3.50.50.60 11 307 3.3E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_19160 4f4fe74057314074a2946632a33e26d4 572 Pfam PF00732 GMC oxidoreductase 8 283 5.9E-11 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AYJ52_19160 4f4fe74057314074a2946632a33e26d4 572 Pfam PF05199 GMC oxidoreductase 468 526 1.6E-17 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AYJ52_19160 4f4fe74057314074a2946632a33e26d4 572 Gene3D G3DSA:3.50.50.60 451 534 1.0E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_03385 4a96e1f985a74b097f63c08c40d22c57 469 Gene3D G3DSA:1.20.1600.10 46 436 1.2E-31 T 11-10-2018 AYJ52_03385 4a96e1f985a74b097f63c08c40d22c57 469 SUPERFAMILY SSF56954 48 431 2.09E-41 T 11-10-2018 AYJ52_03385 4a96e1f985a74b097f63c08c40d22c57 469 Pfam PF02321 Outer membrane efflux protein 59 233 5.9E-12 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_03385 4a96e1f985a74b097f63c08c40d22c57 469 Pfam PF02321 Outer membrane efflux protein 263 421 6.7E-7 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_14655 158f57701212501712e9da9e9cc20517 525 Gene3D G3DSA:3.40.605.10 43 518 1.0E-200 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_14655 158f57701212501712e9da9e9cc20517 525 SUPERFAMILY SSF53720 21 517 3.67E-99 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_14655 158f57701212501712e9da9e9cc20517 525 Gene3D G3DSA:3.40.309.10 266 453 1.0E-200 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_14655 158f57701212501712e9da9e9cc20517 525 Pfam PF00171 Aldehyde dehydrogenase family 18 457 2.6E-48 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_11090 271aea2dfffeaafbbc9960ed079d2911 507 Gene3D G3DSA:3.50.50.60 17 262 4.9E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11090 271aea2dfffeaafbbc9960ed079d2911 507 SUPERFAMILY SSF51905 23 480 7.52E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11090 271aea2dfffeaafbbc9960ed079d2911 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 23 45 5.9E-7 T 11-10-2018 AYJ52_11090 271aea2dfffeaafbbc9960ed079d2911 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 188 213 5.9E-7 T 11-10-2018 AYJ52_11090 271aea2dfffeaafbbc9960ed079d2911 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 5.9E-7 T 11-10-2018 AYJ52_11090 271aea2dfffeaafbbc9960ed079d2911 507 Gene3D G3DSA:3.50.50.60 328 507 1.4E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11090 271aea2dfffeaafbbc9960ed079d2911 507 SUPERFAMILY SSF51905 293 497 6.47E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11090 271aea2dfffeaafbbc9960ed079d2911 507 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 26 222 1.1E-15 T 11-10-2018 AYJ52_12830 c1ae95ad6c7adc598739f5e7cdc4b84a 296 SUPERFAMILY SSF53850 90 292 2.76E-36 T 11-10-2018 AYJ52_12830 c1ae95ad6c7adc598739f5e7cdc4b84a 296 SUPERFAMILY SSF46785 4 83 4.41E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12830 c1ae95ad6c7adc598739f5e7cdc4b84a 296 Gene3D G3DSA:3.40.190.290 91 292 1.5E-49 T 11-10-2018 AYJ52_12830 c1ae95ad6c7adc598739f5e7cdc4b84a 296 Pfam PF03466 LysR substrate binding domain 88 291 4.4E-32 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12830 c1ae95ad6c7adc598739f5e7cdc4b84a 296 Gene3D G3DSA:1.10.10.10 3 88 5.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12830 c1ae95ad6c7adc598739f5e7cdc4b84a 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.9E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_02575 d62d98601d5b7b74164ddb0d4040b590 128 SUPERFAMILY SSF53137 15 128 5.89E-47 T 11-10-2018 AYJ52_02575 d62d98601d5b7b74164ddb0d4040b590 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 3.1E-54 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02575 d62d98601d5b7b74164ddb0d4040b590 128 Pfam PF00411 Ribosomal protein S11 18 127 3.5E-50 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AYJ52_02575 d62d98601d5b7b74164ddb0d4040b590 128 Gene3D G3DSA:3.30.420.80 1 128 5.2E-54 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 AYJ52_02575 d62d98601d5b7b74164ddb0d4040b590 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 128 32.395 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AYJ52_02575 d62d98601d5b7b74164ddb0d4040b590 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site AYJ52_02575 d62d98601d5b7b74164ddb0d4040b590 128 PIRSF PIRSF002131 1 128 1.4E-51 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AYJ52_07905 f763838c2733447152d0a3a825fb593d 446 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 329 1.5E-38 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_07905 f763838c2733447152d0a3a825fb593d 446 Gene3D G3DSA:1.10.287.470 94 185 1.5E-77 T 11-10-2018 AYJ52_07905 f763838c2733447152d0a3a825fb593d 446 Gene3D G3DSA:2.40.420.20 44 330 1.5E-77 T 11-10-2018 AYJ52_07905 f763838c2733447152d0a3a825fb593d 446 SUPERFAMILY SSF111369 52 247 2.48E-22 T 11-10-2018 AYJ52_07905 f763838c2733447152d0a3a825fb593d 446 Gene3D G3DSA:2.40.50.100 60 222 1.5E-77 T 11-10-2018 AYJ52_07905 f763838c2733447152d0a3a825fb593d 446 Gene3D G3DSA:2.40.30.170 49 312 1.5E-77 T 11-10-2018 AYJ52_07905 f763838c2733447152d0a3a825fb593d 446 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 249 4.7E-14 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_07905 f763838c2733447152d0a3a825fb593d 446 Gene3D G3DSA:2.40.420.20 364 442 6.8E-7 T 11-10-2018 AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 SMART SM00345 26 85 9.2E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 21 249 5.5E-100 T 11-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 4.6E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 4.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 4.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 Gene3D G3DSA:3.40.1410.10 105 239 2.5E-30 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 SMART SM00866 106 243 5.8E-33 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 SUPERFAMILY SSF46785 16 89 8.91E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 Pfam PF07702 UTRA domain 107 242 6.2E-33 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 Gene3D G3DSA:1.10.10.10 18 86 4.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_04560 096ec69c5182c9db005f57c3bca22f47 250 SUPERFAMILY SSF64288 110 249 5.65E-40 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AYJ52_09020 efa090969980e5b47c1e455653b20ff7 185 SUPERFAMILY SSF46689 6 74 3.54E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_09020 efa090969980e5b47c1e455653b20ff7 185 Gene3D G3DSA:1.10.357.10 2 180 1.6E-22 T 11-10-2018 AYJ52_09020 efa090969980e5b47c1e455653b20ff7 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.9E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_09020 efa090969980e5b47c1e455653b20ff7 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.9E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_09020 efa090969980e5b47c1e455653b20ff7 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 1.5E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_14880 ea06360e9683417afadddd5092aaa753 153 SUPERFAMILY SSF54637 8 149 7.74E-37 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_14880 ea06360e9683417afadddd5092aaa753 153 Pfam PF01575 MaoC like domain 15 122 8.6E-27 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AYJ52_14880 ea06360e9683417afadddd5092aaa753 153 Gene3D G3DSA:3.10.129.10 3 151 1.2E-45 T 11-10-2018 AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 SUPERFAMILY SSF54665 9 135 1.57E-36 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 Gene3D G3DSA:3.30.365.10 459 606 3.6E-291 T 11-10-2018 AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 Gene3D G3DSA:3.90.1170.50 17 137 3.6E-291 T 11-10-2018 AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 SMART SM01008 30 137 7.0E-38 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 SUPERFAMILY SSF56003 138 775 3.14E-201 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 30 135 9.5E-25 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 Gene3D G3DSA:3.30.365.10 151 407 3.6E-291 T 11-10-2018 AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 Gene3D G3DSA:3.30.365.10 185 279 3.6E-291 T 11-10-2018 AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 Gene3D G3DSA:3.30.365.10 138 774 3.6E-291 T 11-10-2018 AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 18 775 0.0 T 11-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 AYJ52_17770 29dc11e43eb6dcf6d15109c215ceed70 791 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 158 708 3.7E-198 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AYJ52_11855 676b8d38335cd4d7cf40dac05ba27e9e 434 Pfam PF07690 Major Facilitator Superfamily 28 348 5.4E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_11855 676b8d38335cd4d7cf40dac05ba27e9e 434 SUPERFAMILY SSF103473 10 429 1.23E-75 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_11855 676b8d38335cd4d7cf40dac05ba27e9e 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_11855 676b8d38335cd4d7cf40dac05ba27e9e 434 Gene3D G3DSA:1.20.1250.20 17 429 1.6E-69 T 11-10-2018 AYJ52_08925 c2a9042b6a09fd78da5557b7ec1729a8 468 Gene3D G3DSA:3.90.700.10 236 397 8.6E-91 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_08925 c2a9042b6a09fd78da5557b7ec1729a8 468 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 3 459 6.8E-200 T 11-10-2018 IPR012831 Precorrin 3B synthase CobZ AYJ52_08925 c2a9042b6a09fd78da5557b7ec1729a8 468 Gene3D G3DSA:3.50.50.60 3 455 8.6E-91 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_08925 c2a9042b6a09fd78da5557b7ec1729a8 468 SUPERFAMILY SSF51905 2 459 2.56E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_08925 c2a9042b6a09fd78da5557b7ec1729a8 468 Pfam PF00890 FAD binding domain 3 432 9.4E-34 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_08925 c2a9042b6a09fd78da5557b7ec1729a8 468 SUPERFAMILY SSF56425 236 396 2.55E-26 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AYJ52_10195 52ee9ba60d87cc106bbde820d0f86421 173 Pfam PF07883 Cupin domain 79 148 1.7E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AYJ52_10195 52ee9ba60d87cc106bbde820d0f86421 173 SUPERFAMILY SSF51182 44 167 1.49E-23 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_10195 52ee9ba60d87cc106bbde820d0f86421 173 Gene3D G3DSA:2.60.120.10 42 173 2.7E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_04775 69b90ff588c2049ec398b3cba6f406b5 431 Pfam PF00860 Permease family 30 399 2.2E-95 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AYJ52_04775 69b90ff588c2049ec398b3cba6f406b5 431 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 27 423 1.3E-109 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AYJ52_01480 82b373a2ddc082cb34389f6e6633872e 178 SUPERFAMILY SSF50341 27 168 5.62E-28 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AYJ52_01480 82b373a2ddc082cb34389f6e6633872e 178 Gene3D G3DSA:2.40.50.180 50 116 2.6E-20 T 11-10-2018 AYJ52_01480 82b373a2ddc082cb34389f6e6633872e 178 Gene3D G3DSA:2.30.30.40 34 153 2.6E-20 T 11-10-2018 AYJ52_01480 82b373a2ddc082cb34389f6e6633872e 178 Pfam PF01584 CheW-like domain 33 152 4.0E-24 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AYJ52_01480 82b373a2ddc082cb34389f6e6633872e 178 SMART SM00260 27 164 1.6E-5 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AYJ52_01885 523550d3709ee1dfc95db1f6d741a5ce 593 Gene3D G3DSA:2.40.110.10 161 281 3.9E-94 T 11-10-2018 AYJ52_01885 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 1.2E-16 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_01885 523550d3709ee1dfc95db1f6d741a5ce 593 Gene3D G3DSA:1.20.140.10 282 451 3.9E-94 T 11-10-2018 AYJ52_01885 523550d3709ee1dfc95db1f6d741a5ce 593 SUPERFAMILY SSF56645 38 279 2.36E-57 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_01885 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 9.4E-7 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AYJ52_01885 523550d3709ee1dfc95db1f6d741a5ce 593 Gene3D G3DSA:1.10.540.10 44 160 3.9E-94 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_01885 523550d3709ee1dfc95db1f6d741a5ce 593 SUPERFAMILY SSF47203 288 474 7.73E-47 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_01885 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 583 3.0E-24 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AYJ52_01885 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 450 3.4E-17 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_01885 523550d3709ee1dfc95db1f6d741a5ce 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 1.1E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_15700 101864605a7c7521f644e6cefa2e2046 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 241 41.399 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AYJ52_15700 101864605a7c7521f644e6cefa2e2046 242 Gene3D G3DSA:3.40.1160.10 3 242 2.2E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AYJ52_15700 101864605a7c7521f644e6cefa2e2046 242 SUPERFAMILY SSF53633 7 240 3.67E-63 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AYJ52_15700 101864605a7c7521f644e6cefa2e2046 242 Pfam PF00696 Amino acid kinase family 11 220 9.7E-24 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AYJ52_15700 101864605a7c7521f644e6cefa2e2046 242 PIRSF PIRSF005650 4 242 5.6E-84 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AYJ52_15700 101864605a7c7521f644e6cefa2e2046 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.6E-93 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AYJ52_05875 806fd53bdc0ea05fba2029515043dc17 181 PIRSF PIRSF000303 1 181 1.4E-60 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AYJ52_05875 806fd53bdc0ea05fba2029515043dc17 181 Pfam PF00255 Glutathione peroxidase 5 111 4.1E-39 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AYJ52_05875 806fd53bdc0ea05fba2029515043dc17 181 SUPERFAMILY SSF52833 3 180 1.85E-54 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_05875 806fd53bdc0ea05fba2029515043dc17 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AYJ52_05875 806fd53bdc0ea05fba2029515043dc17 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 2.0E-18 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AYJ52_05875 806fd53bdc0ea05fba2029515043dc17 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.0E-18 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AYJ52_05875 806fd53bdc0ea05fba2029515043dc17 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.0E-18 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AYJ52_05875 806fd53bdc0ea05fba2029515043dc17 181 Gene3D G3DSA:3.40.30.10 1 181 1.2E-61 T 11-10-2018 AYJ52_15860 2eba4e4c223a9be2885fc65f2dff3778 757 Pfam PF00384 Molybdopterin oxidoreductase 65 445 1.6E-46 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_15860 2eba4e4c223a9be2885fc65f2dff3778 757 SMART SM00926 8 62 2.7E-12 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_15860 2eba4e4c223a9be2885fc65f2dff3778 757 Gene3D G3DSA:3.40.228.10 141 334 3.6E-89 T 11-10-2018 AYJ52_15860 2eba4e4c223a9be2885fc65f2dff3778 757 SUPERFAMILY SSF50692 633 756 5.2E-27 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AYJ52_15860 2eba4e4c223a9be2885fc65f2dff3778 757 Gene3D G3DSA:2.20.25.90 2 67 1.2E-13 T 11-10-2018 AYJ52_15860 2eba4e4c223a9be2885fc65f2dff3778 757 SUPERFAMILY SSF53706 9 505 9.68E-117 T 11-10-2018 AYJ52_15860 2eba4e4c223a9be2885fc65f2dff3778 757 Pfam PF01568 Molydopterin dinucleotide binding domain 637 750 1.4E-19 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AYJ52_15860 2eba4e4c223a9be2885fc65f2dff3778 757 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 9 58 3.6E-12 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_15860 2eba4e4c223a9be2885fc65f2dff3778 757 Gene3D G3DSA:3.40.50.740 72 483 3.6E-89 T 11-10-2018 AYJ52_15860 2eba4e4c223a9be2885fc65f2dff3778 757 Gene3D G3DSA:2.40.40.20 613 757 6.5E-23 T 11-10-2018 AYJ52_06150 a16c38a7b5caaeb041a912e1dc2bfc16 127 Gene3D G3DSA:3.40.50.300 1 119 3.5E-25 T 11-10-2018 AYJ52_06150 a16c38a7b5caaeb041a912e1dc2bfc16 127 Pfam PF01078 Magnesium chelatase, subunit ChlI 1 97 1.1E-44 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain AYJ52_06150 a16c38a7b5caaeb041a912e1dc2bfc16 127 SUPERFAMILY SSF52540 1 99 1.15E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_12590 c691e109c5efc670b3cea1ddccd0583a 243 PIRSF PIRSF039085 1 242 1.5E-102 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AYJ52_12590 c691e109c5efc670b3cea1ddccd0583a 243 Gene3D G3DSA:3.40.50.300 3 242 1.7E-77 T 11-10-2018 AYJ52_12590 c691e109c5efc670b3cea1ddccd0583a 243 Pfam PF00005 ABC transporter 19 167 5.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_12590 c691e109c5efc670b3cea1ddccd0583a 243 SUPERFAMILY SSF52540 3 237 4.02E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_12590 c691e109c5efc670b3cea1ddccd0583a 243 SMART SM00382 28 215 2.6E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_12590 c691e109c5efc670b3cea1ddccd0583a 243 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_13540 85155e8ce69a51e183f319efb95a5b0f 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_13540 85155e8ce69a51e183f319efb95a5b0f 232 Gene3D G3DSA:3.20.20.70 2 232 1.7E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_13540 85155e8ce69a51e183f319efb95a5b0f 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 9 227 5.1E-62 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_13540 85155e8ce69a51e183f319efb95a5b0f 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 5 232 37.803 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_13540 85155e8ce69a51e183f319efb95a5b0f 232 SMART SM00934 7 227 1.4E-95 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_13540 85155e8ce69a51e183f319efb95a5b0f 232 SUPERFAMILY SSF51366 8 230 2.39E-72 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AYJ52_13540 85155e8ce69a51e183f319efb95a5b0f 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 8 226 1.2E-48 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_06565 6e65d7772b6f9cc5caa1d571a30180c2 278 Pfam PF11356 Type II secretion system protein C 26 139 1.1E-14 T 11-10-2018 IPR024961 Type II secretion system protein C, N-terminal AYJ52_06565 6e65d7772b6f9cc5caa1d571a30180c2 278 Gene3D G3DSA:2.30.42.10 178 276 9.6E-13 T 11-10-2018 AYJ52_06565 6e65d7772b6f9cc5caa1d571a30180c2 278 SMART SM00228 200 269 5.6E-5 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_06565 6e65d7772b6f9cc5caa1d571a30180c2 278 Gene3D G3DSA:2.30.30.830 82 146 1.7E-7 T 11-10-2018 AYJ52_06565 6e65d7772b6f9cc5caa1d571a30180c2 278 SUPERFAMILY SSF50156 186 275 5.52E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AYJ52_07900 067585fa4b31cbefd5f5efc9d6a8c314 664 Gene3D G3DSA:3.40.50.300 4 288 3.2E-68 T 11-10-2018 AYJ52_07900 067585fa4b31cbefd5f5efc9d6a8c314 664 Pfam PF00005 ABC transporter 26 174 1.5E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_07900 067585fa4b31cbefd5f5efc9d6a8c314 664 SMART SM00382 35 229 1.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_07900 067585fa4b31cbefd5f5efc9d6a8c314 664 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_07900 067585fa4b31cbefd5f5efc9d6a8c314 664 SUPERFAMILY SSF52540 6 227 2.17E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07900 067585fa4b31cbefd5f5efc9d6a8c314 664 Pfam PF02687 FtsX-like permease family 568 657 2.8E-13 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AYJ52_07900 067585fa4b31cbefd5f5efc9d6a8c314 664 Pfam PF12704 MacB-like periplasmic core domain 286 505 7.0E-40 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AYJ52_09200 73c9f26fa03328c1df9644afac330085 211 SUPERFAMILY SSF53271 5 206 3.54E-66 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AYJ52_09200 73c9f26fa03328c1df9644afac330085 211 Pfam PF14681 Uracil phosphoribosyltransferase 7 206 1.4E-64 T 11-10-2018 AYJ52_09200 73c9f26fa03328c1df9644afac330085 211 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 2.1E-86 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AYJ52_09200 73c9f26fa03328c1df9644afac330085 211 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.891 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AYJ52_09200 73c9f26fa03328c1df9644afac330085 211 Gene3D G3DSA:3.40.50.2020 2 207 2.6E-70 T 11-10-2018 AYJ52_16370 a7b5d059f7f119f0243d1a950de2ea53 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_16370 a7b5d059f7f119f0243d1a950de2ea53 503 Pfam PF00171 Aldehyde dehydrogenase family 27 490 1.6E-158 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_16370 a7b5d059f7f119f0243d1a950de2ea53 503 Gene3D G3DSA:3.40.605.10 23 489 8.0E-159 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_16370 a7b5d059f7f119f0243d1a950de2ea53 503 Gene3D G3DSA:3.40.309.10 266 461 8.0E-159 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_16370 a7b5d059f7f119f0243d1a950de2ea53 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_16370 a7b5d059f7f119f0243d1a950de2ea53 503 SUPERFAMILY SSF53720 14 495 2.88E-158 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 SUPERFAMILY SSF52540 394 566 3.82E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 325 372 3.8E-12 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 Gene3D G3DSA:3.40.50.300 397 570 1.6E-71 T 11-10-2018 AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 SUPERFAMILY SSF50447 572 655 1.04E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 Gene3D G3DSA:3.40.50.10050 693 800 4.1E-36 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 401 558 8.2E-33 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 318 899 2.6E-248 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 SUPERFAMILY SSF46955 3 51 3.11E-8 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 897 16.816 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 Pfam PF11987 Translation-initiation factor 2 684 789 1.6E-35 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 SUPERFAMILY SSF50447 801 897 9.15E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 98 5.6E-11 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 SUPERFAMILY SSF52156 677 806 5.49E-35 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 Gene3D G3DSA:2.40.30.10 801 898 2.4E-29 T 11-10-2018 AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 Gene3D G3DSA:3.30.56.50 2 51 3.7E-7 T 11-10-2018 AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 Pfam PF00009 Elongation factor Tu GTP binding domain 404 559 1.3E-34 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 ProSitePatterns PS01176 Initiation factor 2 signature. 850 872 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AYJ52_06905 89177a51c471ff6047b75f58d0acbc35 899 Gene3D G3DSA:2.40.30.10 571 688 1.3E-39 T 11-10-2018 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 Gene3D G3DSA:3.20.70.20 215 882 1.0E-247 T 11-10-2018 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 264 874 2.8E-213 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 SUPERFAMILY SSF51998 337 874 1.53E-182 T 11-10-2018 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 278 869 1.9E-120 T 11-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 716 738 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 261 332 1.6E-19 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 SUPERFAMILY SSF48168 128 336 5.36E-58 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 Pfam PF02867 Ribonucleotide reductase, barrel domain 338 872 7.1E-185 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 584 607 4.1E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 547 558 4.1E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 622 644 4.1E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 413 432 4.1E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 727 754 4.1E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 PRINTS PR01183 Ribonucleotide reductase large chain signature 650 673 4.1E-47 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 Pfam PF03477 ATP cone domain 11 108 1.1E-17 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AYJ52_09110 6b09cac4848618adae58a1906b9da9ea 944 Pfam PF03477 ATP cone domain 123 204 1.5E-6 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AYJ52_06580 bd58c4a6e071b4676b357952fa068fc2 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 189 4.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_06580 bd58c4a6e071b4676b357952fa068fc2 222 Gene3D G3DSA:3.40.50.1000 12 216 1.4E-62 T 11-10-2018 IPR023214 HAD superfamily AYJ52_06580 bd58c4a6e071b4676b357952fa068fc2 222 Gene3D G3DSA:1.10.150.240 24 94 1.4E-62 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ52_06580 bd58c4a6e071b4676b357952fa068fc2 222 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 12 220 6.0E-58 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AYJ52_06580 bd58c4a6e071b4676b357952fa068fc2 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 195 2.8E-36 T 11-10-2018 AYJ52_06580 bd58c4a6e071b4676b357952fa068fc2 222 SUPERFAMILY SSF56784 7 220 8.68E-59 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_06580 bd58c4a6e071b4676b357952fa068fc2 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 195 4.6E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_10410 2e7abf52ab83c3334ac26c4ea45e5073 146 Gene3D G3DSA:3.30.530.20 2 146 1.9E-18 T 11-10-2018 IPR023393 START-like domain superfamily AYJ52_10410 2e7abf52ab83c3334ac26c4ea45e5073 146 SUPERFAMILY SSF55961 3 144 2.36E-19 T 11-10-2018 AYJ52_10410 2e7abf52ab83c3334ac26c4ea45e5073 146 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 122 4.8E-9 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AYJ52_01935 decd0c5990095008c2738aa92856b707 310 Pfam PF08437 Glycosyl transferase family 8 C-terminal 256 307 5.8E-16 T 11-10-2018 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 AYJ52_01935 decd0c5990095008c2738aa92856b707 310 Gene3D G3DSA:3.90.550.10 25 271 3.2E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_01935 decd0c5990095008c2738aa92856b707 310 SUPERFAMILY SSF53448 25 270 7.31E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_01935 decd0c5990095008c2738aa92856b707 310 Pfam PF01501 Glycosyl transferase family 8 26 248 6.2E-37 T 11-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 AYJ52_09830 c7e48ca1c5233c25b13a22a58ed11a93 347 SUPERFAMILY SSF161070 27 343 2.22E-11 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AYJ52_09875 29cc4663cc720ce6b65b7501a53e6cef 157 Pfam PF02566 OsmC-like protein 53 150 3.1E-12 T 11-10-2018 IPR003718 OsmC/Ohr family AYJ52_09875 29cc4663cc720ce6b65b7501a53e6cef 157 Gene3D G3DSA:3.30.300.20 1 151 1.6E-47 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_09875 29cc4663cc720ce6b65b7501a53e6cef 157 SUPERFAMILY SSF82784 4 150 5.63E-40 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AYJ52_18340 965b56ccc3272db1119b827dcee4c181 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 431 105.603 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AYJ52_18340 965b56ccc3272db1119b827dcee4c181 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 275 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_18340 965b56ccc3272db1119b827dcee4c181 432 Gene3D G3DSA:3.40.640.10 72 322 6.1E-176 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_18340 965b56ccc3272db1119b827dcee4c181 432 SUPERFAMILY SSF53383 5 430 4.96E-130 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_18340 965b56ccc3272db1119b827dcee4c181 432 Gene3D G3DSA:3.90.1150.10 10 424 6.1E-176 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_18340 965b56ccc3272db1119b827dcee4c181 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 430 4.2E-189 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AYJ52_18340 965b56ccc3272db1119b827dcee4c181 432 Pfam PF00202 Aminotransferase class-III 35 401 1.3E-76 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_06375 ff7ed12200d86f1f6c2509c712320eff 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 345 6.1E-93 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AYJ52_06375 ff7ed12200d86f1f6c2509c712320eff 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 347 4.5E-75 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AYJ52_06415 c08f2654bd75d66873b15c46e2a30e4c 379 TIGRFAM TIGR00260 thrC: threonine synthase 11 350 4.4E-91 T 11-10-2018 IPR004450 Threonine synthase-like AYJ52_06415 c08f2654bd75d66873b15c46e2a30e4c 379 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 57 70 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AYJ52_06415 c08f2654bd75d66873b15c46e2a30e4c 379 SUPERFAMILY SSF53686 11 376 2.49E-101 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_06415 c08f2654bd75d66873b15c46e2a30e4c 379 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 343 1.2E-64 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_06415 c08f2654bd75d66873b15c46e2a30e4c 379 Gene3D G3DSA:3.40.50.1100 17 350 1.5E-115 T 11-10-2018 AYJ52_06415 c08f2654bd75d66873b15c46e2a30e4c 379 Gene3D G3DSA:3.40.50.1100 65 161 1.5E-115 T 11-10-2018 AYJ52_06415 c08f2654bd75d66873b15c46e2a30e4c 379 PIRSF PIRSF038945 1 375 4.2E-151 T 11-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 AYJ52_13070 ded8307f5b5e0dfb40cbcb63ea8f833c 247 SUPERFAMILY SSF52540 3 230 2.9E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13070 ded8307f5b5e0dfb40cbcb63ea8f833c 247 PIRSF PIRSF039085 1 245 2.7E-99 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AYJ52_13070 ded8307f5b5e0dfb40cbcb63ea8f833c 247 Pfam PF00005 ABC transporter 20 167 3.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_13070 ded8307f5b5e0dfb40cbcb63ea8f833c 247 SMART SM00382 28 215 7.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_13070 ded8307f5b5e0dfb40cbcb63ea8f833c 247 Gene3D G3DSA:3.40.50.300 3 243 2.2E-68 T 11-10-2018 AYJ52_13070 ded8307f5b5e0dfb40cbcb63ea8f833c 247 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_03145 fd7bdde49e33f42be5f81272382109df 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 1.1E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03145 fd7bdde49e33f42be5f81272382109df 157 Pfam PF12019 Type II transport protein GspH 47 137 1.8E-4 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AYJ52_03145 fd7bdde49e33f42be5f81272382109df 157 Gene3D G3DSA:3.30.700.10 10 144 3.0E-15 T 11-10-2018 AYJ52_03145 fd7bdde49e33f42be5f81272382109df 157 SUPERFAMILY SSF54523 10 117 3.85E-15 T 11-10-2018 AYJ52_03145 fd7bdde49e33f42be5f81272382109df 157 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 29 3.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_19695 ae247b2e593a56c4f9a166a29d386680 257 Gene3D G3DSA:3.40.710.10 7 254 3.8E-85 T 11-10-2018 AYJ52_19695 ae247b2e593a56c4f9a166a29d386680 257 ProSitePatterns PS00337 Beta-lactamase class-D active site. 58 68 - T 11-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 AYJ52_19695 ae247b2e593a56c4f9a166a29d386680 257 Pfam PF00905 Penicillin binding protein transpeptidase domain 44 242 2.2E-32 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AYJ52_19695 ae247b2e593a56c4f9a166a29d386680 257 SUPERFAMILY SSF56601 32 249 5.98E-33 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_06560 9b276b6b5a6e8a26558f8d2bf887e7d1 247 Pfam PF01203 Type II secretion system (T2SS), protein N 41 211 9.4E-14 T 11-10-2018 IPR022792 Type II secretion system, protein N AYJ52_07600 34b48be64a6f8867b5db16c866be11f9 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 45.51 T 11-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 AYJ52_07600 34b48be64a6f8867b5db16c866be11f9 227 SUPERFAMILY SSF51197 4 178 1.37E-5 T 11-10-2018 AYJ52_07600 34b48be64a6f8867b5db16c866be11f9 227 SMART SM00702 2 177 2.0E-21 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AYJ52_07600 34b48be64a6f8867b5db16c866be11f9 227 Gene3D G3DSA:2.60.120.620 1 178 2.0E-43 T 11-10-2018 AYJ52_07600 34b48be64a6f8867b5db16c866be11f9 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 1.3E-12 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AYJ52_07600 34b48be64a6f8867b5db16c866be11f9 227 Gene3D G3DSA:4.10.860.20 180 227 1.9E-21 T 11-10-2018 AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 PIRSF PIRSF006288 10 884 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 Pfam PF01909 Nucleotidyltransferase domain 69 108 4.9E-5 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 31 877 1.4E-266 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 SUPERFAMILY SSF109604 425 548 3.56E-13 T 11-10-2018 AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 Pfam PF01966 HD domain 492 586 2.7E-8 T 11-10-2018 IPR006674 HD domain AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 SUPERFAMILY SSF55021 809 861 3.58E-9 T 11-10-2018 AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 Pfam PF08335 GlnD PII-uridylyltransferase 175 317 1.2E-36 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 SMART SM00471 453 600 2.0E-5 T 11-10-2018 IPR003607 HD/PDEase domain AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 SUPERFAMILY SSF81593 190 312 6.28E-9 T 11-10-2018 AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 Gene3D G3DSA:1.10.3210.10 444 584 8.7E-10 T 11-10-2018 AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 887 286.009 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AYJ52_12955 83a207886499e4ca0434aad44dbe17f4 887 SUPERFAMILY SSF81301 37 166 2.32E-16 T 11-10-2018 AYJ52_13085 308526a5a0b613729d0bce9ba4352b6a 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 6.4E-97 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_13085 308526a5a0b613729d0bce9ba4352b6a 249 SUPERFAMILY SSF75625 3 246 6.15E-93 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_13085 308526a5a0b613729d0bce9ba4352b6a 249 Pfam PF01709 Transcriptional regulator 5 237 1.2E-92 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_13085 308526a5a0b613729d0bce9ba4352b6a 249 Gene3D G3DSA:3.30.70.980 130 204 2.7E-52 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_13085 308526a5a0b613729d0bce9ba4352b6a 249 Gene3D G3DSA:3.30.70.980 85 236 2.7E-52 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_13085 308526a5a0b613729d0bce9ba4352b6a 249 Gene3D G3DSA:1.10.10.200 1 81 4.0E-35 T 11-10-2018 IPR017856 Integrase-like, N-terminal AYJ52_13085 308526a5a0b613729d0bce9ba4352b6a 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.112 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_00245 724706d8d0bd852d5a08984a74c8c05d 385 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 8.1E-145 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AYJ52_00245 724706d8d0bd852d5a08984a74c8c05d 385 PIRSF PIRSF006078 1 378 3.1E-133 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AYJ52_00245 724706d8d0bd852d5a08984a74c8c05d 385 SUPERFAMILY SSF110738 1 375 1.23E-131 T 11-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 AYJ52_00245 724706d8d0bd852d5a08984a74c8c05d 385 Pfam PF02595 Glycerate kinase family 3 374 3.0E-141 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AYJ52_00245 724706d8d0bd852d5a08984a74c8c05d 385 Gene3D G3DSA:3.40.50.10350 1 362 4.0E-137 T 11-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold AYJ52_00245 724706d8d0bd852d5a08984a74c8c05d 385 Gene3D G3DSA:3.90.1510.10 42 276 4.0E-137 T 11-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 AYJ52_05520 ec041ed0285adf539db3ec2ee5a60627 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 3.3E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05520 ec041ed0285adf539db3ec2ee5a60627 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 3.3E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05520 ec041ed0285adf539db3ec2ee5a60627 194 Gene3D G3DSA:1.10.357.10 67 194 3.0E-26 T 11-10-2018 AYJ52_05520 ec041ed0285adf539db3ec2ee5a60627 194 Pfam PF16925 Bacterial transcriptional repressor C-terminal 100 166 1.2E-7 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AYJ52_05520 ec041ed0285adf539db3ec2ee5a60627 194 Gene3D G3DSA:1.10.10.60 1 63 3.4E-24 T 11-10-2018 AYJ52_05520 ec041ed0285adf539db3ec2ee5a60627 194 SUPERFAMILY SSF46689 4 61 2.36E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_05520 ec041ed0285adf539db3ec2ee5a60627 194 SUPERFAMILY SSF48498 77 191 1.72E-22 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_05520 ec041ed0285adf539db3ec2ee5a60627 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 4.3E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_11515 29daba24b2f30f4c42ea9bceee8df210 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 190 4.2E-40 T 11-10-2018 AYJ52_11515 29daba24b2f30f4c42ea9bceee8df210 224 SUPERFAMILY SSF56784 1 217 2.67E-42 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_11515 29daba24b2f30f4c42ea9bceee8df210 224 Gene3D G3DSA:1.10.150.520 16 91 8.9E-50 T 11-10-2018 AYJ52_11515 29daba24b2f30f4c42ea9bceee8df210 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 105 185 1.1E-17 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_11515 29daba24b2f30f4c42ea9bceee8df210 224 Gene3D G3DSA:3.40.50.1000 4 211 8.9E-50 T 11-10-2018 IPR023214 HAD superfamily AYJ52_11515 29daba24b2f30f4c42ea9bceee8df210 224 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 92 192 2.3E-16 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AYJ52_11515 29daba24b2f30f4c42ea9bceee8df210 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 190 4.2E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_16115 1186db553f06434db5d5af84ab093fb4 329 ProSitePatterns PS00958 Transaldolase active site. 130 147 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AYJ52_16115 1186db553f06434db5d5af84ab093fb4 329 ProSitePatterns PS01054 Transaldolase signature 1. 32 40 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AYJ52_16115 1186db553f06434db5d5af84ab093fb4 329 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 314 3.8E-91 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AYJ52_16115 1186db553f06434db5d5af84ab093fb4 329 Gene3D G3DSA:3.20.20.70 2 326 1.2E-122 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_16115 1186db553f06434db5d5af84ab093fb4 329 SUPERFAMILY SSF51569 4 319 2.09E-101 T 11-10-2018 AYJ52_16115 1186db553f06434db5d5af84ab093fb4 329 TIGRFAM TIGR00874 talAB: transaldolase 5 318 1.2E-127 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AYJ52_01720 cc1587984307a82241e3b8bf4bff1d19 711 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 597 5.2E-16 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_01720 cc1587984307a82241e3b8bf4bff1d19 711 SUPERFAMILY SSF52096 1 298 5.18E-60 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_01720 cc1587984307a82241e3b8bf4bff1d19 711 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.3E-59 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AYJ52_01720 cc1587984307a82241e3b8bf4bff1d19 711 SUPERFAMILY SSF48179 496 634 9.35E-21 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_01720 cc1587984307a82241e3b8bf4bff1d19 711 Gene3D G3DSA:3.40.50.720 315 497 4.3E-65 T 11-10-2018 AYJ52_01720 cc1587984307a82241e3b8bf4bff1d19 711 SUPERFAMILY SSF48179 618 708 3.06E-17 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_01720 cc1587984307a82241e3b8bf4bff1d19 711 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 202 1.5E-30 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_01720 cc1587984307a82241e3b8bf4bff1d19 711 Gene3D G3DSA:1.10.1040.50 498 701 1.7E-56 T 11-10-2018 AYJ52_01720 cc1587984307a82241e3b8bf4bff1d19 711 SUPERFAMILY SSF51735 314 495 1.78E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_01720 cc1587984307a82241e3b8bf4bff1d19 711 Gene3D G3DSA:3.90.226.10 1 313 3.2E-97 T 11-10-2018 AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 PIRSF PIRSF039144 1 112 7.4E-55 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 83 103 2.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 23 41 2.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 52 75 2.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 PRINTS PR00340 P-II protein signature 2 17 2.7E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 Gene3D G3DSA:3.30.70.120 1 112 9.6E-47 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.2E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 SUPERFAMILY SSF54913 1 112 4.45E-46 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AYJ52_06325 22469da245ee0ac210dcf1e38fbd14d0 112 SMART SM00938 4 105 2.5E-66 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AYJ52_06810 2de99a0ef7b9b8b1ea8f96ea5f9297fd 333 SUPERFAMILY SSF111369 126 257 1.24E-7 T 11-10-2018 AYJ52_06810 2de99a0ef7b9b8b1ea8f96ea5f9297fd 333 Pfam PF13533 Biotin-lipoyl like 48 96 2.9E-12 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AYJ52_06810 2de99a0ef7b9b8b1ea8f96ea5f9297fd 333 Gene3D G3DSA:2.40.30.170 213 333 3.6E-25 T 11-10-2018 AYJ52_06810 2de99a0ef7b9b8b1ea8f96ea5f9297fd 333 Gene3D G3DSA:2.40.50.100 48 85 2.0E-12 T 11-10-2018 AYJ52_06810 2de99a0ef7b9b8b1ea8f96ea5f9297fd 333 Gene3D G3DSA:1.10.287.470 109 188 5.7E-7 T 11-10-2018 AYJ52_06810 2de99a0ef7b9b8b1ea8f96ea5f9297fd 333 Pfam PF13437 HlyD family secretion protein 200 281 2.8E-11 T 11-10-2018 AYJ52_06810 2de99a0ef7b9b8b1ea8f96ea5f9297fd 333 SUPERFAMILY SSF111369 47 120 7.19E-10 T 11-10-2018 AYJ52_06810 2de99a0ef7b9b8b1ea8f96ea5f9297fd 333 Gene3D G3DSA:1.10.287.470 86 108 2.0E-12 T 11-10-2018 AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 Gene3D G3DSA:1.10.3170.10 162 380 2.0E-74 T 11-10-2018 AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 Gene3D G3DSA:3.40.50.300 13 470 2.0E-74 T 11-10-2018 AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 Gene3D G3DSA:1.10.486.10 611 757 2.6E-71 T 11-10-2018 AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 Pfam PF12705 PD-(D/E)XK nuclease superfamily 986 1196 5.5E-6 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 SUPERFAMILY SSF52980 923 1223 2.04E-61 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 Gene3D G3DSA:3.40.50.300 484 864 2.6E-71 T 11-10-2018 AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1224 15.74 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 471 3.1E-48 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 Pfam PF13361 UvrD-like helicase C-terminal domain 479 857 4.6E-26 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 Gene3D G3DSA:3.90.320.10 917 1229 2.4E-70 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AYJ52_07005 3351664c9bdbd3813cbbf5580a18e030 1232 SUPERFAMILY SSF52540 15 860 1.07E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07675 bf0b961cfde5f9f0a76798fe971e10bc 421 PIRSF PIRSF000151 1 421 1.2E-180 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AYJ52_07675 bf0b961cfde5f9f0a76798fe971e10bc 421 Pfam PF00171 Aldehyde dehydrogenase family 9 289 2.0E-17 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_07675 bf0b961cfde5f9f0a76798fe971e10bc 421 Pfam PF00171 Aldehyde dehydrogenase family 313 377 2.0E-6 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_07675 bf0b961cfde5f9f0a76798fe971e10bc 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 420 41.483 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AYJ52_07675 bf0b961cfde5f9f0a76798fe971e10bc 421 SUPERFAMILY SSF53720 8 420 9.95E-121 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_07675 bf0b961cfde5f9f0a76798fe971e10bc 421 Gene3D G3DSA:3.40.309.10 229 378 2.6E-165 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_07675 bf0b961cfde5f9f0a76798fe971e10bc 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 410 3.5E-152 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AYJ52_07675 bf0b961cfde5f9f0a76798fe971e10bc 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 348 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AYJ52_07675 bf0b961cfde5f9f0a76798fe971e10bc 421 Gene3D G3DSA:3.40.605.10 15 417 2.6E-165 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_14575 282f5db92d96b055e7540b91d410feaa 255 Pfam PF00293 NUDIX domain 25 148 3.2E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_14575 282f5db92d96b055e7540b91d410feaa 255 SUPERFAMILY SSF46785 164 234 5.44E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14575 282f5db92d96b055e7540b91d410feaa 255 Gene3D G3DSA:3.90.79.10 21 164 4.8E-34 T 11-10-2018 AYJ52_14575 282f5db92d96b055e7540b91d410feaa 255 Gene3D G3DSA:1.10.10.10 165 239 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14575 282f5db92d96b055e7540b91d410feaa 255 SUPERFAMILY SSF55811 17 159 7.45E-28 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 SMART SM00917 422 550 3.2E-26 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 Gene3D G3DSA:3.20.20.70 10 376 2.2E-153 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 549 9.7E-24 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 Pfam PF00682 HMGL-like 33 313 7.5E-76 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 551 52.222 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 SUPERFAMILY SSF89000 388 438 1.65E-15 T 11-10-2018 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 Gene3D G3DSA:3.30.160.270 377 549 1.9E-52 T 11-10-2018 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 SUPERFAMILY SSF110921 442 549 4.45E-29 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 SUPERFAMILY SSF51569 22 330 8.61E-99 T 11-10-2018 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AYJ52_07595 bccbeca199fc077b4fd549df70b61b4a 565 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 550 7.3E-229 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AYJ52_11055 d33b3264a95f20a0a19634d940048f0d 732 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 2.0E-98 T 11-10-2018 IPR003776 YcaO-like domain AYJ52_11055 d33b3264a95f20a0a19634d940048f0d 732 SUPERFAMILY SSF82784 1 126 1.19E-20 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AYJ52_11055 d33b3264a95f20a0a19634d940048f0d 732 Pfam PF02566 OsmC-like protein 32 126 5.1E-10 T 11-10-2018 IPR003718 OsmC/Ohr family AYJ52_11055 d33b3264a95f20a0a19634d940048f0d 732 Gene3D G3DSA:3.30.300.20 2 128 1.7E-16 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_11055 d33b3264a95f20a0a19634d940048f0d 732 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 728 0.0 T 11-10-2018 IPR019938 YcaO domain protein AYJ52_11055 d33b3264a95f20a0a19634d940048f0d 732 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 4.5E-71 T 11-10-2018 IPR003776 YcaO-like domain AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 Gene3D G3DSA:3.40.50.1170 25 240 2.9E-87 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 109 119 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 27 355 7.0E-114 T 11-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 SUPERFAMILY SSF53774 26 354 1.27E-93 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 Gene3D G3DSA:3.40.50.40 241 355 9.8E-34 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 SMART SM00870 27 349 1.6E-125 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 Pfam PF00710 Asparaginase, N-terminal 27 218 8.0E-52 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 PIRSF PIRSF500176 24 355 8.4E-84 T 11-10-2018 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 PIRSF PIRSF001220 22 355 1.7E-90 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 PRINTS PR00139 Asparaginase/glutaminase family signature 108 126 7.7E-21 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 PRINTS PR00139 Asparaginase/glutaminase family signature 28 39 7.7E-21 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 PRINTS PR00139 Asparaginase/glutaminase family signature 289 307 7.7E-21 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AYJ52_12915 128b653f65b6a813e153f130e536fdbb 355 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 30 38 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AYJ52_09995 fb39d6e27c929fcc3962cbfe52b78d5d 1057 SUPERFAMILY SSF56935 169 1057 3.66E-66 T 11-10-2018 AYJ52_09995 fb39d6e27c929fcc3962cbfe52b78d5d 1057 SMART SM00965 70 120 6.8E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AYJ52_09995 fb39d6e27c929fcc3962cbfe52b78d5d 1057 Pfam PF07715 TonB-dependent Receptor Plug Domain 177 276 1.3E-11 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_09995 fb39d6e27c929fcc3962cbfe52b78d5d 1057 Gene3D G3DSA:3.55.50.30 48 118 1.1E-20 T 11-10-2018 AYJ52_09995 fb39d6e27c929fcc3962cbfe52b78d5d 1057 Gene3D G3DSA:2.170.130.10 166 294 3.3E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_09995 fb39d6e27c929fcc3962cbfe52b78d5d 1057 Pfam PF07660 Secretin and TonB N terminus short domain 71 120 1.2E-8 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AYJ52_09995 fb39d6e27c929fcc3962cbfe52b78d5d 1057 Pfam PF00593 TonB dependent receptor 492 1053 1.8E-23 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 Gene3D G3DSA:3.40.50.80 97 216 4.0E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 Gene3D G3DSA:3.10.20.30 218 314 8.9E-24 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 231 305 1.9E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 SUPERFAMILY SSF63380 2 95 6.41E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 47 61 1.8E-50 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 107 126 1.8E-50 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 184 192 1.8E-50 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 25 35 1.8E-50 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 132 141 1.8E-50 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 35 47 1.8E-50 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 71 85 1.8E-50 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 PRINTS PR00409 Phthalate dioxygenase reductase family signature 85 99 1.8E-50 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 SUPERFAMILY SSF52343 93 222 3.01E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 Gene3D G3DSA:2.40.30.10 1 96 3.2E-26 T 11-10-2018 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 SUPERFAMILY SSF54292 208 313 1.57E-25 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_11020 4035b01ebc1cf52dee47b3a6228c41b9 314 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 263 271 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AYJ52_07490 c084e0a6c059590a2ebfdeb5f8e76160 249 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 185 245 3.4E-12 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AYJ52_07490 c084e0a6c059590a2ebfdeb5f8e76160 249 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 187 245 1.8E-11 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AYJ52_07490 c084e0a6c059590a2ebfdeb5f8e76160 249 Gene3D G3DSA:3.30.1150.10 169 247 4.2E-10 T 11-10-2018 AYJ52_07490 c084e0a6c059590a2ebfdeb5f8e76160 249 SUPERFAMILY SSF74653 149 249 5.23E-14 T 11-10-2018 AYJ52_10405 931e04fdbd921f77c625f5532e432f01 54 PRINTS PR00163 Rubredoxin signature 3 19 8.8E-11 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 AYJ52_10405 931e04fdbd921f77c625f5532e432f01 54 PRINTS PR00163 Rubredoxin signature 33 49 8.8E-11 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 AYJ52_10405 931e04fdbd921f77c625f5532e432f01 54 Gene3D G3DSA:2.20.28.10 1 54 1.7E-29 T 11-10-2018 AYJ52_10405 931e04fdbd921f77c625f5532e432f01 54 SUPERFAMILY SSF57802 1 53 1.65E-23 T 11-10-2018 AYJ52_10405 931e04fdbd921f77c625f5532e432f01 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 AYJ52_10405 931e04fdbd921f77c625f5532e432f01 54 PIRSF PIRSF000071 1 54 3.3E-26 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 AYJ52_10405 931e04fdbd921f77c625f5532e432f01 54 Pfam PF00301 Rubredoxin 3 49 3.2E-25 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 AYJ52_11950 143b727efa572fe00676148edbfe970c 387 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AYJ52_11950 143b727efa572fe00676148edbfe970c 387 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.9E-10 T 11-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated AYJ52_11950 143b727efa572fe00676148edbfe970c 387 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 150 7.3E-30 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AYJ52_11950 143b727efa572fe00676148edbfe970c 387 Gene3D G3DSA:3.90.180.10 9 374 1.3E-129 T 11-10-2018 AYJ52_11950 143b727efa572fe00676148edbfe970c 387 SUPERFAMILY SSF50129 1 186 1.26E-59 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_11950 143b727efa572fe00676148edbfe970c 387 SUPERFAMILY SSF51735 164 349 5.52E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_11950 143b727efa572fe00676148edbfe970c 387 Gene3D G3DSA:3.40.50.720 178 338 1.3E-129 T 11-10-2018 AYJ52_11950 143b727efa572fe00676148edbfe970c 387 SMART SM00829 8 385 0.0025 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 149 1.2E-11 T 11-10-2018 AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 Pfam PF08676 MutL C terminal dimerisation domain 457 605 1.9E-44 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 Gene3D G3DSA:3.30.230.10 226 338 3.0E-35 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 SMART SM01340 221 339 2.5E-51 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 SMART SM00853 461 605 2.7E-46 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 222 338 6.5E-36 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 Gene3D G3DSA:3.30.1370.100 505 600 1.3E-53 T 11-10-2018 AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 Gene3D G3DSA:3.30.565.10 10 224 1.1E-64 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 SUPERFAMILY SSF118116 456 647 1.44E-57 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 SUPERFAMILY SSF55874 8 211 3.01E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 Gene3D G3DSA:2.30.42.20 463 642 1.3E-53 T 11-10-2018 AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 9 645 26.717 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 10 319 3.7E-95 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 SUPERFAMILY SSF54211 202 339 1.1E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_16435 4edd155cce7ea4f07470ddd354b11d0b 649 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 101 107 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site AYJ52_05255 70f77f3c313871d545944011f547c50a 722 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 2 718 5.0E-284 T 11-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AYJ52_05255 70f77f3c313871d545944011f547c50a 722 Pfam PF05506 Domain of unknown function (DUF756) 623 704 2.7E-15 T 11-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AYJ52_05255 70f77f3c313871d545944011f547c50a 722 Pfam PF05506 Domain of unknown function (DUF756) 526 612 7.8E-24 T 11-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AYJ52_05255 70f77f3c313871d545944011f547c50a 722 Pfam PF04185 Phosphoesterase family 45 454 1.7E-112 T 11-10-2018 IPR007312 Phosphoesterase GO:0016788 AYJ52_05255 70f77f3c313871d545944011f547c50a 722 Gene3D G3DSA:3.40.720.10 299 502 9.1E-51 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AYJ52_05255 70f77f3c313871d545944011f547c50a 722 Gene3D G3DSA:3.40.720.10 34 207 5.7E-30 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AYJ52_18015 974d4e39314f90879f08da29de4547be 305 SUPERFAMILY SSF46785 7 86 2.08E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_18015 974d4e39314f90879f08da29de4547be 305 Gene3D G3DSA:3.40.190.10 174 270 1.8E-23 T 11-10-2018 AYJ52_18015 974d4e39314f90879f08da29de4547be 305 Pfam PF03466 LysR substrate binding domain 99 297 3.1E-8 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_18015 974d4e39314f90879f08da29de4547be 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.1E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18015 974d4e39314f90879f08da29de4547be 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.1E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18015 974d4e39314f90879f08da29de4547be 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.1E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18015 974d4e39314f90879f08da29de4547be 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 3.3E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18015 974d4e39314f90879f08da29de4547be 305 Gene3D G3DSA:1.10.10.10 2 90 1.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_18015 974d4e39314f90879f08da29de4547be 305 Gene3D G3DSA:3.40.190.10 99 287 1.8E-23 T 11-10-2018 AYJ52_18015 974d4e39314f90879f08da29de4547be 305 SUPERFAMILY SSF53850 99 296 5.25E-18 T 11-10-2018 AYJ52_04180 e4a62c643858e0d4f588e35db148e07c 116 SUPERFAMILY SSF52833 1 113 4.48E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_04180 e4a62c643858e0d4f588e35db148e07c 116 Pfam PF03960 ArsC family 5 113 1.2E-14 T 11-10-2018 IPR006660 Arsenate reductase-like AYJ52_04180 e4a62c643858e0d4f588e35db148e07c 116 Gene3D G3DSA:3.40.30.10 1 115 1.5E-39 T 11-10-2018 AYJ52_04180 e4a62c643858e0d4f588e35db148e07c 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 113 2.5E-26 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR AYJ52_12450 3c16e6fc66fe6ab1427091b626527a91 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 467 542 5.8E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_12450 3c16e6fc66fe6ab1427091b626527a91 564 Gene3D G3DSA:3.40.50.12780 6 448 3.5E-122 T 11-10-2018 AYJ52_12450 3c16e6fc66fe6ab1427091b626527a91 564 Pfam PF00501 AMP-binding enzyme 26 458 9.7E-110 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_12450 3c16e6fc66fe6ab1427091b626527a91 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_12450 3c16e6fc66fe6ab1427091b626527a91 564 SUPERFAMILY SSF56801 16 553 1.96E-153 T 11-10-2018 AYJ52_12450 3c16e6fc66fe6ab1427091b626527a91 564 Gene3D G3DSA:3.30.300.30 452 557 1.6E-29 T 11-10-2018 AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 Pfam PF13721 SecD export protein N-terminal TM region 2 102 8.9E-35 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 618 3.1E-134 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 Gene3D G3DSA:3.30.70.3400 221 455 2.2E-47 T 11-10-2018 AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 632 50.336 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 SUPERFAMILY SSF82866 428 626 3.01E-45 T 11-10-2018 AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 8.4E-8 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 PRINTS PR00702 Acriflavin resistance protein family signature 520 544 8.4E-8 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 PRINTS PR00702 Acriflavin resistance protein family signature 595 618 8.4E-8 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 Pfam PF02355 Protein export membrane protein 455 621 9.7E-19 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 356 611 2.0E-71 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 Pfam PF07549 SecD/SecF GG Motif 115 139 2.6E-7 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 Gene3D G3DSA:1.20.1640.10 468 622 4.8E-13 T 11-10-2018 AYJ52_02035 3faadef8ce20479ac3a8c7c8414e770c 633 Gene3D G3DSA:3.30.1360.200 279 449 2.2E-47 T 11-10-2018 AYJ52_04080 c6c1edc7fcfe5bc3079c7c80de21b26a 723 Gene3D G3DSA:2.170.130.10 53 182 1.3E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_04080 c6c1edc7fcfe5bc3079c7c80de21b26a 723 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 721 4.5E-95 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_04080 c6c1edc7fcfe5bc3079c7c80de21b26a 723 Pfam PF00593 TonB dependent receptor 255 722 6.0E-52 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_04080 c6c1edc7fcfe5bc3079c7c80de21b26a 723 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 171 2.5E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_04080 c6c1edc7fcfe5bc3079c7c80de21b26a 723 SUPERFAMILY SSF56935 35 723 4.0E-124 T 11-10-2018 AYJ52_04080 c6c1edc7fcfe5bc3079c7c80de21b26a 723 Gene3D G3DSA:2.40.170.20 183 723 7.7E-121 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_07560 38a8820c77e9526873c1b820c9a2e98c 145 Pfam PF02416 mttA/Hcf106 family 4 52 9.4E-8 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AYJ52_07560 38a8820c77e9526873c1b820c9a2e98c 145 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.1E-17 T 11-10-2018 AYJ52_07560 38a8820c77e9526873c1b820c9a2e98c 145 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.1E-17 T 11-10-2018 AYJ52_07560 38a8820c77e9526873c1b820c9a2e98c 145 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.1E-17 T 11-10-2018 AYJ52_07560 38a8820c77e9526873c1b820c9a2e98c 145 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 139 14.736 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AYJ52_07560 38a8820c77e9526873c1b820c9a2e98c 145 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 79 2.8E-20 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AYJ52_07685 8c79c6b8177f22a7650a508dd2f6a8a3 280 Gene3D G3DSA:3.40.50.150 30 267 2.3E-21 T 11-10-2018 AYJ52_07685 8c79c6b8177f22a7650a508dd2f6a8a3 280 Pfam PF04072 Leucine carboxyl methyltransferase 58 181 3.3E-11 T 11-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 AYJ52_07685 8c79c6b8177f22a7650a508dd2f6a8a3 280 SUPERFAMILY SSF53335 46 270 9.68E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 Pfam PF00676 Dehydrogenase E1 component 212 515 8.8E-52 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 SUPERFAMILY SSF52518 575 793 3.14E-49 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 Gene3D G3DSA:3.40.50.970 165 525 2.8E-148 T 11-10-2018 AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 SUPERFAMILY SSF52518 119 546 3.87E-89 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 2.4E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 Gene3D G3DSA:3.40.50.11610 723 932 3.6E-165 T 11-10-2018 AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 14 50 4.0E-14 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 935 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 Gene3D G3DSA:1.10.287.1150 82 164 3.1E-26 T 11-10-2018 AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 Gene3D G3DSA:3.40.50.12470 556 802 3.6E-165 T 11-10-2018 AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 SMART SM00861 593 786 3.9E-60 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 935 3.5E-50 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AYJ52_00745 7e4d7dde261e766dce64a72f94458deb 946 PIRSF PIRSF000157 1 937 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AYJ52_05590 4639235a11d984c572a60d860254931f 476 PIRSF PIRSF006060 3 475 1.4E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_05590 4639235a11d984c572a60d860254931f 476 Gene3D G3DSA:1.20.1740.10 14 475 4.4E-64 T 11-10-2018 AYJ52_05590 4639235a11d984c572a60d860254931f 476 Pfam PF00324 Amino acid permease 24 471 1.9E-105 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_05590 4639235a11d984c572a60d860254931f 476 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_17785 6b680e473a446dbaadb42e33fcf3cece 383 ProSitePatterns PS00336 Beta-lactamase class-C active site. 84 91 - T 11-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 AYJ52_17785 6b680e473a446dbaadb42e33fcf3cece 383 Gene3D G3DSA:3.40.710.10 23 383 8.3E-146 T 11-10-2018 AYJ52_17785 6b680e473a446dbaadb42e33fcf3cece 383 Pfam PF00144 Beta-lactamase 36 378 6.2E-67 T 11-10-2018 IPR001466 Beta-lactamase-related AYJ52_17785 6b680e473a446dbaadb42e33fcf3cece 383 SUPERFAMILY SSF56601 30 379 1.06E-87 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_06200 55c9e4c1e781005efb3e67b1dfe21da1 62 Pfam PF00403 Heavy-metal-associated domain 3 59 3.5E-11 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AYJ52_06200 55c9e4c1e781005efb3e67b1dfe21da1 62 Gene3D G3DSA:3.30.70.100 1 61 3.0E-17 T 11-10-2018 AYJ52_06200 55c9e4c1e781005efb3e67b1dfe21da1 62 SUPERFAMILY SSF55008 2 61 2.88E-13 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 SUPERFAMILY SSF118215 6 410 2.75E-110 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 Pfam PF00375 Sodium:dicarboxylate symporter family 6 408 3.9E-105 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 Gene3D G3DSA:1.10.3860.10 1 420 1.4E-115 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 PRINTS PR00173 Glutamate-aspartate symporter signature 201 220 8.1E-38 T 11-10-2018 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 8.1E-38 T 11-10-2018 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 PRINTS PR00173 Glutamate-aspartate symporter signature 336 355 8.1E-38 T 11-10-2018 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 8.1E-38 T 11-10-2018 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.1E-38 T 11-10-2018 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 PRINTS PR00173 Glutamate-aspartate symporter signature 363 383 8.1E-38 T 11-10-2018 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.1E-38 T 11-10-2018 AYJ52_12920 80497905e9829a5c12f258309e7a7f24 435 PRINTS PR00173 Glutamate-aspartate symporter signature 301 327 8.1E-38 T 11-10-2018 AYJ52_08470 a4d00357d74c3aa9c26680c3e87049a0 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 7 266 2.1E-96 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AYJ52_08470 a4d00357d74c3aa9c26680c3e87049a0 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 265 39.334 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AYJ52_08470 a4d00357d74c3aa9c26680c3e87049a0 269 PIRSF PIRSF000388 1 268 6.3E-92 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AYJ52_08470 a4d00357d74c3aa9c26680c3e87049a0 269 SUPERFAMILY SSF51621 2 265 1.06E-94 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AYJ52_08470 a4d00357d74c3aa9c26680c3e87049a0 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 260 4.1E-99 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AYJ52_08470 a4d00357d74c3aa9c26680c3e87049a0 269 Gene3D G3DSA:3.20.20.60 1 269 1.0E-97 T 11-10-2018 AYJ52_04285 d643734cc65f6fcb1bda055cae41078c 218 Gene3D G3DSA:1.20.1440.100 16 89 4.9E-13 T 11-10-2018 AYJ52_04285 d643734cc65f6fcb1bda055cae41078c 218 Gene3D G3DSA:3.40.50.1000 5 201 4.9E-13 T 11-10-2018 IPR023214 HAD superfamily AYJ52_04285 d643734cc65f6fcb1bda055cae41078c 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 187 5.6E-14 T 11-10-2018 AYJ52_04285 d643734cc65f6fcb1bda055cae41078c 218 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 11-10-2018 AYJ52_04285 d643734cc65f6fcb1bda055cae41078c 218 SUPERFAMILY SSF56784 1 206 7.07E-13 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_01790 2bfcc93b6ad6ba3db536acfe7ce1d7b5 298 SUPERFAMILY SSF52096 43 296 4.61E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_01790 2bfcc93b6ad6ba3db536acfe7ce1d7b5 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 43 297 2.8E-108 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_01790 2bfcc93b6ad6ba3db536acfe7ce1d7b5 298 Gene3D G3DSA:3.90.226.10 42 297 1.1E-75 T 11-10-2018 AYJ52_01790 2bfcc93b6ad6ba3db536acfe7ce1d7b5 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 178 196 3.4E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_01790 2bfcc93b6ad6ba3db536acfe7ce1d7b5 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 215 232 3.4E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_01790 2bfcc93b6ad6ba3db536acfe7ce1d7b5 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 266 275 3.4E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_01790 2bfcc93b6ad6ba3db536acfe7ce1d7b5 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 244 255 3.4E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_01790 2bfcc93b6ad6ba3db536acfe7ce1d7b5 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 144 158 3.4E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_01790 2bfcc93b6ad6ba3db536acfe7ce1d7b5 298 Pfam PF01039 Carboxyl transferase domain 108 257 7.9E-18 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AYJ52_01790 2bfcc93b6ad6ba3db536acfe7ce1d7b5 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 2 296 35.737 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AYJ52_04235 48b771202e2a39429153f3bee210da47 455 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 20 430 9.7E-108 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AYJ52_04235 48b771202e2a39429153f3bee210da47 455 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 347 367 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AYJ52_04235 48b771202e2a39429153f3bee210da47 455 TIGRFAM TIGR03173 pbuX: xanthine permease 24 432 1.4E-153 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 AYJ52_04235 48b771202e2a39429153f3bee210da47 455 Pfam PF00860 Permease family 20 395 1.1E-88 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 Pfam PF13360 PQQ-like domain 675 783 2.1E-8 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 16 796 1.4E-273 T 11-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 Gene3D G3DSA:2.140.10.10 160 534 3.2E-106 T 11-10-2018 AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 Gene3D G3DSA:2.140.10.10 550 798 9.7E-42 T 11-10-2018 AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 Pfam PF01011 PQQ enzyme repeat 439 466 3.0E-4 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 Pfam PF01011 PQQ enzyme repeat 228 253 1.4E-4 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 SUPERFAMILY SSF50998 164 796 5.36E-141 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 SMART SM00564 720 753 1.6E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 SMART SM00564 406 456 34.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 SMART SM00564 222 253 1.7E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 SMART SM00564 281 312 230.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_14820 55e99485bf79b411934d0476b4b7801d 799 SMART SM00564 337 378 1.1 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_14580 8036641ee2c1b9af460353f55e50049c 497 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 189 479 5.0E-43 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AYJ52_14580 8036641ee2c1b9af460353f55e50049c 497 Gene3D G3DSA:3.20.20.70 154 420 2.0E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_14580 8036641ee2c1b9af460353f55e50049c 497 SUPERFAMILY SSF51690 189 494 3.3E-36 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AYJ52_14580 8036641ee2c1b9af460353f55e50049c 497 PIRSF PIRSF005943 1 497 4.5E-176 T 11-10-2018 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 AYJ52_14975 2d4f28c4030a7710ff2d2dc18d7a5e01 238 Gene3D G3DSA:1.20.120.530 105 236 4.0E-25 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_14975 2d4f28c4030a7710ff2d2dc18d7a5e01 238 SUPERFAMILY SSF46785 8 82 2.72E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14975 2d4f28c4030a7710ff2d2dc18d7a5e01 238 SMART SM00345 19 78 7.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_14975 2d4f28c4030a7710ff2d2dc18d7a5e01 238 SMART SM00895 107 228 5.4E-19 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_14975 2d4f28c4030a7710ff2d2dc18d7a5e01 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.6E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_14975 2d4f28c4030a7710ff2d2dc18d7a5e01 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.6E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_14975 2d4f28c4030a7710ff2d2dc18d7a5e01 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 78 1.5E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_14975 2d4f28c4030a7710ff2d2dc18d7a5e01 238 Gene3D G3DSA:1.10.10.10 11 85 8.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14975 2d4f28c4030a7710ff2d2dc18d7a5e01 238 Pfam PF07729 FCD domain 110 221 3.1E-20 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_14975 2d4f28c4030a7710ff2d2dc18d7a5e01 238 SUPERFAMILY SSF48008 108 229 1.65E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_16050 928bcbad80cfcae7c001503225c43efb 144 SUPERFAMILY SSF54637 10 143 4.23E-35 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_16050 928bcbad80cfcae7c001503225c43efb 144 Pfam PF13279 Thioesterase-like superfamily 21 136 7.5E-13 T 11-10-2018 AYJ52_16050 928bcbad80cfcae7c001503225c43efb 144 Gene3D G3DSA:3.10.129.10 2 142 5.6E-46 T 11-10-2018 AYJ52_02930 d20036a7ed7f1ab44465e1dcf767d9e6 451 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 165 176 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AYJ52_02930 d20036a7ed7f1ab44465e1dcf767d9e6 451 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 387 397 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AYJ52_02930 d20036a7ed7f1ab44465e1dcf767d9e6 451 SUPERFAMILY SSF52743 141 432 1.7E-47 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AYJ52_02930 d20036a7ed7f1ab44465e1dcf767d9e6 451 Pfam PF00082 Subtilase family 160 405 3.0E-19 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AYJ52_02930 d20036a7ed7f1ab44465e1dcf767d9e6 451 Gene3D G3DSA:3.40.50.200 137 434 8.9E-52 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AYJ52_02930 d20036a7ed7f1ab44465e1dcf767d9e6 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 220 7.1E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AYJ52_02930 d20036a7ed7f1ab44465e1dcf767d9e6 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 386 402 7.1E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AYJ52_02930 d20036a7ed7f1ab44465e1dcf767d9e6 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 160 179 7.1E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AYJ52_08345 c522b22809709f54b0c0a9dce5b5cc23 130 Gene3D G3DSA:1.10.1660.10 1 127 3.7E-31 T 11-10-2018 AYJ52_08345 c522b22809709f54b0c0a9dce5b5cc23 130 SUPERFAMILY SSF46955 3 121 8.79E-33 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_08345 c522b22809709f54b0c0a9dce5b5cc23 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 5.2E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_08345 c522b22809709f54b0c0a9dce5b5cc23 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 5.2E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_08345 c522b22809709f54b0c0a9dce5b5cc23 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 5.2E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_08345 c522b22809709f54b0c0a9dce5b5cc23 130 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 3 129 8.9E-58 T 11-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 AYJ52_08345 c522b22809709f54b0c0a9dce5b5cc23 130 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_08345 c522b22809709f54b0c0a9dce5b5cc23 130 Pfam PF13411 MerR HTH family regulatory protein 3 71 4.8E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_08345 c522b22809709f54b0c0a9dce5b5cc23 130 SMART SM00422 3 72 6.6E-25 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_03450 7268c0efafc8d7e9021030e32d01d07a 728 Gene3D G3DSA:3.40.1050.10 513 728 6.4E-55 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AYJ52_03450 7268c0efafc8d7e9021030e32d01d07a 728 Pfam PF00916 Sulfate permease family 13 376 1.7E-56 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AYJ52_03450 7268c0efafc8d7e9021030e32d01d07a 728 SUPERFAMILY SSF53056 508 728 5.89E-51 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AYJ52_03450 7268c0efafc8d7e9021030e32d01d07a 728 Pfam PF00484 Carbonic anhydrase 566 724 5.1E-33 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AYJ52_03450 7268c0efafc8d7e9021030e32d01d07a 728 SMART SM00947 558 728 1.3E-47 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AYJ52_07225 11b1299598eb8072601e7ead5a6e9b41 1107 Pfam PF00575 S1 RNA binding domain 36 116 4.4E-10 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_07225 11b1299598eb8072601e7ead5a6e9b41 1107 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 2.8E-158 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AYJ52_07225 11b1299598eb8072601e7ead5a6e9b41 1107 Pfam PF10150 Ribonuclease E/G family 119 388 3.5E-94 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AYJ52_07225 11b1299598eb8072601e7ead5a6e9b41 1107 Gene3D G3DSA:2.40.50.140 31 123 2.6E-28 T 11-10-2018 AYJ52_07225 11b1299598eb8072601e7ead5a6e9b41 1107 SMART SM00316 37 117 8.8E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_07225 11b1299598eb8072601e7ead5a6e9b41 1107 SUPERFAMILY SSF50249 40 123 1.84E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_07225 11b1299598eb8072601e7ead5a6e9b41 1107 Hamap MF_00970 Ribonuclease E [rne]. 1 1093 36.837 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AYJ52_07225 11b1299598eb8072601e7ead5a6e9b41 1107 Gene3D G3DSA:3.40.1260.20 399 504 1.2E-30 T 11-10-2018 AYJ52_14125 7d7ecf1feb03b6134eceda479294e156 390 Pfam PF00108 Thiolase, N-terminal domain 4 261 3.2E-88 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AYJ52_14125 7d7ecf1feb03b6134eceda479294e156 390 Gene3D G3DSA:3.40.47.10 126 388 2.4E-139 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_14125 7d7ecf1feb03b6134eceda479294e156 390 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AYJ52_14125 7d7ecf1feb03b6134eceda479294e156 390 SUPERFAMILY SSF53901 270 389 3.64E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_14125 7d7ecf1feb03b6134eceda479294e156 390 PIRSF PIRSF000429 1 390 3.4E-111 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_14125 7d7ecf1feb03b6134eceda479294e156 390 SUPERFAMILY SSF53901 4 268 2.88E-77 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_14125 7d7ecf1feb03b6134eceda479294e156 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AYJ52_14125 7d7ecf1feb03b6134eceda479294e156 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 8.7E-129 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_14125 7d7ecf1feb03b6134eceda479294e156 390 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.9E-43 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AYJ52_14125 7d7ecf1feb03b6134eceda479294e156 390 Gene3D G3DSA:3.40.47.10 5 274 2.4E-139 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_15540 581793b3656aab24f05c25d6430116cd 572 Gene3D G3DSA:3.40.50.2300 104 215 1.8E-38 T 11-10-2018 AYJ52_15540 581793b3656aab24f05c25d6430116cd 572 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 224 561 4.8E-133 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AYJ52_15540 581793b3656aab24f05c25d6430116cd 572 SUPERFAMILY SSF52794 115 215 3.31E-35 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AYJ52_15540 581793b3656aab24f05c25d6430116cd 572 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 117 200 3.3E-33 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AYJ52_15540 581793b3656aab24f05c25d6430116cd 572 Pfam PF02378 Phosphotransferase system, EIIC 243 505 2.7E-18 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AYJ52_15540 581793b3656aab24f05c25d6430116cd 572 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 118 203 9.9E-18 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 Gene3D G3DSA:3.40.50.720 2 261 1.9E-61 T 11-10-2018 AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 Pfam PF00106 short chain dehydrogenase 16 205 1.8E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 SUPERFAMILY SSF51735 13 255 1.8E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 3.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 3.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 3.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 3.9E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 6.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 6.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03445 0526b843da3e437c679c5e9a86b62100 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 6.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 ProSitePatterns PS00480 Citrate synthase signature. 267 279 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 SUPERFAMILY SSF48256 19 375 5.36E-122 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 Gene3D G3DSA:1.10.580.10 38 364 4.3E-126 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 17 384 3.1E-152 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 PIRSF PIRSF001369 11 385 9.7E-110 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 Gene3D G3DSA:1.10.230.10 233 331 4.3E-126 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 Pfam PF00285 Citrate synthase, C-terminal domain 18 366 4.5E-114 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 PRINTS PR00143 Citrate synthase signature 185 200 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 PRINTS PR00143 Citrate synthase signature 317 333 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 PRINTS PR00143 Citrate synthase signature 207 235 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 PRINTS PR00143 Citrate synthase signature 260 280 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 PRINTS PR00143 Citrate synthase signature 135 148 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_05415 79afd91df3f2a305915288b42ba08e0c 385 PRINTS PR00143 Citrate synthase signature 337 351 9.1E-37 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AYJ52_07875 98c1eadcb2992c211d524e3f6767eab2 353 Pfam PF03193 RsgA GTPase 114 286 2.6E-51 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AYJ52_07875 98c1eadcb2992c211d524e3f6767eab2 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 92 343 1.0E-70 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AYJ52_07875 98c1eadcb2992c211d524e3f6767eab2 353 Gene3D G3DSA:2.40.50.140 31 116 4.6E-17 T 11-10-2018 AYJ52_07875 98c1eadcb2992c211d524e3f6767eab2 353 SUPERFAMILY SSF52540 128 349 2.18E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07875 98c1eadcb2992c211d524e3f6767eab2 353 Gene3D G3DSA:3.40.50.300 117 285 7.2E-45 T 11-10-2018 AYJ52_07875 98c1eadcb2992c211d524e3f6767eab2 353 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 34 350 33.065 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AYJ52_07875 98c1eadcb2992c211d524e3f6767eab2 353 Gene3D G3DSA:1.10.40.50 286 353 6.7E-21 T 11-10-2018 AYJ52_11325 c23350c736b6e56d7f26886371dcf727 418 Gene3D G3DSA:2.40.160.10 28 418 2.1E-138 T 11-10-2018 IPR023614 Porin domain superfamily AYJ52_11325 c23350c736b6e56d7f26886371dcf727 418 Pfam PF03573 outer membrane porin, OprD family 36 417 2.7E-72 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AYJ52_01185 5b818bbc02101093817fda132ea868cb 730 Gene3D G3DSA:3.40.50.200 262 542 3.5E-23 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AYJ52_01185 5b818bbc02101093817fda132ea868cb 730 Pfam PF00082 Subtilase family 301 537 3.9E-17 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AYJ52_01185 5b818bbc02101093817fda132ea868cb 730 SUPERFAMILY SSF52743 269 548 4.84E-26 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AYJ52_09055 50229862f336dd364c10392f2125a840 183 Pfam PF00534 Glycosyl transferases group 1 12 160 1.4E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AYJ52_09055 50229862f336dd364c10392f2125a840 183 SUPERFAMILY SSF53756 11 181 5.38E-42 T 11-10-2018 AYJ52_09055 50229862f336dd364c10392f2125a840 183 Gene3D G3DSA:3.40.50.2000 10 166 5.2E-41 T 11-10-2018 AYJ52_04045 0636023667c28ab6d897f7106fc93be4 310 Pfam PF03462 PCRF domain 2 165 4.9E-52 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AYJ52_04045 0636023667c28ab6d897f7106fc93be4 310 SUPERFAMILY SSF75620 2 307 7.46E-125 T 11-10-2018 AYJ52_04045 0636023667c28ab6d897f7106fc93be4 310 Gene3D G3DSA:1.20.58.410 1 61 1.8E-10 T 11-10-2018 AYJ52_04045 0636023667c28ab6d897f7106fc93be4 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 2.3E-144 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AYJ52_04045 0636023667c28ab6d897f7106fc93be4 310 Gene3D G3DSA:3.30.70.1660 75 303 8.6E-96 T 11-10-2018 AYJ52_04045 0636023667c28ab6d897f7106fc93be4 310 SMART SM00937 30 140 2.8E-57 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AYJ52_04045 0636023667c28ab6d897f7106fc93be4 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AYJ52_04045 0636023667c28ab6d897f7106fc93be4 310 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 310 33.152 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AYJ52_04045 0636023667c28ab6d897f7106fc93be4 310 Gene3D G3DSA:3.30.160.20 171 266 8.6E-96 T 11-10-2018 AYJ52_04045 0636023667c28ab6d897f7106fc93be4 310 Pfam PF00472 RF-1 domain 173 282 1.5E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AYJ52_07825 3438c688c49c938959e23f5f3b1b829d 181 Pfam PF11659 Protein of unknown function (DUF3261) 40 170 3.4E-22 T 11-10-2018 IPR021675 Protein of unknown function DUF3261 AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 357 385 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 226 400 7.6E-6 T 11-10-2018 AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 350 358 6.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 297 308 6.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 370 389 6.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 244 1.5E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 344 360 1.5E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 423 443 1.5E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 297 308 1.5E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 390 407 1.5E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 370 389 1.5E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 Gene3D G3DSA:3.40.50.720 24 219 6.5E-57 T 11-10-2018 AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 232 456 1.3E-45 T 11-10-2018 AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 Gene3D G3DSA:3.40.50.720 221 462 4.4E-61 T 11-10-2018 AYJ52_16095 3b91b27bb733f5d20574de434aa11d6a 463 SUPERFAMILY SSF51735 222 457 6.76E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_10525 66d876f278aae121dc38cb32f80fb955 672 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 605 1.1E-222 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AYJ52_10525 66d876f278aae121dc38cb32f80fb955 672 Gene3D G3DSA:3.90.1310.10 64 244 2.3E-48 T 11-10-2018 AYJ52_10525 66d876f278aae121dc38cb32f80fb955 672 SUPERFAMILY SSF56601 250 606 7.82E-98 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_10525 66d876f278aae121dc38cb32f80fb955 672 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 600 1.3E-75 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AYJ52_10525 66d876f278aae121dc38cb32f80fb955 672 Gene3D G3DSA:3.30.1390.30 85 160 2.3E-48 T 11-10-2018 AYJ52_10525 66d876f278aae121dc38cb32f80fb955 672 SUPERFAMILY SSF56519 56 249 2.35E-53 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AYJ52_10525 66d876f278aae121dc38cb32f80fb955 672 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 3 609 50.292 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AYJ52_10525 66d876f278aae121dc38cb32f80fb955 672 Gene3D G3DSA:3.40.710.10 245 617 2.3E-100 T 11-10-2018 AYJ52_10525 66d876f278aae121dc38cb32f80fb955 672 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 234 3.8E-46 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AYJ52_15440 1acb7f4a2e89abdea80a0ae884fd297f 223 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 217 1.6E-29 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AYJ52_18570 f2d40f12880f74d61520db42365d0a8c 145 Pfam PF03061 Thioesterase superfamily 57 133 8.6E-9 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AYJ52_18570 f2d40f12880f74d61520db42365d0a8c 145 SUPERFAMILY SSF54637 5 141 5.45E-35 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_18570 f2d40f12880f74d61520db42365d0a8c 145 Gene3D G3DSA:3.10.129.10 5 145 8.8E-37 T 11-10-2018 AYJ52_18570 f2d40f12880f74d61520db42365d0a8c 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 29 141 2.8E-20 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AYJ52_13560 80b7a43432ac6bdd44dbdb2e047849a4 380 SUPERFAMILY SSF52540 58 198 3.34E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13560 80b7a43432ac6bdd44dbdb2e047849a4 380 Gene3D G3DSA:3.40.50.300 48 213 4.3E-22 T 11-10-2018 AYJ52_13560 80b7a43432ac6bdd44dbdb2e047849a4 380 Pfam PF03969 AFG1-like ATPase 16 368 8.7E-131 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 AYJ52_13560 80b7a43432ac6bdd44dbdb2e047849a4 380 Hamap MF_01919 Cell division protein ZapE [zapE]. 15 373 51.08 T 11-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AYJ52_12700 cc8fcdf104b4919c30bcda0ea569974b 559 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 12 559 1.5E-291 T 11-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 AYJ52_12700 cc8fcdf104b4919c30bcda0ea569974b 559 SUPERFAMILY SSF100950 43 283 1.12E-31 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_12700 cc8fcdf104b4919c30bcda0ea569974b 559 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 12 559 6.3E-302 T 11-10-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 AYJ52_12700 cc8fcdf104b4919c30bcda0ea569974b 559 Gene3D G3DSA:3.40.1080.10 39 245 1.8E-16 T 11-10-2018 AYJ52_12700 cc8fcdf104b4919c30bcda0ea569974b 559 SUPERFAMILY SSF100950 231 498 2.39E-20 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 1.6E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 154 2.8E-20 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 34.632 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 Gene3D G3DSA:1.10.150.20 243 327 2.4E-37 T 11-10-2018 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 SMART SM00662 23 232 1.1E-86 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 SUPERFAMILY SSF55257 6 231 3.73E-31 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 SUPERFAMILY SSF47789 249 322 6.54E-26 T 11-10-2018 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 306 4.8E-24 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 3.0E-105 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 Gene3D G3DSA:3.30.1360.10 17 225 2.2E-79 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 Gene3D G3DSA:2.170.120.12 53 175 2.2E-79 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 7.0E-35 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_02565 4f0b5aae81fa35d14152a08763e42175 335 SUPERFAMILY SSF56553 53 176 7.72E-36 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_07470 174f4aecd6a65137d5d00e493258875d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 7.8E-28 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07470 174f4aecd6a65137d5d00e493258875d 78 Pfam PF00830 Ribosomal L28 family 3 61 1.0E-26 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_07470 174f4aecd6a65137d5d00e493258875d 78 SUPERFAMILY SSF143800 2 77 5.3E-30 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_07470 174f4aecd6a65137d5d00e493258875d 78 Gene3D G3DSA:2.30.170.40 2 78 6.1E-33 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_07470 174f4aecd6a65137d5d00e493258875d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.279 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_14185 17e92354014e646af24a3350f8321e64 328 SMART SM00342 237 324 5.1E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_14185 17e92354014e646af24a3350f8321e64 328 Gene3D G3DSA:1.10.10.60 221 326 1.7E-28 T 11-10-2018 AYJ52_14185 17e92354014e646af24a3350f8321e64 328 Pfam PF14525 AraC-binding-like domain 21 199 2.0E-22 T 11-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AYJ52_14185 17e92354014e646af24a3350f8321e64 328 SUPERFAMILY SSF46689 274 326 2.15E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14185 17e92354014e646af24a3350f8321e64 328 Pfam PF12833 Helix-turn-helix domain 245 324 5.0E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_14185 17e92354014e646af24a3350f8321e64 328 SUPERFAMILY SSF46689 221 271 6.63E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_19225 ccc009db0ff3e6bd9465ed1628dbbd2f 96 SUPERFAMILY SSF50129 2 95 9.14E-34 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_19225 ccc009db0ff3e6bd9465ed1628dbbd2f 96 SMART SM00883 3 95 4.8E-54 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_19225 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Gene3D G3DSA:2.30.33.40 2 96 7.8E-36 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AYJ52_19225 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Hamap MF_00580 10 kDa chaperonin [groS]. 3 96 26.628 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_19225 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 26 47 1.9E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_19225 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_19225 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 4 19 1.9E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_19225 ccc009db0ff3e6bd9465ed1628dbbd2f 96 PRINTS PR00297 10kDa chaperonin signature 61 73 1.9E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_19225 ccc009db0ff3e6bd9465ed1628dbbd2f 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 4 28 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AYJ52_19225 ccc009db0ff3e6bd9465ed1628dbbd2f 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 3.2E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AYJ52_10990 faec0ca5659b8a3ad9e97afe38ce42a7 625 Pfam PF00501 AMP-binding enzyme 53 473 9.7E-53 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_10990 faec0ca5659b8a3ad9e97afe38ce42a7 625 Gene3D G3DSA:3.40.50.12780 31 458 1.2E-58 T 11-10-2018 AYJ52_10990 faec0ca5659b8a3ad9e97afe38ce42a7 625 SUPERFAMILY SSF56801 17 520 1.7E-66 T 11-10-2018 AYJ52_04530 921ed2b81119f036748325f233f5ffaa 306 Gene3D G3DSA:3.40.800.10 1 306 3.4E-112 T 11-10-2018 AYJ52_04530 921ed2b81119f036748325f233f5ffaa 306 Hamap MF_00737 Formimidoylglutamase [hutG]. 2 305 39.554 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AYJ52_04530 921ed2b81119f036748325f233f5ffaa 306 PIRSF PIRSF036979 13 306 3.7E-32 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AYJ52_04530 921ed2b81119f036748325f233f5ffaa 306 SUPERFAMILY SSF52768 18 304 9.71E-79 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AYJ52_04530 921ed2b81119f036748325f233f5ffaa 306 ProSitePatterns PS01053 Arginase family signature. 234 255 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AYJ52_04530 921ed2b81119f036748325f233f5ffaa 306 Pfam PF00491 Arginase family 32 303 5.0E-63 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AYJ52_04530 921ed2b81119f036748325f233f5ffaa 306 TIGRFAM TIGR01227 hutG: formimidoylglutamase 19 303 3.0E-89 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AYJ52_04530 921ed2b81119f036748325f233f5ffaa 306 PRINTS PR00116 Arginase signature 266 280 6.1E-8 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AYJ52_04530 921ed2b81119f036748325f233f5ffaa 306 PRINTS PR00116 Arginase signature 112 127 6.1E-8 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AYJ52_04530 921ed2b81119f036748325f233f5ffaa 306 PRINTS PR00116 Arginase signature 231 260 6.1E-8 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AYJ52_09560 4b6097f80e504aaedbdca48d29429595 192 Gene3D G3DSA:2.50.20.10 26 191 3.4E-35 T 11-10-2018 AYJ52_09560 4b6097f80e504aaedbdca48d29429595 192 Pfam PF03550 Outer membrane lipoprotein LolB 41 191 3.5E-39 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AYJ52_09560 4b6097f80e504aaedbdca48d29429595 192 SUPERFAMILY SSF89392 21 191 2.0E-35 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AYJ52_09560 4b6097f80e504aaedbdca48d29429595 192 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 33 191 3.5E-31 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AYJ52_12190 eab7eb3cfc6c02212f38a754be8aa6a4 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AYJ52_12190 eab7eb3cfc6c02212f38a754be8aa6a4 257 Gene3D G3DSA:1.10.12.10 200 257 1.5E-21 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AYJ52_12190 eab7eb3cfc6c02212f38a754be8aa6a4 257 SUPERFAMILY SSF52096 5 256 2.68E-81 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_12190 eab7eb3cfc6c02212f38a754be8aa6a4 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 256 3.8E-70 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_12190 eab7eb3cfc6c02212f38a754be8aa6a4 257 Gene3D G3DSA:3.90.226.10 4 199 2.5E-67 T 11-10-2018 AYJ52_15855 d69a1d16c2db52db5a923b7e1af280cf 343 SUPERFAMILY SSF102114 14 282 6.8E-66 T 11-10-2018 AYJ52_15855 d69a1d16c2db52db5a923b7e1af280cf 343 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 13 343 35.377 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_15855 d69a1d16c2db52db5a923b7e1af280cf 343 Pfam PF13353 4Fe-4S single cluster domain 29 132 2.3E-8 T 11-10-2018 AYJ52_15855 d69a1d16c2db52db5a923b7e1af280cf 343 Pfam PF06463 Molybdenum Cofactor Synthesis C 193 298 1.7E-26 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_15855 d69a1d16c2db52db5a923b7e1af280cf 343 Pfam PF04055 Radical SAM superfamily 26 186 6.0E-25 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_15855 d69a1d16c2db52db5a923b7e1af280cf 343 SMART SM00729 22 225 6.7E-6 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AYJ52_15855 d69a1d16c2db52db5a923b7e1af280cf 343 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 13 343 1.3E-107 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_15855 d69a1d16c2db52db5a923b7e1af280cf 343 Gene3D G3DSA:3.20.20.70 11 343 4.3E-83 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_07870 5ab829adb5b4b9f144b58822bb5840ef 138 Pfam PF00581 Rhodanese-like domain 47 126 6.6E-12 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_07870 5ab829adb5b4b9f144b58822bb5840ef 138 Gene3D G3DSA:3.40.250.10 37 136 1.8E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_07870 5ab829adb5b4b9f144b58822bb5840ef 138 SMART SM00450 37 130 1.5E-14 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_07870 5ab829adb5b4b9f144b58822bb5840ef 138 SUPERFAMILY SSF52821 16 134 1.57E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_18875 fbeb6abff38d391956ac297f4346d808 216 SUPERFAMILY SSF52317 2 178 4.81E-39 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_18875 fbeb6abff38d391956ac297f4346d808 216 Pfam PF01965 DJ-1/PfpI family 5 154 5.2E-21 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AYJ52_18875 fbeb6abff38d391956ac297f4346d808 216 Gene3D G3DSA:3.40.50.880 1 212 8.2E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_02175 7caa3596078089f19072493d51647218 159 SUPERFAMILY SSF103088 43 159 5.23E-36 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_02175 7caa3596078089f19072493d51647218 159 Gene3D G3DSA:3.30.1330.60 25 158 2.4E-40 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_02175 7caa3596078089f19072493d51647218 159 Pfam PF00691 OmpA family 56 151 2.4E-22 T 11-10-2018 IPR006665 OmpA-like domain AYJ52_02175 7caa3596078089f19072493d51647218 159 PRINTS PR01021 OMPA domain signature 57 79 7.1E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_02175 7caa3596078089f19072493d51647218 159 PRINTS PR01021 OMPA domain signature 87 102 7.1E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_02175 7caa3596078089f19072493d51647218 159 PRINTS PR01021 OMPA domain signature 102 118 7.1E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_10600 86aadfece40fb91e984e879179a0bd31 94 SUPERFAMILY SSF102829 7 89 1.24E-14 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily AYJ52_10600 86aadfece40fb91e984e879179a0bd31 94 Pfam PF05164 Cell division protein ZapA 7 80 5.6E-12 T 11-10-2018 IPR007838 Cell division protein ZapA-like AYJ52_10600 86aadfece40fb91e984e879179a0bd31 94 Gene3D G3DSA:1.10.20.30 1 46 7.1E-7 T 11-10-2018 AYJ52_11125 6b08b49c25d5af1a1a2e03d42102a80e 332 Gene3D G3DSA:3.20.20.140 1 332 4.9E-110 T 11-10-2018 AYJ52_11125 6b08b49c25d5af1a1a2e03d42102a80e 332 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 10 329 8.5E-127 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AYJ52_11125 6b08b49c25d5af1a1a2e03d42102a80e 332 SUPERFAMILY SSF51556 5 331 3.41E-94 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_11125 6b08b49c25d5af1a1a2e03d42102a80e 332 Pfam PF00962 Adenosine/AMP deaminase 10 326 3.9E-80 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AYJ52_11125 6b08b49c25d5af1a1a2e03d42102a80e 332 Hamap MF_01962 Adenine deaminase. 6 318 89.631 T 11-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AYJ52_06240 c3630d563f856ef8f33abe9523144cd9 493 Gene3D G3DSA:1.20.1600.10 70 479 1.3E-131 T 11-10-2018 AYJ52_06240 c3630d563f856ef8f33abe9523144cd9 493 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 21 479 3.2E-121 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AYJ52_06240 c3630d563f856ef8f33abe9523144cd9 493 Pfam PF02321 Outer membrane efflux protein 79 264 1.2E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_06240 c3630d563f856ef8f33abe9523144cd9 493 Pfam PF02321 Outer membrane efflux protein 297 477 1.2E-28 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_06240 c3630d563f856ef8f33abe9523144cd9 493 SUPERFAMILY SSF56954 9 482 2.09E-108 T 11-10-2018 AYJ52_06240 c3630d563f856ef8f33abe9523144cd9 493 Gene3D G3DSA:2.20.200.10 116 368 1.3E-131 T 11-10-2018 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 Pfam PF01433 Peptidase family M1 domain 254 476 3.4E-71 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 SUPERFAMILY SSF63737 32 229 1.57E-43 T 11-10-2018 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 Pfam PF11838 ERAP1-like C-terminal domain 562 880 1.8E-40 T 11-10-2018 IPR024571 ERAP1-like C-terminal domain AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 SUPERFAMILY SSF55486 246 491 2.62E-73 T 11-10-2018 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 Gene3D G3DSA:1.10.390.60 241 506 5.5E-83 T 11-10-2018 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 Gene3D G3DSA:2.60.40.1730 27 229 7.9E-49 T 11-10-2018 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 164 179 1.1E-23 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 297 307 1.1E-23 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 212 227 1.1E-23 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 332 347 1.1E-23 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 351 363 1.1E-23 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AYJ52_17740 2366a39c7607575045ca70cc4178d9fd 899 Gene3D G3DSA:1.25.50.20 603 898 7.4E-21 T 11-10-2018 AYJ52_11005 5c74ee21c71c43955ac7fddba9897d78 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 84 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_11005 5c74ee21c71c43955ac7fddba9897d78 410 SUPERFAMILY SSF103473 9 399 4.58E-76 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_11005 5c74ee21c71c43955ac7fddba9897d78 410 Pfam PF07690 Major Facilitator Superfamily 19 320 7.0E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_11005 5c74ee21c71c43955ac7fddba9897d78 410 Gene3D G3DSA:1.20.1250.20 216 402 1.9E-23 T 11-10-2018 AYJ52_11005 5c74ee21c71c43955ac7fddba9897d78 410 Gene3D G3DSA:1.20.1250.20 10 214 2.0E-43 T 11-10-2018 AYJ52_00910 43c815433f8c8d3e6515dc5239bacf4e 208 Pfam PF01569 PAP2 superfamily 85 195 6.4E-21 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AYJ52_00910 43c815433f8c8d3e6515dc5239bacf4e 208 SMART SM00014 79 191 5.5E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AYJ52_00910 43c815433f8c8d3e6515dc5239bacf4e 208 SUPERFAMILY SSF48317 4 200 3.92E-34 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AYJ52_00910 43c815433f8c8d3e6515dc5239bacf4e 208 Gene3D G3DSA:1.20.144.10 4 109 2.9E-7 T 11-10-2018 AYJ52_00910 43c815433f8c8d3e6515dc5239bacf4e 208 Gene3D G3DSA:1.20.144.10 110 206 1.4E-21 T 11-10-2018 AYJ52_14695 5207df5be34993b35a6376d953aff502 406 SUPERFAMILY SSF54373 180 278 2.35E-14 T 11-10-2018 AYJ52_14695 5207df5be34993b35a6376d953aff502 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 3.7E-15 T 11-10-2018 AYJ52_14695 5207df5be34993b35a6376d953aff502 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 3.7E-15 T 11-10-2018 AYJ52_14695 5207df5be34993b35a6376d953aff502 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.7E-15 T 11-10-2018 AYJ52_14695 5207df5be34993b35a6376d953aff502 406 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 3.7E-15 T 11-10-2018 AYJ52_14695 5207df5be34993b35a6376d953aff502 406 Gene3D G3DSA:3.50.50.60 8 351 6.7E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14695 5207df5be34993b35a6376d953aff502 406 SUPERFAMILY SSF51905 7 363 4.0E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14695 5207df5be34993b35a6376d953aff502 406 Gene3D G3DSA:3.30.9.30 40 359 6.7E-115 T 11-10-2018 AYJ52_14695 5207df5be34993b35a6376d953aff502 406 Pfam PF01494 FAD binding domain 7 322 3.0E-23 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AYJ52_12420 89f9b2d97dd7fb480a0183b725910944 301 Gene3D G3DSA:3.20.20.70 1 298 6.5E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_12420 89f9b2d97dd7fb480a0183b725910944 301 Pfam PF00682 HMGL-like 5 277 9.2E-54 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AYJ52_12420 89f9b2d97dd7fb480a0183b725910944 301 SUPERFAMILY SSF51569 2 290 5.49E-70 T 11-10-2018 AYJ52_04590 bf97da5011f8ac607ea26c1a3f1aa012 210 Gene3D G3DSA:1.20.1050.10 83 210 1.1E-53 T 11-10-2018 AYJ52_04590 bf97da5011f8ac607ea26c1a3f1aa012 210 SUPERFAMILY SSF52833 1 83 8.08E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_04590 bf97da5011f8ac607ea26c1a3f1aa012 210 Gene3D G3DSA:3.40.30.10 3 79 6.2E-26 T 11-10-2018 AYJ52_04590 bf97da5011f8ac607ea26c1a3f1aa012 210 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 208 2.2E-89 T 11-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 AYJ52_04590 bf97da5011f8ac607ea26c1a3f1aa012 210 SUPERFAMILY SSF47616 80 208 8.24E-36 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_04590 bf97da5011f8ac607ea26c1a3f1aa012 210 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 4.7E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_04590 bf97da5011f8ac607ea26c1a3f1aa012 210 Pfam PF14497 Glutathione S-transferase, C-terminal domain 121 196 1.8E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AYJ52_07960 991c120d5940f1ab7f36e2ce463ba37b 287 SUPERFAMILY SSF48613 33 273 4.82E-8 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_07960 991c120d5940f1ab7f36e2ce463ba37b 287 Gene3D G3DSA:1.20.910.10 29 279 1.8E-23 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_07960 991c120d5940f1ab7f36e2ce463ba37b 287 SMART SM01236 111 223 5.8E-8 T 11-10-2018 AYJ52_08970 b3a5e385efb074be56d26689b07401e7 461 SUPERFAMILY SSF56935 24 461 7.94E-41 T 11-10-2018 AYJ52_08970 b3a5e385efb074be56d26689b07401e7 461 Gene3D G3DSA:2.40.160.60 33 461 8.0E-21 T 11-10-2018 AYJ52_08970 b3a5e385efb074be56d26689b07401e7 461 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 62 435 1.7E-7 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AYJ52_09750 90829189557dde535020ef850e3307d2 1017 Pfam PF01580 FtsK/SpoIIIE family 637 851 3.0E-64 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AYJ52_09750 90829189557dde535020ef850e3307d2 1017 Gene3D G3DSA:1.10.10.10 949 1016 8.9E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_09750 90829189557dde535020ef850e3307d2 1017 Gene3D G3DSA:3.40.50.300 634 937 9.6E-113 T 11-10-2018 AYJ52_09750 90829189557dde535020ef850e3307d2 1017 SUPERFAMILY SSF52540 611 924 1.36E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09750 90829189557dde535020ef850e3307d2 1017 SMART SM00843 955 1017 2.7E-32 T 11-10-2018 IPR018541 FtsK gamma domain AYJ52_09750 90829189557dde535020ef850e3307d2 1017 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 13 172 3.5E-30 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region AYJ52_09750 90829189557dde535020ef850e3307d2 1017 Gene3D G3DSA:3.30.980.40 528 633 9.2E-33 T 11-10-2018 AYJ52_09750 90829189557dde535020ef850e3307d2 1017 Pfam PF09397 Ftsk gamma domain 957 1017 5.2E-26 T 11-10-2018 IPR018541 FtsK gamma domain AYJ52_09750 90829189557dde535020ef850e3307d2 1017 SUPERFAMILY SSF46785 955 1017 1.9E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 Gene3D G3DSA:3.20.20.70 496 1182 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 Gene3D G3DSA:3.60.20.10 25 558 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 Pfam PF04898 Glutamate synthase central domain 470 749 4.8E-106 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 SUPERFAMILY SSF69336 1224 1478 5.89E-88 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 Pfam PF01493 GXGXG motif 1248 1434 6.0E-76 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 Gene3D G3DSA:2.160.20.60 1221 1491 7.4E-98 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 SUPERFAMILY SSF56235 25 442 7.33E-141 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 Pfam PF00310 Glutamine amidotransferases class-II 25 439 5.0E-163 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 Pfam PF01645 Conserved region in glutamate synthase 806 1167 2.4E-147 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 SUPERFAMILY SSF51395 462 1200 5.29E-247 T 11-10-2018 AYJ52_03225 76f2cd26f8b67b62206afd3aaa787788 1493 Gene3D G3DSA:3.20.20.70 444 804 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_19120 1c4b35e8673b68a9600531f0fd4fadf6 1089 Gene3D G3DSA:3.40.50.300 780 989 8.6E-11 T 11-10-2018 AYJ52_19120 1c4b35e8673b68a9600531f0fd4fadf6 1089 SUPERFAMILY SSF52540 544 961 3.25E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_03285 8c957a4e7ea54abb4925a5de6a298998 372 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 370 23.419 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_03285 8c957a4e7ea54abb4925a5de6a298998 372 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_03285 8c957a4e7ea54abb4925a5de6a298998 372 ProSitePatterns PS01348 MraY family signature 2. 201 212 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_03285 8c957a4e7ea54abb4925a5de6a298998 372 Pfam PF00953 Glycosyl transferase family 4 99 296 5.6E-33 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AYJ52_03285 8c957a4e7ea54abb4925a5de6a298998 372 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 372 5.8E-124 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_06390 1eb8e591c5047647f51df2ccbce24152 394 Pfam PF03572 Peptidase family S41 210 369 1.4E-44 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AYJ52_06390 1eb8e591c5047647f51df2ccbce24152 394 SMART SM00245 184 372 4.1E-45 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AYJ52_06390 1eb8e591c5047647f51df2ccbce24152 394 Gene3D G3DSA:2.30.42.10 113 201 3.9E-66 T 11-10-2018 AYJ52_06390 1eb8e591c5047647f51df2ccbce24152 394 SUPERFAMILY SSF52096 54 376 4.8E-60 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_06390 1eb8e591c5047647f51df2ccbce24152 394 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 66 377 1.4E-68 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AYJ52_06390 1eb8e591c5047647f51df2ccbce24152 394 SUPERFAMILY SSF50156 111 181 3.19E-7 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AYJ52_06390 1eb8e591c5047647f51df2ccbce24152 394 Gene3D G3DSA:3.90.226.10 202 368 3.9E-66 T 11-10-2018 AYJ52_06390 1eb8e591c5047647f51df2ccbce24152 394 Gene3D G3DSA:3.30.750.44 64 347 3.9E-66 T 11-10-2018 AYJ52_15805 64df464085f6d104961c44d495b33e72 116 Gene3D G3DSA:3.40.1260.10 1 115 7.7E-13 T 11-10-2018 IPR027396 DsrEFH-like AYJ52_15805 64df464085f6d104961c44d495b33e72 116 SUPERFAMILY SSF75169 1 116 2.12E-5 T 11-10-2018 IPR027396 DsrEFH-like AYJ52_12340 e88254bf7d1cbc0b074c4b8e6e0d8937 280 SMART SM00346 33 123 1.6E-20 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_12340 e88254bf7d1cbc0b074c4b8e6e0d8937 280 SUPERFAMILY SSF55781 100 277 6.21E-36 T 11-10-2018 AYJ52_12340 e88254bf7d1cbc0b074c4b8e6e0d8937 280 Gene3D G3DSA:3.30.450.40 107 274 4.2E-30 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_12340 e88254bf7d1cbc0b074c4b8e6e0d8937 280 SUPERFAMILY SSF46785 33 107 7.09E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12340 e88254bf7d1cbc0b074c4b8e6e0d8937 280 Gene3D G3DSA:1.10.10.10 22 101 4.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12340 e88254bf7d1cbc0b074c4b8e6e0d8937 280 Pfam PF09339 IclR helix-turn-helix domain 35 85 6.7E-16 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_12340 e88254bf7d1cbc0b074c4b8e6e0d8937 280 Pfam PF01614 Bacterial transcriptional regulator 153 268 1.3E-11 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AYJ52_07580 6673f550604f0baa7545f30fadbb020d 195 SUPERFAMILY SSF81901 41 151 1.7E-28 T 11-10-2018 AYJ52_07580 6673f550604f0baa7545f30fadbb020d 195 Pfam PF08238 Sel1 repeat 54 87 5.4E-8 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_07580 6673f550604f0baa7545f30fadbb020d 195 Pfam PF08238 Sel1 repeat 89 124 2.2E-9 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_07580 6673f550604f0baa7545f30fadbb020d 195 Pfam PF08238 Sel1 repeat 127 152 10.0 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_07580 6673f550604f0baa7545f30fadbb020d 195 SMART SM00671 89 124 7.5E-10 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_07580 6673f550604f0baa7545f30fadbb020d 195 SMART SM00671 53 88 4.8E-9 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_07580 6673f550604f0baa7545f30fadbb020d 195 SMART SM00671 125 156 190.0 T 11-10-2018 IPR006597 Sel1-like repeat AYJ52_07580 6673f550604f0baa7545f30fadbb020d 195 Gene3D G3DSA:1.25.40.10 22 195 4.1E-39 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_01770 a19f9349d867acdf2890b6ed13106bb9 258 SUPERFAMILY SSF56281 18 250 2.1E-31 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_01770 a19f9349d867acdf2890b6ed13106bb9 258 Pfam PF00753 Metallo-beta-lactamase superfamily 17 204 3.1E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_01770 a19f9349d867acdf2890b6ed13106bb9 258 SMART SM00849 19 248 7.3E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_01770 a19f9349d867acdf2890b6ed13106bb9 258 Gene3D G3DSA:3.60.15.10 7 258 6.6E-51 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_17270 894830744ae72c5719f1031d9578174f 261 Gene3D G3DSA:3.20.20.70 1 259 3.3E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_17270 894830744ae72c5719f1031d9578174f 261 Hamap MF_00443 Thiazole synthase [thiG]. 5 260 41.759 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AYJ52_17270 894830744ae72c5719f1031d9578174f 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 8 254 4.2E-108 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AYJ52_17270 894830744ae72c5719f1031d9578174f 261 SUPERFAMILY SSF110399 5 246 2.09E-88 T 11-10-2018 AYJ52_00825 48f5bd05a597209912c0d14f9f52e7af 394 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AYJ52_00825 48f5bd05a597209912c0d14f9f52e7af 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 386 5.9E-110 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AYJ52_00825 48f5bd05a597209912c0d14f9f52e7af 394 SUPERFAMILY SSF56796 5 394 3.53E-112 T 11-10-2018 AYJ52_00825 48f5bd05a597209912c0d14f9f52e7af 394 Gene3D G3DSA:1.20.1090.10 190 394 8.2E-60 T 11-10-2018 AYJ52_00825 48f5bd05a597209912c0d14f9f52e7af 394 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AYJ52_00825 48f5bd05a597209912c0d14f9f52e7af 394 Gene3D G3DSA:3.40.50.1970 1 188 3.3E-57 T 11-10-2018 AYJ52_04025 b1e1774dc2e993b0e27631a806a4eb5e 235 Pfam PF04452 RNA methyltransferase 21 233 3.4E-45 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AYJ52_04025 b1e1774dc2e993b0e27631a806a4eb5e 235 Gene3D G3DSA:3.40.1280.10 6 234 3.3E-31 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ52_04025 b1e1774dc2e993b0e27631a806a4eb5e 235 SUPERFAMILY SSF75217 73 233 5.23E-35 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AYJ52_04025 b1e1774dc2e993b0e27631a806a4eb5e 235 PIRSF PIRSF015601 1 235 6.1E-45 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AYJ52_04025 b1e1774dc2e993b0e27631a806a4eb5e 235 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 7 230 5.6E-32 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AYJ52_07575 ff810a58a3b0d6e0eee1f757bb77de2e 208 Gene3D G3DSA:3.90.950.10 8 208 1.5E-68 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AYJ52_07575 ff810a58a3b0d6e0eee1f757bb77de2e 208 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 12 206 1.3E-51 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AYJ52_07575 ff810a58a3b0d6e0eee1f757bb77de2e 208 Hamap MF_01405 dITP/XTP pyrophosphatase. 10 208 47.848 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 AYJ52_07575 ff810a58a3b0d6e0eee1f757bb77de2e 208 Pfam PF01725 Ham1 family 12 204 3.5E-52 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AYJ52_07575 ff810a58a3b0d6e0eee1f757bb77de2e 208 SUPERFAMILY SSF52972 6 207 1.15E-65 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AYJ52_14480 2f206450a002691034370121a3f5545f 331 Gene3D G3DSA:3.40.190.170 56 245 2.6E-8 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AYJ52_16055 f2f95dbc6826f8dca02e38a4df6f0fba 742 Pfam PF04185 Phosphoesterase family 46 476 3.2E-102 T 11-10-2018 IPR007312 Phosphoesterase GO:0016788 AYJ52_16055 f2f95dbc6826f8dca02e38a4df6f0fba 742 Gene3D G3DSA:3.40.720.10 35 208 5.4E-30 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AYJ52_16055 f2f95dbc6826f8dca02e38a4df6f0fba 742 Gene3D G3DSA:3.40.720.10 311 524 7.4E-49 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AYJ52_16055 f2f95dbc6826f8dca02e38a4df6f0fba 742 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 3 741 4.8E-285 T 11-10-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AYJ52_16055 f2f95dbc6826f8dca02e38a4df6f0fba 742 Pfam PF05506 Domain of unknown function (DUF756) 548 635 3.5E-23 T 11-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AYJ52_16055 f2f95dbc6826f8dca02e38a4df6f0fba 742 Pfam PF05506 Domain of unknown function (DUF756) 646 728 1.1E-20 T 11-10-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AYJ52_17265 47a271e76f09f55a6c096b8b1a4777c6 65 SUPERFAMILY SSF54285 2 64 7.85E-16 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AYJ52_17265 47a271e76f09f55a6c096b8b1a4777c6 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 3.3E-17 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis AYJ52_17265 47a271e76f09f55a6c096b8b1a4777c6 65 Gene3D G3DSA:3.10.20.30 1 65 1.0E-18 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_17265 47a271e76f09f55a6c096b8b1a4777c6 65 Pfam PF02597 ThiS family 8 65 3.9E-10 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AYJ52_05150 e72c2a8e0d82386f65b0c4fa608f748b 333 PIRSF PIRSF004491 2 333 9.8E-108 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AYJ52_05150 e72c2a8e0d82386f65b0c4fa608f748b 333 SMART SM00904 179 326 1.3E-42 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AYJ52_05150 e72c2a8e0d82386f65b0c4fa608f748b 333 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 324 3.6E-73 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AYJ52_05150 e72c2a8e0d82386f65b0c4fa608f748b 333 SUPERFAMILY SSF52374 18 172 1.52E-31 T 11-10-2018 AYJ52_05150 e72c2a8e0d82386f65b0c4fa608f748b 333 Pfam PF01687 Riboflavin kinase 180 323 1.1E-26 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AYJ52_05150 e72c2a8e0d82386f65b0c4fa608f748b 333 SUPERFAMILY SSF82114 171 328 3.71E-33 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AYJ52_05150 e72c2a8e0d82386f65b0c4fa608f748b 333 Gene3D G3DSA:3.40.50.620 6 181 7.0E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_05150 e72c2a8e0d82386f65b0c4fa608f748b 333 Pfam PF06574 FAD synthetase 16 163 2.8E-48 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AYJ52_05150 e72c2a8e0d82386f65b0c4fa608f748b 333 Gene3D G3DSA:2.40.30.30 182 332 2.9E-26 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AYJ52_09990 403b6d500ca6bc437ecb195c4f77254a 338 Pfam PF16220 Domain of unknown function (DUF4880) 13 56 3.1E-6 T 11-10-2018 IPR032623 FecR, N-terminal AYJ52_09990 403b6d500ca6bc437ecb195c4f77254a 338 PIRSF PIRSF018266 3 336 1.8E-62 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AYJ52_09990 403b6d500ca6bc437ecb195c4f77254a 338 Gene3D G3DSA:2.60.120.1440 110 249 5.3E-24 T 11-10-2018 AYJ52_09990 403b6d500ca6bc437ecb195c4f77254a 338 Pfam PF04773 FecR protein 123 214 3.3E-19 T 11-10-2018 IPR006860 FecR protein AYJ52_09990 403b6d500ca6bc437ecb195c4f77254a 338 Pfam PF16344 Domain of unknown function (DUF4974) 236 318 3.4E-7 T 11-10-2018 IPR032508 Protein FecR, C-terminal AYJ52_09960 3fd12327c1164fef153acc1d89829b79 177 Gene3D G3DSA:2.60.200.60 3 86 4.5E-9 T 11-10-2018 AYJ52_09960 3fd12327c1164fef153acc1d89829b79 177 Pfam PF05488 PAAR motif 11 78 7.5E-16 T 11-10-2018 IPR008727 PAAR motif AYJ52_07925 fc7d1a01aa399e7f263841ca8e7f7ebb 574 Gene3D G3DSA:3.40.50.1220 191 362 4.6E-61 T 11-10-2018 AYJ52_07925 fc7d1a01aa399e7f263841ca8e7f7ebb 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 4.1E-253 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AYJ52_07925 fc7d1a01aa399e7f263841ca8e7f7ebb 574 SUPERFAMILY SSF52518 4 179 8.41E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_07925 fc7d1a01aa399e7f263841ca8e7f7ebb 574 SUPERFAMILY SSF52518 373 568 1.71E-66 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_07925 fc7d1a01aa399e7f263841ca8e7f7ebb 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.5E-43 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AYJ52_07925 fc7d1a01aa399e7f263841ca8e7f7ebb 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.6E-45 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AYJ52_07925 fc7d1a01aa399e7f263841ca8e7f7ebb 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 4.9E-59 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AYJ52_07925 fc7d1a01aa399e7f263841ca8e7f7ebb 574 Gene3D G3DSA:3.40.50.970 1 182 1.5E-72 T 11-10-2018 AYJ52_07925 fc7d1a01aa399e7f263841ca8e7f7ebb 574 Gene3D G3DSA:3.40.50.970 366 573 1.5E-63 T 11-10-2018 AYJ52_07925 fc7d1a01aa399e7f263841ca8e7f7ebb 574 SUPERFAMILY SSF52467 190 362 1.04E-64 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 17 263 27.706 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 SUPERFAMILY SSF53613 11 268 6.74E-50 T 11-10-2018 IPR029056 Ribokinase-like AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 Pfam PF02110 Hydroxyethylthiazole kinase family 17 258 2.8E-64 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 Gene3D G3DSA:3.40.1190.20 1 271 6.8E-79 T 11-10-2018 IPR029056 Ribokinase-like AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 PIRSF PIRSF000513 9 271 3.5E-72 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 1.3E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 1.3E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 124 138 1.3E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 167 184 1.3E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 1.3E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_16340 ad884a684b4bfaa78f062bd2c44e8c76 275 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 1.3E-24 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_01780 fc9778a4b5994ae71a2714c7b7672d21 354 Pfam PF05036 Sporulation related domain 273 346 9.3E-16 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AYJ52_01780 fc9778a4b5994ae71a2714c7b7672d21 354 SUPERFAMILY SSF110997 272 345 5.1E-14 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AYJ52_01780 fc9778a4b5994ae71a2714c7b7672d21 354 Gene3D G3DSA:3.30.70.1070 275 341 8.2E-8 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AYJ52_04880 8bc49d42ef01b0a8cbc0d35e068e8f59 334 SUPERFAMILY SSF53850 47 240 9.77E-7 T 11-10-2018 AYJ52_04880 8bc49d42ef01b0a8cbc0d35e068e8f59 334 Gene3D G3DSA:3.40.190.170 30 235 3.1E-12 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AYJ52_07385 546e15f8c6db4a69d5f6a5db5b7df07d 311 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 302 3.3E-68 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AYJ52_07385 546e15f8c6db4a69d5f6a5db5b7df07d 311 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 9 311 42.741 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AYJ52_07385 546e15f8c6db4a69d5f6a5db5b7df07d 311 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 11 311 7.8E-90 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AYJ52_07385 546e15f8c6db4a69d5f6a5db5b7df07d 311 PIRSF PIRSF026649 8 311 1.6E-89 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AYJ52_18665 9bbefd2a100c2da72154d35b035af836 270 Pfam PF01063 Amino-transferase class IV 25 245 2.2E-44 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AYJ52_18665 9bbefd2a100c2da72154d35b035af836 270 Gene3D G3DSA:3.30.470.10 3 107 7.9E-24 T 11-10-2018 AYJ52_18665 9bbefd2a100c2da72154d35b035af836 270 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 6 260 1.8E-65 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AYJ52_18665 9bbefd2a100c2da72154d35b035af836 270 Gene3D G3DSA:3.20.10.10 125 263 9.8E-38 T 11-10-2018 AYJ52_18665 9bbefd2a100c2da72154d35b035af836 270 SUPERFAMILY SSF56752 2 258 1.29E-54 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AYJ52_02945 2f098bb3b299274c2033024e0e6ff456 324 SUPERFAMILY SSF53187 1 321 1.75E-81 T 11-10-2018 AYJ52_02945 2f098bb3b299274c2033024e0e6ff456 324 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 323 1.1E-53 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AYJ52_02945 2f098bb3b299274c2033024e0e6ff456 324 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 320 7.3E-136 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AYJ52_02945 2f098bb3b299274c2033024e0e6ff456 324 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 324 137.026 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AYJ52_02945 2f098bb3b299274c2033024e0e6ff456 324 Gene3D G3DSA:3.40.630.10 1 324 1.1E-111 T 11-10-2018 AYJ52_02945 2f098bb3b299274c2033024e0e6ff456 324 PIRSF PIRSF017020 1 324 7.8E-116 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AYJ52_01945 ed1a3f10f059498b617c9077db24af25 150 Pfam PF01757 Acyltransferase family 8 128 7.6E-18 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AYJ52_16110 dea767801a12940835de85f6a74704e4 297 Gene3D G3DSA:3.40.190.290 94 296 5.9E-25 T 11-10-2018 AYJ52_16110 dea767801a12940835de85f6a74704e4 297 SUPERFAMILY SSF46785 2 82 7.62E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_16110 dea767801a12940835de85f6a74704e4 297 Gene3D G3DSA:1.10.10.10 1 87 5.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_16110 dea767801a12940835de85f6a74704e4 297 Pfam PF03466 LysR substrate binding domain 95 291 3.5E-20 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_16110 dea767801a12940835de85f6a74704e4 297 SUPERFAMILY SSF53850 90 290 1.5E-24 T 11-10-2018 AYJ52_16110 dea767801a12940835de85f6a74704e4 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.9E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_04325 5b0309647903ad5aebae4d5be484685a 525 SUPERFAMILY SSF55931 10 521 1.77E-176 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AYJ52_04325 5b0309647903ad5aebae4d5be484685a 525 Gene3D G3DSA:3.30.590.20 19 525 1.6E-173 T 11-10-2018 AYJ52_04325 5b0309647903ad5aebae4d5be484685a 525 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 525 185.155 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AYJ52_04325 5b0309647903ad5aebae4d5be484685a 525 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 18 523 5.8E-159 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AYJ52_04325 5b0309647903ad5aebae4d5be484685a 525 Pfam PF04262 Glutamate-cysteine ligase 18 388 5.1E-144 T 11-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AYJ52_00315 1af6a6afdef2d7df9c2b8accb604a6ba 301 Hamap MF_00188 Protease HtpX [htpX]. 1 298 25.698 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AYJ52_00315 1af6a6afdef2d7df9c2b8accb604a6ba 301 Gene3D G3DSA:3.30.2010.10 74 165 5.0E-34 T 11-10-2018 AYJ52_00315 1af6a6afdef2d7df9c2b8accb604a6ba 301 Pfam PF01435 Peptidase family M48 81 297 1.9E-40 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AYJ52_01560 55417657bb9658ea99de04cbd3201155 450 TIGRFAM TIGR03616 RutG: pyrimidine utilization transport protein G 4 429 5.8E-239 T 11-10-2018 IPR019918 Pyrimidine permease RutG, predicted GO:0006864|GO:0015218 AYJ52_01560 55417657bb9658ea99de04cbd3201155 450 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 31 425 6.9E-106 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AYJ52_01560 55417657bb9658ea99de04cbd3201155 450 Pfam PF00860 Permease family 32 400 4.3E-96 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 Gene3D G3DSA:1.10.10.60 168 229 3.1E-18 T 11-10-2018 AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 Pfam PF02311 AraC-like ligand binding domain 15 142 7.0E-23 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 SUPERFAMILY SSF46689 224 270 1.65E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 Pfam PF12833 Helix-turn-helix domain 193 269 1.3E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 265 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 269 9.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 253 9.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 SUPERFAMILY SSF46689 171 221 2.96E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 SUPERFAMILY SSF51215 26 153 8.11E-21 T 11-10-2018 IPR037923 Transcription regulator HTH-like AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 SMART SM00342 187 269 3.7E-32 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_17570 fa98ab5a5c30e8e8c169e289329f6c6b 274 Gene3D G3DSA:1.10.10.2730 230 270 1.7E-15 T 11-10-2018 AYJ52_08810 6617c8915af73fc8a8e2bd6c55557afb 273 SUPERFAMILY SSF56784 1 263 1.81E-57 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_08810 6617c8915af73fc8a8e2bd6c55557afb 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 262 2.3E-50 T 11-10-2018 AYJ52_08810 6617c8915af73fc8a8e2bd6c55557afb 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 262 3.0E-51 T 11-10-2018 IPR000150 Cof family GO:0016787 AYJ52_08810 6617c8915af73fc8a8e2bd6c55557afb 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 235 4.2E-16 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AYJ52_08810 6617c8915af73fc8a8e2bd6c55557afb 273 Gene3D G3DSA:3.30.1240.10 83 192 3.3E-68 T 11-10-2018 AYJ52_08810 6617c8915af73fc8a8e2bd6c55557afb 273 Gene3D G3DSA:3.40.50.1000 7 262 3.3E-68 T 11-10-2018 IPR023214 HAD superfamily AYJ52_12375 ffe40f305d7bcb64c5a17461e682ab46 222 SUPERFAMILY SSF100950 2 220 5.51E-77 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_12375 ffe40f305d7bcb64c5a17461e682ab46 222 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 221 6.0E-117 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AYJ52_12375 ffe40f305d7bcb64c5a17461e682ab46 222 Pfam PF01144 Coenzyme A transferase 13 218 3.0E-67 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_12375 ffe40f305d7bcb64c5a17461e682ab46 222 SMART SM00882 6 219 1.2E-74 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_12375 ffe40f305d7bcb64c5a17461e682ab46 222 Gene3D G3DSA:3.40.1080.10 1 221 1.5E-78 T 11-10-2018 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 SUPERFAMILY SSF56712 23 625 4.84E-200 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Gene3D G3DSA:3.40.50.140 20 183 5.1E-67 T 11-10-2018 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 SMART SM00437 291 545 9.8E-119 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Gene3D G3DSA:1.10.290.10 299 423 2.7E-156 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 SUPERFAMILY SSF57783 716 755 1.29E-6 T 11-10-2018 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 SMART SM00436 153 241 2.6E-48 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Gene3D G3DSA:1.10.460.10 185 589 2.7E-156 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 SUPERFAMILY SSF57783 597 638 1.17E-10 T 11-10-2018 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Hamap MF_00952 DNA topoisomerase 1 [topA]. 22 748 54.974 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 24 648 2.3E-243 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 SMART SM00493 22 152 5.0E-29 T 11-10-2018 IPR006171 TOPRIM domain AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 613 638 1.3E-6 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 727 758 6.3E-6 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Pfam PF01751 Toprim domain 24 162 5.4E-32 T 11-10-2018 IPR006171 TOPRIM domain AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Pfam PF01131 DNA topoisomerase 178 583 5.1E-126 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 126 139 5.8E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 409 425 5.8E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 211 229 5.8E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 333 342 5.8E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 508 522 5.8E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Gene3D G3DSA:3.30.65.10 597 663 3.5E-6 T 11-10-2018 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Gene3D G3DSA:3.30.65.10 713 758 6.1E-7 T 11-10-2018 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Gene3D G3DSA:3.30.65.10 759 821 1.4E-20 T 11-10-2018 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 328 342 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Gene3D G3DSA:2.70.20.10 233 491 2.7E-156 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 SUPERFAMILY SSF57783 823 877 5.1E-17 T 11-10-2018 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Pfam PF08272 Topoisomerase I zinc-ribbon-like 838 877 2.1E-16 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Pfam PF08272 Topoisomerase I zinc-ribbon-like 772 807 8.7E-12 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 Gene3D G3DSA:2.20.25.10 822 878 6.3E-22 T 11-10-2018 AYJ52_07420 35df97efd7f26657e0457bb31a0ed805 878 SUPERFAMILY SSF57783 758 818 1.29E-14 T 11-10-2018 AYJ52_02185 670e6a242bfd45358a1935d22038f373 324 Pfam PF01609 Transposase DDE domain 53 277 4.5E-16 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AYJ52_02185 670e6a242bfd45358a1935d22038f373 324 SUPERFAMILY SSF53098 7 301 4.48E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_19370 670e6a242bfd45358a1935d22038f373 324 Pfam PF01609 Transposase DDE domain 53 277 4.5E-16 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AYJ52_19370 670e6a242bfd45358a1935d22038f373 324 SUPERFAMILY SSF53098 7 301 4.48E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_14285 670e6a242bfd45358a1935d22038f373 324 Pfam PF01609 Transposase DDE domain 53 277 4.5E-16 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AYJ52_14285 670e6a242bfd45358a1935d22038f373 324 SUPERFAMILY SSF53098 7 301 4.48E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_03735 0e344dd4f3f8e54950a2f8ffa5582ed4 75 SMART SM00530 7 62 1.7E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_03735 0e344dd4f3f8e54950a2f8ffa5582ed4 75 Pfam PF01381 Helix-turn-helix 8 59 1.2E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_03735 0e344dd4f3f8e54950a2f8ffa5582ed4 75 SUPERFAMILY SSF47413 2 62 3.38E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_03735 0e344dd4f3f8e54950a2f8ffa5582ed4 75 Gene3D G3DSA:1.10.260.40 1 70 4.8E-21 T 11-10-2018 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 PIRSF PIRSF000729 10 377 5.7E-131 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 Pfam PF01472 PUA domain 286 360 3.0E-20 T 11-10-2018 IPR002478 PUA domain GO:0003723 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 15 268 35.8 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 SMART SM00359 286 360 1.4E-13 T 11-10-2018 IPR002478 PUA domain GO:0003723 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 15 375 2.8E-128 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 Gene3D G3DSA:3.40.1160.10 5 274 1.1E-94 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 Pfam PF00696 Amino acid kinase family 15 244 2.9E-47 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 Gene3D G3DSA:2.30.130.10 275 377 6.8E-31 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 SUPERFAMILY SSF53633 15 265 3.53E-74 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 PRINTS PR00474 Glutamate 5-kinase family signature 86 114 9.7E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 9.7E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 9.7E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 PRINTS PR00474 Glutamate 5-kinase family signature 126 147 9.7E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 PRINTS PR00474 Glutamate 5-kinase family signature 52 66 9.7E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AYJ52_18505 c5eab67390bd466a7b44bd3df344ad04 377 SUPERFAMILY SSF88697 286 376 2.04E-20 T 11-10-2018 IPR015947 PUA-like superfamily AYJ52_12430 0daab16e446ae6ca742678fc1007deb7 267 SUPERFAMILY SSF52096 1 259 7.12E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_12430 0daab16e446ae6ca742678fc1007deb7 267 Gene3D G3DSA:1.10.12.10 204 267 3.1E-22 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AYJ52_12430 0daab16e446ae6ca742678fc1007deb7 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AYJ52_12430 0daab16e446ae6ca742678fc1007deb7 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 260 1.2E-53 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_12430 0daab16e446ae6ca742678fc1007deb7 267 Gene3D G3DSA:3.90.226.10 1 203 1.5E-65 T 11-10-2018 AYJ52_00130 88f8e193015cd79286faaf35b83257ea 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 357 3.9E-158 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AYJ52_00130 88f8e193015cd79286faaf35b83257ea 359 Gene3D G3DSA:3.40.640.10 16 249 3.6E-94 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_00130 88f8e193015cd79286faaf35b83257ea 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AYJ52_00130 88f8e193015cd79286faaf35b83257ea 359 Pfam PF00266 Aminotransferase class-V 4 347 6.6E-57 T 11-10-2018 IPR000192 Aminotransferase class V domain AYJ52_00130 88f8e193015cd79286faaf35b83257ea 359 SUPERFAMILY SSF53383 2 357 3.08E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_00130 88f8e193015cd79286faaf35b83257ea 359 PIRSF PIRSF000525 1 359 1.1E-149 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AYJ52_00130 88f8e193015cd79286faaf35b83257ea 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 358 50.575 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AYJ52_00130 88f8e193015cd79286faaf35b83257ea 359 Gene3D G3DSA:3.90.1150.10 250 359 6.8E-45 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_16960 3df26ef06cd3f96996807f89119ab4be 263 Pfam PF07103 Protein of unknown function (DUF1365) 11 256 1.8E-51 T 11-10-2018 IPR010775 Protein of unknown function DUF1365 AYJ52_09495 6f6d1ebccb7461377fb0adda072b4e97 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 177 4.5E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_09495 6f6d1ebccb7461377fb0adda072b4e97 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 4.0E-28 T 11-10-2018 AYJ52_09495 6f6d1ebccb7461377fb0adda072b4e97 224 Gene3D G3DSA:3.40.50.1000 6 205 2.5E-60 T 11-10-2018 IPR023214 HAD superfamily AYJ52_09495 6f6d1ebccb7461377fb0adda072b4e97 224 Gene3D G3DSA:1.10.150.240 17 84 2.5E-60 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ52_09495 6f6d1ebccb7461377fb0adda072b4e97 224 SUPERFAMILY SSF56784 1 217 8.4E-55 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_07845 a529f48b26e945d3ef597c2dd5a3c070 408 SMART SM00825 Beta-ketoacyl synthase 4 408 9.4E-12 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AYJ52_07845 a529f48b26e945d3ef597c2dd5a3c070 408 SUPERFAMILY SSF53901 214 406 1.48E-60 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_07845 a529f48b26e945d3ef597c2dd5a3c070 408 Gene3D G3DSA:3.40.47.10 1 254 2.6E-60 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_07845 a529f48b26e945d3ef597c2dd5a3c070 408 Gene3D G3DSA:3.40.47.10 260 407 4.8E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_07845 a529f48b26e945d3ef597c2dd5a3c070 408 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AYJ52_07845 a529f48b26e945d3ef597c2dd5a3c070 408 SUPERFAMILY SSF53901 1 251 1.34E-54 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_07845 a529f48b26e945d3ef597c2dd5a3c070 408 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 362 3.0E-29 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AYJ52_07845 a529f48b26e945d3ef597c2dd5a3c070 408 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 8.7E-41 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AYJ52_15040 e9de606f5864f2f9cba3bbf6cee1159b 304 Pfam PF14525 AraC-binding-like domain 12 129 1.3E-6 T 11-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AYJ52_15040 e9de606f5864f2f9cba3bbf6cee1159b 304 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 295 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AYJ52_15040 e9de606f5864f2f9cba3bbf6cee1159b 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 299 4.1E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_15040 e9de606f5864f2f9cba3bbf6cee1159b 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 283 4.1E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_15040 e9de606f5864f2f9cba3bbf6cee1159b 304 SMART SM00342 214 299 8.2E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_15040 e9de606f5864f2f9cba3bbf6cee1159b 304 Gene3D G3DSA:1.10.10.60 192 303 1.2E-28 T 11-10-2018 AYJ52_15040 e9de606f5864f2f9cba3bbf6cee1159b 304 SUPERFAMILY SSF46689 250 302 9.41E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_15040 e9de606f5864f2f9cba3bbf6cee1159b 304 Pfam PF12833 Helix-turn-helix domain 220 300 1.1E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_18650 1fbcce8f15ee4041fa522879992f7d6a 138 Pfam PF03061 Thioesterase superfamily 47 118 3.6E-10 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AYJ52_18650 1fbcce8f15ee4041fa522879992f7d6a 138 SUPERFAMILY SSF54637 22 135 3.54E-24 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_18650 1fbcce8f15ee4041fa522879992f7d6a 138 Gene3D G3DSA:3.10.129.10 4 138 9.6E-50 T 11-10-2018 AYJ52_12360 876b5bd272ecbf83fbcdbb3bdabc1c4e 262 SUPERFAMILY SSF52096 10 261 7.47E-86 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_12360 876b5bd272ecbf83fbcdbb3bdabc1c4e 262 Gene3D G3DSA:1.10.12.10 205 261 5.1E-21 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AYJ52_12360 876b5bd272ecbf83fbcdbb3bdabc1c4e 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AYJ52_12360 876b5bd272ecbf83fbcdbb3bdabc1c4e 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 261 3.2E-75 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_12360 876b5bd272ecbf83fbcdbb3bdabc1c4e 262 Gene3D G3DSA:3.90.226.10 8 204 7.9E-70 T 11-10-2018 AYJ52_10640 abe534cb5ef554e05c9747c8b9775bbc 213 Pfam PF01545 Cation efflux family 24 198 1.7E-11 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_10640 abe534cb5ef554e05c9747c8b9775bbc 213 SUPERFAMILY SSF161111 19 199 2.35E-34 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_10640 abe534cb5ef554e05c9747c8b9775bbc 213 Gene3D G3DSA:1.20.1510.10 77 201 7.8E-6 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_02510 440cba68461f962a72f10dc044a40595 684 Pfam PF01432 Peptidase family M3 226 675 6.3E-149 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AYJ52_02510 440cba68461f962a72f10dc044a40595 684 SUPERFAMILY SSF55486 14 676 4.03E-187 T 11-10-2018 AYJ52_02510 440cba68461f962a72f10dc044a40595 684 Gene3D G3DSA:1.10.1370.10 145 609 3.0E-245 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AYJ52_02510 440cba68461f962a72f10dc044a40595 684 Gene3D G3DSA:1.10.1370.40 17 674 3.0E-245 T 11-10-2018 AYJ52_12465 ed7c2b9da12776a0526c9f3fde368eec 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_12465 ed7c2b9da12776a0526c9f3fde368eec 451 Gene3D G3DSA:1.20.1250.20 20 431 1.1E-74 T 11-10-2018 AYJ52_12465 ed7c2b9da12776a0526c9f3fde368eec 451 Pfam PF07690 Major Facilitator Superfamily 29 309 4.5E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_12465 ed7c2b9da12776a0526c9f3fde368eec 451 SUPERFAMILY SSF103473 9 433 3.4E-84 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_11745 3cf34d785fb4d498e9736dc0a11280a3 344 SUPERFAMILY SSF46689 296 343 5.38E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11745 3cf34d785fb4d498e9736dc0a11280a3 344 Pfam PF12833 Helix-turn-helix domain 268 343 1.9E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_11745 3cf34d785fb4d498e9736dc0a11280a3 344 SMART SM00342 261 343 2.4E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_11745 3cf34d785fb4d498e9736dc0a11280a3 344 Gene3D G3DSA:1.10.10.60 239 344 5.4E-24 T 11-10-2018 AYJ52_11745 3cf34d785fb4d498e9736dc0a11280a3 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 35 216 1.8E-41 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_11450 ee3610d01e420e1e4bda07a77a0fac2d 421 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 413 2.8E-70 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AYJ52_11450 ee3610d01e420e1e4bda07a77a0fac2d 421 Pfam PF02601 Exonuclease VII, large subunit 137 363 2.0E-46 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AYJ52_11450 ee3610d01e420e1e4bda07a77a0fac2d 421 Pfam PF13742 OB-fold nucleic acid binding domain 6 113 9.7E-14 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AYJ52_10145 7c3c5ce69494fe229fc63a011d3672fb 193 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 4 185 1.0E-25 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AYJ52_10145 7c3c5ce69494fe229fc63a011d3672fb 193 Pfam PF04973 Nicotinamide mononucleotide transporter 3 181 8.6E-45 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AYJ52_12715 b72f502df9cf4aa45ee597adf0c58040 283 Gene3D G3DSA:3.90.226.10 4 241 1.0E-50 T 11-10-2018 AYJ52_12715 b72f502df9cf4aa45ee597adf0c58040 283 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 12 282 1.3E-118 T 11-10-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 AYJ52_12715 b72f502df9cf4aa45ee597adf0c58040 283 SUPERFAMILY SSF52096 8 232 1.69E-36 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_12715 b72f502df9cf4aa45ee597adf0c58040 283 Pfam PF01039 Carboxyl transferase domain 17 273 3.3E-15 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AYJ52_05635 0870c1b3fcdef44d517d84110cd1db48 183 PRINTS PR01549 Autoinducer synthesis protein signature 62 80 1.3E-18 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AYJ52_05635 0870c1b3fcdef44d517d84110cd1db48 183 PRINTS PR01549 Autoinducer synthesis protein signature 123 144 1.3E-18 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AYJ52_05635 0870c1b3fcdef44d517d84110cd1db48 183 PRINTS PR01549 Autoinducer synthesis protein signature 145 166 1.3E-18 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AYJ52_05635 0870c1b3fcdef44d517d84110cd1db48 183 PRINTS PR01549 Autoinducer synthesis protein signature 18 37 1.3E-18 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AYJ52_05635 0870c1b3fcdef44d517d84110cd1db48 183 PRINTS PR01549 Autoinducer synthesis protein signature 38 60 1.3E-18 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AYJ52_05635 0870c1b3fcdef44d517d84110cd1db48 183 SUPERFAMILY SSF55729 19 183 1.97E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_05635 0870c1b3fcdef44d517d84110cd1db48 183 Pfam PF00765 Autoinducer synthase 19 179 5.5E-26 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AYJ52_05635 0870c1b3fcdef44d517d84110cd1db48 183 Gene3D G3DSA:3.40.630.30 3 183 5.1E-48 T 11-10-2018 AYJ52_11765 f78562465edfacfb496d13012964a04f 155 SMART SM00344 6 115 7.4E-26 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_11765 f78562465edfacfb496d13012964a04f 155 Gene3D G3DSA:3.30.70.920 60 154 3.8E-13 T 11-10-2018 AYJ52_11765 f78562465edfacfb496d13012964a04f 155 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 1.3E-12 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ52_11765 f78562465edfacfb496d13012964a04f 155 SUPERFAMILY SSF46785 5 65 9.11E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_11765 f78562465edfacfb496d13012964a04f 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.2E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_11765 f78562465edfacfb496d13012964a04f 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.2E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_11765 f78562465edfacfb496d13012964a04f 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.2E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_11765 f78562465edfacfb496d13012964a04f 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 5.7E-15 T 11-10-2018 AYJ52_11765 f78562465edfacfb496d13012964a04f 155 Gene3D G3DSA:1.10.10.10 1 59 3.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_11765 f78562465edfacfb496d13012964a04f 155 SUPERFAMILY SSF54909 68 150 4.16E-12 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_06495 44d88dee39968e159ff95a5d4c32e6b2 301 Pfam PF00892 EamA-like transporter family 162 296 4.3E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_06495 44d88dee39968e159ff95a5d4c32e6b2 301 Pfam PF00892 EamA-like transporter family 12 144 3.5E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_06495 44d88dee39968e159ff95a5d4c32e6b2 301 SUPERFAMILY SSF103481 62 148 3.27E-8 T 11-10-2018 AYJ52_06495 44d88dee39968e159ff95a5d4c32e6b2 301 SUPERFAMILY SSF103481 202 297 6.8E-12 T 11-10-2018 AYJ52_14400 3281c2296c2decc86dab9e791cac40f3 853 Gene3D G3DSA:2.60.40.3110 285 374 9.2E-37 T 11-10-2018 AYJ52_14400 3281c2296c2decc86dab9e791cac40f3 853 Pfam PF13954 PapC N-terminal domain 47 192 4.2E-44 T 11-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AYJ52_14400 3281c2296c2decc86dab9e791cac40f3 853 SUPERFAMILY SSF141729 68 184 5.36E-34 T 11-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AYJ52_14400 3281c2296c2decc86dab9e791cac40f3 853 Pfam PF00577 Outer membrane usher protein 213 762 2.2E-161 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AYJ52_14400 3281c2296c2decc86dab9e791cac40f3 853 Gene3D G3DSA:2.60.40.2070 770 853 1.4E-17 T 11-10-2018 AYJ52_14400 3281c2296c2decc86dab9e791cac40f3 853 Gene3D G3DSA:3.10.20.410 45 170 2.4E-34 T 11-10-2018 AYJ52_14400 3281c2296c2decc86dab9e791cac40f3 853 Gene3D G3DSA:2.60.40.2610 677 767 1.3E-29 T 11-10-2018 AYJ52_14400 3281c2296c2decc86dab9e791cac40f3 853 Pfam PF13953 PapC C-terminal domain 772 835 2.8E-19 T 11-10-2018 IPR025949 PapC-like, C-terminal domain AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 SUPERFAMILY SSF82679 1 112 2.09E-37 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 9.9E-16 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 9.9E-16 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 9.9E-16 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 Gene3D G3DSA:3.30.70.940 1 117 1.3E-45 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 SMART SM00738 1 110 1.3E-42 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 Pfam PF02357 Transcription termination factor nusG 2 107 1.2E-27 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 175 2.9E-62 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 Gene3D G3DSA:2.30.30.30 118 175 1.2E-19 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 SMART SM00739 122 149 0.0029 T 11-10-2018 IPR005824 KOW AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 176 22.734 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AYJ52_06625 b1e07c28c9672ebb6aa7a7ea46f05279 177 SUPERFAMILY SSF50104 120 175 4.21E-15 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AYJ52_03250 dd769c13c6c674456885d7b5831fcf5f 175 Gene3D G3DSA:2.30.30.830 77 171 1.6E-28 T 11-10-2018 AYJ52_03250 dd769c13c6c674456885d7b5831fcf5f 175 Pfam PF04351 Pilus assembly protein, PilP 27 170 1.3E-43 T 11-10-2018 IPR007446 Pilus assembly protein PilP AYJ52_03250 dd769c13c6c674456885d7b5831fcf5f 175 PIRSF PIRSF016481 1 172 1.1E-37 T 11-10-2018 IPR007446 Pilus assembly protein PilP AYJ52_15600 8585a076936c7f6f4ab85c2c07753397 416 Pfam PF00266 Aminotransferase class-V 78 322 4.5E-17 T 11-10-2018 IPR000192 Aminotransferase class V domain AYJ52_15600 8585a076936c7f6f4ab85c2c07753397 416 TIGRFAM TIGR01814 kynureninase: kynureninase 10 399 1.3E-103 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AYJ52_15600 8585a076936c7f6f4ab85c2c07753397 416 Gene3D G3DSA:3.90.1150.10 11 399 1.9E-160 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_15600 8585a076936c7f6f4ab85c2c07753397 416 SUPERFAMILY SSF53383 4 399 7.15E-78 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_15600 8585a076936c7f6f4ab85c2c07753397 416 PIRSF PIRSF038800 1 407 2.7E-144 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AYJ52_15600 8585a076936c7f6f4ab85c2c07753397 416 Gene3D G3DSA:3.40.640.10 41 303 1.9E-160 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_15600 8585a076936c7f6f4ab85c2c07753397 416 Hamap MF_01970 Kynureninase [kynU]. 1 399 33.895 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AYJ52_09340 1c2dac911c140787ed5758265ad7cb44 314 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 49.296 T 11-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AYJ52_09340 1c2dac911c140787ed5758265ad7cb44 314 Gene3D G3DSA:3.20.20.70 1 241 8.4E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_09340 1c2dac911c140787ed5758265ad7cb44 314 Gene3D G3DSA:1.20.225.30 244 313 8.7E-11 T 11-10-2018 AYJ52_09340 1c2dac911c140787ed5758265ad7cb44 314 Pfam PF01207 Dihydrouridine synthase (Dus) 4 307 6.0E-73 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AYJ52_09340 1c2dac911c140787ed5758265ad7cb44 314 PIRSF PIRSF006621 1 313 3.7E-76 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AYJ52_09340 1c2dac911c140787ed5758265ad7cb44 314 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AYJ52_09340 1c2dac911c140787ed5758265ad7cb44 314 SUPERFAMILY SSF51395 2 308 5.31E-69 T 11-10-2018 AYJ52_13895 0d96e72f4b223026145c9e72ca1c61f6 361 Gene3D G3DSA:3.40.50.1820 36 360 2.1E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_13895 0d96e72f4b223026145c9e72ca1c61f6 361 SUPERFAMILY SSF53474 52 354 1.17E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_13895 0d96e72f4b223026145c9e72ca1c61f6 361 Pfam PF00561 alpha/beta hydrolase fold 74 336 5.3E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_03955 96183d57357d7513b55d03543c705c35 655 ProSitePatterns PS01303 BCCT family of transporters signature. 316 325 - T 11-10-2018 IPR018093 BCCT transporter, conserved site AYJ52_03955 96183d57357d7513b55d03543c705c35 655 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 497 5.4E-165 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AYJ52_03955 96183d57357d7513b55d03543c705c35 655 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 496 9.8E-193 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AYJ52_07735 ace39f72d096329a65b06a4a072b3209 371 Pfam PF04551 GcpE protein 11 352 8.0E-133 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AYJ52_07735 ace39f72d096329a65b06a4a072b3209 371 Gene3D G3DSA:3.20.20.20 1 260 1.8E-103 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_07735 ace39f72d096329a65b06a4a072b3209 371 PIRSF PIRSF004640 1 362 1.2E-146 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AYJ52_07735 ace39f72d096329a65b06a4a072b3209 371 SUPERFAMILY SSF56014 264 352 5.79E-14 T 11-10-2018 AYJ52_07735 ace39f72d096329a65b06a4a072b3209 371 SUPERFAMILY SSF51717 15 208 1.65E-10 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AYJ52_07735 ace39f72d096329a65b06a4a072b3209 371 Gene3D G3DSA:3.30.413.10 261 361 1.8E-27 T 11-10-2018 AYJ52_07735 ace39f72d096329a65b06a4a072b3209 371 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 8 351 4.5E-130 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AYJ52_07735 ace39f72d096329a65b06a4a072b3209 371 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 6 356 34.636 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AYJ52_19715 c8601f27664fa410f3bc88d3dd6a20b6 275 Gene3D G3DSA:1.10.10.60 217 273 7.9E-13 T 11-10-2018 AYJ52_19715 c8601f27664fa410f3bc88d3dd6a20b6 275 SUPERFAMILY SSF46689 219 268 7.17E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_19715 c8601f27664fa410f3bc88d3dd6a20b6 275 Gene3D G3DSA:1.10.10.60 167 216 6.8E-9 T 11-10-2018 AYJ52_19715 c8601f27664fa410f3bc88d3dd6a20b6 275 SMART SM00342 183 265 3.3E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_19715 c8601f27664fa410f3bc88d3dd6a20b6 275 Pfam PF02311 AraC-like ligand binding domain 14 146 1.3E-19 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AYJ52_19715 c8601f27664fa410f3bc88d3dd6a20b6 275 SUPERFAMILY SSF46689 171 217 5.38E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_19715 c8601f27664fa410f3bc88d3dd6a20b6 275 SUPERFAMILY SSF51215 19 149 3.01E-18 T 11-10-2018 IPR037923 Transcription regulator HTH-like AYJ52_19715 c8601f27664fa410f3bc88d3dd6a20b6 275 Pfam PF12833 Helix-turn-helix domain 193 266 7.2E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 SMART SM00729 137 362 9.6E-54 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 Gene3D G3DSA:3.80.30.20 135 376 7.9E-72 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 438 1.1E-180 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 Pfam PF04055 Radical SAM superfamily 143 320 1.3E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 438 4.8E-104 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 Pfam PF00919 Uncharacterized protein family UPF0004 5 95 9.7E-21 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 Gene3D G3DSA:3.40.50.12160 5 125 1.6E-28 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 SUPERFAMILY SSF102114 120 367 2.75E-52 T 11-10-2018 AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 Gene3D G3DSA:2.40.50.140 377 446 1.9E-19 T 11-10-2018 AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AYJ52_15705 d6a23134a1f67c4bffabe62ccd2943c8 447 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 4 441 61.347 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 8.1E-45 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 PIRSF PIRSF002560 1 154 1.9E-58 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 Pfam PF00210 Ferritin-like domain 8 143 2.0E-34 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 3 22 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 85 105 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 23 43 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 44 64 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 106 126 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 PRINTS PR00601 Bacterioferritin signature 128 149 5.0E-41 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 SUPERFAMILY SSF47240 1 154 1.21E-45 T 11-10-2018 IPR009078 Ferritin-like superfamily AYJ52_09390 6cc8852d14123c849d71c6120fab7b3b 154 Gene3D G3DSA:1.20.1260.10 1 154 6.3E-59 T 11-10-2018 IPR012347 Ferritin-like AYJ52_17705 b20c9510171e8aa900a3cfe0b57cb1f0 435 Gene3D G3DSA:3.40.50.1820 318 427 1.1E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17705 b20c9510171e8aa900a3cfe0b57cb1f0 435 Pfam PF03583 Secretory lipase 120 218 1.8E-4 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AYJ52_17705 b20c9510171e8aa900a3cfe0b57cb1f0 435 SUPERFAMILY SSF53474 61 403 1.5E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17705 b20c9510171e8aa900a3cfe0b57cb1f0 435 PIRSF PIRSF029171 26 415 7.8E-74 T 11-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 AYJ52_17705 b20c9510171e8aa900a3cfe0b57cb1f0 435 Gene3D G3DSA:3.40.50.1820 27 278 5.6E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_08390 13ec0828d9a0389b4210044ebe25a6dd 484 SUPERFAMILY SSF52467 308 480 4.25E-74 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AYJ52_08390 13ec0828d9a0389b4210044ebe25a6dd 484 Gene3D G3DSA:3.40.50.1220 301 480 7.9E-82 T 11-10-2018 AYJ52_08390 13ec0828d9a0389b4210044ebe25a6dd 484 PIRSF PIRSF000204 3 481 1.1E-190 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AYJ52_08390 13ec0828d9a0389b4210044ebe25a6dd 484 Pfam PF02233 NAD(P) transhydrogenase beta subunit 10 477 7.6E-183 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AYJ52_03395 182d5f2249c2965183d0e9e5a72eecba 203 Pfam PF04191 Phospholipid methyltransferase 43 136 2.5E-12 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AYJ52_03395 182d5f2249c2965183d0e9e5a72eecba 203 Gene3D G3DSA:1.20.120.1630 6 151 1.2E-21 T 11-10-2018 AYJ52_05175 3f64398c3ee63f98815a3505f950c771 265 SUPERFAMILY SSF161098 63 245 4.71E-35 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_05175 3f64398c3ee63f98815a3505f950c771 265 Gene3D G3DSA:1.10.3720.10 55 258 3.6E-28 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_05175 3f64398c3ee63f98815a3505f950c771 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 254 7.6E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 Gene3D G3DSA:3.30.160.40 223 308 6.6E-29 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 229 297 8.2E-19 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 8 214 5.9E-80 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 8 299 2.2E-114 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 SUPERFAMILY SSF54782 223 308 5.49E-26 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 7 299 39.431 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 Gene3D G3DSA:3.40.190.10 8 212 4.5E-86 T 11-10-2018 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 Gene3D G3DSA:3.40.190.10 105 204 4.5E-86 T 11-10-2018 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 233 249 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 SUPERFAMILY SSF53850 6 220 5.05E-86 T 11-10-2018 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 PIRSF PIRSF001438 2 309 3.9E-123 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 PRINTS PR00151 Porphobilinogen deaminase signature 47 67 1.2E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 PRINTS PR00151 Porphobilinogen deaminase signature 145 162 1.2E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 PRINTS PR00151 Porphobilinogen deaminase signature 78 97 1.2E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 PRINTS PR00151 Porphobilinogen deaminase signature 232 249 1.2E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06530 33b5dfdb037798814f4d65d0be29d515 309 PRINTS PR00151 Porphobilinogen deaminase signature 126 143 1.2E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_15420 7542aa43ece6452002e3e72b096c6b4a 381 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 364 4.1E-103 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AYJ52_15420 7542aa43ece6452002e3e72b096c6b4a 381 PIRSF PIRSF000267 2 380 6.8E-118 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AYJ52_15420 7542aa43ece6452002e3e72b096c6b4a 381 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 381 3.2E-149 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AYJ52_09010 d17a5ce6f04b461093ab96cac0d1aed7 163 Gene3D G3DSA:2.30.110.10 1 161 3.0E-44 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AYJ52_09010 d17a5ce6f04b461093ab96cac0d1aed7 163 SUPERFAMILY SSF50475 6 159 3.24E-45 T 11-10-2018 AYJ52_09010 d17a5ce6f04b461093ab96cac0d1aed7 163 Pfam PF01613 Flavin reductase like domain 11 158 1.4E-33 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AYJ52_09010 d17a5ce6f04b461093ab96cac0d1aed7 163 SMART SM00903 11 156 1.1E-52 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AYJ52_01320 b4793503d1f8905f098bf33ac651af51 115 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 3.8E-27 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AYJ52_01465 b4793503d1f8905f098bf33ac651af51 115 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 3.8E-27 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AYJ52_08105 b4793503d1f8905f098bf33ac651af51 115 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 3.8E-27 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AYJ52_00390 b4793503d1f8905f098bf33ac651af51 115 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 3.8E-27 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AYJ52_10790 b4793503d1f8905f098bf33ac651af51 115 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 3.8E-27 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AYJ52_00040 b4793503d1f8905f098bf33ac651af51 115 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 79 3.8E-27 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AYJ52_11050 48a9f458928db87e4818d2293d8885ba 426 Gene3D G3DSA:2.40.160.10 25 426 4.5E-149 T 11-10-2018 IPR023614 Porin domain superfamily AYJ52_11050 48a9f458928db87e4818d2293d8885ba 426 Pfam PF03573 outer membrane porin, OprD family 23 426 1.4E-104 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AYJ52_06755 1aefa46d8551dc416fbaee7105bbf719 304 Gene3D G3DSA:2.60.120.330 44 229 1.7E-43 T 11-10-2018 IPR027443 Isopenicillin N synthase-like AYJ52_06755 1aefa46d8551dc416fbaee7105bbf719 304 SUPERFAMILY SSF51197 100 224 4.67E-17 T 11-10-2018 AYJ52_06755 1aefa46d8551dc416fbaee7105bbf719 304 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 1.2E-47 T 11-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AYJ52_14595 4fcf40674e8d4d7fe172693ee4160682 262 Gene3D G3DSA:1.10.10.60 155 260 2.6E-20 T 11-10-2018 AYJ52_14595 4fcf40674e8d4d7fe172693ee4160682 262 SUPERFAMILY SSF51182 21 210 1.19E-11 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_14595 4fcf40674e8d4d7fe172693ee4160682 262 Gene3D G3DSA:2.60.120.10 18 97 3.9E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_14595 4fcf40674e8d4d7fe172693ee4160682 262 Pfam PF12833 Helix-turn-helix domain 176 254 3.1E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_14595 4fcf40674e8d4d7fe172693ee4160682 262 Pfam PF02311 AraC-like ligand binding domain 30 138 4.3E-6 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AYJ52_14595 4fcf40674e8d4d7fe172693ee4160682 262 SMART SM00342 170 252 1.2E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_14595 4fcf40674e8d4d7fe172693ee4160682 262 SUPERFAMILY SSF46689 210 257 3.4E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_05190 9f920771cfc9c0f83966866b1b5e9d8b 322 Gene3D G3DSA:3.40.190.10 118 217 2.3E-107 T 11-10-2018 AYJ52_05190 9f920771cfc9c0f83966866b1b5e9d8b 322 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 40 318 1.2E-72 T 11-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AYJ52_05190 9f920771cfc9c0f83966866b1b5e9d8b 322 Gene3D G3DSA:1.10.8.450 249 281 2.3E-107 T 11-10-2018 AYJ52_05190 9f920771cfc9c0f83966866b1b5e9d8b 322 Gene3D G3DSA:3.40.190.10 39 311 2.3E-107 T 11-10-2018 AYJ52_05190 9f920771cfc9c0f83966866b1b5e9d8b 322 Pfam PF09084 NMT1/THI5 like 63 258 8.8E-18 T 11-10-2018 IPR015168 SsuA/THI5-like AYJ52_05190 9f920771cfc9c0f83966866b1b5e9d8b 322 SMART SM00062 38 254 1.8E-25 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_05190 9f920771cfc9c0f83966866b1b5e9d8b 322 SUPERFAMILY SSF53850 37 268 4.46E-51 T 11-10-2018 AYJ52_05315 1e5de71f6aed7d6379dde9f63d032dee 369 Gene3D G3DSA:3.40.50.2000 184 355 7.5E-50 T 11-10-2018 AYJ52_05315 1e5de71f6aed7d6379dde9f63d032dee 369 SUPERFAMILY SSF53756 4 368 4.92E-55 T 11-10-2018 AYJ52_05315 1e5de71f6aed7d6379dde9f63d032dee 369 Gene3D G3DSA:3.40.50.2000 74 365 7.5E-50 T 11-10-2018 AYJ52_05315 1e5de71f6aed7d6379dde9f63d032dee 369 Pfam PF00534 Glycosyl transferases group 1 190 345 6.9E-29 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AYJ52_18480 1b0e08c768805cbf186cb30677b8c835 233 Pfam PF01988 VIT family 18 225 1.2E-53 T 11-10-2018 IPR008217 Ccc1 family AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 PIRSF PIRSF037420 1 355 6.1E-144 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 Gene3D G3DSA:3.20.20.70 11 293 3.3E-51 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 SMART SM00729 9 212 2.2E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 Pfam PF13353 4Fe-4S single cluster domain 16 100 3.4E-7 T 11-10-2018 AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 Pfam PF13186 Iron-sulfur cluster-binding domain 242 307 4.1E-9 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 Pfam PF04055 Radical SAM superfamily 15 170 5.4E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 249 334 4.8E-8 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 SUPERFAMILY SSF102114 8 316 7.32E-77 T 11-10-2018 AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 15 26 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 4 363 1.2E-190 T 11-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AYJ52_14310 a7ad7490e034df44b0332d4393faf7eb 384 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 374 188.395 T 11-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AYJ52_08425 25e32aa662a8e6631113e31695857f78 310 SUPERFAMILY SSF53686 14 300 1.2E-92 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_08425 25e32aa662a8e6631113e31695857f78 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 17 303 6.2E-122 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AYJ52_08425 25e32aa662a8e6631113e31695857f78 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 41 59 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AYJ52_08425 25e32aa662a8e6631113e31695857f78 310 TIGRFAM TIGR01138 cysM: cysteine synthase B 16 303 5.6E-147 T 11-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AYJ52_08425 25e32aa662a8e6631113e31695857f78 310 Gene3D G3DSA:3.40.50.1100 19 299 4.4E-110 T 11-10-2018 AYJ52_08425 25e32aa662a8e6631113e31695857f78 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 292 1.8E-67 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_08425 25e32aa662a8e6631113e31695857f78 310 Gene3D G3DSA:3.40.50.1100 46 151 4.4E-110 T 11-10-2018 AYJ52_12825 f2445ba84b6ad1ec3594a9a9f5aa4bf3 246 SMART SM00895 93 216 1.1E-18 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_12825 f2445ba84b6ad1ec3594a9a9f5aa4bf3 246 SMART SM00345 25 83 8.6E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12825 f2445ba84b6ad1ec3594a9a9f5aa4bf3 246 SUPERFAMILY SSF46785 21 87 4.08E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12825 f2445ba84b6ad1ec3594a9a9f5aa4bf3 246 SUPERFAMILY SSF48008 90 221 1.57E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_12825 f2445ba84b6ad1ec3594a9a9f5aa4bf3 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 83 1.0E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12825 f2445ba84b6ad1ec3594a9a9f5aa4bf3 246 Gene3D G3DSA:1.10.10.10 6 84 1.1E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12825 f2445ba84b6ad1ec3594a9a9f5aa4bf3 246 Pfam PF07729 FCD domain 93 215 1.4E-22 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_12825 f2445ba84b6ad1ec3594a9a9f5aa4bf3 246 Gene3D G3DSA:1.20.120.530 87 227 2.9E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 SUPERFAMILY SSF46689 259 310 5.82E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 290 5.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 290 306 5.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 SMART SM00342 223 306 1.9E-29 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 SUPERFAMILY SSF46689 209 256 1.88E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 Gene3D G3DSA:3.40.50.880 1 204 1.3E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 Pfam PF12833 Helix-turn-helix domain 229 307 2.0E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 Gene3D G3DSA:1.10.10.60 205 310 1.2E-31 T 11-10-2018 AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 SUPERFAMILY SSF52317 1 188 4.58E-44 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 Pfam PF01965 DJ-1/PfpI family 4 169 1.9E-16 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AYJ52_03430 1c0d26d601371337c183553c8b187aeb 315 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 302 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AYJ52_01475 5b8ae4761f359d54ce9f7a76c2344fde 692 SMART SM00283 428 689 1.4E-88 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AYJ52_01475 5b8ae4761f359d54ce9f7a76c2344fde 692 Gene3D G3DSA:1.10.287.950 365 691 4.2E-65 T 11-10-2018 AYJ52_01475 5b8ae4761f359d54ce9f7a76c2344fde 692 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 555 584 5.5E-7 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AYJ52_01475 5b8ae4761f359d54ce9f7a76c2344fde 692 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 5.5E-7 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AYJ52_01475 5b8ae4761f359d54ce9f7a76c2344fde 692 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 657 7.8E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AYJ52_01475 5b8ae4761f359d54ce9f7a76c2344fde 692 SUPERFAMILY SSF58104 388 690 1.11E-70 T 11-10-2018 AYJ52_05215 bac7b904a17750a8aa288344a4005eee 232 Gene3D G3DSA:1.10.150.240 16 84 5.1E-51 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ52_05215 bac7b904a17750a8aa288344a4005eee 232 SUPERFAMILY SSF56784 1 217 6.46E-54 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_05215 bac7b904a17750a8aa288344a4005eee 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 184 3.2E-35 T 11-10-2018 AYJ52_05215 bac7b904a17750a8aa288344a4005eee 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.4E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_05215 bac7b904a17750a8aa288344a4005eee 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 2.4E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_05215 bac7b904a17750a8aa288344a4005eee 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 2.4E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_05215 bac7b904a17750a8aa288344a4005eee 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 2.4E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_05215 bac7b904a17750a8aa288344a4005eee 232 Gene3D G3DSA:3.40.50.1000 4 191 5.1E-51 T 11-10-2018 IPR023214 HAD superfamily AYJ52_05215 bac7b904a17750a8aa288344a4005eee 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 178 5.4E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_05215 bac7b904a17750a8aa288344a4005eee 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 184 4.4E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 2.9E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 2.9E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.9E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 PRINTS PR01703 Manganese superoxide dismutase signature 71 84 2.9E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 2.9E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 PIRSF PIRSF000349 1 206 5.6E-83 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 Gene3D G3DSA:1.10.287.990 21 87 1.7E-25 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 SUPERFAMILY SSF54719 90 199 8.9E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 197 5.1E-37 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 SUPERFAMILY SSF46609 3 89 2.09E-36 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 Gene3D G3DSA:2.40.500.20 88 204 1.2E-41 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_17675 4fae6533ff638fd4fbb24e1e2deb4c6c 208 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 5 88 1.8E-33 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AYJ52_09490 97e937fc18ff77f5c0c5384a51e4dd3a 255 SUPERFAMILY SSF53613 2 240 9.17E-60 T 11-10-2018 IPR029056 Ribokinase-like AYJ52_09490 97e937fc18ff77f5c0c5384a51e4dd3a 255 Gene3D G3DSA:3.40.1190.20 1 237 2.4E-78 T 11-10-2018 IPR029056 Ribokinase-like AYJ52_09490 97e937fc18ff77f5c0c5384a51e4dd3a 255 Pfam PF08543 Phosphomethylpyrimidine kinase 12 241 2.1E-67 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AYJ52_00895 6f74c26a654a4777310b7232166a9919 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_00895 6f74c26a654a4777310b7232166a9919 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 9.2E-42 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00895 6f74c26a654a4777310b7232166a9919 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.7E-40 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00895 6f74c26a654a4777310b7232166a9919 103 SUPERFAMILY SSF141091 1 101 1.83E-39 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00895 6f74c26a654a4777310b7232166a9919 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.256 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_04725 766371709496db1d884f992eaa2c3b32 396 Pfam PF07690 Major Facilitator Superfamily 14 333 6.6E-29 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_04725 766371709496db1d884f992eaa2c3b32 396 SUPERFAMILY SSF103473 8 383 3.4E-51 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_04725 766371709496db1d884f992eaa2c3b32 396 Gene3D G3DSA:1.20.1250.20 1 382 5.8E-40 T 11-10-2018 AYJ52_03530 e4a1fc5ca96e52493098aa32c34d649e 563 SUPERFAMILY SSF52540 350 559 7.23E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_03530 e4a1fc5ca96e52493098aa32c34d649e 563 Pfam PF00005 ABC transporter 369 518 4.4E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_03530 e4a1fc5ca96e52493098aa32c34d649e 563 Gene3D G3DSA:3.40.50.300 340 561 1.4E-48 T 11-10-2018 AYJ52_03530 e4a1fc5ca96e52493098aa32c34d649e 563 Pfam PF00664 ABC transporter transmembrane region 31 311 3.6E-13 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AYJ52_03530 e4a1fc5ca96e52493098aa32c34d649e 563 SUPERFAMILY SSF90123 24 335 1.83E-34 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_03530 e4a1fc5ca96e52493098aa32c34d649e 563 SMART SM00382 377 562 6.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_03530 e4a1fc5ca96e52493098aa32c34d649e 563 Gene3D G3DSA:1.20.1560.10 7 339 1.1E-33 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_03530 e4a1fc5ca96e52493098aa32c34d649e 563 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_08490 64b7fb12180b185432bb47098382350a 178 PIRSF PIRSF016183 3 177 3.4E-41 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AYJ52_08490 64b7fb12180b185432bb47098382350a 178 Gene3D G3DSA:1.10.60.30 29 106 1.3E-19 T 11-10-2018 AYJ52_08490 64b7fb12180b185432bb47098382350a 178 Pfam PF04751 Protein of unknown function (DUF615) 19 151 3.0E-33 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AYJ52_08490 64b7fb12180b185432bb47098382350a 178 SUPERFAMILY SSF158710 30 170 9.55E-36 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily AYJ52_08000 7c626621f76edd8e6c22ce2e552cdcbe 1317 Pfam PF17210 SdrD B-like domain 984 1038 6.0E-8 T 11-10-2018 IPR033764 SD-repeat containing protein, B domain AYJ52_08000 7c626621f76edd8e6c22ce2e552cdcbe 1317 SUPERFAMILY SSF117074 962 1048 5.49E-7 T 11-10-2018 AYJ52_08000 7c626621f76edd8e6c22ce2e552cdcbe 1317 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1238 1274 2.8E-7 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_08000 7c626621f76edd8e6c22ce2e552cdcbe 1317 Pfam PF01345 Domain of unknown function DUF11 1236 1313 1.6E-6 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_08000 7c626621f76edd8e6c22ce2e552cdcbe 1317 Gene3D G3DSA:2.60.40.10 962 1096 1.4E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 Pfam PF14814 Bifunctional transglycosylase second domain 58 141 7.3E-21 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 Pfam PF00912 Transglycosylase 153 323 2.3E-59 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 157 694 8.3E-156 T 11-10-2018 AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 Gene3D G3DSA:3.40.710.10 48 705 1.2E-244 T 11-10-2018 AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 SUPERFAMILY SSF56601 305 750 7.8E-115 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 Gene3D G3DSA:1.10.3810.10 145 347 1.2E-244 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 Gene3D G3DSA:3.30.2060.10 56 144 1.2E-244 T 11-10-2018 AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 20 734 2.6E-241 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 PIRSF PIRSF002799 1 785 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 Pfam PF00905 Penicillin binding protein transpeptidase domain 418 680 7.1E-27 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AYJ52_17375 d7f14d258f014d9a10d751560b5be0dd 798 SUPERFAMILY SSF53955 146 345 3.66E-68 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_18880 174afb4fcfc9171296f8d6003095ecb8 286 SUPERFAMILY SSF110710 1 266 3.14E-76 T 11-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like AYJ52_18880 174afb4fcfc9171296f8d6003095ecb8 286 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 23 263 9.6E-59 T 11-10-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 AYJ52_04345 bf5b041be9b5aa458204c7c99bd96746 384 SUPERFAMILY SSF53383 3 383 2.31E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_04345 bf5b041be9b5aa458204c7c99bd96746 384 Pfam PF00155 Aminotransferase class I and II 29 377 6.7E-61 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_04345 bf5b041be9b5aa458204c7c99bd96746 384 Gene3D G3DSA:3.90.1150.10 17 380 9.7E-128 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_04345 bf5b041be9b5aa458204c7c99bd96746 384 Gene3D G3DSA:3.40.640.10 41 280 9.7E-128 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_13040 04a99c58af4469ab6414391b6b97d9fa 407 Gene3D G3DSA:1.10.540.10 25 132 4.2E-24 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_13040 04a99c58af4469ab6414391b6b97d9fa 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 130 1.1E-10 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_13040 04a99c58af4469ab6414391b6b97d9fa 407 PIRSF PIRSF016578 6 397 4.5E-37 T 11-10-2018 AYJ52_13040 04a99c58af4469ab6414391b6b97d9fa 407 Gene3D G3DSA:2.40.110.10 133 233 1.4E-26 T 11-10-2018 AYJ52_13040 04a99c58af4469ab6414391b6b97d9fa 407 Gene3D G3DSA:1.20.140.10 234 404 5.9E-47 T 11-10-2018 AYJ52_13040 04a99c58af4469ab6414391b6b97d9fa 407 SUPERFAMILY SSF47203 238 402 1.45E-18 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_13040 04a99c58af4469ab6414391b6b97d9fa 407 SUPERFAMILY SSF56645 30 232 2.09E-40 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_13040 04a99c58af4469ab6414391b6b97d9fa 407 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 18 406 3.2E-180 T 11-10-2018 IPR023922 Sulphate-starvation-induced SfnB AYJ52_13040 04a99c58af4469ab6414391b6b97d9fa 407 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 250 384 1.1E-18 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_19325 9634f48229ace63e005643940f366fe5 750 Pfam PF01131 DNA topoisomerase 131 544 2.1E-88 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 Pfam PF01751 Toprim domain 6 116 6.0E-22 T 11-10-2018 IPR006171 TOPRIM domain AYJ52_19325 9634f48229ace63e005643940f366fe5 750 Gene3D G3DSA:3.40.50.140 1 137 4.6E-41 T 11-10-2018 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 Gene3D G3DSA:2.70.20.10 187 455 3.0E-99 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 Gene3D G3DSA:1.10.460.10 139 551 3.0E-99 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 SUPERFAMILY SSF56712 5 581 8.63E-130 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AYJ52_19325 9634f48229ace63e005643940f366fe5 750 Gene3D G3DSA:1.10.290.10 249 368 3.0E-99 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 SMART SM00493 4 107 9.8E-18 T 11-10-2018 IPR006171 TOPRIM domain AYJ52_19325 9634f48229ace63e005643940f366fe5 750 SMART SM00436 107 195 6.4E-16 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 354 370 9.3E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 81 94 9.3E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 165 183 9.3E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 472 486 9.3E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 283 292 9.3E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AYJ52_19325 9634f48229ace63e005643940f366fe5 750 SMART SM00437 241 510 4.7E-71 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AYJ52_19570 02bd9c4916599d417b36b8a53d12e06a 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 237 7.7E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_19570 02bd9c4916599d417b36b8a53d12e06a 243 SUPERFAMILY SSF46894 134 237 3.97E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_19570 02bd9c4916599d417b36b8a53d12e06a 243 SMART SM00448 13 123 3.6E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_19570 02bd9c4916599d417b36b8a53d12e06a 243 SUPERFAMILY SSF52172 9 138 2.42E-41 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_19570 02bd9c4916599d417b36b8a53d12e06a 243 Pfam PF00072 Response regulator receiver domain 15 123 2.2E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_19570 02bd9c4916599d417b36b8a53d12e06a 243 SMART SM00862 163 237 5.0E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_19570 02bd9c4916599d417b36b8a53d12e06a 243 Gene3D G3DSA:1.10.10.10 141 243 1.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_19570 02bd9c4916599d417b36b8a53d12e06a 243 Gene3D G3DSA:3.40.50.2300 7 140 3.1E-38 T 11-10-2018 AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 SMART SM00388 137 201 2.1E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 361 2.5E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 2.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 2.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 310 2.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 Gene3D G3DSA:1.10.287.130 140 197 5.3E-14 T 11-10-2018 AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 85 6.6E-6 T 11-10-2018 IPR000014 PAS domain AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 SMART SM00091 7 75 1.1E-5 T 11-10-2018 IPR000014 PAS domain AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 SMART SM00387 241 364 5.3E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 SUPERFAMILY SSF55874 203 362 8.38E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 SUPERFAMILY SSF47384 129 196 1.84E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 Gene3D G3DSA:3.30.450.20 9 120 5.0E-16 T 11-10-2018 AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 194 5.4E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 SUPERFAMILY SSF55785 9 99 4.0E-9 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 Pfam PF00989 PAS fold 8 98 7.1E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 AYJ52_15710 24fa704ef05946dcc9911829ba92697b 369 Gene3D G3DSA:3.30.565.10 200 362 5.9E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_00080 deece03571a8b6143dcc1e1a4618f038 338 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 81 291 1.0E-47 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AYJ52_00080 deece03571a8b6143dcc1e1a4618f038 338 Gene3D G3DSA:3.90.226.10 82 288 9.1E-64 T 11-10-2018 AYJ52_00080 deece03571a8b6143dcc1e1a4618f038 338 SUPERFAMILY SSF52096 74 280 4.29E-40 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_00080 deece03571a8b6143dcc1e1a4618f038 338 Gene3D G3DSA:3.40.1750.20 186 252 9.1E-64 T 11-10-2018 AYJ52_00080 deece03571a8b6143dcc1e1a4618f038 338 Pfam PF01343 Peptidase family S49 147 297 2.7E-37 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AYJ52_14785 91a0d4c259e71ce359c41d1a7ca6cbb1 310 Gene3D G3DSA:1.10.10.10 7 94 4.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14785 91a0d4c259e71ce359c41d1a7ca6cbb1 310 SUPERFAMILY SSF53850 95 306 4.34E-36 T 11-10-2018 AYJ52_14785 91a0d4c259e71ce359c41d1a7ca6cbb1 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.9E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14785 91a0d4c259e71ce359c41d1a7ca6cbb1 310 Gene3D G3DSA:3.40.190.10 168 273 1.2E-57 T 11-10-2018 AYJ52_14785 91a0d4c259e71ce359c41d1a7ca6cbb1 310 Gene3D G3DSA:3.40.190.10 96 299 1.2E-57 T 11-10-2018 AYJ52_14785 91a0d4c259e71ce359c41d1a7ca6cbb1 310 Pfam PF03466 LysR substrate binding domain 95 299 5.6E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14785 91a0d4c259e71ce359c41d1a7ca6cbb1 310 SUPERFAMILY SSF46785 7 90 9.48E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_02405 cfbfe9c0a35be567def6c61a223c7c3d 220 Gene3D G3DSA:3.90.730.10 29 219 4.3E-10 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AYJ52_02405 cfbfe9c0a35be567def6c61a223c7c3d 220 SUPERFAMILY SSF55895 37 216 9.42E-17 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AYJ52_02405 cfbfe9c0a35be567def6c61a223c7c3d 220 Pfam PF00445 Ribonuclease T2 family 42 197 1.4E-5 T 11-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 Gene3D G3DSA:3.30.457.10 39 117 4.4E-20 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 Pfam PF02727 Copper amine oxidase, N2 domain 127 211 2.7E-12 T 11-10-2018 IPR015800 Copper amine oxidase, N2-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751|Reactome: R-HSA-211945 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 SUPERFAMILY SSF55383 40 118 4.84E-8 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 Gene3D G3DSA:3.10.450.40 220 325 2.0E-29 T 11-10-2018 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 ProSitePatterns PS01165 Copper amine oxidase copper-binding site signature. 718 731 - T 11-10-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 489 502 - T 11-10-2018 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 Gene3D G3DSA:3.10.450.40 119 219 1.1E-32 T 11-10-2018 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 SUPERFAMILY SSF49998 335 756 2.35E-139 T 11-10-2018 IPR036460 Copper amine oxidase, catalytic domain superfamily GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 Pfam PF07833 Copper amine oxidase N-terminal domain 40 113 2.1E-5 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 SUPERFAMILY SSF54416 219 329 5.23E-26 T 11-10-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 Pfam PF01179 Copper amine oxidase, enzyme domain 339 756 1.8E-126 T 11-10-2018 IPR015798 Copper amine oxidase, catalytic domain GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 Pfam PF02728 Copper amine oxidase, N3 domain 219 320 8.6E-22 T 11-10-2018 IPR015802 Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751|Reactome: R-HSA-211945 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 SUPERFAMILY SSF54416 126 215 1.31E-17 T 11-10-2018 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AYJ52_15035 721f83719c4be7c8919fb2a3e089f81d 768 Gene3D G3DSA:2.70.98.20 347 756 9.7E-156 T 11-10-2018 IPR036460 Copper amine oxidase, catalytic domain superfamily GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 Reactome: R-HSA-211945 AYJ52_16255 591a3d0bca37d5c602fd8e313b522737 227 SMART SM00702 2 177 5.2E-23 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AYJ52_16255 591a3d0bca37d5c602fd8e313b522737 227 SUPERFAMILY SSF51197 4 179 1.37E-8 T 11-10-2018 AYJ52_16255 591a3d0bca37d5c602fd8e313b522737 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 2.7E-13 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AYJ52_16255 591a3d0bca37d5c602fd8e313b522737 227 Gene3D G3DSA:2.60.120.620 1 178 1.1E-42 T 11-10-2018 AYJ52_16255 591a3d0bca37d5c602fd8e313b522737 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 45.523 T 11-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 AYJ52_16255 591a3d0bca37d5c602fd8e313b522737 227 Gene3D G3DSA:4.10.860.20 180 227 7.3E-21 T 11-10-2018 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 TIGRFAM TIGR00492 alr: alanine racemase 47 393 2.7E-67 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 Pfam PF00842 Alanine racemase, C-terminal domain 283 407 1.0E-33 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 SUPERFAMILY SSF51419 51 282 1.31E-43 T 11-10-2018 IPR029066 PLP-binding barrel AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 PRINTS PR00992 Alanine racemase signature 247 274 2.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 PRINTS PR00992 Alanine racemase signature 315 330 2.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 PRINTS PR00992 Alanine racemase signature 70 86 2.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 PRINTS PR00992 Alanine racemase signature 106 124 2.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 PRINTS PR00992 Alanine racemase signature 204 215 2.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 PRINTS PR00992 Alanine racemase signature 336 353 2.2E-33 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 Gene3D G3DSA:2.40.37.10 47 406 9.0E-129 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 Pfam PF01168 Alanine racemase, N-terminal domain 51 273 4.4E-44 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 SMART SM01005 282 410 1.7E-45 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 Hamap MF_01201 Alanine racemase. 44 410 24.686 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 SUPERFAMILY SSF50621 275 409 2.02E-40 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AYJ52_12265 a085f6e50d8b3c22ed796452ce3b5954 430 Gene3D G3DSA:3.20.20.10 53 270 9.0E-129 T 11-10-2018 IPR029066 PLP-binding barrel AYJ52_15250 1ce2171fff6c1b6869132f49024ee8f0 730 Gene3D G3DSA:2.40.170.20 180 730 6.3E-142 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_15250 1ce2171fff6c1b6869132f49024ee8f0 730 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 713 730 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AYJ52_15250 1ce2171fff6c1b6869132f49024ee8f0 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 168 8.4E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_15250 1ce2171fff6c1b6869132f49024ee8f0 730 SUPERFAMILY SSF56935 35 730 1.1E-109 T 11-10-2018 AYJ52_15250 1ce2171fff6c1b6869132f49024ee8f0 730 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 730 1.8E-94 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_15250 1ce2171fff6c1b6869132f49024ee8f0 730 Pfam PF00593 TonB dependent receptor 276 729 3.2E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_15250 1ce2171fff6c1b6869132f49024ee8f0 730 Gene3D G3DSA:2.170.130.10 50 177 1.3E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_14550 e50cae4a69759e5290682175ea4618e2 528 Pfam PF03321 GH3 auxin-responsive promoter 26 517 9.8E-80 T 11-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 AYJ52_15125 df3095cd1c452ab447114d98a9021f5f 306 Pfam PF03466 LysR substrate binding domain 109 293 2.5E-8 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_15125 df3095cd1c452ab447114d98a9021f5f 306 Gene3D G3DSA:3.40.190.10 102 300 4.0E-31 T 11-10-2018 AYJ52_15125 df3095cd1c452ab447114d98a9021f5f 306 Gene3D G3DSA:3.40.190.10 182 276 4.0E-31 T 11-10-2018 AYJ52_15125 df3095cd1c452ab447114d98a9021f5f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_15125 df3095cd1c452ab447114d98a9021f5f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_15125 df3095cd1c452ab447114d98a9021f5f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_15125 df3095cd1c452ab447114d98a9021f5f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 79 3.0E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_15125 df3095cd1c452ab447114d98a9021f5f 306 SUPERFAMILY SSF53850 109 304 1.99E-22 T 11-10-2018 AYJ52_15125 df3095cd1c452ab447114d98a9021f5f 306 Gene3D G3DSA:1.10.10.10 12 100 8.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15125 df3095cd1c452ab447114d98a9021f5f 306 SUPERFAMILY SSF46785 15 97 7.26E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_05195 0d03321f01d58144ceb258887ad0c848 451 Pfam PF00583 Acetyltransferase (GNAT) family 330 410 4.3E-12 T 11-10-2018 IPR000182 GNAT domain AYJ52_05195 0d03321f01d58144ceb258887ad0c848 451 Gene3D G3DSA:3.40.1160.10 14 297 2.9E-90 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AYJ52_05195 0d03321f01d58144ceb258887ad0c848 451 SUPERFAMILY SSF53633 11 297 1.95E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AYJ52_05195 0d03321f01d58144ceb258887ad0c848 451 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 450 206.54 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AYJ52_05195 0d03321f01d58144ceb258887ad0c848 451 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 16 449 4.9E-179 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AYJ52_05195 0d03321f01d58144ceb258887ad0c848 451 Pfam PF00696 Amino acid kinase family 33 247 5.9E-23 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AYJ52_05195 0d03321f01d58144ceb258887ad0c848 451 Gene3D G3DSA:3.40.630.30 298 450 7.2E-40 T 11-10-2018 AYJ52_05195 0d03321f01d58144ceb258887ad0c848 451 PIRSF PIRSF000423 6 450 3.6E-193 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AYJ52_05195 0d03321f01d58144ceb258887ad0c848 451 SUPERFAMILY SSF55729 279 425 1.5E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_01605 b0973639a42d6cf5ca78ba4eb51262df 188 Gene3D G3DSA:3.10.300.10 1 188 2.4E-57 T 11-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AYJ52_01605 b0973639a42d6cf5ca78ba4eb51262df 188 SUPERFAMILY SSF50486 4 188 1.02E-57 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AYJ52_01605 b0973639a42d6cf5ca78ba4eb51262df 188 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 6 187 1.6E-49 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AYJ52_01605 b0973639a42d6cf5ca78ba4eb51262df 188 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 7 187 27.277 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AYJ52_01605 b0973639a42d6cf5ca78ba4eb51262df 188 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 9 184 3.2E-52 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AYJ52_17425 daca1363a640d4e584d1290b6974ac98 259 Gene3D G3DSA:3.40.50.80 100 255 2.5E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_17425 daca1363a640d4e584d1290b6974ac98 259 Pfam PF00970 Oxidoreductase FAD-binding domain 15 99 3.9E-10 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AYJ52_17425 daca1363a640d4e584d1290b6974ac98 259 SUPERFAMILY SSF52343 102 257 8.51E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_17425 daca1363a640d4e584d1290b6974ac98 259 SUPERFAMILY SSF63380 7 99 4.48E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_17425 daca1363a640d4e584d1290b6974ac98 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 216 224 7.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_17425 daca1363a640d4e584d1290b6974ac98 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 7.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_17425 daca1363a640d4e584d1290b6974ac98 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 7.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AYJ52_17425 daca1363a640d4e584d1290b6974ac98 259 Pfam PF00175 Oxidoreductase NAD-binding domain 112 230 4.5E-8 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_17425 daca1363a640d4e584d1290b6974ac98 259 Gene3D G3DSA:2.40.30.10 1 96 8.9E-29 T 11-10-2018 AYJ52_13460 706995a1fcb6c23ba3a55e28f50c1b6c 113 Gene3D G3DSA:2.40.10.220 2 113 3.2E-33 T 11-10-2018 AYJ52_13460 706995a1fcb6c23ba3a55e28f50c1b6c 113 Pfam PF07238 PilZ domain 11 75 1.2E-5 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AYJ52_09555 0c13d53dea440861e0cd2e674207bfe7 277 SUPERFAMILY SSF55060 156 257 5.28E-21 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AYJ52_09555 0c13d53dea440861e0cd2e674207bfe7 277 SUPERFAMILY SSF54211 1 154 1.29E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_09555 0c13d53dea440861e0cd2e674207bfe7 277 Pfam PF00288 GHMP kinases N terminal domain 83 141 4.7E-12 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AYJ52_09555 0c13d53dea440861e0cd2e674207bfe7 277 Gene3D G3DSA:3.30.70.890 158 275 4.4E-20 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AYJ52_09555 0c13d53dea440861e0cd2e674207bfe7 277 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 262 30.066 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AYJ52_09555 0c13d53dea440861e0cd2e674207bfe7 277 Pfam PF08544 GHMP kinases C terminal 204 251 1.3E-5 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AYJ52_09555 0c13d53dea440861e0cd2e674207bfe7 277 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 256 2.8E-74 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AYJ52_09555 0c13d53dea440861e0cd2e674207bfe7 277 PIRSF PIRSF010376 1 271 3.8E-77 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AYJ52_09555 0c13d53dea440861e0cd2e674207bfe7 277 Gene3D G3DSA:3.30.230.10 1 155 2.0E-57 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_15480 f846d6c352bf06ad0b582895f984f877 402 PIRSF PIRSF000521 15 163 5.1E-11 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_15480 f846d6c352bf06ad0b582895f984f877 402 PIRSF PIRSF000521 171 401 8.2E-33 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_15480 f846d6c352bf06ad0b582895f984f877 402 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 398 2.8E-129 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AYJ52_15480 f846d6c352bf06ad0b582895f984f877 402 Gene3D G3DSA:3.40.640.10 60 308 1.7E-124 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_15480 f846d6c352bf06ad0b582895f984f877 402 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 16 401 67.821 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AYJ52_15480 f846d6c352bf06ad0b582895f984f877 402 Pfam PF00202 Aminotransferase class-III 26 397 2.2E-101 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_15480 f846d6c352bf06ad0b582895f984f877 402 SUPERFAMILY SSF53383 14 399 2.88E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_15480 f846d6c352bf06ad0b582895f984f877 402 Gene3D G3DSA:3.90.1150.10 26 391 1.7E-124 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_15480 f846d6c352bf06ad0b582895f984f877 402 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 226 263 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_10715 6e3132f5e039338103938019f2c75eff 530 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_10715 6e3132f5e039338103938019f2c75eff 530 Pfam PF00005 ABC transporter 32 188 1.0E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_10715 6e3132f5e039338103938019f2c75eff 530 SUPERFAMILY SSF52540 16 259 1.66E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_10715 6e3132f5e039338103938019f2c75eff 530 SMART SM00382 41 237 2.3E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_10715 6e3132f5e039338103938019f2c75eff 530 SMART SM00382 313 502 1.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_10715 6e3132f5e039338103938019f2c75eff 530 Pfam PF00005 ABC transporter 305 454 1.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_10715 6e3132f5e039338103938019f2c75eff 530 Gene3D G3DSA:3.40.50.300 276 529 3.2E-78 T 11-10-2018 AYJ52_10715 6e3132f5e039338103938019f2c75eff 530 Gene3D G3DSA:3.40.50.300 13 275 1.0E-71 T 11-10-2018 AYJ52_10715 6e3132f5e039338103938019f2c75eff 530 SUPERFAMILY SSF52540 278 525 4.15E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_10715 6e3132f5e039338103938019f2c75eff 530 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 SUPERFAMILY SSF53155 115 193 1.08E-14 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 Pfam PF12833 Helix-turn-helix domain 33 109 1.2E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 SMART SM00342 26 108 2.0E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 Gene3D G3DSA:1.10.10.10 195 280 1.1E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 197 275 3.1E-27 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 SUPERFAMILY SSF46767 195 275 2.35E-28 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 246 252 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 SUPERFAMILY SSF46689 11 60 2.96E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 Gene3D G3DSA:3.30.160.70 107 194 2.0E-17 T 11-10-2018 AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 196 275 2.6E-30 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AYJ52_06785 cd3e30fb4e495c5527ef85d8ab07a8d1 284 Gene3D G3DSA:1.10.10.60 10 106 9.5E-18 T 11-10-2018 AYJ52_04905 0fc33855423aa26b7f9686f00bf87a17 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 5.6E-83 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AYJ52_04905 0fc33855423aa26b7f9686f00bf87a17 360 Gene3D G3DSA:3.40.50.300 6 329 2.0E-75 T 11-10-2018 AYJ52_04905 0fc33855423aa26b7f9686f00bf87a17 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 337 9.9E-25 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AYJ52_04905 0fc33855423aa26b7f9686f00bf87a17 360 Gene3D G3DSA:1.20.1050.90 116 294 2.0E-75 T 11-10-2018 AYJ52_04905 0fc33855423aa26b7f9686f00bf87a17 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 78.192 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AYJ52_04905 0fc33855423aa26b7f9686f00bf87a17 360 SUPERFAMILY SSF52540 1 334 1.39E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18700 7fac1d5c7175cedee4ee5fd1eea3563e 249 Gene3D G3DSA:2.40.160.170 22 249 1.1E-84 T 11-10-2018 AYJ52_18700 7fac1d5c7175cedee4ee5fd1eea3563e 249 SUPERFAMILY SSF56925 47 201 6.8E-8 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 SUPERFAMILY SSF51735 6 248 3.48E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 Gene3D G3DSA:3.40.50.720 1 254 2.8E-67 T 11-10-2018 AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 245 1.7E-57 T 11-10-2018 AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 9.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 9.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 9.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 9.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.7E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 6.4E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.4E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14205 b61f0d27aa4acd7addaef8cce3520966 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 6.4E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_17850 e58198a09d5c575519e8df27277fabee 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_17850 e58198a09d5c575519e8df27277fabee 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 526 1.3E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_17850 e58198a09d5c575519e8df27277fabee 542 Gene3D G3DSA:3.40.50.12780 1 437 4.4E-161 T 11-10-2018 AYJ52_17850 e58198a09d5c575519e8df27277fabee 542 Gene3D G3DSA:3.30.300.310 438 541 8.7E-27 T 11-10-2018 AYJ52_17850 e58198a09d5c575519e8df27277fabee 542 SUPERFAMILY SSF56801 11 536 2.49E-123 T 11-10-2018 AYJ52_17850 e58198a09d5c575519e8df27277fabee 542 Pfam PF00501 AMP-binding enzyme 38 442 9.4E-76 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_17850 e58198a09d5c575519e8df27277fabee 542 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 6 533 1.8E-249 T 11-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 AYJ52_05055 59a79956e21ec08e4155dac2edd957e2 184 SUPERFAMILY SSF51064 138 183 1.28E-10 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AYJ52_05055 59a79956e21ec08e4155dac2edd957e2 184 Gene3D G3DSA:2.30.22.10 131 184 1.8E-14 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AYJ52_05055 59a79956e21ec08e4155dac2edd957e2 184 Gene3D G3DSA:3.90.20.20 27 130 4.1E-16 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AYJ52_05055 59a79956e21ec08e4155dac2edd957e2 184 Pfam PF01025 GrpE 28 183 5.9E-35 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AYJ52_05055 59a79956e21ec08e4155dac2edd957e2 184 ProSitePatterns PS01071 grpE protein signature. 141 182 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AYJ52_05055 59a79956e21ec08e4155dac2edd957e2 184 Hamap MF_01151 Protein GrpE [grpE]. 3 184 16.04 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AYJ52_05055 59a79956e21ec08e4155dac2edd957e2 184 PRINTS PR00773 GrpE protein signature 138 153 2.4E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AYJ52_05055 59a79956e21ec08e4155dac2edd957e2 184 PRINTS PR00773 GrpE protein signature 87 102 2.4E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AYJ52_05055 59a79956e21ec08e4155dac2edd957e2 184 PRINTS PR00773 GrpE protein signature 163 182 2.4E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AYJ52_05055 59a79956e21ec08e4155dac2edd957e2 184 SUPERFAMILY SSF58014 36 131 7.72E-18 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AYJ52_03300 d97969945dfc27f94aa5fd1c44c11ada 610 SUPERFAMILY SSF56519 68 262 1.96E-38 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AYJ52_03300 d97969945dfc27f94aa5fd1c44c11ada 610 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 24 602 40.875 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AYJ52_03300 d97969945dfc27f94aa5fd1c44c11ada 610 SUPERFAMILY SSF56601 214 602 2.9E-91 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_03300 d97969945dfc27f94aa5fd1c44c11ada 610 Pfam PF03717 Penicillin-binding Protein dimerisation domain 72 247 2.7E-17 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AYJ52_03300 d97969945dfc27f94aa5fd1c44c11ada 610 Gene3D G3DSA:3.40.710.10 325 507 3.3E-124 T 11-10-2018 AYJ52_03300 d97969945dfc27f94aa5fd1c44c11ada 610 Gene3D G3DSA:3.90.1310.10 58 153 8.7E-11 T 11-10-2018 AYJ52_03300 d97969945dfc27f94aa5fd1c44c11ada 610 Gene3D G3DSA:3.90.1310.10 154 263 4.2E-31 T 11-10-2018 AYJ52_03300 d97969945dfc27f94aa5fd1c44c11ada 610 Gene3D G3DSA:3.30.450.330 264 591 3.3E-124 T 11-10-2018 AYJ52_03300 d97969945dfc27f94aa5fd1c44c11ada 610 Pfam PF00905 Penicillin binding protein transpeptidase domain 289 587 1.6E-72 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AYJ52_11875 35717eb71521281decb6717a9974d7b6 342 Pfam PF13411 MerR HTH family regulatory protein 4 70 1.0E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11875 35717eb71521281decb6717a9974d7b6 342 SUPERFAMILY SSF46955 3 106 5.13E-28 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_11875 35717eb71521281decb6717a9974d7b6 342 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.5E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11875 35717eb71521281decb6717a9974d7b6 342 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.5E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11875 35717eb71521281decb6717a9974d7b6 342 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.5E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11875 35717eb71521281decb6717a9974d7b6 342 SMART SM00422 3 72 4.5E-30 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11875 35717eb71521281decb6717a9974d7b6 342 Pfam PF07739 TipAS antibiotic-recognition domain 149 229 8.4E-9 T 11-10-2018 IPR012925 TipAS antibiotic-recognition domain AYJ52_11875 35717eb71521281decb6717a9974d7b6 342 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_06505 a1b00c636c5b473c5d1225172289baef 240 PIRSF PIRSF003107 9 230 5.6E-64 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AYJ52_06505 a1b00c636c5b473c5d1225172289baef 240 Gene3D G3DSA:1.20.58.220 122 234 2.8E-32 T 11-10-2018 IPR038078 PhoU-like domain superfamily AYJ52_06505 a1b00c636c5b473c5d1225172289baef 240 SUPERFAMILY SSF109755 14 234 3.56E-64 T 11-10-2018 AYJ52_06505 a1b00c636c5b473c5d1225172289baef 240 Pfam PF01895 PhoU domain 29 114 3.5E-16 T 11-10-2018 IPR026022 PhoU domain AYJ52_06505 a1b00c636c5b473c5d1225172289baef 240 Pfam PF01895 PhoU domain 132 216 5.2E-16 T 11-10-2018 IPR026022 PhoU domain AYJ52_06505 a1b00c636c5b473c5d1225172289baef 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 222 2.7E-64 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AYJ52_06505 a1b00c636c5b473c5d1225172289baef 240 Gene3D G3DSA:1.20.58.220 4 121 2.8E-38 T 11-10-2018 IPR038078 PhoU-like domain superfamily AYJ52_07000 225b3de10ca64be5e5c433ad837679e1 1211 Gene3D G3DSA:3.40.50.300 396 878 6.8E-112 T 11-10-2018 AYJ52_07000 225b3de10ca64be5e5c433ad837679e1 1211 Gene3D G3DSA:3.40.50.10930 2 106 4.3E-11 T 11-10-2018 AYJ52_07000 225b3de10ca64be5e5c433ad837679e1 1211 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 3 877 3.9E-188 T 11-10-2018 AYJ52_07000 225b3de10ca64be5e5c433ad837679e1 1211 Gene3D G3DSA:3.40.50.10930 211 388 4.6E-33 T 11-10-2018 AYJ52_07000 225b3de10ca64be5e5c433ad837679e1 1211 SUPERFAMILY SSF52540 416 886 5.99E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07000 225b3de10ca64be5e5c433ad837679e1 1211 SUPERFAMILY SSF52540 3 407 3.58E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07000 225b3de10ca64be5e5c433ad837679e1 1211 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 2 1211 14.164 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AYJ52_07000 225b3de10ca64be5e5c433ad837679e1 1211 PIRSF PIRSF000980 2 1198 6.6E-153 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AYJ52_07000 225b3de10ca64be5e5c433ad837679e1 1211 SUPERFAMILY SSF52980 897 1208 2.04E-45 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AYJ52_07000 225b3de10ca64be5e5c433ad837679e1 1211 Gene3D G3DSA:1.10.486.10 510 730 6.8E-112 T 11-10-2018 AYJ52_03435 279db8645d41c11e8eaf398def2102b4 111 Pfam PF12823 Domain of unknown function (DUF3817) 14 93 1.9E-16 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane AYJ52_03435 279db8645d41c11e8eaf398def2102b4 111 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 16 92 3.4E-20 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 Gene3D G3DSA:3.30.540.10 2 187 3.4E-67 T 11-10-2018 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 Gene3D G3DSA:3.40.190.80 188 323 5.2E-50 T 11-10-2018 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 11 186 3.8E-60 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 63 89 3.6E-68 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 197 224 3.6E-68 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 26 53 3.6E-68 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 140 163 3.6E-68 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 299 323 3.6E-68 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 171 194 3.6E-68 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 SUPERFAMILY SSF56655 4 323 9.73E-110 T 11-10-2018 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 PIRSF PIRSF500210 1 323 1.2E-121 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 PIRSF PIRSF000904 1 323 3.4E-120 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AYJ52_00010 198d38e13e9cc158d593ffff8b8d400b 323 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 323 44.58 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AYJ52_03865 2638bcc88aa4a7c2dad7ed97a1e96d9f 499 SMART SM00345 25 84 7.4E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_03865 2638bcc88aa4a7c2dad7ed97a1e96d9f 499 Gene3D G3DSA:3.40.640.10 119 483 6.6E-113 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_03865 2638bcc88aa4a7c2dad7ed97a1e96d9f 499 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 1.6E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_03865 2638bcc88aa4a7c2dad7ed97a1e96d9f 499 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 8.3E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_03865 2638bcc88aa4a7c2dad7ed97a1e96d9f 499 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 8.3E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_03865 2638bcc88aa4a7c2dad7ed97a1e96d9f 499 SUPERFAMILY SSF53383 128 492 1.35E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_03865 2638bcc88aa4a7c2dad7ed97a1e96d9f 499 Gene3D G3DSA:1.10.10.10 10 90 3.7E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_03865 2638bcc88aa4a7c2dad7ed97a1e96d9f 499 SUPERFAMILY SSF46785 17 86 2.36E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_03865 2638bcc88aa4a7c2dad7ed97a1e96d9f 499 Pfam PF00155 Aminotransferase class I and II 163 458 2.0E-26 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_16730 ade6821beec7ebc97742dbad425b6c42 127 Gene3D G3DSA:3.30.70.60 1 92 1.8E-29 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AYJ52_16730 ade6821beec7ebc97742dbad425b6c42 127 SUPERFAMILY SSF54995 1 101 1.01E-35 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16730 ade6821beec7ebc97742dbad425b6c42 127 Pfam PF01250 Ribosomal protein S6 3 91 7.3E-25 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16730 ade6821beec7ebc97742dbad425b6c42 127 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 20.578 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AYJ52_16730 ade6821beec7ebc97742dbad425b6c42 127 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 11-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 AYJ52_16730 ade6821beec7ebc97742dbad425b6c42 127 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 5.1E-33 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 SUPERFAMILY SSF51419 9 238 1.74E-58 T 11-10-2018 IPR029066 PLP-binding barrel AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 Pfam PF00842 Alanine racemase, C-terminal domain 238 362 1.2E-37 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 TIGRFAM TIGR00492 alr: alanine racemase 3 362 5.4E-104 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 Gene3D G3DSA:2.40.37.10 9 361 2.0E-107 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 SMART SM01005 237 366 6.2E-58 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 Pfam PF01168 Alanine racemase, N-terminal domain 9 222 2.6E-61 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 PRINTS PR00992 Alanine racemase signature 270 285 5.6E-56 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 PRINTS PR00992 Alanine racemase signature 121 133 5.6E-56 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 PRINTS PR00992 Alanine racemase signature 291 308 5.6E-56 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 PRINTS PR00992 Alanine racemase signature 195 222 5.6E-56 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 PRINTS PR00992 Alanine racemase signature 155 166 5.6E-56 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 PRINTS PR00992 Alanine racemase signature 27 43 5.6E-56 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 PRINTS PR00992 Alanine racemase signature 61 79 5.6E-56 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 PRINTS PR00992 Alanine racemase signature 253 268 5.6E-56 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 PRINTS PR00992 Alanine racemase signature 348 361 5.6E-56 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 Hamap MF_01201 Alanine racemase. 2 366 30.985 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 SUPERFAMILY SSF50621 231 362 2.02E-41 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AYJ52_05575 c1345bee2cc3506f6bf0c5688fa5c8c4 367 Gene3D G3DSA:3.20.20.10 11 220 2.0E-107 T 11-10-2018 IPR029066 PLP-binding barrel AYJ52_03235 cf8c46ebc0f1f4dc5f5a76802c1b01ee 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 68.847 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AYJ52_03235 cf8c46ebc0f1f4dc5f5a76802c1b01ee 360 SUPERFAMILY SSF56796 3 354 5.63E-111 T 11-10-2018 AYJ52_03235 cf8c46ebc0f1f4dc5f5a76802c1b01ee 360 Gene3D G3DSA:3.40.50.1970 1 171 2.3E-66 T 11-10-2018 AYJ52_03235 cf8c46ebc0f1f4dc5f5a76802c1b01ee 360 Pfam PF01761 3-dehydroquinate synthase 66 323 1.2E-105 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AYJ52_03235 cf8c46ebc0f1f4dc5f5a76802c1b01ee 360 Gene3D G3DSA:1.20.1090.10 172 360 4.7E-73 T 11-10-2018 AYJ52_03235 cf8c46ebc0f1f4dc5f5a76802c1b01ee 360 PIRSF PIRSF001455 6 359 3.7E-103 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AYJ52_03235 cf8c46ebc0f1f4dc5f5a76802c1b01ee 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 16 352 2.3E-113 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AYJ52_17085 18a5e5f1286becbb9d16c674cc7e64e4 277 SUPERFAMILY SSF51735 11 240 6.31E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_17085 18a5e5f1286becbb9d16c674cc7e64e4 277 Pfam PF00106 short chain dehydrogenase 10 201 1.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_17085 18a5e5f1286becbb9d16c674cc7e64e4 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 9.9E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_17085 18a5e5f1286becbb9d16c674cc7e64e4 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 9.9E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_17085 18a5e5f1286becbb9d16c674cc7e64e4 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 9.9E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_17085 18a5e5f1286becbb9d16c674cc7e64e4 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 9.9E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_17085 18a5e5f1286becbb9d16c674cc7e64e4 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 9.9E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_17085 18a5e5f1286becbb9d16c674cc7e64e4 277 Gene3D G3DSA:3.40.50.720 7 238 1.4E-44 T 11-10-2018 AYJ52_06915 9d231b1f24eb10de0e7731d8f2fc4ed8 134 Pfam PF03334 Na+/H+ antiporter subunit 12 91 6.7E-25 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 AYJ52_06915 9d231b1f24eb10de0e7731d8f2fc4ed8 134 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 96 2.8E-25 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 AYJ52_04655 e8032a297e14968ca442cbdb9c51357b 421 Gene3D G3DSA:1.20.272.10 224 328 2.3E-44 T 11-10-2018 AYJ52_04655 e8032a297e14968ca442cbdb9c51357b 421 Gene3D G3DSA:3.40.50.300 1 152 1.9E-43 T 11-10-2018 AYJ52_04655 e8032a297e14968ca442cbdb9c51357b 421 SUPERFAMILY SSF52540 4 219 1.45E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_04655 e8032a297e14968ca442cbdb9c51357b 421 Pfam PF12002 MgsA AAA+ ATPase C terminal 251 410 2.2E-66 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal AYJ52_04655 e8032a297e14968ca442cbdb9c51357b 421 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 45 147 2.3E-15 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_04655 e8032a297e14968ca442cbdb9c51357b 421 SUPERFAMILY SSF48019 236 418 1.47E-71 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AYJ52_04655 e8032a297e14968ca442cbdb9c51357b 421 Gene3D G3DSA:1.10.8.60 153 223 4.2E-7 T 11-10-2018 AYJ52_04655 e8032a297e14968ca442cbdb9c51357b 421 SMART SM00382 41 153 7.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_04655 e8032a297e14968ca442cbdb9c51357b 421 Gene3D G3DSA:1.10.3710.10 329 421 2.9E-30 T 11-10-2018 AYJ52_04655 e8032a297e14968ca442cbdb9c51357b 421 Pfam PF16193 AAA C-terminal domain 181 250 1.8E-22 T 11-10-2018 IPR032423 AAA C-terminal domain AYJ52_15535 07cda0b6ad2b66552d1e8518aced6d23 315 Gene3D G3DSA:3.40.1190.20 2 314 7.5E-87 T 11-10-2018 IPR029056 Ribokinase-like AYJ52_15535 07cda0b6ad2b66552d1e8518aced6d23 315 SUPERFAMILY SSF53613 5 291 2.03E-59 T 11-10-2018 IPR029056 Ribokinase-like AYJ52_15535 07cda0b6ad2b66552d1e8518aced6d23 315 Pfam PF00294 pfkB family carbohydrate kinase 12 291 4.3E-45 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AYJ52_15535 07cda0b6ad2b66552d1e8518aced6d23 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AYJ52_15535 07cda0b6ad2b66552d1e8518aced6d23 315 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 2.0E-98 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AYJ52_15535 07cda0b6ad2b66552d1e8518aced6d23 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AYJ52_15535 07cda0b6ad2b66552d1e8518aced6d23 315 PIRSF PIRSF000535 1 308 9.6E-85 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AYJ52_15535 07cda0b6ad2b66552d1e8518aced6d23 315 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 4 305 3.6E-100 T 11-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AYJ52_02545 f105b8399f1183bb96f4e3ed92aefa74 85 Gene3D G3DSA:1.10.150.250 3 84 6.2E-21 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AYJ52_02545 f105b8399f1183bb96f4e3ed92aefa74 85 SUPERFAMILY SSF109910 6 80 6.41E-19 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AYJ52_02545 f105b8399f1183bb96f4e3ed92aefa74 85 Pfam PF03937 Flavinator of succinate dehydrogenase 10 77 4.5E-18 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase AYJ52_12680 5a975eec3d9723059f7c6189a22ebdfe 197 Pfam PF13302 Acetyltransferase (GNAT) domain 14 153 1.1E-12 T 11-10-2018 IPR000182 GNAT domain AYJ52_12680 5a975eec3d9723059f7c6189a22ebdfe 197 Gene3D G3DSA:3.40.630.30 2 194 2.1E-42 T 11-10-2018 AYJ52_12680 5a975eec3d9723059f7c6189a22ebdfe 197 SUPERFAMILY SSF55729 5 179 1.99E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_07140 a3ae33d6e05236ff289c301f537ee60c 210 SUPERFAMILY SSF53335 16 160 6.41E-9 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_07140 a3ae33d6e05236ff289c301f537ee60c 210 Pfam PF02390 Putative methyltransferase 23 175 2.7E-16 T 11-10-2018 AYJ52_07140 a3ae33d6e05236ff289c301f537ee60c 210 Gene3D G3DSA:3.40.50.150 2 194 1.7E-23 T 11-10-2018 AYJ52_02635 9a9a6eb5dab0a4d5f7d137afca631fa9 105 Pfam PF00467 KOW motif 6 34 4.4E-7 T 11-10-2018 IPR005824 KOW AYJ52_02635 9a9a6eb5dab0a4d5f7d137afca631fa9 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 1.1E-33 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02635 9a9a6eb5dab0a4d5f7d137afca631fa9 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02635 9a9a6eb5dab0a4d5f7d137afca631fa9 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 100 5.2E-21 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02635 9a9a6eb5dab0a4d5f7d137afca631fa9 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 95 19.332 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02635 9a9a6eb5dab0a4d5f7d137afca631fa9 105 Gene3D G3DSA:2.30.30.30 1 102 3.3E-34 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AYJ52_02635 9a9a6eb5dab0a4d5f7d137afca631fa9 105 SMART SM00739 3 30 1.7E-6 T 11-10-2018 IPR005824 KOW AYJ52_02635 9a9a6eb5dab0a4d5f7d137afca631fa9 105 SUPERFAMILY SSF50104 3 99 1.54E-29 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 ProSitePatterns PS00104 EPSP synthase signature 1. 393 407 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 Pfam PF02153 Prephenate dehydrogenase 22 278 8.0E-71 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 Gene3D G3DSA:3.40.50.720 6 183 3.6E-52 T 11-10-2018 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 318 739 9.1E-129 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 Gene3D G3DSA:1.10.3660.10 184 288 5.2E-35 T 11-10-2018 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 SUPERFAMILY SSF55205 309 741 7.85E-132 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 SUPERFAMILY SSF51735 8 176 1.07E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 Gene3D G3DSA:3.65.10.10 318 734 9.7E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 313 735 1.2E-117 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 Gene3D G3DSA:3.65.10.10 326 536 9.7E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 ProSitePatterns PS00885 EPSP synthase signature 2. 647 665 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 314 743 33.0 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AYJ52_17330 ed26544967fd9090177a7f6ed01a7bcc 748 SUPERFAMILY SSF48179 181 288 3.17E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 502 519 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 529 39.562 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 Gene3D G3DSA:1.10.1390.10 512 553 5.4E-15 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 Pfam PF00342 Phosphoglucose isomerase 55 547 1.7E-175 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 SUPERFAMILY SSF53697 22 552 1.14E-179 T 11-10-2018 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 270 283 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 Gene3D G3DSA:3.40.50.10490 101 296 6.9E-206 T 11-10-2018 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 488 502 2.6E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 266 284 2.6E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 470 488 2.6E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 502 515 2.6E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.6E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 PRINTS PR00662 Glucose-6-phosphate isomerase signature 343 364 2.6E-51 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_05365 a17dcd491a97dcc37c860845a4b32fae 556 Gene3D G3DSA:3.40.50.10490 19 511 6.9E-206 T 11-10-2018 AYJ52_02720 3c051156d9a501a4b61dd8c57468f719 145 Gene3D G3DSA:1.10.10.10 1 142 1.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_02720 3c051156d9a501a4b61dd8c57468f719 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 9.6E-25 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AYJ52_02720 3c051156d9a501a4b61dd8c57468f719 145 SUPERFAMILY SSF46785 2 130 7.44E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_02720 3c051156d9a501a4b61dd8c57468f719 145 Pfam PF02082 Transcriptional regulator 1 81 2.4E-18 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AYJ52_09380 9b5efe6722bc5ae6a0f60ed64b32c492 348 SUPERFAMILY SSF64383 208 342 1.96E-32 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AYJ52_09380 9b5efe6722bc5ae6a0f60ed64b32c492 348 Gene3D G3DSA:3.30.1400.10 206 346 8.0E-35 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AYJ52_09380 9b5efe6722bc5ae6a0f60ed64b32c492 348 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 209 336 7.5E-31 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AYJ52_09380 9b5efe6722bc5ae6a0f60ed64b32c492 348 SMART SM00771 207 338 6.4E-49 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AYJ52_09380 9b5efe6722bc5ae6a0f60ed64b32c492 348 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 223 346 7.0E-62 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AYJ52_06865 2e41adffd799eb44fe3cf1e2e529563e 570 SUPERFAMILY SSF52540 182 568 1.19E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_06865 2e41adffd799eb44fe3cf1e2e529563e 570 Pfam PF00437 Type II/IV secretion system protein 193 459 2.3E-90 T 11-10-2018 IPR001482 Type II/IV secretion system protein AYJ52_06865 2e41adffd799eb44fe3cf1e2e529563e 570 Gene3D G3DSA:3.30.450.90 156 292 7.4E-48 T 11-10-2018 AYJ52_06865 2e41adffd799eb44fe3cf1e2e529563e 570 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 14 569 3.1E-259 T 11-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 AYJ52_06865 2e41adffd799eb44fe3cf1e2e529563e 570 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 146 2.5E-12 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AYJ52_06865 2e41adffd799eb44fe3cf1e2e529563e 570 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 387 401 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AYJ52_06865 2e41adffd799eb44fe3cf1e2e529563e 570 Gene3D G3DSA:3.30.300.160 71 147 3.1E-5 T 11-10-2018 AYJ52_06865 2e41adffd799eb44fe3cf1e2e529563e 570 SUPERFAMILY SSF160246 6 146 4.18E-29 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AYJ52_06865 2e41adffd799eb44fe3cf1e2e529563e 570 Gene3D G3DSA:3.40.50.300 295 570 1.4E-104 T 11-10-2018 AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 Gene3D G3DSA:3.40.50.720 1 280 1.6E-71 T 11-10-2018 AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 Pfam PF00106 short chain dehydrogenase 7 200 1.4E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 8.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 SUPERFAMILY SSF51735 1 276 1.74E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_11070 fab9a9871c03bed7e4609f2ad195b567 284 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 0.009 T 11-10-2018 AYJ52_16450 43eb744ecca736af6993df82f8807250 102 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 2 90 1.8E-17 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ AYJ52_16450 43eb744ecca736af6993df82f8807250 102 Pfam PF04221 RelB antitoxin 5 71 5.1E-13 T 11-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ AYJ52_16450 43eb744ecca736af6993df82f8807250 102 Gene3D G3DSA:1.10.1220.10 2 51 2.4E-14 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AYJ52_12870 5628554543fdcca9428002630071a9d8 300 Gene3D G3DSA:1.10.10.10 2 91 2.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12870 5628554543fdcca9428002630071a9d8 300 SUPERFAMILY SSF53850 89 298 3.48E-34 T 11-10-2018 AYJ52_12870 5628554543fdcca9428002630071a9d8 300 Gene3D G3DSA:3.40.190.10 92 290 4.0E-57 T 11-10-2018 AYJ52_12870 5628554543fdcca9428002630071a9d8 300 Pfam PF03466 LysR substrate binding domain 87 294 9.1E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12870 5628554543fdcca9428002630071a9d8 300 SUPERFAMILY SSF46785 1 81 2.84E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12870 5628554543fdcca9428002630071a9d8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12870 5628554543fdcca9428002630071a9d8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12870 5628554543fdcca9428002630071a9d8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12870 5628554543fdcca9428002630071a9d8 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12870 5628554543fdcca9428002630071a9d8 300 Gene3D G3DSA:3.40.190.10 165 271 4.0E-57 T 11-10-2018 AYJ52_10925 d5a7cb62326b852c38aa1af7b2928bda 356 Pfam PF12833 Helix-turn-helix domain 275 351 3.9E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_10925 d5a7cb62326b852c38aa1af7b2928bda 356 Gene3D G3DSA:1.10.10.60 252 354 2.2E-22 T 11-10-2018 AYJ52_10925 d5a7cb62326b852c38aa1af7b2928bda 356 SMART SM00342 269 351 8.5E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_10925 d5a7cb62326b852c38aa1af7b2928bda 356 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 42 224 2.2E-31 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_10925 d5a7cb62326b852c38aa1af7b2928bda 356 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 335 351 2.4E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_10925 d5a7cb62326b852c38aa1af7b2928bda 356 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 335 2.4E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_10925 d5a7cb62326b852c38aa1af7b2928bda 356 SUPERFAMILY SSF46689 305 353 1.25E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_16365 16684b1babe0f2d85ae9a451c121452a 396 Gene3D G3DSA:1.25.40.10 286 392 2.4E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_16365 16684b1babe0f2d85ae9a451c121452a 396 SUPERFAMILY SSF46894 218 282 2.83E-5 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_16365 16684b1babe0f2d85ae9a451c121452a 396 SMART SM00862 226 291 0.0093 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_16365 16684b1babe0f2d85ae9a451c121452a 396 Gene3D G3DSA:3.30.450.40 23 205 8.7E-37 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_06790 99b78efb2e0f8c68ab3e68cff2035b90 203 SUPERFAMILY SSF51197 8 200 1.13E-56 T 11-10-2018 AYJ52_06790 99b78efb2e0f8c68ab3e68cff2035b90 203 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 27 198 4.2E-31 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AYJ52_06790 99b78efb2e0f8c68ab3e68cff2035b90 203 Gene3D G3DSA:2.60.120.590 19 202 7.4E-58 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily AYJ52_16515 266f5a9a8ef2b5ce52445e43bc96e82c 411 Pfam PF10282 Lactonase, 7-bladed beta-propeller 54 409 2.0E-88 T 11-10-2018 IPR019405 Lactonase, 7-bladed beta propeller AYJ52_16515 266f5a9a8ef2b5ce52445e43bc96e82c 411 SUPERFAMILY SSF51004 89 391 1.11E-43 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AYJ52_16515 266f5a9a8ef2b5ce52445e43bc96e82c 411 Gene3D G3DSA:2.130.10.10 42 411 7.1E-98 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AYJ52_19140 210ff3740bc5ddf0c740b1a8ea84598c 248 Pfam PF01609 Transposase DDE domain 87 243 3.1E-21 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AYJ52_19140 210ff3740bc5ddf0c740b1a8ea84598c 248 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 2.8E-20 T 11-10-2018 IPR025161 Putative transposase IS4/IS5 family AYJ52_11375 385964be126c0c3ca3c4fd45277713a3 120 Pfam PF04663 Phenol hydroxylase conserved region 16 79 1.5E-21 T 11-10-2018 IPR006756 Phenol hydroxylase KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 AYJ52_11375 385964be126c0c3ca3c4fd45277713a3 120 Gene3D G3DSA:3.10.20.560 18 119 3.0E-37 T 11-10-2018 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 942 22.352 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 Gene3D G3DSA:1.20.1580.10 92 493 1.1E-244 T 11-10-2018 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 Pfam PF00005 ABC transporter 625 862 1.4E-11 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 Gene3D G3DSA:3.30.190.20 132 245 1.1E-244 T 11-10-2018 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 SUPERFAMILY SSF52540 617 911 2.34E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 Gene3D G3DSA:1.20.1580.10 694 832 6.4E-142 T 11-10-2018 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 Gene3D G3DSA:1.10.8.280 288 404 1.1E-244 T 11-10-2018 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 Gene3D G3DSA:3.40.50.300 8 596 1.1E-244 T 11-10-2018 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 927 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 SUPERFAMILY SSF52540 6 570 8.18E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_03940 de0a99825a82f7d454602d2b85e9c943 944 Gene3D G3DSA:3.40.50.300 618 938 6.4E-142 T 11-10-2018 AYJ52_03470 2a7ddfd6f7ddf9b88fbf32537db7240e 504 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 11 215 1.6E-32 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 AYJ52_03470 2a7ddfd6f7ddf9b88fbf32537db7240e 504 SUPERFAMILY SSF100950 225 494 6.11E-85 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_03470 2a7ddfd6f7ddf9b88fbf32537db7240e 504 Gene3D G3DSA:3.40.1080.10 13 187 3.9E-17 T 11-10-2018 AYJ52_03470 2a7ddfd6f7ddf9b88fbf32537db7240e 504 SUPERFAMILY SSF100950 4 222 2.61E-75 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_03470 2a7ddfd6f7ddf9b88fbf32537db7240e 504 Gene3D G3DSA:3.40.1080.20 336 477 5.7E-39 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily AYJ52_03470 2a7ddfd6f7ddf9b88fbf32537db7240e 504 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 463 7.0E-41 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AYJ52_03470 2a7ddfd6f7ddf9b88fbf32537db7240e 504 Gene3D G3DSA:3.30.750.70 251 329 7.7E-6 T 11-10-2018 AYJ52_03470 2a7ddfd6f7ddf9b88fbf32537db7240e 504 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 494 3.0E-237 T 11-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 AYJ52_19610 8dafc2147de76028d1e214d5837b461d 389 Gene3D G3DSA:3.30.930.30 2 196 4.7E-47 T 11-10-2018 AYJ52_19610 8dafc2147de76028d1e214d5837b461d 389 Pfam PF03389 MobA/MobL family 46 195 2.0E-15 T 11-10-2018 IPR005053 MobA/MobL protein AYJ52_06820 1b6db5588871830b1feea883f570d776 184 SUPERFAMILY SSF143456 4 184 8.9E-60 T 11-10-2018 AYJ52_06820 1b6db5588871830b1feea883f570d776 184 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 184 33.384 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 AYJ52_06820 1b6db5588871830b1feea883f570d776 184 Pfam PF02622 Uncharacterized ACR, COG1678 15 171 1.5E-44 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 AYJ52_06820 1b6db5588871830b1feea883f570d776 184 Gene3D G3DSA:3.40.1740.10 1 184 4.1E-74 T 11-10-2018 AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 Pfam PF08275 DNA primase catalytic core, N-terminal domain 175 295 5.1E-37 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 SUPERFAMILY SSF56731 165 464 6.02E-93 T 11-10-2018 AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 SUPERFAMILY SSF57783 1 97 2.38E-34 T 11-10-2018 AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 SMART SM00493 303 373 1.1E-15 T 11-10-2018 IPR006171 TOPRIM domain AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 Pfam PF10410 DnaB-helicase binding domain of primase 412 466 2.5E-5 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 Pfam PF01807 CHC2 zinc finger 4 98 8.2E-39 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 Hamap MF_00974 DNA primase [dnaG]. 2 614 26.478 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 Pfam PF13662 Toprim domain 307 370 9.0E-16 T 11-10-2018 IPR006171 TOPRIM domain AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 Gene3D G3DSA:3.90.980.10 164 285 1.3E-37 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 SMART SM00400 34 88 1.7E-30 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 Gene3D G3DSA:3.90.580.10 1 100 1.4E-37 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 AYJ52_09575 1f820782623c9a524db24b9d46b3e7b6 622 Gene3D G3DSA:3.40.1360.10 286 409 7.8E-37 T 11-10-2018 AYJ52_08660 664420a74aa648c3ae9a30ebce55c9be 322 Gene3D G3DSA:3.60.40.10 94 320 4.1E-42 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AYJ52_08660 664420a74aa648c3ae9a30ebce55c9be 322 SUPERFAMILY SSF81606 140 286 7.06E-5 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AYJ52_08660 664420a74aa648c3ae9a30ebce55c9be 322 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 153 313 4.5E-24 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AYJ52_08660 664420a74aa648c3ae9a30ebce55c9be 322 SMART SM00331 126 320 6.3E-12 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AYJ52_12405 04f0c55b63d55caeac113837d8ccefcf 267 Gene3D G3DSA:3.10.129.90 15 253 2.2E-9 T 11-10-2018 AYJ52_12405 04f0c55b63d55caeac113837d8ccefcf 267 Pfam PF13622 Thioesterase-like superfamily 30 260 4.5E-24 T 11-10-2018 AYJ52_12405 04f0c55b63d55caeac113837d8ccefcf 267 SUPERFAMILY SSF54637 160 251 8.02E-6 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_10465 0b466820e76097f35b0bbd7dde6a9d46 534 Pfam PF00463 Isocitrate lyase family 97 270 1.3E-24 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AYJ52_10465 0b466820e76097f35b0bbd7dde6a9d46 534 Pfam PF00463 Isocitrate lyase family 427 521 1.1E-10 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AYJ52_10465 0b466820e76097f35b0bbd7dde6a9d46 534 Pfam PF00463 Isocitrate lyase family 317 396 4.4E-11 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AYJ52_10465 0b466820e76097f35b0bbd7dde6a9d46 534 SUPERFAMILY SSF51621 5 515 5.38E-125 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AYJ52_10465 0b466820e76097f35b0bbd7dde6a9d46 534 Gene3D G3DSA:3.20.20.60 426 514 1.3E-10 T 11-10-2018 AYJ52_10465 0b466820e76097f35b0bbd7dde6a9d46 534 PIRSF PIRSF001362 284 409 5.1E-13 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AYJ52_10465 0b466820e76097f35b0bbd7dde6a9d46 534 PIRSF PIRSF001362 2 277 6.8E-31 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AYJ52_10465 0b466820e76097f35b0bbd7dde6a9d46 534 PIRSF PIRSF001362 415 534 4.0E-7 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AYJ52_17865 d8d3e52e6ba01ee82b9947396d767e11 767 Gene3D G3DSA:2.170.130.10 106 231 9.2E-18 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_17865 d8d3e52e6ba01ee82b9947396d767e11 767 SUPERFAMILY SSF56935 76 767 3.66E-104 T 11-10-2018 AYJ52_17865 d8d3e52e6ba01ee82b9947396d767e11 767 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 120 767 9.1E-117 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_17865 d8d3e52e6ba01ee82b9947396d767e11 767 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 215 1.4E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_17865 d8d3e52e6ba01ee82b9947396d767e11 767 Gene3D G3DSA:2.40.170.20 232 767 1.1E-83 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_17865 d8d3e52e6ba01ee82b9947396d767e11 767 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 750 767 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AYJ52_06825 e78eb789f07e06b2cc6b4ddaca8dfcab 555 PIRSF PIRSF003128 1 551 1.4E-136 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AYJ52_06825 e78eb789f07e06b2cc6b4ddaca8dfcab 555 Gene3D G3DSA:3.40.50.300 219 547 1.5E-47 T 11-10-2018 AYJ52_06825 e78eb789f07e06b2cc6b4ddaca8dfcab 555 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 505 1.1E-18 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AYJ52_06825 e78eb789f07e06b2cc6b4ddaca8dfcab 555 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 545 3.0E-137 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AYJ52_06825 e78eb789f07e06b2cc6b4ddaca8dfcab 555 Gene3D G3DSA:3.40.50.300 1 197 1.7E-21 T 11-10-2018 AYJ52_06825 e78eb789f07e06b2cc6b4ddaca8dfcab 555 SUPERFAMILY SSF52540 1 505 3.29E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17380 2f331ed6c95f7b8b72556a4d26ffe7f1 182 SUPERFAMILY SSF48452 84 179 1.34E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_17380 2f331ed6c95f7b8b72556a4d26ffe7f1 182 Gene3D G3DSA:1.25.40.10 50 182 1.6E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_01665 1dc98586f2b4e90b30fa12ea11b684f9 171 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 8.3E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_01665 1dc98586f2b4e90b30fa12ea11b684f9 171 Gene3D G3DSA:3.30.700.10 7 154 1.5E-7 T 11-10-2018 AYJ52_01665 1dc98586f2b4e90b30fa12ea11b684f9 171 SUPERFAMILY SSF54523 7 145 2.98E-14 T 11-10-2018 AYJ52_01665 1dc98586f2b4e90b30fa12ea11b684f9 171 Pfam PF12019 Type II transport protein GspH 49 147 2.1E-8 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AYJ52_01665 1dc98586f2b4e90b30fa12ea11b684f9 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 3.8E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_05995 0bee219cac03485ea9df1ccd0c9d10f0 134 Pfam PF13411 MerR HTH family regulatory protein 1 66 1.2E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_05995 0bee219cac03485ea9df1ccd0c9d10f0 134 Gene3D G3DSA:1.10.1660.10 1 118 1.4E-23 T 11-10-2018 AYJ52_05995 0bee219cac03485ea9df1ccd0c9d10f0 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.2E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_05995 0bee219cac03485ea9df1ccd0c9d10f0 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.2E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_05995 0bee219cac03485ea9df1ccd0c9d10f0 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.2E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_05995 0bee219cac03485ea9df1ccd0c9d10f0 134 SUPERFAMILY SSF46955 1 119 5.49E-23 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_05995 0bee219cac03485ea9df1ccd0c9d10f0 134 SMART SM00422 1 69 1.8E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_13045 002413ed73fcfc3cb85908fbc02709f1 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 37 124 1.2E-7 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_13045 002413ed73fcfc3cb85908fbc02709f1 403 Gene3D G3DSA:2.40.110.10 128 227 9.4E-27 T 11-10-2018 AYJ52_13045 002413ed73fcfc3cb85908fbc02709f1 403 Gene3D G3DSA:1.10.540.10 20 125 3.0E-16 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_13045 002413ed73fcfc3cb85908fbc02709f1 403 SUPERFAMILY SSF47203 240 402 1.39E-16 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_13045 002413ed73fcfc3cb85908fbc02709f1 403 Gene3D G3DSA:1.20.140.10 228 400 2.3E-46 T 11-10-2018 AYJ52_13045 002413ed73fcfc3cb85908fbc02709f1 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 218 8.4E-9 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_13045 002413ed73fcfc3cb85908fbc02709f1 403 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 13 403 5.9E-150 T 11-10-2018 IPR023922 Sulphate-starvation-induced SfnB AYJ52_13045 002413ed73fcfc3cb85908fbc02709f1 403 SUPERFAMILY SSF56645 28 226 8.38E-38 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_13045 002413ed73fcfc3cb85908fbc02709f1 403 PIRSF PIRSF016578 5 393 7.4E-24 T 11-10-2018 AYJ52_13045 002413ed73fcfc3cb85908fbc02709f1 403 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 245 378 4.3E-14 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_12080 a896733b36bad1ccf74d13e097c5b14c 268 Gene3D G3DSA:1.25.40.590 28 198 2.9E-40 T 11-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily AYJ52_12080 a896733b36bad1ccf74d13e097c5b14c 268 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 34 243 5.1E-58 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AYJ52_12080 a896733b36bad1ccf74d13e097c5b14c 268 Pfam PF09850 Type VI secretion system protein DotU 35 237 9.4E-53 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AYJ52_00525 ff59133959d51a7040169e59fd5b39b1 252 Gene3D G3DSA:3.60.21.10 1 217 3.8E-27 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AYJ52_00525 ff59133959d51a7040169e59fd5b39b1 252 SUPERFAMILY SSF56300 2 242 4.75E-37 T 11-10-2018 AYJ52_00525 ff59133959d51a7040169e59fd5b39b1 252 Pfam PF00149 Calcineurin-like phosphoesterase 2 189 1.9E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AYJ52_04595 bcc9ee081cc59bec87e17a79db2dddc1 182 Gene3D G3DSA:3.10.180.10 1 175 6.7E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_04595 bcc9ee081cc59bec87e17a79db2dddc1 182 SUPERFAMILY SSF54593 2 140 5.37E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_04595 bcc9ee081cc59bec87e17a79db2dddc1 182 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 136 4.5E-18 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AYJ52_05405 151292ea08b625f219cf4932eb95a067 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 3.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_05405 151292ea08b625f219cf4932eb95a067 236 SMART SM00345 22 80 8.4E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_05405 151292ea08b625f219cf4932eb95a067 236 SUPERFAMILY SSF48008 86 223 3.66E-25 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_05405 151292ea08b625f219cf4932eb95a067 236 SMART SM00895 90 217 2.5E-21 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_05405 151292ea08b625f219cf4932eb95a067 236 SUPERFAMILY SSF46785 14 106 3.11E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_05405 151292ea08b625f219cf4932eb95a067 236 Pfam PF07729 FCD domain 90 216 6.9E-25 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_05405 151292ea08b625f219cf4932eb95a067 236 Gene3D G3DSA:1.20.120.530 85 231 5.7E-30 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_05405 151292ea08b625f219cf4932eb95a067 236 Gene3D G3DSA:1.10.10.10 14 81 7.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14195 1aacd236f37c0505ac9faf01d9a9fb73 417 Gene3D G3DSA:2.40.160.10 27 417 1.2E-124 T 11-10-2018 IPR023614 Porin domain superfamily AYJ52_14195 1aacd236f37c0505ac9faf01d9a9fb73 417 Pfam PF03573 outer membrane porin, OprD family 30 416 5.7E-68 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AYJ52_03550 3365557faaa3be1e75727eff7b8d9118 209 Gene3D G3DSA:2.40.50.140 2 77 1.1E-12 T 11-10-2018 AYJ52_03550 3365557faaa3be1e75727eff7b8d9118 209 Pfam PF06961 Protein of unknown function (DUF1294) 127 181 1.7E-20 T 11-10-2018 IPR010718 Protein of unknown function DUF1294 AYJ52_03550 3365557faaa3be1e75727eff7b8d9118 209 SMART SM00357 5 69 2.8E-4 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AYJ52_03550 3365557faaa3be1e75727eff7b8d9118 209 Pfam PF00313 'Cold-shock' DNA-binding domain 8 55 3.6E-8 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_03550 3365557faaa3be1e75727eff7b8d9118 209 SUPERFAMILY SSF50249 8 70 2.94E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_04175 a1ec007748740dc5696b4d034af2d20a 274 Gene3D G3DSA:3.60.10.10 12 273 4.2E-79 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AYJ52_04175 a1ec007748740dc5696b4d034af2d20a 274 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 14 270 1.0E-67 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AYJ52_04175 a1ec007748740dc5696b4d034af2d20a 274 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 18 263 7.8E-20 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AYJ52_04175 a1ec007748740dc5696b4d034af2d20a 274 SUPERFAMILY SSF56219 14 271 3.4E-71 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AYJ52_04175 a1ec007748740dc5696b4d034af2d20a 274 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 14 268 2.0E-64 T 11-10-2018 AYJ52_12230 e721299ad2b1ffcb29e070b0419ec774 1247 SUPERFAMILY SSF52540 217 371 1.99E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16100 22ea26811cc959dfe6ae33b8e053f572 522 Gene3D G3DSA:3.40.47.10 90 522 5.9E-101 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_16100 22ea26811cc959dfe6ae33b8e053f572 522 Pfam PF02803 Thiolase, C-terminal domain 396 522 1.4E-28 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AYJ52_16100 22ea26811cc959dfe6ae33b8e053f572 522 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 104 521 1.5E-113 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_16100 22ea26811cc959dfe6ae33b8e053f572 522 SUPERFAMILY SSF53901 398 521 1.25E-26 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_16100 22ea26811cc959dfe6ae33b8e053f572 522 SUPERFAMILY SSF53901 102 375 9.69E-58 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_16100 22ea26811cc959dfe6ae33b8e053f572 522 Pfam PF00108 Thiolase, N-terminal domain 102 369 5.8E-48 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AYJ52_11320 4e8fa74b92fedc165d52d7fde1f44467 368 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 146 162 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AYJ52_11320 4e8fa74b92fedc165d52d7fde1f44467 368 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 149 226 1.0E-19 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AYJ52_11320 4e8fa74b92fedc165d52d7fde1f44467 368 SUPERFAMILY SSF53901 2 364 1.32E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_11320 4e8fa74b92fedc165d52d7fde1f44467 368 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 275 364 9.3E-21 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AYJ52_11320 4e8fa74b92fedc165d52d7fde1f44467 368 Gene3D G3DSA:3.40.47.10 2 211 2.3E-55 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_11320 4e8fa74b92fedc165d52d7fde1f44467 368 Gene3D G3DSA:3.40.47.10 213 366 1.0E-37 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_05135 2de3a6c7696997210e6d854618963469 160 Gene3D G3DSA:3.10.50.40 11 159 6.0E-38 T 11-10-2018 AYJ52_05135 2de3a6c7696997210e6d854618963469 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 12 146 3.7E-19 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ52_05135 2de3a6c7696997210e6d854618963469 160 SUPERFAMILY SSF54534 12 149 5.3E-36 T 11-10-2018 AYJ52_16855 73e1fc4439288f5f18012786259e767e 150 SUPERFAMILY SSF55729 3 133 8.75E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_16855 73e1fc4439288f5f18012786259e767e 150 Pfam PF13673 Acetyltransferase (GNAT) domain 48 139 4.7E-9 T 11-10-2018 IPR000182 GNAT domain AYJ52_16855 73e1fc4439288f5f18012786259e767e 150 Gene3D G3DSA:3.40.630.30 6 143 3.7E-15 T 11-10-2018 AYJ52_05155 f46291567473ae7690b6f617948ef831 377 Gene3D G3DSA:1.50.10.150 12 366 7.6E-17 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily AYJ52_05155 f46291567473ae7690b6f617948ef831 377 Pfam PF03595 Voltage-dependent anion channel 17 355 1.3E-78 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AYJ52_16445 c87c9b85d6a27ef29b6dd5da12949320 302 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 139 153 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_16445 c87c9b85d6a27ef29b6dd5da12949320 302 SUPERFAMILY SSF55120 86 297 2.4E-47 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_16445 c87c9b85d6a27ef29b6dd5da12949320 302 Gene3D G3DSA:3.30.2350.10 83 299 1.9E-42 T 11-10-2018 AYJ52_16445 c87c9b85d6a27ef29b6dd5da12949320 302 Pfam PF00849 RNA pseudouridylate synthase 100 247 1.1E-21 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_04230 abcdb431c451f779e5049372e20458c0 107 SUPERFAMILY SSF49472 2 107 8.89E-38 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_04230 abcdb431c451f779e5049372e20458c0 107 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 107 4.1E-39 T 11-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AYJ52_04230 abcdb431c451f779e5049372e20458c0 107 ProSitePatterns PS00768 Transthyretin signature 1. 5 20 - T 11-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_04230 abcdb431c451f779e5049372e20458c0 107 Gene3D G3DSA:2.60.40.180 1 107 9.0E-39 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_04230 abcdb431c451f779e5049372e20458c0 107 Pfam PF00576 HIUase/Transthyretin family 2 106 8.4E-36 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_04230 abcdb431c451f779e5049372e20458c0 107 SMART SM00095 2 106 0.0034 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_04230 abcdb431c451f779e5049372e20458c0 107 PRINTS PR00189 Transthyretin signature 1 21 1.8E-8 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_04230 abcdb431c451f779e5049372e20458c0 107 PRINTS PR00189 Transthyretin signature 85 107 1.8E-8 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AYJ52_16610 1c573551fe1fa7691f0d4698c213deda 342 Pfam PF12833 Helix-turn-helix domain 258 335 7.7E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_16610 1c573551fe1fa7691f0d4698c213deda 342 SUPERFAMILY SSF46689 287 337 1.97E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_16610 1c573551fe1fa7691f0d4698c213deda 342 Gene3D G3DSA:1.10.10.60 232 339 1.1E-24 T 11-10-2018 AYJ52_16610 1c573551fe1fa7691f0d4698c213deda 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 206 2.4E-35 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_16610 1c573551fe1fa7691f0d4698c213deda 342 SMART SM00342 251 334 7.3E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_19575 f40dfcbab279074bd95baf9034fa3978 395 Gene3D G3DSA:2.40.30.170 48 297 1.4E-93 T 11-10-2018 AYJ52_19575 f40dfcbab279074bd95baf9034fa3978 395 Gene3D G3DSA:1.10.287.470 94 167 1.4E-93 T 11-10-2018 AYJ52_19575 f40dfcbab279074bd95baf9034fa3978 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 368 8.7E-78 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_19575 f40dfcbab279074bd95baf9034fa3978 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 287 2.2E-19 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_19575 f40dfcbab279074bd95baf9034fa3978 395 Gene3D G3DSA:2.40.50.100 59 203 1.4E-93 T 11-10-2018 AYJ52_19575 f40dfcbab279074bd95baf9034fa3978 395 Gene3D G3DSA:2.40.420.20 298 366 1.4E-93 T 11-10-2018 AYJ52_19575 f40dfcbab279074bd95baf9034fa3978 395 SUPERFAMILY SSF111369 49 292 5.75E-70 T 11-10-2018 AYJ52_13170 dcc8b37c0c14e5eb30e6da5d08319c79 846 Pfam PF00577 Outer membrane usher protein 207 755 1.3E-150 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AYJ52_13170 dcc8b37c0c14e5eb30e6da5d08319c79 846 Gene3D G3DSA:2.60.40.2610 670 760 3.6E-27 T 11-10-2018 AYJ52_13170 dcc8b37c0c14e5eb30e6da5d08319c79 846 Gene3D G3DSA:2.60.40.3110 279 368 2.6E-34 T 11-10-2018 AYJ52_13170 dcc8b37c0c14e5eb30e6da5d08319c79 846 Gene3D G3DSA:2.60.40.2070 763 846 3.9E-15 T 11-10-2018 AYJ52_13170 dcc8b37c0c14e5eb30e6da5d08319c79 846 SUPERFAMILY SSF141729 67 181 1.83E-31 T 11-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 AYJ52_13170 dcc8b37c0c14e5eb30e6da5d08319c79 846 Pfam PF13953 PapC C-terminal domain 769 828 1.7E-15 T 11-10-2018 IPR025949 PapC-like, C-terminal domain AYJ52_13170 dcc8b37c0c14e5eb30e6da5d08319c79 846 Gene3D G3DSA:3.10.20.410 44 167 7.5E-31 T 11-10-2018 AYJ52_13170 dcc8b37c0c14e5eb30e6da5d08319c79 846 Pfam PF13954 PapC N-terminal domain 46 189 1.1E-43 T 11-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 AYJ52_14345 d2ede4c4eaefd40fad504dcb6a86aaaa 195 Gene3D G3DSA:3.40.470.10 5 194 3.3E-20 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AYJ52_14345 d2ede4c4eaefd40fad504dcb6a86aaaa 195 SUPERFAMILY SSF52141 9 190 2.75E-22 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AYJ52_08020 ce50a25e3fb8f43cb6b61836a3de2744 358 Gene3D G3DSA:3.30.1330.60 243 357 5.7E-24 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_08020 ce50a25e3fb8f43cb6b61836a3de2744 358 PRINTS PR01021 OMPA domain signature 312 328 6.7E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_08020 ce50a25e3fb8f43cb6b61836a3de2744 358 PRINTS PR01021 OMPA domain signature 267 289 6.7E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_08020 ce50a25e3fb8f43cb6b61836a3de2744 358 PRINTS PR01021 OMPA domain signature 297 312 6.7E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_08020 ce50a25e3fb8f43cb6b61836a3de2744 358 SUPERFAMILY SSF103088 252 353 3.4E-23 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_08020 ce50a25e3fb8f43cb6b61836a3de2744 358 Pfam PF00691 OmpA family 267 352 2.4E-16 T 11-10-2018 IPR006665 OmpA-like domain AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 509 762 1.6E-71 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 4 244 6.2E-62 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 Gene3D G3DSA:1.20.120.330 770 907 6.6E-43 T 11-10-2018 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 Pfam PF08335 GlnD PII-uridylyltransferase 785 880 9.2E-10 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 Pfam PF08335 GlnD PII-uridylyltransferase 270 409 8.0E-42 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 Gene3D G3DSA:3.30.460.100 13 254 8.4E-59 T 11-10-2018 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 Gene3D G3DSA:3.30.460.100 518 769 8.5E-79 T 11-10-2018 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 SUPERFAMILY SSF81301 481 772 1.28E-77 T 11-10-2018 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 SUPERFAMILY SSF81593 260 409 6.98E-40 T 11-10-2018 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 SUPERFAMILY SSF81593 774 905 2.82E-30 T 11-10-2018 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 SUPERFAMILY SSF81301 3 259 2.45E-67 T 11-10-2018 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 1 907 18.308 T 11-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AYJ52_01990 0fa2db6d58595dee8931d609d54b93b6 916 Gene3D G3DSA:1.20.120.330 258 413 4.7E-50 T 11-10-2018 AYJ52_12290 3edc746a1c121cebf649c3ae1f507394 384 SUPERFAMILY SSF51905 5 222 3.93E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_12290 3edc746a1c121cebf649c3ae1f507394 384 Gene3D G3DSA:3.30.9.10 87 343 3.0E-42 T 11-10-2018 AYJ52_12290 3edc746a1c121cebf649c3ae1f507394 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.1E-5 T 11-10-2018 AYJ52_12290 3edc746a1c121cebf649c3ae1f507394 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.1E-5 T 11-10-2018 AYJ52_12290 3edc746a1c121cebf649c3ae1f507394 384 TIGRFAM TIGR03364 HpnW_proposed: FAD dependent oxidoreductase TIGR03364 7 376 6.7E-91 T 11-10-2018 IPR017741 FAD-dependent oxidoreductase, HpnW AYJ52_12290 3edc746a1c121cebf649c3ae1f507394 384 Gene3D G3DSA:3.50.50.60 7 376 3.0E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_12290 3edc746a1c121cebf649c3ae1f507394 384 Pfam PF01266 FAD dependent oxidoreductase 7 374 1.7E-34 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AYJ52_01030 54f45043502c70812ea5fbc768ba9a81 419 Pfam PF13000 Acetyl-coenzyme A transporter 1 9 157 9.1E-22 T 11-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 AYJ52_01030 54f45043502c70812ea5fbc768ba9a81 419 Gene3D G3DSA:1.20.1250.20 1 410 3.4E-20 T 11-10-2018 AYJ52_01030 54f45043502c70812ea5fbc768ba9a81 419 SUPERFAMILY SSF103473 8 416 3.53E-28 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_00655 1d8c79d753aae877ed91719ad5f2b905 210 SUPERFAMILY SSF51161 65 202 1.14E-36 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_00655 1d8c79d753aae877ed91719ad5f2b905 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AYJ52_00655 1d8c79d753aae877ed91719ad5f2b905 210 Gene3D G3DSA:2.160.10.10 8 209 2.9E-56 T 11-10-2018 AYJ52_00655 1d8c79d753aae877ed91719ad5f2b905 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.0E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_13945 1f45e64061044fe99aacfbe3eec70913 101 SUPERFAMILY SSF160191 1 85 3.14E-28 T 11-10-2018 IPR038068 YcgL-like superfamily AYJ52_13945 1f45e64061044fe99aacfbe3eec70913 101 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 85 2.0E-35 T 11-10-2018 IPR027354 YcgL domain AYJ52_13945 1f45e64061044fe99aacfbe3eec70913 101 Pfam PF05166 YcgL domain 3 84 2.2E-29 T 11-10-2018 IPR027354 YcgL domain AYJ52_13945 1f45e64061044fe99aacfbe3eec70913 101 Hamap MF_01866 Protein YcgL [ycgL]. 1 95 23.94 T 11-10-2018 IPR027354 YcgL domain AYJ52_13945 1f45e64061044fe99aacfbe3eec70913 101 Gene3D G3DSA:3.10.510.20 1 83 1.4E-31 T 11-10-2018 IPR038068 YcgL-like superfamily AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 428 40.465 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 9.4E-79 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 9.4E-79 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 9.4E-79 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 9.4E-79 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 9.4E-79 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 9.4E-79 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 9.4E-79 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 9.4E-79 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 Pfam PF00815 Histidinol dehydrogenase 27 427 4.0E-167 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 Gene3D G3DSA:3.40.50.1980 31 232 1.2E-124 T 11-10-2018 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 2.0E-159 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 PIRSF PIRSF000099 1 429 2.4E-156 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 Gene3D G3DSA:3.40.50.1980 234 350 1.2E-124 T 11-10-2018 AYJ52_08720 04e0ddd02a8b6ef784cfd9cee3f589a7 429 SUPERFAMILY SSF53720 29 428 3.92E-86 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_18195 d1329626e0cbaf50e2d0cf23d25aa5fd 382 SUPERFAMILY SSF56601 4 273 8.77E-77 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_18195 d1329626e0cbaf50e2d0cf23d25aa5fd 382 Gene3D G3DSA:2.60.410.10 273 363 1.5E-29 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AYJ52_18195 d1329626e0cbaf50e2d0cf23d25aa5fd 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 1.4E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AYJ52_18195 d1329626e0cbaf50e2d0cf23d25aa5fd 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 1.4E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AYJ52_18195 d1329626e0cbaf50e2d0cf23d25aa5fd 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 1.4E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AYJ52_18195 d1329626e0cbaf50e2d0cf23d25aa5fd 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 252 3.1E-77 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AYJ52_18195 d1329626e0cbaf50e2d0cf23d25aa5fd 382 Gene3D G3DSA:3.40.710.10 17 271 6.1E-84 T 11-10-2018 AYJ52_18195 d1329626e0cbaf50e2d0cf23d25aa5fd 382 SMART SM00936 273 363 1.2E-33 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AYJ52_18195 d1329626e0cbaf50e2d0cf23d25aa5fd 382 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 363 2.6E-25 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AYJ52_18195 d1329626e0cbaf50e2d0cf23d25aa5fd 382 SUPERFAMILY SSF69189 273 365 6.08E-26 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AYJ52_15625 215fdb13e6d56b07318a74f01a78fbe1 142 Pfam PF01479 S4 domain 13 58 2.1E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_15625 215fdb13e6d56b07318a74f01a78fbe1 142 SUPERFAMILY SSF55174 12 108 3.4E-26 T 11-10-2018 AYJ52_15625 215fdb13e6d56b07318a74f01a78fbe1 142 Gene3D G3DSA:3.10.290.10 5 112 2.5E-35 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AYJ52_15625 215fdb13e6d56b07318a74f01a78fbe1 142 SMART SM00363 13 77 2.3E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_15625 215fdb13e6d56b07318a74f01a78fbe1 142 PIRSF PIRSF016821 10 135 3.1E-39 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AYJ52_12900 5490bf009ba861c1eaf1bdbb059991ac 270 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 3.4E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_12900 5490bf009ba861c1eaf1bdbb059991ac 270 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 7.5E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_12900 5490bf009ba861c1eaf1bdbb059991ac 270 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 5.7E-76 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AYJ52_12900 5490bf009ba861c1eaf1bdbb059991ac 270 Gene3D G3DSA:2.160.10.10 67 189 2.4E-38 T 11-10-2018 AYJ52_12900 5490bf009ba861c1eaf1bdbb059991ac 270 SUPERFAMILY SSF51161 4 169 2.5E-57 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_12900 5490bf009ba861c1eaf1bdbb059991ac 270 Gene3D G3DSA:1.10.3130.10 1 66 1.5E-24 T 11-10-2018 AYJ52_12900 5490bf009ba861c1eaf1bdbb059991ac 270 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 2.2E-4 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AYJ52_18705 1d38fbefc31e9719612a86803547fe44 273 Gene3D G3DSA:1.10.166.10 1 70 1.2E-28 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 AYJ52_18705 1d38fbefc31e9719612a86803547fe44 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 272 7.9E-147 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AYJ52_18705 1d38fbefc31e9719612a86803547fe44 273 SUPERFAMILY SSF51161 2 256 1.39E-73 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_18705 1d38fbefc31e9719612a86803547fe44 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.1E-12 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_18705 1d38fbefc31e9719612a86803547fe44 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AYJ52_18705 1d38fbefc31e9719612a86803547fe44 273 Gene3D G3DSA:2.160.10.10 87 257 2.2E-55 T 11-10-2018 AYJ52_18705 1d38fbefc31e9719612a86803547fe44 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0014 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_18705 1d38fbefc31e9719612a86803547fe44 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 4.3E-25 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AYJ52_18705 1d38fbefc31e9719612a86803547fe44 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 57.262 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AYJ52_09640 e4b15721039471b5e4b2c5353e253d02 548 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 501 6.1E-132 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AYJ52_09640 e4b15721039471b5e4b2c5353e253d02 548 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 500 1.0E-108 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AYJ52_00890 2e26c1a80638ce3f099a0b435e047602 85 Gene3D G3DSA:2.40.50.100 21 85 5.0E-30 T 11-10-2018 AYJ52_00890 2e26c1a80638ce3f099a0b435e047602 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 8.6E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00890 2e26c1a80638ce3f099a0b435e047602 85 SUPERFAMILY SSF110324 2 80 2.27E-33 T 11-10-2018 AYJ52_00890 2e26c1a80638ce3f099a0b435e047602 85 Pfam PF01016 Ribosomal L27 protein 2 82 2.5E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00890 2e26c1a80638ce3f099a0b435e047602 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 27.652 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00890 2e26c1a80638ce3f099a0b435e047602 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.4E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00890 2e26c1a80638ce3f099a0b435e047602 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.4E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00890 2e26c1a80638ce3f099a0b435e047602 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.4E-37 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00890 2e26c1a80638ce3f099a0b435e047602 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 3.0E-18 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_00890 2e26c1a80638ce3f099a0b435e047602 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_06640 2d5e60f57608a1af0dd4075ecc046261 168 Gene3D G3DSA:3.30.70.1730 1 126 5.9E-31 T 11-10-2018 AYJ52_06640 2d5e60f57608a1af0dd4075ecc046261 168 Pfam PF00466 Ribosomal protein L10 6 103 1.1E-23 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AYJ52_06640 2d5e60f57608a1af0dd4075ecc046261 168 SUPERFAMILY SSF160369 5 162 2.09E-43 T 11-10-2018 AYJ52_06640 2d5e60f57608a1af0dd4075ecc046261 168 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 163 25.965 T 11-10-2018 IPR022973 Ribosomal protein L10 AYJ52_06640 2d5e60f57608a1af0dd4075ecc046261 168 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 Gene3D G3DSA:3.30.1360.70 1 110 4.2E-23 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 SMART SM00836 475 596 3.0E-51 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 SUPERFAMILY SSF52374 116 485 2.53E-81 T 11-10-2018 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 Pfam PF00750 tRNA synthetases class I (R) 102 177 4.2E-10 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 Pfam PF00750 tRNA synthetases class I (R) 221 444 7.3E-12 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 SUPERFAMILY SSF55190 19 111 7.85E-21 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 91 9.7E-21 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 SMART SM01016 3 91 4.0E-33 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 2.5E-19 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 2.5E-19 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 2.5E-19 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 344 365 2.5E-19 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 596 6.8E-129 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 Pfam PF05746 DALR anticodon binding domain 475 596 1.5E-32 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 596 24.881 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 Gene3D G3DSA:1.10.730.10 470 596 8.6E-34 T 11-10-2018 AYJ52_05780 d47604b82dbe349349d750be7055e23a 596 SUPERFAMILY SSF47323 470 596 5.56E-33 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_03310 a4fc4393429e1808eca1005b7f7823b8 307 PIRSF PIRSF004486 1 303 9.4E-104 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AYJ52_03310 a4fc4393429e1808eca1005b7f7823b8 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 3 302 37.496 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AYJ52_03310 a4fc4393429e1808eca1005b7f7823b8 307 SUPERFAMILY SSF81799 111 207 9.29E-35 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AYJ52_03310 a4fc4393429e1808eca1005b7f7823b8 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 301 1.3E-108 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AYJ52_03310 a4fc4393429e1808eca1005b7f7823b8 307 SUPERFAMILY SSF53335 3 302 1.18E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_03310 a4fc4393429e1808eca1005b7f7823b8 307 Gene3D G3DSA:1.10.150.170 110 209 7.9E-103 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AYJ52_03310 a4fc4393429e1808eca1005b7f7823b8 307 Pfam PF01795 MraW methylase family 2 301 5.8E-108 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AYJ52_03310 a4fc4393429e1808eca1005b7f7823b8 307 Gene3D G3DSA:3.40.50.150 6 301 7.9E-103 T 11-10-2018 AYJ52_06875 c5d1ea1caa3f1df4add6a80216f90017 109 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 8.0E-36 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AYJ52_06875 c5d1ea1caa3f1df4add6a80216f90017 109 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 8.0E-36 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AYJ52_06875 c5d1ea1caa3f1df4add6a80216f90017 109 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 8.0E-36 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AYJ52_06875 c5d1ea1caa3f1df4add6a80216f90017 109 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 8.0E-36 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AYJ52_06875 c5d1ea1caa3f1df4add6a80216f90017 109 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.1E-21 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AYJ52_06875 c5d1ea1caa3f1df4add6a80216f90017 109 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 6.9E-26 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AYJ52_18145 647b95718574800678da778caf91c565 74 SUPERFAMILY SSF143800 1 67 4.32E-26 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_18145 647b95718574800678da778caf91c565 74 Pfam PF01197 Ribosomal protein L31 1 66 4.8E-30 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_18145 647b95718574800678da778caf91c565 74 Gene3D G3DSA:2.30.170.50 1 70 3.3E-31 T 11-10-2018 AYJ52_18145 647b95718574800678da778caf91c565 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 30.366 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_18145 647b95718574800678da778caf91c565 74 PRINTS PR01249 Ribosomal protein L31 signature 32 47 4.4E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_18145 647b95718574800678da778caf91c565 74 PRINTS PR01249 Ribosomal protein L31 signature 47 65 4.4E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_18145 647b95718574800678da778caf91c565 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.4E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_18145 647b95718574800678da778caf91c565 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_18145 647b95718574800678da778caf91c565 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 7.0E-33 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_00785 f0fbe7af5faf6b652d6a59f3c07a126c 310 Gene3D G3DSA:3.30.70.100 9 110 5.9E-27 T 11-10-2018 AYJ52_00785 f0fbe7af5faf6b652d6a59f3c07a126c 310 Pfam PF00581 Rhodanese-like domain 128 223 4.6E-12 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_00785 f0fbe7af5faf6b652d6a59f3c07a126c 310 SUPERFAMILY SSF52821 122 252 1.65E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_00785 f0fbe7af5faf6b652d6a59f3c07a126c 310 Hamap MF_00469 UPF0176 protein YceA [yceA]. 17 267 42.745 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 AYJ52_00785 f0fbe7af5faf6b652d6a59f3c07a126c 310 SMART SM00450 126 227 6.0E-22 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_00785 f0fbe7af5faf6b652d6a59f3c07a126c 310 Gene3D G3DSA:3.40.250.10 114 259 2.6E-50 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_14830 a6ef7e23cd3fbe0d496fee84e7f0e9de 203 SUPERFAMILY SSF47616 81 198 2.18E-25 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_14830 a6ef7e23cd3fbe0d496fee84e7f0e9de 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 74 3.8E-9 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_14830 a6ef7e23cd3fbe0d496fee84e7f0e9de 203 Pfam PF14497 Glutathione S-transferase, C-terminal domain 103 196 1.5E-11 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AYJ52_14830 a6ef7e23cd3fbe0d496fee84e7f0e9de 203 Gene3D G3DSA:3.40.30.10 3 192 1.3E-56 T 11-10-2018 AYJ52_14830 a6ef7e23cd3fbe0d496fee84e7f0e9de 203 Gene3D G3DSA:1.20.1050.10 83 188 1.3E-56 T 11-10-2018 AYJ52_14830 a6ef7e23cd3fbe0d496fee84e7f0e9de 203 SUPERFAMILY SSF52833 1 85 2.0E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_18405 2daf9ce82168c879183a9ea8d53cabe0 418 SMART SM01329 30 412 3.0E-175 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AYJ52_18405 2daf9ce82168c879183a9ea8d53cabe0 418 Gene3D G3DSA:3.40.718.10 1 417 3.6E-179 T 11-10-2018 AYJ52_18405 2daf9ce82168c879183a9ea8d53cabe0 418 SUPERFAMILY SSF53659 4 416 3.46E-141 T 11-10-2018 AYJ52_18405 2daf9ce82168c879183a9ea8d53cabe0 418 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 416 3.8E-218 T 11-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AYJ52_18405 2daf9ce82168c879183a9ea8d53cabe0 418 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AYJ52_18405 2daf9ce82168c879183a9ea8d53cabe0 418 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 412 1.1E-110 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AYJ52_09635 3ccbc7b042ed1814b06c518648ccbb42 370 SMART SM01329 6 355 5.7E-170 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AYJ52_09635 3ccbc7b042ed1814b06c518648ccbb42 370 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AYJ52_09635 3ccbc7b042ed1814b06c518648ccbb42 370 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 3 358 2.1E-169 T 11-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 AYJ52_09635 3ccbc7b042ed1814b06c518648ccbb42 370 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.7E-84 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AYJ52_09635 3ccbc7b042ed1814b06c518648ccbb42 370 Gene3D G3DSA:3.40.718.10 1 363 1.4E-141 T 11-10-2018 AYJ52_09635 3ccbc7b042ed1814b06c518648ccbb42 370 SUPERFAMILY SSF53659 3 357 9.79E-113 T 11-10-2018 AYJ52_13975 c2d5d589f7a9f8eb25d9a9b8f32d2aaa 363 PIRSF PIRSF001456 3 358 2.7E-135 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AYJ52_13975 c2d5d589f7a9f8eb25d9a9b8f32d2aaa 363 Gene3D G3DSA:3.60.150.10 1 363 1.2E-161 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AYJ52_13975 c2d5d589f7a9f8eb25d9a9b8f32d2aaa 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AYJ52_13975 c2d5d589f7a9f8eb25d9a9b8f32d2aaa 363 SUPERFAMILY SSF103263 4 351 1.57E-143 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AYJ52_13975 c2d5d589f7a9f8eb25d9a9b8f32d2aaa 363 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.658 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AYJ52_13975 c2d5d589f7a9f8eb25d9a9b8f32d2aaa 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AYJ52_13975 c2d5d589f7a9f8eb25d9a9b8f32d2aaa 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AYJ52_13975 c2d5d589f7a9f8eb25d9a9b8f32d2aaa 363 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 8.8E-136 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AYJ52_13975 c2d5d589f7a9f8eb25d9a9b8f32d2aaa 363 Pfam PF01264 Chorismate synthase 10 345 1.4E-136 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AYJ52_18840 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_18840 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AYJ52_18920 f5d34cb565c6dfab6691f1d56811eba2 189 SUPERFAMILY SSF53098 42 184 2.43E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_18920 f5d34cb565c6dfab6691f1d56811eba2 189 Pfam PF01609 Transposase DDE domain 93 183 1.2E-6 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AYJ52_17310 8d3040b5c12dd61ce4b00cf8f4fd88f9 152 Gene3D G3DSA:1.20.1260.50 1 150 1.8E-50 T 11-10-2018 AYJ52_10010 e391271e14295b918370adb94e4a66b9 305 SUPERFAMILY SSF74653 231 302 8.5E-12 T 11-10-2018 AYJ52_10010 e391271e14295b918370adb94e4a66b9 305 Gene3D G3DSA:3.30.1150.10 229 302 4.2E-10 T 11-10-2018 AYJ52_10010 e391271e14295b918370adb94e4a66b9 305 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 232 295 3.3E-12 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AYJ52_10010 e391271e14295b918370adb94e4a66b9 305 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 240 298 3.7E-10 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AYJ52_14635 cb64b0d96a625deafde15582a5d2e8cb 323 SUPERFAMILY SSF51735 1 320 1.88E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14635 cb64b0d96a625deafde15582a5d2e8cb 323 Gene3D G3DSA:3.40.50.720 6 305 4.9E-114 T 11-10-2018 AYJ52_14635 cb64b0d96a625deafde15582a5d2e8cb 323 Gene3D G3DSA:3.90.25.10 178 315 4.9E-114 T 11-10-2018 AYJ52_14635 cb64b0d96a625deafde15582a5d2e8cb 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 206 3.1E-24 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AYJ52_05380 9d97f95c3b1fddfc085fa497931c58b4 553 Pfam PF02652 L-lactate permease 17 543 8.2E-217 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AYJ52_05380 9d97f95c3b1fddfc085fa497931c58b4 553 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 546 8.0E-227 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AYJ52_09105 63e620a06f678614a168434d2615c2a0 427 SUPERFAMILY SSF47240 69 401 6.41E-98 T 11-10-2018 IPR009078 Ferritin-like superfamily AYJ52_09105 63e620a06f678614a168434d2615c2a0 427 PIRSF PIRSF000355 78 427 2.4E-138 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09105 63e620a06f678614a168434d2615c2a0 427 Pfam PF00268 Ribonucleotide reductase, small chain 108 395 3.5E-86 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AYJ52_09105 63e620a06f678614a168434d2615c2a0 427 Gene3D G3DSA:1.10.620.20 85 421 1.6E-110 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AYJ52_08960 ec760d17eafbb25d016fc562d567211d 499 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 3.2E-141 T 11-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane AYJ52_09425 2ef85166e0014aa4564ffe8649ed8b68 249 Pfam PF13489 Methyltransferase domain 25 180 8.1E-12 T 11-10-2018 AYJ52_09425 2ef85166e0014aa4564ffe8649ed8b68 249 SUPERFAMILY SSF53335 10 182 1.24E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_09425 2ef85166e0014aa4564ffe8649ed8b68 249 Gene3D G3DSA:3.40.50.150 34 247 3.9E-25 T 11-10-2018 AYJ52_09425 2ef85166e0014aa4564ffe8649ed8b68 249 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 11 247 2.7E-66 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 AYJ52_09425 2ef85166e0014aa4564ffe8649ed8b68 249 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 3 247 29.359 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 PIRSF PIRSF500136 1 423 5.4E-152 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 Gene3D G3DSA:3.40.50.720 2 197 3.0E-59 T 11-10-2018 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 290 8.0E-25 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 SUPERFAMILY SSF52413 300 417 1.15E-27 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 7 411 5.1E-123 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 SUPERFAMILY SSF48179 201 292 1.09E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 7 176 2.8E-34 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 417 2.6E-21 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 Gene3D G3DSA:3.40.50.720 200 422 1.2E-56 T 11-10-2018 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 PIRSF PIRSF000124 6 422 1.3E-60 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 SMART SM00984 317 417 6.5E-34 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AYJ52_05300 0471a617f3887aadd3fe45592aa1de41 424 SUPERFAMILY SSF51735 7 191 2.75E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_15080 3a8ae3968579d1492da866d687e411cf 388 SUPERFAMILY SSF56645 21 212 2.49E-21 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_15080 3a8ae3968579d1492da866d687e411cf 388 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 237 366 1.2E-20 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_15080 3a8ae3968579d1492da866d687e411cf 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 33 95 1.1E-4 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_15080 3a8ae3968579d1492da866d687e411cf 388 Gene3D G3DSA:1.20.140.10 214 386 2.8E-27 T 11-10-2018 AYJ52_15080 3a8ae3968579d1492da866d687e411cf 388 PIRSF PIRSF016578 2 387 9.2E-88 T 11-10-2018 AYJ52_15080 3a8ae3968579d1492da866d687e411cf 388 Gene3D G3DSA:2.40.110.10 119 211 5.7E-21 T 11-10-2018 AYJ52_15080 3a8ae3968579d1492da866d687e411cf 388 Gene3D G3DSA:1.10.540.10 11 117 6.8E-20 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_15080 3a8ae3968579d1492da866d687e411cf 388 SUPERFAMILY SSF47203 230 375 2.09E-11 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_02725 e69d42929325aebc54d914440db1a9c8 258 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 49 233 26.921 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AYJ52_02725 e69d42929325aebc54d914440db1a9c8 258 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 44 229 1.1E-72 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AYJ52_02725 e69d42929325aebc54d914440db1a9c8 258 Gene3D G3DSA:3.40.50.300 38 235 3.0E-49 T 11-10-2018 AYJ52_02725 e69d42929325aebc54d914440db1a9c8 258 SUPERFAMILY SSF52540 53 235 8.24E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02725 e69d42929325aebc54d914440db1a9c8 258 Pfam PF01926 50S ribosome-binding GTPase 63 176 2.7E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_12675 35ebf9fdf2029a9e1796b1a48a29ad28 211 Gene3D G3DSA:2.30.110.10 1 207 1.3E-65 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AYJ52_12675 35ebf9fdf2029a9e1796b1a48a29ad28 211 Pfam PF04299 Putative FMN-binding domain 1 168 7.9E-63 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type AYJ52_12675 35ebf9fdf2029a9e1796b1a48a29ad28 211 PIRSF PIRSF010372 1 211 4.4E-82 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type AYJ52_12675 35ebf9fdf2029a9e1796b1a48a29ad28 211 SUPERFAMILY SSF50475 12 196 7.5E-40 T 11-10-2018 AYJ52_07855 736b666ec8f50f6a62336ab8791d37f7 218 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 96 169 6.4E-13 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_07855 736b666ec8f50f6a62336ab8791d37f7 218 Gene3D G3DSA:3.90.470.20 96 167 1.8E-29 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_07855 736b666ec8f50f6a62336ab8791d37f7 218 SUPERFAMILY SSF56214 32 86 7.59E-10 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_07855 736b666ec8f50f6a62336ab8791d37f7 218 Gene3D G3DSA:3.90.470.20 42 95 1.8E-29 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_07855 736b666ec8f50f6a62336ab8791d37f7 218 SUPERFAMILY SSF56214 95 206 1.19E-20 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_15120 8fc5ae0f7e857debeb8389343eb169b2 414 Gene3D G3DSA:2.40.110.10 136 251 4.6E-42 T 11-10-2018 AYJ52_15120 8fc5ae0f7e857debeb8389343eb169b2 414 SUPERFAMILY SSF47203 250 403 1.06E-38 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_15120 8fc5ae0f7e857debeb8389343eb169b2 414 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 239 2.8E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_15120 8fc5ae0f7e857debeb8389343eb169b2 414 Gene3D G3DSA:1.10.540.10 1 135 3.5E-51 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_15120 8fc5ae0f7e857debeb8389343eb169b2 414 SUPERFAMILY SSF56645 3 264 8.25E-64 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_15120 8fc5ae0f7e857debeb8389343eb169b2 414 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 7.3E-31 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_15120 8fc5ae0f7e857debeb8389343eb169b2 414 Gene3D G3DSA:1.20.140.10 252 406 3.2E-34 T 11-10-2018 AYJ52_15120 8fc5ae0f7e857debeb8389343eb169b2 414 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 132 6.8E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_18670 a38ea00ad86c25eacc12f3641e2bed1b 335 Pfam PF13531 Bacterial extracellular solute-binding protein 47 281 1.2E-42 T 11-10-2018 AYJ52_18670 a38ea00ad86c25eacc12f3641e2bed1b 335 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 327 1.7E-143 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AYJ52_18670 a38ea00ad86c25eacc12f3641e2bed1b 335 SUPERFAMILY SSF53850 21 328 1.09E-83 T 11-10-2018 AYJ52_18670 a38ea00ad86c25eacc12f3641e2bed1b 335 Gene3D G3DSA:3.40.190.10 28 296 5.2E-130 T 11-10-2018 AYJ52_18670 a38ea00ad86c25eacc12f3641e2bed1b 335 Gene3D G3DSA:3.40.190.10 116 326 5.2E-130 T 11-10-2018 AYJ52_18670 a38ea00ad86c25eacc12f3641e2bed1b 335 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 147 155 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AYJ52_13705 1d440db26f4107a70e0937e18685d90e 172 SMART SM00271 1 61 2.1E-8 T 11-10-2018 IPR001623 DnaJ domain AYJ52_13705 1d440db26f4107a70e0937e18685d90e 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 160 17.055 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AYJ52_13705 1d440db26f4107a70e0937e18685d90e 172 Pfam PF00226 DnaJ domain 3 65 3.5E-9 T 11-10-2018 IPR001623 DnaJ domain AYJ52_13705 1d440db26f4107a70e0937e18685d90e 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 15 158 7.8E-26 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AYJ52_13705 1d440db26f4107a70e0937e18685d90e 172 SUPERFAMILY SSF46565 1 68 4.97E-14 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AYJ52_13705 1d440db26f4107a70e0937e18685d90e 172 SUPERFAMILY SSF47144 75 161 6.02E-18 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AYJ52_13705 1d440db26f4107a70e0937e18685d90e 172 Gene3D G3DSA:1.10.287.110 1 74 1.2E-17 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AYJ52_13705 1d440db26f4107a70e0937e18685d90e 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 82 153 2.9E-14 T 11-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AYJ52_13705 1d440db26f4107a70e0937e18685d90e 172 Gene3D G3DSA:1.20.1280.20 75 161 7.6E-19 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AYJ52_16205 c8e6f10c6745b12dd856c8b795469358 169 Gene3D G3DSA:3.10.129.10 31 168 5.3E-35 T 11-10-2018 AYJ52_16205 c8e6f10c6745b12dd856c8b795469358 169 SUPERFAMILY SSF54637 37 165 1.64E-18 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_16205 c8e6f10c6745b12dd856c8b795469358 169 Pfam PF14539 Domain of unknown function (DUF4442) 38 165 3.4E-45 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AYJ52_03895 68bed34e20383ea8b6b6ae7ab60e32ad 454 SUPERFAMILY SSF103473 6 384 5.1E-54 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_03895 68bed34e20383ea8b6b6ae7ab60e32ad 454 Pfam PF07690 Major Facilitator Superfamily 15 349 5.9E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_03895 68bed34e20383ea8b6b6ae7ab60e32ad 454 Gene3D G3DSA:3.30.70.100 385 448 9.2E-8 T 11-10-2018 AYJ52_03895 68bed34e20383ea8b6b6ae7ab60e32ad 454 Gene3D G3DSA:1.20.1250.20 1 384 1.4E-68 T 11-10-2018 AYJ52_04150 ab4c0595e35e239dc2409af8531b96b0 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 2.4E-40 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AYJ52_04150 ab4c0595e35e239dc2409af8531b96b0 314 SUPERFAMILY SSF52440 1 121 2.01E-40 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_04150 ab4c0595e35e239dc2409af8531b96b0 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 310 3.8E-129 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AYJ52_04150 ab4c0595e35e239dc2409af8531b96b0 314 Gene3D G3DSA:3.40.50.20 6 113 1.0E-109 T 11-10-2018 AYJ52_04150 ab4c0595e35e239dc2409af8531b96b0 314 SUPERFAMILY SSF56059 122 309 1.0E-56 T 11-10-2018 AYJ52_04150 ab4c0595e35e239dc2409af8531b96b0 314 Gene3D G3DSA:3.30.1490.20 136 200 1.0E-109 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AYJ52_04150 ab4c0595e35e239dc2409af8531b96b0 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 159.955 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AYJ52_04150 ab4c0595e35e239dc2409af8531b96b0 314 Gene3D G3DSA:3.30.470.20 114 294 1.0E-109 T 11-10-2018 AYJ52_04150 ab4c0595e35e239dc2409af8531b96b0 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 1.5E-76 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AYJ52_07280 5d4c3830a961eaa8ac6a5b817891116d 216 Gene3D G3DSA:1.20.1440.100 15 88 9.2E-70 T 11-10-2018 AYJ52_07280 5d4c3830a961eaa8ac6a5b817891116d 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 199 3.9E-40 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AYJ52_07280 5d4c3830a961eaa8ac6a5b817891116d 216 SUPERFAMILY SSF56784 1 212 7.07E-32 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_07280 5d4c3830a961eaa8ac6a5b817891116d 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 183 1.9E-31 T 11-10-2018 AYJ52_07280 5d4c3830a961eaa8ac6a5b817891116d 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 9.3E-21 T 11-10-2018 AYJ52_07280 5d4c3830a961eaa8ac6a5b817891116d 216 Gene3D G3DSA:3.40.50.1000 3 211 9.2E-70 T 11-10-2018 IPR023214 HAD superfamily AYJ52_07205 b3bf82b65c18e5cdc69f8bb983f7f51d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.8E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_07205 b3bf82b65c18e5cdc69f8bb983f7f51d 298 Gene3D G3DSA:1.10.10.10 3 92 5.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_07205 b3bf82b65c18e5cdc69f8bb983f7f51d 298 Pfam PF03466 LysR substrate binding domain 88 288 4.2E-35 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_07205 b3bf82b65c18e5cdc69f8bb983f7f51d 298 Gene3D G3DSA:3.40.190.290 93 289 8.0E-59 T 11-10-2018 AYJ52_07205 b3bf82b65c18e5cdc69f8bb983f7f51d 298 SUPERFAMILY SSF46785 4 88 4.96E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_07205 b3bf82b65c18e5cdc69f8bb983f7f51d 298 SUPERFAMILY SSF53850 90 290 3.8E-38 T 11-10-2018 AYJ52_19755 9f60796c6974ee1423e32f01a31957df 90 Gene3D G3DSA:1.10.260.40 2 90 5.6E-21 T 11-10-2018 AYJ52_19755 9f60796c6974ee1423e32f01a31957df 90 Pfam PF01381 Helix-turn-helix 37 75 1.1E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_19755 9f60796c6974ee1423e32f01a31957df 90 SUPERFAMILY SSF47413 37 80 1.26E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_19755 9f60796c6974ee1423e32f01a31957df 90 SMART SM00530 36 90 1.1E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_19630 9f60796c6974ee1423e32f01a31957df 90 Gene3D G3DSA:1.10.260.40 2 90 5.6E-21 T 11-10-2018 AYJ52_19630 9f60796c6974ee1423e32f01a31957df 90 Pfam PF01381 Helix-turn-helix 37 75 1.1E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_19630 9f60796c6974ee1423e32f01a31957df 90 SUPERFAMILY SSF47413 37 80 1.26E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_19630 9f60796c6974ee1423e32f01a31957df 90 SMART SM00530 36 90 1.1E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_07705 0dd0f783221dc64d9f800335df6dda1d 183 Gene3D G3DSA:1.20.144.10 62 174 4.4E-21 T 11-10-2018 AYJ52_07705 0dd0f783221dc64d9f800335df6dda1d 183 Pfam PF01569 PAP2 superfamily 67 175 7.2E-22 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AYJ52_07705 0dd0f783221dc64d9f800335df6dda1d 183 SUPERFAMILY SSF48317 9 175 4.19E-37 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AYJ52_07705 0dd0f783221dc64d9f800335df6dda1d 183 SMART SM00014 63 173 6.4E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AYJ52_08380 8083e2036ed01fbfeee89f9a0682062d 375 Gene3D G3DSA:3.40.50.720 3 369 1.6E-131 T 11-10-2018 AYJ52_08380 8083e2036ed01fbfeee89f9a0682062d 375 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 169 194 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AYJ52_08380 8083e2036ed01fbfeee89f9a0682062d 375 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 371 6.6E-74 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AYJ52_08380 8083e2036ed01fbfeee89f9a0682062d 375 SMART SM01002 145 316 3.9E-77 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AYJ52_08380 8083e2036ed01fbfeee89f9a0682062d 375 SUPERFAMILY SSF51735 136 321 2.94E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_08380 8083e2036ed01fbfeee89f9a0682062d 375 SUPERFAMILY SSF52283 1 167 6.89E-48 T 11-10-2018 AYJ52_08380 8083e2036ed01fbfeee89f9a0682062d 375 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 11-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AYJ52_08380 8083e2036ed01fbfeee89f9a0682062d 375 SMART SM01003 4 136 4.0E-53 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AYJ52_08380 8083e2036ed01fbfeee89f9a0682062d 375 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 6.8E-38 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AYJ52_08380 8083e2036ed01fbfeee89f9a0682062d 375 Gene3D G3DSA:3.40.50.720 136 323 1.6E-131 T 11-10-2018 AYJ52_07895 157e512bea4274d27480afb36ef3973f 468 Gene3D G3DSA:1.20.1600.10 59 460 4.4E-105 T 11-10-2018 AYJ52_07895 157e512bea4274d27480afb36ef3973f 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 460 2.1E-85 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AYJ52_07895 157e512bea4274d27480afb36ef3973f 468 Gene3D G3DSA:2.20.200.10 105 350 4.4E-105 T 11-10-2018 AYJ52_07895 157e512bea4274d27480afb36ef3973f 468 Pfam PF02321 Outer membrane efflux protein 281 459 2.4E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_07895 157e512bea4274d27480afb36ef3973f 468 Pfam PF02321 Outer membrane efflux protein 68 251 2.9E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_07895 157e512bea4274d27480afb36ef3973f 468 SUPERFAMILY SSF56954 4 461 8.37E-92 T 11-10-2018 AYJ52_02910 5b81d393ab0ff89d52834d296c45c45b 300 SUPERFAMILY SSF103481 49 150 2.22E-17 T 11-10-2018 AYJ52_02910 5b81d393ab0ff89d52834d296c45c45b 300 SUPERFAMILY SSF103481 194 297 5.62E-16 T 11-10-2018 AYJ52_02910 5b81d393ab0ff89d52834d296c45c45b 300 Pfam PF00892 EamA-like transporter family 161 292 2.9E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_02910 5b81d393ab0ff89d52834d296c45c45b 300 Pfam PF00892 EamA-like transporter family 17 147 8.5E-28 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_17715 ff53772e558391ff8e982e52d060e48b 169 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 1 159 21.535 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AYJ52_17715 ff53772e558391ff8e982e52d060e48b 169 Gene3D G3DSA:3.40.1410.10 2 159 2.4E-35 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AYJ52_17715 ff53772e558391ff8e982e52d060e48b 169 Pfam PF04345 Chorismate lyase 13 153 1.5E-17 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AYJ52_17715 ff53772e558391ff8e982e52d060e48b 169 SUPERFAMILY SSF64288 11 158 9.42E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AYJ52_11530 e19a020a1501922f2a7f62af4829028f 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 8.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_11530 e19a020a1501922f2a7f62af4829028f 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 8.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_11530 e19a020a1501922f2a7f62af4829028f 186 Gene3D G3DSA:1.10.357.10 5 178 1.5E-18 T 11-10-2018 AYJ52_11530 e19a020a1501922f2a7f62af4829028f 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 1.7E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_11530 e19a020a1501922f2a7f62af4829028f 186 SUPERFAMILY SSF46689 6 74 2.41E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11140 bf18ce14181beb418bd348f27b890776 188 SUPERFAMILY SSF53098 2 187 9.56E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_11140 bf18ce14181beb418bd348f27b890776 188 Pfam PF01351 Ribonuclease HII 4 181 3.0E-40 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain AYJ52_11140 bf18ce14181beb418bd348f27b890776 188 Gene3D G3DSA:3.30.420.10 1 187 1.4E-75 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_11140 bf18ce14181beb418bd348f27b890776 188 Hamap MF_00052_B Ribonuclease HII [rnhB]. 2 182 37.155 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 AYJ52_18655 b4b6b6a6d2f455226a00cefd5d86a95d 199 SUPERFAMILY SSF52540 1 197 8.13E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18655 b4b6b6a6d2f455226a00cefd5d86a95d 199 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 191 1.8E-54 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AYJ52_18655 b4b6b6a6d2f455226a00cefd5d86a95d 199 Hamap MF_00165 Thymidylate kinase [tmk]. 1 198 27.913 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AYJ52_18655 b4b6b6a6d2f455226a00cefd5d86a95d 199 Pfam PF02223 Thymidylate kinase 5 193 2.7E-53 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AYJ52_18655 b4b6b6a6d2f455226a00cefd5d86a95d 199 Gene3D G3DSA:3.40.50.300 1 199 1.4E-65 T 11-10-2018 AYJ52_12455 57c57b5bbedd02bcd7c4e1daccb3ca74 223 SUPERFAMILY SSF53335 9 221 1.03E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_12455 57c57b5bbedd02bcd7c4e1daccb3ca74 223 Gene3D G3DSA:3.40.50.150 5 223 2.2E-40 T 11-10-2018 AYJ52_12455 57c57b5bbedd02bcd7c4e1daccb3ca74 223 Pfam PF13649 Methyltransferase domain 46 141 1.8E-14 T 11-10-2018 AYJ52_08365 fd1069c66da6e380359f5b249d3d9bd4 396 SUPERFAMILY SSF103473 8 384 3.66E-44 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_08365 fd1069c66da6e380359f5b249d3d9bd4 396 Gene3D G3DSA:1.20.1250.20 7 383 1.4E-36 T 11-10-2018 AYJ52_08365 fd1069c66da6e380359f5b249d3d9bd4 396 Pfam PF07690 Major Facilitator Superfamily 21 349 3.3E-24 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_05790 211d76cbf0b754af3598610e9fba9550 306 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 4 297 2.6E-66 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AYJ52_05790 211d76cbf0b754af3598610e9fba9550 306 SUPERFAMILY SSF54909 3 302 7.87E-89 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_05790 211d76cbf0b754af3598610e9fba9550 306 Pfam PF04261 Dyp-type peroxidase family 28 298 7.2E-70 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AYJ52_08630 a2c694cf3757d9b9898eb032d8bea5fc 496 Gene3D G3DSA:3.30.300.160 3 84 5.5E-7 T 11-10-2018 AYJ52_08630 a2c694cf3757d9b9898eb032d8bea5fc 496 SUPERFAMILY SSF52540 102 490 2.6E-102 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_08630 a2c694cf3757d9b9898eb032d8bea5fc 496 Gene3D G3DSA:3.40.50.300 218 496 8.7E-116 T 11-10-2018 AYJ52_08630 a2c694cf3757d9b9898eb032d8bea5fc 496 Gene3D G3DSA:3.30.450.90 85 217 5.5E-52 T 11-10-2018 AYJ52_08630 a2c694cf3757d9b9898eb032d8bea5fc 496 Pfam PF00437 Type II/IV secretion system protein 119 384 2.8E-88 T 11-10-2018 IPR001482 Type II/IV secretion system protein AYJ52_08630 a2c694cf3757d9b9898eb032d8bea5fc 496 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 8 490 1.0E-209 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AYJ52_08630 a2c694cf3757d9b9898eb032d8bea5fc 496 SUPERFAMILY SSF160246 8 70 4.19E-15 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AYJ52_08630 a2c694cf3757d9b9898eb032d8bea5fc 496 SMART SM00382 245 368 2.1E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_08630 a2c694cf3757d9b9898eb032d8bea5fc 496 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 312 326 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AYJ52_13610 dcbd15c7112d6154346f24a18ba2eb88 670 Gene3D G3DSA:1.10.1370.40 64 661 8.8E-169 T 11-10-2018 AYJ52_13610 dcbd15c7112d6154346f24a18ba2eb88 670 Pfam PF01432 Peptidase family M3 229 663 1.2E-106 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AYJ52_13610 dcbd15c7112d6154346f24a18ba2eb88 670 SUPERFAMILY SSF55486 34 662 4.28E-136 T 11-10-2018 AYJ52_13610 dcbd15c7112d6154346f24a18ba2eb88 670 Gene3D G3DSA:1.10.1370.10 153 599 8.8E-169 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AYJ52_13410 795ebf28ad6e43449ab6b034043df7ca 229 Pfam PF00483 Nucleotidyl transferase 2 135 2.9E-18 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AYJ52_13410 795ebf28ad6e43449ab6b034043df7ca 229 Gene3D G3DSA:3.90.550.10 1 226 4.1E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_13410 795ebf28ad6e43449ab6b034043df7ca 229 SUPERFAMILY SSF53448 1 223 9.24E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_14545 cb7b564913935db52d1b686785a0fb29 442 Gene3D G3DSA:1.20.1600.10 31 440 9.0E-69 T 11-10-2018 AYJ52_14545 cb7b564913935db52d1b686785a0fb29 442 Pfam PF02321 Outer membrane efflux protein 243 418 1.5E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_14545 cb7b564913935db52d1b686785a0fb29 442 Pfam PF02321 Outer membrane efflux protein 33 223 9.4E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_14545 cb7b564913935db52d1b686785a0fb29 442 SUPERFAMILY SSF56954 5 427 3.14E-72 T 11-10-2018 AYJ52_03070 c32f689b3e30baab9b89a33ed5a3d8e7 147 Pfam PF01814 Hemerythrin HHE cation binding domain 3 119 7.6E-13 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AYJ52_02745 937cb279ce2dc6de49dfd888c1182454 857 PIRSF PIRSF000437 30 840 2.6E-229 T 11-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AYJ52_02745 937cb279ce2dc6de49dfd888c1182454 857 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 23 832 23.82 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AYJ52_02745 937cb279ce2dc6de49dfd888c1182454 857 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 30 823 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AYJ52_02745 937cb279ce2dc6de49dfd888c1182454 857 SMART SM00563 317 444 3.8E-25 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AYJ52_02745 937cb279ce2dc6de49dfd888c1182454 857 Pfam PF01553 Acyltransferase 300 440 2.6E-20 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AYJ52_02745 937cb279ce2dc6de49dfd888c1182454 857 SUPERFAMILY SSF69593 256 500 1.83E-25 T 11-10-2018 AYJ52_02745 937cb279ce2dc6de49dfd888c1182454 857 PIRSF PIRSF500064 13 839 6.7E-235 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AYJ52_07275 9aaca6e02eff1677fc80e0b17aedbd53 161 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.373 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH AYJ52_07275 9aaca6e02eff1677fc80e0b17aedbd53 161 Gene3D G3DSA:3.90.79.10 1 155 1.6E-46 T 11-10-2018 AYJ52_07275 9aaca6e02eff1677fc80e0b17aedbd53 161 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AYJ52_07275 9aaca6e02eff1677fc80e0b17aedbd53 161 SUPERFAMILY SSF55811 7 155 6.77E-33 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_07275 9aaca6e02eff1677fc80e0b17aedbd53 161 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.5E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AYJ52_07275 9aaca6e02eff1677fc80e0b17aedbd53 161 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.5E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AYJ52_07275 9aaca6e02eff1677fc80e0b17aedbd53 161 Pfam PF00293 NUDIX domain 7 145 5.6E-26 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_09610 7524792b02ced70625215ce99b1aee4c 87 Pfam PF00037 4Fe-4S binding domain 5 24 1.9E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AYJ52_09610 7524792b02ced70625215ce99b1aee4c 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ52_09610 7524792b02ced70625215ce99b1aee4c 87 SUPERFAMILY SSF54862 4 76 7.23E-19 T 11-10-2018 AYJ52_09610 7524792b02ced70625215ce99b1aee4c 87 Gene3D G3DSA:3.30.70.20 2 81 1.6E-31 T 11-10-2018 AYJ52_14570 6913abcc716345a2bb7bb557a39e16fb 464 Pfam PF02219 Methylenetetrahydrofolate reductase 64 262 1.0E-20 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AYJ52_14570 6913abcc716345a2bb7bb557a39e16fb 464 SUPERFAMILY SSF51730 1 279 1.96E-43 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AYJ52_14570 6913abcc716345a2bb7bb557a39e16fb 464 Gene3D G3DSA:3.20.20.220 28 276 6.6E-28 T 11-10-2018 AYJ52_14570 6913abcc716345a2bb7bb557a39e16fb 464 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 360 442 1.1E-18 T 11-10-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal AYJ52_01970 9629b0bc78675ebac663cfd1c1afd8fd 331 Pfam PF13439 Glycosyltransferase Family 4 13 147 1.9E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AYJ52_01970 9629b0bc78675ebac663cfd1c1afd8fd 331 Pfam PF00534 Glycosyl transferases group 1 155 292 4.3E-24 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AYJ52_01970 9629b0bc78675ebac663cfd1c1afd8fd 331 SUPERFAMILY SSF53756 1 328 4.0E-63 T 11-10-2018 AYJ52_01970 9629b0bc78675ebac663cfd1c1afd8fd 331 Gene3D G3DSA:3.40.50.2000 155 311 1.2E-32 T 11-10-2018 AYJ52_01970 9629b0bc78675ebac663cfd1c1afd8fd 331 Gene3D G3DSA:3.40.50.2000 1 154 1.8E-22 T 11-10-2018 AYJ52_12070 1df7f7f22d69ff44959b1eae0e986fcb 364 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 131 9.7E-34 T 11-10-2018 IPR010657 ImpA, N-terminal AYJ52_12070 1df7f7f22d69ff44959b1eae0e986fcb 364 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 3 356 3.2E-112 T 11-10-2018 IPR017740 Type VI secretion system-associated, ImpA AYJ52_00135 bc598a21b5792672c19dd750892ad58c 495 SUPERFAMILY SSF56954 12 477 2.35E-57 T 11-10-2018 AYJ52_00135 bc598a21b5792672c19dd750892ad58c 495 Pfam PF02321 Outer membrane efflux protein 40 279 2.1E-13 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_00135 bc598a21b5792672c19dd750892ad58c 495 Pfam PF02321 Outer membrane efflux protein 310 474 7.6E-18 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_04320 4dd9bfaf2df6488902d2b9206e83171b 173 SUPERFAMILY SSF158442 11 159 1.57E-41 T 11-10-2018 IPR023380 DsbB-like superfamily AYJ52_04320 4dd9bfaf2df6488902d2b9206e83171b 173 Pfam PF02600 Disulfide bond formation protein DsbB 6 157 8.2E-41 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AYJ52_04320 4dd9bfaf2df6488902d2b9206e83171b 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 165 22.97 T 11-10-2018 IPR022920 Disulphide bond formation protein DsbB AYJ52_04320 4dd9bfaf2df6488902d2b9206e83171b 173 Gene3D G3DSA:1.20.1550.10 3 172 1.7E-49 T 11-10-2018 IPR023380 DsbB-like superfamily AYJ52_15090 5d0b0c12d397fbca6e858ef28308d6b7 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 1.4E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_15090 5d0b0c12d397fbca6e858ef28308d6b7 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 1.4E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_15090 5d0b0c12d397fbca6e858ef28308d6b7 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 128 148 1.4E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_15090 5d0b0c12d397fbca6e858ef28308d6b7 155 SUPERFAMILY SSF46785 17 152 2.55E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_15090 5d0b0c12d397fbca6e858ef28308d6b7 155 Pfam PF01047 MarR family 58 102 7.0E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_15090 5d0b0c12d397fbca6e858ef28308d6b7 155 SMART SM00347 38 138 1.5E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_15090 5d0b0c12d397fbca6e858ef28308d6b7 155 Gene3D G3DSA:1.10.10.10 4 152 9.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_16380 54797dd98446e579c9058fa7911c424c 461 Gene3D G3DSA:2.30.170.30 1 54 2.5E-22 T 11-10-2018 AYJ52_16380 54797dd98446e579c9058fa7911c424c 461 Gene3D G3DSA:3.20.20.70 142 450 3.1E-146 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_16380 54797dd98446e579c9058fa7911c424c 461 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 442 3.5E-218 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AYJ52_16380 54797dd98446e579c9058fa7911c424c 461 Gene3D G3DSA:1.10.220.70 55 141 2.1E-34 T 11-10-2018 AYJ52_16380 54797dd98446e579c9058fa7911c424c 461 PIRSF PIRSF018788 1 459 1.2E-232 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AYJ52_13855 5e5a4cbfc0a681d94c08d32c26339e40 391 Pfam PF02684 Lipid-A-disaccharide synthetase 8 373 1.3E-106 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AYJ52_13855 5e5a4cbfc0a681d94c08d32c26339e40 391 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 377 1.2E-104 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AYJ52_13855 5e5a4cbfc0a681d94c08d32c26339e40 391 SUPERFAMILY SSF53756 7 366 1.45E-28 T 11-10-2018 AYJ52_13855 5e5a4cbfc0a681d94c08d32c26339e40 391 Gene3D G3DSA:3.40.50.2000 201 367 2.6E-6 T 11-10-2018 AYJ52_13855 5e5a4cbfc0a681d94c08d32c26339e40 391 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 390 35.92 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AYJ52_01335 43950211c349a3a9f045229fedbe7e46 397 SUPERFAMILY SSF90123 94 389 9.22E-9 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_01335 43950211c349a3a9f045229fedbe7e46 397 Pfam PF05992 SbmA/BacA-like family 84 396 1.1E-155 T 11-10-2018 IPR009248 SbmA/BacA-like GO:0015833|GO:0016021|GO:1904680 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 Gene3D G3DSA:1.10.10.10 212 288 4.0E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 81 94 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 PIRSF PIRSF000770 12 288 3.5E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 SUPERFAMILY SSF88659 193 285 1.87E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 255 281 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 Gene3D G3DSA:1.20.120.1810 19 126 2.0E-27 T 11-10-2018 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 5 287 52.359 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 Pfam PF04542 Sigma-70 region 2 57 126 2.7E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 Pfam PF04545 Sigma-70, region 4 232 282 3.1E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 PRINTS PR00046 Major sigma-70 factor signature 255 270 9.6E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 PRINTS PR00046 Major sigma-70 factor signature 236 248 9.6E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 PRINTS PR00046 Major sigma-70 factor signature 270 281 9.6E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 PRINTS PR00046 Major sigma-70 factor signature 81 94 9.6E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 SUPERFAMILY SSF88946 19 126 5.49E-40 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 286 5.6E-124 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 Pfam PF00140 Sigma-70 factor, region 1.2 20 44 1.1E-5 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AYJ52_17255 2b1e9095e9829f5feddd0779d8bcabc5 288 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 285 7.1E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 7 261 1.4E-98 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 19 47 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 Gene3D G3DSA:2.160.10.10 1 195 4.8E-63 T 11-10-2018 AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 4 262 43.166 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 PIRSF PIRSF000456 4 262 1.8E-104 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 152 180 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 7 38 1.2E-9 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 8.1E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 SUPERFAMILY SSF51161 3 262 3.34E-79 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 179 261 4.9E-25 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 AYJ52_15650 35371b561023778bfe754f715d3dc20f 262 Gene3D G3DSA:1.20.1180.10 196 262 7.0E-26 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 AYJ52_09625 f266f03cf2c4aa429c060a621655d837 394 SUPERFAMILY SSF56935 96 394 3.46E-6 T 11-10-2018 AYJ52_09625 f266f03cf2c4aa429c060a621655d837 394 Pfam PF07396 Phosphate-selective porin O and P 100 198 1.2E-5 T 11-10-2018 IPR010870 Phosphate-selective porin O/P AYJ52_06225 b250e512bd5675ec6710290a7b745835 334 SUPERFAMILY SSF160240 238 311 8.63E-5 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AYJ52_06225 b250e512bd5675ec6710290a7b745835 334 SUPERFAMILY SSF161111 38 234 1.57E-57 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_06225 b250e512bd5675ec6710290a7b745835 334 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 38 311 9.4E-86 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_06225 b250e512bd5675ec6710290a7b745835 334 Pfam PF01545 Cation efflux family 43 233 5.3E-48 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_06225 b250e512bd5675ec6710290a7b745835 334 Gene3D G3DSA:1.20.1510.10 38 233 5.9E-45 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_17285 6b8b0c1f95730259479802bd3cad41ca 210 Gene3D G3DSA:3.40.50.1820 1 209 2.3E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17285 6b8b0c1f95730259479802bd3cad41ca 210 SUPERFAMILY SSF53474 3 207 3.1E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_16070 34bf1c819c0850668b48c3e9c4f1b888 593 Gene3D G3DSA:2.60.120.1230 210 303 3.8E-11 T 11-10-2018 AYJ52_16070 34bf1c819c0850668b48c3e9c4f1b888 593 Gene3D G3DSA:2.60.120.1230 304 397 1.9E-6 T 11-10-2018 AYJ52_16070 34bf1c819c0850668b48c3e9c4f1b888 593 Gene3D G3DSA:2.60.120.1230 117 209 5.1E-6 T 11-10-2018 AYJ52_16070 34bf1c819c0850668b48c3e9c4f1b888 593 Gene3D G3DSA:2.60.120.1230 15 116 5.5E-11 T 11-10-2018 AYJ52_16070 34bf1c819c0850668b48c3e9c4f1b888 593 Gene3D G3DSA:3.40.390.10 441 567 2.0E-5 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AYJ52_16070 34bf1c819c0850668b48c3e9c4f1b888 593 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 421 529 1.4E-5 T 11-10-2018 AYJ52_16070 34bf1c819c0850668b48c3e9c4f1b888 593 SUPERFAMILY SSF55486 394 553 2.2E-12 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 461 5.8E-27 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 2.8E-29 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 2.8E-29 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.8E-29 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 2.8E-29 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 2.8E-29 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 2.0E-51 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 49 64 2.0E-51 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 159 2.0E-51 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 2.0E-51 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.0E-51 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 2.0E-51 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 2.0E-51 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.0E-51 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 2.0E-51 T 11-10-2018 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 334 1.4E-57 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 Gene3D G3DSA:3.50.50.60 15 337 4.3E-89 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 Gene3D G3DSA:3.50.50.60 159 277 4.3E-89 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 PIRSF PIRSF000350 3 467 1.4E-65 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 SUPERFAMILY SSF55424 351 467 2.23E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 SUPERFAMILY SSF51905 13 343 8.95E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_17610 0f239af0c00e9c45a2df65dbe087e950 470 Gene3D G3DSA:3.30.390.30 351 469 1.1E-31 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AYJ52_14275 e0ae2aec563caeffdc4b175c1bd5bd72 133 SUPERFAMILY SSF46785 16 131 2.78E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14275 e0ae2aec563caeffdc4b175c1bd5bd72 133 Gene3D G3DSA:1.10.10.10 5 80 1.7E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14275 e0ae2aec563caeffdc4b175c1bd5bd72 133 Pfam PF01475 Ferric uptake regulator family 11 131 2.4E-15 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AYJ52_03195 c4e3f9c8369d293d4b2c9ec0a0299b43 153 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.1E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03195 c4e3f9c8369d293d4b2c9ec0a0299b43 153 Gene3D G3DSA:3.30.700.10 7 153 4.2E-47 T 11-10-2018 AYJ52_03195 c4e3f9c8369d293d4b2c9ec0a0299b43 153 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 8.7E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03195 c4e3f9c8369d293d4b2c9ec0a0299b43 153 Pfam PF00114 Pilin (bacterial filament) 35 151 3.7E-23 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AYJ52_03195 c4e3f9c8369d293d4b2c9ec0a0299b43 153 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_03195 c4e3f9c8369d293d4b2c9ec0a0299b43 153 SUPERFAMILY SSF54523 28 151 7.85E-34 T 11-10-2018 AYJ52_16015 488e30dfd662515969da06e067193124 344 Gene3D G3DSA:3.90.78.10 223 341 5.0E-39 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_16015 488e30dfd662515969da06e067193124 344 SUPERFAMILY SSF56176 9 196 1.03E-36 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AYJ52_16015 488e30dfd662515969da06e067193124 344 Pfam PF01565 FAD binding domain 24 146 4.6E-21 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AYJ52_16015 488e30dfd662515969da06e067193124 344 Gene3D G3DSA:3.30.43.10 1 71 2.2E-19 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AYJ52_16015 488e30dfd662515969da06e067193124 344 SUPERFAMILY SSF56194 208 335 3.53E-42 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_16015 488e30dfd662515969da06e067193124 344 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 329 1.5E-61 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_16015 488e30dfd662515969da06e067193124 344 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 211 332 5.6E-29 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_16015 488e30dfd662515969da06e067193124 344 Gene3D G3DSA:3.30.465.10 73 222 8.1E-52 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AYJ52_16015 488e30dfd662515969da06e067193124 344 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 344 72.425 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 SUPERFAMILY SSF50998 172 793 1.11E-139 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 Pfam PF13360 PQQ-like domain 201 390 3.7E-8 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 Pfam PF01011 PQQ enzyme repeat 737 772 1.3E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 Pfam PF01011 PQQ enzyme repeat 451 481 3.1E-9 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 417 438 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 172 200 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 SMART SM00564 352 393 0.018 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 SMART SM00564 438 471 76.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 SMART SM00564 730 763 7.7E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 SMART SM00564 494 526 380.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 SMART SM00564 224 255 0.0046 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 SMART SM00564 663 702 29.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ52_15165 1eeaeaf1b64b4711676a0fb60ba0d1ce 809 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 18 808 0.0 T 11-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 AYJ52_17205 c48880bf299e8a45d93bc837a4df7c34 334 PIRSF PIRSF000164 12 334 7.6E-94 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AYJ52_17205 c48880bf299e8a45d93bc837a4df7c34 334 Pfam PF01180 Dihydroorotate dehydrogenase 44 329 1.4E-86 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AYJ52_17205 c48880bf299e8a45d93bc837a4df7c34 334 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 77 96 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AYJ52_17205 c48880bf299e8a45d93bc837a4df7c34 334 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 331 2.0E-127 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AYJ52_17205 c48880bf299e8a45d93bc837a4df7c34 334 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AYJ52_17205 c48880bf299e8a45d93bc837a4df7c34 334 SUPERFAMILY SSF51395 1 331 3.33E-102 T 11-10-2018 AYJ52_17205 c48880bf299e8a45d93bc837a4df7c34 334 Gene3D G3DSA:3.20.20.70 2 332 9.8E-129 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_17205 c48880bf299e8a45d93bc837a4df7c34 334 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 333 50.469 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AYJ52_18420 e182a296fb0e6ef00d81a2c2b1d82f2d 567 Pfam PF05299 M61 glycyl aminopeptidase 268 384 1.2E-46 T 11-10-2018 IPR007963 Peptidase M61, catalytic domain AYJ52_18420 e182a296fb0e6ef00d81a2c2b1d82f2d 567 Gene3D G3DSA:2.30.42.10 469 567 3.4E-16 T 11-10-2018 AYJ52_18420 e182a296fb0e6ef00d81a2c2b1d82f2d 567 SUPERFAMILY SSF50156 462 542 2.76E-10 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AYJ52_18420 e182a296fb0e6ef00d81a2c2b1d82f2d 567 PIRSF PIRSF016493 1 567 2.3E-196 T 11-10-2018 IPR024191 Peptidase M61 AYJ52_18420 e182a296fb0e6ef00d81a2c2b1d82f2d 567 Gene3D G3DSA:1.10.390.60 175 445 1.4E-99 T 11-10-2018 AYJ52_18420 e182a296fb0e6ef00d81a2c2b1d82f2d 567 SMART SM00228 468 535 2.1E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_18420 e182a296fb0e6ef00d81a2c2b1d82f2d 567 SUPERFAMILY SSF55486 181 436 1.03E-13 T 11-10-2018 AYJ52_18420 e182a296fb0e6ef00d81a2c2b1d82f2d 567 Gene3D G3DSA:2.60.40.3650 1 172 3.6E-55 T 11-10-2018 AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 9.0E-66 T 11-10-2018 AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 SUPERFAMILY SSF51735 10 254 1.37E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 Gene3D G3DSA:3.40.50.720 2 254 2.0E-80 T 11-10-2018 AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 5.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 5.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 5.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 9.3E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 9.3E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 9.3E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 9.3E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 9.3E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14895 ef2987783be63328a65cc9176f391ac3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 9.3E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03855 991d04acef7ca4b9bf01de29680c2993 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_03855 991d04acef7ca4b9bf01de29680c2993 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_03855 991d04acef7ca4b9bf01de29680c2993 482 Pfam PF00171 Aldehyde dehydrogenase family 23 475 1.5E-160 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_03855 991d04acef7ca4b9bf01de29680c2993 482 Gene3D G3DSA:3.40.309.10 259 448 4.4E-173 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_03855 991d04acef7ca4b9bf01de29680c2993 482 Gene3D G3DSA:3.40.605.10 22 471 4.4E-173 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_03855 991d04acef7ca4b9bf01de29680c2993 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 28 474 2.7E-210 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AYJ52_03855 991d04acef7ca4b9bf01de29680c2993 482 SUPERFAMILY SSF53720 20 479 2.49E-162 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_11625 ad2ab039469bbfa8515c88f1982b633d 646 Gene3D G3DSA:3.30.1050.10 515 646 1.6E-41 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_11625 ad2ab039469bbfa8515c88f1982b633d 646 SUPERFAMILY SSF55718 522 646 4.71E-31 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_11625 ad2ab039469bbfa8515c88f1982b633d 646 Pfam PF14863 Alkyl sulfatase dimerisation 374 513 7.0E-60 T 11-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AYJ52_11625 ad2ab039469bbfa8515c88f1982b633d 646 Gene3D G3DSA:1.25.40.880 373 514 1.1E-61 T 11-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily AYJ52_11625 ad2ab039469bbfa8515c88f1982b633d 646 Gene3D G3DSA:3.60.15.30 16 372 1.3E-160 T 11-10-2018 AYJ52_11625 ad2ab039469bbfa8515c88f1982b633d 646 Pfam PF14864 Alkyl sulfatase C-terminal 521 646 7.7E-39 T 11-10-2018 IPR029229 Alkyl sulfatase, C-terminal AYJ52_11625 ad2ab039469bbfa8515c88f1982b633d 646 SUPERFAMILY SSF56281 21 515 2.41E-151 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_11625 ad2ab039469bbfa8515c88f1982b633d 646 SMART SM00849 112 337 4.4E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_11625 ad2ab039469bbfa8515c88f1982b633d 646 Pfam PF00753 Metallo-beta-lactamase superfamily 108 337 4.2E-38 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_05340 47baca5f8d2f816c176ff8918efda86a 176 PIRSF PIRSF000441 1 173 6.2E-37 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AYJ52_05340 47baca5f8d2f816c176ff8918efda86a 176 Gene3D G3DSA:2.160.10.10 64 173 6.8E-30 T 11-10-2018 AYJ52_05340 47baca5f8d2f816c176ff8918efda86a 176 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 119 147 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AYJ52_05340 47baca5f8d2f816c176ff8918efda86a 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 145 1.7E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_05340 47baca5f8d2f816c176ff8918efda86a 176 SUPERFAMILY SSF51161 36 164 6.65E-36 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_01625 bb0059da5fe1c91c7ebd83006f90a10b 113 SUPERFAMILY SSF110857 1 109 7.06E-19 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily AYJ52_01625 bb0059da5fe1c91c7ebd83006f90a10b 113 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 108 1.3E-14 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AYJ52_01625 bb0059da5fe1c91c7ebd83006f90a10b 113 Gene3D G3DSA:3.10.490.10 1 113 3.4E-20 T 11-10-2018 AYJ52_02690 fe22ffa817b8c301a79753625fc26fc5 212 Gene3D G3DSA:2.40.50.620 34 95 1.0E-15 T 11-10-2018 AYJ52_02690 fe22ffa817b8c301a79753625fc26fc5 212 Pfam PF00297 Ribosomal protein L3 57 185 2.0E-14 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02690 fe22ffa817b8c301a79753625fc26fc5 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 2.4E-86 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02690 fe22ffa817b8c301a79753625fc26fc5 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.694 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02690 fe22ffa817b8c301a79753625fc26fc5 212 SUPERFAMILY SSF50447 2 211 5.56E-78 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_02690 fe22ffa817b8c301a79753625fc26fc5 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site AYJ52_02690 fe22ffa817b8c301a79753625fc26fc5 212 Gene3D G3DSA:2.40.30.10 133 212 3.1E-14 T 11-10-2018 AYJ52_00345 97a4e06ae219a8527d556040f6bb8bbe 407 Gene3D G3DSA:1.10.443.10 213 399 5.6E-17 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AYJ52_00345 97a4e06ae219a8527d556040f6bb8bbe 407 Gene3D G3DSA:1.10.150.130 99 212 1.5E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AYJ52_00345 97a4e06ae219a8527d556040f6bb8bbe 407 Pfam PF13356 Arm DNA-binding domain 2 86 1.0E-17 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AYJ52_00345 97a4e06ae219a8527d556040f6bb8bbe 407 Gene3D G3DSA:3.30.160.390 1 98 1.1E-29 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AYJ52_00345 97a4e06ae219a8527d556040f6bb8bbe 407 SUPERFAMILY SSF56349 98 392 2.83E-46 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AYJ52_00345 97a4e06ae219a8527d556040f6bb8bbe 407 Pfam PF00589 Phage integrase family 213 381 2.5E-18 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 SUPERFAMILY SSF52540 200 372 3.4E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 Pfam PF01926 50S ribosome-binding GTPase 202 319 8.3E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 Hamap MF_00900 GTPase HflX [hflX]. 28 390 46.457 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 PIRSF PIRSF006809 5 421 6.8E-136 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 Gene3D G3DSA:3.40.50.300 199 366 4.4E-36 T 11-10-2018 AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 202 222 2.0E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 241 2.0E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 269 287 2.0E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 361 1.2E-144 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 Gene3D G3DSA:3.40.50.11060 18 139 1.1E-37 T 11-10-2018 AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 Pfam PF16360 GTP-binding GTPase Middle Region 115 194 6.4E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain AYJ52_02200 e6b6e53c1b5e23920e682ce552013799 447 Pfam PF13167 GTP-binding GTPase N-terminal 28 113 5.0E-32 T 11-10-2018 IPR025121 GTPase HflX, N-terminal AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Gene3D G3DSA:2.40.50.100 723 797 6.5E-31 T 11-10-2018 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 SUPERFAMILY SSF64484 11 1361 0.0 T 11-10-2018 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Gene3D G3DSA:3.90.1100.10 18 159 2.8E-52 T 11-10-2018 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Gene3D G3DSA:3.90.1100.10 451 632 4.1E-69 T 11-10-2018 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Gene3D G3DSA:3.90.1110.10 320 450 1.1E-32 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Pfam PF04560 RNA polymerase Rpb2, domain 7 1285 1359 4.8E-26 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Pfam PF04565 RNA polymerase Rpb2, domain 3 522 589 3.7E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Gene3D G3DSA:2.40.50.150 842 962 6.4E-44 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Gene3D G3DSA:2.40.270.10 1033 1261 3.4E-86 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1358 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Pfam PF10385 RNA polymerase beta subunit external 1 domain 600 665 5.4E-22 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 352 463 8.5E-15 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 153 225 1.1E-6 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Gene3D G3DSA:2.40.270.10 799 841 4.9E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Gene3D G3DSA:3.90.1100.10 657 722 4.1E-21 T 11-10-2018 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1361 12.308 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1084 1096 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Gene3D G3DSA:3.90.1110.10 160 254 8.5E-29 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Gene3D G3DSA:3.90.1800.10 1271 1324 7.8E-11 T 11-10-2018 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Pfam PF04563 RNA polymerase beta subunit 26 508 1.1E-40 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_06650 e15d535a6e3bd7e4ec0c376596e52d00 1362 Pfam PF00562 RNA polymerase Rpb2, domain 6 726 1283 2.7E-159 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AYJ52_05515 45a910df7f6bad73bb532a701e6cff8c 195 SUPERFAMILY SSF46689 3 63 3.01E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_05515 45a910df7f6bad73bb532a701e6cff8c 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 1.8E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05515 45a910df7f6bad73bb532a701e6cff8c 195 Gene3D G3DSA:1.10.357.10 2 195 7.4E-57 T 11-10-2018 AYJ52_05515 45a910df7f6bad73bb532a701e6cff8c 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.2E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05515 45a910df7f6bad73bb532a701e6cff8c 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.2E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05515 45a910df7f6bad73bb532a701e6cff8c 195 SUPERFAMILY SSF48498 77 193 2.14E-19 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_14315 7f92cf70ed3efdaacaa9bbc08353c3e8 350 Gene3D G3DSA:3.20.20.140 3 350 8.0E-108 T 11-10-2018 AYJ52_14315 7f92cf70ed3efdaacaa9bbc08353c3e8 350 ProSitePatterns PS00869 Renal dipeptidase active site. 131 153 - T 11-10-2018 IPR000180 Membrane dipeptidase, active site GO:0006508|GO:0008235|GO:0008239|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AYJ52_14315 7f92cf70ed3efdaacaa9bbc08353c3e8 350 SUPERFAMILY SSF51556 5 348 1.21E-85 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_14315 7f92cf70ed3efdaacaa9bbc08353c3e8 350 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 4 344 6.6E-90 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AYJ52_07540 89c069544e742a0acc64fe216c603e1b 259 Pfam PF05742 Transport and Golgi organisation 2 1 233 3.3E-56 T 11-10-2018 IPR008551 Transport and Golgi organisation protein 2 AYJ52_14940 fcc482043d7dcf1726678534597564b2 412 SUPERFAMILY SSF51395 11 344 3.97E-103 T 11-10-2018 AYJ52_14940 fcc482043d7dcf1726678534597564b2 412 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 14 341 5.3E-57 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AYJ52_14940 fcc482043d7dcf1726678534597564b2 412 Gene3D G3DSA:3.20.20.70 1 355 2.2E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_14725 642455835f7eb1af5ebdd320c73992c3 305 Gene3D G3DSA:1.10.10.10 12 102 1.2E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14725 642455835f7eb1af5ebdd320c73992c3 305 SUPERFAMILY SSF53850 100 299 2.53E-18 T 11-10-2018 AYJ52_14725 642455835f7eb1af5ebdd320c73992c3 305 SUPERFAMILY SSF46785 13 98 4.5E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14725 642455835f7eb1af5ebdd320c73992c3 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 5.7E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14725 642455835f7eb1af5ebdd320c73992c3 305 Pfam PF03466 LysR substrate binding domain 99 300 1.2E-16 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14725 642455835f7eb1af5ebdd320c73992c3 305 Gene3D G3DSA:3.40.190.290 103 304 1.3E-11 T 11-10-2018 AYJ52_04605 ce883a18678585203c61d59ac330a216 351 Gene3D G3DSA:3.10.180.10 1 147 1.6E-43 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_04605 ce883a18678585203c61d59ac330a216 351 SUPERFAMILY SSF54593 30 335 8.86E-75 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_04605 ce883a18678585203c61d59ac330a216 351 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 348 7.0E-115 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AYJ52_04605 ce883a18678585203c61d59ac330a216 351 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 153 270 8.8E-19 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AYJ52_04605 ce883a18678585203c61d59ac330a216 351 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 134 2.6E-48 T 11-10-2018 AYJ52_04605 ce883a18678585203c61d59ac330a216 351 PIRSF PIRSF009283 2 349 4.8E-108 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AYJ52_04605 ce883a18678585203c61d59ac330a216 351 Gene3D G3DSA:3.10.180.10 148 349 2.9E-68 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_02850 14552567999844dd2705fa7a8008a46e 607 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 472 599 6.5E-31 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AYJ52_02850 14552567999844dd2705fa7a8008a46e 607 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 27 3.9E-7 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AYJ52_02850 14552567999844dd2705fa7a8008a46e 607 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 7.6E-19 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_02850 14552567999844dd2705fa7a8008a46e 607 Gene3D G3DSA:1.20.140.10 288 464 3.2E-40 T 11-10-2018 AYJ52_02850 14552567999844dd2705fa7a8008a46e 607 Gene3D G3DSA:1.10.540.10 35 159 2.5E-21 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_02850 14552567999844dd2705fa7a8008a46e 607 SUPERFAMILY SSF47203 287 475 1.05E-44 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_02850 14552567999844dd2705fa7a8008a46e 607 Gene3D G3DSA:2.40.110.10 161 287 1.4E-29 T 11-10-2018 AYJ52_02850 14552567999844dd2705fa7a8008a46e 607 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 38 157 7.1E-18 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_02850 14552567999844dd2705fa7a8008a46e 607 SUPERFAMILY SSF56645 36 280 1.83E-61 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_02850 14552567999844dd2705fa7a8008a46e 607 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 457 2.4E-20 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_00690 896185ee33c33491d0e74f18f1f01045 189 SUPERFAMILY SSF51120 56 155 2.88E-5 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AYJ52_00690 896185ee33c33491d0e74f18f1f01045 189 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 96 188 4.8E-12 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AYJ52_07080 205c64e08a9a2081da7410a647f9d41f 112 Pfam PF01588 Putative tRNA binding domain 14 110 1.3E-13 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AYJ52_07080 205c64e08a9a2081da7410a647f9d41f 112 Gene3D G3DSA:2.40.50.140 1 112 1.2E-31 T 11-10-2018 AYJ52_07080 205c64e08a9a2081da7410a647f9d41f 112 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 111 1.6E-48 T 11-10-2018 IPR008231 Probable chaperone CsaA AYJ52_07080 205c64e08a9a2081da7410a647f9d41f 112 SUPERFAMILY SSF50249 4 111 9.71E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_11970 c8d92c83c8d1132239e5655ef2ae8c01 178 Pfam PF02525 Flavodoxin-like fold 3 157 5.4E-34 T 11-10-2018 IPR003680 Flavodoxin-like fold AYJ52_11970 c8d92c83c8d1132239e5655ef2ae8c01 178 SUPERFAMILY SSF52218 3 173 1.82E-38 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_11970 c8d92c83c8d1132239e5655ef2ae8c01 178 Gene3D G3DSA:3.40.50.360 1 175 1.7E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_06920 b833ee6074072945beea36ddaf3937c4 91 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 84 5.5E-17 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AYJ52_06920 b833ee6074072945beea36ddaf3937c4 91 PIRSF PIRSF028784 1 91 1.3E-26 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AYJ52_03090 d07b69381c35b05e1c47233b0c8524c6 324 SUPERFAMILY SSF53474 39 320 3.4E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_03090 d07b69381c35b05e1c47233b0c8524c6 324 Pfam PF00561 alpha/beta hydrolase fold 43 293 5.7E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_03090 d07b69381c35b05e1c47233b0c8524c6 324 Gene3D G3DSA:3.40.50.1820 36 324 6.1E-85 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_12930 13fb86dbfba83f7a7fcc26a33d68d353 139 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 137 3.4E-57 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AYJ52_12930 13fb86dbfba83f7a7fcc26a33d68d353 139 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 37.209 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AYJ52_12930 13fb86dbfba83f7a7fcc26a33d68d353 139 SUPERFAMILY SSF51316 4 138 6.8E-60 T 11-10-2018 IPR011057 Mss4-like superfamily AYJ52_12930 13fb86dbfba83f7a7fcc26a33d68d353 139 Pfam PF01641 SelR domain 10 128 1.2E-55 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AYJ52_12930 13fb86dbfba83f7a7fcc26a33d68d353 139 Gene3D G3DSA:2.170.150.20 2 139 3.6E-63 T 11-10-2018 AYJ52_16230 02c65c83bd54408328a25b2050846b23 336 Gene3D G3DSA:3.30.420.10 167 328 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_16230 02c65c83bd54408328a25b2050846b23 336 Pfam PF00665 Integrase core domain 175 280 2.7E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_16230 02c65c83bd54408328a25b2050846b23 336 SUPERFAMILY SSF53098 175 321 1.52E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_16230 02c65c83bd54408328a25b2050846b23 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_16175 02c65c83bd54408328a25b2050846b23 336 Gene3D G3DSA:3.30.420.10 167 328 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_16175 02c65c83bd54408328a25b2050846b23 336 Pfam PF00665 Integrase core domain 175 280 2.7E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_16175 02c65c83bd54408328a25b2050846b23 336 SUPERFAMILY SSF53098 175 321 1.52E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_16175 02c65c83bd54408328a25b2050846b23 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_19195 02c65c83bd54408328a25b2050846b23 336 Gene3D G3DSA:3.30.420.10 167 328 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_19195 02c65c83bd54408328a25b2050846b23 336 Pfam PF00665 Integrase core domain 175 280 2.7E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_19195 02c65c83bd54408328a25b2050846b23 336 SUPERFAMILY SSF53098 175 321 1.52E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_19195 02c65c83bd54408328a25b2050846b23 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_09100 02c65c83bd54408328a25b2050846b23 336 Gene3D G3DSA:3.30.420.10 167 328 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_09100 02c65c83bd54408328a25b2050846b23 336 Pfam PF00665 Integrase core domain 175 280 2.7E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_09100 02c65c83bd54408328a25b2050846b23 336 SUPERFAMILY SSF53098 175 321 1.52E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_09100 02c65c83bd54408328a25b2050846b23 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_19250 02c65c83bd54408328a25b2050846b23 336 Gene3D G3DSA:3.30.420.10 167 328 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_19250 02c65c83bd54408328a25b2050846b23 336 Pfam PF00665 Integrase core domain 175 280 2.7E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_19250 02c65c83bd54408328a25b2050846b23 336 SUPERFAMILY SSF53098 175 321 1.52E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_19250 02c65c83bd54408328a25b2050846b23 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_09060 02c65c83bd54408328a25b2050846b23 336 Gene3D G3DSA:3.30.420.10 167 328 1.6E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_09060 02c65c83bd54408328a25b2050846b23 336 Pfam PF00665 Integrase core domain 175 280 2.7E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_09060 02c65c83bd54408328a25b2050846b23 336 SUPERFAMILY SSF53098 175 321 1.52E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_09060 02c65c83bd54408328a25b2050846b23 336 Pfam PF13936 Helix-turn-helix domain 2 46 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_15500 d35fd4a6a9bad8e4de30ba0432592885 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_15500 d35fd4a6a9bad8e4de30ba0432592885 264 Pfam PF00557 Metallopeptidase family M24 15 245 2.7E-52 T 11-10-2018 IPR000994 Peptidase M24 AYJ52_15500 d35fd4a6a9bad8e4de30ba0432592885 264 SUPERFAMILY SSF55920 7 257 4.71E-90 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AYJ52_15500 d35fd4a6a9bad8e4de30ba0432592885 264 Gene3D G3DSA:3.90.230.10 4 256 3.4E-106 T 11-10-2018 AYJ52_15500 d35fd4a6a9bad8e4de30ba0432592885 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 252 6.0E-97 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_15500 d35fd4a6a9bad8e4de30ba0432592885 264 Hamap MF_01974 Methionine aminopeptidase [map]. 6 254 41.038 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_15500 d35fd4a6a9bad8e4de30ba0432592885 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 4.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_15500 d35fd4a6a9bad8e4de30ba0432592885 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 4.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_15500 d35fd4a6a9bad8e4de30ba0432592885 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 4.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_15500 d35fd4a6a9bad8e4de30ba0432592885 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 4.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AYJ52_17830 482036658efddcb976a967de81201527 531 Gene3D G3DSA:3.40.50.300 322 529 8.1E-64 T 11-10-2018 AYJ52_17830 482036658efddcb976a967de81201527 531 SUPERFAMILY SSF90123 22 315 3.66E-22 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_17830 482036658efddcb976a967de81201527 531 Pfam PF00664 ABC transporter transmembrane region 58 276 6.3E-7 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AYJ52_17830 482036658efddcb976a967de81201527 531 Pfam PF00005 ABC transporter 337 486 5.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_17830 482036658efddcb976a967de81201527 531 Gene3D G3DSA:1.20.1560.10 6 314 6.9E-15 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AYJ52_17830 482036658efddcb976a967de81201527 531 SUPERFAMILY SSF52540 317 525 1.13E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17830 482036658efddcb976a967de81201527 531 ProSitePatterns PS00211 ABC transporters family signature. 458 472 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_17830 482036658efddcb976a967de81201527 531 SMART SM00382 346 529 2.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_13970 5f073154c76fb5e267e71b3096bd2d1c 335 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 18 319 5.0E-112 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AYJ52_13970 5f073154c76fb5e267e71b3096bd2d1c 335 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 229 235 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AYJ52_13970 5f073154c76fb5e267e71b3096bd2d1c 335 PIRSF PIRSF037167 5 332 5.5E-136 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AYJ52_13970 5f073154c76fb5e267e71b3096bd2d1c 335 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 328 1.1E-76 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AYJ52_13970 5f073154c76fb5e267e71b3096bd2d1c 335 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 11 325 49.942 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AYJ52_13970 5f073154c76fb5e267e71b3096bd2d1c 335 SUPERFAMILY SSF53335 21 318 1.81E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_13970 5f073154c76fb5e267e71b3096bd2d1c 335 Pfam PF05175 Methyltransferase small domain 147 256 5.6E-18 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AYJ52_13970 5f073154c76fb5e267e71b3096bd2d1c 335 Gene3D G3DSA:3.40.50.150 109 307 2.5E-49 T 11-10-2018 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SUPERFAMILY SSF54106 710 756 9.16E-6 T 11-10-2018 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SUPERFAMILY SSF54106 576 620 2.22E-8 T 11-10-2018 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 152 180 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Gene3D G3DSA:3.10.350.10 576 619 6.3E-11 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Gene3D G3DSA:3.10.350.10 701 770 2.2E-8 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SMART SM00257 839 883 3.8E-10 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SMART SM00257 787 831 2.1E-14 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SMART SM00257 640 684 9.9E-11 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SMART SM00257 904 948 9.6E-12 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SMART SM00257 976 1020 5.5E-13 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SMART SM00257 577 621 2.4E-5 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SMART SM00257 711 756 1.2E-4 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SMART SM00257 1025 1069 1.5E-10 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SUPERFAMILY SSF53955 131 289 6.64E-42 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Gene3D G3DSA:1.10.530.10 129 277 5.5E-31 T 11-10-2018 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SUPERFAMILY SSF54106 975 1020 9.42E-9 T 11-10-2018 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SUPERFAMILY SSF54106 839 882 1.44E-7 T 11-10-2018 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Gene3D G3DSA:3.10.350.10 624 700 5.7E-13 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Gene3D G3DSA:3.10.350.10 835 890 5.6E-11 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Gene3D G3DSA:3.10.350.10 771 834 4.3E-15 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Gene3D G3DSA:3.10.350.10 1023 1071 1.6E-12 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Gene3D G3DSA:3.10.350.10 891 962 3.0E-14 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Gene3D G3DSA:3.10.350.10 963 1022 9.7E-14 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SUPERFAMILY SSF54106 788 831 2.35E-9 T 11-10-2018 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Pfam PF01464 Transglycosylase SLT domain 139 241 1.1E-23 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SUPERFAMILY SSF54106 1024 1069 1.7E-8 T 11-10-2018 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Pfam PF01476 LysM domain 641 683 3.1E-10 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Pfam PF01476 LysM domain 905 947 3.9E-11 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Pfam PF01476 LysM domain 840 882 1.4E-9 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Pfam PF01476 LysM domain 1026 1069 3.3E-10 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Pfam PF01476 LysM domain 788 831 1.2E-12 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Pfam PF01476 LysM domain 977 1020 1.6E-10 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Pfam PF01476 LysM domain 712 756 2.9E-6 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 Pfam PF01476 LysM domain 578 619 2.1E-9 T 11-10-2018 IPR018392 LysM domain AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SUPERFAMILY SSF54106 904 947 1.26E-8 T 11-10-2018 AYJ52_10695 1caf4693d1ac818d05f233b6f379c9b3 1071 SUPERFAMILY SSF54106 639 683 4.58E-8 T 11-10-2018 AYJ52_06840 6426d4095cccfff9ab783e3f2e6504a4 249 SUPERFAMILY SSF55315 3 78 5.89E-17 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AYJ52_06840 6426d4095cccfff9ab783e3f2e6504a4 249 SUPERFAMILY SSF75217 70 246 5.43E-46 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AYJ52_06840 6426d4095cccfff9ab783e3f2e6504a4 249 SMART SM00967 6 82 4.1E-16 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AYJ52_06840 6426d4095cccfff9ab783e3f2e6504a4 249 Pfam PF00588 SpoU rRNA Methylase family 98 240 2.0E-38 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AYJ52_06840 6426d4095cccfff9ab783e3f2e6504a4 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 246 1.2E-66 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AYJ52_06840 6426d4095cccfff9ab783e3f2e6504a4 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 247 38.229 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AYJ52_06840 6426d4095cccfff9ab783e3f2e6504a4 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 80 1.5E-17 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AYJ52_06840 6426d4095cccfff9ab783e3f2e6504a4 249 Gene3D G3DSA:3.30.1330.30 1 78 7.0E-24 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AYJ52_06840 6426d4095cccfff9ab783e3f2e6504a4 249 Gene3D G3DSA:3.40.1280.10 81 247 3.1E-53 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ52_13825 50eeed1e4b6c01ce2208d6c199416b8d 362 Pfam PF00793 DAHP synthetase I family 52 347 8.0E-95 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AYJ52_13825 50eeed1e4b6c01ce2208d6c199416b8d 362 PIRSF PIRSF001361 1 362 9.0E-159 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AYJ52_13825 50eeed1e4b6c01ce2208d6c199416b8d 362 Gene3D G3DSA:3.20.20.70 10 358 1.4E-152 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_13825 50eeed1e4b6c01ce2208d6c199416b8d 362 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 14 357 8.6E-153 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AYJ52_13825 50eeed1e4b6c01ce2208d6c199416b8d 362 SUPERFAMILY SSF51569 15 356 2.38E-133 T 11-10-2018 AYJ52_15800 38d0ac942535fc133088d2883cae68cf 122 SUPERFAMILY SSF75169 1 122 2.09E-29 T 11-10-2018 IPR027396 DsrEFH-like AYJ52_15800 38d0ac942535fc133088d2883cae68cf 122 Gene3D G3DSA:3.40.1260.10 1 122 2.0E-36 T 11-10-2018 IPR027396 DsrEFH-like AYJ52_15800 38d0ac942535fc133088d2883cae68cf 122 Pfam PF02635 DsrE/DsrF-like family 1 122 3.8E-22 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AYJ52_15800 38d0ac942535fc133088d2883cae68cf 122 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 122 1.7E-35 T 11-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AYJ52_06980 1ffe1e10e8a43cd4ac6f03f74a7a56e8 315 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 100 115 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AYJ52_06980 1ffe1e10e8a43cd4ac6f03f74a7a56e8 315 Pfam PF01209 ubiE/COQ5 methyltransferase family 83 314 1.6E-99 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AYJ52_06980 1ffe1e10e8a43cd4ac6f03f74a7a56e8 315 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 89 314 1.6E-83 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AYJ52_06980 1ffe1e10e8a43cd4ac6f03f74a7a56e8 315 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 222 236 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AYJ52_06980 1ffe1e10e8a43cd4ac6f03f74a7a56e8 315 SUPERFAMILY SSF53335 83 312 2.63E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_06980 1ffe1e10e8a43cd4ac6f03f74a7a56e8 315 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 80 314 38.586 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AYJ52_06980 1ffe1e10e8a43cd4ac6f03f74a7a56e8 315 Gene3D G3DSA:3.40.50.150 95 315 2.7E-75 T 11-10-2018 AYJ52_07435 d98bc054099414c1c4b1ecbc90ea0be1 659 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 270 1.1E-54 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AYJ52_07435 d98bc054099414c1c4b1ecbc90ea0be1 659 Gene3D G3DSA:3.40.50.300 10 272 7.8E-71 T 11-10-2018 AYJ52_07435 d98bc054099414c1c4b1ecbc90ea0be1 659 Gene3D G3DSA:1.10.10.160 109 190 7.8E-71 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AYJ52_07435 d98bc054099414c1c4b1ecbc90ea0be1 659 Pfam PF13361 UvrD-like helicase C-terminal domain 485 596 5.9E-18 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AYJ52_07435 d98bc054099414c1c4b1ecbc90ea0be1 659 SUPERFAMILY SSF52540 6 628 5.52E-122 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07435 d98bc054099414c1c4b1ecbc90ea0be1 659 Gene3D G3DSA:3.40.50.300 282 621 5.4E-66 T 11-10-2018 AYJ52_07435 d98bc054099414c1c4b1ecbc90ea0be1 659 Gene3D G3DSA:1.10.486.10 382 522 5.4E-66 T 11-10-2018 AYJ52_07435 d98bc054099414c1c4b1ecbc90ea0be1 659 Pfam PF13361 UvrD-like helicase C-terminal domain 278 411 9.0E-21 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AYJ52_07260 4a048a6a87fd554f9893dd7c44d3ba22 350 Pfam PF12706 Beta-lactamase superfamily domain 114 308 5.9E-35 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_07260 4a048a6a87fd554f9893dd7c44d3ba22 350 PIRSF PIRSF038896 2 350 3.3E-88 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AYJ52_07260 4a048a6a87fd554f9893dd7c44d3ba22 350 Gene3D G3DSA:3.60.15.10 59 350 1.3E-69 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_07260 4a048a6a87fd554f9893dd7c44d3ba22 350 SUPERFAMILY SSF56281 94 316 4.32E-28 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_06205 d0cee64011268bdf012c21180cd342bf 152 Pfam PF09278 MerR, DNA binding 44 108 5.6E-22 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AYJ52_06205 d0cee64011268bdf012c21180cd342bf 152 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_06205 d0cee64011268bdf012c21180cd342bf 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.8E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_06205 d0cee64011268bdf012c21180cd342bf 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.8E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_06205 d0cee64011268bdf012c21180cd342bf 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 7.8E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_06205 d0cee64011268bdf012c21180cd342bf 152 SUPERFAMILY SSF46955 1 126 3.44E-41 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_06205 d0cee64011268bdf012c21180cd342bf 152 Gene3D G3DSA:1.10.1660.10 1 125 7.2E-38 T 11-10-2018 AYJ52_06205 d0cee64011268bdf012c21180cd342bf 152 SMART SM00422 1 70 9.7E-32 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_06205 d0cee64011268bdf012c21180cd342bf 152 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.3E-51 T 11-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AYJ52_06205 d0cee64011268bdf012c21180cd342bf 152 Pfam PF00376 MerR family regulatory protein 2 39 1.0E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11335 670de46d0684ed0012b3213d59185e6d 397 TIGRFAM TIGR00843 benE: benzoate transporter 1 388 1.8E-188 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AYJ52_11335 670de46d0684ed0012b3213d59185e6d 397 Pfam PF03594 Benzoate membrane transport protein 11 387 8.7E-161 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AYJ52_16265 875ec8aa1a9e9a2b689582895b0461dc 729 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 712 729 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AYJ52_16265 875ec8aa1a9e9a2b689582895b0461dc 729 Gene3D G3DSA:2.40.170.20 191 729 1.7E-110 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_16265 875ec8aa1a9e9a2b689582895b0461dc 729 Gene3D G3DSA:2.170.130.10 63 189 3.5E-28 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_16265 875ec8aa1a9e9a2b689582895b0461dc 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 178 1.8E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_16265 875ec8aa1a9e9a2b689582895b0461dc 729 Pfam PF00593 TonB dependent receptor 258 727 2.3E-50 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_16265 875ec8aa1a9e9a2b689582895b0461dc 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 729 3.1E-86 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_16265 875ec8aa1a9e9a2b689582895b0461dc 729 SUPERFAMILY SSF56935 54 729 7.53E-113 T 11-10-2018 AYJ52_08885 a2e103771307a596a3e1aa7dbc9a4e6e 315 SUPERFAMILY SSF53850 92 310 4.52E-31 T 11-10-2018 AYJ52_08885 a2e103771307a596a3e1aa7dbc9a4e6e 315 Gene3D G3DSA:1.10.10.10 9 74 5.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_08885 a2e103771307a596a3e1aa7dbc9a4e6e 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08885 a2e103771307a596a3e1aa7dbc9a4e6e 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08885 a2e103771307a596a3e1aa7dbc9a4e6e 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08885 a2e103771307a596a3e1aa7dbc9a4e6e 315 Pfam PF03466 LysR substrate binding domain 91 306 9.5E-28 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_08885 a2e103771307a596a3e1aa7dbc9a4e6e 315 Gene3D G3DSA:3.40.190.10 85 190 4.4E-24 T 11-10-2018 AYJ52_08885 a2e103771307a596a3e1aa7dbc9a4e6e 315 Gene3D G3DSA:3.40.190.10 191 279 3.1E-21 T 11-10-2018 AYJ52_08885 a2e103771307a596a3e1aa7dbc9a4e6e 315 SUPERFAMILY SSF46785 3 83 6.15E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_08885 a2e103771307a596a3e1aa7dbc9a4e6e 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 9.0E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_07725 a1d19894661f6933c8fe1db926a64146 255 Gene3D G3DSA:1.25.40.10 19 246 3.1E-42 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_07725 a1d19894661f6933c8fe1db926a64146 255 Pfam PF13432 Tetratricopeptide repeat 78 123 3.6E-5 T 11-10-2018 AYJ52_07725 a1d19894661f6933c8fe1db926a64146 255 Pfam PF13432 Tetratricopeptide repeat 32 73 0.0053 T 11-10-2018 AYJ52_07725 a1d19894661f6933c8fe1db926a64146 255 Pfam PF13432 Tetratricopeptide repeat 138 194 3.3E-6 T 11-10-2018 AYJ52_07725 a1d19894661f6933c8fe1db926a64146 255 SUPERFAMILY SSF48452 28 195 4.55E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_07725 a1d19894661f6933c8fe1db926a64146 255 SMART SM00028 26 59 2.4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_07725 a1d19894661f6933c8fe1db926a64146 255 SMART SM00028 60 96 54.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_07725 a1d19894661f6933c8fe1db926a64146 255 SMART SM00028 133 166 5.5E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_07725 a1d19894661f6933c8fe1db926a64146 255 SMART SM00028 97 130 100.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_07725 a1d19894661f6933c8fe1db926a64146 255 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 3 235 1.6E-69 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW AYJ52_13760 49af337cf4dc27ea42193ebe650bb816 401 Gene3D G3DSA:2.40.110.10 130 238 7.5E-36 T 11-10-2018 AYJ52_13760 49af337cf4dc27ea42193ebe650bb816 401 Gene3D G3DSA:1.20.140.10 244 398 1.3E-30 T 11-10-2018 AYJ52_13760 49af337cf4dc27ea42193ebe650bb816 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 392 3.2E-39 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_13760 49af337cf4dc27ea42193ebe650bb816 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 6.2E-23 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_13760 49af337cf4dc27ea42193ebe650bb816 401 SUPERFAMILY SSF47203 241 395 2.9E-32 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_13760 49af337cf4dc27ea42193ebe650bb816 401 SUPERFAMILY SSF56645 6 254 7.07E-45 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_17420 5d0f483639450c9c490c4a8e829a4621 243 Gene3D G3DSA:2.40.30.70 2 145 2.9E-45 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily AYJ52_17420 5d0f483639450c9c490c4a8e829a4621 243 Gene3D G3DSA:3.30.2310.10 146 235 1.3E-12 T 11-10-2018 AYJ52_17420 5d0f483639450c9c490c4a8e829a4621 243 SUPERFAMILY SSF118196 3 234 4.32E-69 T 11-10-2018 IPR036413 YaeB-like superfamily AYJ52_17420 5d0f483639450c9c490c4a8e829a4621 243 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 4 153 3.9E-39 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AYJ52_17420 5d0f483639450c9c490c4a8e829a4621 243 Pfam PF01980 Uncharacterised protein family UPF0066 21 147 1.2E-39 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AYJ52_06100 69394a695716a543fd5f0ca7fece2354 174 SUPERFAMILY SSF50324 3 173 9.03E-67 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AYJ52_06100 69394a695716a543fd5f0ca7fece2354 174 Gene3D G3DSA:3.90.80.10 1 174 2.4E-71 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AYJ52_06100 69394a695716a543fd5f0ca7fece2354 174 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.719 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AYJ52_06100 69394a695716a543fd5f0ca7fece2354 174 Pfam PF00719 Inorganic pyrophosphatase 18 173 4.5E-52 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AYJ52_06100 69394a695716a543fd5f0ca7fece2354 174 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AYJ52_03960 6fdb436ef5cffdc066923591fcc4ec85 230 Pfam PF07885 Ion channel 131 215 1.5E-5 T 11-10-2018 IPR013099 Potassium channel domain AYJ52_03960 6fdb436ef5cffdc066923591fcc4ec85 230 Gene3D G3DSA:1.10.287.70 113 218 1.9E-10 T 11-10-2018 AYJ52_03960 6fdb436ef5cffdc066923591fcc4ec85 230 SUPERFAMILY SSF81324 129 216 6.8E-10 T 11-10-2018 AYJ52_19700 c54ced76f155be391ef0ce28ba7a463e 324 SUPERFAMILY SSF53098 7 292 5.99E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_19700 c54ced76f155be391ef0ce28ba7a463e 324 Pfam PF01609 Transposase DDE domain 53 277 2.9E-17 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AYJ52_09645 818ba0daec8f94465dfe37aaae6d5164 322 SUPERFAMILY SSF53474 27 316 9.49E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_09645 818ba0daec8f94465dfe37aaae6d5164 322 Pfam PF07859 alpha/beta hydrolase fold 87 291 1.5E-62 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AYJ52_09645 818ba0daec8f94465dfe37aaae6d5164 322 Gene3D G3DSA:3.40.50.1820 4 319 1.8E-80 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10650 ba7ecb226aec8b096f0de8625ee8ffb2 296 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 294 8.7E-108 T 11-10-2018 IPR017685 HTH-type transcriptional regulator ArgP AYJ52_10650 ba7ecb226aec8b096f0de8625ee8ffb2 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_10650 ba7ecb226aec8b096f0de8625ee8ffb2 296 SUPERFAMILY SSF53850 101 291 5.61E-17 T 11-10-2018 AYJ52_10650 ba7ecb226aec8b096f0de8625ee8ffb2 296 Gene3D G3DSA:3.40.190.290 88 296 9.4E-72 T 11-10-2018 AYJ52_10650 ba7ecb226aec8b096f0de8625ee8ffb2 296 Gene3D G3DSA:1.10.10.10 1 82 8.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10650 ba7ecb226aec8b096f0de8625ee8ffb2 296 Pfam PF03466 LysR substrate binding domain 103 290 6.2E-11 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_10650 ba7ecb226aec8b096f0de8625ee8ffb2 296 SUPERFAMILY SSF46785 1 107 7.78E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_06990 2d458414e6ce9ed5feac2fd0cdb13791 472 SUPERFAMILY SSF52540 280 470 1.52E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_06990 2d458414e6ce9ed5feac2fd0cdb13791 472 Gene3D G3DSA:3.40.50.300 3 225 3.5E-41 T 11-10-2018 AYJ52_06990 2d458414e6ce9ed5feac2fd0cdb13791 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 254 470 3.6E-78 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related AYJ52_06990 2d458414e6ce9ed5feac2fd0cdb13791 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 14 224 8.7E-24 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related AYJ52_06990 2d458414e6ce9ed5feac2fd0cdb13791 472 Gene3D G3DSA:3.40.50.300 227 472 5.3E-93 T 11-10-2018 AYJ52_18155 9b45171098dc9f98b97d4aeb163f36e6 133 SUPERFAMILY SSF54593 1 126 1.75E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_18155 9b45171098dc9f98b97d4aeb163f36e6 133 Gene3D G3DSA:3.10.180.10 1 133 7.8E-51 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_18155 9b45171098dc9f98b97d4aeb163f36e6 133 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AYJ52_18155 9b45171098dc9f98b97d4aeb163f36e6 133 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 130 4.7E-67 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AYJ52_18155 9b45171098dc9f98b97d4aeb163f36e6 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.2E-23 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AYJ52_18155 9b45171098dc9f98b97d4aeb163f36e6 133 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AYJ52_18595 a76dbf1778eea3634323c4c681150b21 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 238 1.7E-95 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AYJ52_18595 a76dbf1778eea3634323c4c681150b21 241 SUPERFAMILY SSF63892 3 238 1.28E-97 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AYJ52_18595 a76dbf1778eea3634323c4c681150b21 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 127.025 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AYJ52_18595 a76dbf1778eea3634323c4c681150b21 241 Gene3D G3DSA:3.20.20.70 1 241 2.0E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_18595 a76dbf1778eea3634323c4c681150b21 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 5 237 1.9E-101 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AYJ52_07155 57d9d873516bf7c16172dfe0730f2ab5 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 121 17.628 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AYJ52_07155 57d9d873516bf7c16172dfe0730f2ab5 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 2.7E-23 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AYJ52_07155 57d9d873516bf7c16172dfe0730f2ab5 126 TIGRFAM TIGR00494 crcB: protein CrcB 6 117 3.2E-31 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AYJ52_05120 16c5f652b161dde3150ac043597160ac 180 Pfam PF03358 NADPH-dependent FMN reductase 1 139 7.6E-31 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AYJ52_05120 16c5f652b161dde3150ac043597160ac 180 Gene3D G3DSA:3.40.50.360 1 176 5.6E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_05120 16c5f652b161dde3150ac043597160ac 180 SUPERFAMILY SSF52218 1 174 1.71E-33 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_02570 ec7013bc7af99935b03480892bc47b5e 208 SMART SM00363 98 162 4.3E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02570 ec7013bc7af99935b03480892bc47b5e 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 9.9E-32 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AYJ52_02570 ec7013bc7af99935b03480892bc47b5e 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.198 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AYJ52_02570 ec7013bc7af99935b03480892bc47b5e 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02570 ec7013bc7af99935b03480892bc47b5e 208 Pfam PF01479 S4 domain 99 145 5.7E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02570 ec7013bc7af99935b03480892bc47b5e 208 Gene3D G3DSA:3.10.290.10 97 193 7.8E-79 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AYJ52_02570 ec7013bc7af99935b03480892bc47b5e 208 SMART SM01390 3 97 2.1E-47 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AYJ52_02570 ec7013bc7af99935b03480892bc47b5e 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 1.3E-80 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AYJ52_02570 ec7013bc7af99935b03480892bc47b5e 208 Gene3D G3DSA:1.10.1050.10 6 208 7.8E-79 T 11-10-2018 AYJ52_02570 ec7013bc7af99935b03480892bc47b5e 208 SUPERFAMILY SSF55174 2 208 8.24E-68 T 11-10-2018 AYJ52_08655 51fc26301fa5c518b232e3b81e25efed 173 Pfam PF01740 STAS domain 12 102 4.1E-5 T 11-10-2018 IPR002645 STAS domain AYJ52_08655 51fc26301fa5c518b232e3b81e25efed 173 Gene3D G3DSA:3.30.750.24 4 108 4.8E-12 T 11-10-2018 IPR036513 STAS domain superfamily AYJ52_08655 51fc26301fa5c518b232e3b81e25efed 173 SUPERFAMILY SSF52091 8 105 4.91E-13 T 11-10-2018 IPR036513 STAS domain superfamily AYJ52_00185 8a0774f820fb4a0ed989a9626e46e111 281 Gene3D G3DSA:3.10.310.10 117 263 4.4E-111 T 11-10-2018 AYJ52_00185 8a0774f820fb4a0ed989a9626e46e111 281 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.375 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AYJ52_00185 8a0774f820fb4a0ed989a9626e46e111 281 SUPERFAMILY SSF54506 3 276 3.3E-57 T 11-10-2018 AYJ52_00185 8a0774f820fb4a0ed989a9626e46e111 281 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.1E-94 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AYJ52_00185 8a0774f820fb4a0ed989a9626e46e111 281 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AYJ52_00185 8a0774f820fb4a0ed989a9626e46e111 281 Pfam PF01678 Diaminopimelate epimerase 5 125 6.2E-33 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AYJ52_00185 8a0774f820fb4a0ed989a9626e46e111 281 Pfam PF01678 Diaminopimelate epimerase 155 268 7.2E-29 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AYJ52_00185 8a0774f820fb4a0ed989a9626e46e111 281 Gene3D G3DSA:3.10.310.10 4 272 4.4E-111 T 11-10-2018 AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 SUPERFAMILY SSF52029 184 376 1.24E-82 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 Gene3D G3DSA:3.50.7.10 173 379 8.9E-236 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.407 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.5E-96 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 Gene3D G3DSA:1.10.560.10 8 521 8.9E-236 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 SUPERFAMILY SSF48592 7 521 5.42E-77 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.4E-254 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 SUPERFAMILY SSF54849 139 203 2.52E-24 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AYJ52_19230 e4bfe23eda6b05eff10a1663f9a96968 546 Gene3D G3DSA:3.30.260.10 138 410 8.9E-236 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AYJ52_16665 92e4410330067fe618453c4401fb5633 152 Pfam PF13994 PgaD-like protein 26 148 2.2E-21 T 11-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 AYJ52_16665 92e4410330067fe618453c4401fb5633 152 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 40 149 7.0E-6 T 11-10-2018 AYJ52_16665 92e4410330067fe618453c4401fb5633 152 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 28 149 2.3E-21 T 11-10-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0043709 AYJ52_09775 24f550df365fcaa7dd33ebe5d118ca39 242 Gene3D G3DSA:2.160.20.70 131 241 7.5E-26 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 AYJ52_09775 24f550df365fcaa7dd33ebe5d118ca39 242 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 233 6.8E-38 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AYJ52_09775 24f550df365fcaa7dd33ebe5d118ca39 242 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 138 233 1.3E-25 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AYJ52_09775 24f550df365fcaa7dd33ebe5d118ca39 242 SUPERFAMILY SSF63848 136 232 3.4E-26 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 AYJ52_09775 24f550df365fcaa7dd33ebe5d118ca39 242 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 3 241 19.674 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AYJ52_00170 5f0916bfa0cac9208590b2c89e322168 308 Gene3D G3DSA:1.10.150.130 8 111 2.5E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AYJ52_00170 5f0916bfa0cac9208590b2c89e322168 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 21 91 7.2E-16 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AYJ52_00170 5f0916bfa0cac9208590b2c89e322168 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 305 51.418 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AYJ52_00170 5f0916bfa0cac9208590b2c89e322168 308 Pfam PF00589 Phage integrase family 131 290 2.4E-42 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AYJ52_00170 5f0916bfa0cac9208590b2c89e322168 308 SUPERFAMILY SSF56349 11 299 3.53E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AYJ52_00170 5f0916bfa0cac9208590b2c89e322168 308 Gene3D G3DSA:1.10.443.10 116 299 1.1E-57 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AYJ52_11205 0935eb3e92711911daf59570e92e6a7d 141 SUPERFAMILY SSF55729 2 136 8.48E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_11205 0935eb3e92711911daf59570e92e6a7d 141 Gene3D G3DSA:3.40.630.30 1 140 9.8E-31 T 11-10-2018 AYJ52_11205 0935eb3e92711911daf59570e92e6a7d 141 Pfam PF00583 Acetyltransferase (GNAT) family 31 128 9.7E-15 T 11-10-2018 IPR000182 GNAT domain AYJ52_01985 a9fe1e54ef82364d8243ae2dec662b58 308 Gene3D G3DSA:3.20.10.10 131 308 4.1E-54 T 11-10-2018 AYJ52_01985 a9fe1e54ef82364d8243ae2dec662b58 308 Gene3D G3DSA:3.30.470.10 2 130 2.3E-39 T 11-10-2018 AYJ52_01985 a9fe1e54ef82364d8243ae2dec662b58 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 307 8.9E-129 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AYJ52_01985 a9fe1e54ef82364d8243ae2dec662b58 308 SUPERFAMILY SSF56752 2 304 1.24E-102 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AYJ52_01985 a9fe1e54ef82364d8243ae2dec662b58 308 Pfam PF01063 Amino-transferase class IV 36 268 1.2E-52 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AYJ52_08475 4a3cacb2793281b32ee94a9bce26cb5e 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 1.5E-99 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AYJ52_08475 4a3cacb2793281b32ee94a9bce26cb5e 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 277 40.747 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AYJ52_08475 4a3cacb2793281b32ee94a9bce26cb5e 282 Gene3D G3DSA:3.30.1300.10 179 279 4.0E-29 T 11-10-2018 AYJ52_08475 4a3cacb2793281b32ee94a9bce26cb5e 282 SUPERFAMILY SSF52374 1 277 6.44E-106 T 11-10-2018 AYJ52_08475 4a3cacb2793281b32ee94a9bce26cb5e 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 68 1.1E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AYJ52_08475 4a3cacb2793281b32ee94a9bce26cb5e 282 Pfam PF02569 Pantoate-beta-alanine ligase 5 275 5.1E-105 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AYJ52_08475 4a3cacb2793281b32ee94a9bce26cb5e 282 Gene3D G3DSA:3.40.50.620 1 178 6.7E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_17790 123c20da2e1d35cd721c010c9c5fb0ba 627 Pfam PF13387 Domain of unknown function (DUF4105) 122 291 1.3E-55 T 11-10-2018 IPR025178 Domain of unknown function DUF4105 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 4 403 2.2E-228 T 11-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 PIRSF PIRSF000429 1 403 8.5E-134 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 SUPERFAMILY SSF53901 5 278 1.97E-83 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 SUPERFAMILY SSF53901 279 402 3.42E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 Pfam PF00108 Thiolase, N-terminal domain 7 270 1.3E-80 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 401 5.9E-141 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 Pfam PF02803 Thiolase, C-terminal domain 278 402 1.2E-46 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 Gene3D G3DSA:3.40.47.10 143 400 8.4E-160 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 Gene3D G3DSA:3.40.47.10 8 284 8.4E-160 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_15215 4d530b23f408b4e9e1d955603ddc368c 403 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AYJ52_12795 7a659a6877f399f97a88143c6571fb7d 340 Gene3D G3DSA:1.10.8.450 252 286 2.0E-54 T 11-10-2018 AYJ52_12795 7a659a6877f399f97a88143c6571fb7d 340 Gene3D G3DSA:3.40.190.10 43 251 2.0E-54 T 11-10-2018 AYJ52_12795 7a659a6877f399f97a88143c6571fb7d 340 SUPERFAMILY SSF53850 38 262 1.43E-44 T 11-10-2018 AYJ52_12795 7a659a6877f399f97a88143c6571fb7d 340 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 40 268 2.9E-20 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 AYJ52_12795 7a659a6877f399f97a88143c6571fb7d 340 SMART SM00062 41 265 3.6E-13 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_12795 7a659a6877f399f97a88143c6571fb7d 340 Gene3D G3DSA:3.40.190.10 119 216 2.0E-54 T 11-10-2018 AYJ52_12795 7a659a6877f399f97a88143c6571fb7d 340 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 42 338 1.2E-121 T 11-10-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 Gene3D G3DSA:1.10.540.10 7 119 2.1E-133 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 378 9.6E-49 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 PIRSF PIRSF016578 109 364 3.2E-13 T 11-10-2018 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 PIRSF PIRSF016578 4 86 5.3E-7 T 11-10-2018 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 SUPERFAMILY SSF47203 229 381 1.03E-55 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 SUPERFAMILY SSF56645 9 243 4.58E-80 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 Gene3D G3DSA:1.20.140.10 230 375 2.1E-133 T 11-10-2018 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 117 6.4E-30 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 3.3E-29 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_12365 e1f2e2abaa56514ff1d765aa598b0f15 384 Gene3D G3DSA:2.40.110.10 120 229 2.1E-133 T 11-10-2018 AYJ52_04085 0917665f149663bdb157cf2332f23336 191 Pfam PF01169 Uncharacterized protein family UPF0016 107 181 5.6E-24 T 11-10-2018 IPR001727 Gdt1 family AYJ52_04085 0917665f149663bdb157cf2332f23336 191 Pfam PF01169 Uncharacterized protein family UPF0016 6 80 5.5E-19 T 11-10-2018 IPR001727 Gdt1 family AYJ52_06330 672b335304bdc8485e3bdf686ecf0bd4 465 Pfam PF00909 Ammonium Transporter Family 71 462 1.2E-116 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AYJ52_06330 672b335304bdc8485e3bdf686ecf0bd4 465 PRINTS PR00342 Rhesus blood group protein signature 259 277 7.5E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AYJ52_06330 672b335304bdc8485e3bdf686ecf0bd4 465 PRINTS PR00342 Rhesus blood group protein signature 163 179 7.5E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AYJ52_06330 672b335304bdc8485e3bdf686ecf0bd4 465 PRINTS PR00342 Rhesus blood group protein signature 290 312 7.5E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AYJ52_06330 672b335304bdc8485e3bdf686ecf0bd4 465 PRINTS PR00342 Rhesus blood group protein signature 345 363 7.5E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AYJ52_06330 672b335304bdc8485e3bdf686ecf0bd4 465 TIGRFAM TIGR00836 amt: ammonium transporter 68 462 9.1E-133 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AYJ52_06330 672b335304bdc8485e3bdf686ecf0bd4 465 Gene3D G3DSA:1.10.3430.10 43 465 1.1E-139 T 11-10-2018 IPR029020 Ammonium/urea transporter AYJ52_06330 672b335304bdc8485e3bdf686ecf0bd4 465 SUPERFAMILY SSF111352 64 446 2.35E-129 T 11-10-2018 AYJ52_06330 672b335304bdc8485e3bdf686ecf0bd4 465 ProSitePatterns PS01219 Ammonium transporters signature. 220 245 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AYJ52_13745 321ee277c8acb7f28e2ce4688c219622 621 SUPERFAMILY SSF109998 40 290 2.59E-22 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AYJ52_13745 321ee277c8acb7f28e2ce4688c219622 621 Pfam PF13624 SurA N-terminal domain 1 158 2.2E-35 T 11-10-2018 AYJ52_13745 321ee277c8acb7f28e2ce4688c219622 621 Gene3D G3DSA:3.10.50.40 258 363 1.3E-26 T 11-10-2018 AYJ52_13745 321ee277c8acb7f28e2ce4688c219622 621 Pfam PF13616 PPIC-type PPIASE domain 253 362 1.8E-28 T 11-10-2018 AYJ52_13745 321ee277c8acb7f28e2ce4688c219622 621 SUPERFAMILY SSF54534 261 358 4.64E-24 T 11-10-2018 AYJ52_13020 afb7f8617d5811d5051718a61ac305a6 356 SMART SM00930 274 349 8.4E-5 T 11-10-2018 IPR018449 NIL domain AYJ52_13020 afb7f8617d5811d5051718a61ac305a6 356 Gene3D G3DSA:3.40.50.300 9 257 4.8E-74 T 11-10-2018 AYJ52_13020 afb7f8617d5811d5051718a61ac305a6 356 SUPERFAMILY SSF52540 15 252 1.54E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13020 afb7f8617d5811d5051718a61ac305a6 356 SUPERFAMILY SSF55021 267 352 7.1E-11 T 11-10-2018 AYJ52_13020 afb7f8617d5811d5051718a61ac305a6 356 Pfam PF00005 ABC transporter 34 182 1.1E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_13020 afb7f8617d5811d5051718a61ac305a6 356 SMART SM00382 43 231 3.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_13020 afb7f8617d5811d5051718a61ac305a6 356 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_13020 afb7f8617d5811d5051718a61ac305a6 356 Gene3D G3DSA:3.30.70.260 262 356 5.8E-9 T 11-10-2018 AYJ52_13020 afb7f8617d5811d5051718a61ac305a6 356 Pfam PF09383 NIL domain 277 327 5.2E-8 T 11-10-2018 IPR018449 NIL domain AYJ52_08540 23c366cce8e51b0bd3dc42994ae2e7f2 185 Pfam PF08719 Domain of unknown function (DUF1768) 24 182 2.7E-54 T 11-10-2018 IPR012816 NADAR AYJ52_08540 23c366cce8e51b0bd3dc42994ae2e7f2 185 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 23 182 1.5E-54 T 11-10-2018 IPR012816 NADAR AYJ52_08540 23c366cce8e51b0bd3dc42994ae2e7f2 185 SUPERFAMILY SSF143990 14 184 2.35E-55 T 11-10-2018 IPR037238 YbiA-like superfamily AYJ52_08540 23c366cce8e51b0bd3dc42994ae2e7f2 185 Gene3D G3DSA:1.10.357.40 11 185 6.7E-45 T 11-10-2018 IPR037238 YbiA-like superfamily AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 Gene3D G3DSA:1.10.3860.10 3 420 1.6E-125 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 SUPERFAMILY SSF118215 12 413 1.57E-107 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 Pfam PF00375 Sodium:dicarboxylate symporter family 12 412 3.4E-119 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 PRINTS PR00173 Glutamate-aspartate symporter signature 238 257 5.6E-54 T 11-10-2018 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 PRINTS PR00173 Glutamate-aspartate symporter signature 367 387 5.6E-54 T 11-10-2018 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 5.6E-54 T 11-10-2018 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 5.6E-54 T 11-10-2018 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 5.6E-54 T 11-10-2018 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 PRINTS PR00173 Glutamate-aspartate symporter signature 340 359 5.6E-54 T 11-10-2018 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 5.6E-54 T 11-10-2018 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 PRINTS PR00173 Glutamate-aspartate symporter signature 305 331 5.6E-54 T 11-10-2018 AYJ52_02735 05c288f5ec9a59934f9095d846e4b565 421 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 5.6E-54 T 11-10-2018 AYJ52_02050 bbad8f22c5aa94daeb66c51344050f7b 235 Pfam PF04002 RadC-like JAB domain 107 225 1.2E-36 T 11-10-2018 IPR025657 RadC-like JAB domain AYJ52_02050 bbad8f22c5aa94daeb66c51344050f7b 235 Gene3D G3DSA:1.10.150.20 46 89 5.1E-6 T 11-10-2018 AYJ52_02050 bbad8f22c5aa94daeb66c51344050f7b 235 SUPERFAMILY SSF47781 17 91 1.46E-10 T 11-10-2018 IPR010994 RuvA domain 2-like AYJ52_02050 bbad8f22c5aa94daeb66c51344050f7b 235 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 227 7.8E-63 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AYJ52_02050 bbad8f22c5aa94daeb66c51344050f7b 235 SUPERFAMILY SSF102712 154 197 3.4E-5 T 11-10-2018 AYJ52_02050 bbad8f22c5aa94daeb66c51344050f7b 235 Gene3D G3DSA:3.40.140.10 102 227 5.3E-37 T 11-10-2018 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 20 41 1.0E-9 T 11-10-2018 IPR019626 Stress-induced protein, KGG, repeat AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 108 120 450.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 322 334 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 280 292 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 405 417 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 238 250 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 217 229 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 152 164 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 174 186 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 196 208 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 131 143 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 301 313 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 259 271 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 384 396 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 363 375 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_12535 857c62ab2460bf0961041a1d985ca174 438 SMART SM00384 343 355 57.0 T 11-10-2018 IPR017956 AT hook, DNA-binding motif GO:0003677 AYJ52_06450 180ac08357390c9d287da650e1440475 448 SUPERFAMILY SSF53623 96 300 5.34E-53 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_06450 180ac08357390c9d287da650e1440475 448 Pfam PF08245 Mur ligase middle domain 110 282 2.2E-26 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AYJ52_06450 180ac08357390c9d287da650e1440475 448 SUPERFAMILY SSF53244 302 447 4.88E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_06450 180ac08357390c9d287da650e1440475 448 SUPERFAMILY SSF51984 10 94 6.02E-18 T 11-10-2018 AYJ52_06450 180ac08357390c9d287da650e1440475 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 383 4.0E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AYJ52_06450 180ac08357390c9d287da650e1440475 448 Gene3D G3DSA:3.40.50.720 8 93 3.1E-22 T 11-10-2018 AYJ52_06450 180ac08357390c9d287da650e1440475 448 Gene3D G3DSA:3.40.1190.10 94 302 4.6E-63 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AYJ52_06450 180ac08357390c9d287da650e1440475 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 447 33.55 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_06450 180ac08357390c9d287da650e1440475 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 445 1.1E-119 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_06450 180ac08357390c9d287da650e1440475 448 Gene3D G3DSA:3.90.190.20 303 443 1.0E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AYJ52_08980 eae179b709e49cc90c25b05b4525d693 335 SUPERFAMILY SSF46689 282 331 2.28E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_08980 eae179b709e49cc90c25b05b4525d693 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 203 2.5E-37 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_08980 eae179b709e49cc90c25b05b4525d693 335 Gene3D G3DSA:1.10.10.60 225 332 2.3E-23 T 11-10-2018 AYJ52_08980 eae179b709e49cc90c25b05b4525d693 335 Pfam PF12833 Helix-turn-helix domain 253 329 1.8E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_08980 eae179b709e49cc90c25b05b4525d693 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 3.9E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_08980 eae179b709e49cc90c25b05b4525d693 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 3.9E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_08980 eae179b709e49cc90c25b05b4525d693 335 SMART SM00342 246 328 8.7E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_18660 5a63e88e8cd347e9a6adc9f24a5ba047 356 Pfam PF02618 YceG-like family 62 347 7.8E-77 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AYJ52_18660 5a63e88e8cd347e9a6adc9f24a5ba047 356 Gene3D G3DSA:3.30.160.60 321 356 1.2E-15 T 11-10-2018 AYJ52_18660 5a63e88e8cd347e9a6adc9f24a5ba047 356 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 28 353 31.968 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AYJ52_18660 5a63e88e8cd347e9a6adc9f24a5ba047 356 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 28 355 1.5E-84 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AYJ52_18660 5a63e88e8cd347e9a6adc9f24a5ba047 356 Gene3D G3DSA:1.10.8.1150 57 130 1.9E-6 T 11-10-2018 AYJ52_04760 2f88f878ba8f041770ab443f3a92ed9a 368 SUPERFAMILY SSF111369 48 274 1.26E-20 T 11-10-2018 AYJ52_04760 2f88f878ba8f041770ab443f3a92ed9a 368 Gene3D G3DSA:2.40.420.20 280 350 3.9E-73 T 11-10-2018 AYJ52_04760 2f88f878ba8f041770ab443f3a92ed9a 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 264 4.0E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_04760 2f88f878ba8f041770ab443f3a92ed9a 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 351 7.8E-67 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_04760 2f88f878ba8f041770ab443f3a92ed9a 368 Gene3D G3DSA:2.40.30.170 47 279 3.9E-73 T 11-10-2018 AYJ52_04760 2f88f878ba8f041770ab443f3a92ed9a 368 Gene3D G3DSA:2.40.50.100 58 204 3.9E-73 T 11-10-2018 AYJ52_04760 2f88f878ba8f041770ab443f3a92ed9a 368 Gene3D G3DSA:1.10.287.470 92 164 3.9E-73 T 11-10-2018 AYJ52_08310 716b666bdf2f7fe0957d3a79a45262cb 434 Gene3D G3DSA:1.20.1600.10 26 425 4.6E-46 T 11-10-2018 AYJ52_08310 716b666bdf2f7fe0957d3a79a45262cb 434 Pfam PF02321 Outer membrane efflux protein 35 218 3.0E-14 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_08310 716b666bdf2f7fe0957d3a79a45262cb 434 Pfam PF02321 Outer membrane efflux protein 251 421 7.9E-15 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_08310 716b666bdf2f7fe0957d3a79a45262cb 434 SUPERFAMILY SSF56954 9 422 5.62E-55 T 11-10-2018 AYJ52_15305 33a4aa9a447c87602d74a489acd3ce8a 135 SUPERFAMILY SSF54427 6 114 2.66E-21 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_15305 33a4aa9a447c87602d74a489acd3ce8a 135 Pfam PF12680 SnoaL-like domain 11 106 2.9E-10 T 11-10-2018 IPR037401 SnoaL-like domain AYJ52_15305 33a4aa9a447c87602d74a489acd3ce8a 135 Gene3D G3DSA:3.10.450.50 2 133 7.0E-45 T 11-10-2018 AYJ52_07465 0085f46dd607ca4be0ac10cf06490dfb 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 6.9E-25 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_07465 0085f46dd607ca4be0ac10cf06490dfb 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_07465 0085f46dd607ca4be0ac10cf06490dfb 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.385 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_07465 0085f46dd607ca4be0ac10cf06490dfb 51 Pfam PF00471 Ribosomal protein L33 4 49 6.1E-18 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_07465 0085f46dd607ca4be0ac10cf06490dfb 51 Gene3D G3DSA:2.20.28.120 1 51 2.9E-28 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_07465 0085f46dd607ca4be0ac10cf06490dfb 51 SUPERFAMILY SSF57829 1 49 1.28E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AYJ52_10700 8c8ca16e66ead8e64fcacdc1e8e4f2a2 611 Gene3D G3DSA:3.40.190.10 31 595 3.4E-213 T 11-10-2018 AYJ52_10700 8c8ca16e66ead8e64fcacdc1e8e4f2a2 611 PIRSF PIRSF002741 1 600 9.3E-90 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AYJ52_10700 8c8ca16e66ead8e64fcacdc1e8e4f2a2 611 Gene3D G3DSA:3.10.105.10 314 575 3.4E-213 T 11-10-2018 AYJ52_10700 8c8ca16e66ead8e64fcacdc1e8e4f2a2 611 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 510 2.9E-70 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AYJ52_10700 8c8ca16e66ead8e64fcacdc1e8e4f2a2 611 SUPERFAMILY SSF53850 51 597 1.81E-104 T 11-10-2018 AYJ52_17470 2bdc9aa5cd548e5493034be81a9abb12 261 SMART SM00062 30 259 5.6E-70 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_17470 2bdc9aa5cd548e5493034be81a9abb12 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 257 3.0E-62 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_17470 2bdc9aa5cd548e5493034be81a9abb12 261 SUPERFAMILY SSF53850 5 259 7.76E-68 T 11-10-2018 AYJ52_17470 2bdc9aa5cd548e5493034be81a9abb12 261 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 53 66 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AYJ52_17470 2bdc9aa5cd548e5493034be81a9abb12 261 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 12 256 1.6E-82 T 11-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AYJ52_17470 2bdc9aa5cd548e5493034be81a9abb12 261 Gene3D G3DSA:3.40.190.10 32 255 9.5E-81 T 11-10-2018 AYJ52_17470 2bdc9aa5cd548e5493034be81a9abb12 261 Gene3D G3DSA:3.40.190.10 116 216 9.5E-81 T 11-10-2018 AYJ52_16575 0fec7d9822f7bd2373c32114d4f92b57 145 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 10 111 4.9E-12 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AYJ52_16575 0fec7d9822f7bd2373c32114d4f92b57 145 SUPERFAMILY SSF55083 8 128 6.28E-15 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AYJ52_16575 0fec7d9822f7bd2373c32114d4f92b57 145 Gene3D G3DSA:3.30.70.560 6 127 1.4E-11 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AYJ52_01730 71d3608370eb7077d9d290015746e4a4 286 Pfam PF01734 Patatin-like phospholipase 9 171 1.7E-16 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AYJ52_01730 71d3608370eb7077d9d290015746e4a4 286 SUPERFAMILY SSF52151 6 280 2.62E-34 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AYJ52_01730 71d3608370eb7077d9d290015746e4a4 286 Gene3D G3DSA:3.40.1090.10 2 109 7.1E-11 T 11-10-2018 AYJ52_12300 30bd84d7c71fe10bf8ff85a407805315 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 7 259 5.5E-105 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AYJ52_12300 30bd84d7c71fe10bf8ff85a407805315 271 Gene3D G3DSA:3.40.50.1000 10 271 1.4E-108 T 11-10-2018 IPR023214 HAD superfamily AYJ52_12300 30bd84d7c71fe10bf8ff85a407805315 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 121.552 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AYJ52_12300 30bd84d7c71fe10bf8ff85a407805315 271 SUPERFAMILY SSF56784 8 261 1.86E-52 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_12300 30bd84d7c71fe10bf8ff85a407805315 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 205 3.1E-8 T 11-10-2018 AYJ52_12300 30bd84d7c71fe10bf8ff85a407805315 271 Gene3D G3DSA:1.10.150.240 26 103 1.4E-108 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ52_12300 30bd84d7c71fe10bf8ff85a407805315 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 153 205 2.7E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AYJ52_11085 d0f8182bafb3dbf97288605ee67bc22d 291 Pfam PF04072 Leucine carboxyl methyltransferase 11 193 9.0E-40 T 11-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 AYJ52_11085 d0f8182bafb3dbf97288605ee67bc22d 291 SUPERFAMILY SSF53335 7 287 5.59E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_11085 d0f8182bafb3dbf97288605ee67bc22d 291 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 8 270 3.5E-49 T 11-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 AYJ52_11085 d0f8182bafb3dbf97288605ee67bc22d 291 Gene3D G3DSA:3.40.50.150 2 286 2.5E-47 T 11-10-2018 AYJ52_17530 2b188308905aa56935d7ceef623c6d07 270 SUPERFAMILY SSF55620 171 253 2.0E-10 T 11-10-2018 AYJ52_17530 2b188308905aa56935d7ceef623c6d07 270 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 270 120.947 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AYJ52_17530 2b188308905aa56935d7ceef623c6d07 270 PIRSF PIRSF004750 1 270 3.9E-110 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AYJ52_17530 2b188308905aa56935d7ceef623c6d07 270 Gene3D G3DSA:3.30.1130.10 14 130 9.1E-40 T 11-10-2018 AYJ52_17530 2b188308905aa56935d7ceef623c6d07 270 TIGRFAM TIGR03138 QueF: queuine synthase 3 270 6.1E-114 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AYJ52_17530 2b188308905aa56935d7ceef623c6d07 270 Pfam PF14489 QueF-like protein 183 254 8.8E-21 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AYJ52_17530 2b188308905aa56935d7ceef623c6d07 270 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 14 122 1.6E-37 T 11-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AYJ52_17530 2b188308905aa56935d7ceef623c6d07 270 Gene3D G3DSA:3.30.1130.10 132 270 2.0E-55 T 11-10-2018 AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 249 1.8E-65 T 11-10-2018 AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 6.6E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.6E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.6E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 Gene3D G3DSA:3.40.50.720 1 250 2.6E-77 T 11-10-2018 AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 SUPERFAMILY SSF51735 2 250 3.2E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.1E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.1E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.1E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.1E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.1E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14890 de6557b7db00066f29891af19ec4b2ed 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.1E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03040 0d64fd08d2655a2995e89b590524efec 104 Gene3D G3DSA:3.30.70.100 1 104 1.7E-30 T 11-10-2018 AYJ52_03040 0d64fd08d2655a2995e89b590524efec 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 86 1.9E-21 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AYJ52_03040 0d64fd08d2655a2995e89b590524efec 104 SUPERFAMILY SSF54909 1 99 2.97E-27 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_14270 cc98f333d634e38303d551ab93dad088 220 Pfam PF00857 Isochorismatase family 32 205 3.4E-38 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AYJ52_14270 cc98f333d634e38303d551ab93dad088 220 PIRSF PIRSF001111 1 220 1.4E-105 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_14270 cc98f333d634e38303d551ab93dad088 220 SUPERFAMILY SSF52499 1 212 2.75E-65 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_14270 cc98f333d634e38303d551ab93dad088 220 Gene3D G3DSA:3.40.50.850 1 211 5.2E-75 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_14270 cc98f333d634e38303d551ab93dad088 220 PRINTS PR01398 Isochorismatase signature 63 80 4.8E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_14270 cc98f333d634e38303d551ab93dad088 220 PRINTS PR01398 Isochorismatase signature 168 186 4.8E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_14270 cc98f333d634e38303d551ab93dad088 220 PRINTS PR01398 Isochorismatase signature 112 134 4.8E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_14270 cc98f333d634e38303d551ab93dad088 220 PRINTS PR01398 Isochorismatase signature 2 14 4.8E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_14270 cc98f333d634e38303d551ab93dad088 220 PRINTS PR01398 Isochorismatase signature 80 99 4.8E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_14270 cc98f333d634e38303d551ab93dad088 220 PRINTS PR01398 Isochorismatase signature 186 203 4.8E-46 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 Gene3D G3DSA:3.30.930.10 3 216 5.0E-113 T 11-10-2018 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.3E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 SUPERFAMILY SSF55681 10 292 2.29E-136 T 11-10-2018 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 293 61.18 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 291 1.4E-153 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 299 1.8E-162 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AYJ52_02895 d7e449c8b657a27a8d42e79fef667c4f 325 Gene3D G3DSA:1.20.58.180 217 298 1.7E-34 T 11-10-2018 AYJ52_11130 fc088ad0bc66ecae2830db8eb3c69a71 185 Pfam PF01292 Prokaryotic cytochrome b561 9 181 2.9E-26 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AYJ52_11130 fc088ad0bc66ecae2830db8eb3c69a71 185 Gene3D G3DSA:1.20.950.20 3 90 1.7E-5 T 11-10-2018 AYJ52_11130 fc088ad0bc66ecae2830db8eb3c69a71 185 SUPERFAMILY SSF81342 6 181 4.63E-33 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AYJ52_03870 51aa125b45404a7dfaea71f84458e4c5 480 PIRSF PIRSF006060 2 479 2.8E-71 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_03870 51aa125b45404a7dfaea71f84458e4c5 480 Pfam PF00324 Amino acid permease 24 433 7.8E-105 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_03870 51aa125b45404a7dfaea71f84458e4c5 480 Gene3D G3DSA:1.20.1740.10 16 469 2.4E-62 T 11-10-2018 AYJ52_03870 51aa125b45404a7dfaea71f84458e4c5 480 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_09595 3128e0ea55ca4da691883de16a42b7bb 183 SUPERFAMILY SSF52218 7 182 4.32E-47 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_09595 3128e0ea55ca4da691883de16a42b7bb 183 ProSitePatterns PS00201 Flavodoxin signature. 10 26 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AYJ52_09595 3128e0ea55ca4da691883de16a42b7bb 183 Gene3D G3DSA:3.40.50.360 4 183 1.6E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_09595 3128e0ea55ca4da691883de16a42b7bb 183 Pfam PF03358 NADPH-dependent FMN reductase 49 121 2.4E-14 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AYJ52_14175 8d1e42052374a6923cb7fb966b0fc8df 474 Pfam PF02447 GntP family permease 65 467 3.8E-5 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AYJ52_06525 eb868bf6dcc4a5933d68c18c87574ef4 246 Pfam PF04397 LytTr DNA-binding domain 150 243 5.4E-23 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AYJ52_06525 eb868bf6dcc4a5933d68c18c87574ef4 246 Gene3D G3DSA:3.40.50.2300 1 125 3.9E-40 T 11-10-2018 AYJ52_06525 eb868bf6dcc4a5933d68c18c87574ef4 246 SMART SM00850 147 244 8.8E-28 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AYJ52_06525 eb868bf6dcc4a5933d68c18c87574ef4 246 SUPERFAMILY SSF52172 1 166 9.53E-38 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_06525 eb868bf6dcc4a5933d68c18c87574ef4 246 Pfam PF00072 Response regulator receiver domain 3 112 4.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_06525 eb868bf6dcc4a5933d68c18c87574ef4 246 Gene3D G3DSA:2.40.50.40 138 206 5.8E-11 T 11-10-2018 AYJ52_06525 eb868bf6dcc4a5933d68c18c87574ef4 246 SMART SM00448 1 111 4.4E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 Gene3D G3DSA:3.40.50.720 1 260 3.1E-68 T 11-10-2018 AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 SUPERFAMILY SSF51735 9 258 1.3E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_11340 641de6785a3e5c7f5449b81f0026f332 261 Pfam PF00106 short chain dehydrogenase 10 192 3.6E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_05040 531c0bb05d14cbf0665906f481cbb8d8 301 Pfam PF00413 Matrixin 37 294 1.8E-11 T 11-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 AYJ52_05040 531c0bb05d14cbf0665906f481cbb8d8 301 SUPERFAMILY SSF55486 222 297 2.59E-13 T 11-10-2018 AYJ52_17550 5cfc238453d356b831fb65641d1b4ccf 203 Pfam PF03330 Lytic transglycolase 106 194 1.5E-27 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AYJ52_17550 5cfc238453d356b831fb65641d1b4ccf 203 Gene3D G3DSA:2.40.40.10 105 199 1.7E-40 T 11-10-2018 IPR036908 RlpA-like domain superfamily AYJ52_17550 5cfc238453d356b831fb65641d1b4ccf 203 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 16 198 24.937 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AYJ52_17550 5cfc238453d356b831fb65641d1b4ccf 203 SUPERFAMILY SSF50685 106 199 6.98E-15 T 11-10-2018 IPR036908 RlpA-like domain superfamily AYJ52_17550 5cfc238453d356b831fb65641d1b4ccf 203 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 108 198 8.6E-43 T 11-10-2018 IPR012997 Rare lipoprotein A AYJ52_14865 c134a85133be3041e56b9def59680b12 546 Pfam PF00501 AMP-binding enzyme 36 455 2.7E-104 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_14865 c134a85133be3041e56b9def59680b12 546 Gene3D G3DSA:3.40.50.12780 13 446 2.5E-113 T 11-10-2018 AYJ52_14865 c134a85133be3041e56b9def59680b12 546 Gene3D G3DSA:3.30.300.310 451 546 7.9E-31 T 11-10-2018 AYJ52_14865 c134a85133be3041e56b9def59680b12 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 464 538 1.8E-17 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_14865 c134a85133be3041e56b9def59680b12 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 200 211 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_14865 c134a85133be3041e56b9def59680b12 546 SUPERFAMILY SSF56801 20 545 4.84E-142 T 11-10-2018 AYJ52_16925 d34ef79a94c8ab95f0778bf598ad9204 190 Gene3D G3DSA:3.10.450.50 48 174 8.6E-9 T 11-10-2018 AYJ52_16925 d34ef79a94c8ab95f0778bf598ad9204 190 SUPERFAMILY SSF54427 46 164 7.1E-13 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_09630 0fef4ab20ba568a30306aee466825c37 326 SUPERFAMILY SSF46785 6 87 3.1E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_09630 0fef4ab20ba568a30306aee466825c37 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.3E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_09630 0fef4ab20ba568a30306aee466825c37 326 SUPERFAMILY SSF53850 93 295 1.16E-33 T 11-10-2018 AYJ52_09630 0fef4ab20ba568a30306aee466825c37 326 Gene3D G3DSA:3.40.190.10 166 267 1.3E-53 T 11-10-2018 AYJ52_09630 0fef4ab20ba568a30306aee466825c37 326 Gene3D G3DSA:1.10.10.10 6 90 2.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_09630 0fef4ab20ba568a30306aee466825c37 326 Gene3D G3DSA:3.40.190.10 95 291 1.3E-53 T 11-10-2018 AYJ52_09630 0fef4ab20ba568a30306aee466825c37 326 Pfam PF03466 LysR substrate binding domain 93 294 3.0E-27 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_00685 908bbb533f1d7992f6b7035bf119230a 551 Gene3D G3DSA:1.50.10.10 187 431 1.5E-6 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AYJ52_00685 908bbb533f1d7992f6b7035bf119230a 551 SUPERFAMILY SSF48208 175 411 4.76E-14 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AYJ52_00830 fc16bb56f723e88216ee68b78ec45b9c 461 PIRSF PIRSF006060 4 461 1.3E-62 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_00830 fc16bb56f723e88216ee68b78ec45b9c 461 Gene3D G3DSA:1.20.1740.10 12 458 1.4E-70 T 11-10-2018 AYJ52_00830 fc16bb56f723e88216ee68b78ec45b9c 461 Pfam PF00324 Amino acid permease 21 386 2.8E-38 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_12140 fe8ed3ba47437dd62b4f6782c1cbf13b 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 26 39 1.6E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_12140 fe8ed3ba47437dd62b4f6782c1cbf13b 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 26 1.6E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_12140 fe8ed3ba47437dd62b4f6782c1cbf13b 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 49 69 1.6E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_12140 fe8ed3ba47437dd62b4f6782c1cbf13b 154 Pfam PF09278 MerR, DNA binding 57 121 1.9E-14 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AYJ52_12140 fe8ed3ba47437dd62b4f6782c1cbf13b 154 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 14 152 1.6E-63 T 11-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AYJ52_12140 fe8ed3ba47437dd62b4f6782c1cbf13b 154 Pfam PF00376 MerR family regulatory protein 15 51 1.6E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_12140 fe8ed3ba47437dd62b4f6782c1cbf13b 154 Gene3D G3DSA:1.10.1660.10 3 137 2.6E-33 T 11-10-2018 AYJ52_12140 fe8ed3ba47437dd62b4f6782c1cbf13b 154 SMART SM00422 14 82 5.1E-23 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_12140 fe8ed3ba47437dd62b4f6782c1cbf13b 154 SUPERFAMILY SSF46955 14 136 1.32E-27 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_12950 43902d214ca098e269ce8b84b32c1901 389 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 388 5.2E-201 T 11-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 AYJ52_12950 43902d214ca098e269ce8b84b32c1901 389 Pfam PF00155 Aminotransferase class I and II 30 385 1.8E-52 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_12950 43902d214ca098e269ce8b84b32c1901 389 SUPERFAMILY SSF53383 2 389 6.32E-93 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_12950 43902d214ca098e269ce8b84b32c1901 389 Gene3D G3DSA:3.40.640.10 42 287 1.3E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_12950 43902d214ca098e269ce8b84b32c1901 389 Gene3D G3DSA:3.90.1150.10 13 380 1.3E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_17250 db1920b1175ca455181d8581163e9a49 81 SUPERFAMILY SSF64307 8 79 8.11E-15 T 11-10-2018 IPR036868 TusA-like domain superfamily AYJ52_17250 db1920b1175ca455181d8581163e9a49 81 Gene3D G3DSA:3.30.110.40 2 81 6.2E-12 T 11-10-2018 IPR036868 TusA-like domain superfamily AYJ52_17250 db1920b1175ca455181d8581163e9a49 81 Pfam PF01206 Sulfurtransferase TusA 11 79 5.3E-14 T 11-10-2018 IPR001455 TusA-like domain AYJ52_06805 54d2e59f9e90a4f65e07a62c792b14f1 68 Pfam PF07869 Protein of unknown function (DUF1656) 3 56 1.1E-11 T 11-10-2018 IPR012451 Protein of unknown function DUF1656 AYJ52_15575 4645b2d8cd522e7c2d3582f6eb934c32 484 Pfam PF01740 STAS domain 395 483 6.2E-10 T 11-10-2018 IPR002645 STAS domain AYJ52_15575 4645b2d8cd522e7c2d3582f6eb934c32 484 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 11-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 AYJ52_15575 4645b2d8cd522e7c2d3582f6eb934c32 484 SUPERFAMILY SSF52091 390 481 1.31E-12 T 11-10-2018 IPR036513 STAS domain superfamily AYJ52_15575 4645b2d8cd522e7c2d3582f6eb934c32 484 Gene3D G3DSA:3.30.750.24 388 482 3.7E-28 T 11-10-2018 IPR036513 STAS domain superfamily AYJ52_15575 4645b2d8cd522e7c2d3582f6eb934c32 484 Pfam PF00916 Sulfate permease family 14 143 3.5E-27 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AYJ52_15575 4645b2d8cd522e7c2d3582f6eb934c32 484 Pfam PF00916 Sulfate permease family 156 357 2.8E-27 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AYJ52_07310 0bc9c2313b3514a3fb5a7b68cda61570 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.853 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AYJ52_07310 0bc9c2313b3514a3fb5a7b68cda61570 215 SUPERFAMILY SSF52016 2 204 3.73E-62 T 11-10-2018 AYJ52_07310 0bc9c2313b3514a3fb5a7b68cda61570 215 Pfam PF00694 Aconitase C-terminal domain 1 132 2.5E-37 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AYJ52_07310 0bc9c2313b3514a3fb5a7b68cda61570 215 Gene3D G3DSA:3.20.19.10 1 184 8.8E-78 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AYJ52_07310 0bc9c2313b3514a3fb5a7b68cda61570 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.1E-84 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AYJ52_16965 a62a894be95bf62d364f053470ac3f13 420 SUPERFAMILY SSF51905 1 417 9.06E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_16965 a62a894be95bf62d364f053470ac3f13 420 Gene3D G3DSA:1.10.405.20 75 199 1.0E-26 T 11-10-2018 AYJ52_16965 a62a894be95bf62d364f053470ac3f13 420 Gene3D G3DSA:3.30.70.1990 282 368 1.0E-26 T 11-10-2018 AYJ52_16965 a62a894be95bf62d364f053470ac3f13 420 Pfam PF13450 NAD(P)-binding Rossmann-like domain 5 74 4.5E-15 T 11-10-2018 AYJ52_16965 a62a894be95bf62d364f053470ac3f13 420 Gene3D G3DSA:3.50.50.60 3 403 1.0E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_04250 4498579266e44fb9d47ede9d8fdd45c1 336 PIRSF PIRSF016516 2 335 3.0E-147 T 11-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AYJ52_04250 4498579266e44fb9d47ede9d8fdd45c1 336 TIGRFAM TIGR02961 allantoicase: allantoicase 19 332 1.9E-142 T 11-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AYJ52_04250 4498579266e44fb9d47ede9d8fdd45c1 336 SUPERFAMILY SSF49785 174 333 1.36E-54 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AYJ52_04250 4498579266e44fb9d47ede9d8fdd45c1 336 Hamap MF_00813 Probable allantoicase [alc]. 1 334 46.535 T 11-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AYJ52_04250 4498579266e44fb9d47ede9d8fdd45c1 336 SUPERFAMILY SSF49785 17 172 7.65E-59 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AYJ52_04250 4498579266e44fb9d47ede9d8fdd45c1 336 Gene3D G3DSA:2.60.120.260 173 335 3.1E-56 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AYJ52_04250 4498579266e44fb9d47ede9d8fdd45c1 336 Gene3D G3DSA:2.60.120.260 9 172 2.9E-59 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AYJ52_04250 4498579266e44fb9d47ede9d8fdd45c1 336 Pfam PF03561 Allantoicase repeat 191 331 1.1E-46 T 11-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AYJ52_04250 4498579266e44fb9d47ede9d8fdd45c1 336 Pfam PF03561 Allantoicase repeat 27 170 3.4E-48 T 11-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AYJ52_13475 4b854030c7adfaef0e0e2d775769e28b 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_13475 4b854030c7adfaef0e0e2d775769e28b 184 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 1.4E-8 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AYJ52_13475 4b854030c7adfaef0e0e2d775769e28b 184 PRINTS PR00885 Bacterial general secretion pathway protein H signature 145 160 1.4E-8 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AYJ52_13475 4b854030c7adfaef0e0e2d775769e28b 184 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 1.4E-8 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AYJ52_13475 4b854030c7adfaef0e0e2d775769e28b 184 SUPERFAMILY SSF54523 13 79 6.83E-7 T 11-10-2018 AYJ52_13475 4b854030c7adfaef0e0e2d775769e28b 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 8.4E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_13475 4b854030c7adfaef0e0e2d775769e28b 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 5.5E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_13475 4b854030c7adfaef0e0e2d775769e28b 184 Gene3D G3DSA:3.30.700.10 13 66 1.9E-6 T 11-10-2018 AYJ52_05985 ce8c7275fb5b563f00678cae3a01089f 188 SUPERFAMILY SSF52218 1 183 1.01E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_05985 ce8c7275fb5b563f00678cae3a01089f 188 Pfam PF03358 NADPH-dependent FMN reductase 47 103 1.9E-9 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AYJ52_05985 ce8c7275fb5b563f00678cae3a01089f 188 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AYJ52_05985 ce8c7275fb5b563f00678cae3a01089f 188 Gene3D G3DSA:3.40.50.360 1 187 2.5E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_00915 922f88bbf4aa278ef560082559230f44 415 Pfam PF00529 HlyD membrane-fusion protein of T1SS 298 365 5.3E-8 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_00915 922f88bbf4aa278ef560082559230f44 415 Gene3D G3DSA:2.40.420.20 309 378 2.8E-104 T 11-10-2018 AYJ52_00915 922f88bbf4aa278ef560082559230f44 415 Gene3D G3DSA:2.40.30.170 57 308 2.8E-104 T 11-10-2018 AYJ52_00915 922f88bbf4aa278ef560082559230f44 415 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 297 2.2E-14 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_00915 922f88bbf4aa278ef560082559230f44 415 SUPERFAMILY SSF111369 59 305 4.18E-79 T 11-10-2018 AYJ52_00915 922f88bbf4aa278ef560082559230f44 415 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 380 6.1E-82 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_00915 922f88bbf4aa278ef560082559230f44 415 Gene3D G3DSA:1.10.287.470 105 178 2.8E-104 T 11-10-2018 AYJ52_00915 922f88bbf4aa278ef560082559230f44 415 Gene3D G3DSA:2.40.50.100 70 214 2.8E-104 T 11-10-2018 AYJ52_06930 11b3df57254e2cd18143523ffa02058b 603 Pfam PF00361 Proton-conducting membrane transporter 143 433 2.3E-40 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_06930 11b3df57254e2cd18143523ffa02058b 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 2.3E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_06930 11b3df57254e2cd18143523ffa02058b 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 178 202 2.3E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_06930 11b3df57254e2cd18143523ffa02058b 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 394 420 2.3E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_06930 11b3df57254e2cd18143523ffa02058b 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 341 360 2.3E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_06930 11b3df57254e2cd18143523ffa02058b 603 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 148 167 2.3E-9 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_16185 ef3ac76d57dbb7d31898e31197788b2b 284 SUPERFAMILY SSF103481 188 282 8.37E-14 T 11-10-2018 AYJ52_16185 ef3ac76d57dbb7d31898e31197788b2b 284 SUPERFAMILY SSF103481 43 141 7.72E-9 T 11-10-2018 AYJ52_16185 ef3ac76d57dbb7d31898e31197788b2b 284 Pfam PF00892 EamA-like transporter family 150 281 8.3E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_16185 ef3ac76d57dbb7d31898e31197788b2b 284 Pfam PF00892 EamA-like transporter family 17 138 8.0E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_13445 01b2f387cdfb8b48fecb6efb82c5bc6e 336 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 336 34.321 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AYJ52_13445 01b2f387cdfb8b48fecb6efb82c5bc6e 336 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 27 329 1.2E-66 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AYJ52_13445 01b2f387cdfb8b48fecb6efb82c5bc6e 336 SUPERFAMILY SSF52540 51 177 3.37E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13445 01b2f387cdfb8b48fecb6efb82c5bc6e 336 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 17 328 5.3E-98 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 PRINTS PR01874 DNA repair protein radA signature 125 142 1.3E-91 T 11-10-2018 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 PRINTS PR01874 DNA repair protein radA signature 249 275 1.3E-91 T 11-10-2018 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 PRINTS PR01874 DNA repair protein radA signature 214 242 1.3E-91 T 11-10-2018 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 PRINTS PR01874 DNA repair protein radA signature 322 345 1.3E-91 T 11-10-2018 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 PRINTS PR01874 DNA repair protein radA signature 175 199 1.3E-91 T 11-10-2018 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 PRINTS PR01874 DNA repair protein radA signature 83 111 1.3E-91 T 11-10-2018 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 PRINTS PR01874 DNA repair protein radA signature 10 34 1.3E-91 T 11-10-2018 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 SUPERFAMILY SSF52540 70 288 2.56E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 Gene3D G3DSA:3.30.230.10 319 458 3.5E-17 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 SMART SM00382 91 246 5.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 SUPERFAMILY SSF54211 256 454 8.72E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 8.1E-192 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 Gene3D G3DSA:3.40.50.300 67 285 1.0E-40 T 11-10-2018 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 430 7.8E-7 T 11-10-2018 AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 Pfam PF06745 KaiC 75 150 4.6E-11 T 11-10-2018 IPR014774 KaiC-like domain AYJ52_00210 6fb00662beeb4c8af14a80747506f33a 462 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 42.837 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AYJ52_07930 a7ed85684a0512d229bcc90f7d224400 163 SUPERFAMILY SSF55021 2 76 2.52E-22 T 11-10-2018 AYJ52_07930 a7ed85684a0512d229bcc90f7d224400 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 8.7E-64 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AYJ52_07930 a7ed85684a0512d229bcc90f7d224400 163 Gene3D G3DSA:3.30.70.260 1 78 1.2E-34 T 11-10-2018 AYJ52_07930 a7ed85684a0512d229bcc90f7d224400 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 5.0E-38 T 11-10-2018 AYJ52_07930 a7ed85684a0512d229bcc90f7d224400 163 SUPERFAMILY SSF55021 79 161 7.75E-27 T 11-10-2018 AYJ52_07930 a7ed85684a0512d229bcc90f7d224400 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 8.9E-28 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AYJ52_07930 a7ed85684a0512d229bcc90f7d224400 163 Pfam PF13710 ACT domain 13 73 5.2E-17 T 11-10-2018 AYJ52_07930 a7ed85684a0512d229bcc90f7d224400 163 Gene3D G3DSA:3.30.70.1150 83 163 9.4E-30 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AYJ52_05900 1803ed6b97439d955c59fd352f031ce1 189 Gene3D G3DSA:3.90.870.10 1 188 4.5E-53 T 11-10-2018 AYJ52_05900 1803ed6b97439d955c59fd352f031ce1 189 Pfam PF01300 Telomere recombination 11 188 9.7E-34 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AYJ52_05900 1803ed6b97439d955c59fd352f031ce1 189 SUPERFAMILY SSF55821 6 188 3.05E-43 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AYJ52_05900 1803ed6b97439d955c59fd352f031ce1 189 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 3 188 35.022 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AYJ52_05535 85fae8ca9383638d33a51ff17d0354d1 233 Pfam PF06210 Protein of unknown function (DUF1003) 116 215 5.8E-41 T 11-10-2018 IPR010406 Protein of unknown function DUF1003 AYJ52_11975 f1664ed3f940d11af513c050983dac39 121 Gene3D G3DSA:1.10.10.10 2 119 1.2E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_11975 f1664ed3f940d11af513c050983dac39 121 SUPERFAMILY SSF46785 12 112 7.28E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_11975 f1664ed3f940d11af513c050983dac39 121 Pfam PF01638 HxlR-like helix-turn-helix 27 114 1.1E-28 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AYJ52_10510 e3127e021c46504d2a7f219400618076 204 SUPERFAMILY SSF52540 4 198 9.74E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_10510 e3127e021c46504d2a7f219400618076 204 PIRSF PIRSF005624 1 203 1.2E-46 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 AYJ52_10510 e3127e021c46504d2a7f219400618076 204 Gene3D G3DSA:3.40.50.300 7 203 4.0E-49 T 11-10-2018 AYJ52_10510 e3127e021c46504d2a7f219400618076 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 179 9.5E-37 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AYJ52_10510 e3127e021c46504d2a7f219400618076 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 7 203 3.9E-103 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AYJ52_10510 e3127e021c46504d2a7f219400618076 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 5 203 47.214 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AYJ52_13500 b4582a8c16efa50806255df96c992cc7 237 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 18 227 1.0E-83 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AYJ52_13500 b4582a8c16efa50806255df96c992cc7 237 Gene3D G3DSA:3.40.470.10 1 237 2.1E-99 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AYJ52_13500 b4582a8c16efa50806255df96c992cc7 237 SMART SM00986 62 223 2.3E-36 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AYJ52_13500 b4582a8c16efa50806255df96c992cc7 237 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 17 234 40.142 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AYJ52_13500 b4582a8c16efa50806255df96c992cc7 237 SUPERFAMILY SSF52141 15 235 4.58E-90 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AYJ52_13500 b4582a8c16efa50806255df96c992cc7 237 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 70 79 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AYJ52_13500 b4582a8c16efa50806255df96c992cc7 237 SMART SM00987 62 223 2.3E-36 T 11-10-2018 AYJ52_13500 b4582a8c16efa50806255df96c992cc7 237 Pfam PF03167 Uracil DNA glycosylase superfamily 67 222 1.8E-25 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 413 432 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 126 150 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 280 301 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 180 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 218 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 371 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 122 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 403 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 463 484 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 49 74 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 229 248 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 341 8.1E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 Gene3D G3DSA:1.20.210.10 23 561 1.5E-186 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 SUPERFAMILY SSF81442 45 559 9.55E-176 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 5 649 0.0 T 11-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 282 336 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16710 65d0cf5d91d0eae03306e383b6ab4288 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 58 506 2.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_13795 05e358d9288805bddfed23edd62131a7 208 Gene3D G3DSA:3.90.1140.10 26 202 3.2E-7 T 11-10-2018 AYJ52_13795 05e358d9288805bddfed23edd62131a7 208 Pfam PF13563 2'-5' RNA ligase superfamily 50 183 1.4E-7 T 11-10-2018 AYJ52_13795 05e358d9288805bddfed23edd62131a7 208 SUPERFAMILY SSF55144 29 174 4.58E-9 T 11-10-2018 IPR009097 Cyclic phosphodiesterase AYJ52_13225 a98e82d9b5512786249d1e38724e2a47 197 SUPERFAMILY SSF47413 2 71 4.5E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_13225 a98e82d9b5512786249d1e38724e2a47 197 SMART SM00530 11 66 5.3E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_13225 a98e82d9b5512786249d1e38724e2a47 197 SUPERFAMILY SSF51182 59 187 1.35E-19 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_13225 a98e82d9b5512786249d1e38724e2a47 197 Pfam PF01381 Helix-turn-helix 12 65 8.7E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_13225 a98e82d9b5512786249d1e38724e2a47 197 Gene3D G3DSA:1.10.260.40 2 79 4.3E-19 T 11-10-2018 AYJ52_13225 a98e82d9b5512786249d1e38724e2a47 197 Gene3D G3DSA:2.60.120.10 97 190 6.2E-8 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_03050 5b62786deab88c0fc2660e6d1d97047d 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 222 466 2.1E-62 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AYJ52_03050 5b62786deab88c0fc2660e6d1d97047d 469 Pfam PF01565 FAD binding domain 46 184 8.3E-40 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AYJ52_03050 5b62786deab88c0fc2660e6d1d97047d 469 Gene3D G3DSA:3.30.465.10 100 220 1.0E-39 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AYJ52_03050 5b62786deab88c0fc2660e6d1d97047d 469 Gene3D G3DSA:3.30.70.2190 222 338 1.3E-26 T 11-10-2018 AYJ52_03050 5b62786deab88c0fc2660e6d1d97047d 469 Gene3D G3DSA:3.30.70.2740 341 426 4.2E-27 T 11-10-2018 AYJ52_03050 5b62786deab88c0fc2660e6d1d97047d 469 SUPERFAMILY SSF56176 4 222 1.4E-67 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AYJ52_03050 5b62786deab88c0fc2660e6d1d97047d 469 Gene3D G3DSA:3.30.43.10 1 98 8.0E-27 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AYJ52_03050 5b62786deab88c0fc2660e6d1d97047d 469 Gene3D G3DSA:1.10.45.10 427 466 1.1E-14 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AYJ52_03050 5b62786deab88c0fc2660e6d1d97047d 469 SUPERFAMILY SSF55103 226 468 6.7E-62 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AYJ52_09025 12caabaa175733437b95fd8031cd5a42 478 Pfam PF02321 Outer membrane efflux protein 76 253 1.1E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_09025 12caabaa175733437b95fd8031cd5a42 478 Pfam PF02321 Outer membrane efflux protein 283 458 4.0E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_09025 12caabaa175733437b95fd8031cd5a42 478 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 71 467 8.1E-69 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AYJ52_09025 12caabaa175733437b95fd8031cd5a42 478 SUPERFAMILY SSF56954 70 459 1.28E-63 T 11-10-2018 AYJ52_09025 12caabaa175733437b95fd8031cd5a42 478 Gene3D G3DSA:1.20.1600.10 73 469 1.4E-63 T 11-10-2018 AYJ52_03570 c9234e331eff09861e66e4bb317f0b94 334 SMART SM00342 245 327 1.8E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_03570 c9234e331eff09861e66e4bb317f0b94 334 Pfam PF12833 Helix-turn-helix domain 251 328 5.6E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_03570 c9234e331eff09861e66e4bb317f0b94 334 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 48 200 7.4E-26 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_03570 c9234e331eff09861e66e4bb317f0b94 334 SUPERFAMILY SSF46689 280 330 9.68E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_03570 c9234e331eff09861e66e4bb317f0b94 334 Gene3D G3DSA:1.10.10.60 225 332 2.9E-23 T 11-10-2018 AYJ52_07180 1683fde8a2181134a35af1b68d765dfd 416 Gene3D G3DSA:1.20.140.10 228 405 5.4E-50 T 11-10-2018 AYJ52_07180 1683fde8a2181134a35af1b68d765dfd 416 PIRSF PIRSF016578 4 90 2.6E-6 T 11-10-2018 AYJ52_07180 1683fde8a2181134a35af1b68d765dfd 416 PIRSF PIRSF016578 141 395 4.4E-21 T 11-10-2018 AYJ52_07180 1683fde8a2181134a35af1b68d765dfd 416 SUPERFAMILY SSF47203 238 382 3.14E-11 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_07180 1683fde8a2181134a35af1b68d765dfd 416 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 244 381 2.2E-14 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_07180 1683fde8a2181134a35af1b68d765dfd 416 Gene3D G3DSA:2.40.110.10 129 227 1.2E-26 T 11-10-2018 AYJ52_07180 1683fde8a2181134a35af1b68d765dfd 416 SUPERFAMILY SSF56645 25 227 7.72E-36 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_07180 1683fde8a2181134a35af1b68d765dfd 416 Gene3D G3DSA:1.10.540.10 13 128 1.0E-17 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_09355 cab1cab80c6c516fe3e3ae359530c3c5 244 Gene3D G3DSA:3.30.420.490 119 227 2.5E-47 T 11-10-2018 AYJ52_09355 cab1cab80c6c516fe3e3ae359530c3c5 244 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 235 7.7E-26 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AYJ52_09355 cab1cab80c6c516fe3e3ae359530c3c5 244 SUPERFAMILY SSF53067 118 240 1.32E-25 T 11-10-2018 AYJ52_09355 cab1cab80c6c516fe3e3ae359530c3c5 244 Gene3D G3DSA:3.30.420.40 6 234 2.5E-47 T 11-10-2018 AYJ52_09355 cab1cab80c6c516fe3e3ae359530c3c5 244 SUPERFAMILY SSF53067 4 113 1.07E-21 T 11-10-2018 AYJ52_09355 cab1cab80c6c516fe3e3ae359530c3c5 244 Pfam PF03309 Type III pantothenate kinase 4 198 4.1E-43 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AYJ52_09355 cab1cab80c6c516fe3e3ae359530c3c5 244 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 242 19.127 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AYJ52_05060 3b155f794f09f2632a8a53d6b3b98dd4 297 SUPERFAMILY SSF53850 87 289 1.47E-39 T 11-10-2018 AYJ52_05060 3b155f794f09f2632a8a53d6b3b98dd4 297 SUPERFAMILY SSF46785 4 84 1.79E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_05060 3b155f794f09f2632a8a53d6b3b98dd4 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.4E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_05060 3b155f794f09f2632a8a53d6b3b98dd4 297 Gene3D G3DSA:3.40.190.290 89 289 1.6E-51 T 11-10-2018 AYJ52_05060 3b155f794f09f2632a8a53d6b3b98dd4 297 Gene3D G3DSA:1.10.10.10 3 88 3.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_05060 3b155f794f09f2632a8a53d6b3b98dd4 297 Pfam PF03466 LysR substrate binding domain 87 289 7.6E-37 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_13230 7301874647ec7f8061b960ac40a21e48 181 SUPERFAMILY SSF55729 16 173 5.4E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_13230 7301874647ec7f8061b960ac40a21e48 181 Pfam PF00583 Acetyltransferase (GNAT) family 41 146 3.5E-14 T 11-10-2018 IPR000182 GNAT domain AYJ52_13230 7301874647ec7f8061b960ac40a21e48 181 Gene3D G3DSA:3.40.630.30 3 181 3.3E-53 T 11-10-2018 AYJ52_13605 fea1be80c55980c764916dde8450f007 606 Gene3D G3DSA:3.10.105.10 346 575 1.5E-93 T 11-10-2018 AYJ52_13605 fea1be80c55980c764916dde8450f007 606 PIRSF PIRSF002741 3 599 1.6E-57 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AYJ52_13605 fea1be80c55980c764916dde8450f007 606 SUPERFAMILY SSF53850 35 599 6.95E-90 T 11-10-2018 AYJ52_13605 fea1be80c55980c764916dde8450f007 606 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 517 1.8E-66 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AYJ52_13605 fea1be80c55980c764916dde8450f007 606 Gene3D G3DSA:3.40.190.10 235 587 1.5E-93 T 11-10-2018 AYJ52_13605 fea1be80c55980c764916dde8450f007 606 Gene3D G3DSA:3.90.76.10 54 234 1.5E-93 T 11-10-2018 AYJ52_08965 752afc01e079623bc01de65a1c6961de 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 184 338 1.5E-35 T 11-10-2018 IPR017516 AbrB duplication AYJ52_08965 752afc01e079623bc01de65a1c6961de 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 161 1.6E-33 T 11-10-2018 IPR017516 AbrB duplication AYJ52_08965 752afc01e079623bc01de65a1c6961de 348 Pfam PF05145 Transition state regulatory protein AbrB 30 337 1.1E-69 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AYJ52_08965 752afc01e079623bc01de65a1c6961de 348 PIRSF PIRSF038991 2 347 6.9E-69 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AYJ52_05170 b4572cfd1f867f5285714968cc30a66f 266 Pfam PF00005 ABC transporter 47 183 8.2E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_05170 b4572cfd1f867f5285714968cc30a66f 266 Gene3D G3DSA:3.40.50.300 32 262 1.5E-63 T 11-10-2018 AYJ52_05170 b4572cfd1f867f5285714968cc30a66f 266 SMART SM00382 56 233 1.1E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_05170 b4572cfd1f867f5285714968cc30a66f 266 SUPERFAMILY SSF52540 32 253 7.24E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02650 e70fbba53c6ddc281f3eab06dd2f8ab1 65 Pfam PF00831 Ribosomal L29 protein 4 60 1.0E-19 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02650 e70fbba53c6ddc281f3eab06dd2f8ab1 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.0E-18 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02650 e70fbba53c6ddc281f3eab06dd2f8ab1 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.717 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02650 e70fbba53c6ddc281f3eab06dd2f8ab1 65 SUPERFAMILY SSF46561 1 63 4.45E-19 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02650 e70fbba53c6ddc281f3eab06dd2f8ab1 65 Gene3D G3DSA:1.10.287.310 1 63 2.8E-22 T 11-10-2018 AYJ52_05580 c8be6a64beb744a37e2bdefd5a229c37 119 SUPERFAMILY SSF55298 7 118 9.11E-27 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_05580 c8be6a64beb744a37e2bdefd5a229c37 119 Gene3D G3DSA:3.30.1330.40 1 119 1.3E-34 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_05580 c8be6a64beb744a37e2bdefd5a229c37 119 Pfam PF01042 Endoribonuclease L-PSP 16 117 1.1E-21 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AYJ52_03835 a6b2ad856588a80d74b4be55aab1a533 432 SUPERFAMILY SSF51905 2 411 1.05E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_03835 a6b2ad856588a80d74b4be55aab1a533 432 Pfam PF01593 Flavin containing amine oxidoreductase 10 262 1.4E-17 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AYJ52_03835 a6b2ad856588a80d74b4be55aab1a533 432 Gene3D G3DSA:3.50.50.60 1 278 9.3E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_09485 a83e254ee33f37160f6aaff5260d10ff 157 SMART SM00257 107 156 1.4E-11 T 11-10-2018 IPR018392 LysM domain AYJ52_09485 a83e254ee33f37160f6aaff5260d10ff 157 SUPERFAMILY SSF54106 106 156 2.09E-7 T 11-10-2018 AYJ52_09485 a83e254ee33f37160f6aaff5260d10ff 157 Pfam PF01476 LysM domain 108 156 1.3E-12 T 11-10-2018 IPR018392 LysM domain AYJ52_09485 a83e254ee33f37160f6aaff5260d10ff 157 Pfam PF04972 BON domain 44 99 1.8E-7 T 11-10-2018 IPR007055 BON domain AYJ52_09485 a83e254ee33f37160f6aaff5260d10ff 157 Gene3D G3DSA:3.10.350.10 107 155 1.0E-14 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_01225 e84b356d0414e316bdcd42ae1cda9df7 232 Pfam PF02525 Flavodoxin-like fold 1 204 8.0E-51 T 11-10-2018 IPR003680 Flavodoxin-like fold AYJ52_01225 e84b356d0414e316bdcd42ae1cda9df7 232 Gene3D G3DSA:3.40.50.360 1 231 1.9E-76 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_01225 e84b356d0414e316bdcd42ae1cda9df7 232 SUPERFAMILY SSF52218 1 229 1.24E-65 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_06345 59fbe5a800fa97d5d162b04dde2e0281 430 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 262 268 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AYJ52_06345 59fbe5a800fa97d5d162b04dde2e0281 430 SUPERFAMILY SSF53335 23 357 4.16E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_06345 59fbe5a800fa97d5d162b04dde2e0281 430 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 29 349 1.5E-25 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AYJ52_02705 dc05b8745986b28e7cb13600c458b6e7 396 PIRSF PIRSF001434 1 396 1.8E-100 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AYJ52_02705 dc05b8745986b28e7cb13600c458b6e7 396 Gene3D G3DSA:3.90.1150.10 261 396 2.0E-31 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_02705 dc05b8745986b28e7cb13600c458b6e7 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 394 1.1E-70 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AYJ52_02705 dc05b8745986b28e7cb13600c458b6e7 396 Gene3D G3DSA:3.40.640.10 2 258 5.3E-50 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_02705 dc05b8745986b28e7cb13600c458b6e7 396 SUPERFAMILY SSF53383 27 395 1.14E-73 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_13590 e1218405a1e6ddbcdd2af834e49117e2 237 Gene3D G3DSA:3.30.1150.10 102 237 8.9E-21 T 11-10-2018 AYJ52_13590 e1218405a1e6ddbcdd2af834e49117e2 237 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 159 234 1.1E-20 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AYJ52_13590 e1218405a1e6ddbcdd2af834e49117e2 237 PRINTS PR01374 Gram-negative bacterial tonB protein signature 69 79 5.4E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AYJ52_13590 e1218405a1e6ddbcdd2af834e49117e2 237 PRINTS PR01374 Gram-negative bacterial tonB protein signature 154 175 5.4E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AYJ52_13590 e1218405a1e6ddbcdd2af834e49117e2 237 PRINTS PR01374 Gram-negative bacterial tonB protein signature 175 193 5.4E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AYJ52_13590 e1218405a1e6ddbcdd2af834e49117e2 237 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 160 235 1.1E-18 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AYJ52_13590 e1218405a1e6ddbcdd2af834e49117e2 237 SUPERFAMILY SSF74653 159 234 1.02E-20 T 11-10-2018 AYJ52_16295 0d9acd6dd635c346ae90a5ff630f0e03 253 SUPERFAMILY SSF51735 15 215 2.7E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_16295 0d9acd6dd635c346ae90a5ff630f0e03 253 Gene3D G3DSA:3.40.50.720 7 253 1.1E-43 T 11-10-2018 AYJ52_16295 0d9acd6dd635c346ae90a5ff630f0e03 253 Pfam PF00106 short chain dehydrogenase 14 198 4.1E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14630 a4b551adecba6e59231ccc05178864fc 458 Gene3D G3DSA:1.20.1250.20 4 443 6.6E-78 T 11-10-2018 AYJ52_14630 a4b551adecba6e59231ccc05178864fc 458 Pfam PF07690 Major Facilitator Superfamily 26 400 3.1E-49 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_14630 a4b551adecba6e59231ccc05178864fc 458 SUPERFAMILY SSF103473 8 436 4.58E-83 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_12210 c1b6ab7259fc25173efe7c1dfc7bfd5f 429 Pfam PF00501 AMP-binding enzyme 14 287 1.5E-17 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_12210 c1b6ab7259fc25173efe7c1dfc7bfd5f 429 SUPERFAMILY SSF56801 37 406 1.31E-62 T 11-10-2018 AYJ52_12210 c1b6ab7259fc25173efe7c1dfc7bfd5f 429 PIRSF PIRSF006444 1 428 1.5E-200 T 11-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 AYJ52_12210 c1b6ab7259fc25173efe7c1dfc7bfd5f 429 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 426 4.2E-26 T 11-10-2018 IPR028154 AMP-dependent ligase, C-terminal AYJ52_12210 c1b6ab7259fc25173efe7c1dfc7bfd5f 429 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 10 426 1.3E-203 T 11-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 AYJ52_12210 c1b6ab7259fc25173efe7c1dfc7bfd5f 429 Gene3D G3DSA:3.40.50.12780 1 327 8.0E-130 T 11-10-2018 AYJ52_12210 c1b6ab7259fc25173efe7c1dfc7bfd5f 429 Gene3D G3DSA:3.30.300.30 328 427 9.3E-32 T 11-10-2018 AYJ52_19090 22e5adf07eb383d5998eae3aba9ae43f 541 Pfam PF03743 Bacterial conjugation TrbI-like protein 363 539 3.1E-10 T 11-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AYJ52_16570 87c0cd14df35365078348ee9164f840b 569 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 3 565 1.2E-163 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AYJ52_16570 87c0cd14df35365078348ee9164f840b 569 PIRSF PIRSF001294 1 568 2.5E-218 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AYJ52_16570 87c0cd14df35365078348ee9164f840b 569 Pfam PF03814 Potassium-transporting ATPase A subunit 6 564 8.6E-214 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AYJ52_16570 87c0cd14df35365078348ee9164f840b 569 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 566 27.829 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AYJ52_18355 104ec1af7e7df363c33fa4125b2c00b3 487 SMART SM00880 228 480 1.8E-52 T 11-10-2018 IPR007899 CHAD domain AYJ52_18355 104ec1af7e7df363c33fa4125b2c00b3 487 Pfam PF05235 CHAD domain 231 442 1.0E-35 T 11-10-2018 IPR007899 CHAD domain AYJ52_18355 104ec1af7e7df363c33fa4125b2c00b3 487 SMART SM01118 1 202 6.1E-33 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AYJ52_18355 104ec1af7e7df363c33fa4125b2c00b3 487 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 1 164 2.0E-4 T 11-10-2018 AYJ52_18355 104ec1af7e7df363c33fa4125b2c00b3 487 Gene3D G3DSA:2.40.320.10 1 197 1.9E-35 T 11-10-2018 AYJ52_18355 104ec1af7e7df363c33fa4125b2c00b3 487 Pfam PF01928 CYTH domain 1 194 2.2E-20 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AYJ52_18355 104ec1af7e7df363c33fa4125b2c00b3 487 Gene3D G3DSA:1.40.20.10 208 486 2.8E-46 T 11-10-2018 IPR038186 CHAD domain superfamily AYJ52_18355 104ec1af7e7df363c33fa4125b2c00b3 487 SUPERFAMILY SSF55154 1 218 1.31E-37 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 AYJ52_03535 3b50a0c89c266ff65f02b49155f6c140 183 Gene3D G3DSA:1.10.260.40 1 78 6.1E-19 T 11-10-2018 AYJ52_03535 3b50a0c89c266ff65f02b49155f6c140 183 Pfam PF01381 Helix-turn-helix 15 66 1.4E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_03535 3b50a0c89c266ff65f02b49155f6c140 183 SUPERFAMILY SSF47413 7 74 5.36E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_03535 3b50a0c89c266ff65f02b49155f6c140 183 Pfam PF07883 Cupin domain 112 177 2.3E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AYJ52_03535 3b50a0c89c266ff65f02b49155f6c140 183 SUPERFAMILY SSF51182 9 176 4.46E-14 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_03535 3b50a0c89c266ff65f02b49155f6c140 183 Gene3D G3DSA:2.60.120.10 94 183 4.1E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_03535 3b50a0c89c266ff65f02b49155f6c140 183 SMART SM00530 14 69 7.7E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_12995 d470c3ad87a7e103ca2af625467fbb1a 173 Pfam PF06127 Protein of unknown function (DUF962) 1 147 2.1E-25 T 11-10-2018 IPR009305 Protein of unknown function DUF962 AYJ52_11760 61db93f819b64f07c76ae0ce6b025e16 471 TIGRFAM TIGR00908 2A0305: ethanolamine permease 22 464 1.5E-179 T 11-10-2018 IPR004757 Ethanolamine permease AYJ52_11760 61db93f819b64f07c76ae0ce6b025e16 471 PIRSF PIRSF006060 10 468 1.7E-70 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_11760 61db93f819b64f07c76ae0ce6b025e16 471 Gene3D G3DSA:1.20.1740.10 24 466 1.9E-55 T 11-10-2018 AYJ52_11760 61db93f819b64f07c76ae0ce6b025e16 471 Pfam PF13520 Amino acid permease 32 437 2.6E-39 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_08210 62368723dd6d6b0652b1be846ab943b3 382 SUPERFAMILY SSF56349 69 363 4.12E-26 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AYJ52_08210 62368723dd6d6b0652b1be846ab943b3 382 Pfam PF00589 Phage integrase family 218 364 2.9E-11 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AYJ52_08210 62368723dd6d6b0652b1be846ab943b3 382 Gene3D G3DSA:1.10.443.10 192 370 9.4E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AYJ52_06015 e40565815e899adb184576f40c1a8f07 117 SUPERFAMILY SSF55298 10 117 2.98E-32 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_06015 e40565815e899adb184576f40c1a8f07 117 Pfam PF01042 Endoribonuclease L-PSP 5 115 7.9E-27 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AYJ52_06015 e40565815e899adb184576f40c1a8f07 117 Gene3D G3DSA:3.30.1330.40 1 117 3.3E-39 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_15820 99743f883e4e7de9f6c5d3cf865d9bbd 287 Pfam PF00892 EamA-like transporter family 149 280 1.9E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_15820 99743f883e4e7de9f6c5d3cf865d9bbd 287 Pfam PF00892 EamA-like transporter family 6 135 1.7E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_15820 99743f883e4e7de9f6c5d3cf865d9bbd 287 SUPERFAMILY SSF103481 41 135 1.02E-9 T 11-10-2018 AYJ52_15820 99743f883e4e7de9f6c5d3cf865d9bbd 287 SUPERFAMILY SSF103481 183 282 2.22E-6 T 11-10-2018 AYJ52_00095 ca400d08117ecba8d764b933f199c309 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 223 3.7E-93 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 AYJ52_00095 ca400d08117ecba8d764b933f199c309 228 SUPERFAMILY SSF52540 5 225 1.94E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_00095 ca400d08117ecba8d764b933f199c309 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_00095 ca400d08117ecba8d764b933f199c309 228 Pfam PF00005 ABC transporter 26 174 2.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_00095 ca400d08117ecba8d764b933f199c309 228 Gene3D G3DSA:3.40.50.300 3 226 9.9E-65 T 11-10-2018 AYJ52_00095 ca400d08117ecba8d764b933f199c309 228 SMART SM00382 34 223 1.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_02300 e02c9e909a6497bda7a445ed00c87c83 278 SUPERFAMILY SSF52096 14 276 7.35E-64 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_02300 e02c9e909a6497bda7a445ed00c87c83 278 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 276 2.8E-47 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_02300 e02c9e909a6497bda7a445ed00c87c83 278 Gene3D G3DSA:3.90.226.10 14 219 1.4E-57 T 11-10-2018 AYJ52_02300 e02c9e909a6497bda7a445ed00c87c83 278 Gene3D G3DSA:1.10.12.10 220 278 1.1E-23 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AYJ52_17145 d5ecd29cded04b90072540408cda98ae 502 Gene3D G3DSA:3.40.1090.10 249 376 6.8E-14 T 11-10-2018 AYJ52_17145 d5ecd29cded04b90072540408cda98ae 502 Gene3D G3DSA:3.40.1090.10 146 248 4.7E-12 T 11-10-2018 AYJ52_17145 d5ecd29cded04b90072540408cda98ae 502 Pfam PF01734 Patatin-like phospholipase 157 339 3.5E-24 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AYJ52_17145 d5ecd29cded04b90072540408cda98ae 502 Pfam PF11815 Domain of unknown function (DUF3336) 15 149 6.0E-35 T 11-10-2018 IPR021771 Triacylglycerol lipase GO:0004806|GO:0006629 AYJ52_17145 d5ecd29cded04b90072540408cda98ae 502 SUPERFAMILY SSF52151 156 484 6.54E-47 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AYJ52_11885 eb20f058d3ebe64a429b3a327c2eb281 206 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 6 37 3.4E-13 T 11-10-2018 AYJ52_11885 eb20f058d3ebe64a429b3a327c2eb281 206 SUPERFAMILY SSF55811 24 196 3.93E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_11885 eb20f058d3ebe64a429b3a327c2eb281 206 Gene3D G3DSA:3.90.79.10 45 205 7.5E-38 T 11-10-2018 AYJ52_11885 eb20f058d3ebe64a429b3a327c2eb281 206 Pfam PF00293 NUDIX domain 71 178 1.9E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_17445 893a136afeeab371d2742181795f6a83 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ52_17445 893a136afeeab371d2742181795f6a83 87 Gene3D G3DSA:3.30.70.20 2 83 2.1E-31 T 11-10-2018 AYJ52_17445 893a136afeeab371d2742181795f6a83 87 SUPERFAMILY SSF54862 5 74 2.34E-17 T 11-10-2018 AYJ52_01800 51615348333243a0bc7a6bcc564dce6f 349 Pfam PF12833 Helix-turn-helix domain 263 332 2.3E-12 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_01800 51615348333243a0bc7a6bcc564dce6f 349 SMART SM00342 256 337 2.0E-11 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_01800 51615348333243a0bc7a6bcc564dce6f 349 Gene3D G3DSA:1.10.10.60 231 346 4.5E-16 T 11-10-2018 AYJ52_01800 51615348333243a0bc7a6bcc564dce6f 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 42 207 3.4E-22 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_01800 51615348333243a0bc7a6bcc564dce6f 349 SUPERFAMILY SSF46689 294 339 2.42E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_07115 c461b5b40657cfc32cad2e583263df4d 288 Gene3D G3DSA:3.40.50.1860 22 264 6.0E-76 T 11-10-2018 AYJ52_07115 c461b5b40657cfc32cad2e583263df4d 288 SUPERFAMILY SSF53681 22 125 1.44E-34 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_07115 c461b5b40657cfc32cad2e583263df4d 288 Pfam PF01177 Asp/Glu/Hydantoin racemase 23 235 3.7E-30 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_07115 c461b5b40657cfc32cad2e583263df4d 288 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_07115 c461b5b40657cfc32cad2e583263df4d 288 Hamap MF_00258 Glutamate racemase [murI]. 21 279 34.064 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_07115 c461b5b40657cfc32cad2e583263df4d 288 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 87 95 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_07115 c461b5b40657cfc32cad2e583263df4d 288 SUPERFAMILY SSF53681 127 267 1.13E-28 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_07115 c461b5b40657cfc32cad2e583263df4d 288 TIGRFAM TIGR00067 glut_race: glutamate racemase 23 263 1.5E-65 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AYJ52_07115 c461b5b40657cfc32cad2e583263df4d 288 Gene3D G3DSA:3.40.50.1860 114 227 6.0E-76 T 11-10-2018 AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 1.1E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 1.1E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 1.1E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 1.1E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 231 251 1.1E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 SUPERFAMILY SSF51735 12 269 9.55E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 5.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 5.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 5.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 268 5.3E-63 T 11-10-2018 AYJ52_18000 530f84abd28a4cb111988f354350ef49 272 Gene3D G3DSA:3.40.50.720 2 272 7.6E-87 T 11-10-2018 AYJ52_18425 3c36481b61a4251e989903d33527a71d 439 Gene3D G3DSA:3.40.710.10 14 279 3.8E-79 T 11-10-2018 AYJ52_18425 3c36481b61a4251e989903d33527a71d 439 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 241 3.4E-63 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AYJ52_18425 3c36481b61a4251e989903d33527a71d 439 SUPERFAMILY SSF56601 3 278 1.17E-67 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_18425 3c36481b61a4251e989903d33527a71d 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 7.4E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AYJ52_18425 3c36481b61a4251e989903d33527a71d 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 7.4E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AYJ52_18425 3c36481b61a4251e989903d33527a71d 439 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 7.4E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AYJ52_06055 6951255387038b255e4ef9c3e646a695 207 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 23 197 8.6E-61 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AYJ52_06055 6951255387038b255e4ef9c3e646a695 207 Pfam PF03641 Possible lysine decarboxylase 66 193 9.0E-42 T 11-10-2018 IPR031100 LOG family AYJ52_06055 6951255387038b255e4ef9c3e646a695 207 Gene3D G3DSA:3.40.50.450 23 206 9.0E-71 T 11-10-2018 AYJ52_06055 6951255387038b255e4ef9c3e646a695 207 SUPERFAMILY SSF102405 20 198 7.94E-61 T 11-10-2018 AYJ52_17885 285ae4ec16dcb2fc689870192e2f511b 313 Gene3D G3DSA:1.10.3470.10 1 313 6.2E-61 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AYJ52_17885 285ae4ec16dcb2fc689870192e2f511b 313 Pfam PF01032 FecCD transport family 9 310 1.3E-63 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AYJ52_17885 285ae4ec16dcb2fc689870192e2f511b 313 SUPERFAMILY SSF81345 4 310 3.01E-64 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 Pfam PF00106 short chain dehydrogenase 10 195 4.0E-51 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 Gene3D G3DSA:3.40.50.720 1 268 6.4E-66 T 11-10-2018 AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 SUPERFAMILY SSF51735 6 263 4.38E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.1E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.1E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.1E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.1E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.1E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 193 2.9E-4 T 11-10-2018 AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 2.7E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.7E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_00945 89da12fb227cd9877136ff940980cd97 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 2.7E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 Pfam PF01134 Glucose inhibited division protein A 8 398 4.8E-165 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 Gene3D G3DSA:1.10.150.570 566 619 1.6E-21 T 11-10-2018 AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 621 41.703 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 618 5.1E-272 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 Gene3D G3DSA:3.50.50.60 301 458 1.3E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 Gene3D G3DSA:3.50.50.60 2 219 5.1E-87 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 SMART SM01228 543 614 1.5E-40 T 11-10-2018 AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 Pfam PF13932 GidA associated domain 402 612 3.2E-74 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 SUPERFAMILY SSF51905 7 261 1.99E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_16780 3777d94e23d2d6c5359a84c99d8d2209 626 Gene3D G3DSA:1.10.10.1800 459 547 4.1E-23 T 11-10-2018 AYJ52_13480 fd1acf0bbbe36fb366f586dcd778f338 126 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_13480 fd1acf0bbbe36fb366f586dcd778f338 126 Pfam PF02501 Type II secretion system (T2SS), protein I 42 103 5.8E-9 T 11-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AYJ52_13480 fd1acf0bbbe36fb366f586dcd778f338 126 TIGRFAM TIGR01707 gspI: type II secretion system protein I 5 100 2.2E-14 T 11-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AYJ52_13480 fd1acf0bbbe36fb366f586dcd778f338 126 Gene3D G3DSA:3.30.1300.30 33 120 3.4E-10 T 11-10-2018 AYJ52_13480 fd1acf0bbbe36fb366f586dcd778f338 126 SUPERFAMILY SSF54523 42 119 2.83E-13 T 11-10-2018 AYJ52_13480 fd1acf0bbbe36fb366f586dcd778f338 126 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 3.1E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_13480 fd1acf0bbbe36fb366f586dcd778f338 126 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AYJ52_19345 ffc9ed0a048b83a7402bf19ae46fba8e 270 SUPERFAMILY SSF140931 52 225 2.88E-21 T 11-10-2018 IPR036597 Fido-like domain superfamily AYJ52_19345 ffc9ed0a048b83a7402bf19ae46fba8e 270 Pfam PF02661 Fic/DOC family 59 166 3.5E-12 T 11-10-2018 IPR003812 Fido domain AYJ52_19345 ffc9ed0a048b83a7402bf19ae46fba8e 270 Gene3D G3DSA:1.10.3290.10 1 232 1.1E-56 T 11-10-2018 IPR036597 Fido-like domain superfamily AYJ52_05085 6ddbd4c7d88eb569d94ef6521b7803fe 185 Gene3D G3DSA:2.40.100.10 19 181 8.7E-63 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AYJ52_05085 6ddbd4c7d88eb569d94ef6521b7803fe 185 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AYJ52_05085 6ddbd4c7d88eb569d94ef6521b7803fe 185 PIRSF PIRSF001467 9 182 2.5E-30 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AYJ52_05085 6ddbd4c7d88eb569d94ef6521b7803fe 185 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 178 1.8E-48 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AYJ52_05085 6ddbd4c7d88eb569d94ef6521b7803fe 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 4.7E-14 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AYJ52_05085 6ddbd4c7d88eb569d94ef6521b7803fe 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 4.7E-14 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AYJ52_05085 6ddbd4c7d88eb569d94ef6521b7803fe 185 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 4.7E-14 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AYJ52_05085 6ddbd4c7d88eb569d94ef6521b7803fe 185 SUPERFAMILY SSF50891 19 179 1.08E-58 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AYJ52_08580 2d682f36cea8c1af1fcdc9d2c1438026 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 5.2E-36 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AYJ52_08580 2d682f36cea8c1af1fcdc9d2c1438026 108 SUPERFAMILY SSF52833 4 107 1.18E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_08580 2d682f36cea8c1af1fcdc9d2c1438026 108 Pfam PF00085 Thioredoxin 5 106 1.6E-34 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AYJ52_08580 2d682f36cea8c1af1fcdc9d2c1438026 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AYJ52_08580 2d682f36cea8c1af1fcdc9d2c1438026 108 PIRSF PIRSF000077 2 108 6.5E-39 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AYJ52_08580 2d682f36cea8c1af1fcdc9d2c1438026 108 PRINTS PR00421 Thioredoxin family signature 32 41 2.4E-7 T 11-10-2018 AYJ52_08580 2d682f36cea8c1af1fcdc9d2c1438026 108 PRINTS PR00421 Thioredoxin family signature 72 83 2.4E-7 T 11-10-2018 AYJ52_08580 2d682f36cea8c1af1fcdc9d2c1438026 108 PRINTS PR00421 Thioredoxin family signature 24 32 2.4E-7 T 11-10-2018 AYJ52_08580 2d682f36cea8c1af1fcdc9d2c1438026 108 Gene3D G3DSA:3.40.30.10 1 108 1.5E-34 T 11-10-2018 AYJ52_09365 525ea6da36e0af3b4216072482089ba6 267 Pfam PF01925 Sulfite exporter TauE/SafE 7 259 1.2E-52 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AYJ52_14985 2ad3c256cf963fbbd2af70b79eb5d4c2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14985 2ad3c256cf963fbbd2af70b79eb5d4c2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14985 2ad3c256cf963fbbd2af70b79eb5d4c2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14985 2ad3c256cf963fbbd2af70b79eb5d4c2 304 SUPERFAMILY SSF46785 1 83 7.91E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14985 2ad3c256cf963fbbd2af70b79eb5d4c2 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.1E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14985 2ad3c256cf963fbbd2af70b79eb5d4c2 304 Gene3D G3DSA:3.40.190.10 92 293 7.2E-70 T 11-10-2018 AYJ52_14985 2ad3c256cf963fbbd2af70b79eb5d4c2 304 Gene3D G3DSA:3.40.190.10 162 268 7.2E-70 T 11-10-2018 AYJ52_14985 2ad3c256cf963fbbd2af70b79eb5d4c2 304 Gene3D G3DSA:1.10.10.10 1 91 8.0E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14985 2ad3c256cf963fbbd2af70b79eb5d4c2 304 Pfam PF03466 LysR substrate binding domain 90 289 2.3E-28 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14985 2ad3c256cf963fbbd2af70b79eb5d4c2 304 SUPERFAMILY SSF53850 90 295 5.97E-26 T 11-10-2018 AYJ52_10280 0ad4d8e654afa8ef267182be6f043786 283 Gene3D G3DSA:3.40.50.970 6 281 4.9E-86 T 11-10-2018 AYJ52_10280 0ad4d8e654afa8ef267182be6f043786 283 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 21 269 4.8E-39 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AYJ52_10280 0ad4d8e654afa8ef267182be6f043786 283 SUPERFAMILY SSF52518 11 277 1.46E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_17230 fc4b0a91c732bcb1f52d552eff4ec3c1 191 Gene3D G3DSA:3.40.109.10 9 188 1.0E-35 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_17230 fc4b0a91c732bcb1f52d552eff4ec3c1 191 PIRSF PIRSF000232 4 191 5.0E-64 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AYJ52_17230 fc4b0a91c732bcb1f52d552eff4ec3c1 191 Pfam PF00881 Nitroreductase family 13 168 1.4E-22 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AYJ52_17230 fc4b0a91c732bcb1f52d552eff4ec3c1 191 SUPERFAMILY SSF55469 11 187 5.76E-30 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_02070 21ff8782c803b21d9bcbfb39acce97fb 100 Gene3D G3DSA:3.30.70.1060 1 97 2.9E-31 T 11-10-2018 AYJ52_02070 21ff8782c803b21d9bcbfb39acce97fb 100 SUPERFAMILY SSF54909 1 96 1.39E-26 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_02070 21ff8782c803b21d9bcbfb39acce97fb 100 Pfam PF03795 YCII-related domain 3 94 5.2E-21 T 11-10-2018 IPR005545 YCII-related AYJ52_12720 b85d332536d5b1af076c4044b20a4ec7 275 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 13 274 8.6E-98 T 11-10-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 AYJ52_12720 b85d332536d5b1af076c4044b20a4ec7 275 Gene3D G3DSA:3.90.226.10 6 264 4.1E-26 T 11-10-2018 AYJ52_12720 b85d332536d5b1af076c4044b20a4ec7 275 SUPERFAMILY SSF52096 25 216 9.95E-20 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_12720 b85d332536d5b1af076c4044b20a4ec7 275 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 17 274 5.6E-92 T 11-10-2018 AYJ52_06025 bad7ce91fbefc80e840b20b751367f83 467 PIRSF PIRSF004548 1 466 2.8E-95 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AYJ52_06025 bad7ce91fbefc80e840b20b751367f83 467 Pfam PF06123 Inner membrane protein CreD 8 460 3.3E-106 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AYJ52_01715 1af7e910e321e8aac0da93c313758850 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.3E-134 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_01715 1af7e910e321e8aac0da93c313758850 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AYJ52_01715 1af7e910e321e8aac0da93c313758850 401 Gene3D G3DSA:3.40.47.10 6 298 7.3E-146 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_01715 1af7e910e321e8aac0da93c313758850 401 Pfam PF00108 Thiolase, N-terminal domain 5 270 4.5E-49 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AYJ52_01715 1af7e910e321e8aac0da93c313758850 401 PIRSF PIRSF000429 1 401 1.6E-114 T 11-10-2018 IPR002155 Thiolase GO:0016747 AYJ52_01715 1af7e910e321e8aac0da93c313758850 401 Gene3D G3DSA:3.40.47.10 125 396 7.3E-146 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_01715 1af7e910e321e8aac0da93c313758850 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AYJ52_01715 1af7e910e321e8aac0da93c313758850 401 Pfam PF02803 Thiolase, C-terminal domain 278 400 9.9E-48 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AYJ52_01715 1af7e910e321e8aac0da93c313758850 401 SUPERFAMILY SSF53901 4 401 2.55E-63 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AYJ52_01715 1af7e910e321e8aac0da93c313758850 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AYJ52_06555 4c4b6c797db79801fa8da57b0a033552 108 SUPERFAMILY SSF81273 66 108 4.71E-12 T 11-10-2018 AYJ52_06555 4c4b6c797db79801fa8da57b0a033552 108 SMART SM00528 63 108 1.0E-15 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AYJ52_06555 4c4b6c797db79801fa8da57b0a033552 108 Gene3D G3DSA:4.10.430.10 58 108 9.2E-19 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AYJ52_06555 4c4b6c797db79801fa8da57b0a033552 108 Pfam PF00816 H-NS histone family 12 101 4.0E-22 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AYJ52_17035 87445e2df2018bc7e62ab2f8c2a8fb21 363 SUPERFAMILY SSF159245 124 360 6.67E-6 T 11-10-2018 AYJ52_01820 614e8571c9e2d050b6978fed392b3320 409 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 13 402 52.132 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_01820 614e8571c9e2d050b6978fed392b3320 409 Gene3D G3DSA:3.40.50.1100 21 217 1.2E-184 T 11-10-2018 AYJ52_01820 614e8571c9e2d050b6978fed392b3320 409 PIRSF PIRSF001413 2 408 2.0E-166 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_01820 614e8571c9e2d050b6978fed392b3320 409 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 18 400 2.0E-190 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_01820 614e8571c9e2d050b6978fed392b3320 409 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 389 9.3E-47 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_01820 614e8571c9e2d050b6978fed392b3320 409 Gene3D G3DSA:3.40.50.1100 65 395 1.2E-184 T 11-10-2018 AYJ52_01820 614e8571c9e2d050b6978fed392b3320 409 SUPERFAMILY SSF53686 14 399 9.82E-149 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_01820 614e8571c9e2d050b6978fed392b3320 409 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 92 106 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 ProSitePatterns PS00079 Multicopper oxidases signature 1. 584 604 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 SUPERFAMILY SSF49503 459 606 2.39E-35 T 11-10-2018 IPR008972 Cupredoxin AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 Gene3D G3DSA:2.60.40.420 19 144 4.8E-36 T 11-10-2018 IPR008972 Cupredoxin AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 Pfam PF07732 Multicopper oxidase 32 145 7.9E-34 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 Pfam PF00394 Multicopper oxidase 159 332 2.9E-28 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 25 606 3.3E-191 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 SUPERFAMILY SSF49503 15 149 1.79E-33 T 11-10-2018 IPR008972 Cupredoxin AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 SUPERFAMILY SSF49503 156 361 1.11E-44 T 11-10-2018 IPR008972 Cupredoxin AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 Gene3D G3DSA:2.60.40.420 156 361 1.5E-39 T 11-10-2018 IPR008972 Cupredoxin AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 ProSitePatterns PS00080 Multicopper oxidases signature 2. 589 600 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AYJ52_08820 5195c3145eb12d4d29f3b70d13bae378 635 Pfam PF07731 Multicopper oxidase 494 607 2.3E-26 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 Pfam PF00230 Major intrinsic protein 2 221 1.3E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 4.2E-58 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 SUPERFAMILY SSF81338 2 225 2.62E-66 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 PRINTS PR00783 Major intrinsic protein family signature 135 153 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 PRINTS PR00783 Major intrinsic protein family signature 42 66 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 PRINTS PR00783 Major intrinsic protein family signature 165 187 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 PRINTS PR00783 Major intrinsic protein family signature 79 98 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 PRINTS PR00783 Major intrinsic protein family signature 204 224 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.6E-52 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 Gene3D G3DSA:1.20.1080.10 1 229 3.4E-83 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 33.945 T 11-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AYJ52_03575 4dd1287a8ff57b36772c1038267772b1 229 ProSitePatterns PS00221 MIP family signature. 60 68 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AYJ52_01915 ad7389545a4303b1ecd73601bb58030c 254 Pfam PF13803 Domain of unknown function (DUF4184) 1 212 7.9E-43 T 11-10-2018 IPR025238 Protein of unknown function DUF4184 AYJ52_03715 fd09c4a11473f1368ed3c794f2ffb464 306 Gene3D G3DSA:3.40.190.10 164 271 5.8E-52 T 11-10-2018 AYJ52_03715 fd09c4a11473f1368ed3c794f2ffb464 306 SUPERFAMILY SSF53850 88 292 2.17E-30 T 11-10-2018 AYJ52_03715 fd09c4a11473f1368ed3c794f2ffb464 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_03715 fd09c4a11473f1368ed3c794f2ffb464 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_03715 fd09c4a11473f1368ed3c794f2ffb464 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_03715 fd09c4a11473f1368ed3c794f2ffb464 306 Gene3D G3DSA:3.40.190.10 91 288 5.8E-52 T 11-10-2018 AYJ52_03715 fd09c4a11473f1368ed3c794f2ffb464 306 SUPERFAMILY SSF46785 1 86 5.13E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_03715 fd09c4a11473f1368ed3c794f2ffb464 306 Gene3D G3DSA:1.10.10.10 1 90 1.0E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_03715 fd09c4a11473f1368ed3c794f2ffb464 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.0E-25 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_03715 fd09c4a11473f1368ed3c794f2ffb464 306 Pfam PF03466 LysR substrate binding domain 87 283 2.1E-33 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_13365 f3184aa0075db9b4c01f5a80f9d446c5 387 Gene3D G3DSA:2.60.120.650 1 213 1.1E-72 T 11-10-2018 AYJ52_13365 f3184aa0075db9b4c01f5a80f9d446c5 387 SMART SM00558 81 228 1.7E-9 T 11-10-2018 IPR003347 JmjC domain AYJ52_13365 f3184aa0075db9b4c01f5a80f9d446c5 387 Pfam PF08007 Cupin superfamily protein 14 311 3.7E-88 T 11-10-2018 IPR003347 JmjC domain AYJ52_13365 f3184aa0075db9b4c01f5a80f9d446c5 387 SUPERFAMILY SSF51197 5 297 1.03E-62 T 11-10-2018 AYJ52_13365 f3184aa0075db9b4c01f5a80f9d446c5 387 Gene3D G3DSA:1.10.10.2510 214 382 2.4E-13 T 11-10-2018 AYJ52_08750 b000f796892ea1577e1dca1684fbdea2 554 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 21 553 1.1E-71 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AYJ52_08750 b000f796892ea1577e1dca1684fbdea2 554 SUPERFAMILY SSF56935 31 552 3.52E-51 T 11-10-2018 AYJ52_08750 b000f796892ea1577e1dca1684fbdea2 554 Gene3D G3DSA:2.40.160.60 131 554 5.9E-56 T 11-10-2018 AYJ52_08080 ef5d3070d205934f0abe21a79cd2e7e1 346 SUPERFAMILY SSF52980 37 221 1.77E-30 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AYJ52_08080 ef5d3070d205934f0abe21a79cd2e7e1 346 Pfam PF09588 YqaJ-like viral recombinase domain 38 179 6.9E-36 T 11-10-2018 IPR019080 YqaJ viral recombinase AYJ52_08080 ef5d3070d205934f0abe21a79cd2e7e1 346 Gene3D G3DSA:3.90.320.10 35 243 1.9E-36 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AYJ52_08080 ef5d3070d205934f0abe21a79cd2e7e1 346 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 33 189 5.1E-39 T 11-10-2018 IPR017482 Putative phage-type endonuclease AYJ52_03890 f71dbec862140f611e0eb0cb8b7ffc2a 195 Gene3D G3DSA:2.40.50.140 1 122 1.2E-43 T 11-10-2018 AYJ52_03890 f71dbec862140f611e0eb0cb8b7ffc2a 195 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 195 1.0E-50 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AYJ52_03890 f71dbec862140f611e0eb0cb8b7ffc2a 195 SUPERFAMILY SSF50249 2 195 2.26E-50 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_03890 f71dbec862140f611e0eb0cb8b7ffc2a 195 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 34.812 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AYJ52_03890 f71dbec862140f611e0eb0cb8b7ffc2a 195 Pfam PF00436 Single-strand binding protein family 4 108 2.2E-38 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AYJ52_03935 a39c1d94e7fff6a2ab2b8db0bc0ae110 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 2.4E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_03935 a39c1d94e7fff6a2ab2b8db0bc0ae110 200 Gene3D G3DSA:1.10.357.10 1 200 1.1E-71 T 11-10-2018 AYJ52_03935 a39c1d94e7fff6a2ab2b8db0bc0ae110 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 5.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_03935 a39c1d94e7fff6a2ab2b8db0bc0ae110 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 5.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_03935 a39c1d94e7fff6a2ab2b8db0bc0ae110 200 Pfam PF16925 Bacterial transcriptional repressor C-terminal 102 193 2.1E-12 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AYJ52_03935 a39c1d94e7fff6a2ab2b8db0bc0ae110 200 SUPERFAMILY SSF48498 82 196 1.28E-23 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_03935 a39c1d94e7fff6a2ab2b8db0bc0ae110 200 SUPERFAMILY SSF46689 3 78 5.13E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_10395 bc060bf8dcdcd3f60b92f8972e5f82e1 314 Pfam PF00561 alpha/beta hydrolase fold 40 163 2.2E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10395 bc060bf8dcdcd3f60b92f8972e5f82e1 314 SUPERFAMILY SSF53474 6 311 1.27E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10395 bc060bf8dcdcd3f60b92f8972e5f82e1 314 Gene3D G3DSA:3.40.50.1820 23 309 2.7E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_08705 a369f94d9cd9bf9e12c2dcd85726b126 83 SUPERFAMILY SSF82657 2 78 7.06E-23 T 11-10-2018 IPR036065 BolA-like superfamily AYJ52_08705 a369f94d9cd9bf9e12c2dcd85726b126 83 Pfam PF01722 BolA-like protein 20 74 1.2E-12 T 11-10-2018 IPR002634 BolA protein AYJ52_08705 a369f94d9cd9bf9e12c2dcd85726b126 83 PIRSF PIRSF003113 1 82 8.0E-21 T 11-10-2018 IPR002634 BolA protein AYJ52_08705 a369f94d9cd9bf9e12c2dcd85726b126 83 Gene3D G3DSA:3.30.300.90 1 82 2.0E-25 T 11-10-2018 AYJ52_10690 6d1705ea873cfa4ead3c6d76a45bf799 459 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 234 439 6.2E-56 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_10690 6d1705ea873cfa4ead3c6d76a45bf799 459 SUPERFAMILY SSF53098 226 402 3.04E-47 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_10690 6d1705ea873cfa4ead3c6d76a45bf799 459 SMART SM00479 232 402 1.2E-37 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_10690 6d1705ea873cfa4ead3c6d76a45bf799 459 SUPERFAMILY SSF53098 4 138 3.9E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_10690 6d1705ea873cfa4ead3c6d76a45bf799 459 Gene3D G3DSA:3.30.420.10 1 159 1.9E-53 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_10690 6d1705ea873cfa4ead3c6d76a45bf799 459 Pfam PF00075 RNase H 4 136 7.7E-42 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AYJ52_10690 6d1705ea873cfa4ead3c6d76a45bf799 459 Hamap MF_00042 Ribonuclease H [rnhA]. 2 145 27.457 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 AYJ52_10690 6d1705ea873cfa4ead3c6d76a45bf799 459 Gene3D G3DSA:3.30.420.10 226 406 3.2E-48 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_10690 6d1705ea873cfa4ead3c6d76a45bf799 459 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 232 451 2.5E-77 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_10690 6d1705ea873cfa4ead3c6d76a45bf799 459 Pfam PF00929 Exonuclease 234 393 7.9E-29 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_14030 d9ce9b4627a1076170067a3aace56cd7 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 70 84 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AYJ52_14030 d9ce9b4627a1076170067a3aace56cd7 352 SUPERFAMILY SSF51735 148 316 3.27E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14030 d9ce9b4627a1076170067a3aace56cd7 352 SUPERFAMILY SSF50129 1 181 7.0E-41 T 11-10-2018 IPR011032 GroES-like superfamily AYJ52_14030 d9ce9b4627a1076170067a3aace56cd7 352 Gene3D G3DSA:3.90.180.10 10 336 3.2E-91 T 11-10-2018 AYJ52_14030 d9ce9b4627a1076170067a3aace56cd7 352 Pfam PF00107 Zinc-binding dehydrogenase 184 311 1.4E-26 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AYJ52_14030 d9ce9b4627a1076170067a3aace56cd7 352 SMART SM00829 10 350 0.0031 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AYJ52_14030 d9ce9b4627a1076170067a3aace56cd7 352 Gene3D G3DSA:3.40.50.720 161 297 3.2E-91 T 11-10-2018 AYJ52_14030 d9ce9b4627a1076170067a3aace56cd7 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 1.3E-21 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AYJ52_15375 9e0260fc8e59cc77b570c11713a54d06 216 SUPERFAMILY SSF116726 131 214 6.8E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AYJ52_15375 9e0260fc8e59cc77b570c11713a54d06 216 Gene3D G3DSA:3.40.50.720 2 137 1.5E-35 T 11-10-2018 AYJ52_15375 9e0260fc8e59cc77b570c11713a54d06 216 SUPERFAMILY SSF51735 3 133 4.7E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_15375 9e0260fc8e59cc77b570c11713a54d06 216 Gene3D G3DSA:3.30.70.1450 138 213 7.1E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AYJ52_15375 9e0260fc8e59cc77b570c11713a54d06 216 Pfam PF02254 TrkA-N domain 4 119 2.9E-28 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 Pfam PF13500 AAA domain 3 227 1.3E-22 T 11-10-2018 AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 Gene3D G3DSA:3.40.1390.20 223 366 2.0E-10 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 Pfam PF07085 DRTGG domain 233 344 9.9E-20 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 SUPERFAMILY SSF52540 1 238 9.29E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 Gene3D G3DSA:3.40.50.10750 527 680 9.3E-130 T 11-10-2018 AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 SUPERFAMILY SSF75138 229 352 7.85E-17 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 Gene3D G3DSA:3.40.50.10950 398 707 9.3E-130 T 11-10-2018 AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 405 704 1.7E-126 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 SUPERFAMILY SSF53659 392 708 6.72E-88 T 11-10-2018 AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 Gene3D G3DSA:3.40.50.300 3 197 8.6E-10 T 11-10-2018 AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 PIRSF PIRSF006107 1 712 0.0 T 11-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AYJ52_07640 4161df3e53b1ae6ed5756a95e8e9f19e 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 390 704 1.6E-117 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AYJ52_09800 7b251a4e4350345b002e3c5bd64cd724 150 Pfam PF00692 dUTPase 15 148 1.1E-38 T 11-10-2018 IPR029054 dUTPase-like AYJ52_09800 7b251a4e4350345b002e3c5bd64cd724 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 149 33.512 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AYJ52_09800 7b251a4e4350345b002e3c5bd64cd724 150 SUPERFAMILY SSF51283 2 149 7.46E-54 T 11-10-2018 IPR036157 dUTPase-like superfamily AYJ52_09800 7b251a4e4350345b002e3c5bd64cd724 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 9 149 7.2E-49 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AYJ52_09800 7b251a4e4350345b002e3c5bd64cd724 150 Gene3D G3DSA:2.70.40.10 1 150 3.2E-54 T 11-10-2018 IPR036157 dUTPase-like superfamily AYJ52_15675 24fbf7dc3bbecc452d135961e9c0694a 451 SUPERFAMILY SSF50156 89 192 6.7E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AYJ52_15675 24fbf7dc3bbecc452d135961e9c0694a 451 Gene3D G3DSA:2.30.42.10 219 309 8.0E-15 T 11-10-2018 AYJ52_15675 24fbf7dc3bbecc452d135961e9c0694a 451 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 451 1.6E-116 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AYJ52_15675 24fbf7dc3bbecc452d135961e9c0694a 451 SMART SM00228 116 187 4.0E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_15675 24fbf7dc3bbecc452d135961e9c0694a 451 SMART SM00228 209 278 9.0E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_15675 24fbf7dc3bbecc452d135961e9c0694a 451 SUPERFAMILY SSF50156 204 288 3.29E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AYJ52_15675 24fbf7dc3bbecc452d135961e9c0694a 451 Gene3D G3DSA:2.30.42.10 127 218 3.3E-21 T 11-10-2018 AYJ52_15675 24fbf7dc3bbecc452d135961e9c0694a 451 Pfam PF13180 PDZ domain 222 285 1.2E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_15675 24fbf7dc3bbecc452d135961e9c0694a 451 Pfam PF13180 PDZ domain 127 189 3.2E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AYJ52_15675 24fbf7dc3bbecc452d135961e9c0694a 451 Pfam PF02163 Peptidase family M50 10 436 4.0E-78 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AYJ52_08955 9cf78a7b537fe5a7c6f9161ca1de5123 147 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 10 142 5.5E-17 T 11-10-2018 IPR009936 Protein of unknown function DUF1468 AYJ52_16130 fcf348dcbdf92b891ba80e62d6f48b4b 391 Pfam PF03594 Benzoate membrane transport protein 6 383 8.6E-129 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AYJ52_16130 fcf348dcbdf92b891ba80e62d6f48b4b 391 TIGRFAM TIGR00843 benE: benzoate transporter 8 384 7.4E-114 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AYJ52_16745 94cdd22ff340fa5d619656639f72b036 481 Pfam PF00772 DnaB-like helicase N terminal domain 31 133 7.8E-29 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AYJ52_16745 94cdd22ff340fa5d619656639f72b036 481 Gene3D G3DSA:1.10.860.10 24 187 5.3E-43 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AYJ52_16745 94cdd22ff340fa5d619656639f72b036 481 SUPERFAMILY SSF52540 210 461 1.83E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16745 94cdd22ff340fa5d619656639f72b036 481 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 31 470 6.4E-164 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AYJ52_16745 94cdd22ff340fa5d619656639f72b036 481 SUPERFAMILY SSF48024 29 141 7.06E-30 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AYJ52_16745 94cdd22ff340fa5d619656639f72b036 481 Gene3D G3DSA:3.40.50.300 189 475 5.4E-102 T 11-10-2018 AYJ52_16745 94cdd22ff340fa5d619656639f72b036 481 Pfam PF03796 DnaB-like helicase C terminal domain 212 468 2.7E-108 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AYJ52_10065 1276f385666e891de494a883dd9c2cd8 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 1.6E-177 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_10065 1276f385666e891de494a883dd9c2cd8 490 SUPERFAMILY SSF53720 4 484 5.24E-171 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_10065 1276f385666e891de494a883dd9c2cd8 490 Gene3D G3DSA:3.40.605.10 3 254 1.2E-104 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_10065 1276f385666e891de494a883dd9c2cd8 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 8.4E-226 T 11-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AYJ52_10065 1276f385666e891de494a883dd9c2cd8 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_10065 1276f385666e891de494a883dd9c2cd8 490 Gene3D G3DSA:3.40.309.10 255 486 5.2E-79 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_10065 1276f385666e891de494a883dd9c2cd8 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_10065 1276f385666e891de494a883dd9c2cd8 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.744 T 11-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 SMART SM00304 206 259 2.4E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 Gene3D G3DSA:1.10.287.130 203 313 1.4E-19 T 11-10-2018 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 Pfam PF00672 HAMP domain 206 251 1.7E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 SMART SM00388 260 318 9.3E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 SMART SM00387 354 462 6.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 1.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 1.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 SUPERFAMILY SSF55874 315 464 2.23E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 310 2.0E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 SUPERFAMILY SSF47384 244 316 2.35E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 460 4.4E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_03465 80cd380dfe2d50f3fa5e03dfcd383888 485 Gene3D G3DSA:3.30.565.10 320 470 1.4E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_10275 4db0ae81a99897943972000fc85e046a 433 Pfam PF07690 Major Facilitator Superfamily 29 389 9.4E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_10275 4db0ae81a99897943972000fc85e046a 433 Gene3D G3DSA:1.20.1250.20 5 430 6.4E-82 T 11-10-2018 AYJ52_10275 4db0ae81a99897943972000fc85e046a 433 SUPERFAMILY SSF103473 8 427 7.46E-82 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_00705 cbe97cd878fd65a443b8d0ddda559af6 500 Gene3D G3DSA:1.20.1530.20 2 418 2.2E-8 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AYJ52_00705 cbe97cd878fd65a443b8d0ddda559af6 500 Pfam PF00999 Sodium/hydrogen exchanger family 16 417 3.8E-36 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AYJ52_03910 c6d54e4c05ef96baf5b7beb1dc43be1b 123 SMART SM00422 1 69 5.4E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_03910 c6d54e4c05ef96baf5b7beb1dc43be1b 123 Pfam PF13411 MerR HTH family regulatory protein 2 62 3.3E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_03910 c6d54e4c05ef96baf5b7beb1dc43be1b 123 SUPERFAMILY SSF46955 1 110 1.06E-23 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_03910 c6d54e4c05ef96baf5b7beb1dc43be1b 123 Gene3D G3DSA:1.10.1660.10 1 115 6.1E-26 T 11-10-2018 AYJ52_03910 c6d54e4c05ef96baf5b7beb1dc43be1b 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.8E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_03910 c6d54e4c05ef96baf5b7beb1dc43be1b 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.8E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_03910 c6d54e4c05ef96baf5b7beb1dc43be1b 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.8E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_06405 7aad544117c7f68675a93487cfad8359 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 3.2E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_06405 7aad544117c7f68675a93487cfad8359 211 SUPERFAMILY SSF52172 3 176 2.13E-34 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_06405 7aad544117c7f68675a93487cfad8359 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_06405 7aad544117c7f68675a93487cfad8359 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_06405 7aad544117c7f68675a93487cfad8359 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.9E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_06405 7aad544117c7f68675a93487cfad8359 211 Pfam PF00072 Response regulator receiver domain 4 116 5.6E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_06405 7aad544117c7f68675a93487cfad8359 211 Gene3D G3DSA:3.40.50.12740 2 209 2.9E-61 T 11-10-2018 AYJ52_06405 7aad544117c7f68675a93487cfad8359 211 SMART SM00421 146 203 4.7E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_06405 7aad544117c7f68675a93487cfad8359 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AYJ52_06405 7aad544117c7f68675a93487cfad8359 211 SMART SM00448 2 115 1.7E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_16225 d105cb09842a9c509ddbddfd9a0da146 124 Gene3D G3DSA:3.30.1150.10 26 122 7.5E-17 T 11-10-2018 AYJ52_16225 d105cb09842a9c509ddbddfd9a0da146 124 SUPERFAMILY SSF74653 36 123 1.26E-6 T 11-10-2018 AYJ52_16225 d105cb09842a9c509ddbddfd9a0da146 124 Pfam PF13103 TonB C terminal 38 119 2.0E-7 T 11-10-2018 AYJ52_09375 57dc6d25588b1d98276e03b10f63e042 1149 PIRSF PIRSF005719 1 1143 8.6E-231 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein AYJ52_09375 57dc6d25588b1d98276e03b10f63e042 1149 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1137 2.8E-274 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AYJ52_09375 57dc6d25588b1d98276e03b10f63e042 1149 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1139 21.326 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AYJ52_09375 57dc6d25588b1d98276e03b10f63e042 1149 SUPERFAMILY SSF52540 1 1122 1.28E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09375 57dc6d25588b1d98276e03b10f63e042 1149 Gene3D G3DSA:3.40.50.300 1 267 8.5E-53 T 11-10-2018 AYJ52_09375 57dc6d25588b1d98276e03b10f63e042 1149 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1130 3.5E-54 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AYJ52_09375 57dc6d25588b1d98276e03b10f63e042 1149 Gene3D G3DSA:3.40.50.300 920 1144 6.2E-47 T 11-10-2018 AYJ52_09375 57dc6d25588b1d98276e03b10f63e042 1149 SUPERFAMILY SSF75553 471 626 4.97E-5 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 AYJ52_06970 ab1e18603ec6257c08f850608d1aec80 539 Pfam PF03109 ABC1 family 113 231 2.5E-33 T 11-10-2018 IPR004147 UbiB domain AYJ52_06970 ab1e18603ec6257c08f850608d1aec80 539 SUPERFAMILY SSF56112 95 435 6.53E-24 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_15735 c94bfc27b84e58472eab64074717f520 163 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.664 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AYJ52_15735 c94bfc27b84e58472eab64074717f520 163 SUPERFAMILY SSF69765 4 160 2.75E-65 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AYJ52_15735 c94bfc27b84e58472eab64074717f520 163 Gene3D G3DSA:3.30.1330.50 2 163 5.4E-68 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AYJ52_15735 c94bfc27b84e58472eab64074717f520 163 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AYJ52_15735 c94bfc27b84e58472eab64074717f520 163 Pfam PF02542 YgbB family 5 158 1.0E-66 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AYJ52_15735 c94bfc27b84e58472eab64074717f520 163 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 6.2E-67 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 Gene3D G3DSA:3.30.930.10 160 509 4.6E-128 T 11-10-2018 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 20 506 9.0E-198 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 264 281 2.0E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 217 233 2.0E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 246 259 2.0E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 201 211 2.0E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 PRINTS PR00982 Lysyl-tRNA synthetase signature 389 405 2.0E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 SUPERFAMILY SSF55681 164 505 7.76E-116 T 11-10-2018 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 Gene3D G3DSA:2.40.50.140 8 159 8.2E-33 T 11-10-2018 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 SUPERFAMILY SSF50249 15 157 3.18E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 Pfam PF00152 tRNA synthetases class II (D, K and N) 165 504 9.7E-80 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 Pfam PF01336 OB-fold nucleic acid binding domain 75 148 2.4E-9 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AYJ52_10420 ba5151fcb702c4bed1ef95833f715698 509 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 22 507 43.627 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AYJ52_12110 98a3efa8a330379a9b5279bd6379f238 393 Gene3D G3DSA:1.20.1250.20 9 199 1.8E-11 T 11-10-2018 AYJ52_12110 98a3efa8a330379a9b5279bd6379f238 393 Gene3D G3DSA:1.20.1250.20 200 387 6.8E-24 T 11-10-2018 AYJ52_12110 98a3efa8a330379a9b5279bd6379f238 393 SUPERFAMILY SSF103473 10 386 4.45E-46 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_12110 98a3efa8a330379a9b5279bd6379f238 393 Pfam PF07690 Major Facilitator Superfamily 30 347 7.1E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_02985 83e8581674eb7951b475caa22fc6f49b 262 Pfam PF08241 Methyltransferase domain 49 136 3.7E-16 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AYJ52_02985 83e8581674eb7951b475caa22fc6f49b 262 SUPERFAMILY SSF53335 11 187 3.75E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_02985 83e8581674eb7951b475caa22fc6f49b 262 Gene3D G3DSA:3.40.50.150 11 242 1.1E-35 T 11-10-2018 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 138 150 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 Gene3D G3DSA:3.30.420.40 5 256 9.7E-112 T 11-10-2018 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 Gene3D G3DSA:3.30.420.40 257 502 1.4E-94 T 11-10-2018 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 PIRSF PIRSF000538 6 502 2.6E-181 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 453 1.6E-64 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 255 2.8E-90 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 SUPERFAMILY SSF53067 257 500 1.17E-85 T 11-10-2018 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 Hamap MF_00186 Glycerol kinase [glpK]. 6 500 59.411 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 7 499 2.6E-229 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AYJ52_00545 7574443f92b1d78ab79fe7776d9396e6 502 SUPERFAMILY SSF53067 7 258 2.2E-97 T 11-10-2018 AYJ52_00840 0cea9d9cc37864a9428f69fff266b77f 126 Gene3D G3DSA:1.10.10.10 1 122 1.3E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_00840 0cea9d9cc37864a9428f69fff266b77f 126 Pfam PF01638 HxlR-like helix-turn-helix 23 110 2.4E-23 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AYJ52_00840 0cea9d9cc37864a9428f69fff266b77f 126 SUPERFAMILY SSF46785 8 124 2.02E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_13290 504450cd8b8f475d344d195205a0be36 361 Gene3D G3DSA:3.40.50.150 7 357 3.6E-134 T 11-10-2018 AYJ52_13290 504450cd8b8f475d344d195205a0be36 361 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 343 353 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AYJ52_13290 504450cd8b8f475d344d195205a0be36 361 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 4 360 6.4E-168 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AYJ52_13290 504450cd8b8f475d344d195205a0be36 361 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 361 43.256 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AYJ52_13290 504450cd8b8f475d344d195205a0be36 361 Gene3D G3DSA:3.40.1350.30 39 182 3.6E-134 T 11-10-2018 AYJ52_13290 504450cd8b8f475d344d195205a0be36 361 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 5 360 8.2E-165 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AYJ52_13290 504450cd8b8f475d344d195205a0be36 361 SUPERFAMILY SSF53335 3 360 3.8E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_13290 504450cd8b8f475d344d195205a0be36 361 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 294 323 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AYJ52_14120 f3d7951c9c36ffd98e28a5f9ff1c6994 297 SUPERFAMILY SSF46785 4 81 5.51E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14120 f3d7951c9c36ffd98e28a5f9ff1c6994 297 Pfam PF03466 LysR substrate binding domain 97 293 3.4E-18 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14120 f3d7951c9c36ffd98e28a5f9ff1c6994 297 Gene3D G3DSA:3.40.190.10 168 266 3.6E-54 T 11-10-2018 AYJ52_14120 f3d7951c9c36ffd98e28a5f9ff1c6994 297 Gene3D G3DSA:1.10.10.10 1 84 1.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14120 f3d7951c9c36ffd98e28a5f9ff1c6994 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.0E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14120 f3d7951c9c36ffd98e28a5f9ff1c6994 297 SUPERFAMILY SSF53850 88 294 1.68E-36 T 11-10-2018 AYJ52_14120 f3d7951c9c36ffd98e28a5f9ff1c6994 297 Gene3D G3DSA:3.40.190.10 88 290 3.6E-54 T 11-10-2018 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.538 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 Gene3D G3DSA:3.40.50.800 4 557 8.3E-238 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 4.7E-48 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 Gene3D G3DSA:3.90.960.10 240 392 8.3E-238 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 SUPERFAMILY SSF55826 218 393 1.57E-23 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 PIRSF PIRSF001535 1 571 1.9E-264 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 Pfam PF03129 Anticodon binding domain 479 569 3.6E-19 T 11-10-2018 IPR004154 Anticodon-binding AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 2.5E-254 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 Gene3D G3DSA:3.30.930.10 11 468 8.3E-238 T 11-10-2018 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 SUPERFAMILY SSF52954 466 570 9.67E-30 T 11-10-2018 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 Pfam PF04073 Aminoacyl-tRNA editing domain 256 379 6.1E-21 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.7E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.7E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.7E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.7E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AYJ52_01510 1fa1777dfe451096500e511db80ff75b 571 SUPERFAMILY SSF55681 10 481 4.59E-105 T 11-10-2018 AYJ52_14905 8179f239509353c09a2955b0baa6f2b6 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_14905 8179f239509353c09a2955b0baa6f2b6 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_14905 8179f239509353c09a2955b0baa6f2b6 189 SUPERFAMILY SSF46689 3 77 1.05E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14905 8179f239509353c09a2955b0baa6f2b6 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 2.9E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_14905 8179f239509353c09a2955b0baa6f2b6 189 Gene3D G3DSA:1.10.357.10 1 189 5.9E-61 T 11-10-2018 AYJ52_05810 c2988f364440589ab317b4440cce8271 165 Gene3D G3DSA:3.30.1490.190 106 164 4.5E-13 T 11-10-2018 AYJ52_05810 c2988f364440589ab317b4440cce8271 165 SUPERFAMILY SSF46785 27 159 8.59E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_05810 c2988f364440589ab317b4440cce8271 165 Gene3D G3DSA:1.10.10.10 16 105 2.2E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_05810 c2988f364440589ab317b4440cce8271 165 Pfam PF01475 Ferric uptake regulator family 35 152 6.7E-10 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AYJ52_16290 3965610acb5d096685e8859a1fb43fa0 227 Pfam PF00106 short chain dehydrogenase 56 189 7.7E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_16290 3965610acb5d096685e8859a1fb43fa0 227 SUPERFAMILY SSF51735 59 188 9.89E-11 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_16290 3965610acb5d096685e8859a1fb43fa0 227 Gene3D G3DSA:3.40.50.720 3 208 6.6E-11 T 11-10-2018 AYJ52_12445 2571b5f38e93fbaee8049a5b335574a0 205 SUPERFAMILY SSF46689 8 89 4.99E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_12445 2571b5f38e93fbaee8049a5b335574a0 205 Gene3D G3DSA:1.10.357.10 10 200 4.6E-33 T 11-10-2018 AYJ52_12445 2571b5f38e93fbaee8049a5b335574a0 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 4.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_12445 2571b5f38e93fbaee8049a5b335574a0 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 4.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_12445 2571b5f38e93fbaee8049a5b335574a0 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 3.5E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_12445 2571b5f38e93fbaee8049a5b335574a0 205 SUPERFAMILY SSF48498 87 182 3.91E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_04220 d7d163e85e88b577cf8c35d20b562203 321 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 20 318 3.9E-144 T 11-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 AYJ52_04220 d7d163e85e88b577cf8c35d20b562203 321 SUPERFAMILY SSF88713 20 318 3.89E-79 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AYJ52_04220 d7d163e85e88b577cf8c35d20b562203 321 Gene3D G3DSA:3.20.20.370 13 321 1.9E-95 T 11-10-2018 AYJ52_04220 d7d163e85e88b577cf8c35d20b562203 321 Pfam PF01522 Polysaccharide deacetylase 88 176 2.9E-6 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AYJ52_12975 84eb16fa863a19020d1c23a89ccdbc12 240 Pfam PF03591 AzlC protein 18 158 9.1E-33 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease AYJ52_07060 f335aa7a6d7eff831b1616dc1c50bb14 742 Pfam PF00271 Helicase conserved C-terminal domain 533 599 9.6E-5 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_07060 f335aa7a6d7eff831b1616dc1c50bb14 742 Pfam PF04851 Type III restriction enzyme, res subunit 208 370 6.1E-15 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AYJ52_07060 f335aa7a6d7eff831b1616dc1c50bb14 742 Hamap MF_00983 Probable primosomal protein N' [priA]. 16 741 24.453 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AYJ52_07060 f335aa7a6d7eff831b1616dc1c50bb14 742 Gene3D G3DSA:3.40.50.300 198 389 5.2E-75 T 11-10-2018 AYJ52_07060 f335aa7a6d7eff831b1616dc1c50bb14 742 Gene3D G3DSA:1.10.8.630 13 125 5.4E-31 T 11-10-2018 AYJ52_07060 f335aa7a6d7eff831b1616dc1c50bb14 742 SMART SM00487 205 401 9.9E-20 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ52_07060 f335aa7a6d7eff831b1616dc1c50bb14 742 SMART SM00490 503 600 4.1E-6 T 11-10-2018 IPR001650 Helicase, C-terminal AYJ52_07060 f335aa7a6d7eff831b1616dc1c50bb14 742 SUPERFAMILY SSF52540 225 610 2.22E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_07060 f335aa7a6d7eff831b1616dc1c50bb14 742 TIGRFAM TIGR00595 priA: primosomal protein N' 231 738 8.8E-183 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AYJ52_13900 cc8d3fe0779510fa961441475480672e 395 Gene3D G3DSA:3.90.1150.10 261 395 2.7E-50 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_13900 cc8d3fe0779510fa961441475480672e 395 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 12 392 7.1E-175 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 AYJ52_13900 cc8d3fe0779510fa961441475480672e 395 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 13 393 52.875 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 AYJ52_13900 cc8d3fe0779510fa961441475480672e 395 SUPERFAMILY SSF53383 29 393 1.6E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_13900 cc8d3fe0779510fa961441475480672e 395 Gene3D G3DSA:3.40.640.10 6 258 2.5E-87 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_13900 cc8d3fe0779510fa961441475480672e 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AYJ52_13900 cc8d3fe0779510fa961441475480672e 395 PIRSF PIRSF001434 1 395 1.1E-130 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AYJ52_13900 cc8d3fe0779510fa961441475480672e 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 392 2.1E-137 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AYJ52_18345 5abc5f2787bf6988f1c17a801316fc1b 203 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 4 187 2.3E-48 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_18345 5abc5f2787bf6988f1c17a801316fc1b 203 Gene3D G3DSA:3.20.20.70 2 203 1.5E-49 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_18345 5abc5f2787bf6988f1c17a801316fc1b 203 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 2 203 21.98 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_18345 5abc5f2787bf6988f1c17a801316fc1b 203 SUPERFAMILY SSF51391 3 187 1.57E-49 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_18345 5abc5f2787bf6988f1c17a801316fc1b 203 Pfam PF02581 Thiamine monophosphate synthase 4 183 6.0E-52 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AYJ52_04265 860308b30a8c9a835548b2bd5990ceef 193 Gene3D G3DSA:3.40.50.1820 1 192 1.2E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04265 860308b30a8c9a835548b2bd5990ceef 193 SUPERFAMILY SSF53474 3 191 3.93E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04265 860308b30a8c9a835548b2bd5990ceef 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 3 188 1.8E-39 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AYJ52_11425 06d27f82e817637fde3a68dbd442c150 118 Pfam PF03860 Domain of Unknown Function (DUF326) 96 115 1.4E-5 T 11-10-2018 IPR005560 Protein of unknown function DUF326 AYJ52_11425 06d27f82e817637fde3a68dbd442c150 118 Gene3D G3DSA:1.20.1270.360 13 117 6.8E-24 T 11-10-2018 AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 Gene3D G3DSA:1.10.3860.10 1 434 4.4E-123 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 51 66 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 443 37.525 T 11-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 310 333 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 3.4E-27 T 11-10-2018 AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 3.4E-27 T 11-10-2018 AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 3.4E-27 T 11-10-2018 AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 PRINTS PR00173 Glutamate-aspartate symporter signature 307 333 3.4E-27 T 11-10-2018 AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 PRINTS PR00173 Glutamate-aspartate symporter signature 160 182 3.4E-27 T 11-10-2018 AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 PRINTS PR00173 Glutamate-aspartate symporter signature 342 361 3.4E-27 T 11-10-2018 AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 Pfam PF00375 Sodium:dicarboxylate symporter family 10 416 6.0E-111 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AYJ52_17355 bea4d878fa987fabf75f1678ec8e7337 452 SUPERFAMILY SSF118215 10 416 3.01E-120 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_10730 e4f8a0f5379358423f79c23f4ed7dc9f 704 Gene3D G3DSA:2.170.130.10 43 171 8.2E-33 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_10730 e4f8a0f5379358423f79c23f4ed7dc9f 704 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 704 1.3E-103 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_10730 e4f8a0f5379358423f79c23f4ed7dc9f 704 SUPERFAMILY SSF56935 30 704 3.05E-135 T 11-10-2018 AYJ52_10730 e4f8a0f5379358423f79c23f4ed7dc9f 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 161 7.6E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_10730 e4f8a0f5379358423f79c23f4ed7dc9f 704 Pfam PF00593 TonB dependent receptor 260 703 3.9E-63 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_10730 e4f8a0f5379358423f79c23f4ed7dc9f 704 Gene3D G3DSA:2.40.170.20 172 704 3.5E-126 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_19385 c4ac477c2f35d4b9e6e8db927d5603e4 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_19385 c4ac477c2f35d4b9e6e8db927d5603e4 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_19385 c4ac477c2f35d4b9e6e8db927d5603e4 191 Gene3D G3DSA:1.10.357.10 7 161 2.0E-26 T 11-10-2018 AYJ52_19385 c4ac477c2f35d4b9e6e8db927d5603e4 191 SUPERFAMILY SSF46689 12 80 3.44E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_19385 c4ac477c2f35d4b9e6e8db927d5603e4 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 9.6E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_08800 b22698075c5ef1e8382facec9f1c1ab8 90 Gene3D G3DSA:3.30.310.50 1 90 7.8E-23 T 11-10-2018 AYJ52_08800 b22698075c5ef1e8382facec9f1c1ab8 90 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 89 1.5E-18 T 11-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 AYJ52_06155 45d80f21f0e2a53a877e4c6803eacb32 232 Pfam PF08721 TnsA endonuclease C terminal 141 214 8.7E-10 T 11-10-2018 IPR014832 TnsA endonuclease C-terminal AYJ52_06155 45d80f21f0e2a53a877e4c6803eacb32 232 Pfam PF08722 TnsA endonuclease N terminal 55 137 4.1E-13 T 11-10-2018 IPR014833 TnsA endonuclease, N-terminal AYJ52_02955 1c14cdcf6107993c2890aa0ad2b263d0 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_02955 1c14cdcf6107993c2890aa0ad2b263d0 489 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 3 488 58.254 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AYJ52_02955 1c14cdcf6107993c2890aa0ad2b263d0 489 Gene3D G3DSA:3.40.309.10 249 439 3.4E-141 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_02955 1c14cdcf6107993c2890aa0ad2b263d0 489 Gene3D G3DSA:3.40.605.10 9 451 3.4E-141 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_02955 1c14cdcf6107993c2890aa0ad2b263d0 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_02955 1c14cdcf6107993c2890aa0ad2b263d0 489 Pfam PF00171 Aldehyde dehydrogenase family 11 461 5.6E-120 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_02955 1c14cdcf6107993c2890aa0ad2b263d0 489 SUPERFAMILY SSF53720 4 457 3.01E-121 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_02955 1c14cdcf6107993c2890aa0ad2b263d0 489 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 487 6.8E-258 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AYJ52_03460 75226437212a625825f44d004e0e1050 254 Gene3D G3DSA:3.40.50.2300 7 141 1.2E-40 T 11-10-2018 AYJ52_03460 75226437212a625825f44d004e0e1050 254 SMART SM00862 172 248 6.2E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_03460 75226437212a625825f44d004e0e1050 254 SMART SM00448 21 132 1.1E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_03460 75226437212a625825f44d004e0e1050 254 SUPERFAMILY SSF52172 22 143 7.12E-42 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_03460 75226437212a625825f44d004e0e1050 254 SUPERFAMILY SSF46894 154 250 6.52E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_03460 75226437212a625825f44d004e0e1050 254 Gene3D G3DSA:1.10.10.10 146 254 3.2E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_03460 75226437212a625825f44d004e0e1050 254 Pfam PF00072 Response regulator receiver domain 23 133 1.7E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_03460 75226437212a625825f44d004e0e1050 254 Pfam PF00486 Transcriptional regulatory protein, C terminal 173 248 1.5E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_17055 6081ab2eab03d61fcf6a2e2b654125e2 273 Gene3D G3DSA:2.60.40.10 37 157 1.5E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_17055 6081ab2eab03d61fcf6a2e2b654125e2 273 SUPERFAMILY SSF49354 28 157 2.17E-24 T 11-10-2018 IPR008962 PapD-like superfamily AYJ52_17055 6081ab2eab03d61fcf6a2e2b654125e2 273 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 43 155 9.4E-20 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AYJ52_16595 8ac31559fdac1aed60ea07abe8677017 192 Gene3D G3DSA:2.30.110.10 1 191 2.4E-51 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AYJ52_16595 8ac31559fdac1aed60ea07abe8677017 192 SUPERFAMILY SSF50475 6 188 9.32E-40 T 11-10-2018 AYJ52_16595 8ac31559fdac1aed60ea07abe8677017 192 SMART SM00903 16 158 3.7E-18 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AYJ52_16595 8ac31559fdac1aed60ea07abe8677017 192 Pfam PF01613 Flavin reductase like domain 21 160 1.8E-18 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 497 524 2.4E-5 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 596 624 1.5E-6 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 400 429 6.2E-6 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 1676 1689 4.6 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 2886 2902 1.4 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 2196 2209 2.7 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 306 334 2.4E-5 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 1493 1517 1.4 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 212 239 4.9E-4 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 1762 1775 0.33 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Pfam PF12245 Bacterial Ig-like domain (group 3) 2282 2304 1.3 T 11-10-2018 IPR022038 Bacterial Ig-like domain AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 3189 3274 1.1E-9 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.150.10.10 3126 3274 1.6E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:3.20.20.80 241 339 5.3E-11 T 11-10-2018 AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 630 737 9.3E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 2393 2469 2.1E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 1443 1520 6.1E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 1267 1349 6.2E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 2731 2813 1.1E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 1092 1173 3.1E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 1872 1952 1.0E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 1960 2041 1.4E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 340 434 3.0E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 435 529 1.7E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 530 629 4.0E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 Gene3D G3DSA:2.60.40.10 152 240 3.8E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 SUPERFAMILY SSF51120 3137 3246 2.22E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AYJ52_00520 89ccb4a855ba45c9b1464114a3fc5af9 3276 SUPERFAMILY SSF50939 188 592 2.75E-11 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AYJ52_17815 3e6ebe3cd406d1b63d338de495d77a4b 389 Pfam PF00425 chorismate binding enzyme 120 375 9.1E-71 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AYJ52_17815 3e6ebe3cd406d1b63d338de495d77a4b 389 Gene3D G3DSA:3.60.120.10 4 385 1.0E-111 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AYJ52_17815 3e6ebe3cd406d1b63d338de495d77a4b 389 SUPERFAMILY SSF56322 48 384 4.84E-89 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AYJ52_17815 3e6ebe3cd406d1b63d338de495d77a4b 389 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 97 383 2.0E-88 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AYJ52_13510 f61f552207dd07d91a366cf4b0d85362 167 Gene3D G3DSA:3.40.140.10 1 167 1.4E-58 T 11-10-2018 AYJ52_13510 f61f552207dd07d91a366cf4b0d85362 167 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AYJ52_13510 f61f552207dd07d91a366cf4b0d85362 167 Pfam PF14437 MafB19-like deaminase 6 152 4.6E-31 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AYJ52_13510 f61f552207dd07d91a366cf4b0d85362 167 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 152 41.406 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AYJ52_13510 f61f552207dd07d91a366cf4b0d85362 167 SUPERFAMILY SSF53927 4 156 7.7E-52 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AYJ52_07965 b61f054401b17e5c44f9d4c3019285c4 399 Pfam PF00589 Phage integrase family 206 351 2.9E-13 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AYJ52_07965 b61f054401b17e5c44f9d4c3019285c4 399 SUPERFAMILY SSF56349 98 384 3.53E-46 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AYJ52_07965 b61f054401b17e5c44f9d4c3019285c4 399 Gene3D G3DSA:1.10.150.130 95 203 4.8E-20 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AYJ52_07965 b61f054401b17e5c44f9d4c3019285c4 399 Pfam PF13356 Arm DNA-binding domain 3 88 9.1E-16 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AYJ52_07965 b61f054401b17e5c44f9d4c3019285c4 399 Gene3D G3DSA:1.10.443.10 204 390 4.3E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AYJ52_07965 b61f054401b17e5c44f9d4c3019285c4 399 Gene3D G3DSA:3.30.160.390 1 90 1.0E-18 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AYJ52_05815 bbea5118bb5bf919c14644e4d0db8482 279 Gene3D G3DSA:3.40.50.1980 173 275 8.1E-10 T 11-10-2018 AYJ52_05815 bbea5118bb5bf919c14644e4d0db8482 279 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 237 1.4E-23 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AYJ52_05815 bbea5118bb5bf919c14644e4d0db8482 279 Gene3D G3DSA:3.40.50.1980 22 172 4.4E-22 T 11-10-2018 AYJ52_05815 bbea5118bb5bf919c14644e4d0db8482 279 SUPERFAMILY SSF53807 23 260 2.06E-39 T 11-10-2018 AYJ52_15665 1d39e4fbf136fb3f17ed61ee4a270dae 166 SUPERFAMILY SSF111384 21 163 4.58E-24 T 11-10-2018 AYJ52_15665 1d39e4fbf136fb3f17ed61ee4a270dae 166 Gene3D G3DSA:3.30.910.20 12 166 2.1E-24 T 11-10-2018 IPR024930 Skp domain superfamily AYJ52_15665 1d39e4fbf136fb3f17ed61ee4a270dae 166 Pfam PF03938 Outer membrane protein (OmpH-like) 8 161 4.5E-22 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AYJ52_15665 1d39e4fbf136fb3f17ed61ee4a270dae 166 SMART SM00935 9 163 6.6E-32 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AYJ52_17140 77abf2e2601b5d18a4374f59f23e0698 271 SUPERFAMILY SSF56112 90 266 1.13E-23 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_17140 77abf2e2601b5d18a4374f59f23e0698 271 Gene3D G3DSA:1.10.510.10 109 270 1.3E-22 T 11-10-2018 AYJ52_17140 77abf2e2601b5d18a4374f59f23e0698 271 Pfam PF00069 Protein kinase domain 125 253 2.5E-12 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AYJ52_12320 7bf0998e5cde04c62909b9f95b62a0c3 281 SUPERFAMILY SSF55781 109 279 7.85E-39 T 11-10-2018 AYJ52_12320 7bf0998e5cde04c62909b9f95b62a0c3 281 Pfam PF01614 Bacterial transcriptional regulator 155 276 3.9E-13 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AYJ52_12320 7bf0998e5cde04c62909b9f95b62a0c3 281 Pfam PF09339 IclR helix-turn-helix domain 39 90 4.5E-16 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_12320 7bf0998e5cde04c62909b9f95b62a0c3 281 Gene3D G3DSA:1.10.10.10 26 105 6.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12320 7bf0998e5cde04c62909b9f95b62a0c3 281 SMART SM00346 37 127 2.4E-22 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_12320 7bf0998e5cde04c62909b9f95b62a0c3 281 SUPERFAMILY SSF46785 37 111 2.1E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12320 7bf0998e5cde04c62909b9f95b62a0c3 281 Gene3D G3DSA:3.30.450.40 106 281 1.7E-33 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_11330 92af3664392f001dff6a27bf7f8caa76 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_11330 92af3664392f001dff6a27bf7f8caa76 452 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 8 402 6.5E-131 T 11-10-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0016021|GO:0022857|GO:0055085 AYJ52_11330 92af3664392f001dff6a27bf7f8caa76 452 Gene3D G3DSA:1.20.1250.20 19 430 2.3E-76 T 11-10-2018 AYJ52_11330 92af3664392f001dff6a27bf7f8caa76 452 SUPERFAMILY SSF103473 9 429 1.15E-83 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_11330 92af3664392f001dff6a27bf7f8caa76 452 Pfam PF07690 Major Facilitator Superfamily 29 337 2.6E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_07805 060fa7dbf90769b44e68e9166c957feb 142 Pfam PF13279 Thioesterase-like superfamily 11 114 7.6E-8 T 11-10-2018 AYJ52_07805 060fa7dbf90769b44e68e9166c957feb 142 PIRSF PIRSF003230 2 135 8.2E-20 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AYJ52_07805 060fa7dbf90769b44e68e9166c957feb 142 Gene3D G3DSA:3.10.129.10 4 135 7.0E-24 T 11-10-2018 AYJ52_07805 060fa7dbf90769b44e68e9166c957feb 142 SUPERFAMILY SSF54637 7 137 9.4E-31 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_17870 7b48ff179a08c04780ed9a848f3ff754 322 SUPERFAMILY SSF53807 38 304 3.65E-60 T 11-10-2018 AYJ52_17870 7b48ff179a08c04780ed9a848f3ff754 322 Gene3D G3DSA:3.40.50.12250 43 302 1.3E-76 T 11-10-2018 AYJ52_17870 7b48ff179a08c04780ed9a848f3ff754 322 Pfam PF01497 Periplasmic binding protein 59 298 6.2E-32 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AYJ52_17870 7b48ff179a08c04780ed9a848f3ff754 322 Gene3D G3DSA:3.40.50.12260 192 295 1.3E-76 T 11-10-2018 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 1.1E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 1.1E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 1.1E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 1.1E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 1.1E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 35.815 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 SUPERFAMILY SSF52374 3 158 2.95E-45 T 11-10-2018 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 158 4.5E-59 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 63 2.7E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 Pfam PF01467 Cytidylyltransferase-like 7 135 3.6E-21 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AYJ52_09605 f0ed3c515f30a1bb6caabff6032aa8f2 163 Gene3D G3DSA:3.40.50.620 1 163 7.9E-60 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_16705 092d12f5697650772e60563d4d9fd28e 350 SUPERFAMILY SSF81464 14 115 3.43E-22 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16705 092d12f5697650772e60563d4d9fd28e 350 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 12 236 7.4E-101 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AYJ52_16705 092d12f5697650772e60563d4d9fd28e 350 Pfam PF06481 COX Aromatic Rich Motif 297 323 1.9E-8 T 11-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AYJ52_16705 092d12f5697650772e60563d4d9fd28e 350 PIRSF PIRSF000292 1 350 1.3E-127 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AYJ52_16705 092d12f5697650772e60563d4d9fd28e 350 Gene3D G3DSA:1.10.287.90 26 110 2.0E-30 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16705 092d12f5697650772e60563d4d9fd28e 350 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 144 222 1.0E-5 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AYJ52_16705 092d12f5697650772e60563d4d9fd28e 350 Gene3D G3DSA:2.60.40.420 111 277 8.1E-48 T 11-10-2018 IPR008972 Cupredoxin AYJ52_16705 092d12f5697650772e60563d4d9fd28e 350 SUPERFAMILY SSF49503 117 254 5.95E-44 T 11-10-2018 IPR008972 Cupredoxin AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 419 1.2E-35 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 Gene3D G3DSA:3.10.50.40 149 245 1.8E-97 T 11-10-2018 AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 SUPERFAMILY SSF109998 247 436 5.1E-44 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 SUPERFAMILY SSF102735 1 129 1.57E-37 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 Gene3D G3DSA:3.30.70.1050 1 114 4.2E-35 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 5.7E-42 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 TIGRFAM TIGR00115 tig: trigger factor 12 419 1.8E-142 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 SUPERFAMILY SSF54534 101 241 2.36E-36 T 11-10-2018 AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 PIRSF PIRSF003095 1 441 3.5E-127 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 Hamap MF_00303 Trigger factor [tig]. 1 425 21.632 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 Gene3D G3DSA:1.10.3120.10 115 424 1.8E-97 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 AYJ52_07610 f10256395a2796fa3f767358bb43d6fb 444 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 235 5.9E-16 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ52_15610 f8eb1c924180ce5406ba8b24576520fc 178 Gene3D G3DSA:3.40.630.30 1 159 2.0E-43 T 11-10-2018 AYJ52_15610 f8eb1c924180ce5406ba8b24576520fc 178 SUPERFAMILY SSF55729 1 172 1.4E-42 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_15610 f8eb1c924180ce5406ba8b24576520fc 178 Pfam PF13302 Acetyltransferase (GNAT) domain 6 147 1.7E-32 T 11-10-2018 IPR000182 GNAT domain AYJ52_11550 c321776ce389850f4da50858a81929f0 264 Pfam PF02585 GlcNAc-PI de-N-acetylase 48 172 1.5E-20 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AYJ52_11550 c321776ce389850f4da50858a81929f0 264 Gene3D G3DSA:3.40.50.10320 41 246 3.5E-35 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AYJ52_11550 c321776ce389850f4da50858a81929f0 264 SUPERFAMILY SSF102588 44 256 2.35E-40 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AYJ52_16770 ed72dc34f491f7e4af1b9e1feb99022c 516 Gene3D G3DSA:3.30.1490.270 385 445 1.5E-25 T 11-10-2018 AYJ52_16770 ed72dc34f491f7e4af1b9e1feb99022c 516 Gene3D G3DSA:3.40.50.11290 250 348 4.2E-39 T 11-10-2018 AYJ52_16770 ed72dc34f491f7e4af1b9e1feb99022c 516 SUPERFAMILY SSF56059 66 504 3.88E-55 T 11-10-2018 AYJ52_16770 ed72dc34f491f7e4af1b9e1feb99022c 516 Pfam PF14403 Circularly permuted ATP-grasp type 2 115 489 4.0E-148 T 11-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 AYJ52_16770 ed72dc34f491f7e4af1b9e1feb99022c 516 PIRSF PIRSF005522 35 516 3.3E-216 T 11-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 AYJ52_10675 2d3fbc723058392af4f5317ea69c4ded 287 SUPERFAMILY SSF53474 29 283 3.85E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10675 2d3fbc723058392af4f5317ea69c4ded 287 Gene3D G3DSA:3.40.50.1820 12 273 4.7E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10675 2d3fbc723058392af4f5317ea69c4ded 287 Pfam PF07859 alpha/beta hydrolase fold 71 151 3.6E-15 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 SUPERFAMILY SSF52540 293 518 1.73E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 Pfam PF00005 ABC transporter 329 459 1.3E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 SMART SM00382 336 503 1.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 SMART SM00382 26 222 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 SUPERFAMILY SSF52540 2 254 8.36E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 Pfam PF00005 ABC transporter 18 177 1.0E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 Gene3D G3DSA:3.40.50.300 1 258 4.7E-55 T 11-10-2018 AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 Gene3D G3DSA:3.40.50.300 274 539 2.0E-54 T 11-10-2018 AYJ52_04885 848f18fbbd92ca077a3cd2abecb4cc96 642 Pfam PF12848 ABC transporter 216 294 1.4E-29 T 11-10-2018 IPR032781 ABC-transporter extension domain AYJ52_05530 9108dcbc1e282d9c7a57463c42415126 167 Pfam PF11066 Protein of unknown function (DUF2867) 19 161 1.7E-34 T 11-10-2018 IPR021295 Protein of unknown function DUF2867 AYJ52_17450 09bc418dc961ee9a7dedfbf3fdaf959e 109 SUPERFAMILY SSF103481 4 105 2.22E-20 T 11-10-2018 AYJ52_17450 09bc418dc961ee9a7dedfbf3fdaf959e 109 Gene3D G3DSA:1.10.3730.20 1 108 1.3E-38 T 11-10-2018 AYJ52_17450 09bc418dc961ee9a7dedfbf3fdaf959e 109 Pfam PF00893 Small Multidrug Resistance protein 1 92 2.6E-29 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AYJ52_12770 35ebd0c24b59fc75a94abff414fbd057 431 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 55 143 1.2E-4 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_12770 35ebd0c24b59fc75a94abff414fbd057 431 SUPERFAMILY SSF56645 47 247 7.07E-37 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_12770 35ebd0c24b59fc75a94abff414fbd057 431 PIRSF PIRSF016578 29 108 6.5E-7 T 11-10-2018 AYJ52_12770 35ebd0c24b59fc75a94abff414fbd057 431 PIRSF PIRSF016578 165 408 2.5E-16 T 11-10-2018 AYJ52_12770 35ebd0c24b59fc75a94abff414fbd057 431 SUPERFAMILY SSF47203 258 401 5.71E-10 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_12770 35ebd0c24b59fc75a94abff414fbd057 431 Gene3D G3DSA:1.10.540.10 32 146 1.4E-15 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_12770 35ebd0c24b59fc75a94abff414fbd057 431 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 262 399 2.0E-12 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AYJ52_12770 35ebd0c24b59fc75a94abff414fbd057 431 Gene3D G3DSA:1.20.140.10 246 425 4.2E-52 T 11-10-2018 AYJ52_12770 35ebd0c24b59fc75a94abff414fbd057 431 Gene3D G3DSA:2.40.110.10 147 245 3.2E-26 T 11-10-2018 AYJ52_17075 68be4e748f8e4f9072f6526c793b53d4 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 8.8E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_17075 68be4e748f8e4f9072f6526c793b53d4 212 Gene3D G3DSA:1.10.357.10 20 207 2.6E-18 T 11-10-2018 AYJ52_17075 68be4e748f8e4f9072f6526c793b53d4 212 SUPERFAMILY SSF46689 17 89 1.02E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_17075 68be4e748f8e4f9072f6526c793b53d4 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 1.4E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_17075 68be4e748f8e4f9072f6526c793b53d4 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 1.4E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_04225 1fcfdf6fcf6ed459a95fc6ea05d252a4 167 Gene3D G3DSA:1.10.3330.10 1 166 9.3E-46 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AYJ52_04225 1fcfdf6fcf6ed459a95fc6ea05d252a4 167 Pfam PF09349 OHCU decarboxylase 7 161 1.2E-33 T 11-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AYJ52_04225 1fcfdf6fcf6ed459a95fc6ea05d252a4 167 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 6 164 3.8E-55 T 11-10-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 AYJ52_04225 1fcfdf6fcf6ed459a95fc6ea05d252a4 167 SUPERFAMILY SSF158694 3 163 3.14E-39 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AYJ52_14455 ca01d0b1c5a7141d0a1f934bf2063bed 391 Pfam PF05707 Zonular occludens toxin (Zot) 2 181 1.3E-18 T 11-10-2018 IPR008900 Zona occludens toxin AYJ52_14455 ca01d0b1c5a7141d0a1f934bf2063bed 391 Gene3D G3DSA:3.40.50.300 1 183 5.3E-36 T 11-10-2018 AYJ52_09935 348f0d52432fa9766b977c1502758901 466 Pfam PF10117 McrBC 5-methylcytosine restriction system component 90 403 2.3E-34 T 11-10-2018 IPR019292 5-methylcytosine restriction system component AYJ52_10110 147d4fa0994cb09888bd926c67013451 176 PIRSF PIRSF011484 1 176 4.2E-57 T 11-10-2018 IPR009822 YaeQ AYJ52_10110 147d4fa0994cb09888bd926c67013451 176 SMART SM01322 1 174 2.6E-97 T 11-10-2018 IPR009822 YaeQ AYJ52_10110 147d4fa0994cb09888bd926c67013451 176 Gene3D G3DSA:3.10.640.10 1 176 1.5E-66 T 11-10-2018 IPR038590 YaeQ superfamily AYJ52_10110 147d4fa0994cb09888bd926c67013451 176 SUPERFAMILY SSF52980 2 175 2.68E-61 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AYJ52_10110 147d4fa0994cb09888bd926c67013451 176 Pfam PF07152 YaeQ protein 1 170 1.4E-64 T 11-10-2018 IPR009822 YaeQ AYJ52_14620 c4c9ab8b8d548d5dfb9c0cece1ec59da 447 Pfam PF03929 PepSY-associated TM region 15 375 8.3E-54 T 11-10-2018 IPR005625 PepSY-associated TM protein AYJ52_18375 006f685dddc9fd631b554ba7f2873511 271 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 227 1.1E-39 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AYJ52_18375 006f685dddc9fd631b554ba7f2873511 271 Gene3D G3DSA:3.10.310.10 4 266 2.8E-81 T 11-10-2018 AYJ52_18375 006f685dddc9fd631b554ba7f2873511 271 Pfam PF02567 Phenazine biosynthesis-like protein 6 265 5.9E-56 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AYJ52_18375 006f685dddc9fd631b554ba7f2873511 271 PIRSF PIRSF016184 1 270 3.0E-50 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AYJ52_18375 006f685dddc9fd631b554ba7f2873511 271 Gene3D G3DSA:3.10.310.10 117 259 2.8E-81 T 11-10-2018 AYJ52_18375 006f685dddc9fd631b554ba7f2873511 271 SUPERFAMILY SSF54506 2 269 9.26E-69 T 11-10-2018 AYJ52_04640 91194231ba002da7e0722db84032b307 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_04640 91194231ba002da7e0722db84032b307 239 SUPERFAMILY SSF56104 2 232 1.44E-81 T 11-10-2018 AYJ52_04640 91194231ba002da7e0722db84032b307 239 Gene3D G3DSA:3.30.200.20 7 231 4.1E-94 T 11-10-2018 AYJ52_04640 91194231ba002da7e0722db84032b307 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 31.473 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_04640 91194231ba002da7e0722db84032b307 239 Gene3D G3DSA:3.30.470.20 85 220 4.1E-94 T 11-10-2018 AYJ52_04640 91194231ba002da7e0722db84032b307 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_04640 91194231ba002da7e0722db84032b307 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 234 4.0E-78 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AYJ52_04640 91194231ba002da7e0722db84032b307 239 Pfam PF01259 SAICAR synthetase 7 231 1.1E-65 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AYJ52_11955 8fd5ed7a8bb02d0be84e93e960e6c8a9 246 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 12 242 1.6E-82 T 11-10-2018 IPR017792 Urea carboxylase-associated protein 2 AYJ52_11955 8fd5ed7a8bb02d0be84e93e960e6c8a9 246 Pfam PF09347 Domain of unknown function (DUF1989) 16 186 7.4E-42 T 11-10-2018 IPR018959 Protein of unknown function DUF1989 AYJ52_02580 518d680cf4dce407cb9d30c4f67efad9 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.9E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02580 518d680cf4dce407cb9d30c4f67efad9 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02580 518d680cf4dce407cb9d30c4f67efad9 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.02 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02580 518d680cf4dce407cb9d30c4f67efad9 118 Gene3D G3DSA:1.10.8.50 1 71 4.6E-26 T 11-10-2018 AYJ52_02580 518d680cf4dce407cb9d30c4f67efad9 118 Gene3D G3DSA:4.10.910.10 72 118 3.8E-27 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02580 518d680cf4dce407cb9d30c4f67efad9 118 SUPERFAMILY SSF46946 2 114 6.15E-45 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AYJ52_02580 518d680cf4dce407cb9d30c4f67efad9 118 PIRSF PIRSF002134 1 118 1.6E-40 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02580 518d680cf4dce407cb9d30c4f67efad9 118 Pfam PF00416 Ribosomal protein S13/S18 3 62 4.5E-14 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02580 518d680cf4dce407cb9d30c4f67efad9 118 Pfam PF00416 Ribosomal protein S13/S18 65 108 9.7E-17 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_14505 47254f29e6f223207cdfdd4ccc6e110d 180 Pfam PF02498 BRO family, N-terminal domain 1 31 2.6E-10 T 11-10-2018 IPR003497 BRO N-terminal domain AYJ52_10415 1164d5f194d7632ef21b87aecd386f43 162 Pfam PF05728 Uncharacterised protein family (UPF0227) 2 88 3.5E-10 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AYJ52_10415 1164d5f194d7632ef21b87aecd386f43 162 Gene3D G3DSA:3.40.50.1820 1 160 8.6E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10415 1164d5f194d7632ef21b87aecd386f43 162 SUPERFAMILY SSF53474 2 96 1.18E-10 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_05655 b7f4dac6b6c8f70497978d3158284542 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 383 3.5E-10 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_05655 b7f4dac6b6c8f70497978d3158284542 597 Gene3D G3DSA:1.20.140.10 239 389 2.9E-17 T 11-10-2018 AYJ52_05655 b7f4dac6b6c8f70497978d3158284542 597 SUPERFAMILY SSF47203 236 384 2.74E-17 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_05655 b7f4dac6b6c8f70497978d3158284542 597 Gene3D G3DSA:1.10.540.10 30 123 1.8E-5 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_05655 b7f4dac6b6c8f70497978d3158284542 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 223 6.2E-10 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_05655 b7f4dac6b6c8f70497978d3158284542 597 Gene3D G3DSA:2.40.110.10 126 238 3.7E-21 T 11-10-2018 AYJ52_05655 b7f4dac6b6c8f70497978d3158284542 597 SUPERFAMILY SSF56645 16 246 9.56E-31 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_04400 8d9ce59ac725cb45f8204e32b3bb4d52 282 SUPERFAMILY SSF52821 6 132 1.7E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_04400 8d9ce59ac725cb45f8204e32b3bb4d52 282 Gene3D G3DSA:3.40.250.10 150 276 6.6E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_04400 8d9ce59ac725cb45f8204e32b3bb4d52 282 Gene3D G3DSA:3.40.250.10 6 141 1.6E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_04400 8d9ce59ac725cb45f8204e32b3bb4d52 282 SMART SM00450 12 127 1.5E-13 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_04400 8d9ce59ac725cb45f8204e32b3bb4d52 282 SMART SM00450 154 273 7.7E-20 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_04400 8d9ce59ac725cb45f8204e32b3bb4d52 282 SUPERFAMILY SSF52821 148 280 3.67E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AYJ52_04400 8d9ce59ac725cb45f8204e32b3bb4d52 282 Pfam PF00581 Rhodanese-like domain 14 122 1.6E-13 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_04400 8d9ce59ac725cb45f8204e32b3bb4d52 282 Pfam PF00581 Rhodanese-like domain 157 268 9.2E-17 T 11-10-2018 IPR001763 Rhodanese-like domain AYJ52_04400 8d9ce59ac725cb45f8204e32b3bb4d52 282 ProSitePatterns PS00683 Rhodanese C-terminal signature. 257 267 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AYJ52_12275 ec04d2728439db93b53756829bf51221 345 Gene3D G3DSA:3.40.190.10 141 316 1.2E-84 T 11-10-2018 AYJ52_12275 ec04d2728439db93b53756829bf51221 345 Gene3D G3DSA:3.40.190.10 40 313 1.2E-84 T 11-10-2018 AYJ52_12275 ec04d2728439db93b53756829bf51221 345 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 20 344 1.7E-144 T 11-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative AYJ52_12275 ec04d2728439db93b53756829bf51221 345 PIRSF PIRSF002825 5 344 5.1E-91 T 11-10-2018 IPR026045 Ferric binding protein AYJ52_12275 ec04d2728439db93b53756829bf51221 345 SUPERFAMILY SSF53850 33 341 5.65E-65 T 11-10-2018 AYJ52_12275 ec04d2728439db93b53756829bf51221 345 Pfam PF13343 Bacterial extracellular solute-binding protein 85 307 5.3E-29 T 11-10-2018 AYJ52_16200 22dbafb1124cbf061ba11f2f39ef45cf 190 SUPERFAMILY SSF53955 40 189 4.3E-51 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_16200 22dbafb1124cbf061ba11f2f39ef45cf 190 Gene3D G3DSA:1.10.530.40 45 190 1.5E-54 T 11-10-2018 AYJ52_16200 22dbafb1124cbf061ba11f2f39ef45cf 190 Pfam PF00959 Phage lysozyme 71 181 6.7E-23 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AYJ52_13875 5ab5ca8f4120de31226bd6f7ab4faaf6 372 Gene3D G3DSA:2.40.160.10 8 372 2.4E-50 T 11-10-2018 IPR023614 Porin domain superfamily AYJ52_13875 5ab5ca8f4120de31226bd6f7ab4faaf6 372 Pfam PF13609 Gram-negative porin 7 353 4.2E-30 T 11-10-2018 AYJ52_13875 5ab5ca8f4120de31226bd6f7ab4faaf6 372 SUPERFAMILY SSF56935 19 372 1.69E-44 T 11-10-2018 AYJ52_01250 21ad2380c0fa4507db5567be0af0210a 484 Pfam PF00575 S1 RNA binding domain 38 111 5.4E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 AYJ52_01250 21ad2380c0fa4507db5567be0af0210a 484 SMART SM00316 37 113 4.5E-13 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_01250 21ad2380c0fa4507db5567be0af0210a 484 Pfam PF10150 Ribonuclease E/G family 115 387 3.3E-102 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AYJ52_01250 21ad2380c0fa4507db5567be0af0210a 484 Gene3D G3DSA:2.40.50.140 31 118 1.5E-25 T 11-10-2018 AYJ52_01250 21ad2380c0fa4507db5567be0af0210a 484 SUPERFAMILY SSF50249 39 118 4.42E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_01250 21ad2380c0fa4507db5567be0af0210a 484 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 420 5.1E-154 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AYJ52_10430 e7280bc716134dfa3b298bcf45d29a6a 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 7.9E-65 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AYJ52_10430 e7280bc716134dfa3b298bcf45d29a6a 304 SUPERFAMILY SSF52402 8 212 5.18E-74 T 11-10-2018 AYJ52_10430 e7280bc716134dfa3b298bcf45d29a6a 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 57.154 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AYJ52_10430 e7280bc716134dfa3b298bcf45d29a6a 304 Gene3D G3DSA:3.40.50.620 9 214 3.0E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_10430 e7280bc716134dfa3b298bcf45d29a6a 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 6.7E-162 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AYJ52_10430 e7280bc716134dfa3b298bcf45d29a6a 304 PIRSF PIRSF002936 2 304 5.4E-158 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AYJ52_16045 6383bc293395b4fae35fe8e2fd924bfb 385 SUPERFAMILY SSF56796 2 383 1.96E-118 T 11-10-2018 AYJ52_16045 6383bc293395b4fae35fe8e2fd924bfb 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 375 4.2E-113 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AYJ52_16045 6383bc293395b4fae35fe8e2fd924bfb 385 Gene3D G3DSA:1.20.1090.10 186 384 8.7E-62 T 11-10-2018 AYJ52_16045 6383bc293395b4fae35fe8e2fd924bfb 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AYJ52_16045 6383bc293395b4fae35fe8e2fd924bfb 385 Gene3D G3DSA:3.40.50.1970 1 185 1.7E-51 T 11-10-2018 AYJ52_04055 a9dd2ef351afe58626d23d0615d9a829 566 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 562 2.9E-152 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AYJ52_04055 a9dd2ef351afe58626d23d0615d9a829 566 Pfam PF01368 DHH family 71 206 8.2E-10 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AYJ52_04055 a9dd2ef351afe58626d23d0615d9a829 566 Pfam PF02272 DHHA1 domain 314 442 3.0E-25 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AYJ52_04055 a9dd2ef351afe58626d23d0615d9a829 566 Gene3D G3DSA:3.10.310.30 319 451 5.1E-33 T 11-10-2018 AYJ52_04055 a9dd2ef351afe58626d23d0615d9a829 566 SUPERFAMILY SSF64182 52 449 9.68E-112 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AYJ52_04055 a9dd2ef351afe58626d23d0615d9a829 566 Gene3D G3DSA:3.90.1640.30 46 318 1.2E-87 T 11-10-2018 AYJ52_16120 396f8493253c8b082bc6575ca3a77413 216 Pfam PF01810 LysE type translocator 17 214 1.3E-38 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_16120 396f8493253c8b082bc6575ca3a77413 216 PIRSF PIRSF006324 2 216 1.9E-48 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.054 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 Gene3D G3DSA:3.30.260.10 136 410 1.5E-239 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 5.2E-95 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 SUPERFAMILY SSF54849 138 204 1.65E-21 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 Gene3D G3DSA:3.50.7.10 192 372 1.5E-239 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 SUPERFAMILY SSF52029 184 376 1.0E-83 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 SUPERFAMILY SSF48592 7 521 4.5E-78 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.0E-253 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AYJ52_00510 03848c3bcf6a860cdf6d7fb49a12c64e 544 Gene3D G3DSA:1.10.560.10 8 521 1.5E-239 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AYJ52_00550 c8783ef73284e7ea4d418a49de66ac1a 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_00550 c8783ef73284e7ea4d418a49de66ac1a 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_00550 c8783ef73284e7ea4d418a49de66ac1a 439 Gene3D G3DSA:1.20.1250.20 20 438 1.9E-69 T 11-10-2018 AYJ52_00550 c8783ef73284e7ea4d418a49de66ac1a 439 SUPERFAMILY SSF103473 22 433 5.89E-66 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_00550 c8783ef73284e7ea4d418a49de66ac1a 439 Pfam PF00083 Sugar (and other) transporter 30 219 2.2E-28 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AYJ52_00550 c8783ef73284e7ea4d418a49de66ac1a 439 Pfam PF00083 Sugar (and other) transporter 225 433 7.3E-14 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 SUPERFAMILY SSF51735 1 270 5.41E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 Gene3D G3DSA:3.40.50.720 1 275 1.5E-67 T 11-10-2018 AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.4E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_04355 bfbcbe0ac56a8fa35430f399c925ef5c 277 Pfam PF00106 short chain dehydrogenase 7 199 7.2E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03585 0f4bd01505377c204b24f3c19111e45f 199 Pfam PF01810 LysE type translocator 11 196 4.0E-23 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_13690 d3d10f7274c37a2eb33ff0d15f436d38 488 SUPERFAMILY SSF55073 223 407 2.2E-54 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_13690 d3d10f7274c37a2eb33ff0d15f436d38 488 Gene3D G3DSA:3.30.70.1230 218 412 2.3E-64 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_13690 d3d10f7274c37a2eb33ff0d15f436d38 488 SMART SM00044 191 388 5.8E-15 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AYJ52_13690 d3d10f7274c37a2eb33ff0d15f436d38 488 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 224 407 6.0E-34 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AYJ52_16135 afdd71de2a202df89c28ac66e8d03fd7 147 Pfam PF06271 RDD family 7 140 2.2E-28 T 11-10-2018 IPR010432 RDD AYJ52_08515 c4a6ace011fa5cd1dc1533a242ad7854 142 Pfam PF09335 SNARE associated Golgi protein 36 133 6.2E-12 T 11-10-2018 IPR032816 SNARE associated Golgi protein AYJ52_08515 c4a6ace011fa5cd1dc1533a242ad7854 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 4 133 6.0E-7 T 11-10-2018 IPR020143 Uncharacterised protein family, RP436 AYJ52_05540 87e5154c642cf5a6c2c99985b5fa97e8 221 Gene3D G3DSA:3.30.2350.10 7 220 1.5E-64 T 11-10-2018 AYJ52_05540 87e5154c642cf5a6c2c99985b5fa97e8 221 SUPERFAMILY SSF55120 12 220 5.12E-58 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_05540 87e5154c642cf5a6c2c99985b5fa97e8 221 Pfam PF00849 RNA pseudouridylate synthase 24 171 5.7E-28 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_15940 87c850505a698d53598478f1c63e0bf1 151 PIRSF PIRSF001399 1 148 1.0E-62 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_15940 87c850505a698d53598478f1c63e0bf1 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 144 8.1E-63 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_15940 87c850505a698d53598478f1c63e0bf1 151 Pfam PF01220 Dehydroquinase class II 5 141 2.6E-62 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_15940 87c850505a698d53598478f1c63e0bf1 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 73.373 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_15940 87c850505a698d53598478f1c63e0bf1 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 142 5.0E-61 T 11-10-2018 AYJ52_15940 87c850505a698d53598478f1c63e0bf1 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_15940 87c850505a698d53598478f1c63e0bf1 151 Gene3D G3DSA:3.40.50.9100 1 151 9.2E-69 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_15940 87c850505a698d53598478f1c63e0bf1 151 SUPERFAMILY SSF52304 4 146 1.31E-62 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AYJ52_13670 81ea5abe24471bbc643f2a4d46b72c8e 313 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 15 306 2.2E-73 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AYJ52_13670 81ea5abe24471bbc643f2a4d46b72c8e 313 SUPERFAMILY SSF54909 7 310 5.9E-99 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_13670 81ea5abe24471bbc643f2a4d46b72c8e 313 Pfam PF04261 Dyp-type peroxidase family 9 306 1.4E-77 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AYJ52_12415 be701e92fa2e874762edc4643537f628 313 Pfam PF03466 LysR substrate binding domain 95 298 1.4E-35 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12415 be701e92fa2e874762edc4643537f628 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 8.5E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12415 be701e92fa2e874762edc4643537f628 313 Gene3D G3DSA:1.10.10.10 9 95 6.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12415 be701e92fa2e874762edc4643537f628 313 SUPERFAMILY SSF53850 94 302 3.5E-41 T 11-10-2018 AYJ52_12415 be701e92fa2e874762edc4643537f628 313 SUPERFAMILY SSF46785 11 118 4.31E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12415 be701e92fa2e874762edc4643537f628 313 Gene3D G3DSA:3.40.190.290 97 300 6.8E-57 T 11-10-2018 AYJ52_11040 59e5d2f0502610f2492b4ce0b2ab4994 561 Gene3D G3DSA:3.40.720.10 31 474 8.8E-127 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AYJ52_11040 59e5d2f0502610f2492b4ce0b2ab4994 561 SUPERFAMILY SSF53649 32 552 2.86E-135 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AYJ52_11040 59e5d2f0502610f2492b4ce0b2ab4994 561 Gene3D G3DSA:3.30.1120.10 480 559 3.4E-17 T 11-10-2018 AYJ52_11040 59e5d2f0502610f2492b4ce0b2ab4994 561 ProSitePatterns PS00523 Sulfatases signature 1. 78 90 - T 11-10-2018 IPR024607 Sulfatase, conserved site AYJ52_11040 59e5d2f0502610f2492b4ce0b2ab4994 561 Pfam PF00884 Sulfatase 34 445 2.2E-76 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AYJ52_12905 cbeb4f39a87b250d67fc49a01e95a021 279 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 14 260 4.5E-66 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AYJ52_12905 cbeb4f39a87b250d67fc49a01e95a021 279 SUPERFAMILY SSF75217 12 178 2.81E-36 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AYJ52_12905 cbeb4f39a87b250d67fc49a01e95a021 279 Gene3D G3DSA:1.10.8.590 189 274 1.8E-21 T 11-10-2018 AYJ52_12905 cbeb4f39a87b250d67fc49a01e95a021 279 Pfam PF00588 SpoU rRNA Methylase family 16 166 1.9E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AYJ52_12905 cbeb4f39a87b250d67fc49a01e95a021 279 PIRSF PIRSF004808 11 265 1.8E-66 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AYJ52_12905 cbeb4f39a87b250d67fc49a01e95a021 279 Gene3D G3DSA:3.40.1280.10 12 178 8.7E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ52_11705 6c1418fbe8c9af46ce93c592dc27c47c 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 105 4.3E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_11705 6c1418fbe8c9af46ce93c592dc27c47c 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 157 185 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AYJ52_11705 6c1418fbe8c9af46ce93c592dc27c47c 203 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 149 183 9.8E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_11705 6c1418fbe8c9af46ce93c592dc27c47c 203 Gene3D G3DSA:2.160.10.10 38 202 3.1E-45 T 11-10-2018 AYJ52_11705 6c1418fbe8c9af46ce93c592dc27c47c 203 SUPERFAMILY SSF51161 45 201 2.36E-40 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_02095 b4ce3e1f591853d651bc8e098b612ccb 164 Gene3D G3DSA:3.10.129.10 10 158 6.1E-36 T 11-10-2018 AYJ52_02095 b4ce3e1f591853d651bc8e098b612ccb 164 Pfam PF14539 Domain of unknown function (DUF4442) 24 156 2.1E-33 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AYJ52_02095 b4ce3e1f591853d651bc8e098b612ccb 164 SUPERFAMILY SSF54637 16 160 6.84E-22 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_19425 032bccfd29774de7c771bae37bc1036d 1094 Gene3D G3DSA:3.40.50.300 528 776 7.0E-22 T 11-10-2018 AYJ52_19425 032bccfd29774de7c771bae37bc1036d 1094 Gene3D G3DSA:3.90.1570.50 105 184 5.4E-6 T 11-10-2018 AYJ52_19425 032bccfd29774de7c771bae37bc1036d 1094 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 11 184 1.1E-13 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AYJ52_19425 032bccfd29774de7c771bae37bc1036d 1094 SMART SM00487 288 528 2.3E-8 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ52_19425 032bccfd29774de7c771bae37bc1036d 1094 Pfam PF04851 Type III restriction enzyme, res subunit 292 498 2.6E-15 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AYJ52_19425 032bccfd29774de7c771bae37bc1036d 1094 Gene3D G3DSA:3.40.50.300 292 509 3.4E-21 T 11-10-2018 AYJ52_19425 032bccfd29774de7c771bae37bc1036d 1094 SUPERFAMILY SSF52540 258 544 1.22E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18530 9686ac85ed36337220664806ffb2df8c 314 SUPERFAMILY SSF103481 36 140 3.79E-8 T 11-10-2018 AYJ52_18530 9686ac85ed36337220664806ffb2df8c 314 SUPERFAMILY SSF103481 196 283 9.02E-5 T 11-10-2018 AYJ52_18530 9686ac85ed36337220664806ffb2df8c 314 Pfam PF00892 EamA-like transporter family 3 139 1.9E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_18530 9686ac85ed36337220664806ffb2df8c 314 TIGRFAM TIGR00688 rarD: protein RarD 2 255 1.8E-56 T 11-10-2018 IPR004626 RarD protein GO:0005887 AYJ52_11480 8584039fd5ee60ebb458d803ad86a4c7 181 SUPERFAMILY SSF53955 1 179 5.91E-39 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_11480 8584039fd5ee60ebb458d803ad86a4c7 181 Gene3D G3DSA:1.20.141.10 2 181 2.2E-36 T 11-10-2018 AYJ52_11480 8584039fd5ee60ebb458d803ad86a4c7 181 Pfam PF05838 Glycosyl hydrolase 108 8 90 1.9E-21 T 11-10-2018 IPR008565 Protein of unknown function DUF847 AYJ52_11480 8584039fd5ee60ebb458d803ad86a4c7 181 Pfam PF09374 Predicted Peptidoglycan domain 97 178 7.5E-12 T 11-10-2018 IPR018537 Peptidoglycan binding domain AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 Gene3D G3DSA:1.10.275.10 4 137 2.7E-58 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 6.7E-35 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 6.7E-35 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 6.7E-35 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 6.7E-35 T 11-10-2018 IPR000362 Fumarate lyase family AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 460 8.6E-229 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 Pfam PF10415 Fumarase C C-terminus 407 459 9.4E-26 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 90.746 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 Pfam PF00206 Lyase 11 341 3.8E-114 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 SUPERFAMILY SSF48557 3 461 1.21E-158 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 Gene3D G3DSA:1.10.40.30 406 464 9.7E-28 T 11-10-2018 AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 Gene3D G3DSA:1.20.200.10 138 405 5.6E-118 T 11-10-2018 AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 8.6E-5 T 11-10-2018 AYJ52_15790 2e1f7d72b26688f76b27c1b652846d2b 464 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 8.6E-5 T 11-10-2018 AYJ52_19655 a5469346548da2726ba8183afb4e7813 234 SUPERFAMILY SSF53098 72 191 1.21E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_19655 a5469346548da2726ba8183afb4e7813 234 Pfam PF13610 DDE domain 73 212 3.3E-50 T 11-10-2018 IPR032874 DDE domain AYJ52_18860 a5469346548da2726ba8183afb4e7813 234 SUPERFAMILY SSF53098 72 191 1.21E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_18860 a5469346548da2726ba8183afb4e7813 234 Pfam PF13610 DDE domain 73 212 3.3E-50 T 11-10-2018 IPR032874 DDE domain AYJ52_19600 a5469346548da2726ba8183afb4e7813 234 SUPERFAMILY SSF53098 72 191 1.21E-7 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_19600 a5469346548da2726ba8183afb4e7813 234 Pfam PF13610 DDE domain 73 212 3.3E-50 T 11-10-2018 IPR032874 DDE domain AYJ52_10140 537c41df52dd354a459f480ac34e5821 262 Gene3D G3DSA:1.10.12.10 205 262 2.8E-19 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AYJ52_10140 537c41df52dd354a459f480ac34e5821 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 261 4.9E-42 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_10140 537c41df52dd354a459f480ac34e5821 262 Gene3D G3DSA:3.90.226.10 2 204 3.3E-57 T 11-10-2018 AYJ52_10140 537c41df52dd354a459f480ac34e5821 262 SUPERFAMILY SSF52096 8 261 4.58E-64 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_16145 fc22c0f401e4666b29e11cd622024680 147 Gene3D G3DSA:3.40.50.620 1 147 3.9E-35 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_16145 fc22c0f401e4666b29e11cd622024680 147 PIRSF PIRSF006276 1 147 2.2E-21 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_16145 fc22c0f401e4666b29e11cd622024680 147 SUPERFAMILY SSF52402 1 146 2.51E-35 T 11-10-2018 AYJ52_16145 fc22c0f401e4666b29e11cd622024680 147 PRINTS PR01438 Universal stress protein signature 106 118 1.0E-17 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_16145 fc22c0f401e4666b29e11cd622024680 147 PRINTS PR01438 Universal stress protein signature 124 146 1.0E-17 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_16145 fc22c0f401e4666b29e11cd622024680 147 PRINTS PR01438 Universal stress protein signature 3 21 1.0E-17 T 11-10-2018 IPR006015 Universal stress protein A AYJ52_16145 fc22c0f401e4666b29e11cd622024680 147 Pfam PF00582 Universal stress protein family 3 146 5.4E-28 T 11-10-2018 IPR006016 UspA AYJ52_13465 d2d9847bdbe0a34edcba4c9b5784eed4 257 SUPERFAMILY SSF51556 2 255 5.99E-81 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_13465 d2d9847bdbe0a34edcba4c9b5784eed4 257 Pfam PF01026 TatD related DNase 3 254 4.8E-73 T 11-10-2018 IPR001130 TatD family GO:0016788 AYJ52_13465 d2d9847bdbe0a34edcba4c9b5784eed4 257 PIRSF PIRSF005902 1 256 1.1E-73 T 11-10-2018 IPR001130 TatD family GO:0016788 AYJ52_13465 d2d9847bdbe0a34edcba4c9b5784eed4 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 7.3E-84 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AYJ52_13465 d2d9847bdbe0a34edcba4c9b5784eed4 257 Gene3D G3DSA:3.20.20.140 1 257 1.6E-86 T 11-10-2018 AYJ52_13465 d2d9847bdbe0a34edcba4c9b5784eed4 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AYJ52_16530 0435613a4545f0fb406181d304f892ff 439 Gene3D G3DSA:1.20.1250.20 7 424 4.5E-31 T 11-10-2018 AYJ52_16530 0435613a4545f0fb406181d304f892ff 439 SUPERFAMILY SSF103473 8 427 5.62E-34 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_16530 0435613a4545f0fb406181d304f892ff 439 Pfam PF07690 Major Facilitator Superfamily 17 383 3.5E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_18200 980345e43a23ec8d57e83799cce9a7d7 183 Gene3D G3DSA:2.160.10.10 4 183 1.8E-55 T 11-10-2018 AYJ52_18200 980345e43a23ec8d57e83799cce9a7d7 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 1.1E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_18200 980345e43a23ec8d57e83799cce9a7d7 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 47 6.9E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_18200 980345e43a23ec8d57e83799cce9a7d7 183 SUPERFAMILY SSF51161 5 176 5.27E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_02860 de3a9c26aed08445dccb207cb9978d4c 84 Pfam PF04024 PspC domain 6 63 3.1E-21 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AYJ52_18380 583e812d901c50ab061014633a617c52 464 Gene3D G3DSA:1.10.3860.10 19 461 7.9E-109 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_18380 583e812d901c50ab061014633a617c52 464 SUPERFAMILY SSF118215 29 442 2.35E-98 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_18380 583e812d901c50ab061014633a617c52 464 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 8.3E-104 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AYJ52_18380 583e812d901c50ab061014633a617c52 464 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.2E-26 T 11-10-2018 AYJ52_18380 583e812d901c50ab061014633a617c52 464 PRINTS PR00173 Glutamate-aspartate symporter signature 260 279 1.2E-26 T 11-10-2018 AYJ52_18380 583e812d901c50ab061014633a617c52 464 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.2E-26 T 11-10-2018 AYJ52_18380 583e812d901c50ab061014633a617c52 464 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.2E-26 T 11-10-2018 AYJ52_18380 583e812d901c50ab061014633a617c52 464 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.2E-26 T 11-10-2018 AYJ52_18380 583e812d901c50ab061014633a617c52 464 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.2E-26 T 11-10-2018 AYJ52_18380 583e812d901c50ab061014633a617c52 464 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.2E-26 T 11-10-2018 AYJ52_13455 4af92764981e8d4c8c24115653f632ab 326 Pfam PF13177 DNA polymerase III, delta subunit 27 173 1.1E-36 T 11-10-2018 AYJ52_13455 4af92764981e8d4c8c24115653f632ab 326 SUPERFAMILY SSF52540 11 213 1.27E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13455 4af92764981e8d4c8c24115653f632ab 326 Gene3D G3DSA:3.40.50.300 7 171 3.3E-45 T 11-10-2018 AYJ52_11870 9d62ce893c520ee8fc8b9b73f5d14b90 156 Pfam PF05229 Spore Coat Protein U domain 27 152 1.8E-23 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_11870 9d62ce893c520ee8fc8b9b73f5d14b90 156 SMART SM00972 96 153 9.8E-6 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_19200 285ed34de1e34401121b61c709f5992d 270 SUPERFAMILY SSF56281 51 261 7.58E-31 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_19200 285ed34de1e34401121b61c709f5992d 270 Pfam PF00753 Metallo-beta-lactamase superfamily 72 232 5.4E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_19200 285ed34de1e34401121b61c709f5992d 270 SMART SM00849 74 250 2.4E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_19200 285ed34de1e34401121b61c709f5992d 270 Gene3D G3DSA:3.60.15.10 29 270 2.6E-97 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_18180 e5974e61dd6dd7f8d41f261fd3545acb 256 Gene3D G3DSA:3.40.1210.10 1 255 1.1E-82 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AYJ52_18180 e5974e61dd6dd7f8d41f261fd3545acb 256 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 242 1.8E-66 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AYJ52_18180 e5974e61dd6dd7f8d41f261fd3545acb 256 SUPERFAMILY SSF64167 2 251 2.62E-76 T 11-10-2018 AYJ52_18180 e5974e61dd6dd7f8d41f261fd3545acb 256 Pfam PF01975 Survival protein SurE 3 186 3.4E-56 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AYJ52_18180 e5974e61dd6dd7f8d41f261fd3545acb 256 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 256 35.492 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AYJ52_02645 7652197875988bc9f6c8de2ec9df3038 85 Gene3D G3DSA:2.40.50.140 2 84 3.3E-35 T 11-10-2018 AYJ52_02645 7652197875988bc9f6c8de2ec9df3038 85 SUPERFAMILY SSF50249 7 83 3.38E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_02645 7652197875988bc9f6c8de2ec9df3038 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02645 7652197875988bc9f6c8de2ec9df3038 85 Pfam PF00366 Ribosomal protein S17 11 78 1.0E-31 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02645 7652197875988bc9f6c8de2ec9df3038 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 77 1.0E-34 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02645 7652197875988bc9f6c8de2ec9df3038 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 25.09 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02645 7652197875988bc9f6c8de2ec9df3038 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 77 1.9E-36 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02645 7652197875988bc9f6c8de2ec9df3038 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 3.1E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02645 7652197875988bc9f6c8de2ec9df3038 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 3.1E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02645 7652197875988bc9f6c8de2ec9df3038 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 3.1E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_17605 f9d155fb1b30bf04827215a20bad1a67 404 Pfam PF07690 Major Facilitator Superfamily 22 320 1.1E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_17605 f9d155fb1b30bf04827215a20bad1a67 404 SUPERFAMILY SSF103473 12 396 1.28E-58 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_17605 f9d155fb1b30bf04827215a20bad1a67 404 Gene3D G3DSA:1.20.1250.20 6 400 4.6E-49 T 11-10-2018 AYJ52_18055 f78a53edfe011972a460ff0a2783f97b 197 SMART SM00857 3 153 6.9E-33 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AYJ52_18055 f78a53edfe011972a460ff0a2783f97b 197 Pfam PF00239 Resolvase, N terminal domain 5 149 2.3E-25 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AYJ52_18055 f78a53edfe011972a460ff0a2783f97b 197 ProSitePatterns PS00398 Site-specific recombinases signature 2. 61 73 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AYJ52_18055 f78a53edfe011972a460ff0a2783f97b 197 Pfam PF02796 Helix-turn-helix domain of resolvase 157 196 5.2E-7 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AYJ52_18055 f78a53edfe011972a460ff0a2783f97b 197 Gene3D G3DSA:1.10.10.60 156 197 2.0E-7 T 11-10-2018 AYJ52_18055 f78a53edfe011972a460ff0a2783f97b 197 SUPERFAMILY SSF53041 3 149 3.01E-26 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AYJ52_18055 f78a53edfe011972a460ff0a2783f97b 197 Gene3D G3DSA:3.40.50.1390 4 153 3.9E-26 T 11-10-2018 AYJ52_18055 f78a53edfe011972a460ff0a2783f97b 197 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AYJ52_06470 3151529d7de5bcb83255bf1beeeea45a 270 Gene3D G3DSA:3.60.21.10 2 266 1.5E-62 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AYJ52_06470 3151529d7de5bcb83255bf1beeeea45a 270 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 256 38.313 T 11-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AYJ52_06470 3151529d7de5bcb83255bf1beeeea45a 270 SUPERFAMILY SSF56300 15 265 3.11E-54 T 11-10-2018 AYJ52_06470 3151529d7de5bcb83255bf1beeeea45a 270 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 207 256 6.0E-10 T 11-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AYJ52_06470 3151529d7de5bcb83255bf1beeeea45a 270 Pfam PF00149 Calcineurin-like phosphoesterase 14 202 3.3E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AYJ52_10750 d22892762263d0c5b30b8f8f7cf0a656 220 Gene3D G3DSA:3.30.420.10 14 211 9.4E-45 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_10750 d22892762263d0c5b30b8f8f7cf0a656 220 SMART SM00479 22 210 1.8E-21 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_10750 d22892762263d0c5b30b8f8f7cf0a656 220 SUPERFAMILY SSF53098 13 209 7.15E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_10750 d22892762263d0c5b30b8f8f7cf0a656 220 TIGRFAM TIGR01298 RNaseT: ribonuclease T 15 208 4.6E-83 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AYJ52_10750 d22892762263d0c5b30b8f8f7cf0a656 220 Hamap MF_00157 Ribonuclease T [rnt]. 1 220 90.181 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AYJ52_10750 d22892762263d0c5b30b8f8f7cf0a656 220 Pfam PF00929 Exonuclease 24 201 1.5E-31 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_18290 49d18e8a08fb871e4e4fb86ae07fc20b 510 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 82 428 8.0E-61 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AYJ52_18290 49d18e8a08fb871e4e4fb86ae07fc20b 510 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 312 333 - T 11-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 AYJ52_18290 49d18e8a08fb871e4e4fb86ae07fc20b 510 SUPERFAMILY SSF53383 19 496 3.23E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_18290 49d18e8a08fb871e4e4fb86ae07fc20b 510 Gene3D G3DSA:3.40.640.10 113 372 1.7E-128 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_18290 49d18e8a08fb871e4e4fb86ae07fc20b 510 Gene3D G3DSA:3.90.1150.170 45 487 1.7E-128 T 11-10-2018 AYJ52_18885 c28f1cac84aed9dc75e93b3e845005b7 180 Gene3D G3DSA:3.40.50.300 1 179 8.4E-47 T 11-10-2018 AYJ52_18885 c28f1cac84aed9dc75e93b3e845005b7 180 Pfam PF13238 AAA domain 3 135 2.7E-9 T 11-10-2018 AYJ52_18885 c28f1cac84aed9dc75e93b3e845005b7 180 SUPERFAMILY SSF52540 1 177 3.86E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_14755 cb37df32a491237a4022be75d7b00878 225 SUPERFAMILY SSF89562 24 185 2.62E-47 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AYJ52_14755 cb37df32a491237a4022be75d7b00878 225 Gene3D G3DSA:3.50.30.100 5 198 2.3E-56 T 11-10-2018 AYJ52_14755 cb37df32a491237a4022be75d7b00878 225 Pfam PF03737 Aldolase/RraA 28 173 7.5E-45 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AYJ52_02785 10c31317a8b3584f2ea16fbe2ec0dd71 95 Gene3D G3DSA:3.30.750.24 7 95 1.1E-9 T 11-10-2018 IPR036513 STAS domain superfamily AYJ52_02785 10c31317a8b3584f2ea16fbe2ec0dd71 95 Pfam PF13466 STAS domain 9 84 2.5E-8 T 11-10-2018 IPR002645 STAS domain AYJ52_02785 10c31317a8b3584f2ea16fbe2ec0dd71 95 SUPERFAMILY SSF52091 9 93 1.47E-9 T 11-10-2018 IPR036513 STAS domain superfamily AYJ52_15380 2099b2936e410a80a40f6f24714c9bbd 445 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 33 417 1.5E-100 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AYJ52_15380 2099b2936e410a80a40f6f24714c9bbd 445 Pfam PF02386 Cation transport protein 43 428 6.5E-57 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AYJ52_10005 6bdc300a8991cfcf248adb788c22ef28 496 SUPERFAMILY SSF48452 83 162 3.79E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_10005 6bdc300a8991cfcf248adb788c22ef28 496 Gene3D G3DSA:1.25.40.10 61 216 4.1E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_10005 6bdc300a8991cfcf248adb788c22ef28 496 Pfam PF04575 Protein of unknown function (DUF560) 198 496 4.1E-54 T 11-10-2018 IPR007655 Protein of unknown function DUF560 AYJ52_09205 6db59c2e37f8c2bf722272a48b45dca6 97 PIRSF PIRSF002599 1 91 1.1E-12 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AYJ52_09205 6db59c2e37f8c2bf722272a48b45dca6 97 SMART SM00357 7 68 1.1E-4 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AYJ52_09205 6db59c2e37f8c2bf722272a48b45dca6 97 Gene3D G3DSA:2.40.50.140 1 86 6.7E-16 T 11-10-2018 AYJ52_09205 6db59c2e37f8c2bf722272a48b45dca6 97 Pfam PF00313 'Cold-shock' DNA-binding domain 7 67 8.4E-12 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AYJ52_09205 6db59c2e37f8c2bf722272a48b45dca6 97 SUPERFAMILY SSF50249 5 71 1.59E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_18245 03d146aabf49ee1174e96d7395415e05 465 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 261 462 4.3E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_18245 03d146aabf49ee1174e96d7395415e05 465 Pfam PF11812 Domain of unknown function (DUF3333) 32 196 3.6E-43 T 11-10-2018 IPR024573 Domain of unknown function DUF3333 AYJ52_18245 03d146aabf49ee1174e96d7395415e05 465 Gene3D G3DSA:1.10.3720.10 237 463 6.7E-35 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_18245 03d146aabf49ee1174e96d7395415e05 465 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 222 462 5.3E-65 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AYJ52_18245 03d146aabf49ee1174e96d7395415e05 465 SUPERFAMILY SSF161098 240 451 3.27E-36 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_06870 b4a68a56d0106bc944ad55918b7a203e 264 Pfam PF00121 Triosephosphate isomerase 9 257 1.4E-79 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_06870 b4a68a56d0106bc944ad55918b7a203e 264 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 10 250 2.3E-52 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_06870 b4a68a56d0106bc944ad55918b7a203e 264 Gene3D G3DSA:3.20.20.70 5 264 8.3E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_06870 b4a68a56d0106bc944ad55918b7a203e 264 SUPERFAMILY SSF51351 7 260 2.36E-79 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_06870 b4a68a56d0106bc944ad55918b7a203e 264 ProSitePatterns PS00171 Triosephosphate isomerase active site. 177 187 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_06870 b4a68a56d0106bc944ad55918b7a203e 264 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 6 259 55.943 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AYJ52_04210 26949b6279a021856146ead8e8b1526e 181 SUPERFAMILY SSF48403 6 139 3.18E-10 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AYJ52_04210 26949b6279a021856146ead8e8b1526e 181 Gene3D G3DSA:1.25.40.20 2 180 8.9E-16 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AYJ52_11035 8331e8402df1941d6ea6ac5dc329ee1f 322 Gene3D G3DSA:3.90.1580.10 42 322 5.2E-82 T 11-10-2018 AYJ52_11035 8331e8402df1941d6ea6ac5dc329ee1f 322 SUPERFAMILY SSF56436 53 320 6.59E-73 T 11-10-2018 IPR016187 C-type lectin fold AYJ52_11035 8331e8402df1941d6ea6ac5dc329ee1f 322 Pfam PF03781 Sulfatase-modifying factor enzyme 1 52 320 3.3E-67 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AYJ52_16720 f659c677cf974c12fb95763dc98fb530 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 6.1E-38 T 11-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AYJ52_16720 f659c677cf974c12fb95763dc98fb530 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 5.2E-17 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AYJ52_07980 95b6ef81ca04c97afaa5c2333406eaf7 259 Gene3D G3DSA:3.30.420.10 108 257 1.2E-17 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_07980 95b6ef81ca04c97afaa5c2333406eaf7 259 Pfam PF00665 Integrase core domain 110 223 6.3E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_07980 95b6ef81ca04c97afaa5c2333406eaf7 259 SUPERFAMILY SSF53098 104 259 1.39E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_03305 6ffff57f61b1957f558b1da52c1ae475 110 Hamap MF_00910 Cell division protein FtsL [ftsL]. 16 100 13.504 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AYJ52_03305 6ffff57f61b1957f558b1da52c1ae475 110 Pfam PF04999 Cell division protein FtsL 20 101 2.2E-26 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AYJ52_03305 6ffff57f61b1957f558b1da52c1ae475 110 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 100 3.4E-12 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AYJ52_04810 d32ea2b1b41615812713485947fa5a2e 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.5E-25 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AYJ52_04810 d32ea2b1b41615812713485947fa5a2e 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 86 112 1.5E-25 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AYJ52_04810 d32ea2b1b41615812713485947fa5a2e 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 391 411 1.5E-25 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AYJ52_04810 d32ea2b1b41615812713485947fa5a2e 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 1.5E-25 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AYJ52_04810 d32ea2b1b41615812713485947fa5a2e 492 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 313 332 1.5E-25 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AYJ52_04810 d32ea2b1b41615812713485947fa5a2e 492 SUPERFAMILY SSF161070 5 485 1.57E-136 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AYJ52_04810 d32ea2b1b41615812713485947fa5a2e 492 Pfam PF00209 Sodium:neurotransmitter symporter family 126 482 1.7E-67 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AYJ52_04810 d32ea2b1b41615812713485947fa5a2e 492 Pfam PF00209 Sodium:neurotransmitter symporter family 5 119 2.0E-38 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AYJ52_04810 d32ea2b1b41615812713485947fa5a2e 492 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 29 43 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AYJ52_14075 db568c064d980f11763ad6a7d9cccc3d 75 Pfam PF01638 HxlR-like helix-turn-helix 1 54 2.5E-15 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AYJ52_14075 db568c064d980f11763ad6a7d9cccc3d 75 SUPERFAMILY SSF46785 1 64 3.27E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14075 db568c064d980f11763ad6a7d9cccc3d 75 Gene3D G3DSA:1.10.10.10 1 67 1.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12260 a7608b4fd1ed1c00d92f86ba125a8482 404 SUPERFAMILY SSF54373 177 277 1.1E-44 T 11-10-2018 AYJ52_12260 a7608b4fd1ed1c00d92f86ba125a8482 404 SUPERFAMILY SSF51905 5 392 7.58E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_12260 a7608b4fd1ed1c00d92f86ba125a8482 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 1.9E-26 T 11-10-2018 AYJ52_12260 a7608b4fd1ed1c00d92f86ba125a8482 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 1.9E-26 T 11-10-2018 AYJ52_12260 a7608b4fd1ed1c00d92f86ba125a8482 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.9E-26 T 11-10-2018 AYJ52_12260 a7608b4fd1ed1c00d92f86ba125a8482 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 1.9E-26 T 11-10-2018 AYJ52_12260 a7608b4fd1ed1c00d92f86ba125a8482 404 Pfam PF01494 FAD binding domain 5 345 3.5E-88 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AYJ52_12260 a7608b4fd1ed1c00d92f86ba125a8482 404 Gene3D G3DSA:3.50.50.60 5 353 1.2E-162 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_12260 a7608b4fd1ed1c00d92f86ba125a8482 404 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 4 392 5.4E-208 T 11-10-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 AYJ52_12260 a7608b4fd1ed1c00d92f86ba125a8482 404 Gene3D G3DSA:3.30.9.10 76 389 1.2E-162 T 11-10-2018 AYJ52_07885 50d4daa587a8a99ce82cfc89ea76cd36 243 PIRSF PIRSF009160 1 243 1.1E-78 T 11-10-2018 IPR010539 Protein of unknown function UCP009160 AYJ52_07885 50d4daa587a8a99ce82cfc89ea76cd36 243 Pfam PF12811 Bax inhibitor 1 like 5 240 2.0E-62 T 11-10-2018 IPR010539 Protein of unknown function UCP009160 AYJ52_16420 a8325e027bd32dbee5e7838e74be0257 285 SUPERFAMILY SSF103481 185 281 1.07E-7 T 11-10-2018 AYJ52_16420 a8325e027bd32dbee5e7838e74be0257 285 Pfam PF00892 EamA-like transporter family 2 133 2.4E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_16420 a8325e027bd32dbee5e7838e74be0257 285 Pfam PF00892 EamA-like transporter family 148 280 9.1E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_16420 a8325e027bd32dbee5e7838e74be0257 285 SUPERFAMILY SSF103481 37 135 1.27E-10 T 11-10-2018 AYJ52_04130 d51084c8e71691a709a1edace72014c3 284 Pfam PF08478 POTRA domain, FtsQ-type 61 127 5.1E-13 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type AYJ52_04130 d51084c8e71691a709a1edace72014c3 284 Gene3D G3DSA:3.40.50.11690 130 258 1.1E-30 T 11-10-2018 AYJ52_04130 d51084c8e71691a709a1edace72014c3 284 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 32 253 22.714 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 AYJ52_04130 d51084c8e71691a709a1edace72014c3 284 Pfam PF03799 Cell division protein FtsQ 132 245 5.7E-16 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB AYJ52_04130 d51084c8e71691a709a1edace72014c3 284 Gene3D G3DSA:3.10.20.310 59 127 1.3E-12 T 11-10-2018 AYJ52_16525 4da64a5bbe69b54f237de4965570f705 911 Gene3D G3DSA:3.10.20.310 315 402 2.6E-18 T 11-10-2018 AYJ52_16525 4da64a5bbe69b54f237de4965570f705 911 Gene3D G3DSA:3.10.20.310 403 486 3.3E-5 T 11-10-2018 AYJ52_16525 4da64a5bbe69b54f237de4965570f705 911 Pfam PF17243 POTRA domain TamA domain 1 244 313 3.9E-11 T 11-10-2018 IPR035243 TamA, POTRA domain 1 AYJ52_16525 4da64a5bbe69b54f237de4965570f705 911 Pfam PF07244 Surface antigen variable number repeat 323 395 1.7E-4 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AYJ52_16525 4da64a5bbe69b54f237de4965570f705 911 Pfam PF01103 Surface antigen 610 908 2.7E-35 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AYJ52_16525 4da64a5bbe69b54f237de4965570f705 911 Gene3D G3DSA:2.40.160.50 580 911 6.9E-96 T 11-10-2018 AYJ52_05165 39322262d5f66882c709bf6d10533572 203 SUPERFAMILY SSF46689 4 80 9.75E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_05165 39322262d5f66882c709bf6d10533572 203 Gene3D G3DSA:1.10.10.60 1 59 1.3E-18 T 11-10-2018 AYJ52_05165 39322262d5f66882c709bf6d10533572 203 SUPERFAMILY SSF48498 77 203 1.92E-35 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_05165 39322262d5f66882c709bf6d10533572 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 4.3E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05165 39322262d5f66882c709bf6d10533572 203 Gene3D G3DSA:1.10.357.10 60 203 1.2E-45 T 11-10-2018 AYJ52_05165 39322262d5f66882c709bf6d10533572 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.9E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05165 39322262d5f66882c709bf6d10533572 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.9E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05165 39322262d5f66882c709bf6d10533572 203 Pfam PF08362 YcdC-like protein, C-terminal region 60 203 2.5E-52 T 11-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 AYJ52_05500 d4c8091f729c38c7746fb66c6af6d57c 225 SUPERFAMILY SSF52540 1 88 2.37E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_05500 d4c8091f729c38c7746fb66c6af6d57c 225 Pfam PF13521 AAA domain 2 193 2.3E-15 T 11-10-2018 IPR038727 NadR/Ttd14, AAA domain AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 Gene3D G3DSA:3.30.70.1440 655 856 0.0 T 11-10-2018 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 Gene3D G3DSA:3.30.70.1430 40 807 0.0 T 11-10-2018 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 SUPERFAMILY SSF82693 40 134 2.38E-23 T 11-10-2018 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 Gene3D G3DSA:1.20.1640.10 10 504 0.0 T 11-10-2018 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 SUPERFAMILY SSF82714 705 797 1.44E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 SUPERFAMILY SSF82866 290 489 3.01E-47 T 11-10-2018 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 Pfam PF00873 AcrB/AcrD/AcrF family 4 1016 4.2E-272 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 SUPERFAMILY SSF82693 136 323 4.19E-22 T 11-10-2018 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 7.7E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 7.7E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.7E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 7.7E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.7E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 7.7E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 7.7E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 7.7E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 7.7E-63 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 Gene3D G3DSA:1.20.1640.10 505 1013 0.0 T 11-10-2018 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 SUPERFAMILY SSF82714 182 264 4.19E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 SUPERFAMILY SSF82866 796 1018 1.11E-49 T 11-10-2018 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 11-10-2018 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 Gene3D G3DSA:3.30.2090.10 704 799 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 Gene3D G3DSA:3.30.70.1430 559 654 0.0 T 11-10-2018 AYJ52_01505 a5acbffab55b7d4609a7b11463c182ae 1032 SUPERFAMILY SSF82693 558 650 6.63E-13 T 11-10-2018 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 PIRSF PIRSF000654 15 121 1.3E-10 T 11-10-2018 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 PIRSF PIRSF000654 175 222 3.9E-7 T 11-10-2018 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 PIRSF PIRSF000654 95 174 1.0E-7 T 11-10-2018 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 SUPERFAMILY SSF48403 20 221 4.75E-55 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 SMART SM00248 92 121 860.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 SMART SM00248 125 154 0.71 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 SMART SM00248 26 55 8.7 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 SMART SM00248 59 88 5.0E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 SMART SM00248 158 192 0.72 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 SMART SM00248 196 222 1400.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 Pfam PF12796 Ankyrin repeats (3 copies) 24 90 8.9E-11 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 Pfam PF12796 Ankyrin repeats (3 copies) 99 194 6.9E-13 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 PRINTS PR01415 Ankyrin repeat signature 179 193 1.7E-6 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 PRINTS PR01415 Ankyrin repeat signature 126 141 1.7E-6 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AYJ52_12100 5ffa36ea42c12fd1cc1620e43ec03010 222 Gene3D G3DSA:1.25.40.20 26 222 2.5E-62 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AYJ52_14720 b5aa2c58ef3fdb84d89bbd46493a1ef0 458 Gene3D G3DSA:3.40.640.10 79 361 1.0E-153 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_14720 b5aa2c58ef3fdb84d89bbd46493a1ef0 458 Pfam PF00202 Aminotransferase class-III 45 454 4.5E-87 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_14720 b5aa2c58ef3fdb84d89bbd46493a1ef0 458 SUPERFAMILY SSF53383 29 454 4.26E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_14720 b5aa2c58ef3fdb84d89bbd46493a1ef0 458 Gene3D G3DSA:3.90.1150.10 43 450 1.0E-153 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_14720 b5aa2c58ef3fdb84d89bbd46493a1ef0 458 PIRSF PIRSF000521 194 457 1.4E-19 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_14720 b5aa2c58ef3fdb84d89bbd46493a1ef0 458 PIRSF PIRSF000521 46 156 8.4E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_14720 b5aa2c58ef3fdb84d89bbd46493a1ef0 458 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 266 303 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AYJ52_03540 5f0cb6f1329ceddfde86456614d99386 300 SUPERFAMILY SSF103481 46 144 9.15E-13 T 11-10-2018 AYJ52_03540 5f0cb6f1329ceddfde86456614d99386 300 SUPERFAMILY SSF103481 188 284 8.63E-10 T 11-10-2018 AYJ52_03540 5f0cb6f1329ceddfde86456614d99386 300 Pfam PF00892 EamA-like transporter family 152 283 1.7E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_03540 5f0cb6f1329ceddfde86456614d99386 300 Pfam PF00892 EamA-like transporter family 14 141 1.8E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_05290 7e3c5f7d0666a300329188d84196a2e1 142 SMART SM00226 4 141 1.3E-56 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AYJ52_05290 7e3c5f7d0666a300329188d84196a2e1 142 Gene3D G3DSA:3.40.50.2300 1 142 1.2E-45 T 11-10-2018 AYJ52_05290 7e3c5f7d0666a300329188d84196a2e1 142 SUPERFAMILY SSF52788 2 141 7.2E-41 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AYJ52_05290 7e3c5f7d0666a300329188d84196a2e1 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 98 111 1.6E-17 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AYJ52_05290 7e3c5f7d0666a300329188d84196a2e1 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 1.6E-17 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AYJ52_05290 7e3c5f7d0666a300329188d84196a2e1 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 1.6E-17 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AYJ52_05290 7e3c5f7d0666a300329188d84196a2e1 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 1.6E-17 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AYJ52_05290 7e3c5f7d0666a300329188d84196a2e1 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 42 58 1.6E-17 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AYJ52_05290 7e3c5f7d0666a300329188d84196a2e1 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 138 1.9E-37 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AYJ52_10805 61845d59ee763abb9fdab76405f58158 362 Pfam PF05987 Bacterial protein of unknown function (DUF898) 30 355 4.8E-82 T 11-10-2018 IPR010295 Protein of unknown function DUF898 AYJ52_09370 9ee75e636ca28579b9217e3523c8b7fb 231 SUPERFAMILY SSF46785 2 75 3.58E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_09370 9ee75e636ca28579b9217e3523c8b7fb 231 SMART SM00345 13 71 2.6E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_09370 9ee75e636ca28579b9217e3523c8b7fb 231 Pfam PF07729 FCD domain 82 202 7.4E-10 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_09370 9ee75e636ca28579b9217e3523c8b7fb 231 SUPERFAMILY SSF48008 82 213 9.15E-6 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_09370 9ee75e636ca28579b9217e3523c8b7fb 231 Gene3D G3DSA:1.10.10.10 5 73 1.0E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_09370 9ee75e636ca28579b9217e3523c8b7fb 231 Gene3D G3DSA:1.20.120.530 74 215 2.5E-9 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_09370 9ee75e636ca28579b9217e3523c8b7fb 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 1.0E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_15660 6ead1836468f9ae5b34c9b8704d8605c 356 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 11 329 33.239 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AYJ52_15660 6ead1836468f9ae5b34c9b8704d8605c 356 Gene3D G3DSA:3.40.1390.10 1 102 2.9E-36 T 11-10-2018 AYJ52_15660 6ead1836468f9ae5b34c9b8704d8605c 356 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 10 328 8.9E-104 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AYJ52_15660 6ead1836468f9ae5b34c9b8704d8605c 356 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 262 288 0.098 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_15660 6ead1836468f9ae5b34c9b8704d8605c 356 SUPERFAMILY SSF51161 34 320 6.72E-72 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_15660 6ead1836468f9ae5b34c9b8704d8605c 356 Gene3D G3DSA:2.160.10.10 103 312 1.1E-69 T 11-10-2018 AYJ52_15660 6ead1836468f9ae5b34c9b8704d8605c 356 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 29 92 5.6E-19 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AYJ52_15660 6ead1836468f9ae5b34c9b8704d8605c 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 260 1.6E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_15660 6ead1836468f9ae5b34c9b8704d8605c 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 112 145 2.1E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_15660 6ead1836468f9ae5b34c9b8704d8605c 356 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 148 182 1.6E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_16355 7bc4efcb21e33ff6f797871c7d680da1 390 SUPERFAMILY SSF56796 13 389 3.79E-136 T 11-10-2018 AYJ52_16355 7bc4efcb21e33ff6f797871c7d680da1 390 Gene3D G3DSA:1.20.1090.10 193 390 8.9E-78 T 11-10-2018 AYJ52_16355 7bc4efcb21e33ff6f797871c7d680da1 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 20 382 7.6E-127 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AYJ52_16355 7bc4efcb21e33ff6f797871c7d680da1 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 267 287 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AYJ52_16355 7bc4efcb21e33ff6f797871c7d680da1 390 Gene3D G3DSA:3.40.50.1970 3 191 5.5E-55 T 11-10-2018 AYJ52_16355 7bc4efcb21e33ff6f797871c7d680da1 390 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 180 208 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AYJ52_17860 2de03a1dbb7b468032d3fe1d11a804dc 436 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 3 343 3.2E-110 T 11-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AYJ52_17860 2de03a1dbb7b468032d3fe1d11a804dc 436 SUPERFAMILY SSF51905 186 342 7.41E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_17860 2de03a1dbb7b468032d3fe1d11a804dc 436 Gene3D G3DSA:3.50.50.60 1 430 2.8E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_17860 2de03a1dbb7b468032d3fe1d11a804dc 436 SUPERFAMILY SSF51905 2 249 9.86E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_17860 2de03a1dbb7b468032d3fe1d11a804dc 436 TIGRFAM TIGR04439 histamin_N_OH: putative histamine N-monooxygenase 5 434 1.2E-254 T 11-10-2018 IPR031043 Putative histamine N-monooxygenase AYJ52_17940 c86680b42971d22fbf59ff1e7651f868 304 SUPERFAMILY SSF54593 213 301 1.35E-5 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_17940 c86680b42971d22fbf59ff1e7651f868 304 SUPERFAMILY SSF54593 48 165 1.43E-9 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_02310 6f8f51e4352bc315f29485648bc6cc2b 537 SUPERFAMILY SSF52096 278 534 6.63E-73 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_02310 6f8f51e4352bc315f29485648bc6cc2b 537 Gene3D G3DSA:3.90.226.10 272 537 3.2E-90 T 11-10-2018 AYJ52_02310 6f8f51e4352bc315f29485648bc6cc2b 537 Gene3D G3DSA:3.90.226.10 1 271 1.3E-67 T 11-10-2018 AYJ52_02310 6f8f51e4352bc315f29485648bc6cc2b 537 SUPERFAMILY SSF52096 44 275 7.97E-55 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_02310 6f8f51e4352bc315f29485648bc6cc2b 537 Pfam PF01039 Carboxyl transferase domain 49 524 6.8E-119 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AYJ52_04255 0d25279789bcb023b22c7f458b292535 167 PIRSF PIRSF017306 3 165 2.8E-41 T 11-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AYJ52_04255 0d25279789bcb023b22c7f458b292535 167 Gene3D G3DSA:2.60.120.480 4 167 2.0E-52 T 11-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AYJ52_04255 0d25279789bcb023b22c7f458b292535 167 SUPERFAMILY SSF51182 6 163 1.42E-50 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_04255 0d25279789bcb023b22c7f458b292535 167 Pfam PF04115 Ureidoglycolate lyase 4 165 3.2E-48 T 11-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AYJ52_18600 a02405dc73a2cee224ebf1d8c291de96 237 SUPERFAMILY SSF50249 1 69 5.14E-6 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_18600 a02405dc73a2cee224ebf1d8c291de96 237 Gene3D G3DSA:2.40.50.140 4 69 3.5E-10 T 11-10-2018 AYJ52_18600 a02405dc73a2cee224ebf1d8c291de96 237 Pfam PF02565 Recombination protein O C terminal 77 227 3.0E-20 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AYJ52_18600 a02405dc73a2cee224ebf1d8c291de96 237 Pfam PF11967 Recombination protein O N terminal 3 41 1.2E-8 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AYJ52_18600 a02405dc73a2cee224ebf1d8c291de96 237 Gene3D G3DSA:1.20.1440.120 74 237 4.8E-44 T 11-10-2018 AYJ52_18435 d3322c5e1bced1851aafe3bdd45ef3cd 160 Gene3D G3DSA:2.40.10.330 71 121 2.4E-57 T 11-10-2018 AYJ52_18435 d3322c5e1bced1851aafe3bdd45ef3cd 160 SUPERFAMILY SSF54534 4 140 5.5E-39 T 11-10-2018 AYJ52_18435 d3322c5e1bced1851aafe3bdd45ef3cd 160 Gene3D G3DSA:3.10.50.40 4 154 2.4E-57 T 11-10-2018 AYJ52_18435 d3322c5e1bced1851aafe3bdd45ef3cd 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 2.1E-15 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ52_10210 efd5e0766ab51932a2a998b6bf0c3f9d 263 Hamap MF_01265 Probable L-aspartate dehydrogenase [nadX]. 1 263 33.711 T 11-10-2018 IPR020626 L-aspartate dehydrogenase, prokaryotic GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 AYJ52_10210 efd5e0766ab51932a2a998b6bf0c3f9d 263 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 9 116 3.0E-8 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AYJ52_10210 efd5e0766ab51932a2a998b6bf0c3f9d 263 SUPERFAMILY SSF55347 120 233 1.9E-30 T 11-10-2018 AYJ52_10210 efd5e0766ab51932a2a998b6bf0c3f9d 263 PIRSF PIRSF005227 1 263 6.0E-70 T 11-10-2018 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 AYJ52_10210 efd5e0766ab51932a2a998b6bf0c3f9d 263 Pfam PF01958 Domain of unknown function DUF108 164 251 2.7E-32 T 11-10-2018 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21 AYJ52_10210 efd5e0766ab51932a2a998b6bf0c3f9d 263 Gene3D G3DSA:3.40.50.720 6 256 4.6E-68 T 11-10-2018 AYJ52_10210 efd5e0766ab51932a2a998b6bf0c3f9d 263 SUPERFAMILY SSF51735 1 149 3.42E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_10210 efd5e0766ab51932a2a998b6bf0c3f9d 263 Gene3D G3DSA:3.30.360.10 120 238 4.6E-68 T 11-10-2018 AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 Gene3D G3DSA:3.30.70.920 54 137 4.6E-20 T 11-10-2018 AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 SUPERFAMILY SSF54909 61 150 2.55E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 SMART SM00344 1 110 2.8E-46 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.3E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.3E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.3E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.8E-20 T 11-10-2018 AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 Gene3D G3DSA:1.10.10.10 2 52 5.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 SUPERFAMILY SSF46785 1 61 1.7E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12555 591427b47ffed1c008dc7140f0273df7 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 2.3E-18 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ52_16195 01e374b233d56b02b4367e973924a8c3 368 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 155 267 2.6E-16 T 11-10-2018 IPR006528 Phage head morphogenesis domain AYJ52_16195 01e374b233d56b02b4367e973924a8c3 368 Pfam PF04233 Phage Mu protein F like protein 153 264 7.0E-12 T 11-10-2018 IPR006528 Phage head morphogenesis domain AYJ52_14645 1fd6463c1863aa68767b98e780131f32 391 SUPERFAMILY SSF56529 162 373 2.62E-26 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AYJ52_14645 1fd6463c1863aa68767b98e780131f32 391 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 217 365 8.3E-8 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AYJ52_14645 1fd6463c1863aa68767b98e780131f32 391 Gene3D G3DSA:3.90.850.10 148 371 5.4E-44 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AYJ52_15945 10eb8042ec03252beede5c11ddc49926 139 SUPERFAMILY SSF51230 66 136 5.5E-22 T 11-10-2018 IPR011053 Single hybrid motif AYJ52_15945 10eb8042ec03252beede5c11ddc49926 139 Gene3D G3DSA:2.40.50.100 62 136 6.3E-28 T 11-10-2018 AYJ52_15945 10eb8042ec03252beede5c11ddc49926 139 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 136 7.5E-38 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AYJ52_15945 10eb8042ec03252beede5c11ddc49926 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 98 9.3E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AYJ52_15945 10eb8042ec03252beede5c11ddc49926 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 67 80 9.3E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AYJ52_15945 10eb8042ec03252beede5c11ddc49926 139 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 112 9.3E-15 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AYJ52_15945 10eb8042ec03252beede5c11ddc49926 139 Pfam PF00364 Biotin-requiring enzyme 66 136 3.2E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AYJ52_00715 e00e0545a74e24c397f09f8079d4c1d9 309 Pfam PF05661 Protein of unknown function (DUF808) 3 293 5.4E-117 T 11-10-2018 IPR008526 Inner membrane protein YedI AYJ52_00715 e00e0545a74e24c397f09f8079d4c1d9 309 PIRSF PIRSF016660 1 306 1.2E-130 T 11-10-2018 IPR008526 Inner membrane protein YedI AYJ52_01830 ad1bc5708d2e8236375a27b63b756bff 634 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 156 1.6E-23 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_01830 ad1bc5708d2e8236375a27b63b756bff 634 Pfam PF00593 TonB dependent receptor 222 633 2.5E-47 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_01830 ad1bc5708d2e8236375a27b63b756bff 634 Gene3D G3DSA:2.170.130.10 32 161 1.4E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_01830 ad1bc5708d2e8236375a27b63b756bff 634 SUPERFAMILY SSF56935 36 633 2.7E-109 T 11-10-2018 AYJ52_01830 ad1bc5708d2e8236375a27b63b756bff 634 Gene3D G3DSA:2.40.170.20 165 634 8.2E-76 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_18675 66a21db469e8c540e38e20f341db34ca 202 Pfam PF06821 Serine hydrolase 4 178 5.9E-53 T 11-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 AYJ52_18675 66a21db469e8c540e38e20f341db34ca 202 SUPERFAMILY SSF53474 4 179 8.43E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_18675 66a21db469e8c540e38e20f341db34ca 202 Gene3D G3DSA:3.40.50.1820 2 181 1.7E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_01570 965d9c3f9c2110be5ea7bf209e3e7e01 149 Gene3D G3DSA:3.30.530.20 3 147 7.2E-38 T 11-10-2018 IPR023393 START-like domain superfamily AYJ52_01570 965d9c3f9c2110be5ea7bf209e3e7e01 149 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 141 2.1E-25 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AYJ52_01570 965d9c3f9c2110be5ea7bf209e3e7e01 149 SUPERFAMILY SSF55961 3 144 1.57E-41 T 11-10-2018 AYJ52_09675 b1944d5cf9fe463767031aeadd469643 541 Pfam PF00795 Carbon-nitrogen hydrolase 5 244 2.5E-31 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AYJ52_09675 b1944d5cf9fe463767031aeadd469643 541 Gene3D G3DSA:3.40.50.620 261 540 3.7E-110 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_09675 b1944d5cf9fe463767031aeadd469643 541 TIGRFAM TIGR00552 nadE: NAD+ synthetase 270 513 3.5E-58 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AYJ52_09675 b1944d5cf9fe463767031aeadd469643 541 SUPERFAMILY SSF52402 257 523 1.68E-76 T 11-10-2018 AYJ52_09675 b1944d5cf9fe463767031aeadd469643 541 Gene3D G3DSA:3.60.110.10 1 260 4.5E-110 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AYJ52_09675 b1944d5cf9fe463767031aeadd469643 541 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 539 28.261 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AYJ52_09675 b1944d5cf9fe463767031aeadd469643 541 Pfam PF02540 NAD synthase 265 513 5.6E-71 T 11-10-2018 IPR022310 NAD/GMP synthase AYJ52_09675 b1944d5cf9fe463767031aeadd469643 541 SUPERFAMILY SSF56317 1 244 4.84E-61 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AYJ52_09675 b1944d5cf9fe463767031aeadd469643 541 PIRSF PIRSF006630 1 541 1.3E-206 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AYJ52_06435 963d827c0520c7d4f6739d77ffe4184a 99 SMART SM00899 13 93 2.0E-18 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AYJ52_06435 963d827c0520c7d4f6739d77ffe4184a 99 Pfam PF04023 FeoA domain 13 92 5.3E-16 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AYJ52_06435 963d827c0520c7d4f6739d77ffe4184a 99 Gene3D G3DSA:2.30.30.90 12 96 2.3E-24 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain AYJ52_06435 963d827c0520c7d4f6739d77ffe4184a 99 SUPERFAMILY SSF50037 17 93 1.1E-14 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AYJ52_11985 d9b7623409081f51409991925d7a69fa 603 SUPERFAMILY SSF75304 7 439 2.22E-104 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_11985 d9b7623409081f51409991925d7a69fa 603 Gene3D G3DSA:3.90.1300.10 36 433 1.4E-153 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_11985 d9b7623409081f51409991925d7a69fa 603 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 37 584 1.7E-234 T 11-10-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 AYJ52_11985 d9b7623409081f51409991925d7a69fa 603 Gene3D G3DSA:1.20.58.1700 287 358 1.4E-153 T 11-10-2018 AYJ52_11985 d9b7623409081f51409991925d7a69fa 603 Gene3D G3DSA:3.10.490.10 457 593 8.7E-51 T 11-10-2018 AYJ52_11985 d9b7623409081f51409991925d7a69fa 603 Pfam PF01425 Amidase 43 428 1.1E-87 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_03850 0520a816d160494a1f7be27a9c224422 324 Pfam PF03466 LysR substrate binding domain 104 311 6.5E-30 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_03850 0520a816d160494a1f7be27a9c224422 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 79 1.2E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_03850 0520a816d160494a1f7be27a9c224422 324 Gene3D G3DSA:3.40.190.10 107 307 9.6E-43 T 11-10-2018 AYJ52_03850 0520a816d160494a1f7be27a9c224422 324 Gene3D G3DSA:1.10.10.10 19 105 3.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_03850 0520a816d160494a1f7be27a9c224422 324 SUPERFAMILY SSF53850 105 316 2.17E-32 T 11-10-2018 AYJ52_03850 0520a816d160494a1f7be27a9c224422 324 Gene3D G3DSA:3.40.190.10 181 282 9.6E-43 T 11-10-2018 AYJ52_03850 0520a816d160494a1f7be27a9c224422 324 SUPERFAMILY SSF46785 20 102 7.0E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_10680 800a068443ae3e87a28c0471875a9485 247 Gene3D G3DSA:3.90.79.20 3 119 9.9E-22 T 11-10-2018 AYJ52_10680 800a068443ae3e87a28c0471875a9485 247 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 87 118 4.4E-13 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AYJ52_10680 800a068443ae3e87a28c0471875a9485 247 ProSitePatterns PS00893 Nudix box signature. 154 175 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AYJ52_10680 800a068443ae3e87a28c0471875a9485 247 SUPERFAMILY SSF55811 72 239 2.62E-44 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_10680 800a068443ae3e87a28c0471875a9485 247 Pfam PF00293 NUDIX domain 125 229 4.6E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_10680 800a068443ae3e87a28c0471875a9485 247 Gene3D G3DSA:3.90.79.10 120 246 5.8E-39 T 11-10-2018 AYJ52_16685 9c7662eaaac8238bdca3066e73ea9536 341 Gene3D G3DSA:3.30.420.10 172 334 1.7E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_16685 9c7662eaaac8238bdca3066e73ea9536 341 SUPERFAMILY SSF53098 180 326 8.35E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_16685 9c7662eaaac8238bdca3066e73ea9536 341 Pfam PF13936 Helix-turn-helix domain 7 51 2.4E-12 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain AYJ52_16685 9c7662eaaac8238bdca3066e73ea9536 341 Pfam PF00665 Integrase core domain 180 285 2.0E-15 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_15275 0b9655a65bb7c55e31d6853158088cb8 285 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 22 277 1.3E-112 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AYJ52_15275 0b9655a65bb7c55e31d6853158088cb8 285 Gene3D G3DSA:3.20.20.70 3 285 7.7E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_15275 0b9655a65bb7c55e31d6853158088cb8 285 Pfam PF00793 DAHP synthetase I family 14 276 1.0E-70 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AYJ52_15275 0b9655a65bb7c55e31d6853158088cb8 285 SUPERFAMILY SSF51569 8 281 2.29E-99 T 11-10-2018 AYJ52_15275 0b9655a65bb7c55e31d6853158088cb8 285 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 17 279 47.722 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AYJ52_07690 9bec16729166ceb11ea09556c5640c6b 339 Gene3D G3DSA:3.20.20.300 1 337 8.1E-111 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AYJ52_07690 9bec16729166ceb11ea09556c5640c6b 339 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AYJ52_07690 9bec16729166ceb11ea09556c5640c6b 339 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 301 7.1E-73 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AYJ52_07690 9bec16729166ceb11ea09556c5640c6b 339 SUPERFAMILY SSF51445 3 304 5.26E-78 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AYJ52_07690 9bec16729166ceb11ea09556c5640c6b 339 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 4 337 48.24 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AYJ52_03965 ffea2d9d448d63c37260d40af850d24c 571 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 68 489 1.1E-62 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AYJ52_03965 ffea2d9d448d63c37260d40af850d24c 571 Pfam PF00474 Sodium:solute symporter family 68 489 4.6E-112 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AYJ52_03965 ffea2d9d448d63c37260d40af850d24c 571 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 183 208 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AYJ52_03965 ffea2d9d448d63c37260d40af850d24c 571 Gene3D G3DSA:1.20.1730.10 55 568 7.5E-62 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AYJ52_05905 f5597c2585d17c0877931914d9e8af50 377 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 78 295 8.1E-72 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AYJ52_05905 f5597c2585d17c0877931914d9e8af50 377 SUPERFAMILY SSF102405 89 295 1.51E-41 T 11-10-2018 AYJ52_05905 f5597c2585d17c0877931914d9e8af50 377 Gene3D G3DSA:3.40.50.450 3 297 5.2E-93 T 11-10-2018 AYJ52_05905 f5597c2585d17c0877931914d9e8af50 377 Pfam PF02481 DNA recombination-mediator protein A 86 286 2.5E-74 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AYJ52_07625 f76eb4c76a440f01f38ba84c83551603 238 Pfam PF11008 Protein of unknown function (DUF2846) 55 163 1.9E-25 T 11-10-2018 IPR022548 Domain of unknown function DUF2846 AYJ52_16440 1ba38be6bc263f326148a5711d4863fd 157 SUPERFAMILY SSF52540 24 127 5.99E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16440 1ba38be6bc263f326148a5711d4863fd 157 Gene3D G3DSA:3.40.50.300 3 154 1.6E-40 T 11-10-2018 AYJ52_16440 1ba38be6bc263f326148a5711d4863fd 157 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 134 1.1E-40 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AYJ52_16440 1ba38be6bc263f326148a5711d4863fd 157 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 131 5.6E-38 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AYJ52_19300 4695fbc9f4edd85431fd4639b7aede9a 272 SUPERFAMILY SSF53955 136 244 1.03E-12 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_19300 4695fbc9f4edd85431fd4639b7aede9a 272 Pfam PF01464 Transglycosylase SLT domain 139 234 4.9E-6 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.5E-68 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 Gene3D G3DSA:2.40.50.140 1 124 2.5E-62 T 11-10-2018 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 4.7E-42 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.231 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 PIRSF PIRSF002133 1 124 5.3E-53 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_09700 6b8c2fe7ef2de4eaab290fe6d81c5d81 124 SUPERFAMILY SSF50249 3 123 6.85E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_05205 11ce3292552ca362fb3811864ae3f2c0 137 Pfam PF11776 Nickel/cobalt transporter regulator 84 133 1.1E-16 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AYJ52_05205 11ce3292552ca362fb3811864ae3f2c0 137 Gene3D G3DSA:3.10.450.160 69 136 5.7E-13 T 11-10-2018 AYJ52_05205 11ce3292552ca362fb3811864ae3f2c0 137 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 79 132 2.0E-19 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AYJ52_17620 5a40ba7c08de3f879cdbcecc1939e296 820 Gene3D G3DSA:2.40.110.10 241 365 5.8E-93 T 11-10-2018 AYJ52_17620 5a40ba7c08de3f879cdbcecc1939e296 820 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 366 507 9.8E-13 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_17620 5a40ba7c08de3f879cdbcecc1939e296 820 Pfam PF09317 Domain of unknown function (DUF1974) 520 804 8.9E-97 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AYJ52_17620 5a40ba7c08de3f879cdbcecc1939e296 820 SUPERFAMILY SSF56645 125 361 9.29E-44 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_17620 5a40ba7c08de3f879cdbcecc1939e296 820 Gene3D G3DSA:1.20.140.10 366 512 5.8E-93 T 11-10-2018 AYJ52_17620 5a40ba7c08de3f879cdbcecc1939e296 820 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 130 238 5.1E-17 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_17620 5a40ba7c08de3f879cdbcecc1939e296 820 SUPERFAMILY SSF47203 366 517 1.8E-23 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_17620 5a40ba7c08de3f879cdbcecc1939e296 820 Gene3D G3DSA:1.10.540.10 127 240 5.8E-93 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_01460 898eeebfaacc83b0b67d00db67af748c 128 Pfam PF13586 Transposase DDE domain 44 126 3.9E-11 T 11-10-2018 IPR025668 Transposase DDE domain AYJ52_08110 898eeebfaacc83b0b67d00db67af748c 128 Pfam PF13586 Transposase DDE domain 44 126 3.9E-11 T 11-10-2018 IPR025668 Transposase DDE domain AYJ52_00385 898eeebfaacc83b0b67d00db67af748c 128 Pfam PF13586 Transposase DDE domain 44 126 3.9E-11 T 11-10-2018 IPR025668 Transposase DDE domain AYJ52_10795 898eeebfaacc83b0b67d00db67af748c 128 Pfam PF13586 Transposase DDE domain 44 126 3.9E-11 T 11-10-2018 IPR025668 Transposase DDE domain AYJ52_00045 898eeebfaacc83b0b67d00db67af748c 128 Pfam PF13586 Transposase DDE domain 44 126 3.9E-11 T 11-10-2018 IPR025668 Transposase DDE domain AYJ52_01325 898eeebfaacc83b0b67d00db67af748c 128 Pfam PF13586 Transposase DDE domain 44 126 3.9E-11 T 11-10-2018 IPR025668 Transposase DDE domain AYJ52_13025 f88ae4d436fcc96a051182f9f83482df 277 Gene3D G3DSA:3.40.190.10 119 224 2.4E-66 T 11-10-2018 AYJ52_13025 f88ae4d436fcc96a051182f9f83482df 277 Pfam PF03180 NLPA lipoprotein 39 270 6.4E-66 T 11-10-2018 IPR004872 Lipoprotein NlpA family AYJ52_13025 f88ae4d436fcc96a051182f9f83482df 277 SUPERFAMILY SSF53850 39 272 8.45E-64 T 11-10-2018 AYJ52_13025 f88ae4d436fcc96a051182f9f83482df 277 Gene3D G3DSA:3.40.190.10 42 267 2.4E-66 T 11-10-2018 AYJ52_08765 2da28c3117c90a3a7f449468059c0c6f 182 Gene3D G3DSA:2.20.70.10 1 35 2.5E-12 T 11-10-2018 AYJ52_08765 2da28c3117c90a3a7f449468059c0c6f 182 Pfam PF14803 Nudix N-terminal 3 35 6.5E-14 T 11-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 AYJ52_08765 2da28c3117c90a3a7f449468059c0c6f 182 SUPERFAMILY SSF55811 3 163 2.17E-35 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_08765 2da28c3117c90a3a7f449468059c0c6f 182 Gene3D G3DSA:3.90.79.10 36 180 2.9E-36 T 11-10-2018 AYJ52_08765 2da28c3117c90a3a7f449468059c0c6f 182 Pfam PF00293 NUDIX domain 43 141 1.6E-9 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_05010 cb3b163a91bbc018807627436c6ebed0 121 PIRSF PIRSF021239 7 121 1.5E-46 T 11-10-2018 IPR007437 Protein of unknown function DUF486 AYJ52_05010 cb3b163a91bbc018807627436c6ebed0 121 Pfam PF04342 Putative member of DMT superfamily (DUF486) 15 118 3.3E-38 T 11-10-2018 IPR007437 Protein of unknown function DUF486 AYJ52_04160 67785c122392e2da0e2dbb6e9951af85 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 174 1.5E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_04160 67785c122392e2da0e2dbb6e9951af85 728 Pfam PF00593 TonB dependent receptor 247 727 5.3E-55 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_04160 67785c122392e2da0e2dbb6e9951af85 728 SUPERFAMILY SSF56935 72 728 1.17E-117 T 11-10-2018 AYJ52_04160 67785c122392e2da0e2dbb6e9951af85 728 Gene3D G3DSA:2.40.170.20 185 728 2.7E-100 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_04160 67785c122392e2da0e2dbb6e9951af85 728 Gene3D G3DSA:2.170.130.10 62 184 3.6E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_04160 67785c122392e2da0e2dbb6e9951af85 728 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 80 728 1.2E-88 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_10335 4a9a83131ae644c2bc31a15f3bb728bb 754 SUPERFAMILY SSF56935 46 754 3.36E-127 T 11-10-2018 AYJ52_10335 4a9a83131ae644c2bc31a15f3bb728bb 754 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 175 1.7E-28 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_10335 4a9a83131ae644c2bc31a15f3bb728bb 754 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 754 1.8E-68 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AYJ52_10335 4a9a83131ae644c2bc31a15f3bb728bb 754 Pfam PF00593 TonB dependent receptor 293 753 3.5E-53 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_10335 4a9a83131ae644c2bc31a15f3bb728bb 754 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 737 754 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AYJ52_10335 4a9a83131ae644c2bc31a15f3bb728bb 754 Gene3D G3DSA:2.170.130.10 39 180 7.4E-44 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_10335 4a9a83131ae644c2bc31a15f3bb728bb 754 Gene3D G3DSA:2.40.170.20 186 754 8.0E-183 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ52_18315 3728250538683d6d3c72af039eb14d17 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 85 1.7E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_18315 3728250538683d6d3c72af039eb14d17 231 Gene3D G3DSA:1.10.10.60 25 77 9.8E-17 T 11-10-2018 AYJ52_18315 3728250538683d6d3c72af039eb14d17 231 SUPERFAMILY SSF46689 27 101 7.63E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_18315 3728250538683d6d3c72af039eb14d17 231 Gene3D G3DSA:1.10.357.10 78 230 3.6E-27 T 11-10-2018 AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 381 387 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 Gene3D G3DSA:3.40.50.150 276 510 2.1E-20 T 11-10-2018 AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 SUPERFAMILY SSF52540 708 894 4.72E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 SUPERFAMILY SSF52540 1198 1375 4.43E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 Gene3D G3DSA:3.40.50.300 1197 1347 3.3E-5 T 11-10-2018 AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 SUPERFAMILY SSF53335 250 499 2.36E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 Pfam PF13871 C-terminal domain on Strawberry notch homologue 1210 1443 7.4E-16 T 11-10-2018 IPR026937 Strawberry notch, helicase C domain AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 378 390 5.7E-6 T 11-10-2018 AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 411 435 5.7E-6 T 11-10-2018 AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 309 323 5.7E-6 T 11-10-2018 AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 281 297 5.7E-6 T 11-10-2018 AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 Pfam PF02384 N-6 DNA Methylase 282 485 3.2E-9 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AYJ52_19480 11348beadf3e94c708209a229c85612c 1973 Pfam PF13872 P-loop containing NTP hydrolase pore-1 719 959 1.2E-13 T 11-10-2018 IPR039187 Strawberry notch, AAA domain AYJ52_01865 f20ad4083a39c3ab30f3efa185d0b3f0 228 SMART SM00862 144 223 1.4E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_01865 f20ad4083a39c3ab30f3efa185d0b3f0 228 Pfam PF00072 Response regulator receiver domain 4 113 5.8E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_01865 f20ad4083a39c3ab30f3efa185d0b3f0 228 SMART SM00448 2 112 1.5E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_01865 f20ad4083a39c3ab30f3efa185d0b3f0 228 Gene3D G3DSA:1.10.10.10 121 225 1.1E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_01865 f20ad4083a39c3ab30f3efa185d0b3f0 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 223 6.9E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_01865 f20ad4083a39c3ab30f3efa185d0b3f0 228 SUPERFAMILY SSF52172 1 126 2.13E-41 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_01865 f20ad4083a39c3ab30f3efa185d0b3f0 228 SUPERFAMILY SSF46894 122 225 4.82E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_01865 f20ad4083a39c3ab30f3efa185d0b3f0 228 Gene3D G3DSA:3.40.50.2300 1 120 8.4E-37 T 11-10-2018 AYJ52_18845 da81481e9e9010a583019d7e5b20aefd 267 Pfam PF01636 Phosphotransferase enzyme family 17 258 1.2E-29 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AYJ52_18845 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.30.200.20 8 83 2.0E-16 T 11-10-2018 AYJ52_18845 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.90.1200.10 84 264 4.5E-53 T 11-10-2018 AYJ52_18845 da81481e9e9010a583019d7e5b20aefd 267 PIRSF PIRSF000706 2 265 9.9E-81 T 11-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 AYJ52_18845 da81481e9e9010a583019d7e5b20aefd 267 SUPERFAMILY SSF56112 6 263 1.9E-42 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_06780 e036c226718d7fbf9f2f1e49c353741c 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 85 1.3E-17 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AYJ52_06780 e036c226718d7fbf9f2f1e49c353741c 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AYJ52_06780 e036c226718d7fbf9f2f1e49c353741c 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 8 193 1.9E-53 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AYJ52_06780 e036c226718d7fbf9f2f1e49c353741c 195 Gene3D G3DSA:1.20.120.1760 5 188 6.6E-14 T 11-10-2018 AYJ52_06780 e036c226718d7fbf9f2f1e49c353741c 195 PIRSF PIRSF000847 4 195 1.7E-47 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AYJ52_19670 7d6e6472b99b3c0328bbf793355d8b81 98 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 3 95 3.4E-36 T 11-10-2018 IPR014056 Addiction module killer protein, predicted AYJ52_19670 7d6e6472b99b3c0328bbf793355d8b81 98 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 92 4.1E-7 T 11-10-2018 IPR009241 Toxin HigB-like AYJ52_19670 7d6e6472b99b3c0328bbf793355d8b81 98 PIRSF PIRSF028744 1 98 8.0E-37 T 11-10-2018 IPR014056 Addiction module killer protein, predicted AYJ52_08205 be9758db5a8a2cddd0f9b9f2f8192f36 338 Gene3D G3DSA:3.20.20.70 10 251 1.2E-71 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_08205 be9758db5a8a2cddd0f9b9f2f8192f36 338 Pfam PF01207 Dihydrouridine synthase (Dus) 17 313 1.5E-87 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AYJ52_08205 be9758db5a8a2cddd0f9b9f2f8192f36 338 Gene3D G3DSA:1.20.120.1460 254 328 2.2E-18 T 11-10-2018 AYJ52_08205 be9758db5a8a2cddd0f9b9f2f8192f36 338 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AYJ52_08205 be9758db5a8a2cddd0f9b9f2f8192f36 338 SUPERFAMILY SSF51395 13 323 2.63E-70 T 11-10-2018 AYJ52_08205 be9758db5a8a2cddd0f9b9f2f8192f36 338 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 9 331 48.821 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AYJ52_08205 be9758db5a8a2cddd0f9b9f2f8192f36 338 PIRSF PIRSF006621 2 335 5.8E-75 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AYJ52_08205 be9758db5a8a2cddd0f9b9f2f8192f36 338 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 14 316 9.6E-141 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AYJ52_10760 8b7cd09b9c6e4f030f0021dfa724122c 420 Gene3D G3DSA:3.30.70.270 234 410 1.7E-52 T 11-10-2018 AYJ52_10760 8b7cd09b9c6e4f030f0021dfa724122c 420 SUPERFAMILY SSF55073 253 411 1.33E-46 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_10760 8b7cd09b9c6e4f030f0021dfa724122c 420 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 411 4.7E-52 T 11-10-2018 IPR000160 GGDEF domain AYJ52_10760 8b7cd09b9c6e4f030f0021dfa724122c 420 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 408 2.5E-48 T 11-10-2018 IPR000160 GGDEF domain AYJ52_10760 8b7cd09b9c6e4f030f0021dfa724122c 420 SMART SM00267 238 412 2.3E-56 T 11-10-2018 IPR000160 GGDEF domain AYJ52_14760 9266221d6942e6e974db07b53c38be31 325 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AYJ52_14760 9266221d6942e6e974db07b53c38be31 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 310 3.1E-21 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AYJ52_14760 9266221d6942e6e974db07b53c38be31 325 Gene3D G3DSA:3.40.50.720 97 287 4.2E-100 T 11-10-2018 AYJ52_14760 9266221d6942e6e974db07b53c38be31 325 SUPERFAMILY SSF51735 104 286 3.3E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14760 9266221d6942e6e974db07b53c38be31 325 Gene3D G3DSA:3.40.50.720 16 303 4.2E-100 T 11-10-2018 AYJ52_14760 9266221d6942e6e974db07b53c38be31 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 285 6.9E-63 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AYJ52_14760 9266221d6942e6e974db07b53c38be31 325 SUPERFAMILY SSF52283 1 135 2.65E-27 T 11-10-2018 AYJ52_14760 9266221d6942e6e974db07b53c38be31 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AYJ52_17495 c336f627323ab76f1e197d912bec8f27 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 6 416 53.286 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AYJ52_17495 c336f627323ab76f1e197d912bec8f27 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AYJ52_17495 c336f627323ab76f1e197d912bec8f27 417 Gene3D G3DSA:3.40.640.10 36 288 1.0E-187 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_17495 c336f627323ab76f1e197d912bec8f27 417 Pfam PF00464 Serine hydroxymethyltransferase 7 385 6.8E-183 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AYJ52_17495 c336f627323ab76f1e197d912bec8f27 417 Gene3D G3DSA:3.90.1150.10 9 394 1.0E-187 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_17495 c336f627323ab76f1e197d912bec8f27 417 PIRSF PIRSF000412 2 417 4.7E-170 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AYJ52_17495 c336f627323ab76f1e197d912bec8f27 417 SUPERFAMILY SSF53383 4 415 3.16E-184 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_16470 ea0f9043a1825f541a6e96c0f98a385b 150 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 6 150 18.043 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame AYJ52_16470 ea0f9043a1825f541a6e96c0f98a385b 150 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 22 133 1.0E-40 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame AYJ52_16470 ea0f9043a1825f541a6e96c0f98a385b 150 Pfam PF04284 Protein of unknown function (DUF441) 10 148 5.5E-46 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 SUPERFAMILY SSF51905 202 514 5.7E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 504 3.5E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PIRSF PIRSF000238 1 521 1.0E-256 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 Gene3D G3DSA:3.50.50.60 212 509 3.4E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 8.5E-39 T 11-10-2018 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 8.5E-39 T 11-10-2018 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 8.5E-39 T 11-10-2018 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 8.5E-39 T 11-10-2018 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 8.5E-39 T 11-10-2018 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 2.0E-234 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 Pfam PF13192 Thioredoxin domain 119 194 1.4E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 Gene3D G3DSA:3.40.30.80 1 199 9.0E-64 T 11-10-2018 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 1.8E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 SUPERFAMILY SSF52833 1 100 6.71E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 SUPERFAMILY SSF52833 103 195 1.34E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_11290 74f029c603623b9b84db3312e89f70dc 521 Gene3D G3DSA:3.50.50.60 327 450 3.4E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10935 9ac206a6df7bd406b415246b02fbc958 515 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 111 513 1.2E-140 T 11-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AYJ52_10935 9ac206a6df7bd406b415246b02fbc958 515 SMART SM00858 13 84 7.9E-8 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AYJ52_10935 9ac206a6df7bd406b415246b02fbc958 515 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 6 515 4.7E-266 T 11-10-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 AYJ52_10935 9ac206a6df7bd406b415246b02fbc958 515 Gene3D G3DSA:3.90.1210.30 5 83 3.4E-21 T 11-10-2018 AYJ52_10935 9ac206a6df7bd406b415246b02fbc958 515 Pfam PF08666 SAF domain 13 81 3.3E-8 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AYJ52_00335 2b64e121d45e247f729dfed2491512eb 320 SMART SM00849 82 290 1.3E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_00335 2b64e121d45e247f729dfed2491512eb 320 Pfam PF00753 Metallo-beta-lactamase superfamily 81 276 2.6E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_00335 2b64e121d45e247f729dfed2491512eb 320 Gene3D G3DSA:3.60.15.10 26 316 1.3E-103 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_00335 2b64e121d45e247f729dfed2491512eb 320 SUPERFAMILY SSF56281 22 304 1.19E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_09290 dbd608caea9821f542c49481988e5e5b 290 Gene3D G3DSA:3.40.50.1580 41 287 4.2E-72 T 11-10-2018 AYJ52_09290 dbd608caea9821f542c49481988e5e5b 290 SUPERFAMILY SSF53167 44 265 1.7E-43 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AYJ52_09290 dbd608caea9821f542c49481988e5e5b 290 Pfam PF01048 Phosphorylase superfamily 44 260 8.2E-38 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AYJ52_01045 1d1a7dd3c1e99578470aac46c7da7b4b 153 SUPERFAMILY SSF141322 85 149 8.63E-7 T 11-10-2018 AYJ52_01045 1d1a7dd3c1e99578470aac46c7da7b4b 153 Gene3D G3DSA:2.40.50.140 77 152 2.3E-9 T 11-10-2018 AYJ52_01045 1d1a7dd3c1e99578470aac46c7da7b4b 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 9 149 7.1E-16 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain AYJ52_12470 8fb512a5cce806dca206939e84286458 412 Gene3D G3DSA:3.40.50.1110 165 412 8.0E-32 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AYJ52_12470 8fb512a5cce806dca206939e84286458 412 SUPERFAMILY SSF52266 193 404 5.16E-44 T 11-10-2018 AYJ52_12470 8fb512a5cce806dca206939e84286458 412 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 203 398 2.7E-22 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain AYJ52_08150 5e826c1cf6c22ee282c7114a267b28d5 70 SUPERFAMILY SSF46785 3 50 2.31E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_08150 5e826c1cf6c22ee282c7114a267b28d5 70 SMART SM00843 2 59 0.0083 T 11-10-2018 IPR018541 FtsK gamma domain AYJ52_08150 5e826c1cf6c22ee282c7114a267b28d5 70 Gene3D G3DSA:1.10.10.10 1 55 4.6E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_08150 5e826c1cf6c22ee282c7114a267b28d5 70 Pfam PF09397 Ftsk gamma domain 2 51 4.5E-10 T 11-10-2018 IPR018541 FtsK gamma domain AYJ52_15110 5c7b16c6ad1a06a3f60c5188452337a6 232 PIRSF PIRSF000709 1 75 0.0013 T 11-10-2018 AYJ52_15110 5c7b16c6ad1a06a3f60c5188452337a6 232 Gene3D G3DSA:3.40.50.1240 1 227 6.9E-30 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AYJ52_15110 5c7b16c6ad1a06a3f60c5188452337a6 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 217 1.8E-17 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AYJ52_15110 5c7b16c6ad1a06a3f60c5188452337a6 232 SMART SM00855 3 176 3.5E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AYJ52_15110 5c7b16c6ad1a06a3f60c5188452337a6 232 SUPERFAMILY SSF53254 1 222 4.06E-32 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AYJ52_09075 4f112ba501141416be1d8764a22284c9 552 SUPERFAMILY SSF48208 211 420 2.93E-14 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AYJ52_11065 40e8c87054e26e7c3848eefe1cc61cd6 297 Pfam PF07859 alpha/beta hydrolase fold 69 270 1.6E-56 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AYJ52_11065 40e8c87054e26e7c3848eefe1cc61cd6 297 SUPERFAMILY SSF53474 20 293 3.27E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_11065 40e8c87054e26e7c3848eefe1cc61cd6 297 Gene3D G3DSA:3.40.50.1820 6 297 4.5E-80 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_11065 40e8c87054e26e7c3848eefe1cc61cd6 297 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 69 85 - T 11-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 AYJ52_18270 c870e9edf12e671ba6dcb9120c0a6e2b 459 Pfam PF00324 Amino acid permease 17 449 5.1E-110 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_18270 c870e9edf12e671ba6dcb9120c0a6e2b 459 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_18270 c870e9edf12e671ba6dcb9120c0a6e2b 459 Gene3D G3DSA:1.20.1740.10 9 458 2.1E-57 T 11-10-2018 AYJ52_18270 c870e9edf12e671ba6dcb9120c0a6e2b 459 PIRSF PIRSF006060 1 459 3.9E-70 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_02585 ca856236dc39419630b3c2e5826989ea 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02585 ca856236dc39419630b3c2e5826989ea 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 8.4E-21 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02585 ca856236dc39419630b3c2e5826989ea 38 Pfam PF00444 Ribosomal protein L36 1 38 2.5E-19 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02585 ca856236dc39419630b3c2e5826989ea 38 SUPERFAMILY SSF57840 1 38 1.11E-16 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02585 ca856236dc39419630b3c2e5826989ea 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 4.0E-10 T 11-10-2018 AYJ52_02585 ca856236dc39419630b3c2e5826989ea 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.47 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_13620 3643697780fd8ea623c413e270bb7c82 380 Gene3D G3DSA:1.10.3720.10 165 379 2.4E-21 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_13620 3643697780fd8ea623c413e270bb7c82 380 SUPERFAMILY SSF161098 175 363 7.06E-22 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_13620 3643697780fd8ea623c413e270bb7c82 380 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 58 3.0E-6 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AYJ52_13620 3643697780fd8ea623c413e270bb7c82 380 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 380 3.1E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_06085 5b5f6b5057a2c0eb0fe13b36fab13438 559 SUPERFAMILY SSF56801 20 558 1.24E-148 T 11-10-2018 AYJ52_06085 5b5f6b5057a2c0eb0fe13b36fab13438 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 475 549 1.4E-18 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_06085 5b5f6b5057a2c0eb0fe13b36fab13438 559 Gene3D G3DSA:3.40.50.12780 13 462 2.2E-112 T 11-10-2018 AYJ52_06085 5b5f6b5057a2c0eb0fe13b36fab13438 559 Pfam PF00501 AMP-binding enzyme 31 466 3.3E-107 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_06085 5b5f6b5057a2c0eb0fe13b36fab13438 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_06085 5b5f6b5057a2c0eb0fe13b36fab13438 559 Gene3D G3DSA:3.30.300.310 463 559 5.5E-33 T 11-10-2018 AYJ52_07670 a994d124d67810a290bf16306d0ea68b 542 Pfam PF00171 Aldehyde dehydrogenase family 63 506 7.6E-96 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_07670 a994d124d67810a290bf16306d0ea68b 542 Gene3D G3DSA:3.40.605.10 66 502 3.6E-101 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_07670 a994d124d67810a290bf16306d0ea68b 542 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 314 325 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_07670 a994d124d67810a290bf16306d0ea68b 542 SUPERFAMILY SSF53720 34 508 8.25E-102 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_07670 a994d124d67810a290bf16306d0ea68b 542 Gene3D G3DSA:3.40.309.10 290 481 3.6E-101 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_09930 21461918a90bd0d817a410ecf6c20854 700 Pfam PF07728 AAA domain (dynein-related subfamily) 402 584 8.6E-17 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AYJ52_09930 21461918a90bd0d817a410ecf6c20854 700 SUPERFAMILY SSF52540 399 587 1.92E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_05705 4919b9b24d37474cfe2f9c5707819079 130 PIRSF PIRSF005610 1 126 3.5E-8 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AYJ52_05705 4919b9b24d37474cfe2f9c5707819079 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 127 1.0E-17 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AYJ52_15975 e531d2c98350b952a28328695d4f08b6 235 SUPERFAMILY SSF49354 18 141 2.01E-21 T 11-10-2018 IPR008962 PapD-like superfamily AYJ52_15975 e531d2c98350b952a28328695d4f08b6 235 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 1.3E-17 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AYJ52_15975 e531d2c98350b952a28328695d4f08b6 235 Gene3D G3DSA:2.60.40.10 33 144 5.1E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_08175 e34c79e6f2a1eb33a4963bb23e6f10ec 314 Gene3D G3DSA:3.90.640.20 206 300 3.0E-27 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily AYJ52_08175 e34c79e6f2a1eb33a4963bb23e6f10ec 314 Gene3D G3DSA:3.30.565.40 43 205 1.1E-28 T 11-10-2018 AYJ52_08175 e34c79e6f2a1eb33a4963bb23e6f10ec 314 Pfam PF11738 Protein of unknown function (DUF3298) 208 286 4.9E-10 T 11-10-2018 IPR021729 Domain of unknown function DUF3298 AYJ52_04865 afeb773ba4dedeef6bab222caa969836 111 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 110 1.9E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AYJ52_04865 afeb773ba4dedeef6bab222caa969836 111 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 106 1.7E-18 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AYJ52_04865 afeb773ba4dedeef6bab222caa969836 111 Gene3D G3DSA:2.60.300.12 6 111 6.1E-33 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AYJ52_04865 afeb773ba4dedeef6bab222caa969836 111 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 92 109 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AYJ52_04865 afeb773ba4dedeef6bab222caa969836 111 SUPERFAMILY SSF89360 3 97 2.35E-30 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AYJ52_04865 afeb773ba4dedeef6bab222caa969836 111 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 111 33.22 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AYJ52_08715 c7af84438c56996508e56ccdfc85cf5b 227 Gene3D G3DSA:3.40.190.10 112 193 1.2E-70 T 11-10-2018 AYJ52_08715 c7af84438c56996508e56ccdfc85cf5b 227 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 21 201 1.2E-57 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AYJ52_08715 c7af84438c56996508e56ccdfc85cf5b 227 Gene3D G3DSA:3.40.190.10 22 213 1.2E-70 T 11-10-2018 AYJ52_08715 c7af84438c56996508e56ccdfc85cf5b 227 SUPERFAMILY SSF53850 19 224 6.08E-65 T 11-10-2018 AYJ52_08715 c7af84438c56996508e56ccdfc85cf5b 227 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 20 225 54.693 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AYJ52_08715 c7af84438c56996508e56ccdfc85cf5b 227 Pfam PF01634 ATP phosphoribosyltransferase 70 221 3.5E-50 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AYJ52_08715 c7af84438c56996508e56ccdfc85cf5b 227 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 160 181 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AYJ52_06765 ac3c986ad38eae25b562578589fff289 176 Gene3D G3DSA:3.90.1720.10 58 174 4.3E-30 T 11-10-2018 AYJ52_10045 7cc06fdef7c46726b406959b6fd69fc7 292 Gene3D G3DSA:3.20.20.330 1 292 5.1E-67 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AYJ52_10045 7cc06fdef7c46726b406959b6fd69fc7 292 SUPERFAMILY SSF82282 2 291 6.15E-75 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AYJ52_10045 7cc06fdef7c46726b406959b6fd69fc7 292 PIRSF PIRSF037505 1 291 7.3E-9 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AYJ52_10045 7cc06fdef7c46726b406959b6fd69fc7 292 Pfam PF02574 Homocysteine S-methyltransferase 3 288 1.2E-55 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AYJ52_02375 97e243ff453ef2ebab6e3cd284d70efa 277 Gene3D G3DSA:1.20.120.1760 35 188 6.7E-12 T 11-10-2018 AYJ52_02375 97e243ff453ef2ebab6e3cd284d70efa 277 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 52 216 3.2E-38 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AYJ52_02375 97e243ff453ef2ebab6e3cd284d70efa 277 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 86 108 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AYJ52_02375 97e243ff453ef2ebab6e3cd284d70efa 277 Pfam PF01066 CDP-alcohol phosphatidyltransferase 45 108 5.5E-13 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AYJ52_08430 f082baf99dab04f146efdb8f6e4003e0 272 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 253 1.8E-73 T 11-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like AYJ52_08430 f082baf99dab04f146efdb8f6e4003e0 272 SUPERFAMILY SSF53098 4 220 9.19E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_08430 f082baf99dab04f146efdb8f6e4003e0 272 Gene3D G3DSA:3.30.420.10 5 213 1.7E-19 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 735 5.2E-302 T 11-10-2018 AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 469 9.5E-135 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 Gene3D G3DSA:2.120.10.90 501 736 1.7E-14 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 SMART SM00434 12 462 2.7E-220 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 Gene3D G3DSA:3.30.1360.40 239 332 3.8E-175 T 11-10-2018 AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 Gene3D G3DSA:3.90.199.10 33 484 3.8E-175 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 Gene3D G3DSA:1.10.268.10 370 455 3.8E-175 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 SUPERFAMILY SSF101904 498 735 1.7E-45 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 689 2.1E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 621 2.5 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 5 736 32.918 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AYJ52_06080 835425d7a8486e9a287e941d1d2703ea 739 SUPERFAMILY SSF56719 32 484 3.53E-153 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AYJ52_03995 4598a0b04200afcb83917897fa619ee0 370 Pfam PF00296 Luciferase-like monooxygenase 9 328 4.1E-70 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AYJ52_03995 4598a0b04200afcb83917897fa619ee0 370 SUPERFAMILY SSF51679 5 357 1.14E-86 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AYJ52_03995 4598a0b04200afcb83917897fa619ee0 370 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 8 356 8.6E-184 T 11-10-2018 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG KEGG: 00920+1.14.14.35|MetaCyc: PWY-6059 AYJ52_03995 4598a0b04200afcb83917897fa619ee0 370 Gene3D G3DSA:3.20.20.30 4 359 8.4E-106 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AYJ52_00105 b1886182739846451a7d20eba92a6ef3 302 Pfam PF00892 EamA-like transporter family 149 285 7.4E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_00105 b1886182739846451a7d20eba92a6ef3 302 Pfam PF00892 EamA-like transporter family 10 137 8.0E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_00105 b1886182739846451a7d20eba92a6ef3 302 SUPERFAMILY SSF103481 190 288 6.54E-11 T 11-10-2018 AYJ52_00105 b1886182739846451a7d20eba92a6ef3 302 SUPERFAMILY SSF103481 40 142 1.27E-14 T 11-10-2018 AYJ52_08545 7d38b24fd62b114e809ba5e6f8f1fb4d 167 Pfam PF00583 Acetyltransferase (GNAT) family 53 142 2.3E-11 T 11-10-2018 IPR000182 GNAT domain AYJ52_08545 7d38b24fd62b114e809ba5e6f8f1fb4d 167 Gene3D G3DSA:3.40.630.30 8 167 7.7E-29 T 11-10-2018 AYJ52_08545 7d38b24fd62b114e809ba5e6f8f1fb4d 167 SUPERFAMILY SSF55729 5 158 1.16E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_07550 b990bae08f54702174df0b8f8a61b99e 650 Pfam PF05787 Bacterial protein of unknown function (DUF839) 207 592 5.8E-19 T 11-10-2018 IPR008557 Protein of unknown function DUF839 AYJ52_01825 a793a47522b389ee02c25dbf7b3675e4 222 SUPERFAMILY SSF51366 10 213 1.15E-61 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AYJ52_01825 a793a47522b389ee02c25dbf7b3675e4 222 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 9 216 40.049 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AYJ52_01825 a793a47522b389ee02c25dbf7b3675e4 222 Gene3D G3DSA:3.20.20.70 7 218 5.6E-66 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_01825 a793a47522b389ee02c25dbf7b3675e4 222 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 211 4.8E-59 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AYJ52_01520 a36eb5e5167221d58578395749ff4d3e 114 Gene3D G3DSA:2.30.30.40 42 114 3.1E-33 T 11-10-2018 AYJ52_01520 a36eb5e5167221d58578395749ff4d3e 114 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 114 6.9E-50 T 11-10-2018 IPR004624 PhnA protein AYJ52_01520 a36eb5e5167221d58578395749ff4d3e 114 SUPERFAMILY SSF57783 1 35 1.0E-14 T 11-10-2018 AYJ52_01520 a36eb5e5167221d58578395749ff4d3e 114 Pfam PF03831 PhnA domain 44 114 1.1E-33 T 11-10-2018 IPR013988 PhnA protein, C-terminal AYJ52_01520 a36eb5e5167221d58578395749ff4d3e 114 Gene3D G3DSA:2.20.25.10 1 41 7.0E-20 T 11-10-2018 AYJ52_01520 a36eb5e5167221d58578395749ff4d3e 114 Pfam PF08274 PhnA Zinc-Ribbon 2 30 6.0E-17 T 11-10-2018 IPR013987 PhnA protein, N-terminal AYJ52_01520 a36eb5e5167221d58578395749ff4d3e 114 SUPERFAMILY SSF82057 39 114 1.37E-27 T 11-10-2018 AYJ52_00260 2843a1ed47e34ab09bf86bafed788145 201 SUPERFAMILY SSF55469 1 196 3.93E-50 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_00260 2843a1ed47e34ab09bf86bafed788145 201 Gene3D G3DSA:3.40.109.10 1 197 2.4E-47 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_00260 2843a1ed47e34ab09bf86bafed788145 201 Pfam PF00881 Nitroreductase family 7 178 6.9E-30 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AYJ52_11080 f8c14203309b36d837989ec1ccb33b47 321 SMART SM00342 235 317 3.6E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_11080 f8c14203309b36d837989ec1ccb33b47 321 Gene3D G3DSA:1.10.10.60 212 321 5.8E-18 T 11-10-2018 AYJ52_11080 f8c14203309b36d837989ec1ccb33b47 321 SUPERFAMILY SSF46689 271 317 1.84E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11080 f8c14203309b36d837989ec1ccb33b47 321 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 9 191 5.5E-38 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_11080 f8c14203309b36d837989ec1ccb33b47 321 Pfam PF12833 Helix-turn-helix domain 241 317 1.6E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_16760 0bb5ac967066eb1e7b051099d2ec098f 259 Gene3D G3DSA:3.10.620.30 70 249 2.6E-45 T 11-10-2018 AYJ52_16760 0bb5ac967066eb1e7b051099d2ec098f 259 Pfam PF01841 Transglutaminase-like superfamily 121 212 8.2E-21 T 11-10-2018 IPR002931 Transglutaminase-like AYJ52_16760 0bb5ac967066eb1e7b051099d2ec098f 259 SUPERFAMILY SSF54001 101 240 1.18E-40 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AYJ52_16760 0bb5ac967066eb1e7b051099d2ec098f 259 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 3.0E-13 T 11-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal AYJ52_16760 0bb5ac967066eb1e7b051099d2ec098f 259 SMART SM00460 153 215 2.1E-16 T 11-10-2018 IPR002931 Transglutaminase-like AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 9.3E-49 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 9.3E-49 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 9.3E-49 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 9.3E-49 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 155 181 9.3E-49 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 9.3E-49 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 95 118 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 SUPERFAMILY SSF50022 14 171 1.09E-44 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 Pfam PF00355 Rieske [2Fe-2S] domain 52 136 1.7E-22 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 TIGRFAM TIGR03229 benzo_1_2_benA: benzoate 1,2-dioxygenase, large subunit 15 447 9.2E-274 T 11-10-2018 IPR017639 Benzoate 1,2-dioxygenase, large subunit AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 Gene3D G3DSA:3.90.380.10 30 443 6.1E-113 T 11-10-2018 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 Gene3D G3DSA:2.102.10.10 52 179 6.1E-113 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 203 391 2.9E-19 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 AYJ52_11355 f418d7b66374c04b5c9a6fb9cedd9cd2 460 SUPERFAMILY SSF55961 171 454 4.32E-69 T 11-10-2018 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 Pfam PF01842 ACT domain 10 70 4.9E-8 T 11-10-2018 IPR002912 ACT domain AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 6 287 43.744 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 SUPERFAMILY SSF55021 8 91 1.37E-14 T 11-10-2018 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 Gene3D G3DSA:3.40.50.170 94 287 5.0E-68 T 11-10-2018 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 Pfam PF00551 Formyl transferase 94 269 1.4E-35 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 PIRSF PIRSF036480 6 287 1.1E-111 T 11-10-2018 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 10 287 3.6E-117 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 117 144 2.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 95 117 2.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 2.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 11 37 2.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 44 56 2.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 2.8E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 Gene3D G3DSA:3.30.70.260 7 92 3.7E-23 T 11-10-2018 AYJ52_07485 913538d61f4d316d0775e9d28bb3dcaf 287 SUPERFAMILY SSF53328 94 287 3.79E-56 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AYJ52_13075 0f8e3096a9808475ffe8ec1d1ee1f4d5 427 SUPERFAMILY SSF56935 73 427 2.75E-26 T 11-10-2018 AYJ52_13075 0f8e3096a9808475ffe8ec1d1ee1f4d5 427 Pfam PF02530 Porin subfamily 78 407 1.2E-4 T 11-10-2018 IPR003684 Porin, alpha proteobacteria type GO:0015288|GO:0016020|GO:0055085 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 300 8.9E-116 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 79.244 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 Gene3D G3DSA:3.40.50.1370 4 133 1.1E-111 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 1.9E-30 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 1.9E-30 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 1.9E-30 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 1.9E-30 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 1.9E-30 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 SUPERFAMILY SSF53671 2 300 1.02E-102 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 143 3.0E-49 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 Gene3D G3DSA:3.40.50.1370 134 294 1.1E-111 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.1E-22 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 1.1E-22 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 1.1E-22 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 1.1E-22 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AYJ52_15725 efca12d0d04b10b24063484568677a68 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 296 7.2E-51 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AYJ52_10365 bcf9b7d5aed2bd8fe4a8e3160c9b1e5e 819 Pfam PF02687 FtsX-like permease family 721 806 7.4E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AYJ52_10365 bcf9b7d5aed2bd8fe4a8e3160c9b1e5e 819 PRINTS PR00173 Glutamate-aspartate symporter signature 401 426 5.0E-6 T 11-10-2018 AYJ52_10365 bcf9b7d5aed2bd8fe4a8e3160c9b1e5e 819 PRINTS PR00173 Glutamate-aspartate symporter signature 687 706 5.0E-6 T 11-10-2018 AYJ52_10365 bcf9b7d5aed2bd8fe4a8e3160c9b1e5e 819 PRINTS PR00173 Glutamate-aspartate symporter signature 304 324 5.0E-6 T 11-10-2018 AYJ52_17745 87de62c548908f5aa26cd301b66adbae 910 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 181 1.3E-25 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_17745 87de62c548908f5aa26cd301b66adbae 910 Gene3D G3DSA:2.170.130.10 45 185 4.9E-37 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_17745 87de62c548908f5aa26cd301b66adbae 910 SUPERFAMILY SSF56935 52 910 3.36E-92 T 11-10-2018 AYJ52_17745 87de62c548908f5aa26cd301b66adbae 910 Pfam PF00593 TonB dependent receptor 407 909 1.8E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_12250 e980d4781946c72dad863950ecff327a 198 SUPERFAMILY SSF52218 1 196 2.64E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_12250 e980d4781946c72dad863950ecff327a 198 Pfam PF02525 Flavodoxin-like fold 3 195 5.9E-39 T 11-10-2018 IPR003680 Flavodoxin-like fold AYJ52_12250 e980d4781946c72dad863950ecff327a 198 Gene3D G3DSA:3.40.50.360 2 197 9.5E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_12250 e980d4781946c72dad863950ecff327a 198 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 197 26.599 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AYJ52_10975 0657ade3ce317490db6d9614745cf0bc 178 Pfam PF11578 Protein of unknown function (DUF3237) 29 176 1.8E-44 T 11-10-2018 IPR020915 Uncharacterised protein family UPF0311 AYJ52_10975 0657ade3ce317490db6d9614745cf0bc 178 Hamap MF_00775 UPF0311 protein . 28 178 26.79 T 11-10-2018 IPR020915 Uncharacterised protein family UPF0311 AYJ52_10975 0657ade3ce317490db6d9614745cf0bc 178 Gene3D G3DSA:2.40.160.20 19 178 5.9E-70 T 11-10-2018 AYJ52_14800 258f9106d5d7aa36a8edd991a14973bf 115 Pfam PF13103 TonB C terminal 34 77 2.4E-5 T 11-10-2018 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 SUPERFAMILY SSF118215 8 412 5.23E-124 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 1.8E-118 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 Gene3D G3DSA:1.10.3860.10 1 427 2.6E-137 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 43.552 T 11-10-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 8.0E-50 T 11-10-2018 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 8.0E-50 T 11-10-2018 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 8.0E-50 T 11-10-2018 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 8.0E-50 T 11-10-2018 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 8.0E-50 T 11-10-2018 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 8.0E-50 T 11-10-2018 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.0E-50 T 11-10-2018 AYJ52_07375 8b1341401bc1aa7860d59bf35f04a44b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.0E-50 T 11-10-2018 AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 SUPERFAMILY SSF49584 157 242 3.92E-20 T 11-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 SUPERFAMILY SSF49354 22 154 1.41E-38 T 11-10-2018 IPR008962 PapD-like superfamily AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 Gene3D G3DSA:2.60.40.10 157 239 3.3E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 Gene3D G3DSA:2.60.40.10 28 155 4.1E-39 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 237 5.6E-14 T 11-10-2018 IPR016148 Pili assembly chaperone, C-terminal AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 PRINTS PR00969 Pili chaperone signature 171 186 3.4E-31 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 PRINTS PR00969 Pili chaperone signature 136 151 3.4E-31 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 PRINTS PR00969 Pili chaperone signature 27 36 3.4E-31 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 PRINTS PR00969 Pili chaperone signature 76 97 3.4E-31 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 PRINTS PR00969 Pili chaperone signature 106 123 3.4E-31 T 11-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AYJ52_14405 27a3b04879649ce20a0260f223f90ae9 244 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 154 5.1E-42 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AYJ52_06925 d08f9419cb4a86a9b7970fd6377380b8 175 Pfam PF01899 Na+/H+ ion antiporter subunit 18 164 4.2E-38 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AYJ52_06925 d08f9419cb4a86a9b7970fd6377380b8 175 PIRSF PIRSF019239 7 170 1.1E-50 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AYJ52_17625 697b72a29ef5873edd90fc81c537074f 127 Gene3D G3DSA:1.20.1290.10 3 126 2.4E-37 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AYJ52_17625 697b72a29ef5873edd90fc81c537074f 127 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 7.4E-23 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AYJ52_17625 697b72a29ef5873edd90fc81c537074f 127 SUPERFAMILY SSF69118 4 123 1.31E-34 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AYJ52_01345 6be96839b29398b19dc7f0fc3484857a 324 Pfam PF01734 Patatin-like phospholipase 58 215 1.3E-27 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AYJ52_01345 6be96839b29398b19dc7f0fc3484857a 324 Gene3D G3DSA:3.40.1090.10 41 154 1.5E-29 T 11-10-2018 AYJ52_01345 6be96839b29398b19dc7f0fc3484857a 324 SUPERFAMILY SSF52151 53 246 4.53E-53 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AYJ52_09755 116c1b219a9058f50c72cc43891a4ecd 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 201 1.4E-57 T 11-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 AYJ52_09755 116c1b219a9058f50c72cc43891a4ecd 206 PIRSF PIRSF006324 1 206 1.4E-40 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_09755 116c1b219a9058f50c72cc43891a4ecd 206 Pfam PF01810 LysE type translocator 15 203 2.8E-49 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_07150 23b96aaf478036f2ff7448b13746f147 136 Gene3D G3DSA:2.170.150.70 8 122 9.3E-18 T 11-10-2018 AYJ52_07150 23b96aaf478036f2ff7448b13746f147 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 117 8.7E-23 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AYJ52_07150 23b96aaf478036f2ff7448b13746f147 136 SUPERFAMILY SSF51316 4 136 3.56E-43 T 11-10-2018 IPR011057 Mss4-like superfamily AYJ52_16655 446270b3ab8f936a265f2045c3f2083b 334 SUPERFAMILY SSF51679 8 328 2.49E-88 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AYJ52_16655 446270b3ab8f936a265f2045c3f2083b 334 Pfam PF00296 Luciferase-like monooxygenase 22 297 7.1E-41 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AYJ52_16655 446270b3ab8f936a265f2045c3f2083b 334 Gene3D G3DSA:3.20.20.30 4 332 3.8E-97 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AYJ52_16655 446270b3ab8f936a265f2045c3f2083b 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 1.1E-130 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 AYJ52_02865 01460fa0e4dc9d5ed9e386cddaddb8c9 366 SUPERFAMILY SSF54631 227 359 7.08E-28 T 11-10-2018 AYJ52_02865 01460fa0e4dc9d5ed9e386cddaddb8c9 366 Pfam PF04982 HPP family 54 173 2.5E-39 T 11-10-2018 IPR007065 HPP AYJ52_02865 01460fa0e4dc9d5ed9e386cddaddb8c9 366 Pfam PF00571 CBS domain 305 358 7.0E-12 T 11-10-2018 IPR000644 CBS domain AYJ52_02865 01460fa0e4dc9d5ed9e386cddaddb8c9 366 Pfam PF00571 CBS domain 239 290 5.8E-8 T 11-10-2018 IPR000644 CBS domain AYJ52_02865 01460fa0e4dc9d5ed9e386cddaddb8c9 366 SUPERFAMILY SSF103473 52 179 3.79E-5 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_02865 01460fa0e4dc9d5ed9e386cddaddb8c9 366 SMART SM00116 312 359 4.0E-8 T 11-10-2018 IPR000644 CBS domain AYJ52_02865 01460fa0e4dc9d5ed9e386cddaddb8c9 366 SMART SM00116 244 292 0.1 T 11-10-2018 IPR000644 CBS domain AYJ52_02865 01460fa0e4dc9d5ed9e386cddaddb8c9 366 Gene3D G3DSA:3.10.580.10 301 366 6.8E-13 T 11-10-2018 AYJ52_02865 01460fa0e4dc9d5ed9e386cddaddb8c9 366 Gene3D G3DSA:3.10.580.10 210 296 1.8E-10 T 11-10-2018 AYJ52_09850 75869f7fc83a44ab8d7dc1affb4a33b7 372 Pfam PF00437 Type II/IV secretion system protein 30 269 7.0E-35 T 11-10-2018 IPR001482 Type II/IV secretion system protein AYJ52_09850 75869f7fc83a44ab8d7dc1affb4a33b7 372 SUPERFAMILY SSF52540 4 338 9.12E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09850 75869f7fc83a44ab8d7dc1affb4a33b7 372 Gene3D G3DSA:3.30.450.90 1 100 5.6E-25 T 11-10-2018 AYJ52_09850 75869f7fc83a44ab8d7dc1affb4a33b7 372 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 345 2.0E-128 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AYJ52_09850 75869f7fc83a44ab8d7dc1affb4a33b7 372 Gene3D G3DSA:3.40.50.300 102 355 8.5E-85 T 11-10-2018 AYJ52_19355 ae3e4110ada0458ba422fe5bb660f5d5 298 Pfam PF00589 Phage integrase family 125 279 1.0E-40 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AYJ52_19355 ae3e4110ada0458ba422fe5bb660f5d5 298 Gene3D G3DSA:1.10.443.10 107 288 7.1E-53 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AYJ52_19355 ae3e4110ada0458ba422fe5bb660f5d5 298 SUPERFAMILY SSF56349 2 287 2.3E-51 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AYJ52_19355 ae3e4110ada0458ba422fe5bb660f5d5 298 Gene3D G3DSA:1.10.150.130 1 89 2.4E-15 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AYJ52_19355 ae3e4110ada0458ba422fe5bb660f5d5 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 3 80 4.7E-10 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AYJ52_02695 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-16 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02695 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-16 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02695 30754b50b4a1c114facd78fddb6cd26e 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-16 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02695 30754b50b4a1c114facd78fddb6cd26e 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.255 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02695 30754b50b4a1c114facd78fddb6cd26e 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 6.9E-36 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AYJ52_02695 30754b50b4a1c114facd78fddb6cd26e 103 SMART SM01403 7 101 4.5E-55 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AYJ52_02695 30754b50b4a1c114facd78fddb6cd26e 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.9E-45 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02695 30754b50b4a1c114facd78fddb6cd26e 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02695 30754b50b4a1c114facd78fddb6cd26e 103 SUPERFAMILY SSF54999 5 101 1.31E-36 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AYJ52_02695 30754b50b4a1c114facd78fddb6cd26e 103 Gene3D G3DSA:3.30.70.600 1 103 7.2E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 3.4E-12 T 11-10-2018 AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 499 517 3.4E-12 T 11-10-2018 AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 478 3.4E-12 T 11-10-2018 AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 Gene3D G3DSA:3.40.50.720 376 669 1.6E-108 T 11-10-2018 AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 Gene3D G3DSA:3.20.20.70 3 369 4.7E-123 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 SUPERFAMILY SSF51395 2 368 9.87E-109 T 11-10-2018 AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 331 2.0E-78 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 638 3.7E-25 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 SUPERFAMILY SSF51905 471 630 2.42E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 Gene3D G3DSA:3.50.50.60 472 628 1.6E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_10770 5fb8f862983c1b2474c01e808752f966 676 SUPERFAMILY SSF51971 334 519 8.0E-41 T 11-10-2018 AYJ52_17180 1756a34721f957c1de807fd20b5d7a0d 321 Gene3D G3DSA:3.40.50.720 96 285 7.8E-104 T 11-10-2018 AYJ52_17180 1756a34721f957c1de807fd20b5d7a0d 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 317 4.7E-26 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AYJ52_17180 1756a34721f957c1de807fd20b5d7a0d 321 SUPERFAMILY SSF51735 99 286 2.82E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_17180 1756a34721f957c1de807fd20b5d7a0d 321 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 175 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AYJ52_17180 1756a34721f957c1de807fd20b5d7a0d 321 SUPERFAMILY SSF52283 1 132 1.02E-26 T 11-10-2018 AYJ52_17180 1756a34721f957c1de807fd20b5d7a0d 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 285 3.2E-56 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AYJ52_17180 1756a34721f957c1de807fd20b5d7a0d 321 Gene3D G3DSA:3.40.50.720 3 312 7.8E-104 T 11-10-2018 AYJ52_05895 854771c69d647dc82bb80ac356f15d52 302 Pfam PF00892 EamA-like transporter family 155 285 3.9E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_05895 854771c69d647dc82bb80ac356f15d52 302 Pfam PF00892 EamA-like transporter family 6 140 4.9E-25 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_05895 854771c69d647dc82bb80ac356f15d52 302 SUPERFAMILY SSF103481 40 143 1.11E-13 T 11-10-2018 AYJ52_05895 854771c69d647dc82bb80ac356f15d52 302 SUPERFAMILY SSF103481 193 286 6.02E-11 T 11-10-2018 AYJ52_12195 e05dcf6e89ce1cb18adfaa0ec09cc18d 263 SUPERFAMILY SSF52096 1 263 1.27E-84 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_12195 e05dcf6e89ce1cb18adfaa0ec09cc18d 263 Gene3D G3DSA:1.10.12.10 206 263 7.2E-24 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AYJ52_12195 e05dcf6e89ce1cb18adfaa0ec09cc18d 263 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 7 263 3.0E-118 T 11-10-2018 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 AYJ52_12195 e05dcf6e89ce1cb18adfaa0ec09cc18d 263 Gene3D G3DSA:3.90.226.10 1 205 3.9E-74 T 11-10-2018 AYJ52_12195 e05dcf6e89ce1cb18adfaa0ec09cc18d 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 262 3.9E-65 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_03080 63831f76f14a24d11d44039a25797291 301 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 13 299 19.12 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_03080 63831f76f14a24d11d44039a25797291 301 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 184 245 5.9E-12 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AYJ52_03080 63831f76f14a24d11d44039a25797291 301 SUPERFAMILY SSF55120 12 243 3.17E-81 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_03080 63831f76f14a24d11d44039a25797291 301 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 14 221 4.0E-78 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_03080 63831f76f14a24d11d44039a25797291 301 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 35 183 3.1E-61 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AYJ52_03080 63831f76f14a24d11d44039a25797291 301 Gene3D G3DSA:3.30.2350.10 3 247 1.6E-92 T 11-10-2018 AYJ52_03080 63831f76f14a24d11d44039a25797291 301 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 247 298 3.0E-6 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_01340 4c12736eaa64f516b3eeff05daffba43 411 Gene3D G3DSA:3.40.50.1100 59 155 1.7E-112 T 11-10-2018 AYJ52_01340 4c12736eaa64f516b3eeff05daffba43 411 SUPERFAMILY SSF53686 11 360 1.57E-92 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_01340 4c12736eaa64f516b3eeff05daffba43 411 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 310 2.4E-76 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_01340 4c12736eaa64f516b3eeff05daffba43 411 Gene3D G3DSA:3.30.70.260 331 410 3.9E-6 T 11-10-2018 AYJ52_01340 4c12736eaa64f516b3eeff05daffba43 411 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 30 407 1.4E-133 T 11-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AYJ52_01340 4c12736eaa64f516b3eeff05daffba43 411 Gene3D G3DSA:3.40.50.1100 16 316 1.7E-112 T 11-10-2018 AYJ52_09045 bd9441162101012f78c3b90c5d382e2a 747 Gene3D G3DSA:2.60.40.10 2 66 2.6E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_09045 bd9441162101012f78c3b90c5d382e2a 747 Gene3D G3DSA:2.150.10.10 623 742 2.6E-7 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AYJ52_09045 bd9441162101012f78c3b90c5d382e2a 747 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 279 336 0.0016 T 11-10-2018 IPR010221 VCBS repeat AYJ52_09045 bd9441162101012f78c3b90c5d382e2a 747 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 667 745 3.8E-16 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AYJ52_02420 e467cf7e511ccb53c299d8413059e562 362 SUPERFAMILY SSF52540 119 295 7.47E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02420 e467cf7e511ccb53c299d8413059e562 362 Pfam PF02562 PhoH-like protein 120 323 1.5E-95 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 AYJ52_02420 e467cf7e511ccb53c299d8413059e562 362 Gene3D G3DSA:3.40.50.300 117 323 2.0E-75 T 11-10-2018 AYJ52_02420 e467cf7e511ccb53c299d8413059e562 362 SUPERFAMILY SSF54791 12 77 4.97E-6 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AYJ52_11415 023bc43e4193f6d39417cf558f5d6488 133 Gene3D G3DSA:1.10.1660.10 1 125 1.3E-33 T 11-10-2018 AYJ52_11415 023bc43e4193f6d39417cf558f5d6488 133 SUPERFAMILY SSF46955 1 125 2.16E-35 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AYJ52_11415 023bc43e4193f6d39417cf558f5d6488 133 Pfam PF09278 MerR, DNA binding 45 106 6.4E-15 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AYJ52_11415 023bc43e4193f6d39417cf558f5d6488 133 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11415 023bc43e4193f6d39417cf558f5d6488 133 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.2E-48 T 11-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AYJ52_11415 023bc43e4193f6d39417cf558f5d6488 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.7E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11415 023bc43e4193f6d39417cf558f5d6488 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.7E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11415 023bc43e4193f6d39417cf558f5d6488 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.7E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11415 023bc43e4193f6d39417cf558f5d6488 133 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_11415 023bc43e4193f6d39417cf558f5d6488 133 SMART SM00422 1 70 4.1E-29 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AYJ52_00560 8766ccbfc577f7cad6c50effe95db21a 222 Gene3D G3DSA:3.40.50.150 51 199 6.3E-21 T 11-10-2018 AYJ52_00560 8766ccbfc577f7cad6c50effe95db21a 222 SUPERFAMILY SSF53335 62 220 1.08E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_00560 8766ccbfc577f7cad6c50effe95db21a 222 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 87 155 3.5E-15 T 11-10-2018 AYJ52_01000 2d958d97fb4ccfc9bcf86d777bfeb6ea 232 SUPERFAMILY SSF48317 15 225 1.47E-12 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AYJ52_01000 2d958d97fb4ccfc9bcf86d777bfeb6ea 232 Gene3D G3DSA:1.20.144.10 129 231 2.9E-7 T 11-10-2018 AYJ52_01000 2d958d97fb4ccfc9bcf86d777bfeb6ea 232 Pfam PF01569 PAP2 superfamily 99 214 6.0E-8 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AYJ52_05355 0be44edd9ebfc21b01a1de92a6e2f4ff 291 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 267 4.2E-103 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AYJ52_05355 0be44edd9ebfc21b01a1de92a6e2f4ff 291 Pfam PF00483 Nucleotidyl transferase 5 266 3.5E-23 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AYJ52_05355 0be44edd9ebfc21b01a1de92a6e2f4ff 291 Gene3D G3DSA:3.90.550.10 1 290 2.1E-79 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_05355 0be44edd9ebfc21b01a1de92a6e2f4ff 291 SUPERFAMILY SSF53448 3 279 5.18E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_19030 1a739f8be3166a649eb6e3d11db23cfe 408 Gene3D G3DSA:3.40.50.300 151 406 1.4E-55 T 11-10-2018 AYJ52_19030 1a739f8be3166a649eb6e3d11db23cfe 408 Pfam PF00437 Type II/IV secretion system protein 168 327 5.2E-29 T 11-10-2018 IPR001482 Type II/IV secretion system protein AYJ52_19030 1a739f8be3166a649eb6e3d11db23cfe 408 SUPERFAMILY SSF52540 121 345 3.53E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_10610 88e04ab20f430aed926a5564dfcf4a8c 209 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 9 166 2.6E-9 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AYJ52_10610 88e04ab20f430aed926a5564dfcf4a8c 209 Gene3D G3DSA:1.20.120.740 2 174 2.6E-40 T 11-10-2018 AYJ52_10610 88e04ab20f430aed926a5564dfcf4a8c 209 SUPERFAMILY SSF101327 7 167 9.02E-36 T 11-10-2018 IPR036255 YgfB-like superfamily AYJ52_10610 88e04ab20f430aed926a5564dfcf4a8c 209 Pfam PF03695 Uncharacterised protein family (UPF0149) 22 164 8.1E-22 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AYJ52_07240 facf9c687afbc34f6bcb74ac19651b88 231 Pfam PF08279 HTH domain 6 60 5.5E-17 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 AYJ52_07240 facf9c687afbc34f6bcb74ac19651b88 231 SUPERFAMILY SSF46785 2 61 2.02E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_07240 facf9c687afbc34f6bcb74ac19651b88 231 Pfam PF13280 WYL domain 136 226 8.6E-14 T 11-10-2018 IPR026881 WYL domain AYJ52_07240 facf9c687afbc34f6bcb74ac19651b88 231 Gene3D G3DSA:1.10.10.10 1 63 1.2E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10480 3ce5449f843894e948d69dcd37fcfd9a 291 Hamap MF_01384 Urease accessory protein UreD [ureD]. 16 275 26.784 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AYJ52_10480 3ce5449f843894e948d69dcd37fcfd9a 291 Pfam PF01774 UreD urease accessory protein 59 263 6.0E-46 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AYJ52_13100 ff08de25b959a490d620e1b9ff6eb822 287 Gene3D G3DSA:1.20.910.10 30 279 6.8E-30 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_13100 ff08de25b959a490d620e1b9ff6eb822 287 SMART SM01236 111 223 6.2E-12 T 11-10-2018 AYJ52_13100 ff08de25b959a490d620e1b9ff6eb822 287 SUPERFAMILY SSF48613 34 272 7.78E-11 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_01035 b221cc9a7768120e52f02e9271850b6f 208 SMART SM00563 46 158 2.6E-17 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AYJ52_01035 b221cc9a7768120e52f02e9271850b6f 208 SUPERFAMILY SSF69593 21 159 1.96E-18 T 11-10-2018 AYJ52_01035 b221cc9a7768120e52f02e9271850b6f 208 Pfam PF01553 Acyltransferase 45 151 3.8E-9 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AYJ52_16005 ea1fc05662ad3045dfe222ed42a6c1cf 342 Pfam PF12146 Serine aminopeptidase, S33 83 318 2.2E-32 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AYJ52_16005 ea1fc05662ad3045dfe222ed42a6c1cf 342 SUPERFAMILY SSF53474 64 321 3.49E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_16005 ea1fc05662ad3045dfe222ed42a6c1cf 342 Gene3D G3DSA:3.40.50.1820 70 337 7.7E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_19690 309199336914b47fdae5dda1e939a5cb 148 Pfam PF03811 InsA N-terminal domain 4 36 2.1E-6 T 11-10-2018 IPR003220 InsA N-terminal domain GO:0006313 AYJ52_05400 ce3b8019db4d65600125a1ce16f8dcf9 404 Gene3D G3DSA:3.40.640.10 60 301 3.1E-153 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_05400 ce3b8019db4d65600125a1ce16f8dcf9 404 Pfam PF00155 Aminotransferase class I and II 28 392 1.1E-82 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_05400 ce3b8019db4d65600125a1ce16f8dcf9 404 SUPERFAMILY SSF53383 1 397 5.02E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_05400 ce3b8019db4d65600125a1ce16f8dcf9 404 Gene3D G3DSA:3.90.1150.10 11 392 3.1E-153 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_05400 ce3b8019db4d65600125a1ce16f8dcf9 404 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AYJ52_05400 ce3b8019db4d65600125a1ce16f8dcf9 404 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.3E-35 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AYJ52_05400 ce3b8019db4d65600125a1ce16f8dcf9 404 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.3E-35 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AYJ52_05400 ce3b8019db4d65600125a1ce16f8dcf9 404 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.3E-35 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AYJ52_05400 ce3b8019db4d65600125a1ce16f8dcf9 404 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.3E-35 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AYJ52_18010 43a9a7bb1ef8fadb75b81977f85e3940 440 SUPERFAMILY SSF118215 5 393 9.94E-98 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_18010 43a9a7bb1ef8fadb75b81977f85e3940 440 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 2.0E-20 T 11-10-2018 AYJ52_18010 43a9a7bb1ef8fadb75b81977f85e3940 440 PRINTS PR00173 Glutamate-aspartate symporter signature 283 309 2.0E-20 T 11-10-2018 AYJ52_18010 43a9a7bb1ef8fadb75b81977f85e3940 440 PRINTS PR00173 Glutamate-aspartate symporter signature 183 202 2.0E-20 T 11-10-2018 AYJ52_18010 43a9a7bb1ef8fadb75b81977f85e3940 440 PRINTS PR00173 Glutamate-aspartate symporter signature 70 95 2.0E-20 T 11-10-2018 AYJ52_18010 43a9a7bb1ef8fadb75b81977f85e3940 440 Pfam PF00375 Sodium:dicarboxylate symporter family 5 392 3.3E-91 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AYJ52_18010 43a9a7bb1ef8fadb75b81977f85e3940 440 Gene3D G3DSA:1.10.3860.10 1 410 6.6E-102 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_10515 f66cf7f69014f7b66698558103c5fbd9 189 Pfam PF04955 HupE / UreJ protein 11 185 2.2E-28 T 11-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein AYJ52_10515 f66cf7f69014f7b66698558103c5fbd9 189 PIRSF PIRSF016919 3 189 1.1E-27 T 11-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein AYJ52_07295 c91c0f2bea0ec6458b6e9e0ec55ff28d 287 Pfam PF03466 LysR substrate binding domain 88 286 4.3E-43 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_07295 c91c0f2bea0ec6458b6e9e0ec55ff28d 287 Gene3D G3DSA:3.40.190.290 92 287 2.7E-42 T 11-10-2018 AYJ52_07295 c91c0f2bea0ec6458b6e9e0ec55ff28d 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 4.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_07295 c91c0f2bea0ec6458b6e9e0ec55ff28d 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_07295 c91c0f2bea0ec6458b6e9e0ec55ff28d 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_07295 c91c0f2bea0ec6458b6e9e0ec55ff28d 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_07295 c91c0f2bea0ec6458b6e9e0ec55ff28d 287 Gene3D G3DSA:1.10.10.10 1 91 4.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_07295 c91c0f2bea0ec6458b6e9e0ec55ff28d 287 SUPERFAMILY SSF53850 88 286 1.85E-42 T 11-10-2018 AYJ52_07295 c91c0f2bea0ec6458b6e9e0ec55ff28d 287 SUPERFAMILY SSF46785 1 110 1.14E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_07655 27c79c6952f74329ccc198a25c383c4e 209 SUPERFAMILY SSF51569 3 205 2.2E-64 T 11-10-2018 AYJ52_07655 27c79c6952f74329ccc198a25c383c4e 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AYJ52_07655 27c79c6952f74329ccc198a25c383c4e 209 Gene3D G3DSA:3.20.20.70 2 207 2.2E-70 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_07655 27c79c6952f74329ccc198a25c383c4e 209 Pfam PF01081 KDPG and KHG aldolase 4 199 3.6E-67 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AYJ52_07655 27c79c6952f74329ccc198a25c383c4e 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 204 1.8E-73 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AYJ52_07655 27c79c6952f74329ccc198a25c383c4e 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AYJ52_11255 f6b86072b7e7198772fb534f44b59ed4 259 SUPERFAMILY SSF51735 2 157 6.81E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_11255 f6b86072b7e7198772fb534f44b59ed4 259 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 89 1.7E-11 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AYJ52_11255 f6b86072b7e7198772fb534f44b59ed4 259 Gene3D G3DSA:1.10.1040.20 156 256 8.8E-34 T 11-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily AYJ52_11255 f6b86072b7e7198772fb534f44b59ed4 259 SUPERFAMILY SSF48179 159 257 3.4E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_11255 f6b86072b7e7198772fb534f44b59ed4 259 Pfam PF10728 Domain of unknown function (DUF2520) 126 250 1.1E-29 T 11-10-2018 IPR018931 Domain of unknown function DUF2520 AYJ52_11255 f6b86072b7e7198772fb534f44b59ed4 259 Gene3D G3DSA:3.40.50.720 1 155 4.1E-44 T 11-10-2018 AYJ52_15400 019c10a613156030ae41d0b05f6b0858 107 Pfam PF00355 Rieske [2Fe-2S] domain 4 87 2.4E-14 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AYJ52_15400 019c10a613156030ae41d0b05f6b0858 107 SUPERFAMILY SSF50022 3 105 7.2E-23 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_15400 019c10a613156030ae41d0b05f6b0858 107 Gene3D G3DSA:2.102.10.10 1 107 4.7E-18 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_04455 a5c07f154ecf5f9ec2c9210545ce8861 305 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 304 7.7E-105 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AYJ52_04455 a5c07f154ecf5f9ec2c9210545ce8861 305 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 304 28.995 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AYJ52_04455 a5c07f154ecf5f9ec2c9210545ce8861 305 Pfam PF02769 AIR synthase related protein, C-terminal domain 185 285 1.4E-6 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AYJ52_04455 a5c07f154ecf5f9ec2c9210545ce8861 305 PIRSF PIRSF005303 1 304 1.1E-93 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AYJ52_04455 a5c07f154ecf5f9ec2c9210545ce8861 305 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 135 4.0E-28 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AYJ52_04455 a5c07f154ecf5f9ec2c9210545ce8861 305 SUPERFAMILY SSF55326 2 136 2.09E-38 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AYJ52_04455 a5c07f154ecf5f9ec2c9210545ce8861 305 SUPERFAMILY SSF56042 140 286 1.11E-33 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AYJ52_04455 a5c07f154ecf5f9ec2c9210545ce8861 305 Gene3D G3DSA:3.90.650.10 142 305 2.3E-48 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AYJ52_04455 a5c07f154ecf5f9ec2c9210545ce8861 305 Gene3D G3DSA:3.30.1330.10 1 141 3.7E-48 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AYJ52_09175 981c671652da48cdc212b616ed32d125 173 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 161 1.7E-32 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09175 981c671652da48cdc212b616ed32d125 173 Gene3D G3DSA:1.20.120.1200 1 163 1.6E-44 T 11-10-2018 AYJ52_04005 b012a97111c8d9d63970810a8154e3bc 180 Pfam PF00857 Isochorismatase family 4 175 6.5E-36 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AYJ52_04005 b012a97111c8d9d63970810a8154e3bc 180 SUPERFAMILY SSF52499 2 178 5.76E-47 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_04005 b012a97111c8d9d63970810a8154e3bc 180 Gene3D G3DSA:3.40.50.850 1 180 9.6E-48 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_00215 e45e9891acf476b28a3f3a5a37e62b3c 323 Pfam PF04280 Tim44-like domain 206 322 8.8E-11 T 11-10-2018 IPR007379 Tim44-like domain AYJ52_00215 e45e9891acf476b28a3f3a5a37e62b3c 323 SUPERFAMILY SSF54427 209 322 2.98E-7 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_00215 e45e9891acf476b28a3f3a5a37e62b3c 323 SMART SM00978 192 322 5.4E-27 T 11-10-2018 IPR007379 Tim44-like domain AYJ52_03185 1c1a79ec728b5d1af294d7ccc62d082d 542 Pfam PF15864 Protein glycosylation ligase 153 178 6.0E-11 T 11-10-2018 IPR031726 Protein glycosylation ligase domain AYJ52_03185 1c1a79ec728b5d1af294d7ccc62d082d 542 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 369 531 2.6E-11 T 11-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal AYJ52_03185 1c1a79ec728b5d1af294d7ccc62d082d 542 Pfam PF04932 O-Antigen ligase 192 343 3.4E-16 T 11-10-2018 IPR007016 O-antigen ligase-related AYJ52_04535 29445a11ded88066412641a49bd5994f 401 SUPERFAMILY SSF51338 1 398 6.48E-31 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_04535 29445a11ded88066412641a49bd5994f 401 TIGRFAM TIGR01224 hutI: imidazolonepropionase 21 397 2.1E-151 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04535 29445a11ded88066412641a49bd5994f 401 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 43.705 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04535 29445a11ded88066412641a49bd5994f 401 Gene3D G3DSA:3.20.20.140 61 359 2.2E-162 T 11-10-2018 AYJ52_04535 29445a11ded88066412641a49bd5994f 401 Pfam PF01979 Amidohydrolase family 57 397 1.1E-27 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AYJ52_04535 29445a11ded88066412641a49bd5994f 401 Gene3D G3DSA:2.30.40.10 7 396 2.2E-162 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_04535 29445a11ded88066412641a49bd5994f 401 SUPERFAMILY SSF51556 60 360 2.13E-87 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_01275 1a4973d11d6451a0b790cde9c3c1dc52 104 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 28 99 6.8E-17 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AYJ52_01275 1a4973d11d6451a0b790cde9c3c1dc52 104 Gene3D G3DSA:1.10.20.60 9 102 1.5E-21 T 11-10-2018 AYJ52_01275 1a4973d11d6451a0b790cde9c3c1dc52 104 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 13 104 7.8E-28 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AYJ52_01275 1a4973d11d6451a0b790cde9c3c1dc52 104 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 11 104 22.367 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AYJ52_01275 1a4973d11d6451a0b790cde9c3c1dc52 104 SUPERFAMILY SSF141000 12 102 3.4E-27 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 AYJ52_12880 760bb92047c0bc7d55e46c6d5e48598d 173 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 18 32 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AYJ52_12880 760bb92047c0bc7d55e46c6d5e48598d 173 Pfam PF02417 Chromate transporter 7 169 1.2E-32 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AYJ52_17855 188398da2f6de47b5c7634c54d5e0555 980 SUPERFAMILY SSF52777 643 864 4.67E-35 T 11-10-2018 AYJ52_17855 188398da2f6de47b5c7634c54d5e0555 980 SUPERFAMILY SSF52777 467 651 1.89E-13 T 11-10-2018 AYJ52_17855 188398da2f6de47b5c7634c54d5e0555 980 Pfam PF00668 Condensation domain 26 456 3.1E-34 T 11-10-2018 IPR001242 Condensation domain AYJ52_17855 188398da2f6de47b5c7634c54d5e0555 980 Pfam PF00668 Condensation domain 495 867 2.6E-22 T 11-10-2018 IPR001242 Condensation domain AYJ52_17855 188398da2f6de47b5c7634c54d5e0555 980 Gene3D G3DSA:3.30.559.10 23 200 2.9E-33 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AYJ52_17855 188398da2f6de47b5c7634c54d5e0555 980 Gene3D G3DSA:3.30.559.10 465 642 4.9E-29 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AYJ52_17855 188398da2f6de47b5c7634c54d5e0555 980 Gene3D G3DSA:3.30.559.30 207 462 2.7E-62 T 11-10-2018 AYJ52_17855 188398da2f6de47b5c7634c54d5e0555 980 Gene3D G3DSA:3.30.559.30 643 876 1.5E-35 T 11-10-2018 AYJ52_17855 188398da2f6de47b5c7634c54d5e0555 980 SUPERFAMILY SSF52777 209 453 7.0E-42 T 11-10-2018 AYJ52_17855 188398da2f6de47b5c7634c54d5e0555 980 SUPERFAMILY SSF52777 29 200 2.11E-16 T 11-10-2018 AYJ52_01980 bdadf7b73dd24db8061babd43eb410c3 295 Pfam PF06258 Mitochondrial fission ELM1 11 292 1.1E-56 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like AYJ52_01980 bdadf7b73dd24db8061babd43eb410c3 295 SUPERFAMILY SSF53756 2 239 5.65E-5 T 11-10-2018 AYJ52_09840 86e725a7cb826f728117f86df720d76b 132 Pfam PF04355 SmpA / OmlA family 30 106 1.6E-22 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AYJ52_09840 86e725a7cb826f728117f86df720d76b 132 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 117 31.3 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE AYJ52_09840 86e725a7cb826f728117f86df720d76b 132 Gene3D G3DSA:3.30.1450.10 29 117 2.7E-22 T 11-10-2018 IPR037873 BamE-like AYJ52_00580 98fd7f89a58d41c70ca6ee2a5aa54929 587 Gene3D G3DSA:2.60.40.380 38 139 9.2E-36 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 AYJ52_00580 98fd7f89a58d41c70ca6ee2a5aa54929 587 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 47 136 3.0E-33 T 11-10-2018 IPR032093 Phospholipase D, N-terminal AYJ52_00580 98fd7f89a58d41c70ca6ee2a5aa54929 587 SUPERFAMILY SSF56300 142 554 7.6E-34 T 11-10-2018 AYJ52_00580 98fd7f89a58d41c70ca6ee2a5aa54929 587 Pfam PF09423 PhoD-like phosphatase 146 550 4.2E-123 T 11-10-2018 IPR018946 Alkaline phosphatase D-related AYJ52_08650 82d61f9fed877aa2d700bad83fd32e09 274 Pfam PF00795 Carbon-nitrogen hydrolase 4 253 7.9E-49 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AYJ52_08650 82d61f9fed877aa2d700bad83fd32e09 274 SUPERFAMILY SSF56317 3 269 1.05E-68 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AYJ52_08650 82d61f9fed877aa2d700bad83fd32e09 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AYJ52_08650 82d61f9fed877aa2d700bad83fd32e09 274 Gene3D G3DSA:3.60.110.10 1 274 1.9E-83 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AYJ52_06125 3833ea10d8b15ce00ddcec921c263e21 258 Gene3D G3DSA:3.40.225.10 19 256 2.2E-54 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AYJ52_06125 3833ea10d8b15ce00ddcec921c263e21 258 SMART SM01007 32 210 1.3E-45 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AYJ52_06125 3833ea10d8b15ce00ddcec921c263e21 258 SUPERFAMILY SSF53639 25 237 3.53E-63 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AYJ52_06125 3833ea10d8b15ce00ddcec921c263e21 258 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 210 3.6E-39 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AYJ52_03690 998850aaae8d5d49e8115b49a17534e1 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 279 5.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_03690 998850aaae8d5d49e8115b49a17534e1 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 295 5.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_03690 998850aaae8d5d49e8115b49a17534e1 300 SMART SM00342 211 295 3.4E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_03690 998850aaae8d5d49e8115b49a17534e1 300 Gene3D G3DSA:1.10.10.60 203 298 5.3E-21 T 11-10-2018 AYJ52_03690 998850aaae8d5d49e8115b49a17534e1 300 SUPERFAMILY SSF46689 251 297 1.12E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_03690 998850aaae8d5d49e8115b49a17534e1 300 Pfam PF12833 Helix-turn-helix domain 222 296 4.5E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_09895 6add1dd29d2fd29eac6427a3c61e3736 371 Pfam PF01266 FAD dependent oxidoreductase 2 346 6.1E-61 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AYJ52_09895 6add1dd29d2fd29eac6427a3c61e3736 371 Gene3D G3DSA:3.50.50.60 3 348 1.7E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_09895 6add1dd29d2fd29eac6427a3c61e3736 371 SUPERFAMILY SSF54373 221 306 1.23E-20 T 11-10-2018 AYJ52_09895 6add1dd29d2fd29eac6427a3c61e3736 371 Gene3D G3DSA:3.30.9.10 88 307 1.7E-77 T 11-10-2018 AYJ52_09895 6add1dd29d2fd29eac6427a3c61e3736 371 SUPERFAMILY SSF51905 1 365 3.24E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_05685 433688fcd8de406f9f0c3bb888838b7b 253 SUPERFAMILY SSF56214 110 222 1.92E-18 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_05685 433688fcd8de406f9f0c3bb888838b7b 253 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 111 195 6.1E-14 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_05685 433688fcd8de406f9f0c3bb888838b7b 253 Gene3D G3DSA:3.90.470.20 25 227 9.6E-44 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_05685 433688fcd8de406f9f0c3bb888838b7b 253 Gene3D G3DSA:3.90.470.20 111 220 9.6E-44 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_05685 433688fcd8de406f9f0c3bb888838b7b 253 SUPERFAMILY SSF56214 8 102 5.76E-19 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_11390 405580d240a41beb15ceaa7e34091669 332 Pfam PF02332 Methane/Phenol/Toluene Hydroxylase 51 274 5.3E-60 T 11-10-2018 IPR003430 Methane/phenol/toluene hydroxylase GO:0006725|GO:0055114 AYJ52_11390 405580d240a41beb15ceaa7e34091669 332 Gene3D G3DSA:1.10.620.20 1 330 1.0E-111 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AYJ52_11390 405580d240a41beb15ceaa7e34091669 332 SUPERFAMILY SSF47240 1 326 1.62E-103 T 11-10-2018 IPR009078 Ferritin-like superfamily AYJ52_11390 405580d240a41beb15ceaa7e34091669 332 PIRSF PIRSF000040 1 330 2.4E-101 T 11-10-2018 IPR012078 Methane/phenol monooxygenase, hydroxylase component GO:0016709|GO:0055114 AYJ52_19350 d71594872744644d187a08185d36b23c 213 Pfam PF13673 Acetyltransferase (GNAT) domain 97 207 8.4E-6 T 11-10-2018 IPR000182 GNAT domain AYJ52_19350 d71594872744644d187a08185d36b23c 213 Gene3D G3DSA:3.40.630.30 55 208 3.1E-13 T 11-10-2018 AYJ52_19350 d71594872744644d187a08185d36b23c 213 SUPERFAMILY SSF55729 56 200 3.96E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_13595 0a2c78b332ce43da0f8e1e0000136842 904 SUPERFAMILY SSF56935 55 904 2.57E-105 T 11-10-2018 AYJ52_13595 0a2c78b332ce43da0f8e1e0000136842 904 Pfam PF00593 TonB dependent receptor 355 903 1.1E-52 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ52_13595 0a2c78b332ce43da0f8e1e0000136842 904 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 180 8.3E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AYJ52_13595 0a2c78b332ce43da0f8e1e0000136842 904 Gene3D G3DSA:2.170.130.10 48 185 4.8E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ52_06165 7125161b61407ae852474a65cc30d4fc 283 SUPERFAMILY SSF52540 55 280 2.46E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_06165 7125161b61407ae852474a65cc30d4fc 283 Gene3D G3DSA:3.40.50.300 36 208 2.4E-11 T 11-10-2018 AYJ52_06165 7125161b61407ae852474a65cc30d4fc 283 Pfam PF05621 Bacterial TniB protein 22 275 2.2E-92 T 11-10-2018 IPR008868 Bacterial TniB AYJ52_06030 255b6eaf369319b45eafff841151d5c6 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 463 2.9E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_06030 255b6eaf369319b45eafff841151d5c6 488 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 317 7.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_06030 255b6eaf369319b45eafff841151d5c6 488 Gene3D G3DSA:3.30.450.20 45 166 7.8E-9 T 11-10-2018 AYJ52_06030 255b6eaf369319b45eafff841151d5c6 488 SUPERFAMILY SSF55874 309 465 7.73E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_06030 255b6eaf369319b45eafff841151d5c6 488 SMART SM00388 254 319 4.9E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_06030 255b6eaf369319b45eafff841151d5c6 488 SUPERFAMILY SSF103190 36 178 6.28E-14 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AYJ52_06030 255b6eaf369319b45eafff841151d5c6 488 Gene3D G3DSA:3.30.565.10 325 476 5.5E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_06030 255b6eaf369319b45eafff841151d5c6 488 Gene3D G3DSA:1.10.287.130 205 315 6.1E-13 T 11-10-2018 AYJ52_06030 255b6eaf369319b45eafff841151d5c6 488 SMART SM00387 364 485 3.7E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_06030 255b6eaf369319b45eafff841151d5c6 488 SUPERFAMILY SSF47384 240 320 2.55E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_04920 7d65c1a20020e525331b75ca22e41542 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.1E-26 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_04920 7d65c1a20020e525331b75ca22e41542 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_04920 7d65c1a20020e525331b75ca22e41542 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_04920 7d65c1a20020e525331b75ca22e41542 44 Pfam PF00468 Ribosomal protein L34 1 44 1.8E-25 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_04920 7d65c1a20020e525331b75ca22e41542 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 2.0E-14 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_03825 1bada1693206e1e74797e194aafd3be6 140 Gene3D G3DSA:2.170.150.70 5 120 2.3E-15 T 11-10-2018 AYJ52_03825 1bada1693206e1e74797e194aafd3be6 140 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 116 6.7E-27 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AYJ52_03825 1bada1693206e1e74797e194aafd3be6 140 SUPERFAMILY SSF51316 1 136 3.45E-45 T 11-10-2018 IPR011057 Mss4-like superfamily AYJ52_03560 d84a058c1991ea612a9eb184343e7abf 252 Pfam PF00977 Histidine biosynthesis protein 5 235 3.4E-89 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AYJ52_03560 d84a058c1991ea612a9eb184343e7abf 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 4.0E-113 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AYJ52_03560 d84a058c1991ea612a9eb184343e7abf 252 SUPERFAMILY SSF51366 1 251 3.92E-86 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AYJ52_03560 d84a058c1991ea612a9eb184343e7abf 252 Gene3D G3DSA:3.20.20.70 1 252 5.1E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_03560 d84a058c1991ea612a9eb184343e7abf 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.711 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AYJ52_11570 9a8a9f99aef3f280817e3790f47256f1 415 Pfam PF00924 Mechanosensitive ion channel 143 395 1.8E-48 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AYJ52_11570 9a8a9f99aef3f280817e3790f47256f1 415 SUPERFAMILY SSF50182 186 252 4.25E-12 T 11-10-2018 IPR010920 LSM domain superfamily AYJ52_15485 7b119e8af2cf73421ce60381fbe092a7 113 Gene3D G3DSA:3.40.30.10 6 109 8.1E-31 T 11-10-2018 AYJ52_15485 7b119e8af2cf73421ce60381fbe092a7 113 SUPERFAMILY SSF52833 7 108 4.12E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_15485 7b119e8af2cf73421ce60381fbe092a7 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 105 5.4E-44 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related AYJ52_15485 7b119e8af2cf73421ce60381fbe092a7 113 Pfam PF00462 Glutaredoxin 21 85 4.5E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AYJ52_15485 7b119e8af2cf73421ce60381fbe092a7 113 PIRSF PIRSF005894 2 112 4.4E-47 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AYJ52_14770 88fbc957d698748b6d8ae63291680ee9 232 Pfam PF09339 IclR helix-turn-helix domain 15 64 1.5E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_14770 88fbc957d698748b6d8ae63291680ee9 232 Gene3D G3DSA:3.30.450.40 165 229 3.3E-11 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_14770 88fbc957d698748b6d8ae63291680ee9 232 SMART SM00346 13 102 3.1E-11 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AYJ52_14770 88fbc957d698748b6d8ae63291680ee9 232 Pfam PF01614 Bacterial transcriptional regulator 171 221 1.9E-6 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AYJ52_14770 88fbc957d698748b6d8ae63291680ee9 232 SUPERFAMILY SSF55781 83 227 2.55E-24 T 11-10-2018 AYJ52_14770 88fbc957d698748b6d8ae63291680ee9 232 SUPERFAMILY SSF46785 15 84 5.2E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14770 88fbc957d698748b6d8ae63291680ee9 232 Gene3D G3DSA:1.10.10.10 3 72 6.4E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14770 88fbc957d698748b6d8ae63291680ee9 232 Gene3D G3DSA:3.30.450.40 78 164 3.0E-12 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_02555 d6b802e431c994b87bc1cd27c1a1aff4 496 Pfam PF00743 Flavin-binding monooxygenase-like 79 347 1.0E-15 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AYJ52_02555 d6b802e431c994b87bc1cd27c1a1aff4 496 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 62 7.8E-8 T 11-10-2018 AYJ52_02555 d6b802e431c994b87bc1cd27c1a1aff4 496 Gene3D G3DSA:3.50.50.60 158 251 5.0E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_02555 d6b802e431c994b87bc1cd27c1a1aff4 496 Gene3D G3DSA:3.50.50.60 3 157 3.8E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_02555 d6b802e431c994b87bc1cd27c1a1aff4 496 SUPERFAMILY SSF51905 1 388 1.94E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_02555 d6b802e431c994b87bc1cd27c1a1aff4 496 Gene3D G3DSA:3.50.50.60 306 478 1.5E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14875 3ae126b5a77032cf2210949ed50953dd 607 SUPERFAMILY SSF56645 42 276 4.06E-41 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AYJ52_14875 3ae126b5a77032cf2210949ed50953dd 607 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 296 464 4.9E-19 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AYJ52_14875 3ae126b5a77032cf2210949ed50953dd 607 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 482 602 7.3E-24 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AYJ52_14875 3ae126b5a77032cf2210949ed50953dd 607 Gene3D G3DSA:1.10.540.10 44 159 4.9E-6 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AYJ52_14875 3ae126b5a77032cf2210949ed50953dd 607 Gene3D G3DSA:2.40.110.10 161 300 2.2E-23 T 11-10-2018 AYJ52_14875 3ae126b5a77032cf2210949ed50953dd 607 Gene3D G3DSA:1.20.140.10 301 468 9.3E-42 T 11-10-2018 AYJ52_14875 3ae126b5a77032cf2210949ed50953dd 607 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 274 3.4E-15 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AYJ52_14875 3ae126b5a77032cf2210949ed50953dd 607 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 55 157 2.7E-4 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AYJ52_14875 3ae126b5a77032cf2210949ed50953dd 607 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 6 32 1.5E-5 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AYJ52_14875 3ae126b5a77032cf2210949ed50953dd 607 SUPERFAMILY SSF47203 301 469 6.12E-39 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AYJ52_17475 e56987042d67830a1ebd469f980efd63 343 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.4E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_17475 e56987042d67830a1ebd469f980efd63 343 Gene3D G3DSA:3.40.190.10 91 293 3.8E-65 T 11-10-2018 AYJ52_17475 e56987042d67830a1ebd469f980efd63 343 SUPERFAMILY SSF46785 5 87 1.22E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_17475 e56987042d67830a1ebd469f980efd63 343 SUPERFAMILY SSF53850 89 298 2.02E-44 T 11-10-2018 AYJ52_17475 e56987042d67830a1ebd469f980efd63 343 Pfam PF03466 LysR substrate binding domain 88 295 4.1E-42 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_17475 e56987042d67830a1ebd469f980efd63 343 Gene3D G3DSA:1.10.10.10 4 90 3.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_17475 e56987042d67830a1ebd469f980efd63 343 Gene3D G3DSA:3.40.190.10 163 266 3.8E-65 T 11-10-2018 AYJ52_16895 d41273a92deb41cc9a8f1c487a39108c 218 Pfam PF01323 DSBA-like thioredoxin domain 8 208 1.5E-21 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AYJ52_16895 d41273a92deb41cc9a8f1c487a39108c 218 SUPERFAMILY SSF52833 7 210 8.21E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_16895 d41273a92deb41cc9a8f1c487a39108c 218 Gene3D G3DSA:3.40.30.10 4 211 6.7E-47 T 11-10-2018 AYJ52_19185 3d4167179bb68bd26bf5df4292f048cd 414 Pfam PF06114 IrrE N-terminal-like domain 283 350 7.0E-6 T 11-10-2018 IPR010359 IrrE N-terminal-like domain AYJ52_04010 4c7cb7064aa28f321963feefa1a51b48 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 643 51.918 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AYJ52_04010 4c7cb7064aa28f321963feefa1a51b48 649 Gene3D G3DSA:3.40.50.12780 48 513 6.3E-108 T 11-10-2018 AYJ52_04010 4c7cb7064aa28f321963feefa1a51b48 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_04010 4c7cb7064aa28f321963feefa1a51b48 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 1.2E-19 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AYJ52_04010 4c7cb7064aa28f321963feefa1a51b48 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 641 3.3E-302 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AYJ52_04010 4c7cb7064aa28f321963feefa1a51b48 649 SUPERFAMILY SSF56801 19 644 2.35E-185 T 11-10-2018 AYJ52_04010 4c7cb7064aa28f321963feefa1a51b48 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 6.0E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_04010 4c7cb7064aa28f321963feefa1a51b48 649 Gene3D G3DSA:3.30.300.30 516 645 3.5E-30 T 11-10-2018 AYJ52_04010 4c7cb7064aa28f321963feefa1a51b48 649 Pfam PF00501 AMP-binding enzyme 81 520 3.5E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_18495 2f74178330fa33ab485f1e275ab1dd82 402 Pfam PF07759 Protein of unknown function (DUF1615) 52 396 3.2E-118 T 11-10-2018 IPR011673 Protein of unknown function DUF1615 AYJ52_18495 2f74178330fa33ab485f1e275ab1dd82 402 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 21 396 2.0E-167 T 11-10-2018 IPR011673 Protein of unknown function DUF1615 AYJ52_13530 e89403217de12f8df9af31a71c14ff88 100 SMART SM00411 6 96 5.0E-37 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_13530 e89403217de12f8df9af31a71c14ff88 100 PRINTS PR01727 Prokaryotic integration host factor signature 46 61 1.3E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_13530 e89403217de12f8df9af31a71c14ff88 100 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 1.3E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_13530 e89403217de12f8df9af31a71c14ff88 100 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 1.3E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_13530 e89403217de12f8df9af31a71c14ff88 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 52 71 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AYJ52_13530 e89403217de12f8df9af31a71c14ff88 100 Gene3D G3DSA:4.10.520.10 6 99 1.3E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AYJ52_13530 e89403217de12f8df9af31a71c14ff88 100 SUPERFAMILY SSF47729 6 97 3.83E-28 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AYJ52_13530 e89403217de12f8df9af31a71c14ff88 100 Pfam PF00216 Bacterial DNA-binding protein 6 96 1.0E-27 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_13530 e89403217de12f8df9af31a71c14ff88 100 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 7 98 7.3E-40 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AYJ52_13130 81ddf57e595fefa29d2949c07dc597d7 471 PIRSF PIRSF002744 1 465 5.5E-99 T 11-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 AYJ52_13130 81ddf57e595fefa29d2949c07dc597d7 471 Gene3D G3DSA:1.10.4160.10 4 465 3.8E-44 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily AYJ52_13130 81ddf57e595fefa29d2949c07dc597d7 471 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 21 442 3.1E-49 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 AYJ52_17985 0f31c103b772171253b6eb22ee7b3c0b 276 Gene3D G3DSA:3.40.50.1820 8 270 8.8E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17985 0f31c103b772171253b6eb22ee7b3c0b 276 Pfam PF00561 alpha/beta hydrolase fold 33 252 7.6E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_17985 0f31c103b772171253b6eb22ee7b3c0b 276 SUPERFAMILY SSF53474 12 268 2.52E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15545 99039ad6bb072e7b1b5b32c4b7ffc1f3 154 Gene3D G3DSA:1.10.10.10 3 153 2.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15545 99039ad6bb072e7b1b5b32c4b7ffc1f3 154 Pfam PF12802 MarR family 43 101 2.9E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_15545 99039ad6bb072e7b1b5b32c4b7ffc1f3 154 SUPERFAMILY SSF46785 12 153 9.1E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_15545 99039ad6bb072e7b1b5b32c4b7ffc1f3 154 SMART SM00347 38 138 3.4E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AYJ52_07680 b7245ff2a66cd615e94ad369397ab89e 437 SUPERFAMILY SSF141371 325 430 2.82E-5 T 11-10-2018 AYJ52_07680 b7245ff2a66cd615e94ad369397ab89e 437 Pfam PF00561 alpha/beta hydrolase fold 58 293 2.2E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_07680 b7245ff2a66cd615e94ad369397ab89e 437 Gene3D G3DSA:3.40.50.1820 26 308 7.1E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_07680 b7245ff2a66cd615e94ad369397ab89e 437 SUPERFAMILY SSF53474 35 307 6.51E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_14135 70bc42003042f5916b97089c20495ab8 213 Gene3D G3DSA:3.40.1080.10 2 210 1.4E-103 T 11-10-2018 AYJ52_14135 70bc42003042f5916b97089c20495ab8 213 Pfam PF01144 Coenzyme A transferase 7 199 1.1E-44 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_14135 70bc42003042f5916b97089c20495ab8 213 SUPERFAMILY SSF100950 3 209 1.14E-75 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_14135 70bc42003042f5916b97089c20495ab8 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 1.3E-99 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AYJ52_14135 70bc42003042f5916b97089c20495ab8 213 SMART SM00882 6 202 4.6E-78 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_14135 70bc42003042f5916b97089c20495ab8 213 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 AYJ52_12705 ec4705de57ea1e842857b453ab644da4 294 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 17 280 1.4E-65 T 11-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AYJ52_12705 ec4705de57ea1e842857b453ab644da4 294 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 14 283 3.6E-97 T 11-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AYJ52_12705 ec4705de57ea1e842857b453ab644da4 294 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 294 137.878 T 11-10-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AYJ52_11405 ccfa26b5ee6d38e6e9ad393663111cef 64 ProSitePatterns PS01047 Heavy-metal-associated domain. 5 34 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AYJ52_11405 ccfa26b5ee6d38e6e9ad393663111cef 64 Gene3D G3DSA:3.30.70.100 1 61 2.2E-18 T 11-10-2018 AYJ52_11405 ccfa26b5ee6d38e6e9ad393663111cef 64 Pfam PF00403 Heavy-metal-associated domain 4 58 7.1E-13 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AYJ52_11405 ccfa26b5ee6d38e6e9ad393663111cef 64 SUPERFAMILY SSF55008 2 62 4.32E-16 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AYJ52_02755 908f39d7fe0e9d4a11eecd0fc4cf5b25 271 Gene3D G3DSA:3.40.50.720 1 268 2.0E-49 T 11-10-2018 AYJ52_02755 908f39d7fe0e9d4a11eecd0fc4cf5b25 271 Pfam PF13460 NAD(P)H-binding 9 192 4.8E-7 T 11-10-2018 IPR016040 NAD(P)-binding domain AYJ52_02755 908f39d7fe0e9d4a11eecd0fc4cf5b25 271 SUPERFAMILY SSF51735 13 228 2.12E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_12395 7b527a3d6575869926fb5253752d51c1 144 SUPERFAMILY SSF54637 4 140 4.03E-35 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_12395 7b527a3d6575869926fb5253752d51c1 144 Pfam PF03061 Thioesterase superfamily 56 132 2.7E-12 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AYJ52_12395 7b527a3d6575869926fb5253752d51c1 144 Gene3D G3DSA:3.10.129.10 7 144 2.4E-35 T 11-10-2018 AYJ52_12395 7b527a3d6575869926fb5253752d51c1 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 140 5.6E-18 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AYJ52_16880 dc8fe74c7d699e01efdb4830a6330096 336 Pfam PF12833 Helix-turn-helix domain 253 329 3.8E-12 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_16880 dc8fe74c7d699e01efdb4830a6330096 336 SUPERFAMILY SSF46689 282 330 9.86E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_16880 dc8fe74c7d699e01efdb4830a6330096 336 Gene3D G3DSA:1.10.10.60 233 334 5.6E-19 T 11-10-2018 AYJ52_16880 dc8fe74c7d699e01efdb4830a6330096 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 202 1.4E-42 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_16880 dc8fe74c7d699e01efdb4830a6330096 336 SMART SM00342 246 328 8.6E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_03945 507c2984607e470302a57344f404289c 569 Gene3D G3DSA:3.30.70.270 398 568 6.4E-45 T 11-10-2018 AYJ52_03945 507c2984607e470302a57344f404289c 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 411 565 2.3E-39 T 11-10-2018 IPR000160 GGDEF domain AYJ52_03945 507c2984607e470302a57344f404289c 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 407 568 1.8E-43 T 11-10-2018 IPR000160 GGDEF domain AYJ52_03945 507c2984607e470302a57344f404289c 569 SUPERFAMILY SSF55073 416 567 4.71E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_03945 507c2984607e470302a57344f404289c 569 SMART SM00267 400 568 1.0E-41 T 11-10-2018 IPR000160 GGDEF domain AYJ52_15135 be7575c2eac7a9df11bed3ffcd948fc5 288 Gene3D G3DSA:3.60.15.10 2 288 1.5E-100 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_15135 be7575c2eac7a9df11bed3ffcd948fc5 288 SUPERFAMILY SSF56281 9 288 6.36E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_15135 be7575c2eac7a9df11bed3ffcd948fc5 288 SMART SM00849 15 205 6.1E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_15135 be7575c2eac7a9df11bed3ffcd948fc5 288 Pfam PF00753 Metallo-beta-lactamase superfamily 15 205 6.0E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_12645 aaf7a0b4753df4a032ce032f96573750 286 Pfam PF02798 Glutathione S-transferase, N-terminal domain 43 123 9.7E-8 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_12645 aaf7a0b4753df4a032ce032f96573750 286 SUPERFAMILY SSF52833 32 126 9.75E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_12645 aaf7a0b4753df4a032ce032f96573750 286 Gene3D G3DSA:1.20.1050.10 129 245 1.6E-110 T 11-10-2018 AYJ52_12645 aaf7a0b4753df4a032ce032f96573750 286 SUPERFAMILY SSF47616 113 255 1.06E-35 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_12645 aaf7a0b4753df4a032ce032f96573750 286 Gene3D G3DSA:3.40.30.10 17 251 1.6E-110 T 11-10-2018 AYJ52_12645 aaf7a0b4753df4a032ce032f96573750 286 Pfam PF00043 Glutathione S-transferase, C-terminal domain 178 246 1.2E-11 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AYJ52_10130 e1c48e1cca47bb4cfe1623fe27c9a5af 419 SUPERFAMILY SSF53448 40 324 2.53E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_10130 e1c48e1cca47bb4cfe1623fe27c9a5af 419 Pfam PF13641 Glycosyltransferase like family 2 53 277 1.0E-36 T 11-10-2018 AYJ52_10130 e1c48e1cca47bb4cfe1623fe27c9a5af 419 Gene3D G3DSA:3.90.550.10 32 265 1.2E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_10130 e1c48e1cca47bb4cfe1623fe27c9a5af 419 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 12 416 2.8E-182 T 11-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 AYJ52_10350 6c1b05c53315a914179f3d5436b9f56f 204 SMART SM00947 38 203 3.9E-51 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AYJ52_10350 6c1b05c53315a914179f3d5436b9f56f 204 Gene3D G3DSA:3.40.1050.10 1 204 3.9E-61 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AYJ52_10350 6c1b05c53315a914179f3d5436b9f56f 204 SUPERFAMILY SSF53056 3 203 1.83E-52 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AYJ52_10350 6c1b05c53315a914179f3d5436b9f56f 204 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 50 57 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AYJ52_10350 6c1b05c53315a914179f3d5436b9f56f 204 Pfam PF00484 Carbonic anhydrase 45 199 4.9E-37 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AYJ52_13165 ec9cd803e05db04d88726c9c1daab4d4 339 Pfam PF00419 Fimbrial protein 182 338 1.0E-17 T 11-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AYJ52_13165 ec9cd803e05db04d88726c9c1daab4d4 339 Gene3D G3DSA:2.60.40.3310 23 192 1.8E-46 T 11-10-2018 AYJ52_13165 ec9cd803e05db04d88726c9c1daab4d4 339 Gene3D G3DSA:2.60.40.1090 193 339 5.5E-24 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AYJ52_13165 ec9cd803e05db04d88726c9c1daab4d4 339 SUPERFAMILY SSF49401 190 339 2.83E-18 T 11-10-2018 IPR008966 Adhesion domain superfamily AYJ52_03150 7ab9bf3d2bebd53aa84b288b1edd381b 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.742 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AYJ52_03150 7ab9bf3d2bebd53aa84b288b1edd381b 316 Gene3D G3DSA:3.40.50.11270 12 96 5.4E-114 T 11-10-2018 AYJ52_03150 7ab9bf3d2bebd53aa84b288b1edd381b 316 Gene3D G3DSA:3.40.1010.20 6 283 5.4E-114 T 11-10-2018 AYJ52_03150 7ab9bf3d2bebd53aa84b288b1edd381b 316 Gene3D G3DSA:3.40.1010.20 97 197 5.4E-114 T 11-10-2018 AYJ52_03150 7ab9bf3d2bebd53aa84b288b1edd381b 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 2.6E-101 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AYJ52_03150 7ab9bf3d2bebd53aa84b288b1edd381b 316 Pfam PF02401 LytB protein 3 283 3.8E-95 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AYJ52_16890 3a140a1d8cddca32fea23c9ca8fea726 108 Gene3D G3DSA:2.102.10.10 5 101 1.7E-25 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_16890 3a140a1d8cddca32fea23c9ca8fea726 108 SUPERFAMILY SSF50022 10 102 1.11E-23 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_16890 3a140a1d8cddca32fea23c9ca8fea726 108 Pfam PF00355 Rieske [2Fe-2S] domain 11 80 2.1E-12 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AYJ52_12090 0cb65ae1f11fb9fa9000022c71d8236d 317 SUPERFAMILY SSF55166 173 304 6.54E-25 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AYJ52_12090 0cb65ae1f11fb9fa9000022c71d8236d 317 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 228 292 1.5E-14 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 AYJ52_12090 0cb65ae1f11fb9fa9000022c71d8236d 317 Gene3D G3DSA:3.30.1380.10 167 293 3.7E-25 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AYJ52_08875 2da029e941989af0ea1ef1cd9750723e 331 Pfam PF00962 Adenosine/AMP deaminase 6 328 7.4E-91 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AYJ52_08875 2da029e941989af0ea1ef1cd9750723e 331 Gene3D G3DSA:3.20.20.140 1 331 3.1E-95 T 11-10-2018 AYJ52_08875 2da029e941989af0ea1ef1cd9750723e 331 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 4.7E-110 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AYJ52_08875 2da029e941989af0ea1ef1cd9750723e 331 SUPERFAMILY SSF51556 3 325 4.04E-73 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_08875 2da029e941989af0ea1ef1cd9750723e 331 Hamap MF_00540 Adenosine deaminase [add]. 1 331 51.896 T 11-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AYJ52_13145 9f335ac50182286e5dfeb936e97374bf 283 Gene3D G3DSA:3.40.190.290 93 278 1.8E-31 T 11-10-2018 AYJ52_13145 9f335ac50182286e5dfeb936e97374bf 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.3E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_13145 9f335ac50182286e5dfeb936e97374bf 283 Gene3D G3DSA:1.10.10.10 2 92 3.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_13145 9f335ac50182286e5dfeb936e97374bf 283 SUPERFAMILY SSF53850 89 280 2.35E-30 T 11-10-2018 AYJ52_13145 9f335ac50182286e5dfeb936e97374bf 283 SUPERFAMILY SSF46785 1 112 2.28E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_13145 9f335ac50182286e5dfeb936e97374bf 283 Pfam PF03466 LysR substrate binding domain 88 275 5.1E-27 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12910 24a7a9e8459cea19e43da54b8c46d5d6 1187 SMART SM00481 4 71 7.3E-12 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AYJ52_12910 24a7a9e8459cea19e43da54b8c46d5d6 1187 Gene3D G3DSA:3.20.20.140 1 261 1.1E-74 T 11-10-2018 AYJ52_12910 24a7a9e8459cea19e43da54b8c46d5d6 1187 Pfam PF14579 Helix-hairpin-helix motif 799 888 2.7E-27 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_12910 24a7a9e8459cea19e43da54b8c46d5d6 1187 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 989 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_12910 24a7a9e8459cea19e43da54b8c46d5d6 1187 SUPERFAMILY SSF89550 8 254 8.04E-12 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AYJ52_12910 24a7a9e8459cea19e43da54b8c46d5d6 1187 Pfam PF02811 PHP domain 6 162 1.9E-24 T 11-10-2018 IPR004013 PHP domain GO:0003824 AYJ52_12910 24a7a9e8459cea19e43da54b8c46d5d6 1187 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 283 725 1.9E-163 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_12910 24a7a9e8459cea19e43da54b8c46d5d6 1187 Gene3D G3DSA:1.10.10.1600 428 511 5.4E-25 T 11-10-2018 AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 SUPERFAMILY SSF51735 4 254 5.72E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.0E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.0E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.0E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 253 1.9E-51 T 11-10-2018 AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 Gene3D G3DSA:3.40.50.720 2 255 1.5E-63 T 11-10-2018 AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 102 122 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 82 99 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 9 26 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 206 225 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 232 251 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AYJ52_14265 267e613a49291c56e8c0c4aadb3dce3b 256 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 167 190 4.3E-45 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AYJ52_00200 b6103cd94d7cac91ba8c874b5111a842 468 PIRSF PIRSF006060 1 468 3.6E-68 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_00200 b6103cd94d7cac91ba8c874b5111a842 468 Gene3D G3DSA:1.20.1740.10 14 468 2.0E-62 T 11-10-2018 AYJ52_00200 b6103cd94d7cac91ba8c874b5111a842 468 Pfam PF00324 Amino acid permease 23 463 1.3E-102 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_00200 b6103cd94d7cac91ba8c874b5111a842 468 ProSitePatterns PS00218 Amino acid permeases signature. 48 78 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_04670 2635b949ba7aa696a0353754c63e42f8 245 Gene3D G3DSA:3.40.50.1820 1 244 1.0E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04670 2635b949ba7aa696a0353754c63e42f8 245 SUPERFAMILY SSF53474 6 244 3.24E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04670 2635b949ba7aa696a0353754c63e42f8 245 Pfam PF01738 Dienelactone hydrolase family 22 242 1.3E-45 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AYJ52_09870 bf8c5e0ae2e51fafbf1cb8f879c9a904 422 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 293 393 4.5E-10 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AYJ52_09870 bf8c5e0ae2e51fafbf1cb8f879c9a904 422 SUPERFAMILY SSF56300 9 354 2.06E-51 T 11-10-2018 AYJ52_09870 bf8c5e0ae2e51fafbf1cb8f879c9a904 422 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 9 264 3.0E-55 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AYJ52_09870 bf8c5e0ae2e51fafbf1cb8f879c9a904 422 Pfam PF00149 Calcineurin-like phosphoesterase 8 238 4.5E-16 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AYJ52_09870 bf8c5e0ae2e51fafbf1cb8f879c9a904 422 Gene3D G3DSA:3.60.21.10 2 289 4.5E-75 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AYJ52_12325 84047bef10a59e14006715176fab61dd 269 SUPERFAMILY SSF52096 13 266 1.15E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_12325 84047bef10a59e14006715176fab61dd 269 Gene3D G3DSA:3.90.226.10 13 209 5.9E-63 T 11-10-2018 AYJ52_12325 84047bef10a59e14006715176fab61dd 269 Gene3D G3DSA:1.10.12.10 210 266 1.8E-23 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AYJ52_12325 84047bef10a59e14006715176fab61dd 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 266 2.7E-56 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_09520 80c10cea977980a18516d90f8ea56d32 193 Gene3D G3DSA:3.40.50.1470 1 193 4.4E-76 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AYJ52_09520 80c10cea977980a18516d90f8ea56d32 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 181 35.192 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AYJ52_09520 80c10cea977980a18516d90f8ea56d32 193 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AYJ52_09520 80c10cea977980a18516d90f8ea56d32 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AYJ52_09520 80c10cea977980a18516d90f8ea56d32 193 SUPERFAMILY SSF53178 5 191 4.58E-69 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AYJ52_09520 80c10cea977980a18516d90f8ea56d32 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 2.3E-54 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AYJ52_09520 80c10cea977980a18516d90f8ea56d32 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 188 3.8E-65 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AYJ52_13350 3e73548b49efad94cd1a75b20222a117 400 SUPERFAMILY SSF118215 10 393 2.62E-89 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_13350 3e73548b49efad94cd1a75b20222a117 400 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 400 34.008 T 11-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AYJ52_13350 3e73548b49efad94cd1a75b20222a117 400 Gene3D G3DSA:1.10.3860.10 3 399 5.5E-71 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AYJ52_13350 3e73548b49efad94cd1a75b20222a117 400 PRINTS PR00173 Glutamate-aspartate symporter signature 283 309 3.1E-14 T 11-10-2018 AYJ52_13350 3e73548b49efad94cd1a75b20222a117 400 PRINTS PR00173 Glutamate-aspartate symporter signature 318 337 3.1E-14 T 11-10-2018 AYJ52_13350 3e73548b49efad94cd1a75b20222a117 400 PRINTS PR00173 Glutamate-aspartate symporter signature 181 200 3.1E-14 T 11-10-2018 AYJ52_13350 3e73548b49efad94cd1a75b20222a117 400 PRINTS PR00173 Glutamate-aspartate symporter signature 345 365 3.1E-14 T 11-10-2018 AYJ52_13350 3e73548b49efad94cd1a75b20222a117 400 PRINTS PR00173 Glutamate-aspartate symporter signature 3 28 3.1E-14 T 11-10-2018 AYJ52_13350 3e73548b49efad94cd1a75b20222a117 400 Pfam PF00375 Sodium:dicarboxylate symporter family 10 393 2.4E-63 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AYJ52_04620 07588cc793b98af0d3b0b92bd8750c4a 312 Gene3D G3DSA:1.20.1530.20 1 309 2.4E-119 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AYJ52_04620 07588cc793b98af0d3b0b92bd8750c4a 312 Pfam PF01758 Sodium Bile acid symporter family 43 219 1.1E-44 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AYJ52_00100 1fb47c354656a8f7962156c02fca1dfa 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 411 1.1E-153 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AYJ52_00100 1fb47c354656a8f7962156c02fca1dfa 411 Pfam PF12704 MacB-like periplasmic core domain 28 240 4.0E-15 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AYJ52_00100 1fb47c354656a8f7962156c02fca1dfa 411 Pfam PF02687 FtsX-like permease family 298 404 2.7E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AYJ52_13080 4fe99cd925c871636e36190fc45c774a 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 4.2E-18 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ52_13080 4fe99cd925c871636e36190fc45c774a 156 Gene3D G3DSA:3.30.70.920 56 140 2.3E-19 T 11-10-2018 AYJ52_13080 4fe99cd925c871636e36190fc45c774a 156 SUPERFAMILY SSF54909 68 144 2.32E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_13080 4fe99cd925c871636e36190fc45c774a 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 47 8.8E-10 T 11-10-2018 AYJ52_13080 4fe99cd925c871636e36190fc45c774a 156 SMART SM00344 3 112 9.3E-22 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_13080 4fe99cd925c871636e36190fc45c774a 156 Gene3D G3DSA:1.10.10.10 1 55 2.4E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_13080 4fe99cd925c871636e36190fc45c774a 156 SUPERFAMILY SSF46785 2 104 2.83E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_13450 3a19cd14d7a63ddb4e861f5338d2f4d4 253 Gene3D G3DSA:3.90.550.10 1 253 1.2E-92 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_13450 3a19cd14d7a63ddb4e861f5338d2f4d4 253 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 36.428 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AYJ52_13450 3a19cd14d7a63ddb4e861f5338d2f4d4 253 Pfam PF02348 Cytidylyltransferase 4 222 1.2E-49 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AYJ52_13450 3a19cd14d7a63ddb4e861f5338d2f4d4 253 SUPERFAMILY SSF53448 3 246 2.35E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_13450 3a19cd14d7a63ddb4e861f5338d2f4d4 253 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 242 2.0E-79 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AYJ52_18475 d75887693bc8226420a8039807746844 405 Gene3D G3DSA:1.25.40.10 50 157 1.0E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_18475 d75887693bc8226420a8039807746844 405 SUPERFAMILY SSF48452 60 139 3.29E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_04550 b592ea908f57a0c305fcd6c49e7e37f5 558 Pfam PF17392 Urocanase C-terminal domain 353 547 4.7E-92 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04550 b592ea908f57a0c305fcd6c49e7e37f5 558 PIRSF PIRSF001423 2 558 6.5E-297 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04550 b592ea908f57a0c305fcd6c49e7e37f5 558 Gene3D G3DSA:3.40.1770.10 18 543 2.8E-264 T 11-10-2018 AYJ52_04550 b592ea908f57a0c305fcd6c49e7e37f5 558 Hamap MF_00577 Urocanate hydratase [hutU]. 2 557 50.612 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04550 b592ea908f57a0c305fcd6c49e7e37f5 558 TIGRFAM TIGR01228 hutU: urocanate hydratase 12 555 0.0 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04550 b592ea908f57a0c305fcd6c49e7e37f5 558 ProSitePatterns PS01233 Urocanase signature. 443 458 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04550 b592ea908f57a0c305fcd6c49e7e37f5 558 Pfam PF01175 Urocanase Rossmann-like domain 142 350 2.7E-88 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04550 b592ea908f57a0c305fcd6c49e7e37f5 558 SUPERFAMILY SSF111326 8 556 6.93E-264 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04550 b592ea908f57a0c305fcd6c49e7e37f5 558 Gene3D G3DSA:3.40.50.10730 143 350 2.8E-264 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04550 b592ea908f57a0c305fcd6c49e7e37f5 558 Pfam PF17391 Urocanase N-terminal domain 13 139 3.3E-62 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_03170 f351ad9c0493c3bab0929119f6538061 127 SUPERFAMILY SSF55298 1 126 7.54E-44 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_03170 f351ad9c0493c3bab0929119f6538061 127 Gene3D G3DSA:3.30.1330.40 3 126 9.3E-50 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_03170 f351ad9c0493c3bab0929119f6538061 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 AYJ52_03170 f351ad9c0493c3bab0929119f6538061 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 3.6E-48 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AYJ52_03170 f351ad9c0493c3bab0929119f6538061 127 Pfam PF01042 Endoribonuclease L-PSP 8 124 4.0E-37 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AYJ52_11490 5537fe8bdc7c5bdbe89d28a8762f0d1e 310 PIRSF PIRSF026649 9 310 2.0E-78 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AYJ52_11490 5537fe8bdc7c5bdbe89d28a8762f0d1e 310 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 10 310 38.891 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AYJ52_11490 5537fe8bdc7c5bdbe89d28a8762f0d1e 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 301 3.8E-55 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AYJ52_17780 59b73b060df173866c3c7d20d9035568 184 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AYJ52_17780 59b73b060df173866c3c7d20d9035568 184 SUPERFAMILY SSF55620 2 181 7.41E-73 T 11-10-2018 AYJ52_17780 59b73b060df173866c3c7d20d9035568 184 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 3 180 1.2E-70 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AYJ52_17780 59b73b060df173866c3c7d20d9035568 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 35.092 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AYJ52_17780 59b73b060df173866c3c7d20d9035568 184 Gene3D G3DSA:3.30.1130.10 51 183 1.8E-58 T 11-10-2018 AYJ52_17780 59b73b060df173866c3c7d20d9035568 184 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 108 118 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AYJ52_17780 59b73b060df173866c3c7d20d9035568 184 Pfam PF01227 GTP cyclohydrolase I 4 180 6.6E-72 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AYJ52_17780 59b73b060df173866c3c7d20d9035568 184 Gene3D G3DSA:1.10.286.10 1 49 5.9E-17 T 11-10-2018 AYJ52_06895 e842986e5dbbae1a2af468863831ed84 174 Gene3D G3DSA:3.30.300.70 2 100 3.4E-17 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AYJ52_06895 e842986e5dbbae1a2af468863831ed84 174 Pfam PF17384 RimP C-terminal SH3 domain 107 172 2.5E-12 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AYJ52_06895 e842986e5dbbae1a2af468863831ed84 174 SUPERFAMILY SSF75420 4 103 7.98E-19 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AYJ52_06895 e842986e5dbbae1a2af468863831ed84 174 SUPERFAMILY SSF74942 104 173 6.02E-11 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AYJ52_06895 e842986e5dbbae1a2af468863831ed84 174 Pfam PF02576 RimP N-terminal domain 13 103 3.1E-19 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AYJ52_06895 e842986e5dbbae1a2af468863831ed84 174 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 174 21.154 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AYJ52_09255 69d11eef34e8ba2e8b007c624080028d 189 SUPERFAMILY SSF48498 80 181 1.78E-12 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_09255 69d11eef34e8ba2e8b007c624080028d 189 SUPERFAMILY SSF46689 3 75 3.64E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_09255 69d11eef34e8ba2e8b007c624080028d 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 3.4E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_09255 69d11eef34e8ba2e8b007c624080028d 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 6.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_09255 69d11eef34e8ba2e8b007c624080028d 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_09255 69d11eef34e8ba2e8b007c624080028d 189 Gene3D G3DSA:1.10.357.10 2 186 6.3E-29 T 11-10-2018 AYJ52_00075 0a3a90bf9c20502f5385eeedb1275a97 266 Gene3D G3DSA:3.40.50.1820 2 266 1.8E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_00075 0a3a90bf9c20502f5385eeedb1275a97 266 Pfam PF12697 Alpha/beta hydrolase family 48 258 1.3E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_00075 0a3a90bf9c20502f5385eeedb1275a97 266 SUPERFAMILY SSF53474 4 261 5.69E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_13820 6039ec31b46a071d664c438f7838af0f 247 Pfam PF02654 Cobalamin-5-phosphate synthase 7 236 8.1E-53 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AYJ52_13820 6039ec31b46a071d664c438f7838af0f 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 4 238 1.7E-40 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AYJ52_13820 6039ec31b46a071d664c438f7838af0f 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 43.086 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AYJ52_13495 99e8b2cac062b44081da26832d5b93a7 198 SUPERFAMILY SSF55620 1 145 1.22E-30 T 11-10-2018 AYJ52_13495 99e8b2cac062b44081da26832d5b93a7 198 Gene3D G3DSA:3.30.479.10 1 145 2.0E-23 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AYJ52_13495 99e8b2cac062b44081da26832d5b93a7 198 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 143 9.1E-26 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AYJ52_12755 5066eb051fc31b6e5250923c2b3133bb 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 323 8.9E-97 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AYJ52_12755 5066eb051fc31b6e5250923c2b3133bb 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 328 4.6E-47 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AYJ52_08920 c19b7232bc78df7ce8789b5b2671a433 377 SUPERFAMILY SSF54862 26 75 1.09E-5 T 11-10-2018 AYJ52_08920 c19b7232bc78df7ce8789b5b2671a433 377 TIGRFAM TIGR02484 CitB: CitB domain protein 15 375 2.4E-120 T 11-10-2018 IPR012830 Citrate utilization protein B AYJ52_08920 c19b7232bc78df7ce8789b5b2671a433 377 SUPERFAMILY SSF103501 158 368 8.76E-29 T 11-10-2018 IPR036197 NarG-like superfamily AYJ52_05230 57fedba8bd5e57949842e4ce78d59c74 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05230 57fedba8bd5e57949842e4ce78d59c74 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05230 57fedba8bd5e57949842e4ce78d59c74 215 SUPERFAMILY SSF46689 12 71 1.03E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_05230 57fedba8bd5e57949842e4ce78d59c74 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_05230 57fedba8bd5e57949842e4ce78d59c74 215 Gene3D G3DSA:1.10.357.10 5 170 2.6E-13 T 11-10-2018 AYJ52_11890 747d54ec0070332e52ebcd67d263369f 252 SUPERFAMILY SSF109604 62 201 2.86E-10 T 11-10-2018 AYJ52_11890 747d54ec0070332e52ebcd67d263369f 252 Gene3D G3DSA:1.10.3210.10 63 192 1.8E-6 T 11-10-2018 AYJ52_16300 7d6365912d867fde41914fe43aea2b5f 228 SUPERFAMILY SSF47616 78 224 3.02E-16 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_16300 7d6365912d867fde41914fe43aea2b5f 228 Pfam PF14497 Glutathione S-transferase, C-terminal domain 148 225 7.9E-9 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AYJ52_16300 7d6365912d867fde41914fe43aea2b5f 228 Gene3D G3DSA:1.20.1050.10 91 225 1.5E-13 T 11-10-2018 AYJ52_16300 7d6365912d867fde41914fe43aea2b5f 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 79 1.3E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_16300 7d6365912d867fde41914fe43aea2b5f 228 Gene3D G3DSA:3.40.30.10 3 90 1.6E-17 T 11-10-2018 AYJ52_16300 7d6365912d867fde41914fe43aea2b5f 228 SUPERFAMILY SSF52833 3 104 9.16E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_06320 51a112a9ab7051119c3c89f1e69b32bd 75 Pfam PF04380 Membrane fusogenic activity 5 69 2.6E-13 T 11-10-2018 IPR007475 Membrane fusogenic activity AYJ52_07245 51d341aaf78a2e6ed423b2b5a2507466 201 SUPERFAMILY SSF47616 80 194 6.82E-15 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_07245 51d341aaf78a2e6ed423b2b5a2507466 201 Gene3D G3DSA:3.40.30.10 5 193 9.1E-41 T 11-10-2018 AYJ52_07245 51d341aaf78a2e6ed423b2b5a2507466 201 Gene3D G3DSA:1.20.1050.10 82 189 9.1E-41 T 11-10-2018 AYJ52_07245 51d341aaf78a2e6ed423b2b5a2507466 201 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 9.9E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_07245 51d341aaf78a2e6ed423b2b5a2507466 201 Pfam PF14497 Glutathione S-transferase, C-terminal domain 135 194 5.7E-5 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AYJ52_07245 51d341aaf78a2e6ed423b2b5a2507466 201 SUPERFAMILY SSF52833 2 83 6.16E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_10860 365886246a80a239f06d615a5f0af262 256 SUPERFAMILY SSF54427 5 104 5.02E-22 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_10860 365886246a80a239f06d615a5f0af262 256 SUPERFAMILY SSF54427 133 240 9.14E-17 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_10860 365886246a80a239f06d615a5f0af262 256 Pfam PF12680 SnoaL-like domain 13 102 5.3E-13 T 11-10-2018 IPR037401 SnoaL-like domain AYJ52_10860 365886246a80a239f06d615a5f0af262 256 Pfam PF12680 SnoaL-like domain 146 235 5.1E-6 T 11-10-2018 IPR037401 SnoaL-like domain AYJ52_10860 365886246a80a239f06d615a5f0af262 256 Gene3D G3DSA:3.10.450.50 129 256 2.8E-23 T 11-10-2018 AYJ52_10860 365886246a80a239f06d615a5f0af262 256 Gene3D G3DSA:3.10.450.50 1 117 5.3E-29 T 11-10-2018 AYJ52_10570 f6490eb826b77b449d8e52096df382e7 159 PIRSF PIRSF004505 1 158 1.8E-50 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AYJ52_10570 f6490eb826b77b449d8e52096df382e7 159 SUPERFAMILY SSF75217 1 156 6.28E-51 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AYJ52_10570 f6490eb826b77b449d8e52096df382e7 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 158 28.425 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AYJ52_10570 f6490eb826b77b449d8e52096df382e7 159 Gene3D G3DSA:3.40.1280.10 1 158 1.1E-52 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ52_10570 f6490eb826b77b449d8e52096df382e7 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 157 4.1E-51 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AYJ52_10570 f6490eb826b77b449d8e52096df382e7 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 158 2.0E-53 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AYJ52_07410 a95b981630ae852dcae34c4a22e9f159 125 SUPERFAMILY SSF46785 13 115 7.14E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_07410 a95b981630ae852dcae34c4a22e9f159 125 Gene3D G3DSA:1.10.10.10 2 117 7.2E-41 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_07410 a95b981630ae852dcae34c4a22e9f159 125 Pfam PF01638 HxlR-like helix-turn-helix 23 112 6.9E-38 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AYJ52_11275 7caf4e69ebbf17f891aedea2e9ad29fe 812 Gene3D G3DSA:3.60.10.10 464 777 3.1E-37 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AYJ52_11275 7caf4e69ebbf17f891aedea2e9ad29fe 812 SUPERFAMILY SSF56219 456 780 1.73E-29 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AYJ52_11275 7caf4e69ebbf17f891aedea2e9ad29fe 812 Pfam PF00932 Lamin Tail Domain 25 129 1.8E-10 T 11-10-2018 IPR001322 Lamin tail domain AYJ52_09905 28df8de632e0ab63f1d439298f58b5f6 165 Pfam PF03061 Thioesterase superfamily 68 155 8.1E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AYJ52_09905 28df8de632e0ab63f1d439298f58b5f6 165 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 43 158 3.3E-12 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AYJ52_09905 28df8de632e0ab63f1d439298f58b5f6 165 Gene3D G3DSA:3.10.129.10 10 165 2.9E-41 T 11-10-2018 AYJ52_09905 28df8de632e0ab63f1d439298f58b5f6 165 SUPERFAMILY SSF54637 24 162 2.42E-21 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_08465 8f5743cf44ebec43b62cdaaed323ed36 160 SUPERFAMILY SSF55083 4 147 1.57E-47 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AYJ52_08465 8f5743cf44ebec43b62cdaaed323ed36 160 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 86 97 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AYJ52_08465 8f5743cf44ebec43b62cdaaed323ed36 160 Gene3D G3DSA:3.30.70.560 2 153 4.0E-50 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AYJ52_08465 8f5743cf44ebec43b62cdaaed323ed36 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 1.7E-35 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AYJ52_08465 8f5743cf44ebec43b62cdaaed323ed36 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 130 1.1E-40 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AYJ52_14610 08d379e61049bd8f651292ceb91a37ed 338 SUPERFAMILY SSF81345 9 330 2.62E-70 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AYJ52_14610 08d379e61049bd8f651292ceb91a37ed 338 Gene3D G3DSA:1.10.3470.10 7 337 2.7E-88 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AYJ52_14610 08d379e61049bd8f651292ceb91a37ed 338 Pfam PF01032 FecCD transport family 17 330 1.8E-77 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AYJ52_15830 581c529de7aa0cdfe4ded60312a2cb7e 160 SUPERFAMILY SSF46785 6 143 3.13E-41 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_15830 581c529de7aa0cdfe4ded60312a2cb7e 160 Gene3D G3DSA:1.10.10.10 3 160 5.9E-51 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_15830 581c529de7aa0cdfe4ded60312a2cb7e 160 Pfam PF01638 HxlR-like helix-turn-helix 19 106 1.2E-22 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AYJ52_12820 cfd7a15eaa99e08309b4e6de2d9234ef 489 Gene3D G3DSA:1.10.4160.10 8 485 2.3E-103 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily AYJ52_12820 cfd7a15eaa99e08309b4e6de2d9234ef 489 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 25 461 1.1E-91 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 AYJ52_19615 e3461c016690923b75bfad7536e90181 293 Pfam PF01051 Initiator Replication protein 2 217 3.9E-57 T 11-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 AYJ52_19615 e3461c016690923b75bfad7536e90181 293 Gene3D G3DSA:1.10.10.10 134 226 1.2E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_19615 e3461c016690923b75bfad7536e90181 293 SUPERFAMILY SSF46785 2 122 3.3E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_19615 e3461c016690923b75bfad7536e90181 293 Gene3D G3DSA:1.10.10.10 1 133 2.9E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_19615 e3461c016690923b75bfad7536e90181 293 SUPERFAMILY SSF46785 122 220 3.88E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_13435 e9b753f7872c4997b59ea5f0c445cb99 142 Gene3D G3DSA:3.30.420.270 60 131 8.5E-7 T 11-10-2018 AYJ52_13435 e9b753f7872c4997b59ea5f0c445cb99 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 134 1.3E-24 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AYJ52_03840 72d020f7ca478c29288dfb7fefb3435b 290 PIRSF PIRSF006232 6 290 7.0E-83 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AYJ52_03840 72d020f7ca478c29288dfb7fefb3435b 290 Gene3D G3DSA:2.60.120.10 17 279 6.5E-79 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_03840 72d020f7ca478c29288dfb7fefb3435b 290 Pfam PF02678 Pirin 22 127 3.9E-31 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AYJ52_03840 72d020f7ca478c29288dfb7fefb3435b 290 SUPERFAMILY SSF51182 2 286 1.46E-76 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_03840 72d020f7ca478c29288dfb7fefb3435b 290 Gene3D G3DSA:2.60.120.10 149 253 6.5E-79 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_03840 72d020f7ca478c29288dfb7fefb3435b 290 Pfam PF05726 Pirin C-terminal cupin domain 183 284 3.0E-27 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AYJ52_12380 464ae6225de1c1d39da6c901b799fb06 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 AYJ52_12380 464ae6225de1c1d39da6c901b799fb06 217 SUPERFAMILY SSF100950 7 212 1.72E-58 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_12380 464ae6225de1c1d39da6c901b799fb06 217 SMART SM00882 9 206 2.0E-48 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_12380 464ae6225de1c1d39da6c901b799fb06 217 Pfam PF01144 Coenzyme A transferase 9 204 7.5E-36 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_12380 464ae6225de1c1d39da6c901b799fb06 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 7.0E-82 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AYJ52_12380 464ae6225de1c1d39da6c901b799fb06 217 Gene3D G3DSA:3.40.1080.10 3 215 1.4E-78 T 11-10-2018 AYJ52_05760 54d362fbc04def25c47cedfa56435267 315 Pfam PF05726 Pirin C-terminal cupin domain 191 285 2.8E-18 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AYJ52_05760 54d362fbc04def25c47cedfa56435267 315 Pfam PF02678 Pirin 40 138 8.6E-29 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AYJ52_05760 54d362fbc04def25c47cedfa56435267 315 PIRSF PIRSF006232 19 299 7.5E-74 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AYJ52_05760 54d362fbc04def25c47cedfa56435267 315 Gene3D G3DSA:2.60.120.10 20 263 6.0E-64 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_05760 54d362fbc04def25c47cedfa56435267 315 SUPERFAMILY SSF51182 34 297 1.46E-69 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_00085 24c66306cd564a4d2fb9c6a6590063d5 319 PIRSF PIRSF026649 1 285 3.2E-65 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AYJ52_00085 24c66306cd564a4d2fb9c6a6590063d5 319 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 277 7.2E-38 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AYJ52_04960 0aac167ff8d8aee4355164a37e269adf 83 Pfam PF04226 Transglycosylase associated protein 34 81 1.0E-12 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AYJ52_16310 127a90c34ddf397e800b9596afd62a70 819 Gene3D G3DSA:2.60.40.3110 261 343 9.4E-8 T 11-10-2018 AYJ52_16310 127a90c34ddf397e800b9596afd62a70 819 Pfam PF13953 PapC C-terminal domain 743 803 3.1E-9 T 11-10-2018 IPR025949 PapC-like, C-terminal domain AYJ52_16310 127a90c34ddf397e800b9596afd62a70 819 Pfam PF00577 Outer membrane usher protein 271 724 8.5E-26 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AYJ52_16310 127a90c34ddf397e800b9596afd62a70 819 Gene3D G3DSA:2.60.40.2610 648 738 2.8E-8 T 11-10-2018 AYJ52_09095 72ce0344eb8ae190899eb52a0744a54b 194 Gene3D G3DSA:3.40.50.1390 1 130 1.5E-6 T 11-10-2018 AYJ52_09095 72ce0344eb8ae190899eb52a0744a54b 194 SUPERFAMILY SSF53041 1 121 8.24E-8 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AYJ52_10035 6be81c4b6d0f218ff46d7abfd07a9dfc 637 Pfam PF07819 PGAP1-like protein 360 460 1.8E-6 T 11-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 AYJ52_10035 6be81c4b6d0f218ff46d7abfd07a9dfc 637 SUPERFAMILY SSF53474 356 613 2.54E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10035 6be81c4b6d0f218ff46d7abfd07a9dfc 637 Gene3D G3DSA:3.40.50.1820 354 608 1.7E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_12750 4f36545d6e1b1f250655a79c34e1b0b1 472 Gene3D G3DSA:1.10.10.10 2 67 1.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12750 4f36545d6e1b1f250655a79c34e1b0b1 472 Pfam PF00155 Aminotransferase class I and II 144 445 2.0E-32 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AYJ52_12750 4f36545d6e1b1f250655a79c34e1b0b1 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.0E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12750 4f36545d6e1b1f250655a79c34e1b0b1 472 SMART SM00345 7 66 6.6E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12750 4f36545d6e1b1f250655a79c34e1b0b1 472 Gene3D G3DSA:3.40.640.10 140 359 8.8E-82 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_12750 4f36545d6e1b1f250655a79c34e1b0b1 472 Gene3D G3DSA:3.90.1150.10 97 461 8.8E-82 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_12750 4f36545d6e1b1f250655a79c34e1b0b1 472 SUPERFAMILY SSF46785 5 76 2.15E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12750 4f36545d6e1b1f250655a79c34e1b0b1 472 SUPERFAMILY SSF53383 91 466 6.31E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_00835 c5ceadf901936f94377fbf27b25d813c 186 Pfam PF12724 Flavodoxin domain 8 77 2.9E-8 T 11-10-2018 IPR026816 Flavodoxin domain AYJ52_00835 c5ceadf901936f94377fbf27b25d813c 186 SUPERFAMILY SSF52218 5 184 9.83E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_00835 c5ceadf901936f94377fbf27b25d813c 186 Gene3D G3DSA:3.40.50.360 1 184 1.9E-55 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_07775 4e0d7ad32c7dedfb01ed0e61b976b8d9 82 Gene3D G3DSA:1.10.1200.10 1 82 8.0E-18 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_07775 4e0d7ad32c7dedfb01ed0e61b976b8d9 82 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 13.553 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AYJ52_07775 4e0d7ad32c7dedfb01ed0e61b976b8d9 82 SUPERFAMILY SSF47336 3 79 2.36E-17 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_07775 4e0d7ad32c7dedfb01ed0e61b976b8d9 82 Pfam PF00550 Phosphopantetheine attachment site 10 74 5.2E-11 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AYJ52_15405 45b441e2931d7b47800a45ab4dbeec59 202 Pfam PF07290 Protein of unknown function (DUF1449) 11 191 3.1E-21 T 11-10-2018 IPR010840 Protein of unknown function DUF1449 AYJ52_00150 25737c033db40d640852a80d4b03a131 365 Pfam PF12698 ABC-2 family transporter protein 19 357 8.2E-34 T 11-10-2018 AYJ52_00295 ac8e75d00f9aeb0b5fc7a222db716794 127 Pfam PF02036 SCP-2 sterol transfer family 34 108 1.7E-7 T 11-10-2018 IPR003033 SCP2 sterol-binding domain AYJ52_00295 ac8e75d00f9aeb0b5fc7a222db716794 127 SUPERFAMILY SSF55718 4 108 5.89E-12 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_00295 ac8e75d00f9aeb0b5fc7a222db716794 127 Gene3D G3DSA:3.30.1050.10 7 118 1.5E-12 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_02775 548f458b7ad46a03647d9352df80c56d 193 Pfam PF03641 Possible lysine decarboxylase 46 175 4.8E-40 T 11-10-2018 IPR031100 LOG family AYJ52_02775 548f458b7ad46a03647d9352df80c56d 193 SUPERFAMILY SSF102405 1 179 3.82E-61 T 11-10-2018 AYJ52_02775 548f458b7ad46a03647d9352df80c56d 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 7.6E-62 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AYJ52_02775 548f458b7ad46a03647d9352df80c56d 193 Gene3D G3DSA:3.40.50.450 1 192 8.9E-75 T 11-10-2018 AYJ52_04510 78c013d1da6206d0c5e9b6cdb046bb7a 207 PIRSF PIRSF006324 1 207 4.0E-52 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_04510 78c013d1da6206d0c5e9b6cdb046bb7a 207 Pfam PF01810 LysE type translocator 16 203 1.1E-31 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_13740 94ba72ee0b3b30658dd6ec86f643e8ef 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 7.9E-36 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_13740 94ba72ee0b3b30658dd6ec86f643e8ef 90 Gene3D G3DSA:4.10.520.10 1 90 5.4E-39 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AYJ52_13740 94ba72ee0b3b30658dd6ec86f643e8ef 90 SMART SM00411 1 90 1.3E-47 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_13740 94ba72ee0b3b30658dd6ec86f643e8ef 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AYJ52_13740 94ba72ee0b3b30658dd6ec86f643e8ef 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.3E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_13740 94ba72ee0b3b30658dd6ec86f643e8ef 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.3E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_13740 94ba72ee0b3b30658dd6ec86f643e8ef 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.3E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AYJ52_13740 94ba72ee0b3b30658dd6ec86f643e8ef 90 SUPERFAMILY SSF47729 1 89 2.06E-34 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AYJ52_15320 c5a6f6be4ce735e035129b619f4249fb 305 SUPERFAMILY SSF53474 2 300 2.61E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15320 c5a6f6be4ce735e035129b619f4249fb 305 Pfam PF12697 Alpha/beta hydrolase family 23 289 6.9E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15320 c5a6f6be4ce735e035129b619f4249fb 305 Gene3D G3DSA:3.40.50.1820 2 300 1.1E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17825 ff53cf343250b6029d05cc7e2d14fef5 244 Pfam PF00975 Thioesterase domain 8 234 7.2E-29 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AYJ52_17825 ff53cf343250b6029d05cc7e2d14fef5 244 Gene3D G3DSA:3.40.50.1820 5 243 4.1E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17825 ff53cf343250b6029d05cc7e2d14fef5 244 SUPERFAMILY SSF53474 4 226 6.8E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_18300 86efe0dbf7626c1265bf7f350efd9106 233 Pfam PF04402 Protein of unknown function (DUF541) 32 227 5.8E-25 T 11-10-2018 IPR007497 Protein of unknown function DUF541 AYJ52_18300 86efe0dbf7626c1265bf7f350efd9106 233 Gene3D G3DSA:3.30.110.170 34 225 8.3E-19 T 11-10-2018 AYJ52_18300 86efe0dbf7626c1265bf7f350efd9106 233 Gene3D G3DSA:3.30.70.2970 44 146 8.3E-19 T 11-10-2018 AYJ52_15475 29f26e5634d9868473777677ad088779 143 SMART SM00116 15 62 4.2E-8 T 11-10-2018 IPR000644 CBS domain AYJ52_15475 29f26e5634d9868473777677ad088779 143 SMART SM00116 80 127 1.2E-9 T 11-10-2018 IPR000644 CBS domain AYJ52_15475 29f26e5634d9868473777677ad088779 143 SUPERFAMILY SSF54631 8 141 5.05E-34 T 11-10-2018 AYJ52_15475 29f26e5634d9868473777677ad088779 143 Gene3D G3DSA:3.10.580.10 1 143 4.8E-46 T 11-10-2018 AYJ52_15475 29f26e5634d9868473777677ad088779 143 Pfam PF00571 CBS domain 15 59 3.4E-11 T 11-10-2018 IPR000644 CBS domain AYJ52_15475 29f26e5634d9868473777677ad088779 143 Pfam PF00571 CBS domain 73 127 2.0E-13 T 11-10-2018 IPR000644 CBS domain AYJ52_18695 9cc3fa1807d6bb751e1024f54dde675d 307 Gene3D G3DSA:3.40.190.10 167 266 1.8E-83 T 11-10-2018 AYJ52_18695 9cc3fa1807d6bb751e1024f54dde675d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18695 9cc3fa1807d6bb751e1024f54dde675d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18695 9cc3fa1807d6bb751e1024f54dde675d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18695 9cc3fa1807d6bb751e1024f54dde675d 307 SUPERFAMILY SSF53850 92 290 1.09E-36 T 11-10-2018 AYJ52_18695 9cc3fa1807d6bb751e1024f54dde675d 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18695 9cc3fa1807d6bb751e1024f54dde675d 307 Pfam PF03466 LysR substrate binding domain 91 277 4.3E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_18695 9cc3fa1807d6bb751e1024f54dde675d 307 SUPERFAMILY SSF46785 2 113 7.61E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_18695 9cc3fa1807d6bb751e1024f54dde675d 307 Gene3D G3DSA:1.10.10.10 1 86 3.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_18695 9cc3fa1807d6bb751e1024f54dde675d 307 Gene3D G3DSA:3.40.190.10 92 300 1.8E-83 T 11-10-2018 AYJ52_05000 22415104b1111b30fb94f197e8992029 416 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 49 382 4.2E-86 T 11-10-2018 IPR010640 Low temperature requirement A AYJ52_04965 312d82edcc5a05b5cffa97dfce66366f 175 Gene3D G3DSA:3.40.50.2020 2 175 3.9E-64 T 11-10-2018 AYJ52_04965 312d82edcc5a05b5cffa97dfce66366f 175 SUPERFAMILY SSF53271 7 173 1.84E-53 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AYJ52_04965 312d82edcc5a05b5cffa97dfce66366f 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 4.1E-68 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AYJ52_04965 312d82edcc5a05b5cffa97dfce66366f 175 Pfam PF00156 Phosphoribosyl transferase domain 13 160 9.7E-25 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AYJ52_19205 1d292c864f8e257a60c68520e98c4be0 121 Gene3D G3DSA:3.10.180.10 1 121 2.0E-40 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_19205 1d292c864f8e257a60c68520e98c4be0 121 SUPERFAMILY SSF54593 5 120 6.34E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_17800 21587c50e9ba2e248934d995f250b923 264 Pfam PF05675 Protein of unknown function (DUF817) 9 245 1.3E-82 T 11-10-2018 IPR008535 Protein of unknown function DUF817 AYJ52_17800 21587c50e9ba2e248934d995f250b923 264 PIRSF PIRSF009141 1 260 7.4E-74 T 11-10-2018 IPR008535 Protein of unknown function DUF817 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 SMART SM00028 182 215 1.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 SMART SM00028 116 149 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 SMART SM00028 216 249 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 SMART SM00028 488 521 7.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 SMART SM00028 350 383 290.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 SMART SM00028 385 418 2.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 SUPERFAMILY SSF48452 181 343 2.88E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 Pfam PF14559 Tetratricopeptide repeat 499 560 4.5E-6 T 11-10-2018 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 Gene3D G3DSA:1.25.40.10 345 428 5.5E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 Gene3D G3DSA:1.25.40.10 30 176 2.8E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 Gene3D G3DSA:1.25.40.10 177 344 6.1E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 Gene3D G3DSA:1.25.40.10 433 570 9.7E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 Pfam PF13181 Tetratricopeptide repeat 456 486 0.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 SUPERFAMILY SSF48452 94 148 8.18E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_09565 a121299f6d782233abdfe7de0fa89795 572 SUPERFAMILY SSF48452 391 511 3.13E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_09190 f08c0696103f20ee45163d33e9ec6cb2 532 Pfam PF00361 Proton-conducting membrane transporter 137 437 4.6E-66 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09190 f08c0696103f20ee45163d33e9ec6cb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 143 162 3.7E-34 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09190 f08c0696103f20ee45163d33e9ec6cb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 178 202 3.7E-34 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09190 f08c0696103f20ee45163d33e9ec6cb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 395 421 3.7E-34 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09190 f08c0696103f20ee45163d33e9ec6cb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 343 362 3.7E-34 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09190 f08c0696103f20ee45163d33e9ec6cb2 532 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 255 279 3.7E-34 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09190 f08c0696103f20ee45163d33e9ec6cb2 532 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 8 507 7.2E-158 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_11100 83ccbfaff976456bfbade2d722218007 319 Pfam PF10118 Predicted metal-dependent hydrolase 33 285 1.5E-64 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_11100 83ccbfaff976456bfbade2d722218007 319 PIRSF PIRSF007580 22 303 6.4E-51 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_01975 6e3f8a5b12ff132b46f20e364366b51c 269 Pfam PF01522 Polysaccharide deacetylase 84 226 6.1E-32 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AYJ52_01975 6e3f8a5b12ff132b46f20e364366b51c 269 SUPERFAMILY SSF88713 49 247 3.21E-43 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AYJ52_01975 6e3f8a5b12ff132b46f20e364366b51c 269 Gene3D G3DSA:3.20.20.370 26 261 2.5E-65 T 11-10-2018 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 352 372 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 169 186 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 244 258 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 259 277 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 330 347 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 214 233 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 191 207 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 PRINTS PR01486 Bacterial phospholipase A1 protein signature 294 312 2.5E-38 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 SUPERFAMILY SSF56931 118 382 3.01E-89 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 Pfam PF02253 Phospholipase A1 117 379 1.5E-104 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_15385 cd84dbb8eb02bc02cff7b99f5e8d390e 383 Gene3D G3DSA:2.40.230.10 123 383 2.1E-87 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AYJ52_12105 89a6232715a76a7dc72a89de97ca26eb 160 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 101 6.4E-22 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AYJ52_12105 89a6232715a76a7dc72a89de97ca26eb 160 Gene3D G3DSA:3.40.140.10 3 159 1.6E-49 T 11-10-2018 AYJ52_12105 89a6232715a76a7dc72a89de97ca26eb 160 SUPERFAMILY SSF53927 4 124 6.69E-39 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AYJ52_01835 12030fc76dbabb09bdac96618a612541 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 185 4.0E-51 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AYJ52_01835 12030fc76dbabb09bdac96618a612541 192 SUPERFAMILY SSF89028 7 185 1.31E-56 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AYJ52_01835 12030fc76dbabb09bdac96618a612541 192 Pfam PF01923 Cobalamin adenosyltransferase 8 172 2.6E-54 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AYJ52_01835 12030fc76dbabb09bdac96618a612541 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 26 186 3.0E-77 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AYJ52_01835 12030fc76dbabb09bdac96618a612541 192 Gene3D G3DSA:1.20.1200.10 17 189 1.9E-54 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AYJ52_04870 4f5467ade9c9b4af855865fce8f8a186 334 Gene3D G3DSA:3.40.190.170 47 242 1.1E-10 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AYJ52_02120 347d454517d51fcff46b4fcaf64f4ecc 111 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 4 105 3.3E-26 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AYJ52_02120 347d454517d51fcff46b4fcaf64f4ecc 111 Gene3D G3DSA:3.90.190.10 1 110 6.2E-30 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AYJ52_02120 347d454517d51fcff46b4fcaf64f4ecc 111 Pfam PF04273 Putative phosphatase (DUF442) 2 106 1.3E-29 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AYJ52_17980 3b4823c07db0092c0676867937c01824 310 PRINTS PR00412 Epoxide hydrolase signature 89 104 2.4E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_17980 3b4823c07db0092c0676867937c01824 310 PRINTS PR00412 Epoxide hydrolase signature 133 146 2.4E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_17980 3b4823c07db0092c0676867937c01824 310 PRINTS PR00412 Epoxide hydrolase signature 279 301 2.4E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_17980 3b4823c07db0092c0676867937c01824 310 Gene3D G3DSA:3.40.50.1820 37 307 5.2E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17980 3b4823c07db0092c0676867937c01824 310 Pfam PF12697 Alpha/beta hydrolase family 84 297 4.2E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_17980 3b4823c07db0092c0676867937c01824 310 SUPERFAMILY SSF53474 42 302 7.95E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_08340 990d413f295dc43cea756421afb3a83b 435 Gene3D G3DSA:3.30.70.100 166 245 1.2E-5 T 11-10-2018 AYJ52_08340 990d413f295dc43cea756421afb3a83b 435 Gene3D G3DSA:3.30.70.100 87 165 1.5E-5 T 11-10-2018 AYJ52_08340 990d413f295dc43cea756421afb3a83b 435 Gene3D G3DSA:1.20.1510.10 258 434 9.1E-11 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_08340 990d413f295dc43cea756421afb3a83b 435 SUPERFAMILY SSF161111 257 432 1.09E-31 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_08340 990d413f295dc43cea756421afb3a83b 435 Pfam PF01545 Cation efflux family 262 432 3.6E-13 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_08340 990d413f295dc43cea756421afb3a83b 435 SUPERFAMILY SSF55008 100 160 7.85E-8 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AYJ52_08340 990d413f295dc43cea756421afb3a83b 435 SUPERFAMILY SSF55008 177 238 1.1E-9 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AYJ52_15085 e375f3c3c47606a3d56053bde4c2b3de 369 ProSitePatterns PS00571 Amidases signature. 94 125 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AYJ52_15085 e375f3c3c47606a3d56053bde4c2b3de 369 Pfam PF01425 Amidase 229 358 1.0E-19 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_15085 e375f3c3c47606a3d56053bde4c2b3de 369 Pfam PF01425 Amidase 17 173 4.7E-61 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_15085 e375f3c3c47606a3d56053bde4c2b3de 369 SUPERFAMILY SSF75304 17 367 3.92E-95 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_15085 e375f3c3c47606a3d56053bde4c2b3de 369 Gene3D G3DSA:3.90.1300.10 13 368 1.0E-99 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AYJ52_18330 0d22beaa9f8fae27e5542c995c5a9230 212 Gene3D G3DSA:3.30.2350.10 5 211 5.7E-63 T 11-10-2018 AYJ52_18330 0d22beaa9f8fae27e5542c995c5a9230 212 Pfam PF00849 RNA pseudouridylate synthase 15 163 2.8E-26 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_18330 0d22beaa9f8fae27e5542c995c5a9230 212 SUPERFAMILY SSF55120 7 211 3.2E-61 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_18330 0d22beaa9f8fae27e5542c995c5a9230 212 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 52 66 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_05350 b42c8c3e1d9a6d294e454df5c72866b8 206 Pfam PF02397 Bacterial sugar transferase 2 176 1.7E-64 T 11-10-2018 IPR003362 Bacterial sugar transferase AYJ52_05585 70bf41e908f4c73975c3e85affd8b4e4 479 PIRSF PIRSF006060 3 478 6.1E-70 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_05585 70bf41e908f4c73975c3e85affd8b4e4 479 Gene3D G3DSA:1.20.1740.10 14 477 2.0E-64 T 11-10-2018 AYJ52_05585 70bf41e908f4c73975c3e85affd8b4e4 479 Pfam PF00324 Amino acid permease 24 467 7.4E-108 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_05585 70bf41e908f4c73975c3e85affd8b4e4 479 ProSitePatterns PS00218 Amino acid permeases signature. 49 79 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_08370 c3c6e084cfca02176dea4e1621fe2c6b 136 Gene3D G3DSA:3.30.1330.40 5 136 1.4E-25 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_08370 c3c6e084cfca02176dea4e1621fe2c6b 136 SUPERFAMILY SSF55298 5 135 2.67E-25 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AYJ52_08370 c3c6e084cfca02176dea4e1621fe2c6b 136 Pfam PF01042 Endoribonuclease L-PSP 20 134 3.1E-19 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AYJ52_02680 8efd1c43580307ec9446753af77c83c2 106 Gene3D G3DSA:3.30.70.330 1 97 3.4E-32 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AYJ52_02680 8efd1c43580307ec9446753af77c83c2 106 SUPERFAMILY SSF54189 2 91 3.96E-31 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02680 8efd1c43580307ec9446753af77c83c2 106 Pfam PF00276 Ribosomal protein L23 9 93 2.4E-28 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AYJ52_02680 8efd1c43580307ec9446753af77c83c2 106 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 21.066 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AYJ52_16375 b8b6112a465103628288530af7933807 478 TIGRFAM TIGR00908 2A0305: ethanolamine permease 24 467 2.0E-177 T 11-10-2018 IPR004757 Ethanolamine permease AYJ52_16375 b8b6112a465103628288530af7933807 478 Gene3D G3DSA:1.20.1740.10 26 472 5.6E-57 T 11-10-2018 AYJ52_16375 b8b6112a465103628288530af7933807 478 PIRSF PIRSF006060 10 477 1.1E-71 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_16375 b8b6112a465103628288530af7933807 478 Pfam PF13520 Amino acid permease 41 446 7.3E-41 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_17010 b64157c2ab86214b760dc95f1ef564f8 269 Pfam PF04403 Paraquat-inducible protein A 73 233 1.8E-52 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AYJ52_02605 0641093f89eb2237c5bc8e1c4bb0cdba 165 Gene3D G3DSA:3.30.230.10 73 165 1.2E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_02605 0641093f89eb2237c5bc8e1c4bb0cdba 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 162 3.5E-65 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AYJ52_02605 0641093f89eb2237c5bc8e1c4bb0cdba 165 SUPERFAMILY SSF54211 79 158 2.2E-26 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_02605 0641093f89eb2237c5bc8e1c4bb0cdba 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 34.042 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AYJ52_02605 0641093f89eb2237c5bc8e1c4bb0cdba 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 156 1.9E-29 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AYJ52_02605 0641093f89eb2237c5bc8e1c4bb0cdba 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 73 2.6E-27 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AYJ52_02605 0641093f89eb2237c5bc8e1c4bb0cdba 165 Gene3D G3DSA:3.30.160.20 1 72 4.6E-29 T 11-10-2018 AYJ52_02605 0641093f89eb2237c5bc8e1c4bb0cdba 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AYJ52_02605 0641093f89eb2237c5bc8e1c4bb0cdba 165 SUPERFAMILY SSF54768 7 75 9.42E-23 T 11-10-2018 AYJ52_12410 39b42e6201d658936b61de440bbc755b 1160 SUPERFAMILY SSF52518 29 205 1.47E-15 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_12410 39b42e6201d658936b61de440bbc755b 1160 SUPERFAMILY SSF52922 277 358 1.41E-5 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AYJ52_12410 39b42e6201d658936b61de440bbc755b 1160 Gene3D G3DSA:3.40.50.970 16 231 1.3E-23 T 11-10-2018 AYJ52_12410 39b42e6201d658936b61de440bbc755b 1160 SUPERFAMILY SSF53323 740 980 1.96E-28 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AYJ52_12410 39b42e6201d658936b61de440bbc755b 1160 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 747 932 1.6E-27 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AYJ52_12410 39b42e6201d658936b61de440bbc755b 1160 Gene3D G3DSA:3.40.920.10 738 942 1.6E-23 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AYJ52_12410 39b42e6201d658936b61de440bbc755b 1160 SUPERFAMILY SSF52518 455 632 4.71E-12 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AYJ52_13885 1d483c988fdd3789998074e90696098c 89 SMART SM01324 11 84 2.1E-18 T 11-10-2018 IPR025582 YARHG domain AYJ52_13885 1d483c988fdd3789998074e90696098c 89 Pfam PF13308 YARHG domain 36 83 1.4E-6 T 11-10-2018 IPR025582 YARHG domain AYJ52_09360 cb2c16b0a58b73ad57138e9e5732bc6d 250 Pfam PF03099 Biotin/lipoate A/B protein ligase family 39 141 1.5E-9 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AYJ52_09360 cb2c16b0a58b73ad57138e9e5732bc6d 250 Gene3D G3DSA:3.30.930.10 1 200 9.5E-37 T 11-10-2018 AYJ52_09360 cb2c16b0a58b73ad57138e9e5732bc6d 250 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 25 242 1.3E-38 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AYJ52_09360 cb2c16b0a58b73ad57138e9e5732bc6d 250 SUPERFAMILY SSF55681 13 188 3.98E-34 T 11-10-2018 AYJ52_12075 bcbfe5ac3de792985c1fa2041b57b9e3 454 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 451 5.1E-125 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AYJ52_12075 bcbfe5ac3de792985c1fa2041b57b9e3 454 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 453 1.7E-142 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AYJ52_03005 f43a35f7720d02815af4d82fe4814b4e 214 SUPERFAMILY SSF52540 1 200 1.45E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_03005 f43a35f7720d02815af4d82fe4814b4e 214 PIRSF PIRSF009320 1 211 1.3E-30 T 11-10-2018 AYJ52_03005 f43a35f7720d02815af4d82fe4814b4e 214 Gene3D G3DSA:3.40.50.300 1 208 1.1E-41 T 11-10-2018 AYJ52_03005 f43a35f7720d02815af4d82fe4814b4e 214 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 161 3.0E-17 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AYJ52_19215 c0e6ca88115aa66847162269bf52e5a2 343 Pfam PF11412 Disulphide bond corrector protein DsbC 32 145 1.8E-30 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AYJ52_19215 c0e6ca88115aa66847162269bf52e5a2 343 SUPERFAMILY SSF74863 32 145 1.57E-31 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AYJ52_19215 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:3.30.360.10 155 281 1.1E-31 T 11-10-2018 AYJ52_19215 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:3.30.360.10 282 343 3.3E-17 T 11-10-2018 AYJ52_19215 c0e6ca88115aa66847162269bf52e5a2 343 Gene3D G3DSA:2.60.40.1250 24 154 3.6E-38 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AYJ52_06645 7fbe5791b194f177d8895deb865fa1b6 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 1.1E-31 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_06645 7fbe5791b194f177d8895deb865fa1b6 123 SUPERFAMILY SSF54736 52 123 3.49E-25 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AYJ52_06645 7fbe5791b194f177d8895deb865fa1b6 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 95 9.0E-14 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_06645 7fbe5791b194f177d8895deb865fa1b6 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 24.582 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_06645 7fbe5791b194f177d8895deb865fa1b6 123 Gene3D G3DSA:1.20.5.710 2 52 2.3E-18 T 11-10-2018 AYJ52_06645 7fbe5791b194f177d8895deb865fa1b6 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 6.9E-16 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_06645 7fbe5791b194f177d8895deb865fa1b6 123 Gene3D G3DSA:3.30.1390.10 53 123 1.9E-32 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AYJ52_06645 7fbe5791b194f177d8895deb865fa1b6 123 SUPERFAMILY SSF48300 4 59 2.88E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_06645 7fbe5791b194f177d8895deb865fa1b6 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.6E-46 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_17970 a73f4da1c8f0354cee1d4527a252fffa 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 47 55 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 AYJ52_17970 a73f4da1c8f0354cee1d4527a252fffa 217 Pfam PF01144 Coenzyme A transferase 9 204 6.1E-39 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_17970 a73f4da1c8f0354cee1d4527a252fffa 217 SUPERFAMILY SSF100950 8 212 1.36E-64 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AYJ52_17970 a73f4da1c8f0354cee1d4527a252fffa 217 Gene3D G3DSA:3.40.1080.10 4 215 3.6E-85 T 11-10-2018 AYJ52_17970 a73f4da1c8f0354cee1d4527a252fffa 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 1.4E-89 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AYJ52_17970 a73f4da1c8f0354cee1d4527a252fffa 217 SMART SM00882 9 206 4.8E-65 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AYJ52_14440 bdaddffc8ec69e732ae464a922fbdc84 78 Gene3D G3DSA:1.20.5.440 34 77 2.3E-6 T 11-10-2018 AYJ52_06710 2ba72a2e8d957ec4c27050dc2077ad5e 233 Gene3D G3DSA:3.40.30.10 1 207 6.9E-70 T 11-10-2018 AYJ52_06710 2ba72a2e8d957ec4c27050dc2077ad5e 233 SUPERFAMILY SSF52833 1 206 2.24E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_06710 2ba72a2e8d957ec4c27050dc2077ad5e 233 Pfam PF01323 DSBA-like thioredoxin domain 2 203 9.7E-45 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AYJ52_17295 f6e54df8d56e2b2bd28e4c43b1a0e648 324 SUPERFAMILY SSF56281 4 309 1.47E-59 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_17295 f6e54df8d56e2b2bd28e4c43b1a0e648 324 Pfam PF00753 Metallo-beta-lactamase superfamily 29 98 2.5E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_17295 f6e54df8d56e2b2bd28e4c43b1a0e648 324 Hamap MF_01818 Ribonuclease BN [rbn]. 2 308 28.713 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 AYJ52_17295 f6e54df8d56e2b2bd28e4c43b1a0e648 324 Gene3D G3DSA:3.60.15.10 2 308 3.8E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_16740 b6da6db91a1327b6209be819192e12e3 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.648 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_16740 b6da6db91a1327b6209be819192e12e3 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16740 b6da6db91a1327b6209be819192e12e3 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 2.5E-26 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal AYJ52_16740 b6da6db91a1327b6209be819192e12e3 148 Gene3D G3DSA:3.40.5.10 1 50 1.0E-21 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16740 b6da6db91a1327b6209be819192e12e3 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 2 148 5.6E-49 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_16740 b6da6db91a1327b6209be819192e12e3 148 SUPERFAMILY SSF55658 1 57 4.53E-18 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AYJ52_16740 b6da6db91a1327b6209be819192e12e3 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 2 46 7.8E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_16740 b6da6db91a1327b6209be819192e12e3 148 Gene3D G3DSA:3.10.430.100 61 148 2.8E-29 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AYJ52_16740 b6da6db91a1327b6209be819192e12e3 148 SUPERFAMILY SSF55653 60 148 2.62E-26 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AYJ52_18760 db7071cc9341b9ef538656d38f1cef8c 387 Pfam PF03235 Protein of unknown function DUF262 53 189 1.0E-22 T 11-10-2018 IPR004919 Domain of unknown function DUF262 AYJ52_11580 3fcff68cb6a58da1bcc54a6e66005d84 589 SUPERFAMILY SSF51905 10 535 9.58E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11580 3fcff68cb6a58da1bcc54a6e66005d84 589 Gene3D G3DSA:3.50.50.60 200 339 5.0E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_11580 3fcff68cb6a58da1bcc54a6e66005d84 589 Pfam PF01593 Flavin containing amine oxidoreductase 20 287 5.0E-13 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AYJ52_11580 3fcff68cb6a58da1bcc54a6e66005d84 589 Gene3D G3DSA:3.50.50.60 11 94 2.6E-18 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_12875 b27fc34401bbd35eb683789843b35a81 186 Pfam PF02417 Chromate transporter 18 174 2.6E-31 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AYJ52_08180 e4853e82c0d7f35d7ec05a17121b1e32 270 SUPERFAMILY SSF51556 3 268 8.98E-69 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_08180 e4853e82c0d7f35d7ec05a17121b1e32 270 PIRSF PIRSF005902 1 270 1.2E-58 T 11-10-2018 IPR001130 TatD family GO:0016788 AYJ52_08180 e4853e82c0d7f35d7ec05a17121b1e32 270 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AYJ52_08180 e4853e82c0d7f35d7ec05a17121b1e32 270 Pfam PF01026 TatD related DNase 4 266 8.2E-58 T 11-10-2018 IPR001130 TatD family GO:0016788 AYJ52_08180 e4853e82c0d7f35d7ec05a17121b1e32 270 Gene3D G3DSA:3.20.20.140 1 268 5.9E-70 T 11-10-2018 AYJ52_13490 a981b1381c526820f2fbe017fed4ea78 319 Gene3D G3DSA:1.10.40.60 211 278 7.4E-71 T 11-10-2018 IPR038072 GspK, central domain superfamily AYJ52_13490 a981b1381c526820f2fbe017fed4ea78 319 SUPERFAMILY SSF158544 105 209 1.39E-30 T 11-10-2018 IPR038072 GspK, central domain superfamily AYJ52_13490 a981b1381c526820f2fbe017fed4ea78 319 Pfam PF03934 Type II secretion system (T2SS), protein K 34 310 7.3E-76 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AYJ52_13490 a981b1381c526820f2fbe017fed4ea78 319 Gene3D G3DSA:3.30.1300.30 46 303 7.4E-71 T 11-10-2018 AYJ52_13490 a981b1381c526820f2fbe017fed4ea78 319 Gene3D G3DSA:1.10.40.60 103 210 7.4E-71 T 11-10-2018 IPR038072 GspK, central domain superfamily AYJ52_13490 a981b1381c526820f2fbe017fed4ea78 319 SUPERFAMILY SSF54523 41 313 3.61E-21 T 11-10-2018 AYJ52_13490 a981b1381c526820f2fbe017fed4ea78 319 PIRSF PIRSF002786 4 317 1.0E-90 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AYJ52_07475 58fb86f600c4cf779c72c8ec6ab297c0 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 226 233 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AYJ52_07475 58fb86f600c4cf779c72c8ec6ab297c0 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 254 265 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AYJ52_07475 58fb86f600c4cf779c72c8ec6ab297c0 482 Pfam PF00171 Aldehyde dehydrogenase family 38 445 4.4E-90 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_07475 58fb86f600c4cf779c72c8ec6ab297c0 482 Gene3D G3DSA:3.40.309.10 230 432 4.4E-148 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_07475 58fb86f600c4cf779c72c8ec6ab297c0 482 Gene3D G3DSA:3.40.605.10 34 452 4.4E-148 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_07475 58fb86f600c4cf779c72c8ec6ab297c0 482 PIRSF PIRSF036492 2 482 3.1E-156 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AYJ52_07475 58fb86f600c4cf779c72c8ec6ab297c0 482 SUPERFAMILY SSF53720 15 476 8.9E-114 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_12180 dcbe3e54591e5437ff4ff54ae8fe7bde 166 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 18 166 8.2E-57 T 11-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit AYJ52_12180 dcbe3e54591e5437ff4ff54ae8fe7bde 166 Pfam PF01883 Iron-sulfur cluster assembly protein 10 71 3.2E-13 T 11-10-2018 IPR002744 MIP18 family-like AYJ52_12180 dcbe3e54591e5437ff4ff54ae8fe7bde 166 Gene3D G3DSA:3.30.300.130 4 104 3.4E-26 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AYJ52_12180 dcbe3e54591e5437ff4ff54ae8fe7bde 166 SUPERFAMILY SSF117916 8 102 3.14E-24 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AYJ52_01205 780c8bf7c01086121d166c38c196ab70 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 258 1.4E-77 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AYJ52_01205 780c8bf7c01086121d166c38c196ab70 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 265 18.238 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AYJ52_01205 780c8bf7c01086121d166c38c196ab70 272 Pfam PF02673 Bacitracin resistance protein BacA 9 260 5.8E-84 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AYJ52_13520 d4595208210370bc9a9d863a4432a346 226 Pfam PF02224 Cytidylate kinase 6 221 9.3E-67 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AYJ52_13520 d4595208210370bc9a9d863a4432a346 226 Hamap MF_00238 Cytidylate kinase [cmk]. 4 225 32.456 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AYJ52_13520 d4595208210370bc9a9d863a4432a346 226 SUPERFAMILY SSF52540 4 224 2.83E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13520 d4595208210370bc9a9d863a4432a346 226 Gene3D G3DSA:3.40.50.300 1 226 1.7E-75 T 11-10-2018 AYJ52_13520 d4595208210370bc9a9d863a4432a346 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 220 4.5E-71 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AYJ52_05920 8fca364638cc929322a98345cece473e 141 Pfam PF11162 Protein of unknown function (DUF2946) 16 138 1.7E-8 T 11-10-2018 IPR021333 Protein of unknown function DUF2946 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 1.9E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 180 202 1.9E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 1.9E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 1.9E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 141 167 1.9E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 1.9E-24 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 Gene3D G3DSA:3.90.380.10 157 249 3.1E-13 T 11-10-2018 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 Gene3D G3DSA:2.102.10.10 41 156 1.7E-36 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 181 369 1.1E-20 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 SUPERFAMILY SSF50022 18 156 4.19E-44 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 86 109 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 SUPERFAMILY SSF55961 161 368 1.02E-33 T 11-10-2018 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 Pfam PF00355 Rieske [2Fe-2S] domain 43 131 6.5E-19 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 Gene3D G3DSA:3.90.380.10 250 371 7.6E-6 T 11-10-2018 AYJ52_09650 1aee1400cab32e80d564e3f53f0871a4 371 Hamap MF_02097 Carnitine monooxygenase oxygenase subunit. 1 371 74.056 T 11-10-2018 IPR039004 Carnitine monooxygenase oxygenase subunit GO:0009437|GO:0051537 AYJ52_03200 361fca8c1ec468e2e6238df0c075aa18 186 Gene3D G3DSA:3.10.310.50 35 182 7.0E-42 T 11-10-2018 AYJ52_03200 361fca8c1ec468e2e6238df0c075aa18 186 Pfam PF04536 TPM domain 39 161 2.8E-16 T 11-10-2018 IPR007621 TPM domain AYJ52_01660 fda78d0b309dcbb621e77d96f3e3c12c 341 Pfam PF13505 Outer membrane protein beta-barrel domain 6 178 3.0E-15 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AYJ52_01660 fda78d0b309dcbb621e77d96f3e3c12c 341 SUPERFAMILY SSF56925 30 189 4.97E-20 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AYJ52_01660 fda78d0b309dcbb621e77d96f3e3c12c 341 PRINTS PR01021 OMPA domain signature 255 270 5.8E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_01660 fda78d0b309dcbb621e77d96f3e3c12c 341 PRINTS PR01021 OMPA domain signature 225 247 5.8E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_01660 fda78d0b309dcbb621e77d96f3e3c12c 341 PRINTS PR01021 OMPA domain signature 270 286 5.8E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_01660 fda78d0b309dcbb621e77d96f3e3c12c 341 Gene3D G3DSA:2.40.160.20 13 184 2.1E-19 T 11-10-2018 AYJ52_01660 fda78d0b309dcbb621e77d96f3e3c12c 341 Gene3D G3DSA:3.30.1330.60 209 330 3.8E-45 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_01660 fda78d0b309dcbb621e77d96f3e3c12c 341 Pfam PF00691 OmpA family 224 320 1.3E-23 T 11-10-2018 IPR006665 OmpA-like domain AYJ52_01660 fda78d0b309dcbb621e77d96f3e3c12c 341 SUPERFAMILY SSF103088 202 324 3.79E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_06800 60e1eaec41ef25b33bd0c8c494d9bcb5 699 Pfam PF04632 Fusaric acid resistance protein family 15 678 1.3E-146 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 AYJ52_02240 26325f7e629e15d3c32d2d8739089164 128 ProSitePatterns PS00360 Ribosomal protein S9 signature. 67 85 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AYJ52_02240 26325f7e629e15d3c32d2d8739089164 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 3.2E-44 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AYJ52_02240 26325f7e629e15d3c32d2d8739089164 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 31.005 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AYJ52_02240 26325f7e629e15d3c32d2d8739089164 128 SUPERFAMILY SSF54211 4 128 9.86E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_02240 26325f7e629e15d3c32d2d8739089164 128 Gene3D G3DSA:3.30.230.10 2 128 2.4E-50 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ52_19125 102de7d800e44049ff5b5fc8705319d3 913 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 138 180 5.5E-5 T 11-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain AYJ52_19125 102de7d800e44049ff5b5fc8705319d3 913 Gene3D G3DSA:3.40.50.300 350 585 5.2E-9 T 11-10-2018 AYJ52_19125 102de7d800e44049ff5b5fc8705319d3 913 Gene3D G3DSA:3.40.50.300 100 243 7.9E-9 T 11-10-2018 AYJ52_19125 102de7d800e44049ff5b5fc8705319d3 913 SUPERFAMILY SSF52540 112 574 8.64E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17600 9aea4e36642840632678f5f37d2b42ac 448 SUPERFAMILY SSF103473 13 433 4.05E-56 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_17600 9aea4e36642840632678f5f37d2b42ac 448 Gene3D G3DSA:1.20.1250.20 231 439 1.0E-30 T 11-10-2018 AYJ52_17600 9aea4e36642840632678f5f37d2b42ac 448 Gene3D G3DSA:1.20.1250.20 10 211 2.0E-40 T 11-10-2018 AYJ52_17600 9aea4e36642840632678f5f37d2b42ac 448 Pfam PF07690 Major Facilitator Superfamily 32 354 7.1E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_01330 6e17c4e55913cf19e3e8d4d2c8300805 682 Pfam PF05649 Peptidase family M13 50 426 6.9E-105 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AYJ52_01330 6e17c4e55913cf19e3e8d4d2c8300805 682 Gene3D G3DSA:1.10.1380.10 74 465 1.0E-244 T 11-10-2018 AYJ52_01330 6e17c4e55913cf19e3e8d4d2c8300805 682 SUPERFAMILY SSF55486 32 682 4.03E-216 T 11-10-2018 AYJ52_01330 6e17c4e55913cf19e3e8d4d2c8300805 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 509 525 1.8E-23 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AYJ52_01330 6e17c4e55913cf19e3e8d4d2c8300805 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 470 482 1.8E-23 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AYJ52_01330 6e17c4e55913cf19e3e8d4d2c8300805 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 580 591 1.8E-23 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AYJ52_01330 6e17c4e55913cf19e3e8d4d2c8300805 682 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 488 500 1.8E-23 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AYJ52_01330 6e17c4e55913cf19e3e8d4d2c8300805 682 Gene3D G3DSA:3.40.390.10 43 682 1.0E-244 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AYJ52_01330 6e17c4e55913cf19e3e8d4d2c8300805 682 Pfam PF01431 Peptidase family M13 478 679 8.4E-76 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AYJ52_14535 242a600b788e1ef3205916cd53e65042 322 SUPERFAMILY SSF64167 21 317 1.7E-40 T 11-10-2018 AYJ52_14535 242a600b788e1ef3205916cd53e65042 322 Gene3D G3DSA:3.40.1210.10 21 317 2.2E-43 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AYJ52_14535 242a600b788e1ef3205916cd53e65042 322 Pfam PF01975 Survival protein SurE 23 243 7.8E-37 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 SMART SM00388 224 290 1.9E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 SUPERFAMILY SSF55874 279 445 2.1E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 289 4.3E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 Gene3D G3DSA:3.30.450.20 107 222 4.7E-8 T 11-10-2018 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 Pfam PF11808 Domain of unknown function (DUF3329) 27 106 3.0E-14 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 SUPERFAMILY SSF47384 213 291 3.14E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 116 443 8.4E-124 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 Gene3D G3DSA:1.10.287.130 223 290 2.4E-22 T 11-10-2018 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 SUPERFAMILY SSF55785 125 169 1.1E-5 T 11-10-2018 IPR035965 PAS domain superfamily AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 SMART SM00387 335 447 6.7E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 Pfam PF13188 PAS domain 119 164 7.5E-6 T 11-10-2018 IPR000014 PAS domain AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 446 1.6E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AYJ52_04370 13e764225116f4817feae5efdf7f63ad 452 Gene3D G3DSA:3.30.565.10 292 449 1.3E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_16540 ca82d95c4249ae047666d52aea084589 182 Pfam PF10973 Protein of unknown function (DUF2799) 28 110 3.6E-18 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 AYJ52_01260 c2dcc2533ef92a550699c9f05da4a664 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 14 158 3.8E-22 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AYJ52_01260 c2dcc2533ef92a550699c9f05da4a664 163 Pfam PF04093 rod shape-determining protein MreD 16 155 9.8E-13 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AYJ52_14065 885add8e77b12f29cdfbd81836622683 305 Pfam PF00892 EamA-like transporter family 151 285 7.5E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_14065 885add8e77b12f29cdfbd81836622683 305 Pfam PF00892 EamA-like transporter family 3 134 2.0E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_14065 885add8e77b12f29cdfbd81836622683 305 SUPERFAMILY SSF103481 35 137 1.96E-15 T 11-10-2018 AYJ52_14065 885add8e77b12f29cdfbd81836622683 305 SUPERFAMILY SSF103481 189 285 3.4E-9 T 11-10-2018 AYJ52_09580 c9d02b4c02b01a978f31eb6752543691 387 SUPERFAMILY SSF48452 43 129 4.51E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_09580 c9d02b4c02b01a978f31eb6752543691 387 Gene3D G3DSA:1.25.40.10 40 261 3.1E-50 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_09580 c9d02b4c02b01a978f31eb6752543691 387 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 10 254 4.1E-76 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AYJ52_09580 c9d02b4c02b01a978f31eb6752543691 387 Pfam PF13525 Outer membrane lipoprotein 39 243 8.9E-60 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like AYJ52_09580 c9d02b4c02b01a978f31eb6752543691 387 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 7 252 35.636 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AYJ52_06510 e0bad6a7af979ff42d12ece6d5a13b46 89 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.2E-39 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AYJ52_06510 e0bad6a7af979ff42d12ece6d5a13b46 89 PIRSF PIRSF029827 1 89 2.9E-38 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AYJ52_06510 e0bad6a7af979ff42d12ece6d5a13b46 89 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 25.85 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AYJ52_06510 e0bad6a7af979ff42d12ece6d5a13b46 89 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 73 2.0E-34 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AYJ52_06510 e0bad6a7af979ff42d12ece6d5a13b46 89 Gene3D G3DSA:1.10.3880.10 1 89 2.3E-34 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AYJ52_06510 e0bad6a7af979ff42d12ece6d5a13b46 89 SUPERFAMILY SSF111148 1 88 9.16E-36 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AYJ52_02485 9f3628592289a5fda1eb142c04b23a68 197 Gene3D G3DSA:1.20.1440.100 15 87 2.7E-28 T 11-10-2018 AYJ52_02485 9f3628592289a5fda1eb142c04b23a68 197 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 192 9.9E-35 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AYJ52_02485 9f3628592289a5fda1eb142c04b23a68 197 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 1.9E-25 T 11-10-2018 AYJ52_02485 9f3628592289a5fda1eb142c04b23a68 197 Gene3D G3DSA:3.40.50.1000 3 188 2.7E-28 T 11-10-2018 IPR023214 HAD superfamily AYJ52_02485 9f3628592289a5fda1eb142c04b23a68 197 SUPERFAMILY SSF56784 2 187 1.52E-23 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_02485 9f3628592289a5fda1eb142c04b23a68 197 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 184 2.6E-28 T 11-10-2018 AYJ52_13325 94dbc0134b60ead84fb556fb6c2a07d0 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 320 2.2E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_13325 94dbc0134b60ead84fb556fb6c2a07d0 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 336 2.2E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AYJ52_13325 94dbc0134b60ead84fb556fb6c2a07d0 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 208 2.3E-23 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_13325 94dbc0134b60ead84fb556fb6c2a07d0 341 SMART SM00342 254 336 1.7E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_13325 94dbc0134b60ead84fb556fb6c2a07d0 341 Pfam PF12833 Helix-turn-helix domain 261 337 7.2E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_13325 94dbc0134b60ead84fb556fb6c2a07d0 341 Gene3D G3DSA:1.10.10.60 235 339 2.5E-27 T 11-10-2018 AYJ52_13325 94dbc0134b60ead84fb556fb6c2a07d0 341 SUPERFAMILY SSF46689 289 338 1.79E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_15570 31983c8d0993fb301c802bed50306709 210 Gene3D G3DSA:3.90.1680.10 1 209 3.1E-50 T 11-10-2018 IPR036590 SOS response associated peptidase-like AYJ52_15570 31983c8d0993fb301c802bed50306709 210 SUPERFAMILY SSF143081 20 201 1.44E-46 T 11-10-2018 IPR036590 SOS response associated peptidase-like AYJ52_15570 31983c8d0993fb301c802bed50306709 210 Pfam PF02586 SOS response associated peptidase (SRAP) 22 188 1.2E-21 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) AYJ52_05330 4c64d23bdf6207967e9f3a14164a0402 257 SUPERFAMILY SSF53448 3 223 1.43E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_05330 4c64d23bdf6207967e9f3a14164a0402 257 Pfam PF00535 Glycosyl transferase family 2 5 119 4.5E-36 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AYJ52_05330 4c64d23bdf6207967e9f3a14164a0402 257 Gene3D G3DSA:3.90.550.10 1 237 2.6E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_08895 2dc6560eee1e3507691ab3aeb7e7e2b8 440 Pfam PF07690 Major Facilitator Superfamily 39 301 1.4E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_08895 2dc6560eee1e3507691ab3aeb7e7e2b8 440 Gene3D G3DSA:1.20.1250.20 28 227 1.5E-39 T 11-10-2018 AYJ52_08895 2dc6560eee1e3507691ab3aeb7e7e2b8 440 Gene3D G3DSA:1.20.1250.20 242 436 7.9E-33 T 11-10-2018 AYJ52_08895 2dc6560eee1e3507691ab3aeb7e7e2b8 440 SUPERFAMILY SSF103473 29 432 5.49E-82 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_11595 54114293a692eecb0a709a192965d277 148 Pfam PF01638 HxlR-like helix-turn-helix 20 105 1.5E-20 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AYJ52_11595 54114293a692eecb0a709a192965d277 148 SUPERFAMILY SSF46785 8 144 4.36E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_11595 54114293a692eecb0a709a192965d277 148 Gene3D G3DSA:1.10.10.10 4 148 1.2E-40 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_16660 b003eb6265626c2eb7fb115b3c85dead 187 SUPERFAMILY SSF51905 22 186 1.32E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_16660 b003eb6265626c2eb7fb115b3c85dead 187 Gene3D G3DSA:3.50.50.60 17 186 3.0E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_03105 b414da5101ec85d1dd26e9af9eb9a743 182 SUPERFAMILY SSF50346 104 179 3.53E-18 T 11-10-2018 IPR011033 PRC-barrel-like superfamily AYJ52_03105 b414da5101ec85d1dd26e9af9eb9a743 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 182 22.769 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AYJ52_03105 b414da5101ec85d1dd26e9af9eb9a743 182 Pfam PF05239 PRC-barrel domain 102 177 2.8E-7 T 11-10-2018 IPR027275 PRC-barrel domain AYJ52_03105 b414da5101ec85d1dd26e9af9eb9a743 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 12 179 1.7E-45 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AYJ52_03105 b414da5101ec85d1dd26e9af9eb9a743 182 SUPERFAMILY SSF50447 10 98 3.32E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AYJ52_03105 b414da5101ec85d1dd26e9af9eb9a743 182 Gene3D G3DSA:2.40.30.60 1 98 1.5E-36 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 AYJ52_03105 b414da5101ec85d1dd26e9af9eb9a743 182 Gene3D G3DSA:2.30.30.240 99 182 7.2E-33 T 11-10-2018 AYJ52_03105 b414da5101ec85d1dd26e9af9eb9a743 182 Pfam PF01782 RimM N-terminal domain 13 95 2.2E-23 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 AYJ52_18735 09f59e8876066aa9fd417b2cd280ff6d 189 Gene3D G3DSA:3.40.33.10 15 187 1.0E-35 T 11-10-2018 IPR035940 CAP superfamily AYJ52_18735 09f59e8876066aa9fd417b2cd280ff6d 189 SUPERFAMILY SSF55797 51 187 9.42E-18 T 11-10-2018 IPR035940 CAP superfamily AYJ52_18735 09f59e8876066aa9fd417b2cd280ff6d 189 Pfam PF00188 Cysteine-rich secretory protein family 62 186 2.0E-13 T 11-10-2018 IPR014044 CAP domain AYJ52_09170 e9029f540d8ce3c53a92ce8fa3fc66e3 180 SUPERFAMILY SSF54862 40 157 3.64E-27 T 11-10-2018 AYJ52_09170 e9029f540d8ce3c53a92ce8fa3fc66e3 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 5 152 27.116 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09170 e9029f540d8ce3c53a92ce8fa3fc66e3 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 15 137 4.4E-47 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09170 e9029f540d8ce3c53a92ce8fa3fc66e3 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.8E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AYJ52_09170 e9029f540d8ce3c53a92ce8fa3fc66e3 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ52_09170 e9029f540d8ce3c53a92ce8fa3fc66e3 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ52_09170 e9029f540d8ce3c53a92ce8fa3fc66e3 180 Gene3D G3DSA:3.30.70.3270 31 174 2.3E-40 T 11-10-2018 AYJ52_11245 7ac21533bee71eaf18909a26021f6f68 411 Gene3D G3DSA:3.20.20.140 53 363 4.4E-83 T 11-10-2018 AYJ52_11245 7ac21533bee71eaf18909a26021f6f68 411 SUPERFAMILY SSF51338 5 411 4.73E-12 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_11245 7ac21533bee71eaf18909a26021f6f68 411 SUPERFAMILY SSF51556 53 363 4.86E-71 T 11-10-2018 IPR032466 Metal-dependent hydrolase AYJ52_11245 7ac21533bee71eaf18909a26021f6f68 411 Gene3D G3DSA:2.30.40.10 10 410 4.4E-83 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AYJ52_04365 425954f2d33ed14be4dd2527293011a0 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 2.5E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_04365 425954f2d33ed14be4dd2527293011a0 236 SUPERFAMILY SSF52172 5 130 5.27E-40 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_04365 425954f2d33ed14be4dd2527293011a0 236 Gene3D G3DSA:1.10.10.10 132 231 9.0E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_04365 425954f2d33ed14be4dd2527293011a0 236 SMART SM00862 152 227 6.3E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AYJ52_04365 425954f2d33ed14be4dd2527293011a0 236 SMART SM00448 4 118 3.7E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_04365 425954f2d33ed14be4dd2527293011a0 236 Pfam PF00072 Response regulator receiver domain 6 119 4.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_04365 425954f2d33ed14be4dd2527293011a0 236 Gene3D G3DSA:3.40.50.2300 2 131 2.5E-36 T 11-10-2018 AYJ52_04365 425954f2d33ed14be4dd2527293011a0 236 SUPERFAMILY SSF46894 130 228 5.1E-29 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AYJ52_04365 425954f2d33ed14be4dd2527293011a0 236 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 228 2.5E-101 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AYJ52_14215 925aa6aec75006595ba5e0c5d5b7af56 176 SMART SM00903 24 167 3.1E-57 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AYJ52_14215 925aa6aec75006595ba5e0c5d5b7af56 176 Pfam PF01613 Flavin reductase like domain 25 166 3.2E-33 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AYJ52_14215 925aa6aec75006595ba5e0c5d5b7af56 176 SUPERFAMILY SSF50475 16 171 1.67E-46 T 11-10-2018 AYJ52_14215 925aa6aec75006595ba5e0c5d5b7af56 176 Gene3D G3DSA:2.30.110.10 3 173 2.6E-46 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AYJ52_11520 f3a572577f6a7a09dd852f4d8d5af6f4 255 SUPERFAMILY SSF53335 33 250 1.1E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_11520 f3a572577f6a7a09dd852f4d8d5af6f4 255 Pfam PF08241 Methyltransferase domain 47 143 1.9E-23 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AYJ52_11520 f3a572577f6a7a09dd852f4d8d5af6f4 255 Gene3D G3DSA:3.40.50.150 24 245 1.1E-53 T 11-10-2018 AYJ52_03275 ee77ea89d7b94db7838b04f42c48b5f3 268 Gene3D G3DSA:3.40.50.150 1 264 9.8E-74 T 11-10-2018 AYJ52_03275 ee77ea89d7b94db7838b04f42c48b5f3 268 Pfam PF08241 Methyltransferase domain 84 168 6.4E-13 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AYJ52_03275 ee77ea89d7b94db7838b04f42c48b5f3 268 SUPERFAMILY SSF53335 2 245 3.0E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_03275 ee77ea89d7b94db7838b04f42c48b5f3 268 PIRSF PIRSF018249 1 263 5.1E-89 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 Gene3D G3DSA:3.40.50.720 2 245 1.6E-53 T 11-10-2018 AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.6E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.6E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.6E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 Pfam PF00106 short chain dehydrogenase 3 193 1.2E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.3E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.3E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.3E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.3E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.3E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_15105 3f17001ad2e9a8688ffb23264966e34f 247 SUPERFAMILY SSF51735 3 218 5.2E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_13840 747420fe1f3151d5d60b7109fc758097 518 Pfam PF03929 PepSY-associated TM region 10 358 4.2E-57 T 11-10-2018 IPR005625 PepSY-associated TM protein AYJ52_07085 74b788829a891fd5e3a0eafe67e93b7c 519 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 73 458 4.0E-94 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AYJ52_07085 74b788829a891fd5e3a0eafe67e93b7c 519 Pfam PF00795 Carbon-nitrogen hydrolase 228 476 5.1E-30 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AYJ52_07085 74b788829a891fd5e3a0eafe67e93b7c 519 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 20 496 22.393 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AYJ52_07085 74b788829a891fd5e3a0eafe67e93b7c 519 Gene3D G3DSA:3.60.110.10 224 481 3.2E-13 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AYJ52_07085 74b788829a891fd5e3a0eafe67e93b7c 519 SUPERFAMILY SSF56317 224 489 1.57E-44 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AYJ52_01965 06b02896d08423752b3ff8d518d74d65 342 Pfam PF06258 Mitochondrial fission ELM1 19 324 8.7E-39 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like AYJ52_12000 9f5e812a6faf030705fb6a68a66ac51c 314 Gene3D G3DSA:1.10.3720.10 113 306 2.4E-26 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_12000 9f5e812a6faf030705fb6a68a66ac51c 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 137 299 1.0E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_12000 9f5e812a6faf030705fb6a68a66ac51c 314 SUPERFAMILY SSF161098 113 299 3.53E-31 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_17175 8a0ff6ae7a15a51c08278e939e88fc88 478 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 476 34.22 T 11-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AYJ52_17175 8a0ff6ae7a15a51c08278e939e88fc88 478 SUPERFAMILY SSF48452 299 456 3.48E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_17175 8a0ff6ae7a15a51c08278e939e88fc88 478 Pfam PF01435 Peptidase family M48 77 256 7.3E-32 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AYJ52_17175 8a0ff6ae7a15a51c08278e939e88fc88 478 Gene3D G3DSA:3.30.2010.10 68 147 7.6E-7 T 11-10-2018 AYJ52_17175 8a0ff6ae7a15a51c08278e939e88fc88 478 Gene3D G3DSA:1.25.40.10 266 476 1.8E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_09790 d12ded73a7b205820982f4fdb2b85581 217 SUPERFAMILY SSF103088 101 213 4.05E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_09790 d12ded73a7b205820982f4fdb2b85581 217 Gene3D G3DSA:3.30.1330.60 75 217 2.0E-47 T 11-10-2018 IPR036737 OmpA-like domain superfamily AYJ52_09790 d12ded73a7b205820982f4fdb2b85581 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 158 175 5.1E-11 T 11-10-2018 AYJ52_09790 d12ded73a7b205820982f4fdb2b85581 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 176 195 5.1E-11 T 11-10-2018 AYJ52_09790 d12ded73a7b205820982f4fdb2b85581 217 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 196 216 5.1E-11 T 11-10-2018 AYJ52_09790 d12ded73a7b205820982f4fdb2b85581 217 Pfam PF00691 OmpA family 112 207 7.3E-25 T 11-10-2018 IPR006665 OmpA-like domain AYJ52_09790 d12ded73a7b205820982f4fdb2b85581 217 ProSitePatterns PS01068 OmpA-like domain. 145 189 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AYJ52_09790 d12ded73a7b205820982f4fdb2b85581 217 PRINTS PR01021 OMPA domain signature 113 135 3.8E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_09790 d12ded73a7b205820982f4fdb2b85581 217 PRINTS PR01021 OMPA domain signature 158 174 3.8E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_09790 d12ded73a7b205820982f4fdb2b85581 217 PRINTS PR01021 OMPA domain signature 143 158 3.8E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AYJ52_07790 b2a4b1a4dbb537b55995a233909e2b1f 246 SUPERFAMILY SSF53448 5 232 4.66E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_07790 b2a4b1a4dbb537b55995a233909e2b1f 246 Gene3D G3DSA:3.90.550.10 5 238 2.3E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_07790 b2a4b1a4dbb537b55995a233909e2b1f 246 Pfam PF00535 Glycosyl transferase family 2 8 123 6.3E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AYJ52_01680 0c66db9bcd7e31d1745735cfd85caff9 117 Pfam PF00893 Small Multidrug Resistance protein 13 102 1.3E-11 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AYJ52_01680 0c66db9bcd7e31d1745735cfd85caff9 117 SUPERFAMILY SSF103481 13 113 2.22E-13 T 11-10-2018 AYJ52_01680 0c66db9bcd7e31d1745735cfd85caff9 117 Gene3D G3DSA:1.10.3730.20 12 115 4.9E-16 T 11-10-2018 AYJ52_10235 a35679b46953e906ea7cf33332de5eb9 160 Gene3D G3DSA:3.90.45.10 1 160 1.4E-53 T 11-10-2018 IPR036821 Peptide deformylase superfamily AYJ52_10235 a35679b46953e906ea7cf33332de5eb9 160 SUPERFAMILY SSF56420 4 160 2.36E-52 T 11-10-2018 IPR036821 Peptide deformylase superfamily AYJ52_10235 a35679b46953e906ea7cf33332de5eb9 160 PRINTS PR01576 Peptide deformylase signature 132 160 2.2E-31 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_10235 a35679b46953e906ea7cf33332de5eb9 160 PRINTS PR01576 Peptide deformylase signature 37 66 2.2E-31 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_10235 a35679b46953e906ea7cf33332de5eb9 160 PRINTS PR01576 Peptide deformylase signature 113 131 2.2E-31 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_10235 a35679b46953e906ea7cf33332de5eb9 160 PRINTS PR01576 Peptide deformylase signature 101 112 2.2E-31 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_10235 a35679b46953e906ea7cf33332de5eb9 160 PIRSF PIRSF004749 1 160 1.8E-46 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_10235 a35679b46953e906ea7cf33332de5eb9 160 Hamap MF_00163 Peptide deformylase [def]. 3 160 24.267 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_10235 a35679b46953e906ea7cf33332de5eb9 160 Pfam PF01327 Polypeptide deformylase 6 160 4.6E-44 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_10235 a35679b46953e906ea7cf33332de5eb9 160 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 9 160 1.5E-41 T 11-10-2018 IPR023635 Peptide deformylase AYJ52_14945 19c74e34836f1fe65c4fd05802e91c67 276 Pfam PF00561 alpha/beta hydrolase fold 24 256 1.4E-25 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_14945 19c74e34836f1fe65c4fd05802e91c67 276 SUPERFAMILY SSF53474 1 276 2.89E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_14945 19c74e34836f1fe65c4fd05802e91c67 276 Gene3D G3DSA:3.40.50.1820 1 275 2.0E-89 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_14945 19c74e34836f1fe65c4fd05802e91c67 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 1.1E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_14945 19c74e34836f1fe65c4fd05802e91c67 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.1E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_14945 19c74e34836f1fe65c4fd05802e91c67 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.1E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_08415 e160e93ed3f602673c914485491b57eb 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AYJ52_08415 e160e93ed3f602673c914485491b57eb 262 Gene3D G3DSA:3.90.226.10 2 248 3.5E-64 T 11-10-2018 AYJ52_08415 e160e93ed3f602673c914485491b57eb 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 220 5.1E-41 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_08415 e160e93ed3f602673c914485491b57eb 262 SUPERFAMILY SSF52096 3 243 4.36E-64 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_02560 b387fea07dd766aa039cc15d7a87a528 125 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02560 b387fea07dd766aa039cc15d7a87a528 125 Gene3D G3DSA:3.90.1030.10 1 117 4.5E-46 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02560 b387fea07dd766aa039cc15d7a87a528 125 SUPERFAMILY SSF64263 1 119 3.14E-49 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02560 b387fea07dd766aa039cc15d7a87a528 125 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 2.4E-45 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02560 b387fea07dd766aa039cc15d7a87a528 125 Pfam PF01196 Ribosomal protein L17 20 116 3.2E-33 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_02560 b387fea07dd766aa039cc15d7a87a528 125 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.328 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_08215 06fc7324f2875ffd105a14cfaed5a9d2 90 Pfam PF11112 Pyocin activator protein PrtN 8 81 2.7E-19 T 11-10-2018 IPR020518 Transcription regulator PrtN GO:0006355 AYJ52_08910 ffa152cbf762ceb817c418b01b4cd7e9 182 SUPERFAMILY SSF48498 74 165 1.91E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_08910 ffa152cbf762ceb817c418b01b4cd7e9 182 SUPERFAMILY SSF46689 7 74 2.05E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_08910 ffa152cbf762ceb817c418b01b4cd7e9 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 1.9E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_08910 ffa152cbf762ceb817c418b01b4cd7e9 182 Gene3D G3DSA:1.10.357.10 2 179 9.8E-32 T 11-10-2018 AYJ52_08910 ffa152cbf762ceb817c418b01b4cd7e9 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 5.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_08910 ffa152cbf762ceb817c418b01b4cd7e9 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 5.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_04860 dcecee27908994955d9431e5bd61e141 280 Gene3D G3DSA:3.40.50.1820 10 275 1.3E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04860 dcecee27908994955d9431e5bd61e141 280 PRINTS PR00412 Epoxide hydrolase signature 99 112 1.4E-11 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_04860 dcecee27908994955d9431e5bd61e141 280 PRINTS PR00412 Epoxide hydrolase signature 254 276 1.4E-11 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_04860 dcecee27908994955d9431e5bd61e141 280 PRINTS PR00412 Epoxide hydrolase signature 34 52 1.4E-11 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_04860 dcecee27908994955d9431e5bd61e141 280 PRINTS PR00412 Epoxide hydrolase signature 221 237 1.4E-11 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_04860 dcecee27908994955d9431e5bd61e141 280 PRINTS PR00412 Epoxide hydrolase signature 54 69 1.4E-11 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AYJ52_04860 dcecee27908994955d9431e5bd61e141 280 SUPERFAMILY SSF53474 16 277 5.73E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04860 dcecee27908994955d9431e5bd61e141 280 Pfam PF00561 alpha/beta hydrolase fold 28 265 1.8E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_04460 360c479f671b2639696b1b6ea3bf77b9 171 Pfam PF04608 Phosphatidylglycerophosphatase A 25 167 1.1E-46 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AYJ52_04460 360c479f671b2639696b1b6ea3bf77b9 171 SUPERFAMILY SSF101307 18 168 1.57E-41 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 AYJ52_04460 360c479f671b2639696b1b6ea3bf77b9 171 PIRSF PIRSF006162 14 171 4.5E-49 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AYJ52_00310 2b5e8dd299fbb489a05f1b698f345964 286 Pfam PF01464 Transglycosylase SLT domain 93 198 8.8E-31 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AYJ52_00310 2b5e8dd299fbb489a05f1b698f345964 286 Gene3D G3DSA:1.10.530.10 49 215 4.6E-51 T 11-10-2018 AYJ52_00310 2b5e8dd299fbb489a05f1b698f345964 286 SUPERFAMILY SSF53955 87 211 2.79E-49 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_06190 7469dbfc93a9c30271ac73cec76e441b 226 Gene3D G3DSA:1.20.1260.10 75 168 2.4E-21 T 11-10-2018 IPR012347 Ferritin-like AYJ52_06190 7469dbfc93a9c30271ac73cec76e441b 226 Gene3D G3DSA:1.20.1260.10 169 226 1.4E-21 T 11-10-2018 IPR012347 Ferritin-like AYJ52_06190 7469dbfc93a9c30271ac73cec76e441b 226 Pfam PF03713 Domain of unknown function (DUF305) 78 222 1.9E-41 T 11-10-2018 IPR005183 Domain of unknown function DUF305 AYJ52_10345 7212584165dc70be883879075eeba5d6 341 SUPERFAMILY SSF53474 55 327 1.47E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10345 7212584165dc70be883879075eeba5d6 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 120 4.6E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10345 7212584165dc70be883879075eeba5d6 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 272 286 4.6E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10345 7212584165dc70be883879075eeba5d6 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 165 178 4.6E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10345 7212584165dc70be883879075eeba5d6 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 151 164 4.6E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_10345 7212584165dc70be883879075eeba5d6 341 Gene3D G3DSA:3.40.50.1820 36 341 5.6E-99 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_10345 7212584165dc70be883879075eeba5d6 341 Pfam PF12697 Alpha/beta hydrolase family 82 319 6.2E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 8.7E-235 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 Gene3D G3DSA:3.30.499.10 333 472 9.0E-50 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 4.9E-161 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 472 59.241 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 PRINTS PR00415 Aconitase family signature 88 101 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 PRINTS PR00415 Aconitase family signature 349 360 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 PRINTS PR00415 Aconitase family signature 139 154 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 PRINTS PR00415 Aconitase family signature 201 214 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 PRINTS PR00415 Aconitase family signature 215 228 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 PRINTS PR00415 Aconitase family signature 114 122 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 PRINTS PR00415 Aconitase family signature 292 306 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 PRINTS PR00415 Aconitase family signature 406 419 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 PRINTS PR00415 Aconitase family signature 125 138 2.6E-46 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 Gene3D G3DSA:3.30.499.20 5 292 2.3E-96 T 11-10-2018 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 SUPERFAMILY SSF53732 2 471 6.93E-166 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AYJ52_07305 c34bf6afe60435fdeac24cec1b708b3f 472 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 Pfam PF00210 Ferritin-like domain 8 141 1.9E-33 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 PRINTS PR00601 Bacterioferritin signature 128 149 4.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 PRINTS PR00601 Bacterioferritin signature 23 43 4.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 PRINTS PR00601 Bacterioferritin signature 3 22 4.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 PRINTS PR00601 Bacterioferritin signature 107 127 4.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 PRINTS PR00601 Bacterioferritin signature 44 64 4.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 PRINTS PR00601 Bacterioferritin signature 65 85 4.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 PRINTS PR00601 Bacterioferritin signature 86 106 4.6E-57 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 PIRSF PIRSF002560 1 154 3.4E-62 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 1.1E-62 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 SUPERFAMILY SSF47240 1 154 1.18E-44 T 11-10-2018 IPR009078 Ferritin-like superfamily AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AYJ52_03180 9b13d335d6cf92929219bac5afa226d7 154 Gene3D G3DSA:1.20.1260.10 1 154 5.4E-58 T 11-10-2018 IPR012347 Ferritin-like AYJ52_09835 56579b46e0308c733b6de4303fa7e08e 104 Gene3D G3DSA:3.10.20.280 1 87 2.5E-25 T 11-10-2018 IPR037021 RnfH superfamily AYJ52_09835 56579b46e0308c733b6de4303fa7e08e 104 Pfam PF03658 RnfH family Ubiquitin 6 85 5.2E-24 T 11-10-2018 IPR005346 RnfH protein AYJ52_09835 56579b46e0308c733b6de4303fa7e08e 104 SUPERFAMILY SSF54285 6 77 2.35E-18 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AYJ52_09835 56579b46e0308c733b6de4303fa7e08e 104 Hamap MF_00460 Protein RnfH [rnfH]. 5 93 20.812 T 11-10-2018 IPR005346 RnfH protein AYJ52_07785 631a589ff16eb8ff47ece80586139ef2 552 ProSitePatterns PS00455 Putative AMP-binding domain signature. 120 131 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_07785 631a589ff16eb8ff47ece80586139ef2 552 Gene3D G3DSA:3.10.129.10 436 551 1.9E-21 T 11-10-2018 AYJ52_07785 631a589ff16eb8ff47ece80586139ef2 552 Gene3D G3DSA:3.30.300.30 325 435 1.6E-14 T 11-10-2018 AYJ52_07785 631a589ff16eb8ff47ece80586139ef2 552 Pfam PF13193 AMP-binding enzyme C-terminal domain 341 423 1.0E-5 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_07785 631a589ff16eb8ff47ece80586139ef2 552 SUPERFAMILY SSF56801 19 438 1.31E-45 T 11-10-2018 AYJ52_07785 631a589ff16eb8ff47ece80586139ef2 552 Gene3D G3DSA:3.40.50.12780 6 317 7.5E-20 T 11-10-2018 AYJ52_07785 631a589ff16eb8ff47ece80586139ef2 552 SUPERFAMILY SSF54637 446 545 1.86E-9 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_07785 631a589ff16eb8ff47ece80586139ef2 552 Pfam PF00501 AMP-binding enzyme 119 281 1.2E-10 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_17640 8a0813aed454083de9baba8d3ca5afdb 278 Pfam PF02219 Methylenetetrahydrofolate reductase 3 274 7.4E-81 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AYJ52_17640 8a0813aed454083de9baba8d3ca5afdb 278 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 7 273 6.1E-94 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AYJ52_17640 8a0813aed454083de9baba8d3ca5afdb 278 Gene3D G3DSA:3.20.20.220 1 278 1.8E-92 T 11-10-2018 AYJ52_17640 8a0813aed454083de9baba8d3ca5afdb 278 SUPERFAMILY SSF51730 3 276 5.69E-88 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AYJ52_13140 40bcfe1fde3725aa8d444b27879ecf4c 309 Pfam PF00892 EamA-like transporter family 156 289 5.2E-24 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_13140 40bcfe1fde3725aa8d444b27879ecf4c 309 Pfam PF00892 EamA-like transporter family 10 141 3.6E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_13140 40bcfe1fde3725aa8d444b27879ecf4c 309 SUPERFAMILY SSF103481 217 289 3.14E-11 T 11-10-2018 AYJ52_13140 40bcfe1fde3725aa8d444b27879ecf4c 309 SUPERFAMILY SSF103481 42 144 1.31E-13 T 11-10-2018 AYJ52_12895 e71aed4bd0b554d3b67e66cac289c97e 312 Gene3D G3DSA:1.25.40.10 101 293 2.7E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_12895 e71aed4bd0b554d3b67e66cac289c97e 312 SUPERFAMILY SSF48452 193 291 3.88E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_15185 461c215be7fce36103362c1f098e6270 209 Pfam PF00775 Dioxygenase 42 199 6.2E-20 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AYJ52_15185 461c215be7fce36103362c1f098e6270 209 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 12 209 1.3E-85 T 11-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 AYJ52_15185 461c215be7fce36103362c1f098e6270 209 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 55 83 - T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AYJ52_15185 461c215be7fce36103362c1f098e6270 209 SUPERFAMILY SSF49482 9 209 1.96E-62 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AYJ52_15185 461c215be7fce36103362c1f098e6270 209 Gene3D G3DSA:2.60.130.10 1 209 3.3E-86 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AYJ52_00290 e3491a6cff5f166ca43bb4566f34ffae 370 Gene3D G3DSA:3.40.190.10 40 185 5.9E-14 T 11-10-2018 AYJ52_00290 e3491a6cff5f166ca43bb4566f34ffae 370 Pfam PF01464 Transglycosylase SLT domain 213 322 3.2E-21 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AYJ52_00290 e3491a6cff5f166ca43bb4566f34ffae 370 SUPERFAMILY SSF53955 167 361 4.64E-32 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_00290 e3491a6cff5f166ca43bb4566f34ffae 370 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 230 258 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AYJ52_00290 e3491a6cff5f166ca43bb4566f34ffae 370 Gene3D G3DSA:1.10.530.10 207 369 2.6E-34 T 11-10-2018 AYJ52_00290 e3491a6cff5f166ca43bb4566f34ffae 370 SUPERFAMILY SSF53850 52 118 2.35E-7 T 11-10-2018 AYJ52_06830 5b3c11b376de1480979d47f686a3a69f 436 SMART SM00028 64 97 0.26 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_06830 5b3c11b376de1480979d47f686a3a69f 436 SMART SM00028 30 63 62.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_06830 5b3c11b376de1480979d47f686a3a69f 436 Pfam PF14559 Tetratricopeptide repeat 41 85 2.9E-6 T 11-10-2018 AYJ52_06830 5b3c11b376de1480979d47f686a3a69f 436 Gene3D G3DSA:1.25.40.10 14 151 5.4E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_06830 5b3c11b376de1480979d47f686a3a69f 436 SUPERFAMILY SSF48452 33 129 1.14E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_11590 92ec4cd86deb143c9acbff64da528d11 421 SUPERFAMILY SSF103473 15 408 6.15E-49 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_11590 92ec4cd86deb143c9acbff64da528d11 421 Gene3D G3DSA:1.20.1250.20 19 402 6.8E-36 T 11-10-2018 AYJ52_11590 92ec4cd86deb143c9acbff64da528d11 421 Pfam PF07690 Major Facilitator Superfamily 31 278 1.1E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_12295 0eeedbea117c3b720f495b99a6d6a56b 395 SUPERFAMILY SSF53383 26 385 7.52E-89 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AYJ52_12295 0eeedbea117c3b720f495b99a6d6a56b 395 PIRSF PIRSF000524 21 394 2.0E-59 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AYJ52_12295 0eeedbea117c3b720f495b99a6d6a56b 395 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 25 385 2.0E-174 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AYJ52_12295 0eeedbea117c3b720f495b99a6d6a56b 395 Gene3D G3DSA:3.90.1150.10 31 375 8.2E-113 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AYJ52_12295 0eeedbea117c3b720f495b99a6d6a56b 395 Pfam PF00266 Aminotransferase class-V 54 337 8.3E-33 T 11-10-2018 IPR000192 Aminotransferase class V domain AYJ52_12295 0eeedbea117c3b720f495b99a6d6a56b 395 Gene3D G3DSA:3.40.640.10 39 284 8.2E-113 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AYJ52_12295 0eeedbea117c3b720f495b99a6d6a56b 395 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 29 383 5.1E-149 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AYJ52_12295 0eeedbea117c3b720f495b99a6d6a56b 395 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 394 183.891 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AYJ52_03015 ef2e3c2a0b216b1af1255ca9ce96cf9d 191 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 179 190 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AYJ52_03015 ef2e3c2a0b216b1af1255ca9ce96cf9d 191 Gene3D G3DSA:2.60.40.200 40 191 9.3E-50 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AYJ52_03015 ef2e3c2a0b216b1af1255ca9ce96cf9d 191 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 55 190 5.8E-32 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AYJ52_03015 ef2e3c2a0b216b1af1255ca9ce96cf9d 191 SUPERFAMILY SSF49329 46 191 4.19E-44 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AYJ52_11610 63b8a3233874dd4e7d4d42c6b313f534 197 Pfam PF13628 Domain of unknown function (DUF4142) 52 192 1.2E-22 T 11-10-2018 IPR025419 Domain of unknown function DUF4142 AYJ52_14190 a16adc7f15e190e0479a7b4bda40cf75 447 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_14190 a16adc7f15e190e0479a7b4bda40cf75 447 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 93 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_14190 a16adc7f15e190e0479a7b4bda40cf75 447 Gene3D G3DSA:1.20.1250.20 247 444 2.7E-23 T 11-10-2018 AYJ52_14190 a16adc7f15e190e0479a7b4bda40cf75 447 Pfam PF07690 Major Facilitator Superfamily 27 334 5.7E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_14190 a16adc7f15e190e0479a7b4bda40cf75 447 Gene3D G3DSA:1.20.1250.20 11 226 4.8E-46 T 11-10-2018 AYJ52_14190 a16adc7f15e190e0479a7b4bda40cf75 447 SUPERFAMILY SSF103473 9 430 1.7E-79 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_09270 b93ce5986b54173da63e882bc6be8fec 111 Gene3D G3DSA:1.10.238.10 28 101 3.5E-8 T 11-10-2018 AYJ52_09270 b93ce5986b54173da63e882bc6be8fec 111 ProSitePatterns PS00018 EF-hand calcium-binding domain. 82 94 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AYJ52_09270 b93ce5986b54173da63e882bc6be8fec 111 SUPERFAMILY SSF47473 26 99 6.45E-8 T 11-10-2018 IPR011992 EF-hand domain pair AYJ52_11510 1902f9c5f60633a2479857bc67d341bc 161 Gene3D G3DSA:1.10.10.10 2 61 1.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_11510 1902f9c5f60633a2479857bc67d341bc 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 55 7.2E-18 T 11-10-2018 AYJ52_11510 1902f9c5f60633a2479857bc67d341bc 161 SUPERFAMILY SSF46785 6 67 5.4E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_11510 1902f9c5f60633a2479857bc67d341bc 161 Pfam PF01037 Lrp/AsnC ligand binding domain 74 147 1.5E-27 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ52_11510 1902f9c5f60633a2479857bc67d341bc 161 Gene3D G3DSA:3.30.70.920 62 145 1.3E-27 T 11-10-2018 AYJ52_11510 1902f9c5f60633a2479857bc67d341bc 161 SUPERFAMILY SSF54909 72 152 1.61E-22 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_11510 1902f9c5f60633a2479857bc67d341bc 161 SMART SM00344 8 117 4.6E-45 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_11510 1902f9c5f60633a2479857bc67d341bc 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.8E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_11510 1902f9c5f60633a2479857bc67d341bc 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.8E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_11510 1902f9c5f60633a2479857bc67d341bc 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.8E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_07860 897f55ebc741f096487cd562224c2160 152 Gene3D G3DSA:3.10.420.10 1 152 6.3E-51 T 11-10-2018 IPR035958 SecB-like superfamily AYJ52_07860 897f55ebc741f096487cd562224c2160 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 96 118 1.1E-31 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AYJ52_07860 897f55ebc741f096487cd562224c2160 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 1.1E-31 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AYJ52_07860 897f55ebc741f096487cd562224c2160 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 122 140 1.1E-31 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AYJ52_07860 897f55ebc741f096487cd562224c2160 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 72 92 1.1E-31 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AYJ52_07860 897f55ebc741f096487cd562224c2160 152 SUPERFAMILY SSF54611 2 141 3.92E-46 T 11-10-2018 IPR035958 SecB-like superfamily AYJ52_07860 897f55ebc741f096487cd562224c2160 152 Pfam PF02556 Preprotein translocase subunit SecB 5 142 2.5E-49 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AYJ52_07860 897f55ebc741f096487cd562224c2160 152 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 6 141 3.0E-46 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AYJ52_07860 897f55ebc741f096487cd562224c2160 152 Hamap MF_00821 Protein-export protein SecB [secB]. 1 144 30.945 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AYJ52_13180 4d5b62800c40fe6fc89b718e78fffd07 190 Gene3D G3DSA:2.60.40.1090 33 190 2.7E-37 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AYJ52_13180 4d5b62800c40fe6fc89b718e78fffd07 190 Pfam PF16970 Type-1 fimbrial protein, A 61 190 1.5E-24 T 11-10-2018 IPR039458 Type-1 fimbrial protein, A AYJ52_13180 4d5b62800c40fe6fc89b718e78fffd07 190 SUPERFAMILY SSF49401 43 190 9.94E-30 T 11-10-2018 IPR008966 Adhesion domain superfamily AYJ52_16125 3c40b89b5b6e2ae76881d149c14a552a 157 Pfam PF01037 Lrp/AsnC ligand binding domain 74 148 8.7E-22 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ52_16125 3c40b89b5b6e2ae76881d149c14a552a 157 Gene3D G3DSA:1.10.10.10 1 61 6.1E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_16125 3c40b89b5b6e2ae76881d149c14a552a 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 48 3.2E-13 T 11-10-2018 AYJ52_16125 3c40b89b5b6e2ae76881d149c14a552a 157 SUPERFAMILY SSF54909 70 155 1.34E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_16125 3c40b89b5b6e2ae76881d149c14a552a 157 SUPERFAMILY SSF46785 5 97 3.98E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_16125 3c40b89b5b6e2ae76881d149c14a552a 157 Gene3D G3DSA:3.30.70.920 62 145 2.3E-22 T 11-10-2018 AYJ52_16125 3c40b89b5b6e2ae76881d149c14a552a 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.0E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_16125 3c40b89b5b6e2ae76881d149c14a552a 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.0E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_16125 3c40b89b5b6e2ae76881d149c14a552a 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.0E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AYJ52_16125 3c40b89b5b6e2ae76881d149c14a552a 157 SMART SM00344 1 117 9.9E-25 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AYJ52_03795 505dfd80afab6bc4db353216d3612f46 608 Pfam PF03235 Protein of unknown function DUF262 14 230 1.7E-38 T 11-10-2018 IPR004919 Domain of unknown function DUF262 AYJ52_03795 505dfd80afab6bc4db353216d3612f46 608 Pfam PF07510 Protein of unknown function (DUF1524) 430 593 2.0E-13 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 AYJ52_05545 4086e89cc7807a02dfae2cd198fe1a5d 125 Pfam PF06877 Regulator of ribonuclease activity B 11 110 3.0E-27 T 11-10-2018 IPR009671 Regulator of ribonuclease activity B domain AYJ52_05545 4086e89cc7807a02dfae2cd198fe1a5d 125 SUPERFAMILY SSF89946 3 120 1.19E-33 T 11-10-2018 IPR036701 RraB-like superfamily AYJ52_05545 4086e89cc7807a02dfae2cd198fe1a5d 125 Gene3D G3DSA:3.30.70.970 2 123 1.0E-10 T 11-10-2018 IPR036701 RraB-like superfamily AYJ52_01580 3b1a5c575af51175f800472c14244ac3 236 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 78 1.1E-16 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AYJ52_01580 3b1a5c575af51175f800472c14244ac3 236 Gene3D G3DSA:3.10.450.70 18 83 5.0E-12 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AYJ52_01580 3b1a5c575af51175f800472c14244ac3 236 Pfam PF13098 Thioredoxin-like domain 108 231 1.9E-30 T 11-10-2018 IPR012336 Thioredoxin-like fold AYJ52_01580 3b1a5c575af51175f800472c14244ac3 236 Gene3D G3DSA:3.40.30.10 98 236 3.1E-40 T 11-10-2018 AYJ52_01580 3b1a5c575af51175f800472c14244ac3 236 SUPERFAMILY SSF54423 29 81 1.1E-13 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AYJ52_01580 3b1a5c575af51175f800472c14244ac3 236 SUPERFAMILY SSF52833 88 234 3.75E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_19005 e552471e578d30e6d6187f0ea456725d 257 SUPERFAMILY SSF52833 114 253 6.9E-10 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_19005 e552471e578d30e6d6187f0ea456725d 257 Gene3D G3DSA:3.40.30.10 114 256 1.3E-14 T 11-10-2018 AYJ52_03830 4f31bf7b18d16b81a7e6f6f197b102d9 275 Pfam PF13489 Methyltransferase domain 44 215 2.4E-10 T 11-10-2018 AYJ52_03830 4f31bf7b18d16b81a7e6f6f197b102d9 275 SUPERFAMILY SSF53335 27 273 4.07E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_03830 4f31bf7b18d16b81a7e6f6f197b102d9 275 Gene3D G3DSA:3.40.50.150 27 275 3.1E-26 T 11-10-2018 AYJ52_00055 b6819e8986ba50d1c0dbf213e66efdac 232 Gene3D G3DSA:3.40.50.300 29 155 2.2E-22 T 11-10-2018 AYJ52_00055 b6819e8986ba50d1c0dbf213e66efdac 232 Pfam PF00308 Bacterial dnaA protein 41 185 7.0E-9 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AYJ52_00055 b6819e8986ba50d1c0dbf213e66efdac 232 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 224 2.0E-59 T 11-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AYJ52_00055 b6819e8986ba50d1c0dbf213e66efdac 232 SUPERFAMILY SSF52540 36 190 2.68E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_05885 9745064bf6ab95398db1f0f2338811a2 404 SUPERFAMILY SSF103473 10 393 3.4E-53 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_05885 9745064bf6ab95398db1f0f2338811a2 404 Pfam PF07690 Major Facilitator Superfamily 26 355 2.7E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_05885 9745064bf6ab95398db1f0f2338811a2 404 Gene3D G3DSA:1.20.1250.20 14 392 4.3E-41 T 11-10-2018 AYJ52_09180 824c87049403c03beb3130fab279785f 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 18.295 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AYJ52_09180 824c87049403c03beb3130fab279785f 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 96 7.2E-23 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 328 3.0E-27 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 235 8.0E-116 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 SUPERFAMILY SSF46785 257 330 2.38E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 Gene3D G3DSA:3.40.50.300 18 181 3.5E-37 T 11-10-2018 AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 4.9E-143 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 9.9E-30 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 SUPERFAMILY SSF52540 20 252 6.53E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 Gene3D G3DSA:1.10.8.60 182 256 3.7E-32 T 11-10-2018 AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 SMART SM00382 51 178 9.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 Gene3D G3DSA:1.10.10.10 257 333 4.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_18790 06f0c214e9075076a9e1346e6a89b837 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 175.837 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AYJ52_10845 01180bac7e06765d84afe9f5b0f93b76 443 Gene3D G3DSA:1.20.1740.10 6 442 6.2E-65 T 11-10-2018 AYJ52_10845 01180bac7e06765d84afe9f5b0f93b76 443 PIRSF PIRSF006060 1 439 1.3E-56 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_10845 01180bac7e06765d84afe9f5b0f93b76 443 Pfam PF00324 Amino acid permease 16 377 5.1E-29 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_13665 9c29772549475cd9fcc68f5b154c3649 259 Gene3D G3DSA:3.40.30.10 154 259 3.3E-17 T 11-10-2018 AYJ52_13665 9c29772549475cd9fcc68f5b154c3649 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 38 113 4.3E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_13665 9c29772549475cd9fcc68f5b154c3649 259 Pfam PF13417 Glutathione S-transferase, N-terminal domain 162 258 4.2E-9 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_13665 9c29772549475cd9fcc68f5b154c3649 259 SUPERFAMILY SSF52833 36 132 1.08E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_13665 9c29772549475cd9fcc68f5b154c3649 259 SUPERFAMILY SSF52833 143 258 2.09E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_13665 9c29772549475cd9fcc68f5b154c3649 259 Gene3D G3DSA:3.40.30.10 33 133 1.1E-14 T 11-10-2018 AYJ52_15590 53f62c22281789266fdd25172672163e 248 Pfam PF07859 alpha/beta hydrolase fold 59 159 6.2E-10 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AYJ52_15590 53f62c22281789266fdd25172672163e 248 Gene3D G3DSA:3.40.50.1820 21 246 5.9E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15590 53f62c22281789266fdd25172672163e 248 SUPERFAMILY SSF53474 24 241 2.34E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_08945 b250702ff3eb1a6ff7f74818d9db6673 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08945 b250702ff3eb1a6ff7f74818d9db6673 309 Gene3D G3DSA:3.40.190.290 91 298 4.5E-26 T 11-10-2018 AYJ52_08945 b250702ff3eb1a6ff7f74818d9db6673 309 SUPERFAMILY SSF46785 1 107 1.52E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_08945 b250702ff3eb1a6ff7f74818d9db6673 309 Gene3D G3DSA:1.10.10.10 1 90 1.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_08945 b250702ff3eb1a6ff7f74818d9db6673 309 SUPERFAMILY SSF53850 87 298 3.36E-26 T 11-10-2018 AYJ52_08945 b250702ff3eb1a6ff7f74818d9db6673 309 Pfam PF03466 LysR substrate binding domain 85 289 2.2E-23 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_05750 04b16c0dfc4f823e0298e675f6dfe7f7 168 Pfam PF03551 Transcriptional regulator PadR-like family 31 99 6.9E-17 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal AYJ52_05750 04b16c0dfc4f823e0298e675f6dfe7f7 168 Gene3D G3DSA:1.10.10.10 13 122 5.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_05750 04b16c0dfc4f823e0298e675f6dfe7f7 168 SUPERFAMILY SSF46785 14 114 5.06E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_05220 cd738320c2908ae9a8202ce4933ee05e 237 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 235 37.65 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AYJ52_05220 cd738320c2908ae9a8202ce4933ee05e 237 Pfam PF13489 Methyltransferase domain 50 203 3.2E-25 T 11-10-2018 AYJ52_05220 cd738320c2908ae9a8202ce4933ee05e 237 SUPERFAMILY SSF53335 14 230 6.17E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_05220 cd738320c2908ae9a8202ce4933ee05e 237 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 10 229 8.2E-90 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AYJ52_05220 cd738320c2908ae9a8202ce4933ee05e 237 Gene3D G3DSA:3.40.50.150 10 234 4.5E-78 T 11-10-2018 AYJ52_18780 e09f7983ca46fc57f3282eb7787e2d6f 446 Pfam PF01966 HD domain 63 140 1.1E-8 T 11-10-2018 IPR006674 HD domain AYJ52_18780 e09f7983ca46fc57f3282eb7787e2d6f 446 Gene3D G3DSA:1.10.3410.10 245 356 1.2E-138 T 11-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 AYJ52_18780 e09f7983ca46fc57f3282eb7787e2d6f 446 Gene3D G3DSA:1.10.3550.10 114 429 1.2E-138 T 11-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal AYJ52_18780 e09f7983ca46fc57f3282eb7787e2d6f 446 SMART SM00471 59 261 6.1E-8 T 11-10-2018 IPR003607 HD/PDEase domain AYJ52_18780 e09f7983ca46fc57f3282eb7787e2d6f 446 Gene3D G3DSA:1.10.3210.10 28 244 1.2E-138 T 11-10-2018 AYJ52_18780 e09f7983ca46fc57f3282eb7787e2d6f 446 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 26 438 7.8E-95 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AYJ52_18780 e09f7983ca46fc57f3282eb7787e2d6f 446 SUPERFAMILY SSF109604 25 386 2.57E-63 T 11-10-2018 AYJ52_01125 ea1ce8b807a5505f16b520347f533fbe 268 Pfam PF13730 Helix-turn-helix domain 18 67 1.7E-11 T 11-10-2018 AYJ52_01125 ea1ce8b807a5505f16b520347f533fbe 268 Gene3D G3DSA:1.10.10.10 14 109 1.6E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_00050 adf6cb3e669c008a412e11ff8f9d5f6f 617 SUPERFAMILY SSF51126 7 459 1.48E-17 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AYJ52_00050 adf6cb3e669c008a412e11ff8f9d5f6f 617 TIGRFAM TIGR04214 CSLREA_Nterm: CSLREA domain 22 45 2.8E-11 T 11-10-2018 IPR026457 CSLREA domain AYJ52_00050 adf6cb3e669c008a412e11ff8f9d5f6f 617 TIGRFAM TIGR04212 GlyGly_RbtA: rhombotarget A 1 615 2.7E-303 T 11-10-2018 IPR026454 Rhombotarget A AYJ52_01420 bb86422e6638418f623fcb970d20c534 167 SUPERFAMILY SSF141523 9 161 3.01E-22 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AYJ52_01420 bb86422e6638418f623fcb970d20c534 167 Pfam PF03734 L,D-transpeptidase catalytic domain 11 159 3.2E-15 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AYJ52_01420 bb86422e6638418f623fcb970d20c534 167 Gene3D G3DSA:2.40.440.10 3 167 9.3E-24 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AYJ52_15300 49f33725ea3200a5ebed15d31639936d 238 SUPERFAMILY SSF52266 44 234 1.42E-31 T 11-10-2018 AYJ52_15300 49f33725ea3200a5ebed15d31639936d 238 Gene3D G3DSA:3.40.50.1110 22 238 4.4E-24 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AYJ52_15300 49f33725ea3200a5ebed15d31639936d 238 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 50 223 1.1E-16 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain AYJ52_01240 e8bc253eac3d22ee3cdfedd072495ead 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 213 1.2E-47 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AYJ52_01240 e8bc253eac3d22ee3cdfedd072495ead 244 SUPERFAMILY SSF52402 12 201 3.12E-47 T 11-10-2018 AYJ52_01240 e8bc253eac3d22ee3cdfedd072495ead 244 PIRSF PIRSF000857 6 244 3.5E-78 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AYJ52_01240 e8bc253eac3d22ee3cdfedd072495ead 244 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 42 237 1.4E-78 T 11-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 AYJ52_01240 e8bc253eac3d22ee3cdfedd072495ead 244 Gene3D G3DSA:3.40.50.620 6 244 4.5E-67 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_05980 7f244a537a60bb30c8da43bf940979da 77 Pfam PF11391 Protein of unknown function (DUF2798) 10 67 2.3E-22 T 11-10-2018 IPR021529 Protein of unknown function DUF2798 AYJ52_08450 16d1b30f9101e4d3ca657f05243e1f3e 268 Gene3D G3DSA:1.10.287.1080 125 252 5.7E-35 T 11-10-2018 AYJ52_08450 16d1b30f9101e4d3ca657f05243e1f3e 268 Gene3D G3DSA:1.10.287.1080 1 120 4.6E-42 T 11-10-2018 AYJ52_08450 16d1b30f9101e4d3ca657f05243e1f3e 268 SUPERFAMILY SSF101386 136 227 4.11E-18 T 11-10-2018 AYJ52_08450 16d1b30f9101e4d3ca657f05243e1f3e 268 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 21 94 4.0E-25 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AYJ52_08450 16d1b30f9101e4d3ca657f05243e1f3e 268 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 157 218 4.2E-7 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AYJ52_08450 16d1b30f9101e4d3ca657f05243e1f3e 268 TIGRFAM TIGR00444 mazG: MazG family protein 7 249 1.1E-77 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG AYJ52_08450 16d1b30f9101e4d3ca657f05243e1f3e 268 SUPERFAMILY SSF101386 1 96 1.44E-23 T 11-10-2018 AYJ52_02335 b1bb14aa99d4533281a0b5ceb2b75007 187 Pfam PF14066 Protein of unknown function (DUF4256) 15 187 5.5E-88 T 11-10-2018 IPR025352 Protein of unknown function DUF4256 AYJ52_13240 48172ebd2ce22fca71ce29b93625b02b 188 Pfam PF04186 FxsA cytoplasmic membrane protein 6 113 8.4E-22 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AYJ52_14090 2863c29b44b0a173e915068007c4eff1 428 SUPERFAMILY SSF103473 8 421 1.44E-68 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_14090 2863c29b44b0a173e915068007c4eff1 428 Pfam PF07690 Major Facilitator Superfamily 261 421 4.2E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_14090 2863c29b44b0a173e915068007c4eff1 428 Pfam PF00083 Sugar (and other) transporter 18 224 5.2E-26 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AYJ52_14090 2863c29b44b0a173e915068007c4eff1 428 ProSitePatterns PS00217 Sugar transport proteins signature 2. 125 150 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_14090 2863c29b44b0a173e915068007c4eff1 428 Gene3D G3DSA:1.20.1250.20 11 425 5.0E-69 T 11-10-2018 AYJ52_04990 96746ab2e362af8f38fec91c52a6014b 318 Pfam PF03741 Integral membrane protein TerC family 80 282 7.6E-52 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AYJ52_04990 96746ab2e362af8f38fec91c52a6014b 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 313 6.2E-118 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AYJ52_05510 43855f0191a8af2bfdd874400183ab07 233 SUPERFAMILY SSF51735 4 230 7.94E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_05510 43855f0191a8af2bfdd874400183ab07 233 Gene3D G3DSA:3.40.50.720 2 228 2.2E-26 T 11-10-2018 AYJ52_05510 43855f0191a8af2bfdd874400183ab07 233 Pfam PF00106 short chain dehydrogenase 4 194 1.5E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_01020 727b6d27b7c229d034d41d907104bc0b 442 Gene3D G3DSA:2.40.160.10 97 442 3.7E-5 T 11-10-2018 IPR023614 Porin domain superfamily AYJ52_01020 727b6d27b7c229d034d41d907104bc0b 442 SUPERFAMILY SSF56935 90 442 4.07E-25 T 11-10-2018 AYJ52_09855 187cf2ebdb580c41885a1f77be2a7415 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AYJ52_09855 187cf2ebdb580c41885a1f77be2a7415 345 Gene3D G3DSA:3.40.50.300 101 345 9.6E-107 T 11-10-2018 AYJ52_09855 187cf2ebdb580c41885a1f77be2a7415 345 SUPERFAMILY SSF52540 5 334 1.18E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09855 187cf2ebdb580c41885a1f77be2a7415 345 SMART SM00382 122 247 4.3E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_09855 187cf2ebdb580c41885a1f77be2a7415 345 Pfam PF00437 Type II/IV secretion system protein 12 269 1.2E-46 T 11-10-2018 IPR001482 Type II/IV secretion system protein AYJ52_09855 187cf2ebdb580c41885a1f77be2a7415 345 Gene3D G3DSA:3.30.450.90 1 100 5.4E-37 T 11-10-2018 AYJ52_09855 187cf2ebdb580c41885a1f77be2a7415 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 1.7E-155 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AYJ52_02875 4797155329b48a5d0c038eab8bc2d67b 420 SUPERFAMILY SSF102114 44 266 5.1E-14 T 11-10-2018 AYJ52_02875 4797155329b48a5d0c038eab8bc2d67b 420 SUPERFAMILY SSF47781 303 383 9.12E-13 T 11-10-2018 IPR010994 RuvA domain 2-like AYJ52_02875 4797155329b48a5d0c038eab8bc2d67b 420 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 418 2.0E-208 T 11-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative AYJ52_02875 4797155329b48a5d0c038eab8bc2d67b 420 Gene3D G3DSA:3.20.20.70 46 193 7.8E-10 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_02875 4797155329b48a5d0c038eab8bc2d67b 420 Gene3D G3DSA:1.10.150.320 312 376 7.9E-7 T 11-10-2018 AYJ52_00380 8e8fdae8fa8c497d0b77f9073616178d 450 TIGRFAM TIGR00937 2A51: chromate efflux transporter 26 443 5.5E-72 T 11-10-2018 IPR014047 Chromate transporter, long chain AYJ52_00380 8e8fdae8fa8c497d0b77f9073616178d 450 Pfam PF02417 Chromate transporter 19 183 7.0E-38 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AYJ52_00380 8e8fdae8fa8c497d0b77f9073616178d 450 Pfam PF02417 Chromate transporter 259 443 4.1E-33 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AYJ52_00380 8e8fdae8fa8c497d0b77f9073616178d 450 PIRSF PIRSF004810 2 449 1.5E-127 T 11-10-2018 IPR014047 Chromate transporter, long chain AYJ52_08795 24a9a3bcd8204c7df6682eef3c97515f 281 Pfam PF00756 Putative esterase 21 270 7.9E-51 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AYJ52_08795 24a9a3bcd8204c7df6682eef3c97515f 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 3 275 2.3E-119 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AYJ52_08795 24a9a3bcd8204c7df6682eef3c97515f 281 Gene3D G3DSA:3.40.50.1820 1 279 3.5E-86 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_08795 24a9a3bcd8204c7df6682eef3c97515f 281 SUPERFAMILY SSF53474 1 273 9.75E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_09915 c8f9e57a2bb580ad1b5743ed0c203d3a 507 Pfam PF07690 Major Facilitator Superfamily 22 416 1.8E-54 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_09915 c8f9e57a2bb580ad1b5743ed0c203d3a 507 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 493 1.6E-137 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AYJ52_09915 c8f9e57a2bb580ad1b5743ed0c203d3a 507 SUPERFAMILY SSF103473 9 499 1.02E-66 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_09915 c8f9e57a2bb580ad1b5743ed0c203d3a 507 Gene3D G3DSA:1.20.1720.10 18 258 6.6E-47 T 11-10-2018 AYJ52_06250 d190ad3eccb44e63ba656716c68860e9 189 SUPERFAMILY SSF54427 58 187 3.33E-17 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_06250 d190ad3eccb44e63ba656716c68860e9 189 Pfam PF07366 SnoaL-like polyketide cyclase 62 187 2.9E-12 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 AYJ52_06250 d190ad3eccb44e63ba656716c68860e9 189 Gene3D G3DSA:3.10.450.50 59 189 2.2E-19 T 11-10-2018 AYJ52_01650 240f7771d65a265460c9b0d8167c0311 486 Pfam PF00324 Amino acid permease 18 472 7.8E-139 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_01650 240f7771d65a265460c9b0d8167c0311 486 PIRSF PIRSF006060 1 484 8.2E-82 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_01650 240f7771d65a265460c9b0d8167c0311 486 Gene3D G3DSA:1.20.1740.10 8 482 4.6E-62 T 11-10-2018 AYJ52_01650 240f7771d65a265460c9b0d8167c0311 486 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_06965 acf373fc5d7b03181c11275dccb95b02 437 Gene3D G3DSA:3.30.9.30 38 288 5.8E-55 T 11-10-2018 AYJ52_06965 acf373fc5d7b03181c11275dccb95b02 437 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 7.9E-16 T 11-10-2018 AYJ52_06965 acf373fc5d7b03181c11275dccb95b02 437 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 309 325 7.9E-16 T 11-10-2018 AYJ52_06965 acf373fc5d7b03181c11275dccb95b02 437 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 7.9E-16 T 11-10-2018 AYJ52_06965 acf373fc5d7b03181c11275dccb95b02 437 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 7.9E-16 T 11-10-2018 AYJ52_06965 acf373fc5d7b03181c11275dccb95b02 437 Pfam PF01494 FAD binding domain 7 340 1.5E-22 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AYJ52_06965 acf373fc5d7b03181c11275dccb95b02 437 SUPERFAMILY SSF51905 7 395 2.2E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_06965 acf373fc5d7b03181c11275dccb95b02 437 Gene3D G3DSA:3.50.50.60 7 355 5.8E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_15965 0ff1e4b44a053732db9f03025aa6e591 342 SMART SM00972 273 339 2.5E-17 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_15965 0ff1e4b44a053732db9f03025aa6e591 342 Pfam PF05229 Spore Coat Protein U domain 196 339 2.6E-25 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_18005 e9741449c0bc93b8d705cf387fbbe955 187 Gene3D G3DSA:1.20.1290.10 13 177 1.3E-23 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AYJ52_18005 e9741449c0bc93b8d705cf387fbbe955 187 SUPERFAMILY SSF69118 1 174 1.92E-24 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AYJ52_17810 5f1e301e04f94a6656e344ebc8f7364c 412 Pfam PF01471 Putative peptidoglycan binding domain 144 189 3.5E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like AYJ52_17810 5f1e301e04f94a6656e344ebc8f7364c 412 SUPERFAMILY SSF47090 142 190 2.35E-11 T 11-10-2018 IPR036365 PGBD-like superfamily AYJ52_17810 5f1e301e04f94a6656e344ebc8f7364c 412 SUPERFAMILY SSF141523 280 408 4.71E-27 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AYJ52_17810 5f1e301e04f94a6656e344ebc8f7364c 412 Gene3D G3DSA:2.40.440.10 222 412 1.9E-43 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AYJ52_17810 5f1e301e04f94a6656e344ebc8f7364c 412 Pfam PF03734 L,D-transpeptidase catalytic domain 280 407 2.3E-18 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AYJ52_17810 5f1e301e04f94a6656e344ebc8f7364c 412 Gene3D G3DSA:1.10.101.10 138 200 4.6E-10 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 331 5.8E-132 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 SUPERFAMILY SSF51569 6 335 4.15E-134 T 11-10-2018 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 PIRSF PIRSF001415 2 336 6.5E-140 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 Gene3D G3DSA:3.20.20.70 2 337 2.0E-140 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.7E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AYJ52_09900 14489558ea32e18dc9d488488011dda4 337 SMART SM01004 10 333 4.6E-223 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AYJ52_05245 56fe3074207fb5cf9631cf5eb91ef49f 382 Pfam PF00487 Fatty acid desaturase 75 341 2.9E-32 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AYJ52_00720 b23e35dcd0cf582740dd825d15e19375 337 SUPERFAMILY SSF52374 9 334 4.91E-79 T 11-10-2018 AYJ52_00720 b23e35dcd0cf582740dd825d15e19375 337 Gene3D G3DSA:3.40.50.620 10 329 2.7E-104 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_00720 b23e35dcd0cf582740dd825d15e19375 337 Pfam PF00579 tRNA synthetases class I (W and Y) 7 288 4.5E-55 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_00720 b23e35dcd0cf582740dd825d15e19375 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 71 90 1.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AYJ52_00720 b23e35dcd0cf582740dd825d15e19375 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 20 36 1.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AYJ52_00720 b23e35dcd0cf582740dd825d15e19375 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 1.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AYJ52_00720 b23e35dcd0cf582740dd825d15e19375 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 1.3E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AYJ52_00720 b23e35dcd0cf582740dd825d15e19375 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AYJ52_00720 b23e35dcd0cf582740dd825d15e19375 337 Gene3D G3DSA:1.10.240.10 188 302 2.7E-104 T 11-10-2018 AYJ52_00720 b23e35dcd0cf582740dd825d15e19375 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 7 334 1.6E-71 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AYJ52_10450 6782106a39769d6ea6ddc71f3afd5bfd 445 TIGRFAM TIGR00784 citMHS: citrate transporter 1 439 1.8E-171 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 AYJ52_10450 6782106a39769d6ea6ddc71f3afd5bfd 445 Pfam PF03600 Citrate transporter 13 387 1.3E-50 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AYJ52_03650 395161ddf7545e9921150851aca6a3ee 70 Gene3D G3DSA:1.10.260.40 2 69 1.1E-18 T 11-10-2018 AYJ52_03650 395161ddf7545e9921150851aca6a3ee 70 Pfam PF01381 Helix-turn-helix 12 66 1.2E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_03650 395161ddf7545e9921150851aca6a3ee 70 SMART SM00530 11 66 2.6E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_03650 395161ddf7545e9921150851aca6a3ee 70 SUPERFAMILY SSF47413 2 68 5.07E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_14600 f3da276d5b5e4b6c1bbe13fc692fef5d 162 Pfam PF00583 Acetyltransferase (GNAT) family 26 142 7.8E-17 T 11-10-2018 IPR000182 GNAT domain AYJ52_14600 f3da276d5b5e4b6c1bbe13fc692fef5d 162 Gene3D G3DSA:3.40.630.30 6 161 2.1E-26 T 11-10-2018 AYJ52_14600 f3da276d5b5e4b6c1bbe13fc692fef5d 162 SUPERFAMILY SSF55729 29 160 5.86E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_10170 e2e113dae82606ab3907c782af71957f 355 SUPERFAMILY SSF50022 10 132 4.84E-32 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_10170 e2e113dae82606ab3907c782af71957f 355 Gene3D G3DSA:3.30.530.90 151 340 9.6E-8 T 11-10-2018 AYJ52_10170 e2e113dae82606ab3907c782af71957f 355 SUPERFAMILY SSF55961 136 334 8.51E-42 T 11-10-2018 AYJ52_10170 e2e113dae82606ab3907c782af71957f 355 Pfam PF00355 Rieske [2Fe-2S] domain 22 103 1.3E-17 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AYJ52_10170 e2e113dae82606ab3907c782af71957f 355 Gene3D G3DSA:2.102.10.10 19 150 2.0E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_07145 9a49a33d62b642b9bd5dfd3542696463 401 SUPERFAMILY SSF51905 2 395 2.04E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_07145 9a49a33d62b642b9bd5dfd3542696463 401 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 26 400 8.1E-184 T 11-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 AYJ52_07145 9a49a33d62b642b9bd5dfd3542696463 401 Gene3D G3DSA:3.50.50.60 6 392 1.4E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_07145 9a49a33d62b642b9bd5dfd3542696463 401 PRINTS PR00419 Adrenodoxin reductase family signature 28 41 1.8E-6 T 11-10-2018 AYJ52_07145 9a49a33d62b642b9bd5dfd3542696463 401 PRINTS PR00419 Adrenodoxin reductase family signature 5 27 1.8E-6 T 11-10-2018 AYJ52_07145 9a49a33d62b642b9bd5dfd3542696463 401 SUPERFAMILY SSF160996 204 341 1.83E-16 T 11-10-2018 AYJ52_07145 9a49a33d62b642b9bd5dfd3542696463 401 Gene3D G3DSA:2.40.30.10 192 341 1.4E-62 T 11-10-2018 AYJ52_07145 9a49a33d62b642b9bd5dfd3542696463 401 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 4.7E-78 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AYJ52_07145 9a49a33d62b642b9bd5dfd3542696463 401 Pfam PF03486 HI0933-like protein 5 393 2.6E-83 T 11-10-2018 AYJ52_07145 9a49a33d62b642b9bd5dfd3542696463 401 Gene3D G3DSA:1.10.8.260 271 324 1.4E-62 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily AYJ52_05745 f1089b5d88ca16c0b7351e9cea33ba37 262 Pfam PF01909 Nucleotidyltransferase domain 12 89 3.0E-6 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AYJ52_05745 f1089b5d88ca16c0b7351e9cea33ba37 262 SUPERFAMILY SSF81301 7 89 2.8E-11 T 11-10-2018 AYJ52_05745 f1089b5d88ca16c0b7351e9cea33ba37 262 Gene3D G3DSA:3.30.460.10 4 98 2.3E-8 T 11-10-2018 AYJ52_05745 f1089b5d88ca16c0b7351e9cea33ba37 262 Pfam PF13427 Domain of unknown function (DUF4111) 147 247 6.4E-20 T 11-10-2018 IPR025184 Domain of unknown function DUF4111 AYJ52_08495 79c066870156dee436747b3eb2b80f0e 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 11-10-2018 IPR020845 AMP-binding, conserved site AYJ52_08495 79c066870156dee436747b3eb2b80f0e 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 528 1.6E-19 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AYJ52_08495 79c066870156dee436747b3eb2b80f0e 545 Gene3D G3DSA:3.30.300.310 441 544 1.8E-33 T 11-10-2018 AYJ52_08495 79c066870156dee436747b3eb2b80f0e 545 Pfam PF00501 AMP-binding enzyme 25 445 5.5E-100 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AYJ52_08495 79c066870156dee436747b3eb2b80f0e 545 Gene3D G3DSA:3.40.50.12780 8 440 1.8E-109 T 11-10-2018 AYJ52_08495 79c066870156dee436747b3eb2b80f0e 545 SUPERFAMILY SSF56801 10 540 1.31E-146 T 11-10-2018 AYJ52_12625 2990268dad3c640c7565bd6472f9f9f8 307 Pfam PF06426 Serine acetyltransferase, N-terminal 83 159 7.4E-5 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AYJ52_12625 2990268dad3c640c7565bd6472f9f9f8 307 SUPERFAMILY SSF51161 112 290 1.94E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_12625 2990268dad3c640c7565bd6472f9f9f8 307 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 194 229 8.3E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_12625 2990268dad3c640c7565bd6472f9f9f8 307 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 249 283 1.2E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_12625 2990268dad3c640c7565bd6472f9f9f8 307 PIRSF PIRSF000441 123 305 2.1E-51 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AYJ52_12625 2990268dad3c640c7565bd6472f9f9f8 307 Gene3D G3DSA:1.10.3130.10 33 189 4.6E-51 T 11-10-2018 AYJ52_12625 2990268dad3c640c7565bd6472f9f9f8 307 Gene3D G3DSA:2.160.10.10 190 304 4.2E-29 T 11-10-2018 AYJ52_13645 af3c9a86f808f3f32dc0e7563f57771a 244 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 27 96 1.6E-7 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AYJ52_13645 af3c9a86f808f3f32dc0e7563f57771a 244 Gene3D G3DSA:3.40.50.1240 26 228 9.6E-12 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AYJ52_13645 af3c9a86f808f3f32dc0e7563f57771a 244 SUPERFAMILY SSF53254 27 196 2.23E-15 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AYJ52_11210 36311dccda959685f7aef490bc077065 269 Gene3D G3DSA:2.70.70.10 112 269 8.0E-51 T 11-10-2018 IPR011055 Duplicated hybrid motif AYJ52_11210 36311dccda959685f7aef490bc077065 269 SUPERFAMILY SSF51261 82 265 1.31E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif AYJ52_11210 36311dccda959685f7aef490bc077065 269 Gene3D G3DSA:2.60.40.1590 20 111 3.9E-20 T 11-10-2018 AYJ52_11210 36311dccda959685f7aef490bc077065 269 Pfam PF01551 Peptidase family M23 167 261 7.5E-30 T 11-10-2018 IPR016047 Peptidase M23 AYJ52_13415 abe8520629e6963f8a71a4253cba2c55 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 206 26.692 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AYJ52_13415 abe8520629e6963f8a71a4253cba2c55 210 Gene3D G3DSA:3.40.50.150 4 209 4.5E-64 T 11-10-2018 AYJ52_13415 abe8520629e6963f8a71a4253cba2c55 210 Pfam PF02527 rRNA small subunit methyltransferase G 26 204 5.4E-51 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AYJ52_13415 abe8520629e6963f8a71a4253cba2c55 210 PIRSF PIRSF003078 1 210 6.8E-51 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AYJ52_13415 abe8520629e6963f8a71a4253cba2c55 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 208 2.8E-49 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AYJ52_13415 abe8520629e6963f8a71a4253cba2c55 210 SUPERFAMILY SSF53335 7 209 4.96E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_10385 ec6d68cdf943d804ec86d5750f70738a 194 Pfam PF05036 Sporulation related domain 113 172 3.6E-8 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AYJ52_10385 ec6d68cdf943d804ec86d5750f70738a 194 SUPERFAMILY SSF110997 112 186 4.71E-11 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AYJ52_12315 bffa30681856beba7572f040216ae935 405 SUPERFAMILY SSF89796 1 404 2.62E-140 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AYJ52_12315 bffa30681856beba7572f040216ae935 405 Gene3D G3DSA:3.40.50.10540 4 398 2.5E-138 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AYJ52_12315 bffa30681856beba7572f040216ae935 405 Pfam PF02515 CoA-transferase family III 4 382 7.9E-133 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 AYJ52_12315 bffa30681856beba7572f040216ae935 405 Gene3D G3DSA:3.30.1540.10 242 333 2.5E-138 T 11-10-2018 AYJ52_02790 d15c664fa93757906a9c80d73adb8243 213 PIRSF PIRSF004649 1 213 3.5E-54 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AYJ52_02790 d15c664fa93757906a9c80d73adb8243 213 Pfam PF05494 MlaC protein 36 190 4.3E-36 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AYJ52_02790 d15c664fa93757906a9c80d73adb8243 213 Gene3D G3DSA:3.10.450.710 27 207 9.1E-46 T 11-10-2018 AYJ52_02795 cac6af8fb0c245cbe625d5b61177588c 226 Pfam PF02470 MlaD protein 38 164 7.5E-32 T 11-10-2018 IPR003399 Mce/MlaD AYJ52_10855 cd35aee6a15c7ac9f68f8b10a71fe8d7 239 Pfam PF07729 FCD domain 106 223 2.7E-7 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_10855 cd35aee6a15c7ac9f68f8b10a71fe8d7 239 Gene3D G3DSA:1.10.10.10 5 81 2.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10855 cd35aee6a15c7ac9f68f8b10a71fe8d7 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 75 2.5E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_10855 cd35aee6a15c7ac9f68f8b10a71fe8d7 239 SMART SM00345 20 81 2.9E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_10855 cd35aee6a15c7ac9f68f8b10a71fe8d7 239 SUPERFAMILY SSF48008 103 233 2.88E-7 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_10855 cd35aee6a15c7ac9f68f8b10a71fe8d7 239 SUPERFAMILY SSF46785 11 85 2.47E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_10855 cd35aee6a15c7ac9f68f8b10a71fe8d7 239 SMART SM00895 105 226 3.5E-4 T 11-10-2018 IPR011711 GntR, C-terminal AYJ52_10855 cd35aee6a15c7ac9f68f8b10a71fe8d7 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 9.5E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_10855 cd35aee6a15c7ac9f68f8b10a71fe8d7 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 9.5E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_10855 cd35aee6a15c7ac9f68f8b10a71fe8d7 239 Gene3D G3DSA:1.20.120.530 101 235 3.8E-8 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AYJ52_18795 12796c35a857bbda0aca340229af03d6 444 SUPERFAMILY SSF53187 22 430 1.6E-77 T 11-10-2018 AYJ52_18795 12796c35a857bbda0aca340229af03d6 444 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 35 419 7.6E-101 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AYJ52_18795 12796c35a857bbda0aca340229af03d6 444 Gene3D G3DSA:3.30.70.360 221 336 1.0E-128 T 11-10-2018 AYJ52_18795 12796c35a857bbda0aca340229af03d6 444 Gene3D G3DSA:3.40.630.10 34 416 1.0E-128 T 11-10-2018 AYJ52_18795 12796c35a857bbda0aca340229af03d6 444 Pfam PF07687 Peptidase dimerisation domain 226 322 9.2E-13 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AYJ52_18795 12796c35a857bbda0aca340229af03d6 444 Pfam PF01546 Peptidase family M20/M25/M40 92 428 4.5E-32 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AYJ52_18795 12796c35a857bbda0aca340229af03d6 444 SUPERFAMILY SSF55031 224 331 1.96E-26 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AYJ52_18795 12796c35a857bbda0aca340229af03d6 444 PIRSF PIRSF005962 20 435 1.1E-111 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AYJ52_09985 d54523d831c9752397a3f050eaa3eaf9 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 178 4.0E-30 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AYJ52_09985 d54523d831c9752397a3f050eaa3eaf9 189 Pfam PF04542 Sigma-70 region 2 27 93 2.0E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AYJ52_09985 d54523d831c9752397a3f050eaa3eaf9 189 SUPERFAMILY SSF88946 23 105 7.85E-18 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AYJ52_09985 d54523d831c9752397a3f050eaa3eaf9 189 SUPERFAMILY SSF88659 106 180 6.76E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ52_09985 d54523d831c9752397a3f050eaa3eaf9 189 Gene3D G3DSA:1.10.1740.10 12 90 7.0E-13 T 11-10-2018 AYJ52_09985 d54523d831c9752397a3f050eaa3eaf9 189 Pfam PF08281 Sigma-70, region 4 130 171 7.5E-11 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AYJ52_09985 d54523d831c9752397a3f050eaa3eaf9 189 Gene3D G3DSA:1.10.10.10 100 183 1.1E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_08125 9d67b1dba8bd81574d8b0b502661c323 119 Pfam PF00872 Transposase, Mutator family 19 94 1.7E-18 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AYJ52_03020 e6e736ba4f6548d8f17b66cb4dcc8b71 716 Pfam PF13515 Fusaric acid resistance protein-like 409 530 4.8E-23 T 11-10-2018 AYJ52_03020 e6e736ba4f6548d8f17b66cb4dcc8b71 716 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 709 1.2E-198 T 11-10-2018 IPR010020 Integral membrane protein, YccS/YhfK AYJ52_03020 e6e736ba4f6548d8f17b66cb4dcc8b71 716 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 11 709 7.1E-204 T 11-10-2018 IPR010019 Integral membrane protein, YccS AYJ52_03020 e6e736ba4f6548d8f17b66cb4dcc8b71 716 Pfam PF12805 FUSC-like inner membrane protein yccS 68 346 4.5E-87 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal AYJ52_09280 26ed17a59c10ede62c9bfa925fbf7406 166 SUPERFAMILY SSF58113 5 160 3.01E-7 T 11-10-2018 AYJ52_09280 26ed17a59c10ede62c9bfa925fbf7406 166 Gene3D G3DSA:1.20.120.20 1 136 2.7E-9 T 11-10-2018 AYJ52_00375 856daa1ac7ad6c18169056e97a9c4d8b 306 Pfam PF09828 Chromate resistance exported protein 175 301 8.4E-44 T 11-10-2018 IPR018634 Chromate resistance exported protein AYJ52_05225 efdf454d8bbc1825f7e6ab51c4592f51 205 PIRSF PIRSF001488 1 205 3.3E-51 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AYJ52_05225 efdf454d8bbc1825f7e6ab51c4592f51 205 Gene3D G3DSA:3.40.30.10 24 205 8.7E-55 T 11-10-2018 AYJ52_05225 efdf454d8bbc1825f7e6ab51c4592f51 205 SUPERFAMILY SSF52833 24 185 6.66E-43 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_05225 efdf454d8bbc1825f7e6ab51c4592f51 205 Pfam PF01323 DSBA-like thioredoxin domain 84 187 5.6E-17 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AYJ52_04155 cf73b07d717afb4968f8fb71f3708ffa 70 Pfam PF08410 Domain of unknown function (DUF1737) 1 50 1.1E-22 T 11-10-2018 IPR013619 Domain of unknown function DUF1737 AYJ52_14860 7a7466160a67ae8282e76ed5bc4d6bf7 300 Gene3D G3DSA:1.20.1530.20 2 288 1.9E-73 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AYJ52_14860 7a7466160a67ae8282e76ed5bc4d6bf7 300 Pfam PF01758 Sodium Bile acid symporter family 11 194 1.2E-32 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AYJ52_05975 2238f2228ae1c19c0d68e76cac65ef63 162 Gene3D G3DSA:1.10.530.10 25 159 4.8E-29 T 11-10-2018 AYJ52_05975 2238f2228ae1c19c0d68e76cac65ef63 162 Pfam PF01464 Transglycosylase SLT domain 42 146 1.1E-20 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AYJ52_05975 2238f2228ae1c19c0d68e76cac65ef63 162 SUPERFAMILY SSF53955 27 158 2.36E-32 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_06280 c7dbbf79e1a61aa0f74c8f9bf3a4fd2b 337 SUPERFAMILY SSF81301 1 130 5.4E-5 T 11-10-2018 AYJ52_06280 c7dbbf79e1a61aa0f74c8f9bf3a4fd2b 337 Gene3D G3DSA:3.30.460.10 21 158 5.5E-7 T 11-10-2018 AYJ52_10015 2dbd230d6ed8f458bb9ba685e8d25db7 198 Gene3D G3DSA:1.20.910.10 3 194 8.7E-46 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_10015 2dbd230d6ed8f458bb9ba685e8d25db7 198 SUPERFAMILY SSF48613 11 193 5.4E-50 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_10015 2dbd230d6ed8f458bb9ba685e8d25db7 198 Pfam PF01126 Heme oxygenase 12 191 3.3E-18 T 11-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_16345 fe0eaf86eac525e494e9a8f5958988e1 119 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 97 9.0E-6 T 11-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AYJ52_16345 fe0eaf86eac525e494e9a8f5958988e1 119 SUPERFAMILY SSF55331 2 118 2.04E-25 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AYJ52_16345 fe0eaf86eac525e494e9a8f5958988e1 119 Gene3D G3DSA:3.30.429.10 1 119 3.1E-35 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AYJ52_11930 a349960b0afb294663bb550a81e8ec0c 184 Gene3D G3DSA:1.10.357.10 7 182 4.1E-21 T 11-10-2018 AYJ52_11930 a349960b0afb294663bb550a81e8ec0c 184 SUPERFAMILY SSF46689 6 73 9.75E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_11930 a349960b0afb294663bb550a81e8ec0c 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 8.7E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_02025 0b172dc1901d74e5159e790e99d30c76 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 362 5.5E-93 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AYJ52_02025 0b172dc1901d74e5159e790e99d30c76 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 57.181 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AYJ52_02025 0b172dc1901d74e5159e790e99d30c76 377 SUPERFAMILY SSF51713 1 365 5.89E-163 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AYJ52_02025 0b172dc1901d74e5159e790e99d30c76 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 369 1.7E-172 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AYJ52_02025 0b172dc1901d74e5159e790e99d30c76 377 Gene3D G3DSA:3.20.20.105 1 368 2.6E-171 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AYJ52_02025 0b172dc1901d74e5159e790e99d30c76 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 368 9.7E-164 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AYJ52_04695 8d0c723f2723ae28f85757ec543b54eb 186 SUPERFAMILY SSF48150 4 184 1.94E-72 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AYJ52_04695 8d0c723f2723ae28f85757ec543b54eb 186 Pfam PF03352 Methyladenine glycosylase 8 183 1.0E-67 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AYJ52_04695 8d0c723f2723ae28f85757ec543b54eb 186 Gene3D G3DSA:1.10.340.30 3 186 2.3E-72 T 11-10-2018 AYJ52_17150 e28fa522e204e88c946468b1982e62e5 293 Pfam PF05673 Protein of unknown function (DUF815) 36 283 1.9E-103 T 11-10-2018 IPR008533 Domain of unknown function DUF815 AYJ52_17150 e28fa522e204e88c946468b1982e62e5 293 SUPERFAMILY SSF52540 44 191 1.71E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17150 e28fa522e204e88c946468b1982e62e5 293 Gene3D G3DSA:3.40.50.300 47 191 1.3E-11 T 11-10-2018 AYJ52_16315 698bd303250d8e98aa3cd841bec5f2ea 234 SUPERFAMILY SSF49354 19 141 3.14E-21 T 11-10-2018 IPR008962 PapD-like superfamily AYJ52_16315 698bd303250d8e98aa3cd841bec5f2ea 234 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 1.5E-17 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AYJ52_16315 698bd303250d8e98aa3cd841bec5f2ea 234 Gene3D G3DSA:2.60.40.10 33 144 5.6E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_11395 c07c6796bad223cc6592ae6472bc3ff4 95 Pfam PF06099 Phenol hydroxylase subunit 3 58 2.8E-21 T 11-10-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 AYJ52_11395 c07c6796bad223cc6592ae6472bc3ff4 95 ProDom PD468738 PHENOL HYDROXYLASE COMPONENT SUBUNIT PHENOLHYDROXYLASE MONOOXYGENASE TOMA0 P0 HYDROCARBONS IRON 4 50 2.0E-21 T 11-10-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 AYJ52_11395 c07c6796bad223cc6592ae6472bc3ff4 95 PIRSF PIRSF000039 1 93 1.2E-33 T 11-10-2018 IPR010353 Phenol hydroxylase subunit KEGG: 00623+1.14.13.7|KEGG: 00627+1.14.13.7|MetaCyc: PWY-5418|MetaCyc: PWY-6197 AYJ52_18255 78ece63fda2e18be3c96ff191ecf59ca 343 Gene3D G3DSA:3.40.190.10 29 308 4.8E-50 T 11-10-2018 AYJ52_18255 78ece63fda2e18be3c96ff191ecf59ca 343 Gene3D G3DSA:3.40.190.10 115 281 4.8E-50 T 11-10-2018 AYJ52_18255 78ece63fda2e18be3c96ff191ecf59ca 343 Pfam PF12849 PBP superfamily domain 20 307 3.2E-42 T 11-10-2018 IPR024370 PBP domain AYJ52_18255 78ece63fda2e18be3c96ff191ecf59ca 343 SUPERFAMILY SSF53850 28 337 1.32E-60 T 11-10-2018 AYJ52_10080 d80d7573194c91e3ef0a7ab3d61c1f4c 688 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 26 511 4.8E-176 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AYJ52_10080 d80d7573194c91e3ef0a7ab3d61c1f4c 688 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 64 511 2.4E-170 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AYJ52_13405 f454059955a399988f97245c862bf06c 337 Gene3D G3DSA:3.30.200.20 1 92 8.7E-25 T 11-10-2018 AYJ52_13405 f454059955a399988f97245c862bf06c 337 SUPERFAMILY SSF56112 10 305 1.56E-42 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_13405 f454059955a399988f97245c862bf06c 337 Pfam PF01636 Phosphotransferase enzyme family 24 243 6.5E-25 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AYJ52_13405 f454059955a399988f97245c862bf06c 337 Gene3D G3DSA:3.90.1200.10 93 330 1.5E-66 T 11-10-2018 AYJ52_04245 1f017b06031b717a30275a8199e86be9 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 4.6E-19 T 11-10-2018 AYJ52_04245 1f017b06031b717a30275a8199e86be9 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 4.6E-19 T 11-10-2018 AYJ52_04245 1f017b06031b717a30275a8199e86be9 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 4.6E-19 T 11-10-2018 AYJ52_04245 1f017b06031b717a30275a8199e86be9 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 326 342 4.6E-19 T 11-10-2018 AYJ52_04245 1f017b06031b717a30275a8199e86be9 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.6E-19 T 11-10-2018 AYJ52_04245 1f017b06031b717a30275a8199e86be9 385 Gene3D G3DSA:3.30.9.30 35 269 4.5E-112 T 11-10-2018 AYJ52_04245 1f017b06031b717a30275a8199e86be9 385 SUPERFAMILY SSF51905 1 358 5.83E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_04245 1f017b06031b717a30275a8199e86be9 385 Pfam PF01494 FAD binding domain 2 339 9.8E-28 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AYJ52_04245 1f017b06031b717a30275a8199e86be9 385 Gene3D G3DSA:3.50.50.60 4 342 4.5E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_02905 d57a94af6cb5f7727b1db77539fcf8ed 94 Pfam PF03795 YCII-related domain 1 74 6.8E-11 T 11-10-2018 IPR005545 YCII-related AYJ52_02905 d57a94af6cb5f7727b1db77539fcf8ed 94 SUPERFAMILY SSF54909 3 81 3.75E-13 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AYJ52_04410 a051a1d7784f85a38f3a9576711cf598 147 SUPERFAMILY SSF69500 1 144 7.06E-54 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AYJ52_04410 a051a1d7784f85a38f3a9576711cf598 147 Gene3D G3DSA:3.50.80.10 1 145 3.5E-53 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AYJ52_04410 a051a1d7784f85a38f3a9576711cf598 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 8.0E-50 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AYJ52_04410 a051a1d7784f85a38f3a9576711cf598 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 31.878 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AYJ52_04410 a051a1d7784f85a38f3a9576711cf598 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 5.1E-55 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AYJ52_01055 96adfb2ba9a800569217bb165b360ed9 122 SUPERFAMILY SSF142906 9 119 5.89E-35 T 11-10-2018 IPR038056 YjbR-like superfamily AYJ52_01055 96adfb2ba9a800569217bb165b360ed9 122 Pfam PF04237 YjbR 17 106 2.1E-21 T 11-10-2018 IPR007351 Uncharacterised protein YjbR AYJ52_01055 96adfb2ba9a800569217bb165b360ed9 122 Gene3D G3DSA:3.90.1150.30 2 122 1.8E-38 T 11-10-2018 IPR038056 YjbR-like superfamily AYJ52_14210 1bfcc7589ffde7acd48849d466db8c4f 412 SUPERFAMILY SSF51905 2 356 9.93E-18 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14210 1bfcc7589ffde7acd48849d466db8c4f 412 Gene3D G3DSA:3.50.50.60 4 322 4.1E-128 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14210 1bfcc7589ffde7acd48849d466db8c4f 412 Gene3D G3DSA:3.30.9.40 65 271 4.1E-128 T 11-10-2018 AYJ52_17390 950c5ec40c2ad817138565de4132e523 56 Gene3D G3DSA:2.10.70.10 19 56 8.6E-18 T 11-10-2018 AYJ52_17390 950c5ec40c2ad817138565de4132e523 56 Pfam PF10636 Hemin uptake protein hemP 21 56 1.4E-16 T 11-10-2018 IPR019600 Hemin uptake protein HemP AYJ52_07835 edfff32dfd43462d9804edd26c45c5b2 141 PIRSF PIRSF020565 2 140 3.5E-37 T 11-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted AYJ52_07835 edfff32dfd43462d9804edd26c45c5b2 141 Gene3D G3DSA:3.10.129.10 4 133 5.1E-17 T 11-10-2018 AYJ52_07835 edfff32dfd43462d9804edd26c45c5b2 141 SUPERFAMILY SSF54637 6 133 1.81E-21 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_11715 607ae4816816b5f11e86e15adaa82838 222 Gene3D G3DSA:3.40.50.150 1 222 1.2E-64 T 11-10-2018 AYJ52_11715 607ae4816816b5f11e86e15adaa82838 222 SUPERFAMILY SSF53335 4 221 5.4E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_11715 607ae4816816b5f11e86e15adaa82838 222 Pfam PF01596 O-methyltransferase 27 199 3.4E-39 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 AYJ52_17875 2b115d55d6aaeae85635510ada803386 256 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_17875 2b115d55d6aaeae85635510ada803386 256 Gene3D G3DSA:3.40.50.300 1 252 5.2E-69 T 11-10-2018 AYJ52_17875 2b115d55d6aaeae85635510ada803386 256 SUPERFAMILY SSF52540 2 228 1.7E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17875 2b115d55d6aaeae85635510ada803386 256 SMART SM00382 26 213 2.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_17875 2b115d55d6aaeae85635510ada803386 256 Pfam PF00005 ABC transporter 17 164 1.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_04340 8bda10df88c9fcd190027aa90e4ecaad 436 Pfam PF04286 Protein of unknown function (DUF445) 55 430 3.8E-72 T 11-10-2018 IPR007383 Protein of unknown function DUF445 AYJ52_19375 1429719e93d44c9b8b7c22527f47f0f5 403 Gene3D G3DSA:3.40.50.300 1 117 2.1E-8 T 11-10-2018 AYJ52_19375 1429719e93d44c9b8b7c22527f47f0f5 403 Gene3D G3DSA:1.10.3290.10 152 393 3.4E-17 T 11-10-2018 IPR036597 Fido-like domain superfamily AYJ52_00265 fac0f0815326c95720485b959e6e3150 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.6E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_00265 fac0f0815326c95720485b959e6e3150 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.6E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_00265 fac0f0815326c95720485b959e6e3150 184 SUPERFAMILY SSF46689 13 69 7.18E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_00265 fac0f0815326c95720485b959e6e3150 184 Gene3D G3DSA:1.10.357.10 9 168 2.4E-16 T 11-10-2018 AYJ52_00265 fac0f0815326c95720485b959e6e3150 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 55 2.5E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_03255 d0ed815170a09c1f40a993a00e7ac4d1 250 Pfam PF04350 Pilus assembly protein, PilO 73 220 4.2E-49 T 11-10-2018 IPR007445 Pilus assembly protein, PilO AYJ52_03255 d0ed815170a09c1f40a993a00e7ac4d1 250 Gene3D G3DSA:3.30.70.60 118 231 3.3E-33 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AYJ52_03255 d0ed815170a09c1f40a993a00e7ac4d1 250 PIRSF PIRSF016482 21 236 2.2E-58 T 11-10-2018 IPR007445 Pilus assembly protein, PilO AYJ52_19365 a696b86442afb60c4d5608aea6cfe10b 86 SUPERFAMILY SSF52540 14 67 1.25E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_19365 a696b86442afb60c4d5608aea6cfe10b 86 Gene3D G3DSA:3.40.50.300 1 82 1.1E-8 T 11-10-2018 AYJ52_17545 5a5d5390e66dafe0a91ab267bf014e65 333 Pfam PF13406 Transglycosylase SLT domain 36 327 1.1E-86 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 AYJ52_17545 5a5d5390e66dafe0a91ab267bf014e65 333 Gene3D G3DSA:1.10.8.350 43 209 4.1E-93 T 11-10-2018 AYJ52_17545 5a5d5390e66dafe0a91ab267bf014e65 333 Gene3D G3DSA:1.10.530.10 76 327 4.1E-93 T 11-10-2018 AYJ52_17545 5a5d5390e66dafe0a91ab267bf014e65 333 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 39 330 1.2E-92 T 11-10-2018 IPR011757 Lytic transglycosylase MltB AYJ52_17545 5a5d5390e66dafe0a91ab267bf014e65 333 SUPERFAMILY SSF53955 24 331 2.62E-80 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AYJ52_13210 17af0febeb8868eef9fa256c303be101 366 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 23 358 9.3E-141 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AYJ52_13210 17af0febeb8868eef9fa256c303be101 366 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 16 324 45.534 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AYJ52_13210 17af0febeb8868eef9fa256c303be101 366 Pfam PF08331 Domain of unknown function (DUF1730) 71 149 7.3E-24 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AYJ52_13210 17af0febeb8868eef9fa256c303be101 366 SUPERFAMILY SSF46548 148 265 8.37E-17 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AYJ52_13210 17af0febeb8868eef9fa256c303be101 366 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 202 213 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ52_13210 17af0febeb8868eef9fa256c303be101 366 Pfam PF13484 4Fe-4S double cluster binding domain 201 265 5.3E-20 T 11-10-2018 AYJ52_14255 2218fac429c3de3d897a03a17e51bdab 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 215 5.5E-66 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AYJ52_14255 2218fac429c3de3d897a03a17e51bdab 230 Gene3D G3DSA:1.10.3720.10 2 226 4.5E-54 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_14255 2218fac429c3de3d897a03a17e51bdab 230 SUPERFAMILY SSF161098 7 220 4.97E-47 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_14255 2218fac429c3de3d897a03a17e51bdab 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 222 8.9E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_11485 0648739ea7bcd692c0e14972fdcd18fd 205 PIRSF PIRSF006324 1 205 1.1E-51 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_11485 0648739ea7bcd692c0e14972fdcd18fd 205 Pfam PF01810 LysE type translocator 14 204 7.4E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_08940 377ae5f399d260edb853ea0feef49a10 436 Gene3D G3DSA:1.20.1250.20 12 433 1.1E-67 T 11-10-2018 AYJ52_08940 377ae5f399d260edb853ea0feef49a10 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_08940 377ae5f399d260edb853ea0feef49a10 436 Pfam PF07690 Major Facilitator Superfamily 20 374 2.9E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_08940 377ae5f399d260edb853ea0feef49a10 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_08940 377ae5f399d260edb853ea0feef49a10 436 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_08940 377ae5f399d260edb853ea0feef49a10 436 SUPERFAMILY SSF103473 12 424 2.88E-69 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_02700 8d742b59839c772f16a38387be147f2f 242 SUPERFAMILY SSF52317 27 223 1.06E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_02700 8d742b59839c772f16a38387be147f2f 242 Pfam PF00117 Glutamine amidotransferase class-I 41 192 7.4E-16 T 11-10-2018 IPR017926 Glutamine amidotransferase AYJ52_02700 8d742b59839c772f16a38387be147f2f 242 Gene3D G3DSA:3.40.50.880 5 241 2.4E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_17110 12626dd58ed1aac515f3004a5f02ec81 156 SMART SM01034 3 96 1.5E-32 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AYJ52_17110 12626dd58ed1aac515f3004a5f02ec81 156 Pfam PF04940 Sensors of blue-light using FAD 4 95 2.3E-27 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AYJ52_17110 12626dd58ed1aac515f3004a5f02ec81 156 SUPERFAMILY SSF54975 1 132 1.11E-35 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AYJ52_17110 12626dd58ed1aac515f3004a5f02ec81 156 Gene3D G3DSA:3.30.70.100 2 138 6.7E-33 T 11-10-2018 AYJ52_07335 b777b9856e859f458e4de8d9ec99eced 73 SUPERFAMILY SSF50249 4 71 4.0E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_07335 b777b9856e859f458e4de8d9ec99eced 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 27.121 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AYJ52_07335 b777b9856e859f458e4de8d9ec99eced 73 Gene3D G3DSA:2.40.50.140 2 71 2.0E-37 T 11-10-2018 AYJ52_07335 b777b9856e859f458e4de8d9ec99eced 73 Pfam PF01176 Translation initiation factor 1A / IF-1 8 71 1.4E-28 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AYJ52_07335 b777b9856e859f458e4de8d9ec99eced 73 SMART SM00316 5 73 1.9E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 AYJ52_07335 b777b9856e859f458e4de8d9ec99eced 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 71 2.3E-38 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AYJ52_00145 537ca64cc8cbf0c4116bccb925979887 356 Pfam PF12698 ABC-2 family transporter protein 1 343 8.2E-27 T 11-10-2018 AYJ52_00145 537ca64cc8cbf0c4116bccb925979887 356 Gene3D G3DSA:3.40.1710.10 20 135 1.6E-6 T 11-10-2018 AYJ52_02750 e46b406fe11d24797b320f0d6044ebb3 329 Gene3D G3DSA:3.40.190.170 49 262 4.9E-13 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AYJ52_02750 e46b406fe11d24797b320f0d6044ebb3 329 SUPERFAMILY SSF53850 133 275 2.76E-8 T 11-10-2018 AYJ52_19725 6547648ba11b86dc807dbd964ecb670d 95 Gene3D G3DSA:3.10.450.530 1 90 2.5E-18 T 11-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily AYJ52_19725 6547648ba11b86dc807dbd964ecb670d 95 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 88 7.8E-27 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AYJ52_14525 a9e810f0b4f9730b43a4a1c1beaeef45 146 Gene3D G3DSA:1.10.3210.10 1 144 8.5E-21 T 11-10-2018 AYJ52_14525 a9e810f0b4f9730b43a4a1c1beaeef45 146 Pfam PF13328 HD domain 8 88 2.1E-8 T 11-10-2018 IPR003607 HD/PDEase domain AYJ52_14525 a9e810f0b4f9730b43a4a1c1beaeef45 146 SUPERFAMILY SSF109604 4 146 8.79E-22 T 11-10-2018 AYJ52_01300 3910b8b14db062cc0551a88c8226c36c 192 SUPERFAMILY SSF52317 1 186 6.21E-48 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_01300 3910b8b14db062cc0551a88c8226c36c 192 Pfam PF01965 DJ-1/PfpI family 3 184 3.5E-50 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AYJ52_01300 3910b8b14db062cc0551a88c8226c36c 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 186 9.4E-54 T 11-10-2018 IPR006286 Deglycase PfpI AYJ52_01300 3910b8b14db062cc0551a88c8226c36c 192 Gene3D G3DSA:3.40.50.880 1 191 3.5E-51 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_17280 557fe1e158c1c850d7bc3c726a2c6bf4 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 3.3E-90 T 11-10-2018 IPR005583 Peroxide stress protein YaaA AYJ52_17280 557fe1e158c1c850d7bc3c726a2c6bf4 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 36.98 T 11-10-2018 IPR005583 Peroxide stress protein YaaA AYJ52_03175 1dbe17bba59f013262abba7fbd980be4 64 Gene3D G3DSA:1.10.10.1100 1 57 2.3E-23 T 11-10-2018 AYJ52_03175 1dbe17bba59f013262abba7fbd980be4 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 1.3E-14 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AYJ52_12120 2dbed99ca536cadfb667b7de2f956107 151 Pfam PF00583 Acetyltransferase (GNAT) family 43 134 9.1E-18 T 11-10-2018 IPR000182 GNAT domain AYJ52_12120 2dbed99ca536cadfb667b7de2f956107 151 SUPERFAMILY SSF55729 6 135 6.55E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_12120 2dbed99ca536cadfb667b7de2f956107 151 Gene3D G3DSA:3.40.630.30 3 147 5.3E-38 T 11-10-2018 AYJ52_04665 747ec33baf40f15f30273ff1bf2916f2 152 PIRSF PIRSF006173 3 152 7.4E-65 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AYJ52_04665 747ec33baf40f15f30273ff1bf2916f2 152 Pfam PF03692 Putative zinc- or iron-chelating domain 29 97 9.9E-8 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AYJ52_04665 747ec33baf40f15f30273ff1bf2916f2 152 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 7 152 36.82 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AYJ52_10970 599d4e8608c9229c807151b385c0accd 129 Gene3D G3DSA:3.10.129.10 3 129 1.2E-25 T 11-10-2018 AYJ52_10970 599d4e8608c9229c807151b385c0accd 129 SUPERFAMILY SSF54637 5 129 6.61E-26 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_10970 599d4e8608c9229c807151b385c0accd 129 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 12 123 2.9E-12 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AYJ52_10970 599d4e8608c9229c807151b385c0accd 129 Pfam PF03061 Thioesterase superfamily 45 115 9.9E-12 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AYJ52_06170 0f2936ea6b85b6e90136688ef13d4b17 363 Pfam PF06527 TniQ 15 149 2.8E-19 T 11-10-2018 IPR009492 TniQ AYJ52_19170 64e72902760187a24186957b9cd4555e 406 Pfam PF15978 Tn7-like transposition protein D 94 197 1.2E-10 T 11-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl AYJ52_19170 64e72902760187a24186957b9cd4555e 406 Pfam PF15978 Tn7-like transposition protein D 223 339 1.1E-16 T 11-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl AYJ52_06290 f36c07e257db5355e2ad1266346ce3b2 360 Pfam PF06114 IrrE N-terminal-like domain 160 270 2.3E-20 T 11-10-2018 IPR010359 IrrE N-terminal-like domain AYJ52_06290 f36c07e257db5355e2ad1266346ce3b2 360 Pfam PF01381 Helix-turn-helix 13 63 7.9E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_06290 f36c07e257db5355e2ad1266346ce3b2 360 SMART SM00530 8 65 4.7E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AYJ52_06290 f36c07e257db5355e2ad1266346ce3b2 360 Gene3D G3DSA:1.10.260.40 7 103 9.7E-9 T 11-10-2018 AYJ52_06290 f36c07e257db5355e2ad1266346ce3b2 360 SUPERFAMILY SSF47413 6 66 4.22E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AYJ52_11920 63ce3276565d844c007eb133171cb24f 192 Pfam PF00665 Integrase core domain 38 153 2.6E-26 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_11920 63ce3276565d844c007eb133171cb24f 192 Gene3D G3DSA:3.30.420.10 33 185 1.9E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_11920 63ce3276565d844c007eb133171cb24f 192 SUPERFAMILY SSF53098 33 192 3.19E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_18160 d6ce285fc7c86b5464e2ecf7c843b622 718 Gene3D G3DSA:1.20.1250.20 13 234 2.3E-7 T 11-10-2018 AYJ52_18160 d6ce285fc7c86b5464e2ecf7c843b622 718 Gene3D G3DSA:1.20.1250.20 319 424 2.4E-5 T 11-10-2018 AYJ52_18160 d6ce285fc7c86b5464e2ecf7c843b622 718 Pfam PF07690 Major Facilitator Superfamily 24 406 7.8E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_18160 d6ce285fc7c86b5464e2ecf7c843b622 718 SUPERFAMILY SSF103473 16 413 3.4E-17 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_05505 d5cac54f6767c2e9f6931475bff3c291 205 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 204 22.87 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AYJ52_05505 d5cac54f6767c2e9f6931475bff3c291 205 Pfam PF02525 Flavodoxin-like fold 1 202 1.1E-38 T 11-10-2018 IPR003680 Flavodoxin-like fold AYJ52_05505 d5cac54f6767c2e9f6931475bff3c291 205 SUPERFAMILY SSF52218 1 203 3.14E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_05505 d5cac54f6767c2e9f6931475bff3c291 205 Gene3D G3DSA:3.40.50.360 1 205 7.3E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_09500 6c96244614a24c7cbbaaeddba2490a70 219 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 16 218 41.707 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_09500 6c96244614a24c7cbbaaeddba2490a70 219 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 19 214 1.5E-77 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_09500 6c96244614a24c7cbbaaeddba2490a70 219 Gene3D G3DSA:3.90.870.10 7 218 5.0E-87 T 11-10-2018 AYJ52_09500 6c96244614a24c7cbbaaeddba2490a70 219 SUPERFAMILY SSF55821 17 217 1.74E-82 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AYJ52_09500 6c96244614a24c7cbbaaeddba2490a70 219 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 22 213 6.8E-81 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_10735 5429abbc0667a83379fd8570fe56dbab 441 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 76 274 2.1E-19 T 11-10-2018 IPR000477 Reverse transcriptase domain AYJ52_10735 5429abbc0667a83379fd8570fe56dbab 441 SUPERFAMILY SSF56672 19 280 3.81E-18 T 11-10-2018 AYJ52_12270 e3fc02396068e69454275a1dafcae3f2 240 Pfam PF07702 UTRA domain 94 230 1.1E-30 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AYJ52_12270 e3fc02396068e69454275a1dafcae3f2 240 Gene3D G3DSA:3.40.1410.10 78 237 2.4E-30 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AYJ52_12270 e3fc02396068e69454275a1dafcae3f2 240 SUPERFAMILY SSF64288 61 238 9.11E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AYJ52_12270 e3fc02396068e69454275a1dafcae3f2 240 Gene3D G3DSA:1.10.10.10 8 77 8.5E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_12270 e3fc02396068e69454275a1dafcae3f2 240 SMART SM00866 94 233 1.6E-25 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AYJ52_12270 e3fc02396068e69454275a1dafcae3f2 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12270 e3fc02396068e69454275a1dafcae3f2 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12270 e3fc02396068e69454275a1dafcae3f2 240 SMART SM00345 14 73 4.3E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_12270 e3fc02396068e69454275a1dafcae3f2 240 SUPERFAMILY SSF46785 4 80 1.43E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12270 e3fc02396068e69454275a1dafcae3f2 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 73 1.1E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 Gene3D G3DSA:2.40.30.10 28 127 2.4E-12 T 11-10-2018 AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 Pfam PF00970 Oxidoreductase FAD-binding domain 36 127 7.1E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 129 6.4E-6 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 PRINTS PR00409 Phthalate dioxygenase reductase family signature 218 226 6.4E-6 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 PRINTS PR00409 Phthalate dioxygenase reductase family signature 137 156 6.4E-6 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 SUPERFAMILY SSF54292 242 341 2.02E-13 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 SUPERFAMILY SSF52343 118 241 6.42E-23 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 Gene3D G3DSA:3.10.20.30 257 341 1.6E-9 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 SUPERFAMILY SSF63380 24 130 4.3E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 Gene3D G3DSA:3.40.50.80 128 256 8.2E-26 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ52_05240 a1d6bc7b0ee2a69a0471f8890acd37ab 341 Pfam PF00175 Oxidoreductase NAD-binding domain 138 231 2.9E-11 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AYJ52_09395 fcc3c2bc09d3adcce72690de6688cf84 415 Gene3D G3DSA:1.20.1250.20 232 411 4.9E-21 T 11-10-2018 AYJ52_09395 fcc3c2bc09d3adcce72690de6688cf84 415 Gene3D G3DSA:1.20.1250.20 38 219 4.1E-18 T 11-10-2018 AYJ52_09395 fcc3c2bc09d3adcce72690de6688cf84 415 Pfam PF07690 Major Facilitator Superfamily 42 248 1.2E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_09395 fcc3c2bc09d3adcce72690de6688cf84 415 PRINTS PR00342 Rhesus blood group protein signature 388 404 7.1E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AYJ52_09395 fcc3c2bc09d3adcce72690de6688cf84 415 PRINTS PR00342 Rhesus blood group protein signature 99 117 7.1E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AYJ52_09395 fcc3c2bc09d3adcce72690de6688cf84 415 PRINTS PR00342 Rhesus blood group protein signature 190 206 7.1E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AYJ52_09395 fcc3c2bc09d3adcce72690de6688cf84 415 SUPERFAMILY SSF103473 40 413 1.27E-40 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_10100 544781605d02859e7c5f58f54439b3c4 332 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 174 9.6E-42 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AYJ52_10100 544781605d02859e7c5f58f54439b3c4 332 Gene3D G3DSA:3.40.50.300 7 204 2.9E-47 T 11-10-2018 AYJ52_10100 544781605d02859e7c5f58f54439b3c4 332 SUPERFAMILY SSF52540 10 194 3.39E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_15340 7cec9b7493ec824109bf2fd2bb41f768 137 SUPERFAMILY SSF54736 51 135 5.07E-31 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AYJ52_15340 7cec9b7493ec824109bf2fd2bb41f768 137 Gene3D G3DSA:3.30.1390.10 31 137 2.6E-40 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AYJ52_15340 7cec9b7493ec824109bf2fd2bb41f768 137 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 53 131 1.7E-32 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AYJ52_15340 7cec9b7493ec824109bf2fd2bb41f768 137 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 48 131 27.783 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AYJ52_04190 4de1daf8b2b9fd9f14b4a0db0058c31d 303 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 143 155 - T 11-10-2018 IPR033140 Lipase, GDXG, putative serine active site AYJ52_04190 4de1daf8b2b9fd9f14b4a0db0058c31d 303 Pfam PF07859 alpha/beta hydrolase fold 75 277 7.8E-58 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AYJ52_04190 4de1daf8b2b9fd9f14b4a0db0058c31d 303 Gene3D G3DSA:3.40.50.1820 38 300 1.3E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04190 4de1daf8b2b9fd9f14b4a0db0058c31d 303 SUPERFAMILY SSF53474 28 297 1.0E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04190 4de1daf8b2b9fd9f14b4a0db0058c31d 303 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 75 91 - T 11-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 AYJ52_07555 065901dee49f20ad4edbc4682499349b 256 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 13 249 15.561 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AYJ52_07555 065901dee49f20ad4edbc4682499349b 256 Pfam PF00902 Sec-independent protein translocase protein (TatC) 23 232 1.2E-59 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AYJ52_07555 065901dee49f20ad4edbc4682499349b 256 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 20 237 2.0E-63 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AYJ52_07555 065901dee49f20ad4edbc4682499349b 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 19 46 3.3E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AYJ52_07555 065901dee49f20ad4edbc4682499349b 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 114 3.3E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AYJ52_07555 065901dee49f20ad4edbc4682499349b 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 165 193 3.3E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AYJ52_07555 065901dee49f20ad4edbc4682499349b 256 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 114 140 3.3E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AYJ52_12965 40f3fe47e56241f9d8cb233229c07d7a 129 SUPERFAMILY SSF55331 4 121 3.26E-33 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AYJ52_12965 40f3fe47e56241f9d8cb233229c07d7a 129 Pfam PF14552 Tautomerase enzyme 38 114 2.0E-25 T 11-10-2018 IPR037479 Tautomerase, MSAD family AYJ52_12965 40f3fe47e56241f9d8cb233229c07d7a 129 Gene3D G3DSA:3.30.429.10 2 129 4.2E-42 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AYJ52_07820 e9da33319f6c10930147ac252811e156 431 SUPERFAMILY SSF51905 5 374 7.5E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_07820 e9da33319f6c10930147ac252811e156 431 Pfam PF01494 FAD binding domain 7 187 1.4E-16 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AYJ52_07820 e9da33319f6c10930147ac252811e156 431 Gene3D G3DSA:3.50.50.60 4 429 1.4E-126 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_13400 c6ac114df98f668f30b6f0ea20f793f0 813 Pfam PF04453 Organic solvent tolerance protein 343 720 3.5E-84 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AYJ52_13400 c6ac114df98f668f30b6f0ea20f793f0 813 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 12 787 19.267 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AYJ52_13400 c6ac114df98f668f30b6f0ea20f793f0 813 Pfam PF03968 OstA-like protein 104 236 4.9E-9 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AYJ52_07865 b6c1ac370c6b023c21cbad2ddcc6f80b 85 Gene3D G3DSA:3.40.30.10 2 85 6.7E-30 T 11-10-2018 AYJ52_07865 b6c1ac370c6b023c21cbad2ddcc6f80b 85 ProSitePatterns PS00195 Glutaredoxin active site. 7 23 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AYJ52_07865 b6c1ac370c6b023c21cbad2ddcc6f80b 85 PRINTS PR00160 Glutaredoxin signature 48 61 1.7E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup AYJ52_07865 b6c1ac370c6b023c21cbad2ddcc6f80b 85 PRINTS PR00160 Glutaredoxin signature 5 23 1.7E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup AYJ52_07865 b6c1ac370c6b023c21cbad2ddcc6f80b 85 PRINTS PR00160 Glutaredoxin signature 62 75 1.7E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup AYJ52_07865 b6c1ac370c6b023c21cbad2ddcc6f80b 85 Pfam PF00462 Glutaredoxin 5 65 1.3E-21 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AYJ52_07865 b6c1ac370c6b023c21cbad2ddcc6f80b 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 5 84 1.7E-31 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AYJ52_07865 b6c1ac370c6b023c21cbad2ddcc6f80b 85 SUPERFAMILY SSF52833 3 84 3.54E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_00855 4805604bb12efba8e399ef3ec05ae5dc 396 SUPERFAMILY SSF51197 146 386 6.73E-50 T 11-10-2018 AYJ52_00855 4805604bb12efba8e399ef3ec05ae5dc 396 SMART SM00558 241 393 1.8E-6 T 11-10-2018 IPR003347 JmjC domain AYJ52_00855 4805604bb12efba8e399ef3ec05ae5dc 396 Gene3D G3DSA:2.60.120.650 140 392 1.4E-63 T 11-10-2018 AYJ52_00855 4805604bb12efba8e399ef3ec05ae5dc 396 Pfam PF13621 Cupin-like domain 157 379 2.1E-42 T 11-10-2018 AYJ52_18230 5447076e9eddb550c5dbe900eade493a 729 Gene3D G3DSA:2.60.40.10 422 498 1.1E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_18230 5447076e9eddb550c5dbe900eade493a 729 Gene3D G3DSA:2.60.40.10 337 414 3.7E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_18230 5447076e9eddb550c5dbe900eade493a 729 Gene3D G3DSA:2.60.40.10 252 329 7.5E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_18230 5447076e9eddb550c5dbe900eade493a 729 Gene3D G3DSA:2.60.40.10 167 243 4.5E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_18230 5447076e9eddb550c5dbe900eade493a 729 Gene3D G3DSA:2.60.40.10 514 610 1.1E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold AYJ52_05765 a0d72040ad7387e66db466aa672c04e5 135 Gene3D G3DSA:3.30.300.20 4 134 5.5E-25 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AYJ52_05765 a0d72040ad7387e66db466aa672c04e5 135 Pfam PF02566 OsmC-like protein 38 129 4.2E-14 T 11-10-2018 IPR003718 OsmC/Ohr family AYJ52_05765 a0d72040ad7387e66db466aa672c04e5 135 SUPERFAMILY SSF82784 16 132 1.31E-23 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AYJ52_17210 086e855476835a08cfd64fe576520fbb 159 SUPERFAMILY SSF103054 93 158 1.7E-5 T 11-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily AYJ52_17210 086e855476835a08cfd64fe576520fbb 159 Pfam PF04612 Type II secretion system (T2SS), protein M 16 158 2.9E-13 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AYJ52_15995 84297b75db463acebccc427e6344913d 351 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 24 311 2.0E-48 T 11-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal AYJ52_15995 84297b75db463acebccc427e6344913d 351 Gene3D G3DSA:3.60.60.10 24 350 3.9E-128 T 11-10-2018 AYJ52_15995 84297b75db463acebccc427e6344913d 351 SUPERFAMILY SSF56235 24 329 1.0E-97 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_14960 3b79dfb95ebe1c2f5188c3547d806132 332 Gene3D G3DSA:3.90.850.10 108 320 3.6E-12 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AYJ52_14960 3b79dfb95ebe1c2f5188c3547d806132 332 SUPERFAMILY SSF56529 116 312 2.2E-24 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AYJ52_14960 3b79dfb95ebe1c2f5188c3547d806132 332 PIRSF PIRSF033905 1 329 2.5E-157 T 11-10-2018 IPR009645 Uncharacterised conserved protein GguC AYJ52_15470 a8fd9d8a07fb12365c9414587c3e957a 124 Pfam PF11042 Protein of unknown function (DUF2750) 19 111 7.6E-16 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 AYJ52_06725 ca434626a04132ee11569b28ff8f92df 215 Gene3D G3DSA:3.40.50.1820 17 214 7.7E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_06725 ca434626a04132ee11569b28ff8f92df 215 Pfam PF06821 Serine hydrolase 34 209 5.3E-25 T 11-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 AYJ52_06725 ca434626a04132ee11569b28ff8f92df 215 SUPERFAMILY SSF53474 31 210 1.37E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_12050 cb3ba6212f028602a60bb34042683322 319 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 10 102 2.8E-17 T 11-10-2018 IPR017748 T6S-associated protein TagF AYJ52_12050 cb3ba6212f028602a60bb34042683322 319 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 10 131 6.2E-27 T 11-10-2018 IPR017748 T6S-associated protein TagF AYJ52_12050 cb3ba6212f028602a60bb34042683322 319 Gene3D G3DSA:3.40.1730.10 6 116 5.3E-13 T 11-10-2018 IPR038225 T6S-associated protein TagF superfamily AYJ52_07250 61712b47de04b8d08db5f2a241652aad 225 Pfam PF07077 Protein of unknown function (DUF1345) 40 214 2.2E-60 T 11-10-2018 IPR009781 Protein of unknown function DUF1345 AYJ52_10115 458dc30cd0cb8e4afc70013e6693bb96 112 Gene3D G3DSA:3.10.50.40 1 112 1.3E-43 T 11-10-2018 AYJ52_10115 458dc30cd0cb8e4afc70013e6693bb96 112 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 16 105 1.7E-33 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ52_10115 458dc30cd0cb8e4afc70013e6693bb96 112 SUPERFAMILY SSF54534 3 110 1.12E-40 T 11-10-2018 AYJ52_04145 516da65b9918fc7034bf7e40fbb601b2 365 Gene3D G3DSA:3.40.50.2000 187 349 2.9E-46 T 11-10-2018 AYJ52_04145 516da65b9918fc7034bf7e40fbb601b2 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 195 354 2.4E-36 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AYJ52_04145 516da65b9918fc7034bf7e40fbb601b2 365 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 6 362 1.6E-104 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_04145 516da65b9918fc7034bf7e40fbb601b2 365 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 12 148 5.7E-42 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_04145 516da65b9918fc7034bf7e40fbb601b2 365 SUPERFAMILY SSF53756 10 364 2.9E-115 T 11-10-2018 AYJ52_04145 516da65b9918fc7034bf7e40fbb601b2 365 Gene3D G3DSA:3.40.50.2000 9 186 8.9E-62 T 11-10-2018 AYJ52_04145 516da65b9918fc7034bf7e40fbb601b2 365 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 12 365 34.285 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AYJ52_12550 099f547f6531b15486cc34bc3e33b324 203 Pfam PF01810 LysE type translocator 16 200 1.7E-23 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_13340 0244e811e34d5c69e128976cd0409c4e 178 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 178 1.6E-52 T 11-10-2018 IPR018636 Protein of unknown function DUF2058 AYJ52_05325 7b1015ce9caddc50436cb668c232b43d 257 Pfam PF00535 Glycosyl transferase family 2 43 122 5.5E-7 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AYJ52_05325 7b1015ce9caddc50436cb668c232b43d 257 Gene3D G3DSA:3.90.550.10 28 199 1.2E-14 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_05325 7b1015ce9caddc50436cb668c232b43d 257 SUPERFAMILY SSF53448 43 251 2.03E-17 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_03600 2b4c3c9f3b7e857f638ee2e298a74ae6 625 Pfam PF02705 K+ potassium transporter 15 546 9.3E-205 T 11-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AYJ52_03600 2b4c3c9f3b7e857f638ee2e298a74ae6 625 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 6 625 33.543 T 11-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup AYJ52_04395 1d7ab7f12f7cbda49dab96e3f2b9501b 283 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 56 280 9.1E-68 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AYJ52_04395 1d7ab7f12f7cbda49dab96e3f2b9501b 283 Pfam PF02666 Phosphatidylserine decarboxylase 69 280 2.0E-59 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AYJ52_04395 1d7ab7f12f7cbda49dab96e3f2b9501b 283 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 16 283 42.597 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AYJ52_19450 a427448fd21f962564acf0f1ae20d39f 211 Pfam PF01435 Peptidase family M48 36 194 9.6E-30 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AYJ52_19450 a427448fd21f962564acf0f1ae20d39f 211 Gene3D G3DSA:3.30.2010.10 12 96 1.4E-6 T 11-10-2018 AYJ52_05065 e8256eb167a3a2db62ee6b0cf58bb6fc 288 SUPERFAMILY SSF56281 39 246 1.96E-30 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_05065 e8256eb167a3a2db62ee6b0cf58bb6fc 288 SMART SM00849 41 222 4.3E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_05065 e8256eb167a3a2db62ee6b0cf58bb6fc 288 Gene3D G3DSA:3.60.15.10 26 257 3.8E-21 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_10955 f018b6ff70639454868edb25b9143698 528 Pfam PF00171 Aldehyde dehydrogenase family 37 467 5.1E-46 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_10955 f018b6ff70639454868edb25b9143698 528 Gene3D G3DSA:3.40.309.10 267 456 1.2E-195 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_10955 f018b6ff70639454868edb25b9143698 528 Gene3D G3DSA:3.40.605.10 44 521 1.2E-195 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_10955 f018b6ff70639454868edb25b9143698 528 SUPERFAMILY SSF53720 24 521 1.7E-91 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_14955 552aa725ede4e70dbee36f59648a6fa2 524 Gene3D G3DSA:3.40.309.10 265 452 1.0E-200 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AYJ52_14955 552aa725ede4e70dbee36f59648a6fa2 524 SUPERFAMILY SSF53720 20 516 3.67E-99 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AYJ52_14955 552aa725ede4e70dbee36f59648a6fa2 524 Gene3D G3DSA:3.40.605.10 42 517 1.0E-200 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AYJ52_14955 552aa725ede4e70dbee36f59648a6fa2 524 Pfam PF00171 Aldehyde dehydrogenase family 17 456 2.6E-48 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AYJ52_18210 105207a0a18e8c3bd37edd9f806a8f17 377 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 367 38.885 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AYJ52_18210 105207a0a18e8c3bd37edd9f806a8f17 377 Gene3D G3DSA:2.30.30.280 215 282 2.8E-25 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AYJ52_18210 105207a0a18e8c3bd37edd9f806a8f17 377 Gene3D G3DSA:2.40.30.10 284 374 6.2E-28 T 11-10-2018 AYJ52_18210 105207a0a18e8c3bd37edd9f806a8f17 377 Gene3D G3DSA:3.40.50.620 1 214 1.5E-88 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ52_18210 105207a0a18e8c3bd37edd9f806a8f17 377 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3 366 1.4E-132 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AYJ52_18210 105207a0a18e8c3bd37edd9f806a8f17 377 Pfam PF03054 tRNA methyl transferase 3 366 9.1E-133 T 11-10-2018 AYJ52_18210 105207a0a18e8c3bd37edd9f806a8f17 377 SUPERFAMILY SSF52402 2 245 5.07E-55 T 11-10-2018 AYJ52_16490 c4c974a767ad87852b34e1105d53c836 399 Gene3D G3DSA:1.20.1250.20 213 398 1.8E-19 T 11-10-2018 AYJ52_16490 c4c974a767ad87852b34e1105d53c836 399 Gene3D G3DSA:1.20.1250.20 15 212 8.0E-28 T 11-10-2018 AYJ52_16490 c4c974a767ad87852b34e1105d53c836 399 SUPERFAMILY SSF103473 12 390 3.4E-60 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_16490 c4c974a767ad87852b34e1105d53c836 399 Pfam PF07690 Major Facilitator Superfamily 23 333 1.7E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_14850 f2b78bc692ec495fb563b4fa0781f4fb 353 SMART SM00849 85 260 9.4E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_14850 f2b78bc692ec495fb563b4fa0781f4fb 353 SUPERFAMILY SSF56281 66 281 2.84E-29 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_14850 f2b78bc692ec495fb563b4fa0781f4fb 353 Pfam PF00753 Metallo-beta-lactamase superfamily 88 225 2.9E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_14850 f2b78bc692ec495fb563b4fa0781f4fb 353 Gene3D G3DSA:3.60.15.10 69 286 3.3E-29 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_09720 94d3f03fd74083128242aa5450118cf8 293 Pfam PF10118 Predicted metal-dependent hydrolase 17 279 1.7E-80 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_09720 94d3f03fd74083128242aa5450118cf8 293 PIRSF PIRSF007580 2 292 3.5E-72 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_02630 275d1aef025d956eb61287b6026a2873 178 SUPERFAMILY SSF55282 1 178 4.47E-77 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02630 275d1aef025d956eb61287b6026a2873 178 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.2E-42 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02630 275d1aef025d956eb61287b6026a2873 178 PIRSF PIRSF002161 1 178 1.4E-67 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02630 275d1aef025d956eb61287b6026a2873 178 Gene3D G3DSA:3.30.1440.10 1 178 5.1E-79 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02630 275d1aef025d956eb61287b6026a2873 178 Pfam PF00281 Ribosomal protein L5 24 80 7.7E-27 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02630 275d1aef025d956eb61287b6026a2873 178 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 42.276 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02630 275d1aef025d956eb61287b6026a2873 178 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_16025 8fae6a3b6cf03076b147ad678b90d52f 75 SUPERFAMILY SSF55331 2 61 3.33E-12 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AYJ52_16025 8fae6a3b6cf03076b147ad678b90d52f 75 Pfam PF01361 Tautomerase enzyme 2 59 2.5E-12 T 11-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AYJ52_16025 8fae6a3b6cf03076b147ad678b90d52f 75 Gene3D G3DSA:3.30.429.10 2 61 1.2E-15 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AYJ52_04075 5f4000a2ee7c12067f6caab32e5747fb 265 SMART SM00849 32 229 1.6E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_04075 5f4000a2ee7c12067f6caab32e5747fb 265 Gene3D G3DSA:3.60.15.10 9 248 1.1E-35 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_04075 5f4000a2ee7c12067f6caab32e5747fb 265 SUPERFAMILY SSF56281 30 249 1.54E-32 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_04075 5f4000a2ee7c12067f6caab32e5747fb 265 Pfam PF00753 Metallo-beta-lactamase superfamily 31 229 7.1E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_04500 be20fe2c5cf9e44232ba268186f6218e 384 SUPERFAMILY SSF55874 221 332 4.3E-6 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_16815 4e84f962e0290dd56760c04186ab5651 290 Gene3D G3DSA:3.40.190.10 42 271 6.9E-77 T 11-10-2018 AYJ52_16815 4e84f962e0290dd56760c04186ab5651 290 SUPERFAMILY SSF53850 39 279 2.79E-66 T 11-10-2018 AYJ52_16815 4e84f962e0290dd56760c04186ab5651 290 Gene3D G3DSA:3.40.190.10 119 230 6.9E-77 T 11-10-2018 AYJ52_16815 4e84f962e0290dd56760c04186ab5651 290 Pfam PF03180 NLPA lipoprotein 43 278 9.5E-67 T 11-10-2018 IPR004872 Lipoprotein NlpA family AYJ52_04565 76d311f421a584e42542b56eadcc9efd 370 Pfam PF01757 Acyltransferase family 4 349 1.3E-30 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 4.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 4.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 4.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 3.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 Pfam PF00106 short chain dehydrogenase 12 204 1.5E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 PIRSF PIRSF000126 1 264 7.3E-77 T 11-10-2018 AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 Gene3D G3DSA:3.40.50.720 2 262 5.0E-65 T 11-10-2018 AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_03915 57fbb3dc1004f24c36f68d3bd618a1a1 268 SUPERFAMILY SSF51735 6 247 5.32E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14585 720424b8947122100d379af3c6c398cd 294 SUPERFAMILY SSF53271 14 130 2.72E-10 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AYJ52_14585 720424b8947122100d379af3c6c398cd 294 SMART SM01400 1 105 8.9E-4 T 11-10-2018 AYJ52_14585 720424b8947122100d379af3c6c398cd 294 SUPERFAMILY SSF53271 159 281 2.88E-18 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AYJ52_14585 720424b8947122100d379af3c6c398cd 294 Gene3D G3DSA:3.40.50.2020 8 142 2.5E-12 T 11-10-2018 AYJ52_14585 720424b8947122100d379af3c6c398cd 294 Gene3D G3DSA:3.40.50.2020 150 289 5.9E-23 T 11-10-2018 AYJ52_14585 720424b8947122100d379af3c6c398cd 294 Pfam PF00156 Phosphoribosyl transferase domain 153 255 1.1E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AYJ52_15430 92634e30d6b4f98d91061b83bd6de5e1 98 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 19 95 7.0E-25 T 11-10-2018 IPR011846 Cyd operon protein YbgE AYJ52_07800 0123055f94440eda0fb1d1b2294129c6 511 SUPERFAMILY SSF48557 3 504 2.2E-168 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AYJ52_07800 0123055f94440eda0fb1d1b2294129c6 511 Pfam PF00221 Aromatic amino acid lyase 11 472 1.1E-156 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AYJ52_07800 0123055f94440eda0fb1d1b2294129c6 511 Gene3D G3DSA:1.10.275.10 2 200 4.4E-60 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AYJ52_07800 0123055f94440eda0fb1d1b2294129c6 511 Gene3D G3DSA:1.20.200.10 201 502 3.8E-95 T 11-10-2018 AYJ52_07800 0123055f94440eda0fb1d1b2294129c6 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 141 157 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AYJ52_12970 40c77dff30ae6700777bc8fdb24ff04f 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 107 1.5E-9 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AYJ52_12665 53800477081918e1c4353f1f72cbb148 229 Pfam PF04172 LrgB-like family 12 224 1.8E-65 T 11-10-2018 IPR007300 CidB/LrgB family AYJ52_12735 2bf831062ce45a917df115315be5dd0d 133 Pfam PF03817 Malonate transporter MadL subunit 1 116 1.2E-41 T 11-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 AYJ52_12735 2bf831062ce45a917df115315be5dd0d 133 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 127 3.5E-57 T 11-10-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 AYJ52_06385 1192592bb0871743dc6a985daa36444a 515 Gene3D G3DSA:3.40.720.10 10 509 1.3E-209 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AYJ52_06385 1192592bb0871743dc6a985daa36444a 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 9 512 49.032 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_06385 1192592bb0871743dc6a985daa36444a 515 SUPERFAMILY SSF53649 11 511 1.44E-70 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AYJ52_06385 1192592bb0871743dc6a985daa36444a 515 PIRSF PIRSF001492 4 514 3.7E-198 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_06385 1192592bb0871743dc6a985daa36444a 515 Pfam PF01676 Metalloenzyme superfamily 11 499 8.4E-78 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AYJ52_06385 1192592bb0871743dc6a985daa36444a 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 11 511 3.3E-220 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_06385 1192592bb0871743dc6a985daa36444a 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 87 299 3.4E-77 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_06385 1192592bb0871743dc6a985daa36444a 515 Gene3D G3DSA:3.40.1450.10 82 312 1.3E-209 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_06385 1192592bb0871743dc6a985daa36444a 515 SUPERFAMILY SSF64158 82 310 1.57E-81 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AYJ52_09450 946eb549b157cb8267129ba985b9ce41 205 SUPERFAMILY SSF55821 3 203 3.36E-59 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AYJ52_09450 946eb549b157cb8267129ba985b9ce41 205 Pfam PF01300 Telomere recombination 22 197 1.1E-42 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AYJ52_09450 946eb549b157cb8267129ba985b9ce41 205 Gene3D G3DSA:3.90.870.10 2 205 4.0E-60 T 11-10-2018 AYJ52_09450 946eb549b157cb8267129ba985b9ce41 205 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 200 1.8E-59 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AYJ52_15505 c052e0f7be77cf83199677a5ad9aae10 433 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 1.8E-139 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AYJ52_15505 c052e0f7be77cf83199677a5ad9aae10 433 Pfam PF05525 Branched-chain amino acid transport protein 8 428 9.3E-142 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AYJ52_16875 ea22a78a0be6e1a8ed0c489a254a5ab7 193 Gene3D G3DSA:3.40.50.1820 1 193 1.1E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_16875 ea22a78a0be6e1a8ed0c489a254a5ab7 193 Pfam PF06821 Serine hydrolase 10 183 3.7E-46 T 11-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 AYJ52_16875 ea22a78a0be6e1a8ed0c489a254a5ab7 193 SUPERFAMILY SSF53474 8 181 8.28E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_13090 1399aa3c7b54215f7d2d820c8dbb3f8d 181 SMART SM00563 29 145 4.3E-17 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AYJ52_13090 1399aa3c7b54215f7d2d820c8dbb3f8d 181 Pfam PF01553 Acyltransferase 25 138 1.2E-12 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AYJ52_13090 1399aa3c7b54215f7d2d820c8dbb3f8d 181 SUPERFAMILY SSF69593 21 141 1.96E-15 T 11-10-2018 AYJ52_04730 47ffe13a80604b82f00a1bde65093179 217 PIRSF PIRSF039033 2 215 7.2E-43 T 11-10-2018 IPR028347 START domain-containing protein AYJ52_04730 47ffe13a80604b82f00a1bde65093179 217 Gene3D G3DSA:3.30.530.20 27 212 1.8E-48 T 11-10-2018 IPR023393 START-like domain superfamily AYJ52_04730 47ffe13a80604b82f00a1bde65093179 217 Pfam PF01852 START domain 37 191 7.7E-9 T 11-10-2018 IPR002913 START domain GO:0008289 AYJ52_04730 47ffe13a80604b82f00a1bde65093179 217 SUPERFAMILY SSF55961 15 201 1.45E-33 T 11-10-2018 AYJ52_09740 60069a5ad44b5272e9534f232b1ef0fe 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 77.134 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AYJ52_09740 60069a5ad44b5272e9534f232b1ef0fe 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 202 3.1E-62 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AYJ52_09740 60069a5ad44b5272e9534f232b1ef0fe 243 Gene3D G3DSA:3.40.630.70 60 238 9.7E-57 T 11-10-2018 AYJ52_09740 60069a5ad44b5272e9534f232b1ef0fe 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 214 5.1E-53 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AYJ52_09740 60069a5ad44b5272e9534f232b1ef0fe 243 SUPERFAMILY SSF55729 6 227 1.75E-80 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_09740 60069a5ad44b5272e9534f232b1ef0fe 243 Gene3D G3DSA:2.30.210.20 1 59 2.0E-21 T 11-10-2018 AYJ52_17370 89102d9f5cdd8538adf8c655d541e574 302 Hamap MF_00361 NAD kinase [nadK]. 9 290 32.407 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AYJ52_17370 89102d9f5cdd8538adf8c655d541e574 302 Pfam PF01513 ATP-NAD kinase 60 273 5.9E-63 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AYJ52_17370 89102d9f5cdd8538adf8c655d541e574 302 Gene3D G3DSA:3.40.50.10330 29 290 1.1E-89 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AYJ52_17370 89102d9f5cdd8538adf8c655d541e574 302 Gene3D G3DSA:2.60.200.30 131 267 1.1E-89 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AYJ52_17370 89102d9f5cdd8538adf8c655d541e574 302 SUPERFAMILY SSF111331 10 293 5.23E-87 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AYJ52_05605 6e94e28987ef5fbe2e87b258a59c988b 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 291 1.3E-118 T 11-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AYJ52_05605 6e94e28987ef5fbe2e87b258a59c988b 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 4.2E-51 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AYJ52_05605 6e94e28987ef5fbe2e87b258a59c988b 296 PIRSF PIRSF000103 1 295 2.4E-75 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AYJ52_05605 6e94e28987ef5fbe2e87b258a59c988b 296 Gene3D G3DSA:1.10.1040.10 164 294 3.0E-47 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AYJ52_05605 6e94e28987ef5fbe2e87b258a59c988b 296 Gene3D G3DSA:3.40.50.720 1 163 1.7E-59 T 11-10-2018 AYJ52_05605 6e94e28987ef5fbe2e87b258a59c988b 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 289 3.7E-36 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AYJ52_05605 6e94e28987ef5fbe2e87b258a59c988b 296 SUPERFAMILY SSF48179 162 291 2.04E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AYJ52_05605 6e94e28987ef5fbe2e87b258a59c988b 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AYJ52_05605 6e94e28987ef5fbe2e87b258a59c988b 296 SUPERFAMILY SSF51735 1 163 1.97E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14145 45c67957643f169d3d089d0f8a4e1c77 293 Gene3D G3DSA:1.10.10.10 1 90 1.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_14145 45c67957643f169d3d089d0f8a4e1c77 293 Gene3D G3DSA:3.40.190.290 91 292 2.6E-45 T 11-10-2018 AYJ52_14145 45c67957643f169d3d089d0f8a4e1c77 293 Pfam PF03466 LysR substrate binding domain 89 289 1.0E-38 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_14145 45c67957643f169d3d089d0f8a4e1c77 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14145 45c67957643f169d3d089d0f8a4e1c77 293 SUPERFAMILY SSF46785 1 83 6.16E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_14145 45c67957643f169d3d089d0f8a4e1c77 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14145 45c67957643f169d3d089d0f8a4e1c77 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14145 45c67957643f169d3d089d0f8a4e1c77 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_14145 45c67957643f169d3d089d0f8a4e1c77 293 SUPERFAMILY SSF53850 90 291 1.23E-37 T 11-10-2018 AYJ52_11675 60b9d44c3f2930a58b0f22afa8a01d77 488 SUPERFAMILY SSF56954 81 469 8.5E-64 T 11-10-2018 AYJ52_11675 60b9d44c3f2930a58b0f22afa8a01d77 488 Gene3D G3DSA:1.20.1600.10 82 480 2.2E-62 T 11-10-2018 AYJ52_11675 60b9d44c3f2930a58b0f22afa8a01d77 488 Pfam PF02321 Outer membrane efflux protein 293 468 2.1E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_11675 60b9d44c3f2930a58b0f22afa8a01d77 488 Pfam PF02321 Outer membrane efflux protein 84 263 7.1E-23 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AYJ52_03505 e1c43e765b3c3f296b0f50f8d9183e95 197 Gene3D G3DSA:3.30.230.40 1 91 7.0E-38 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AYJ52_03505 e1c43e765b3c3f296b0f50f8d9183e95 197 Gene3D G3DSA:3.30.230.40 92 197 1.5E-38 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AYJ52_03505 e1c43e765b3c3f296b0f50f8d9183e95 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 41.274 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AYJ52_03505 e1c43e765b3c3f296b0f50f8d9183e95 197 SUPERFAMILY SSF54211 90 180 3.04E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_03505 e1c43e765b3c3f296b0f50f8d9183e95 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AYJ52_03505 e1c43e765b3c3f296b0f50f8d9183e95 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AYJ52_03505 e1c43e765b3c3f296b0f50f8d9183e95 197 SUPERFAMILY SSF54211 4 88 1.77E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ52_03505 e1c43e765b3c3f296b0f50f8d9183e95 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 1.1E-63 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AYJ52_12860 b50646859caddde1ee92880e413e36de 348 Pfam PF01758 Sodium Bile acid symporter family 51 247 5.0E-62 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AYJ52_12860 b50646859caddde1ee92880e413e36de 348 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 6 334 6.0E-130 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AYJ52_12860 b50646859caddde1ee92880e413e36de 348 PIRSF PIRSF005508 1 348 1.5E-134 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AYJ52_12860 b50646859caddde1ee92880e413e36de 348 Gene3D G3DSA:1.20.1530.20 1 340 3.1E-25 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AYJ52_00530 ee45539cb3d853c4544adee1d23092a2 312 SMART SM00046 6 139 0.0016 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AYJ52_00530 ee45539cb3d853c4544adee1d23092a2 312 Gene3D G3DSA:2.60.200.40 139 296 5.9E-17 T 11-10-2018 AYJ52_00530 ee45539cb3d853c4544adee1d23092a2 312 SUPERFAMILY SSF111331 5 307 4.06E-55 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AYJ52_00530 ee45539cb3d853c4544adee1d23092a2 312 Pfam PF00781 Diacylglycerol kinase catalytic domain 7 134 5.1E-22 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AYJ52_00530 ee45539cb3d853c4544adee1d23092a2 312 Gene3D G3DSA:3.40.50.10330 2 138 9.5E-24 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AYJ52_12220 fa847e3ba59e7c1bd2a8e0d2c1ff4616 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 43 8.0E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_12220 fa847e3ba59e7c1bd2a8e0d2c1ff4616 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 3.2E-9 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_12220 fa847e3ba59e7c1bd2a8e0d2c1ff4616 201 Gene3D G3DSA:2.160.10.10 3 180 9.3E-52 T 11-10-2018 AYJ52_12220 fa847e3ba59e7c1bd2a8e0d2c1ff4616 201 SUPERFAMILY SSF51161 2 170 1.8E-41 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_17340 4021b2bac453cee99635d7bffef04c55 314 Gene3D G3DSA:3.40.50.1820 32 306 3.7E-70 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_17340 4021b2bac453cee99635d7bffef04c55 314 Pfam PF00756 Putative esterase 47 265 1.3E-24 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AYJ52_17340 4021b2bac453cee99635d7bffef04c55 314 SUPERFAMILY SSF53474 36 292 1.05E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15100 6cb5c87f137d316bc25181f17855fcd6 418 Gene3D G3DSA:2.40.160.10 28 418 2.0E-140 T 11-10-2018 IPR023614 Porin domain superfamily AYJ52_15100 6cb5c87f137d316bc25181f17855fcd6 418 Pfam PF03573 outer membrane porin, OprD family 36 417 1.9E-73 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AYJ52_06440 f58bf8349f64cb35363a1da5fe552ca6 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 5.2E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_06440 f58bf8349f64cb35363a1da5fe552ca6 617 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 5.2E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AYJ52_06440 f58bf8349f64cb35363a1da5fe552ca6 617 Pfam PF02421 Ferrous iron transport protein B 6 165 2.2E-56 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AYJ52_06440 f58bf8349f64cb35363a1da5fe552ca6 617 Pfam PF07664 Ferrous iron transport protein B C terminus 394 446 6.5E-13 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AYJ52_06440 f58bf8349f64cb35363a1da5fe552ca6 617 SUPERFAMILY SSF52540 5 170 4.28E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_06440 f58bf8349f64cb35363a1da5fe552ca6 617 Gene3D G3DSA:3.40.50.300 5 194 1.5E-43 T 11-10-2018 AYJ52_06440 f58bf8349f64cb35363a1da5fe552ca6 617 Pfam PF07670 Nucleoside recognition 283 374 1.2E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AYJ52_06440 f58bf8349f64cb35363a1da5fe552ca6 617 Pfam PF07670 Nucleoside recognition 451 587 1.1E-23 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AYJ52_16625 8ae61ebd95fac4ec196ccd7772287c5c 271 Gene3D G3DSA:1.10.8.10 2 81 4.7E-14 T 11-10-2018 AYJ52_16625 8ae61ebd95fac4ec196ccd7772287c5c 271 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 22 266 4.6E-86 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AYJ52_16625 8ae61ebd95fac4ec196ccd7772287c5c 271 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 270 40.094 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AYJ52_16625 8ae61ebd95fac4ec196ccd7772287c5c 271 SUPERFAMILY SSF53335 15 268 7.71E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_16625 8ae61ebd95fac4ec196ccd7772287c5c 271 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AYJ52_16625 8ae61ebd95fac4ec196ccd7772287c5c 271 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 270 1.6E-70 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AYJ52_16625 8ae61ebd95fac4ec196ccd7772287c5c 271 Gene3D G3DSA:3.40.50.150 83 270 5.9E-59 T 11-10-2018 AYJ52_16625 8ae61ebd95fac4ec196ccd7772287c5c 271 Pfam PF05175 Methyltransferase small domain 92 193 2.8E-18 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AYJ52_17520 f15980834e3d5f79a0c6e5904cff44b2 311 Pfam PF00005 ABC transporter 21 165 5.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_17520 f15980834e3d5f79a0c6e5904cff44b2 311 SUPERFAMILY SSF52540 4 228 1.96E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17520 f15980834e3d5f79a0c6e5904cff44b2 311 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_17520 f15980834e3d5f79a0c6e5904cff44b2 311 SMART SM00382 30 213 7.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_17520 f15980834e3d5f79a0c6e5904cff44b2 311 Gene3D G3DSA:3.40.50.300 1 236 2.8E-62 T 11-10-2018 AYJ52_10090 31288a836cc3b35bf8b299999da5a81e 171 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 7 102 1.9E-10 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AYJ52_10090 31288a836cc3b35bf8b299999da5a81e 171 SUPERFAMILY SSF54637 12 159 1.48E-44 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_10090 31288a836cc3b35bf8b299999da5a81e 171 Gene3D G3DSA:3.10.129.10 6 162 1.4E-57 T 11-10-2018 AYJ52_10090 31288a836cc3b35bf8b299999da5a81e 171 Pfam PF03061 Thioesterase superfamily 32 103 1.9E-18 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AYJ52_15145 aecc0732d64ee9f332a5fe2bcd84c3de 137 Pfam PF04143 Sulphur transport 9 127 2.6E-9 T 11-10-2018 IPR007272 Sulphur transport domain AYJ52_18385 a4c52faee9d3a4c8805dd579eca353ee 293 SUPERFAMILY SSF46785 3 110 1.69E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_18385 a4c52faee9d3a4c8805dd579eca353ee 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18385 a4c52faee9d3a4c8805dd579eca353ee 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18385 a4c52faee9d3a4c8805dd579eca353ee 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18385 a4c52faee9d3a4c8805dd579eca353ee 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.1E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_18385 a4c52faee9d3a4c8805dd579eca353ee 293 Pfam PF03466 LysR substrate binding domain 88 288 8.8E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_18385 a4c52faee9d3a4c8805dd579eca353ee 293 Gene3D G3DSA:1.10.10.10 1 80 5.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_18385 a4c52faee9d3a4c8805dd579eca353ee 293 SUPERFAMILY SSF53850 88 289 7.47E-36 T 11-10-2018 AYJ52_18385 a4c52faee9d3a4c8805dd579eca353ee 293 Gene3D G3DSA:3.40.190.290 91 291 2.1E-33 T 11-10-2018 AYJ52_05860 db3d7b677e607df47dbe9f924b882366 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 4.3E-41 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05860 db3d7b677e607df47dbe9f924b882366 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 17 89 2.0E-34 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05860 db3d7b677e607df47dbe9f924b882366 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.661 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05860 db3d7b677e607df47dbe9f924b882366 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 5.3E-30 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05860 db3d7b677e607df47dbe9f924b882366 139 Gene3D G3DSA:2.60.15.10 2 89 1.4E-29 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05860 db3d7b677e607df47dbe9f924b882366 139 Gene3D G3DSA:1.20.5.440 90 132 1.8E-7 T 11-10-2018 AYJ52_05860 db3d7b677e607df47dbe9f924b882366 139 SUPERFAMILY SSF51344 3 85 4.45E-25 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_05860 db3d7b677e607df47dbe9f924b882366 139 SUPERFAMILY SSF46604 87 135 1.33E-10 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AYJ52_09455 18b8b27d8e44f15402b02055d9e5e199 220 Pfam PF04315 Elongation factor P hydroxylase 53 213 8.7E-61 T 11-10-2018 IPR007411 Elongation factor P hydroxylase AYJ52_12240 b9a1399bc1dff203fecd5290a7297d1c 229 SUPERFAMILY SSF46689 48 104 1.18E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_12240 b9a1399bc1dff203fecd5290a7297d1c 229 Gene3D G3DSA:1.10.357.10 41 212 7.7E-16 T 11-10-2018 AYJ52_12240 b9a1399bc1dff203fecd5290a7297d1c 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 53 91 1.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 3.6E-82 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 Gene3D G3DSA:3.40.50.880 1 193 5.6E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.7E-13 T 11-10-2018 AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 8.7E-13 T 11-10-2018 AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 8.7E-13 T 11-10-2018 AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 SUPERFAMILY SSF52317 1 192 3.44E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 Pfam PF00117 Glutamine amidotransferase class-I 4 190 8.9E-53 T 11-10-2018 IPR017926 Glutamine amidotransferase AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-34 T 11-10-2018 AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-34 T 11-10-2018 AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-34 T 11-10-2018 AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-34 T 11-10-2018 AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-34 T 11-10-2018 AYJ52_17735 4238da3fe4f0f4ccc9b7bd3ffe7a7bc9 194 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.8E-34 T 11-10-2018 AYJ52_07135 9b4fa390de8bf30d8cee35ea5ea927fb 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 63 18.0 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AYJ52_07135 9b4fa390de8bf30d8cee35ea5ea927fb 64 Pfam PF03884 DNA gyrase inhibitor YacG 6 53 1.5E-22 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AYJ52_07135 9b4fa390de8bf30d8cee35ea5ea927fb 64 Gene3D G3DSA:3.30.50.10 2 62 3.2E-21 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 AYJ52_07135 9b4fa390de8bf30d8cee35ea5ea927fb 64 SUPERFAMILY SSF57716 2 60 7.7E-20 T 11-10-2018 AYJ52_07565 bb5ba169554fc4df9d7238ec79d78da1 72 Pfam PF02416 mttA/Hcf106 family 4 49 1.1E-12 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AYJ52_07565 bb5ba169554fc4df9d7238ec79d78da1 72 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 66 20.119 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AYJ52_07565 bb5ba169554fc4df9d7238ec79d78da1 72 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 6.4E-19 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AYJ52_18815 1b81c811a020fea904f38a487d9163b3 444 Gene3D G3DSA:3.30.1150.10 343 443 3.9E-18 T 11-10-2018 AYJ52_18815 1b81c811a020fea904f38a487d9163b3 444 SUPERFAMILY SSF74653 363 443 6.54E-16 T 11-10-2018 AYJ52_18815 1b81c811a020fea904f38a487d9163b3 444 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 376 427 3.8E-10 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AYJ52_18815 1b81c811a020fea904f38a487d9163b3 444 Pfam PF13103 TonB C terminal 365 426 3.2E-11 T 11-10-2018 AYJ52_18815 1b81c811a020fea904f38a487d9163b3 444 TIGRFAM TIGR02794 tolA_full: protein TolA 227 442 1.8E-25 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AYJ52_18815 1b81c811a020fea904f38a487d9163b3 444 TIGRFAM TIGR02794 tolA_full: protein TolA 14 248 2.6E-23 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AYJ52_18680 96c783fc97ea9b9b6df4b7fafd6ef6fb 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 266 1.4E-98 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AYJ52_18680 96c783fc97ea9b9b6df4b7fafd6ef6fb 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 7 270 2.1E-127 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AYJ52_18680 96c783fc97ea9b9b6df4b7fafd6ef6fb 277 SUPERFAMILY SSF161098 14 264 2.62E-57 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_18680 96c783fc97ea9b9b6df4b7fafd6ef6fb 277 Gene3D G3DSA:1.10.3720.10 13 272 5.3E-70 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_18680 96c783fc97ea9b9b6df4b7fafd6ef6fb 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 272 2.4E-30 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_12475 1ba202ecf8c25712054dccd70d1727b9 301 SUPERFAMILY SSF53850 94 299 8.87E-42 T 11-10-2018 AYJ52_12475 1ba202ecf8c25712054dccd70d1727b9 301 Gene3D G3DSA:3.40.190.10 95 296 3.9E-61 T 11-10-2018 AYJ52_12475 1ba202ecf8c25712054dccd70d1727b9 301 Gene3D G3DSA:3.40.190.10 167 268 3.9E-61 T 11-10-2018 AYJ52_12475 1ba202ecf8c25712054dccd70d1727b9 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 1.9E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_12475 1ba202ecf8c25712054dccd70d1727b9 301 Pfam PF03466 LysR substrate binding domain 94 298 8.6E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_12475 1ba202ecf8c25712054dccd70d1727b9 301 SUPERFAMILY SSF46785 10 115 3.77E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_12475 1ba202ecf8c25712054dccd70d1727b9 301 Gene3D G3DSA:1.10.10.10 8 94 1.1E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_13815 88713ac37062b60b22d250ce17744df7 522 SUPERFAMILY SSF53254 32 502 2.59E-48 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AYJ52_13815 88713ac37062b60b22d250ce17744df7 522 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 129 488 3.2E-10 T 11-10-2018 IPR000560 Histidine phosphatase superfamily, clade-2 AYJ52_03785 88685d4f8464788253d958d11f65dbcf 399 Pfam PF13102 Phage integrase SAM-like domain 129 193 5.0E-5 T 11-10-2018 IPR025269 Phage integrase SAM-like domain AYJ52_03785 88685d4f8464788253d958d11f65dbcf 399 Gene3D G3DSA:1.10.150.130 100 208 1.6E-20 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AYJ52_03785 88685d4f8464788253d958d11f65dbcf 399 Gene3D G3DSA:1.10.443.10 209 383 8.5E-38 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AYJ52_03785 88685d4f8464788253d958d11f65dbcf 399 SUPERFAMILY SSF56349 111 376 9.12E-62 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AYJ52_03785 88685d4f8464788253d958d11f65dbcf 399 Pfam PF00589 Phage integrase family 207 369 1.4E-28 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AYJ52_09130 14bd65c7d2166e58d820a2d3700ebab3 472 SMART SM00267 297 471 6.1E-52 T 11-10-2018 IPR000160 GGDEF domain AYJ52_09130 14bd65c7d2166e58d820a2d3700ebab3 472 SUPERFAMILY SSF55073 313 470 6.67E-43 T 11-10-2018 IPR029787 Nucleotide cyclase AYJ52_09130 14bd65c7d2166e58d820a2d3700ebab3 472 Pfam PF00990 Diguanylate cyclase, GGDEF domain 309 467 8.2E-44 T 11-10-2018 IPR000160 GGDEF domain AYJ52_09130 14bd65c7d2166e58d820a2d3700ebab3 472 Gene3D G3DSA:3.30.70.270 297 471 1.6E-50 T 11-10-2018 AYJ52_09130 14bd65c7d2166e58d820a2d3700ebab3 472 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 304 470 9.2E-47 T 11-10-2018 IPR000160 GGDEF domain AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 45.505 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 Gene3D G3DSA:2.30.30.30 115 195 9.8E-31 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 PIRSF PIRSF002158 10 274 1.7E-101 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 249 3.0E-53 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 SUPERFAMILY SSF50249 3 124 3.12E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 SUPERFAMILY SSF50104 126 269 1.2E-56 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.0E-33 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 SMART SM01382 124 251 1.1E-84 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 Gene3D G3DSA:4.10.950.10 196 273 7.5E-34 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 3.1E-125 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 SMART SM01383 42 118 4.6E-46 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02675 a17a1cacf8982e7ccfa44e240c822f8b 274 Gene3D G3DSA:2.40.50.140 1 114 8.7E-49 T 11-10-2018 AYJ52_06050 3858b10c6d4c9f60b255029141cfcc81 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 3.6E-7 T 11-10-2018 AYJ52_06050 3858b10c6d4c9f60b255029141cfcc81 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 3.6E-7 T 11-10-2018 AYJ52_06050 3858b10c6d4c9f60b255029141cfcc81 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 3.6E-7 T 11-10-2018 AYJ52_06050 3858b10c6d4c9f60b255029141cfcc81 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 3.6E-7 T 11-10-2018 AYJ52_06050 3858b10c6d4c9f60b255029141cfcc81 463 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 422 1.8E-79 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AYJ52_06050 3858b10c6d4c9f60b255029141cfcc81 463 Gene3D G3DSA:1.20.1720.10 16 216 5.6E-47 T 11-10-2018 AYJ52_06050 3858b10c6d4c9f60b255029141cfcc81 463 Gene3D G3DSA:1.20.1250.20 255 460 8.0E-17 T 11-10-2018 AYJ52_06050 3858b10c6d4c9f60b255029141cfcc81 463 Pfam PF07690 Major Facilitator Superfamily 22 412 1.9E-49 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_06050 3858b10c6d4c9f60b255029141cfcc81 463 SUPERFAMILY SSF103473 8 460 9.42E-65 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_07480 19fcac27bd7d43d5ca950ff285f813fb 230 Pfam PF13972 Bacterial transcriptional repressor 62 208 3.5E-38 T 11-10-2018 IPR025722 Bacterial transcriptional repressor TetR AYJ52_07480 19fcac27bd7d43d5ca950ff285f813fb 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 7.9E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_07480 19fcac27bd7d43d5ca950ff285f813fb 230 Gene3D G3DSA:1.10.357.10 5 219 2.4E-65 T 11-10-2018 AYJ52_07480 19fcac27bd7d43d5ca950ff285f813fb 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_07480 19fcac27bd7d43d5ca950ff285f813fb 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_07480 19fcac27bd7d43d5ca950ff285f813fb 230 SUPERFAMILY SSF46689 6 75 8.25E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_14920 d5aa1efaf660ccc5490f1c715a05c200 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 6.0E-11 T 11-10-2018 AYJ52_14920 d5aa1efaf660ccc5490f1c715a05c200 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 6.0E-11 T 11-10-2018 AYJ52_14920 d5aa1efaf660ccc5490f1c715a05c200 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 6.0E-11 T 11-10-2018 AYJ52_14920 d5aa1efaf660ccc5490f1c715a05c200 401 SUPERFAMILY SSF51905 1 328 1.44E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ52_14920 d5aa1efaf660ccc5490f1c715a05c200 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 313 3.9E-42 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AYJ52_14920 d5aa1efaf660ccc5490f1c715a05c200 401 Gene3D G3DSA:3.50.50.100 1 382 7.5E-75 T 11-10-2018 AYJ52_04545 0c996fa3adf25aa87108a14717b70451 512 Gene3D G3DSA:1.20.200.10 197 508 9.8E-128 T 11-10-2018 AYJ52_04545 0c996fa3adf25aa87108a14717b70451 512 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AYJ52_04545 0c996fa3adf25aa87108a14717b70451 512 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 503 45.313 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04545 0c996fa3adf25aa87108a14717b70451 512 SUPERFAMILY SSF48557 3 505 2.83E-194 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AYJ52_04545 0c996fa3adf25aa87108a14717b70451 512 Pfam PF00221 Aromatic amino acid lyase 10 469 6.9E-188 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AYJ52_04545 0c996fa3adf25aa87108a14717b70451 512 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 500 3.6E-223 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AYJ52_04545 0c996fa3adf25aa87108a14717b70451 512 Gene3D G3DSA:1.10.275.10 1 196 4.7E-70 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AYJ52_01060 6659abab3badacf8ef65718600635b67 303 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AYJ52_01060 6659abab3badacf8ef65718600635b67 303 Gene3D G3DSA:1.10.600.10 6 300 8.0E-88 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AYJ52_01060 6659abab3badacf8ef65718600635b67 303 Pfam PF00348 Polyprenyl synthetase 36 276 2.4E-56 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AYJ52_01060 6659abab3badacf8ef65718600635b67 303 SUPERFAMILY SSF48576 11 290 9.46E-79 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AYJ52_01615 9f95377f05081fcc01e5844ac6750a5a 96 Pfam PF00639 PPIC-type PPIASE domain 14 88 1.3E-20 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AYJ52_01615 9f95377f05081fcc01e5844ac6750a5a 96 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AYJ52_01615 9f95377f05081fcc01e5844ac6750a5a 96 Gene3D G3DSA:3.10.50.40 1 91 3.7E-31 T 11-10-2018 AYJ52_01615 9f95377f05081fcc01e5844ac6750a5a 96 SUPERFAMILY SSF54534 4 88 6.15E-27 T 11-10-2018 AYJ52_01595 ba9ee0ee2741057ed85b5863227a32a0 369 SUPERFAMILY SSF51395 1 361 6.41E-113 T 11-10-2018 AYJ52_01595 ba9ee0ee2741057ed85b5863227a32a0 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 9.4E-74 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AYJ52_01595 ba9ee0ee2741057ed85b5863227a32a0 369 Gene3D G3DSA:3.20.20.70 1 358 4.7E-121 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_11220 c635a771e3eeb765e518fc31e1a77107 164 SUPERFAMILY SSF142433 2 148 5.49E-25 T 11-10-2018 IPR036653 CinA-like, C-terminal AYJ52_11220 c635a771e3eeb765e518fc31e1a77107 164 Gene3D G3DSA:3.90.950.20 1 160 3.9E-28 T 11-10-2018 IPR036653 CinA-like, C-terminal AYJ52_11220 c635a771e3eeb765e518fc31e1a77107 164 Pfam PF02464 Competence-damaged protein 3 145 7.7E-22 T 11-10-2018 IPR008136 CinA, C-terminal AYJ52_16150 d94c0710f997c80cf416014c92295909 527 SMART SM00382 363 519 6.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_16150 d94c0710f997c80cf416014c92295909 527 SMART SM00382 30 335 1.1 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_16150 d94c0710f997c80cf416014c92295909 527 Pfam PF00005 ABC transporter 355 483 2.4E-14 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_16150 d94c0710f997c80cf416014c92295909 527 SUPERFAMILY SSF52540 342 516 2.84E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16150 d94c0710f997c80cf416014c92295909 527 Gene3D G3DSA:3.40.50.300 303 521 2.1E-29 T 11-10-2018 AYJ52_16150 d94c0710f997c80cf416014c92295909 527 Gene3D G3DSA:3.40.50.300 1 275 1.0E-43 T 11-10-2018 AYJ52_16150 d94c0710f997c80cf416014c92295909 527 SUPERFAMILY SSF52540 8 234 7.79E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_16150 d94c0710f997c80cf416014c92295909 527 Pfam PF00005 ABC transporter 22 173 1.6E-14 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_08830 a3b4a03e5b3f6bc84cd00aba95962295 331 Gene3D G3DSA:1.20.1510.10 207 329 1.2E-5 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_08830 a3b4a03e5b3f6bc84cd00aba95962295 331 SUPERFAMILY SSF161111 152 326 4.18E-30 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AYJ52_08830 a3b4a03e5b3f6bc84cd00aba95962295 331 SUPERFAMILY SSF55008 63 125 2.36E-6 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AYJ52_08830 a3b4a03e5b3f6bc84cd00aba95962295 331 Pfam PF01545 Cation efflux family 159 326 3.1E-13 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AYJ52_18070 d545b4574e0a13d412a9a484a00c9102 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 77 9.6E-6 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AYJ52_18070 d545b4574e0a13d412a9a484a00c9102 82 SUPERFAMILY SSF143120 12 68 2.49E-5 T 11-10-2018 IPR036165 YefM-like superfamily AYJ52_02625 82f9f9500b3745dadaafba5497eede75 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AYJ52_02625 82f9f9500b3745dadaafba5497eede75 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.835 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AYJ52_02625 82f9f9500b3745dadaafba5497eede75 101 Gene3D G3DSA:4.10.830.10 41 101 7.9E-22 T 11-10-2018 AYJ52_02625 82f9f9500b3745dadaafba5497eede75 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.4E-25 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AYJ52_02625 82f9f9500b3745dadaafba5497eede75 101 SUPERFAMILY SSF57716 2 101 9.98E-39 T 11-10-2018 AYJ52_00175 7ea4dc34043ca3842db46ec574909cd8 207 PIRSF PIRSF006324 1 207 2.2E-52 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_00175 7ea4dc34043ca3842db46ec574909cd8 207 Pfam PF01810 LysE type translocator 15 205 2.2E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_16415 e34dd6aa14b84d59b443400ce104e83f 217 SUPERFAMILY SSF55469 1 215 3.66E-62 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_16415 e34dd6aa14b84d59b443400ce104e83f 217 Pfam PF00881 Nitroreductase family 8 193 9.1E-25 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AYJ52_16415 e34dd6aa14b84d59b443400ce104e83f 217 Gene3D G3DSA:3.40.109.10 1 216 3.8E-58 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_07300 124f619e14c52ad954989b0f2835a2bc 67 Pfam PF09834 Predicted membrane protein (DUF2061) 16 66 5.4E-18 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane AYJ52_04360 a2cfe81924ac4aa67c28c09d1f281f39 223 Gene3D G3DSA:1.10.10.60 5 79 2.5E-11 T 11-10-2018 AYJ52_04360 a2cfe81924ac4aa67c28c09d1f281f39 223 Gene3D G3DSA:1.10.357.10 80 217 1.9E-10 T 11-10-2018 AYJ52_04360 a2cfe81924ac4aa67c28c09d1f281f39 223 SUPERFAMILY SSF48498 104 205 1.63E-5 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AYJ52_04360 a2cfe81924ac4aa67c28c09d1f281f39 223 SUPERFAMILY SSF46689 27 104 2.87E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_02215 5027e175b584b1b47ebfcb8179066ac6 147 Gene3D G3DSA:2.40.128.520 20 147 7.0E-18 T 11-10-2018 AYJ52_02215 5027e175b584b1b47ebfcb8179066ac6 147 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 25 145 1.7E-25 T 11-10-2018 IPR019223 Domain of unknown function DUF2147 AYJ52_08140 cd0ec0a68713944a490a53cc86d0811c 334 Gene3D G3DSA:1.10.3290.10 13 280 7.6E-56 T 11-10-2018 IPR036597 Fido-like domain superfamily AYJ52_08140 cd0ec0a68713944a490a53cc86d0811c 334 SUPERFAMILY SSF140931 78 248 1.44E-43 T 11-10-2018 IPR036597 Fido-like domain superfamily AYJ52_08140 cd0ec0a68713944a490a53cc86d0811c 334 Pfam PF02661 Fic/DOC family 101 196 4.6E-22 T 11-10-2018 IPR003812 Fido domain AYJ52_16670 9a94198487ad334a7f273c9372facc31 415 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 8 409 6.2E-174 T 11-10-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0043708 AYJ52_16670 9a94198487ad334a7f273c9372facc31 415 Pfam PF13641 Glycosyltransferase like family 2 49 269 1.9E-36 T 11-10-2018 AYJ52_16670 9a94198487ad334a7f273c9372facc31 415 SUPERFAMILY SSF53448 49 317 3.94E-59 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_16670 9a94198487ad334a7f273c9372facc31 415 Gene3D G3DSA:3.90.550.10 32 264 7.6E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AYJ52_12855 5c7a6a27816efc497b564872cce0292b 157 SMART SM00226 1 136 1.7E-34 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AYJ52_12855 5c7a6a27816efc497b564872cce0292b 157 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 134 3.4E-23 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AYJ52_12855 5c7a6a27816efc497b564872cce0292b 157 SUPERFAMILY SSF52788 1 135 2.75E-36 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AYJ52_12855 5c7a6a27816efc497b564872cce0292b 157 Gene3D G3DSA:3.40.50.2300 1 136 7.4E-37 T 11-10-2018 AYJ52_04820 5202a19bad7f948d6b79852cc307589e 198 Pfam PF00043 Glutathione S-transferase, C-terminal domain 120 188 2.2E-12 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AYJ52_04820 5202a19bad7f948d6b79852cc307589e 198 Gene3D G3DSA:1.20.1050.10 81 194 5.2E-38 T 11-10-2018 AYJ52_04820 5202a19bad7f948d6b79852cc307589e 198 Gene3D G3DSA:3.40.30.10 1 80 5.6E-24 T 11-10-2018 AYJ52_04820 5202a19bad7f948d6b79852cc307589e 198 SUPERFAMILY SSF47616 72 193 5.99E-26 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ52_04820 5202a19bad7f948d6b79852cc307589e 198 SUPERFAMILY SSF52833 1 85 1.67E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AYJ52_04820 5202a19bad7f948d6b79852cc307589e 198 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 75 3.4E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AYJ52_14220 24acf8e78700cabaaf022a21f6cf7de2 315 Pfam PF13557 Putative MetA-pathway of phenol degradation 60 311 4.2E-62 T 11-10-2018 IPR025737 MetA-pathway of phenol degradation, putative AYJ52_04445 00670e037e7664eee129bcdd73c84ed5 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 1.2E-53 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_04445 00670e037e7664eee129bcdd73c84ed5 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 30.904 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_04445 00670e037e7664eee129bcdd73c84ed5 156 Gene3D G3DSA:3.40.50.960 3 156 1.4E-58 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_04445 00670e037e7664eee129bcdd73c84ed5 156 SUPERFAMILY SSF52121 11 156 3.4E-59 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_04445 00670e037e7664eee129bcdd73c84ed5 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 153 5.3E-56 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AYJ52_00340 d366bb32ed185888788f466638a09720 124 Gene3D G3DSA:1.10.3830.10 8 124 4.6E-37 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AYJ52_00340 d366bb32ed185888788f466638a09720 124 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 122 4.9E-33 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AYJ52_03620 6f0723d270c18923c951b6e4fcdb1c47 93 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 42 86 1.2E-12 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AYJ52_17080 06a19633fecef2ef3bbc5dff4c0980d7 133 Pfam PF13781 DoxX-like family 15 114 1.1E-20 T 11-10-2018 IPR025695 DoxX-like family AYJ52_12740 6b05bdb022ec51902c19251afd91d42a 253 Pfam PF03818 Malonate/sodium symporter MadM subunit 2 60 2.2E-22 T 11-10-2018 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal AYJ52_12740 6b05bdb022ec51902c19251afd91d42a 253 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 3 253 1.5E-131 T 11-10-2018 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 AYJ52_17465 9542737147babcf5e280976b52fc85ca 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 6.6E-20 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AYJ52_17465 9542737147babcf5e280976b52fc85ca 229 Gene3D G3DSA:1.10.3720.10 2 223 4.4E-52 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_17465 9542737147babcf5e280976b52fc85ca 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 220 1.7E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_17465 9542737147babcf5e280976b52fc85ca 229 SUPERFAMILY SSF161098 8 206 3.53E-42 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_02770 baba3318fcb4be05c5f1e1b999fe1013 133 SUPERFAMILY SSF55811 3 127 3.25E-22 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AYJ52_02770 baba3318fcb4be05c5f1e1b999fe1013 133 Pfam PF00293 NUDIX domain 6 124 2.8E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AYJ52_02770 baba3318fcb4be05c5f1e1b999fe1013 133 Gene3D G3DSA:3.90.79.10 1 131 2.3E-22 T 11-10-2018 AYJ52_02770 baba3318fcb4be05c5f1e1b999fe1013 133 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AYJ52_08930 60cdfbb7a68fc824ea2b4b131ef3aac8 309 Gene3D G3DSA:1.10.10.10 1 90 1.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_08930 60cdfbb7a68fc824ea2b4b131ef3aac8 309 SUPERFAMILY SSF53850 87 296 4.89E-24 T 11-10-2018 AYJ52_08930 60cdfbb7a68fc824ea2b4b131ef3aac8 309 Gene3D G3DSA:3.40.190.290 91 297 2.9E-29 T 11-10-2018 AYJ52_08930 60cdfbb7a68fc824ea2b4b131ef3aac8 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.9E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AYJ52_08930 60cdfbb7a68fc824ea2b4b131ef3aac8 309 Pfam PF03466 LysR substrate binding domain 85 283 2.5E-23 T 11-10-2018 IPR005119 LysR, substrate-binding AYJ52_08930 60cdfbb7a68fc824ea2b4b131ef3aac8 309 SUPERFAMILY SSF46785 2 107 4.73E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_07815 8a9c5187fff9a207ac9a19ba82c60a04 771 SUPERFAMILY SSF82866 616 759 2.22E-22 T 11-10-2018 AYJ52_07815 8a9c5187fff9a207ac9a19ba82c60a04 771 SUPERFAMILY SSF82866 213 398 1.44E-16 T 11-10-2018 AYJ52_16495 963040e26850d64dbf60a5338b611077 327 SUPERFAMILY SSF81324 27 246 1.78E-47 T 11-10-2018 AYJ52_16495 963040e26850d64dbf60a5338b611077 327 PRINTS PR00169 Potassium channel signature 21 49 9.2E-35 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AYJ52_16495 963040e26850d64dbf60a5338b611077 327 PRINTS PR00169 Potassium channel signature 159 182 9.2E-35 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AYJ52_16495 963040e26850d64dbf60a5338b611077 327 PRINTS PR00169 Potassium channel signature 190 212 9.2E-35 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AYJ52_16495 963040e26850d64dbf60a5338b611077 327 PRINTS PR00169 Potassium channel signature 63 86 9.2E-35 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AYJ52_16495 963040e26850d64dbf60a5338b611077 327 PRINTS PR00169 Potassium channel signature 219 245 9.2E-35 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AYJ52_16495 963040e26850d64dbf60a5338b611077 327 PRINTS PR00169 Potassium channel signature 130 156 9.2E-35 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AYJ52_16495 963040e26850d64dbf60a5338b611077 327 Gene3D G3DSA:1.10.287.70 27 249 4.0E-58 T 11-10-2018 AYJ52_16495 963040e26850d64dbf60a5338b611077 327 Pfam PF00520 Ion transport protein 28 246 4.2E-30 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AYJ52_16635 5b2869b863a438d0f56110e28076807f 279 Gene3D G3DSA:3.40.50.880 5 279 3.0E-78 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_16635 5b2869b863a438d0f56110e28076807f 279 SUPERFAMILY SSF52317 24 278 7.64E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AYJ52_16635 5b2869b863a438d0f56110e28076807f 279 Pfam PF17124 ThiJ/PfpI family-like 45 180 2.1E-13 T 11-10-2018 IPR032633 ThiJ/PfpI family-like AYJ52_10980 fd71ba9279115c963f40effd96a4ba3d 416 Pfam PF03573 outer membrane porin, OprD family 20 415 2.7E-131 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AYJ52_10980 fd71ba9279115c963f40effd96a4ba3d 416 Gene3D G3DSA:2.40.160.10 12 416 1.3E-167 T 11-10-2018 IPR023614 Porin domain superfamily AYJ52_08615 ea02b971ed68515aa875d1b130f1fa47 934 Pfam PF10101 Predicted membrane protein (DUF2339) 187 921 9.1E-96 T 11-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane AYJ52_01685 2870099ddc88325ed5e3e4431fc4973b 161 PIRSF PIRSF030820 3 160 2.2E-32 T 11-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 AYJ52_01685 2870099ddc88325ed5e3e4431fc4973b 161 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 155 4.5E-31 T 11-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 AYJ52_19550 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Gene3D G3DSA:3.30.200.20 4 92 1.6E-7 T 11-10-2018 AYJ52_19550 894e1f0ad6ba9ed50160bb983b4c7ca4 294 SUPERFAMILY SSF56112 31 242 1.11E-22 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_19550 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Gene3D G3DSA:3.90.1200.10 103 292 1.5E-25 T 11-10-2018 AYJ52_19550 894e1f0ad6ba9ed50160bb983b4c7ca4 294 Pfam PF01636 Phosphotransferase enzyme family 27 245 2.3E-21 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AYJ52_03710 06b7def114994f70981fd6499cfdbf33 295 Pfam PF00892 EamA-like transporter family 6 149 1.5E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_03710 06b7def114994f70981fd6499cfdbf33 295 Pfam PF00892 EamA-like transporter family 157 289 5.7E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_03710 06b7def114994f70981fd6499cfdbf33 295 SUPERFAMILY SSF103481 45 152 3.2E-8 T 11-10-2018 AYJ52_03710 06b7def114994f70981fd6499cfdbf33 295 SUPERFAMILY SSF103481 192 292 5.1E-15 T 11-10-2018 AYJ52_14615 ec6dbc2e4b0855c452c8285cd6465bfb 339 Pfam PF01497 Periplasmic binding protein 53 285 1.0E-30 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AYJ52_14615 ec6dbc2e4b0855c452c8285cd6465bfb 339 SUPERFAMILY SSF53807 38 322 5.49E-48 T 11-10-2018 AYJ52_14615 ec6dbc2e4b0855c452c8285cd6465bfb 339 Gene3D G3DSA:3.40.50.1980 22 339 2.0E-59 T 11-10-2018 AYJ52_13545 2cb199ac0a53155a3a313bef1609d186 303 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 138 284 3.0E-53 T 11-10-2018 IPR005642 Lysine exporter LysO AYJ52_13545 2cb199ac0a53155a3a313bef1609d186 303 Pfam PF03956 Lysine exporter LysO 116 301 8.0E-51 T 11-10-2018 IPR005642 Lysine exporter LysO AYJ52_02870 5a0b0b30e1976a9eb8ae925b59aa5cc5 265 Pfam PF13566 Domain of unknown function (DUF4130 89 260 8.4E-48 T 11-10-2018 IPR025404 Domain of unknown function DUF4130 AYJ52_02870 5a0b0b30e1976a9eb8ae925b59aa5cc5 265 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 8 261 1.0E-77 T 11-10-2018 IPR023875 DNA metabolism protein, putative AYJ52_16725 561580316dcce48d03b49ab0025edf9d 292 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 277 1.6E-85 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AYJ52_16725 561580316dcce48d03b49ab0025edf9d 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site AYJ52_16725 561580316dcce48d03b49ab0025edf9d 292 Pfam PF01040 UbiA prenyltransferase family 18 267 6.8E-59 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AYJ52_16725 561580316dcce48d03b49ab0025edf9d 292 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 17.325 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AYJ52_16725 561580316dcce48d03b49ab0025edf9d 292 Gene3D G3DSA:1.10.357.140 13 164 3.5E-21 T 11-10-2018 AYJ52_04980 c2ccf4380e1be238535a3cf0936a3058 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.4E-125 T 11-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AYJ52_04980 c2ccf4380e1be238535a3cf0936a3058 386 SUPERFAMILY SSF56059 6 383 6.0E-75 T 11-10-2018 AYJ52_04980 c2ccf4380e1be238535a3cf0936a3058 386 Gene3D G3DSA:3.30.1490.330 258 342 4.2E-18 T 11-10-2018 AYJ52_04980 c2ccf4380e1be238535a3cf0936a3058 386 SUPERFAMILY SSF52440 173 274 5.75E-31 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AYJ52_16795 68393e2c02ffc688adb2a17446a89932 281 Pfam PF11906 Protein of unknown function (DUF3426) 138 278 3.0E-13 T 11-10-2018 IPR021834 Protein of unknown function DUF3426 AYJ52_16795 68393e2c02ffc688adb2a17446a89932 281 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 40 3.1E-9 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative AYJ52_13295 a4f82326ffc54d22c555fa3b11b23e55 155 SUPERFAMILY SSF81301 8 154 8.5E-31 T 11-10-2018 AYJ52_13295 a4f82326ffc54d22c555fa3b11b23e55 155 Gene3D G3DSA:3.30.460.10 4 155 4.5E-20 T 11-10-2018 AYJ52_13295 a4f82326ffc54d22c555fa3b11b23e55 155 Pfam PF04229 GrpB protein 7 154 2.8E-22 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase AYJ52_02385 1f95ec34aaf34dc47c0828acf977a8bc 201 SMART SM00702 21 194 1.1E-10 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AYJ52_02385 1f95ec34aaf34dc47c0828acf977a8bc 201 SUPERFAMILY SSF51197 13 198 4.74E-6 T 11-10-2018 AYJ52_02385 1f95ec34aaf34dc47c0828acf977a8bc 201 Gene3D G3DSA:2.60.120.620 11 198 1.2E-47 T 11-10-2018 AYJ52_02385 1f95ec34aaf34dc47c0828acf977a8bc 201 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 106 194 2.7E-21 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AYJ52_08645 cecabe64486b2548989d337af2676209 124 Pfam PF16309 Domian of unknown function (DUF4951) 42 124 9.0E-48 T 11-10-2018 IPR032538 Protein of unknown function DUF4951 AYJ52_08645 cecabe64486b2548989d337af2676209 124 Gene3D G3DSA:1.20.1280.230 18 124 3.5E-58 T 11-10-2018 AYJ52_13150 8af81d8ce504781ecc4bda920a23013e 208 Pfam PF04116 Fatty acid hydroxylase superfamily 5 147 5.5E-7 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AYJ52_16870 9d8a39b77d550c1c657997aa75825958 610 Pfam PF06980 Protein of unknown function (DUF1302) 39 610 6.1E-144 T 11-10-2018 IPR010727 Protein of unknown function DUF1302 AYJ52_04300 3a1116d3ba24ec0b54e3d48c0cb8de10 786 SUPERFAMILY SSF55166 716 783 7.14E-5 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AYJ52_10485 296592ed556eb1c9d89551a2d3616af2 100 SUPERFAMILY SSF54111 1 99 8.63E-45 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10485 296592ed556eb1c9d89551a2d3616af2 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-43 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10485 296592ed556eb1c9d89551a2d3616af2 100 Gene3D G3DSA:3.30.280.10 1 100 6.8E-46 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10485 296592ed556eb1c9d89551a2d3616af2 100 Pfam PF00547 Urease, gamma subunit 1 99 1.5E-45 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10485 296592ed556eb1c9d89551a2d3616af2 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.6E-51 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10485 296592ed556eb1c9d89551a2d3616af2 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.951 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_10485 296592ed556eb1c9d89551a2d3616af2 100 PIRSF PIRSF001223 1 100 7.3E-49 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AYJ52_07660 d9f2070252c369f34936ea96cb08f19d 452 PIRSF PIRSF002746 4 452 3.3E-157 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AYJ52_07660 d9f2070252c369f34936ea96cb08f19d 452 Pfam PF02447 GntP family permease 8 450 4.2E-158 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AYJ52_07660 d9f2070252c369f34936ea96cb08f19d 452 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 452 1.0E-147 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AYJ52_18250 9d9b6231f4d5d7ed64f77b1b14a76618 459 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 455 1.4E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_18250 9d9b6231f4d5d7ed64f77b1b14a76618 459 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 180 1.6E-34 T 11-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 AYJ52_18250 9d9b6231f4d5d7ed64f77b1b14a76618 459 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 165 454 1.7E-86 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AYJ52_18250 9d9b6231f4d5d7ed64f77b1b14a76618 459 Gene3D G3DSA:1.10.3720.10 224 457 1.6E-36 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_18250 9d9b6231f4d5d7ed64f77b1b14a76618 459 SUPERFAMILY SSF161098 204 446 4.32E-34 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_09000 8296dd1c4175f76b110fcf5a31cfcb35 328 Pfam PF08908 Domain of unknown function (DUF1852) 1 323 6.9E-188 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 AYJ52_09000 8296dd1c4175f76b110fcf5a31cfcb35 328 PIRSF PIRSF034367 1 327 2.0E-199 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 AYJ52_10825 134d09ba0792c1cce44770adf4bd6a7c 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.2E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_10825 134d09ba0792c1cce44770adf4bd6a7c 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 5.9E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_10825 134d09ba0792c1cce44770adf4bd6a7c 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 5.9E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_10825 134d09ba0792c1cce44770adf4bd6a7c 184 Gene3D G3DSA:1.10.357.10 3 184 5.3E-22 T 11-10-2018 AYJ52_10825 134d09ba0792c1cce44770adf4bd6a7c 184 SUPERFAMILY SSF46689 9 69 4.16E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_03660 5a8b7ae369f092c835258f565d340719 486 Gene3D G3DSA:3.40.50.150 27 248 2.0E-34 T 11-10-2018 AYJ52_03660 5a8b7ae369f092c835258f565d340719 486 SUPERFAMILY SSF53335 10 242 1.27E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_03660 5a8b7ae369f092c835258f565d340719 486 Pfam PF07669 Eco57I restriction-modification methylase 128 222 1.2E-10 T 11-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 AYJ52_03660 5a8b7ae369f092c835258f565d340719 486 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 24 40 3.6E-13 T 11-10-2018 AYJ52_03660 5a8b7ae369f092c835258f565d340719 486 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 159 183 3.6E-13 T 11-10-2018 AYJ52_03660 5a8b7ae369f092c835258f565d340719 486 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 128 140 3.6E-13 T 11-10-2018 AYJ52_03660 5a8b7ae369f092c835258f565d340719 486 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 51 65 3.6E-13 T 11-10-2018 AYJ52_13715 0ccd34ba47eb4cff5ee301d6f1ee0548 128 SUPERFAMILY SSF82649 1 125 1.86E-48 T 11-10-2018 AYJ52_13715 0ccd34ba47eb4cff5ee301d6f1ee0548 128 Pfam PF01592 NifU-like N terminal domain 2 127 1.9E-56 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AYJ52_13715 0ccd34ba47eb4cff5ee301d6f1ee0548 128 Gene3D G3DSA:3.90.1010.10 1 128 1.4E-57 T 11-10-2018 AYJ52_13715 0ccd34ba47eb4cff5ee301d6f1ee0548 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.3E-68 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AYJ52_07955 9cf68a5b5afe3599739802f3fc1e517b 132 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 46 94 4.3E-12 T 11-10-2018 IPR027805 Transposase, Helix-turn-helix domain AYJ52_18260 9cf68a5b5afe3599739802f3fc1e517b 132 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 46 94 4.3E-12 T 11-10-2018 IPR027805 Transposase, Helix-turn-helix domain AYJ52_18265 be7d7c00815b4ec43f8bbf6aed749ac9 87 Pfam PF13359 DDE superfamily endonuclease 1 82 4.0E-9 T 11-10-2018 IPR027806 Harbinger transposase-derived nuclease domain AYJ52_07950 be7d7c00815b4ec43f8bbf6aed749ac9 87 Pfam PF13359 DDE superfamily endonuclease 1 82 4.0E-9 T 11-10-2018 IPR027806 Harbinger transposase-derived nuclease domain AYJ52_06230 d02443b7da8cfd0b84a4cbdd48252a88 393 Gene3D G3DSA:2.40.420.20 307 373 1.3E-96 T 11-10-2018 AYJ52_06230 d02443b7da8cfd0b84a4cbdd48252a88 393 Gene3D G3DSA:1.10.287.470 104 177 1.3E-96 T 11-10-2018 AYJ52_06230 d02443b7da8cfd0b84a4cbdd48252a88 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 375 1.3E-86 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AYJ52_06230 d02443b7da8cfd0b84a4cbdd48252a88 393 SUPERFAMILY SSF111369 58 303 1.57E-66 T 11-10-2018 AYJ52_06230 d02443b7da8cfd0b84a4cbdd48252a88 393 Gene3D G3DSA:2.40.50.100 69 216 1.3E-96 T 11-10-2018 AYJ52_06230 d02443b7da8cfd0b84a4cbdd48252a88 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 296 1.0E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ52_06230 d02443b7da8cfd0b84a4cbdd48252a88 393 Gene3D G3DSA:2.40.30.170 58 306 1.3E-96 T 11-10-2018 AYJ52_16105 840e1f966ce92001ff9a4bbc8375c2e2 179 Pfam PF05232 Chlorhexidine efflux transporter 40 99 2.2E-16 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter AYJ52_16105 840e1f966ce92001ff9a4bbc8375c2e2 179 Pfam PF05232 Chlorhexidine efflux transporter 105 166 4.4E-23 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter AYJ52_10075 7e33adae7ccc76bb87cc42281db8f3b8 540 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 19 508 6.7E-167 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AYJ52_10075 7e33adae7ccc76bb87cc42281db8f3b8 540 ProSitePatterns PS01303 BCCT family of transporters signature. 322 331 - T 11-10-2018 IPR018093 BCCT transporter, conserved site AYJ52_10075 7e33adae7ccc76bb87cc42281db8f3b8 540 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 57 508 6.1E-148 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AYJ52_01895 f1f1fd0cb16a5677d5a1f29dcad9c7a8 127 Gene3D G3DSA:3.10.450.160 59 126 2.4E-16 T 11-10-2018 AYJ52_01895 f1f1fd0cb16a5677d5a1f29dcad9c7a8 127 Pfam PF11776 Nickel/cobalt transporter regulator 76 120 8.4E-19 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AYJ52_01895 f1f1fd0cb16a5677d5a1f29dcad9c7a8 127 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 72 117 8.0E-12 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AYJ52_14450 32d768d4a9fa62e99fab96e9e822a862 112 Pfam PF10734 Protein of unknown function (DUF2523) 29 98 3.8E-5 T 11-10-2018 IPR019670 Protein of unkown function DUF2523 AYJ52_01545 9bc3c6bc6e0d315baa8665d4da9795b5 250 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 21 243 9.9E-129 T 11-10-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110 AYJ52_01545 9bc3c6bc6e0d315baa8665d4da9795b5 250 Gene3D G3DSA:3.40.50.850 11 249 5.0E-57 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_01545 9bc3c6bc6e0d315baa8665d4da9795b5 250 Pfam PF00857 Isochorismatase family 36 233 4.2E-41 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AYJ52_01545 9bc3c6bc6e0d315baa8665d4da9795b5 250 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 19 246 60.866 T 11-10-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110 AYJ52_01545 9bc3c6bc6e0d315baa8665d4da9795b5 250 SUPERFAMILY SSF52499 20 238 1.96E-55 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_05560 a4a71b369d7a3f27549350d461e1bf85 381 Pfam PF07786 Protein of unknown function (DUF1624) 9 221 2.0E-20 T 11-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 AYJ52_17030 dfc4cb3c7070d7fda458e6fa0ecbd9a1 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.5E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_17030 dfc4cb3c7070d7fda458e6fa0ecbd9a1 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 6.5E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_17030 dfc4cb3c7070d7fda458e6fa0ecbd9a1 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 57 1.7E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_17030 dfc4cb3c7070d7fda458e6fa0ecbd9a1 190 SUPERFAMILY SSF46689 6 74 1.69E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_17030 dfc4cb3c7070d7fda458e6fa0ecbd9a1 190 Gene3D G3DSA:1.10.357.10 5 180 2.7E-21 T 11-10-2018 AYJ52_08835 b392af06309d4a438a55f513a468d6da 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.2E-28 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AYJ52_08835 b392af06309d4a438a55f513a468d6da 106 Gene3D G3DSA:1.10.3730.20 1 106 7.7E-32 T 11-10-2018 AYJ52_08835 b392af06309d4a438a55f513a468d6da 106 SUPERFAMILY SSF103481 6 104 1.14E-20 T 11-10-2018 AYJ52_12685 dda50ccf7e38e1c1ebfedcb1a8cacf5c 395 Pfam PF07690 Major Facilitator Superfamily 217 392 5.1E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_12685 dda50ccf7e38e1c1ebfedcb1a8cacf5c 395 SUPERFAMILY SSF103473 7 392 4.97E-31 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_12685 dda50ccf7e38e1c1ebfedcb1a8cacf5c 395 Gene3D G3DSA:1.20.1250.20 2 387 1.1E-28 T 11-10-2018 AYJ52_06115 9a58c3f5965acfbf83e676c0c8085b47 270 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 2 270 2.2E-38 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AYJ52_06115 9a58c3f5965acfbf83e676c0c8085b47 270 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 31 270 3.4E-34 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AYJ52_16165 52f8aedb35422f01a805fcac29168899 120 SUPERFAMILY SSF101756 32 118 5.23E-24 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AYJ52_16165 52f8aedb35422f01a805fcac29168899 120 Gene3D G3DSA:2.40.50.200 11 120 3.4E-26 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AYJ52_16165 52f8aedb35422f01a805fcac29168899 120 Pfam PF04076 Bacterial OB fold (BOF) protein 30 117 4.0E-22 T 11-10-2018 IPR005220 Bacterial OB-fold AYJ52_14460 e64dc9a8ad3e4c1952baab45245d04a2 74 Gene3D G3DSA:3.30.160.60 46 74 1.9E-5 T 11-10-2018 AYJ52_09505 211b8bfa8618390aeff5d33e734e62c3 594 Pfam PF14351 Domain of unknown function (DUF4401) 286 582 2.8E-19 T 11-10-2018 IPR025513 Domain of unknown function DUF4401 AYJ52_09505 211b8bfa8618390aeff5d33e734e62c3 594 Pfam PF09925 Predicted membrane protein (DUF2157) 10 115 3.7E-15 T 11-10-2018 IPR018677 Domain of unknown function DUF2157 AYJ52_17915 1be7f4f383e3a2b81dd52bd590714174 207 Pfam PF13309 HTH domain 144 204 1.0E-17 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain AYJ52_17915 1be7f4f383e3a2b81dd52bd590714174 207 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 5 130 7.0E-67 T 11-10-2018 IPR013559 YheO-like AYJ52_17915 1be7f4f383e3a2b81dd52bd590714174 207 Pfam PF08348 YheO-like PAS domain 9 119 2.3E-34 T 11-10-2018 IPR013559 YheO-like AYJ52_05625 f0ed5a555a88aa84bd90ffeb7da1b048 341 Pfam PF16113 Enoyl-CoA hydratase/isomerase 16 329 6.8E-99 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AYJ52_05625 f0ed5a555a88aa84bd90ffeb7da1b048 341 Gene3D G3DSA:3.90.226.10 3 338 7.1E-99 T 11-10-2018 AYJ52_05625 f0ed5a555a88aa84bd90ffeb7da1b048 341 SUPERFAMILY SSF52096 3 329 3.27E-62 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_12760 6bb37e38eb5b5ecbf853eb3cce3dbd3c 481 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 439 8.7E-169 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AYJ52_12760 6bb37e38eb5b5ecbf853eb3cce3dbd3c 481 PIRSF PIRSF006446 3 464 4.5E-212 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AYJ52_06855 a57261adda80f94ba798889ad0372f56 286 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 128 2.6E-33 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal AYJ52_06855 a57261adda80f94ba798889ad0372f56 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 227 242 2.6E-25 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AYJ52_06855 a57261adda80f94ba798889ad0372f56 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 147 164 2.6E-25 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AYJ52_06855 a57261adda80f94ba798889ad0372f56 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 204 214 2.6E-25 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AYJ52_06855 a57261adda80f94ba798889ad0372f56 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 215 226 2.6E-25 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AYJ52_06855 a57261adda80f94ba798889ad0372f56 286 Pfam PF01478 Type IV leader peptidase family 138 247 2.3E-23 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AYJ52_04270 bda146694129d75b8cd9eb67137c116c 427 SUPERFAMILY SSF53474 155 372 3.64E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04270 bda146694129d75b8cd9eb67137c116c 427 Pfam PF07819 PGAP1-like protein 152 374 3.2E-32 T 11-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 AYJ52_04270 bda146694129d75b8cd9eb67137c116c 427 Gene3D G3DSA:3.40.50.1820 165 415 9.8E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_18975 ef2bfb6f79da53d1327b55f863596cbf 286 Pfam PF13614 AAA domain 11 194 2.3E-28 T 11-10-2018 IPR025669 AAA domain AYJ52_18975 ef2bfb6f79da53d1327b55f863596cbf 286 SUPERFAMILY SSF52540 11 278 8.63E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_18975 ef2bfb6f79da53d1327b55f863596cbf 286 Gene3D G3DSA:3.40.50.300 2 284 3.9E-42 T 11-10-2018 AYJ52_11720 21a0f5727e1fa23d253ba198230f5f71 223 Gene3D G3DSA:3.30.1380.10 78 214 1.1E-5 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AYJ52_11720 21a0f5727e1fa23d253ba198230f5f71 223 SUPERFAMILY SSF55166 86 215 1.02E-15 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AYJ52_11720 21a0f5727e1fa23d253ba198230f5f71 223 Pfam PF08291 Peptidase M15 123 160 1.0E-5 T 11-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 AYJ52_14410 1e3c9716d7414d7dbf05bfde3e7374df 177 Gene3D G3DSA:2.60.40.1090 21 177 6.8E-32 T 11-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 AYJ52_14410 1e3c9716d7414d7dbf05bfde3e7374df 177 Pfam PF16970 Type-1 fimbrial protein, A 50 177 5.2E-23 T 11-10-2018 IPR039458 Type-1 fimbrial protein, A AYJ52_14410 1e3c9716d7414d7dbf05bfde3e7374df 177 SUPERFAMILY SSF49401 24 177 2.78E-25 T 11-10-2018 IPR008966 Adhesion domain superfamily AYJ52_00320 9a1abcc082bcc0ab754bce6b1280202d 191 Pfam PF13430 Domain of unknown function (DUF4112) 19 118 1.3E-21 T 11-10-2018 IPR025187 Protein of unknown function DUF4112 AYJ52_12045 3fdf4503c7cc9cc7da49d06f673f612e 1273 Pfam PF14331 ImcF-related N-terminal domain 188 443 1.7E-77 T 11-10-2018 IPR025743 ImcF-related, N-terminal domain AYJ52_12045 3fdf4503c7cc9cc7da49d06f673f612e 1273 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 39 1201 1.3E-198 T 11-10-2018 IPR017731 Type VI secretion system, IcmF AYJ52_12045 3fdf4503c7cc9cc7da49d06f673f612e 1273 SUPERFAMILY SSF52540 118 323 1.24E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_12045 3fdf4503c7cc9cc7da49d06f673f612e 1273 Pfam PF06761 Intracellular multiplication and human macrophage-killing 496 837 1.8E-83 T 11-10-2018 IPR009612 ImcF-related AYJ52_12045 3fdf4503c7cc9cc7da49d06f673f612e 1273 Pfam PF06744 Type VI secretion protein IcmF C-terminal 972 1179 8.9E-46 T 11-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal AYJ52_10470 12551b657101e330d6f85d324349d0fe 156 Gene3D G3DSA:2.40.128.640 48 156 1.3E-40 T 11-10-2018 AYJ52_10470 12551b657101e330d6f85d324349d0fe 156 Pfam PF04170 NlpE N-terminal domain 61 146 2.1E-28 T 11-10-2018 IPR007298 Copper resistance lipoprotein NlpE AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 SUPERFAMILY SSF51735 3 247 6.81E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 3.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 3.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 Gene3D G3DSA:3.40.50.720 2 251 1.8E-68 T 11-10-2018 AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 247 3.2E-54 T 11-10-2018 AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.3E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.3E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_12355 157b31f3be9ec6b7bfda5bdd28f34c0c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.3E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ52_14055 95ac2d20c1b2d9ed0cf85e1090c9a029 263 Pfam PF01925 Sulfite exporter TauE/SafE 8 253 1.4E-39 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AYJ52_00370 2404bfaf8ea787adaba207cf24bbd50f 699 Gene3D G3DSA:3.40.50.300 199 435 1.4E-8 T 11-10-2018 AYJ52_00370 2404bfaf8ea787adaba207cf24bbd50f 699 Gene3D G3DSA:3.40.50.300 1 100 2.3E-9 T 11-10-2018 AYJ52_00370 2404bfaf8ea787adaba207cf24bbd50f 699 Pfam PF13175 AAA ATPase domain 1 400 3.7E-45 T 11-10-2018 AYJ52_00370 2404bfaf8ea787adaba207cf24bbd50f 699 SUPERFAMILY SSF52540 1 403 3.25E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_01620 1f2f5397dfb97e36438b57d3e3e8bdeb 393 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 29 388 2.0E-105 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AYJ52_01620 1f2f5397dfb97e36438b57d3e3e8bdeb 393 Gene3D G3DSA:2.40.170.10 22 393 9.9E-92 T 11-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 AYJ52_01620 1f2f5397dfb97e36438b57d3e3e8bdeb 393 SUPERFAMILY SSF56935 24 393 8.55E-93 T 11-10-2018 AYJ52_01620 1f2f5397dfb97e36438b57d3e3e8bdeb 393 Pfam PF02264 LamB porin 26 393 9.3E-97 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AYJ52_01110 e70d76f97202d8254e345f6c96b58acb 220 Pfam PF03374 Phage antirepressor protein KilAC domain 120 213 7.8E-13 T 11-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 AYJ52_08785 3f3f20d7b5551df6e519dd288e9422ad 263 Gene3D G3DSA:3.40.50.150 67 263 1.1E-60 T 11-10-2018 AYJ52_08785 3f3f20d7b5551df6e519dd288e9422ad 263 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 263 25.83 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AYJ52_08785 3f3f20d7b5551df6e519dd288e9422ad 263 SUPERFAMILY SSF53335 33 262 1.01E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_08785 3f3f20d7b5551df6e519dd288e9422ad 263 Pfam PF04445 Putative SAM-dependent methyltransferase 73 262 5.6E-49 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AYJ52_03205 a493bc685e5eee7f7486813d4b5ce30d 360 Gene3D G3DSA:3.10.310.50 89 229 9.4E-48 T 11-10-2018 AYJ52_03205 a493bc685e5eee7f7486813d4b5ce30d 360 Pfam PF04536 TPM domain 100 223 4.8E-39 T 11-10-2018 IPR007621 TPM domain AYJ52_14355 ba24a8d72a8f9ebbd1b34edfc597a96b 141 SUPERFAMILY SSF51316 1 131 2.41E-31 T 11-10-2018 IPR011057 Mss4-like superfamily AYJ52_14355 ba24a8d72a8f9ebbd1b34edfc597a96b 141 Gene3D G3DSA:2.170.150.70 4 119 3.3E-15 T 11-10-2018 AYJ52_14355 ba24a8d72a8f9ebbd1b34edfc597a96b 141 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 100 1.1E-17 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AYJ52_02195 776a57dd8d457bb5e835ed76db0becb0 269 SMART SM00563 83 194 3.1E-15 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AYJ52_02195 776a57dd8d457bb5e835ed76db0becb0 269 SUPERFAMILY SSF69593 29 266 2.62E-22 T 11-10-2018 AYJ52_02195 776a57dd8d457bb5e835ed76db0becb0 269 Pfam PF01553 Acyltransferase 72 186 1.9E-16 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AYJ52_08730 07062c64dafea5a8ef9a7f73eda53820 450 Gene3D G3DSA:3.60.120.10 9 447 1.3E-123 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AYJ52_08730 07062c64dafea5a8ef9a7f73eda53820 450 SUPERFAMILY SSF56322 37 445 4.97E-111 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AYJ52_08730 07062c64dafea5a8ef9a7f73eda53820 450 Pfam PF00425 chorismate binding enzyme 183 437 1.3E-90 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AYJ52_08730 07062c64dafea5a8ef9a7f73eda53820 450 PRINTS PR00095 Anthranilate synthase component I signature 285 298 2.7E-8 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AYJ52_08730 07062c64dafea5a8ef9a7f73eda53820 450 PRINTS PR00095 Anthranilate synthase component I signature 299 312 2.7E-8 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AYJ52_08730 07062c64dafea5a8ef9a7f73eda53820 450 PRINTS PR00095 Anthranilate synthase component I signature 379 393 2.7E-8 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AYJ52_15900 5addc01b0fc28e0b04f1477f40f2c21d 334 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AYJ52_15900 5addc01b0fc28e0b04f1477f40f2c21d 334 Gene3D G3DSA:3.40.50.1100 37 147 4.7E-98 T 11-10-2018 AYJ52_15900 5addc01b0fc28e0b04f1477f40f2c21d 334 Gene3D G3DSA:3.40.50.1100 7 302 4.7E-98 T 11-10-2018 AYJ52_15900 5addc01b0fc28e0b04f1477f40f2c21d 334 SUPERFAMILY SSF53686 2 312 2.62E-81 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ52_15900 5addc01b0fc28e0b04f1477f40f2c21d 334 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 6 309 7.8E-131 T 11-10-2018 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA AYJ52_15900 5addc01b0fc28e0b04f1477f40f2c21d 334 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 293 3.0E-55 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ52_06670 2bfd1cc3a40425e5708a59d247ba2870 161 Gene3D G3DSA:3.10.129.10 9 158 3.1E-30 T 11-10-2018 AYJ52_06670 2bfd1cc3a40425e5708a59d247ba2870 161 SUPERFAMILY SSF54637 11 158 1.71E-22 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_06670 2bfd1cc3a40425e5708a59d247ba2870 161 Pfam PF14539 Domain of unknown function (DUF4442) 13 151 5.9E-19 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AYJ52_03025 3727ec97ff136962f510991ee5067d36 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AYJ52_03025 3727ec97ff136962f510991ee5067d36 409 SUPERFAMILY SSF103473 8 389 3.01E-55 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_03025 3727ec97ff136962f510991ee5067d36 409 Pfam PF07690 Major Facilitator Superfamily 23 359 3.8E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_03025 3727ec97ff136962f510991ee5067d36 409 Gene3D G3DSA:1.20.1720.10 17 391 4.4E-64 T 11-10-2018 AYJ52_15895 9daa68b75dc9ecc81455ff4a54193b0a 340 Gene3D G3DSA:3.40.190.10 95 210 1.2E-77 T 11-10-2018 AYJ52_15895 9daa68b75dc9ecc81455ff4a54193b0a 340 Pfam PF13379 NMT1-like family 4 246 9.2E-54 T 11-10-2018 AYJ52_15895 9daa68b75dc9ecc81455ff4a54193b0a 340 SUPERFAMILY SSF53850 8 257 1.3E-16 T 11-10-2018 AYJ52_15895 9daa68b75dc9ecc81455ff4a54193b0a 340 Gene3D G3DSA:3.40.190.10 11 336 1.2E-77 T 11-10-2018 AYJ52_06300 191ec1890e8bbee1a5b1e5e74c1dc03b 238 Gene3D G3DSA:1.25.40.10 12 234 5.2E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_06300 191ec1890e8bbee1a5b1e5e74c1dc03b 238 SUPERFAMILY SSF48452 83 217 1.14E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_11750 f62f143b34be4c1cbf914a54172df42b 441 Gene3D G3DSA:1.20.1440.320 106 263 4.7E-135 T 11-10-2018 AYJ52_11750 f62f143b34be4c1cbf914a54172df42b 441 Gene3D G3DSA:3.40.50.1000 52 416 4.7E-135 T 11-10-2018 IPR023214 HAD superfamily AYJ52_11750 f62f143b34be4c1cbf914a54172df42b 441 SUPERFAMILY SSF56784 43 373 5.74E-29 T 11-10-2018 IPR036412 HAD-like superfamily AYJ52_04240 a0e196ad93edeecb95a3117091a173fb 241 Gene3D G3DSA:2.40.230.20 17 235 4.7E-24 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AYJ52_04240 a0e196ad93edeecb95a3117091a173fb 241 SUPERFAMILY SSF111364 25 241 2.48E-63 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AYJ52_04240 a0e196ad93edeecb95a3117091a173fb 241 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 46 192 7.1E-11 T 11-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AYJ52_03035 8ee853b53c1ac1abdccc8c2315ffba61 195 Gene3D G3DSA:3.40.50.360 1 193 1.1E-61 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_03035 8ee853b53c1ac1abdccc8c2315ffba61 195 Pfam PF02525 Flavodoxin-like fold 3 188 1.6E-34 T 11-10-2018 IPR003680 Flavodoxin-like fold AYJ52_03035 8ee853b53c1ac1abdccc8c2315ffba61 195 SUPERFAMILY SSF52218 1 193 4.59E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AYJ52_16775 a38d2769c83c4fc8f025ca2403d2b573 335 Pfam PF13280 WYL domain 158 329 1.8E-24 T 11-10-2018 IPR026881 WYL domain AYJ52_16775 a38d2769c83c4fc8f025ca2403d2b573 335 SUPERFAMILY SSF46785 14 56 6.35E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_01700 31e878864329e51b9d1598901cb1733d 417 Gene3D G3DSA:2.40.160.180 30 417 6.6E-125 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily AYJ52_01700 31e878864329e51b9d1598901cb1733d 417 Pfam PF04966 Carbohydrate-selective porin, OprB family 75 417 1.8E-86 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 AYJ52_12170 f58a9304ced3936f3f8336cc361e9b2d 96 PIRSF PIRSF030200 1 96 4.0E-42 T 11-10-2018 IPR009359 Phenylacetic acid degradation B AYJ52_12170 f58a9304ced3936f3f8336cc361e9b2d 96 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 7 96 1.9E-45 T 11-10-2018 IPR009359 Phenylacetic acid degradation B AYJ52_12170 f58a9304ced3936f3f8336cc361e9b2d 96 Pfam PF06243 Phenylacetic acid degradation B 6 92 1.3E-37 T 11-10-2018 IPR009359 Phenylacetic acid degradation B AYJ52_12170 f58a9304ced3936f3f8336cc361e9b2d 96 Gene3D G3DSA:3.10.20.520 2 66 1.8E-29 T 11-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B AYJ52_17925 b1906ef8349f34868dc5075d799540df 303 Gene3D G3DSA:3.40.50.720 122 287 2.1E-79 T 11-10-2018 AYJ52_17925 b1906ef8349f34868dc5075d799540df 303 Gene3D G3DSA:3.30.1780.10 5 301 2.1E-79 T 11-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AYJ52_17925 b1906ef8349f34868dc5075d799540df 303 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 11 300 2.3E-68 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AYJ52_17925 b1906ef8349f34868dc5075d799540df 303 SUPERFAMILY SSF51735 1 301 1.02E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_17925 b1906ef8349f34868dc5075d799540df 303 PIRSF PIRSF001439 1 302 1.2E-80 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AYJ52_00930 eac55556da3c49061cd746c5a43f5ae0 116 Gene3D G3DSA:3.30.110.70 2 109 3.7E-32 T 11-10-2018 AYJ52_00930 eac55556da3c49061cd746c5a43f5ae0 116 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 24.88 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AYJ52_00930 eac55556da3c49061cd746c5a43f5ae0 116 SUPERFAMILY SSF117782 1 105 1.83E-36 T 11-10-2018 IPR035439 UPF0145 domain superfamily AYJ52_00930 eac55556da3c49061cd746c5a43f5ae0 116 Pfam PF01906 Putative heavy-metal-binding 1 103 5.2E-38 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AYJ52_12690 60f5dfb4545b0091fff1488fceb7e95a 224 Pfam PF12973 ChrR Cupin-like domain 19 109 3.3E-34 T 11-10-2018 IPR025979 ChrR-like cupin domain AYJ52_12690 60f5dfb4545b0091fff1488fceb7e95a 224 Pfam PF12973 ChrR Cupin-like domain 146 213 3.7E-7 T 11-10-2018 IPR025979 ChrR-like cupin domain AYJ52_12690 60f5dfb4545b0091fff1488fceb7e95a 224 SUPERFAMILY SSF51182 3 126 5.4E-28 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_12690 60f5dfb4545b0091fff1488fceb7e95a 224 Gene3D G3DSA:2.60.120.10 2 222 2.0E-72 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_12690 60f5dfb4545b0091fff1488fceb7e95a 224 SUPERFAMILY SSF51182 128 217 1.87E-8 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_00820 68f63ed3dbdbbcdba041f6b6155ae288 177 SUPERFAMILY SSF55718 49 131 1.94E-5 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_00820 68f63ed3dbdbbcdba041f6b6155ae288 177 Gene3D G3DSA:3.30.1050.10 20 134 8.2E-6 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_00440 4fbd9c1100f5cfdf22d5e3531bdff516 98 SUPERFAMILY SSF53098 19 93 8.91E-18 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_00440 4fbd9c1100f5cfdf22d5e3531bdff516 98 Pfam PF13683 Integrase core domain 18 83 5.6E-16 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_13990 8f94ab49d9aadf1b70b15945d58be20a 250 Pfam PF14518 Iron-containing redox enzyme 55 233 1.6E-20 T 11-10-2018 AYJ52_13990 8f94ab49d9aadf1b70b15945d58be20a 250 Gene3D G3DSA:1.20.910.10 1 249 2.8E-79 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_13990 8f94ab49d9aadf1b70b15945d58be20a 250 SUPERFAMILY SSF48613 22 242 4.3E-47 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AYJ52_00020 a2554d9ea0fdb494ba0f62d76a16cf08 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 43 192 1.6E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AYJ52_00020 a2554d9ea0fdb494ba0f62d76a16cf08 204 Pfam PF04542 Sigma-70 region 2 45 95 1.2E-5 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AYJ52_00020 a2554d9ea0fdb494ba0f62d76a16cf08 204 Pfam PF08281 Sigma-70, region 4 136 185 5.0E-16 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AYJ52_00020 a2554d9ea0fdb494ba0f62d76a16cf08 204 Gene3D G3DSA:1.10.10.10 111 195 1.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_00020 a2554d9ea0fdb494ba0f62d76a16cf08 204 SUPERFAMILY SSF88946 42 97 4.32E-7 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AYJ52_00020 a2554d9ea0fdb494ba0f62d76a16cf08 204 SUPERFAMILY SSF88659 108 194 1.21E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ52_05990 c128d2da5e3d0ffb5bf33afae2b9f5dd 161 Pfam PF11158 Protein of unknown function (DUF2938) 11 157 5.8E-57 T 11-10-2018 IPR021329 Protein of unknown function DUF2938 AYJ52_18085 e2555e6892aa7ce369d1d2cad62621c2 134 Gene3D G3DSA:1.10.260.40 6 83 4.6E-6 T 11-10-2018 AYJ52_17000 246378f473a55d0712a5bbde84675037 235 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 44 213 1.9E-24 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AYJ52_17000 246378f473a55d0712a5bbde84675037 235 SUPERFAMILY SSF159594 40 221 1.49E-21 T 11-10-2018 AYJ52_05805 9324ec3a2c6c771aab2bc344f2fde6ce 262 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_05805 9324ec3a2c6c771aab2bc344f2fde6ce 262 SUPERFAMILY SSF52540 7 225 5.83E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_05805 9324ec3a2c6c771aab2bc344f2fde6ce 262 SMART SM00382 38 205 6.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_05805 9324ec3a2c6c771aab2bc344f2fde6ce 262 Pfam PF00005 ABC transporter 29 156 9.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_05805 9324ec3a2c6c771aab2bc344f2fde6ce 262 Gene3D G3DSA:3.40.50.300 7 243 1.7E-56 T 11-10-2018 AYJ52_05200 a2c5ed32d282171a964c8d6cc0b0a731 109 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 53 107 5.0E-12 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AYJ52_05200 a2c5ed32d282171a964c8d6cc0b0a731 109 Pfam PF11776 Nickel/cobalt transporter regulator 56 106 1.7E-14 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AYJ52_05200 a2c5ed32d282171a964c8d6cc0b0a731 109 Gene3D G3DSA:3.10.450.160 30 109 2.7E-14 T 11-10-2018 AYJ52_02180 966bd25c1011fdfbc20abd96105cc034 336 Gene3D G3DSA:3.60.21.10 114 313 7.5E-21 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AYJ52_02180 966bd25c1011fdfbc20abd96105cc034 336 SUPERFAMILY SSF56300 116 335 6.08E-31 T 11-10-2018 AYJ52_02180 966bd25c1011fdfbc20abd96105cc034 336 Pfam PF00149 Calcineurin-like phosphoesterase 116 306 5.4E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AYJ52_04675 b98f4f6ea18cff492008e003fb0540d8 120 SUPERFAMILY SSF54197 3 116 1.25E-26 T 11-10-2018 IPR036265 HIT-like superfamily AYJ52_04675 b98f4f6ea18cff492008e003fb0540d8 120 Gene3D G3DSA:3.30.428.10 1 119 4.6E-25 T 11-10-2018 IPR036265 HIT-like superfamily AYJ52_04675 b98f4f6ea18cff492008e003fb0540d8 120 Pfam PF01230 HIT domain 16 105 3.2E-12 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AYJ52_04105 678ddf948f11104c5066f672e2bcaffc 230 Gene3D G3DSA:2.70.70.10 72 229 2.9E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif AYJ52_04105 678ddf948f11104c5066f672e2bcaffc 230 SUPERFAMILY SSF51261 79 226 7.85E-54 T 11-10-2018 IPR011055 Duplicated hybrid motif AYJ52_04105 678ddf948f11104c5066f672e2bcaffc 230 Pfam PF01551 Peptidase family M23 128 222 8.8E-32 T 11-10-2018 IPR016047 Peptidase M23 AYJ52_09465 98ba8649ef93f2dd0e970e36fffcaf69 61 SUPERFAMILY SSF57829 2 54 1.22E-17 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AYJ52_09465 98ba8649ef93f2dd0e970e36fffcaf69 61 Pfam PF01783 Ribosomal L32p protein family 2 55 2.7E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_09465 98ba8649ef93f2dd0e970e36fffcaf69 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.561 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_09465 98ba8649ef93f2dd0e970e36fffcaf69 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 53 5.0E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AYJ52_10685 99e4d704d4915a26e336976ef81e603e 547 SUPERFAMILY SSF47226 424 532 2.83E-5 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AYJ52_09785 5ebd7e9e12c2fe91ac479147e031d4f9 308 SMART SM00563 94 236 4.0E-9 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AYJ52_09785 5ebd7e9e12c2fe91ac479147e031d4f9 308 SUPERFAMILY SSF69593 88 296 1.05E-27 T 11-10-2018 AYJ52_09785 5ebd7e9e12c2fe91ac479147e031d4f9 308 Pfam PF01553 Acyltransferase 90 235 4.3E-10 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AYJ52_07030 034dcf05021f782072880c84ad71bd6b 403 SUPERFAMILY SSF143865 28 291 1.83E-18 T 11-10-2018 AYJ52_07030 034dcf05021f782072880c84ad71bd6b 403 SUPERFAMILY SSF144083 293 355 6.93E-20 T 11-10-2018 AYJ52_07030 034dcf05021f782072880c84ad71bd6b 403 Gene3D G3DSA:1.20.58.340 301 357 2.4E-20 T 11-10-2018 AYJ52_07030 034dcf05021f782072880c84ad71bd6b 403 Pfam PF01544 CorA-like Mg2+ transporter protein 47 354 6.2E-45 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AYJ52_07030 034dcf05021f782072880c84ad71bd6b 403 Gene3D G3DSA:1.20.58.340 163 299 3.0E-7 T 11-10-2018 AYJ52_14485 d067f4b869fd163f99706f5f9799da98 211 SMART SM00479 5 173 6.9E-43 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_14485 d067f4b869fd163f99706f5f9799da98 211 Gene3D G3DSA:3.30.420.10 2 172 1.5E-48 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AYJ52_14485 d067f4b869fd163f99706f5f9799da98 211 Pfam PF00929 Exonuclease 7 164 5.5E-33 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ52_14485 d067f4b869fd163f99706f5f9799da98 211 SUPERFAMILY SSF53098 5 195 1.04E-50 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_14485 d067f4b869fd163f99706f5f9799da98 211 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 175 1.9E-24 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AYJ52_02515 36e745ff086cf840f3377e950a5507e4 69 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 48 1.6E-17 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AYJ52_02515 36e745ff086cf840f3377e950a5507e4 69 Pfam PF09526 Probable metal-binding protein (DUF2387) 1 46 2.0E-18 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AYJ52_08040 6de06a7b3f844d0088b98a5f321aa100 314 Pfam PF11726 Inovirus Gp2 130 304 7.8E-20 T 11-10-2018 AYJ52_17630 3766f4e57a24bf3665408c165180429f 178 Pfam PF03412 Peptidase C39 family 13 67 8.0E-8 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AYJ52_17630 3766f4e57a24bf3665408c165180429f 178 Gene3D G3DSA:3.90.70.10 12 176 2.2E-7 T 11-10-2018 AYJ52_17415 4cda211e17f23117bca0eab134cea844 423 Pfam PF13194 Domain of unknown function (DUF4010) 186 393 5.0E-28 T 11-10-2018 IPR025105 Domain of unknown function DUF4010 AYJ52_17415 4cda211e17f23117bca0eab134cea844 423 Pfam PF02308 MgtC family 22 136 1.9E-15 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AYJ52_08075 273d0ed27f22493c96921efdcdd2cbcb 347 Pfam PF06067 Domain of unknown function (DUF932) 77 327 6.7E-78 T 11-10-2018 IPR026325 Protein of unknown function DUF932 AYJ52_08075 273d0ed27f22493c96921efdcdd2cbcb 347 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 343 2.2E-117 T 11-10-2018 IPR017686 Phage/plasmid-like protein AYJ52_01065 9a56a7c322f0932d206693c0b595e091 395 Gene3D G3DSA:3.10.310.10 181 374 1.2E-151 T 11-10-2018 AYJ52_01065 9a56a7c322f0932d206693c0b595e091 395 SUPERFAMILY SSF54506 189 393 1.33E-78 T 11-10-2018 AYJ52_01065 9a56a7c322f0932d206693c0b595e091 395 Pfam PF04303 PrpF protein 6 391 2.8E-176 T 11-10-2018 IPR007400 PrpF protein AYJ52_01065 9a56a7c322f0932d206693c0b595e091 395 Gene3D G3DSA:3.10.310.10 11 388 1.2E-151 T 11-10-2018 AYJ52_01065 9a56a7c322f0932d206693c0b595e091 395 SUPERFAMILY SSF54506 3 182 1.18E-71 T 11-10-2018 AYJ52_01065 9a56a7c322f0932d206693c0b595e091 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 395 1.0E-232 T 11-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 AYJ52_10440 59a2593e096b46ef9f0b2e5c370e8e7d 182 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 6 174 1.0E-52 T 11-10-2018 IPR018715 Protein of unknown function DUF2239 AYJ52_16990 f0a7da85ee91da9fb5101b83545cb5db 162 Pfam PF03928 Haem-degrading 31 157 5.8E-27 T 11-10-2018 IPR005624 Haem-degrading AYJ52_16990 f0a7da85ee91da9fb5101b83545cb5db 162 SUPERFAMILY SSF143744 26 159 1.14E-32 T 11-10-2018 IPR038084 GlcG-like domain superfamily AYJ52_16990 f0a7da85ee91da9fb5101b83545cb5db 162 Gene3D G3DSA:3.30.450.150 18 160 1.2E-34 T 11-10-2018 IPR038084 GlcG-like domain superfamily AYJ52_01180 82f06d5731ce3e4e766d60a173ba3b39 366 SMART SM00382 114 246 6.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_01180 82f06d5731ce3e4e766d60a173ba3b39 366 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 118 243 2.4E-28 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AYJ52_01180 82f06d5731ce3e4e766d60a173ba3b39 366 Gene3D G3DSA:1.10.10.60 320 358 6.7E-6 T 11-10-2018 AYJ52_01180 82f06d5731ce3e4e766d60a173ba3b39 366 Gene3D G3DSA:3.40.50.300 69 264 7.3E-40 T 11-10-2018 AYJ52_01180 82f06d5731ce3e4e766d60a173ba3b39 366 SUPERFAMILY SSF52540 90 296 1.08E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_17440 c829bb160a8fbfa1e55fa5b3a8fc5752 456 Pfam PF01136 Peptidase family U32 75 340 2.3E-95 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AYJ52_17440 c829bb160a8fbfa1e55fa5b3a8fc5752 456 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AYJ52_17440 c829bb160a8fbfa1e55fa5b3a8fc5752 456 Gene3D G3DSA:2.40.30.10 354 438 1.9E-9 T 11-10-2018 AYJ52_17440 c829bb160a8fbfa1e55fa5b3a8fc5752 456 Pfam PF16325 Peptidase family U32 C-terminal domain 358 437 1.8E-19 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal AYJ52_04170 189a133d573f11ead5df372f656c3681 216 Gene3D G3DSA:3.40.50.2020 6 216 1.3E-76 T 11-10-2018 AYJ52_04170 189a133d573f11ead5df372f656c3681 216 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 191 5.4E-58 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_04170 189a133d573f11ead5df372f656c3681 216 SUPERFAMILY SSF53271 10 199 2.88E-49 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AYJ52_04170 189a133d573f11ead5df372f656c3681 216 Pfam PF00156 Phosphoribosyl transferase domain 47 163 1.3E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AYJ52_04170 189a133d573f11ead5df372f656c3681 216 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 216 33.319 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AYJ52_16885 69c35f4515105198b7cfb0832cb3bea6 336 Pfam PF03601 Conserved hypothetical protein 698 18 316 1.3E-71 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AYJ52_01675 70d210798fd852443ce683734de79310 147 Gene3D G3DSA:3.10.180.10 1 147 9.4E-44 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_01675 70d210798fd852443ce683734de79310 147 SUPERFAMILY SSF54593 1 143 6.42E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ52_01675 70d210798fd852443ce683734de79310 147 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 141 4.0E-7 T 11-10-2018 IPR028973 PhnB-like AYJ52_14590 9772bb3d8103c80aa4a5f2fc1a597513 269 Pfam PF01925 Sulfite exporter TauE/SafE 5 263 3.6E-36 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AYJ52_15645 eb4a60bd8adc284c80bbac053c487d10 291 Pfam PF16331 TolA binding protein trimerisation 50 103 1.4E-10 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AYJ52_15645 eb4a60bd8adc284c80bbac053c487d10 291 Pfam PF13174 Tetratricopeptide repeat 178 206 0.023 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AYJ52_15645 eb4a60bd8adc284c80bbac053c487d10 291 Gene3D G3DSA:1.25.40.10 172 290 1.0E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_15645 eb4a60bd8adc284c80bbac053c487d10 291 SUPERFAMILY SSF48452 173 286 1.19E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_16620 2fc07b6cc9fcfb9f5b429b6739fe6c6e 279 SUPERFAMILY SSF161098 77 261 5.49E-29 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_16620 2fc07b6cc9fcfb9f5b429b6739fe6c6e 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 269 1.1E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_16620 2fc07b6cc9fcfb9f5b429b6739fe6c6e 279 Gene3D G3DSA:1.10.3720.10 70 270 3.6E-23 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_11300 6152f8f692e69f57937cc8e3c0308b1f 195 SUPERFAMILY SSF53335 16 194 1.72E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_11300 6152f8f692e69f57937cc8e3c0308b1f 195 Gene3D G3DSA:3.40.50.150 3 195 1.7E-47 T 11-10-2018 AYJ52_11300 6152f8f692e69f57937cc8e3c0308b1f 195 Pfam PF01596 O-methyltransferase 23 161 3.4E-22 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 AYJ52_15205 4328ba754f0b1bae7fc59329b3815547 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 205 219 2.8E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15205 4328ba754f0b1bae7fc59329b3815547 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.8E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15205 4328ba754f0b1bae7fc59329b3815547 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 2.8E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15205 4328ba754f0b1bae7fc59329b3815547 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 2.8E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15205 4328ba754f0b1bae7fc59329b3815547 261 Gene3D G3DSA:3.40.50.1820 3 260 1.2E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15205 4328ba754f0b1bae7fc59329b3815547 261 SUPERFAMILY SSF53474 9 259 2.75E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15205 4328ba754f0b1bae7fc59329b3815547 261 Pfam PF00561 alpha/beta hydrolase fold 24 246 1.8E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15205 4328ba754f0b1bae7fc59329b3815547 261 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 18 259 1.4E-83 T 11-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 AYJ52_16280 4f05e0699f16037b8b0c2cbfaa4ae6b3 183 Gene3D G3DSA:1.10.357.10 6 180 3.0E-18 T 11-10-2018 AYJ52_16280 4f05e0699f16037b8b0c2cbfaa4ae6b3 183 SUPERFAMILY SSF46689 7 76 6.16E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_16280 4f05e0699f16037b8b0c2cbfaa4ae6b3 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 1.6E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_16280 4f05e0699f16037b8b0c2cbfaa4ae6b3 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_16280 4f05e0699f16037b8b0c2cbfaa4ae6b3 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AYJ52_08790 5c7611602200af49cbf823a4325ff97e 483 Pfam PF01650 Peptidase C13 family 233 440 4.6E-42 T 11-10-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 AYJ52_08790 5c7611602200af49cbf823a4325ff97e 483 SUPERFAMILY SSF52129 286 422 1.53E-7 T 11-10-2018 IPR029030 Caspase-like domain superfamily AYJ52_08790 5c7611602200af49cbf823a4325ff97e 483 Gene3D G3DSA:3.40.50.1460 292 473 4.8E-10 T 11-10-2018 AYJ52_10085 f2242b681e713d3ae174f77729b4cccf 204 Pfam PF01914 MarC family integral membrane protein 5 200 4.4E-19 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AYJ52_03440 245523b6b6dcff4377e81dc6bb62a81f 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 7 141 6.1E-14 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AYJ52_03440 245523b6b6dcff4377e81dc6bb62a81f 141 PIRSF PIRSF004638 2 141 1.4E-19 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AYJ52_10645 05472f4400d5b830b5d7c40522a5a641 200 Pfam PF01810 LysE type translocator 17 199 7.4E-37 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_09080 510801bd7ecbcf16dcf5c7bd90005113 315 SUPERFAMILY SSF53474 129 291 2.48E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_09080 510801bd7ecbcf16dcf5c7bd90005113 315 Gene3D G3DSA:3.40.50.1820 136 298 9.5E-9 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_04030 20f9cdc0d37c538a24f2a8f5e7460c75 430 Gene3D G3DSA:3.40.50.11720 32 213 5.2E-42 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AYJ52_04030 20f9cdc0d37c538a24f2a8f5e7460c75 430 Gene3D G3DSA:3.40.50.2000 219 410 3.6E-64 T 11-10-2018 AYJ52_04030 20f9cdc0d37c538a24f2a8f5e7460c75 430 SUPERFAMILY SSF53756 177 411 2.12E-12 T 11-10-2018 AYJ52_04030 20f9cdc0d37c538a24f2a8f5e7460c75 430 Pfam PF00534 Glycosyl transferases group 1 296 406 2.4E-6 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AYJ52_04030 20f9cdc0d37c538a24f2a8f5e7460c75 430 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 37 215 3.8E-55 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AYJ52_18335 b8e5f078c55281e485c931103f83c01c 234 Gene3D G3DSA:1.10.1200.10 166 234 1.3E-9 T 11-10-2018 IPR036736 ACP-like superfamily AYJ52_16085 8a782ad34a6fae075373ffda9e7c0427 419 Gene3D G3DSA:3.40.710.30 14 407 3.4E-100 T 11-10-2018 AYJ52_16085 8a782ad34a6fae075373ffda9e7c0427 419 Pfam PF00144 Beta-lactamase 35 385 5.1E-55 T 11-10-2018 IPR001466 Beta-lactamase-related AYJ52_16085 8a782ad34a6fae075373ffda9e7c0427 419 SUPERFAMILY SSF56601 35 389 2.21E-69 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AYJ52_01085 94035697147a4e857beeaa1934b91af3 84 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 79 2.2E-36 T 11-10-2018 IPR019882 Conserved hypothetical protein CHP03643 AYJ52_01085 94035697147a4e857beeaa1934b91af3 84 Pfam PF10985 Protein of unknown function (DUF2805) 10 80 6.5E-36 T 11-10-2018 IPR019882 Conserved hypothetical protein CHP03643 AYJ52_12800 53d18e4a4b7360979ce3f8901398cfe1 264 Pfam PF00005 ABC transporter 21 161 3.5E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AYJ52_12800 53d18e4a4b7360979ce3f8901398cfe1 264 SUPERFAMILY SSF52540 4 220 1.04E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_12800 53d18e4a4b7360979ce3f8901398cfe1 264 Gene3D G3DSA:3.40.50.300 2 259 1.8E-61 T 11-10-2018 AYJ52_12800 53d18e4a4b7360979ce3f8901398cfe1 264 SMART SM00382 30 229 6.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AYJ52_12800 53d18e4a4b7360979ce3f8901398cfe1 264 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AYJ52_00015 a8b7666be3620635882d71ac7089b875 258 Gene3D G3DSA:3.40.1280.10 113 258 4.5E-44 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ52_00015 a8b7666be3620635882d71ac7089b875 258 Gene3D G3DSA:3.30.1330.30 5 105 7.2E-9 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AYJ52_00015 a8b7666be3620635882d71ac7089b875 258 SUPERFAMILY SSF55315 5 105 1.65E-14 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AYJ52_00015 a8b7666be3620635882d71ac7089b875 258 Pfam PF00588 SpoU rRNA Methylase family 117 250 1.1E-29 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AYJ52_00015 a8b7666be3620635882d71ac7089b875 258 SUPERFAMILY SSF75217 115 258 1.31E-35 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AYJ52_03065 f22215c3fd8acdf14ab97656c9aec7a5 287 Pfam PF00892 EamA-like transporter family 147 278 2.1E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_03065 f22215c3fd8acdf14ab97656c9aec7a5 287 Pfam PF00892 EamA-like transporter family 7 132 2.2E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_03065 f22215c3fd8acdf14ab97656c9aec7a5 287 SUPERFAMILY SSF103481 186 283 2.22E-12 T 11-10-2018 AYJ52_12725 560393ffb279828dbb7225ab28b2a6c6 200 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 7 198 1.6E-47 T 11-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AYJ52_12725 560393ffb279828dbb7225ab28b2a6c6 200 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 7 197 1.3E-46 T 11-10-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AYJ52_06535 abf96f8718d216dc373748f94146944e 255 Gene3D G3DSA:3.40.50.10090 32 166 2.7E-41 T 11-10-2018 AYJ52_06535 abf96f8718d216dc373748f94146944e 255 Gene3D G3DSA:3.40.50.10090 4 226 2.7E-41 T 11-10-2018 AYJ52_06535 abf96f8718d216dc373748f94146944e 255 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 225 2.0E-30 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_06535 abf96f8718d216dc373748f94146944e 255 SUPERFAMILY SSF69618 5 249 1.7E-41 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AYJ52_07495 7a7dd46fa87a67841b4c201b10778245 206 Pfam PF01618 MotA/TolQ/ExbB proton channel family 57 172 1.4E-32 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AYJ52_04815 e31d11154502e33f9a4fa7fdf2105cf7 230 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 7 230 9.3E-67 T 11-10-2018 IPR026387 Outer membrane protein AYJ52_04815 e31d11154502e33f9a4fa7fdf2105cf7 230 SUPERFAMILY SSF103515 13 186 1.57E-5 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily AYJ52_01515 071cccfc63678b8e2abab0c5dabd03da 113 SUPERFAMILY SSF160113 61 109 6.67E-17 T 11-10-2018 IPR036913 YegP-like superfamily AYJ52_01515 071cccfc63678b8e2abab0c5dabd03da 113 SUPERFAMILY SSF160113 1 57 7.06E-18 T 11-10-2018 IPR036913 YegP-like superfamily AYJ52_01515 071cccfc63678b8e2abab0c5dabd03da 113 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 1.6E-21 T 11-10-2018 IPR010879 Domain of unknown function DUF1508 AYJ52_01515 071cccfc63678b8e2abab0c5dabd03da 113 Pfam PF07411 Domain of unknown function (DUF1508) 10 57 4.8E-19 T 11-10-2018 IPR010879 Domain of unknown function DUF1508 AYJ52_01515 071cccfc63678b8e2abab0c5dabd03da 113 Gene3D G3DSA:2.30.29.80 1 113 2.0E-47 T 11-10-2018 AYJ52_17820 9779591115b372f7b8e272be32e6e39d 251 SUPERFAMILY SSF56214 137 250 2.27E-13 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_17820 9779591115b372f7b8e272be32e6e39d 251 PRINTS PR01399 Enterobactin synthetase component D signature 96 114 2.5E-8 T 11-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AYJ52_17820 9779591115b372f7b8e272be32e6e39d 251 PRINTS PR01399 Enterobactin synthetase component D signature 66 86 2.5E-8 T 11-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AYJ52_17820 9779591115b372f7b8e272be32e6e39d 251 Gene3D G3DSA:3.90.470.20 135 247 1.3E-8 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_17820 9779591115b372f7b8e272be32e6e39d 251 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 136 231 3.5E-13 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AYJ52_00230 5384d67132b7421889d6f1aaa75a2b2c 130 Pfam PF06803 Protein of unknown function (DUF1232) 35 69 5.7E-13 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 AYJ52_09600 6683dc9921f6960352851a9b6cec622f 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 2.0E-55 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AYJ52_09600 6683dc9921f6960352851a9b6cec622f 158 Gene3D G3DSA:2.40.280.10 7 136 4.9E-46 T 11-10-2018 IPR023620 Small protein B AYJ52_09600 6683dc9921f6960352851a9b6cec622f 158 SUPERFAMILY SSF74982 9 139 2.22E-49 T 11-10-2018 IPR023620 Small protein B AYJ52_09600 6683dc9921f6960352851a9b6cec622f 158 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site AYJ52_09600 6683dc9921f6960352851a9b6cec622f 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 156 1.2E-51 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AYJ52_09600 6683dc9921f6960352851a9b6cec622f 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 68.887 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AYJ52_09600 6683dc9921f6960352851a9b6cec622f 158 Pfam PF01668 SmpB protein 15 157 2.6E-56 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AYJ52_09845 4ba38f1ea812eb7a590cb3b430d2ff0d 145 SUPERFAMILY SSF46785 6 134 1.85E-44 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_09845 4ba38f1ea812eb7a590cb3b430d2ff0d 145 Gene3D G3DSA:3.30.1490.190 85 141 4.9E-23 T 11-10-2018 AYJ52_09845 4ba38f1ea812eb7a590cb3b430d2ff0d 145 Gene3D G3DSA:1.10.10.10 2 84 1.1E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_09845 4ba38f1ea812eb7a590cb3b430d2ff0d 145 Pfam PF01475 Ferric uptake regulator family 10 130 4.0E-45 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AYJ52_05160 18ce0df78f6399d10ec24cb0772dba6a 188 Gene3D G3DSA:3.40.50.1580 1 187 4.1E-39 T 11-10-2018 AYJ52_05160 18ce0df78f6399d10ec24cb0772dba6a 188 SUPERFAMILY SSF53167 4 183 4.71E-35 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AYJ52_05160 18ce0df78f6399d10ec24cb0772dba6a 188 Pfam PF01048 Phosphorylase superfamily 28 173 3.3E-16 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AYJ52_00790 be5b262fad4b590a18d6a4db144a1853 174 Pfam PF03695 Uncharacterised protein family (UPF0149) 7 170 2.5E-21 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AYJ52_00790 be5b262fad4b590a18d6a4db144a1853 174 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 169 1.1E-21 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AYJ52_00790 be5b262fad4b590a18d6a4db144a1853 174 Gene3D G3DSA:1.20.120.740 3 157 7.5E-7 T 11-10-2018 AYJ52_00790 be5b262fad4b590a18d6a4db144a1853 174 SUPERFAMILY SSF101327 4 172 1.7E-25 T 11-10-2018 IPR036255 YgfB-like superfamily AYJ52_07045 37344c9cc0145c6a4b2f1790201ee82f 203 Pfam PF01810 LysE type translocator 15 200 8.8E-25 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_04495 bb2f8b17f57be75a8147688bb96828e9 183 SUPERFAMILY SSF46785 117 179 6.19E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_04495 bb2f8b17f57be75a8147688bb96828e9 183 Gene3D G3DSA:1.10.10.10 117 182 1.3E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_10885 21322c67608523b0895e6e5db5ecf496 487 Gene3D G3DSA:1.20.1740.10 26 485 4.6E-64 T 11-10-2018 AYJ52_10885 21322c67608523b0895e6e5db5ecf496 487 Pfam PF00324 Amino acid permease 36 473 3.1E-104 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_10885 21322c67608523b0895e6e5db5ecf496 487 PIRSF PIRSF006060 16 485 9.3E-69 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_10370 73277621a3cf08d50896be07f7f44d0f 269 SUPERFAMILY SSF144091 16 219 4.97E-39 T 11-10-2018 AYJ52_10370 73277621a3cf08d50896be07f7f44d0f 269 Gene3D G3DSA:1.20.1540.10 11 228 1.2E-35 T 11-10-2018 IPR035952 Rhomboid-like superfamily AYJ52_10370 73277621a3cf08d50896be07f7f44d0f 269 Pfam PF01694 Rhomboid family 63 216 3.3E-35 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AYJ52_16160 d193861866a92159e0401943b854071a 168 SUPERFAMILY SSF55729 3 146 8.33E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_16160 d193861866a92159e0401943b854071a 168 Pfam PF13527 Acetyltransferase (GNAT) domain 5 129 9.4E-12 T 11-10-2018 AYJ52_16160 d193861866a92159e0401943b854071a 168 Gene3D G3DSA:3.40.630.30 1 166 9.1E-47 T 11-10-2018 AYJ52_13615 dfd9fc5e553deeb5d126425a56d6702b 312 Gene3D G3DSA:1.10.3720.10 84 306 5.9E-20 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_13615 dfd9fc5e553deeb5d126425a56d6702b 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 309 1.3E-35 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AYJ52_13615 dfd9fc5e553deeb5d126425a56d6702b 312 SUPERFAMILY SSF161098 90 296 3.14E-14 T 11-10-2018 IPR035906 MetI-like superfamily AYJ52_02470 51dc03abfdd912e18fbd7b04176f99fe 230 SUPERFAMILY SSF55469 35 230 1.44E-70 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_02470 51dc03abfdd912e18fbd7b04176f99fe 230 Gene3D G3DSA:3.40.109.10 34 230 3.5E-85 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_02470 51dc03abfdd912e18fbd7b04176f99fe 230 Pfam PF00881 Nitroreductase family 40 208 5.3E-14 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AYJ52_09285 77a6c58a8afd518cbbb60f33a5e829ee 396 Gene3D G3DSA:3.40.50.300 133 377 5.5E-80 T 11-10-2018 AYJ52_09285 77a6c58a8afd518cbbb60f33a5e829ee 396 SUPERFAMILY SSF52540 130 361 1.92E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09285 77a6c58a8afd518cbbb60f33a5e829ee 396 Hamap MF_02040 Iron-sulfur cluster carrier protein. 131 379 36.194 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AYJ52_09285 77a6c58a8afd518cbbb60f33a5e829ee 396 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 137 378 1.4E-96 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AYJ52_09285 77a6c58a8afd518cbbb60f33a5e829ee 396 ProSitePatterns PS01215 Mrp family signature. 244 260 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 AYJ52_06095 11bc7ac11af9e110a5dc706e632f67bb 132 Pfam PF01124 MAPEG family 8 129 4.8E-23 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AYJ52_06095 11bc7ac11af9e110a5dc706e632f67bb 132 Gene3D G3DSA:1.20.120.550 4 131 3.0E-17 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AYJ52_06095 11bc7ac11af9e110a5dc706e632f67bb 132 SUPERFAMILY SSF161084 7 129 6.8E-27 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AYJ52_04800 81aba1dd384c014f0473766d06191c76 320 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 313 1.9E-92 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AYJ52_04800 81aba1dd384c014f0473766d06191c76 320 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 314 34.596 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AYJ52_04800 81aba1dd384c014f0473766d06191c76 320 Gene3D G3DSA:3.10.25.10 214 318 7.2E-26 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AYJ52_04800 81aba1dd384c014f0473766d06191c76 320 Gene3D G3DSA:3.40.50.170 1 213 9.6E-77 T 11-10-2018 AYJ52_04800 81aba1dd384c014f0473766d06191c76 320 SUPERFAMILY SSF50486 214 319 2.98E-25 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AYJ52_04800 81aba1dd384c014f0473766d06191c76 320 SUPERFAMILY SSF53328 1 188 1.7E-60 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AYJ52_04800 81aba1dd384c014f0473766d06191c76 320 Pfam PF02911 Formyl transferase, C-terminal domain 211 310 6.2E-22 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AYJ52_04800 81aba1dd384c014f0473766d06191c76 320 Pfam PF00551 Formyl transferase 2 184 7.3E-47 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AYJ52_01525 2aeaf68269b1efc1a0241dbb39200adf 118 Pfam PF04343 Protein of unknown function, DUF488 5 112 6.6E-34 T 11-10-2018 IPR007438 Protein of unknown function DUF488 AYJ52_07535 7751c5669b7f949421600c75f8071039 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 137 149 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AYJ52_07535 7751c5669b7f949421600c75f8071039 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 257 1.8E-74 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AYJ52_07535 7751c5669b7f949421600c75f8071039 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 262 19.475 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AYJ52_07535 7751c5669b7f949421600c75f8071039 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 262 1.2E-77 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AYJ52_01930 099a166ee74c5399c5022f8b92b51e8f 349 Pfam PF13524 Glycosyl transferases group 1 231 324 1.4E-12 T 11-10-2018 AYJ52_01930 099a166ee74c5399c5022f8b92b51e8f 349 SUPERFAMILY SSF53756 255 329 1.26E-5 T 11-10-2018 AYJ52_19445 3f523dff30e9ed53e28f664f8da647a1 702 Gene3D G3DSA:3.30.565.10 19 178 4.4E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_19445 3f523dff30e9ed53e28f664f8da647a1 702 SUPERFAMILY SSF55874 15 105 4.45E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_19445 3f523dff30e9ed53e28f664f8da647a1 702 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 97 1.8E-13 T 11-10-2018 AYJ52_15980 40c60f5268bac20bdda311d4a18d74a6 176 Pfam PF05229 Spore Coat Protein U domain 27 173 1.7E-29 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_15980 40c60f5268bac20bdda311d4a18d74a6 176 SMART SM00972 116 173 1.3E-19 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_04610 760041e8f37d34ab663d479d804c1ec8 156 Pfam PF04463 Protein of unknown function (DUF523) 3 146 1.1E-40 T 11-10-2018 IPR007553 Domain of unknown function DUF523 AYJ52_09685 3939a151adc23939eba61ccd4c2e1b00 150 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 7 148 1.1E-41 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AYJ52_09685 3939a151adc23939eba61ccd4c2e1b00 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 148 1.5E-49 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AYJ52_09685 3939a151adc23939eba61ccd4c2e1b00 150 PIRSF PIRSF004638 1 150 5.8E-50 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AYJ52_11445 17587649d4b11ea2a5a15bd4ea48a560 64 Pfam PF02609 Exonuclease VII small subunit 15 59 2.7E-5 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AYJ52_07445 d8638ef841c7b03a91e1c5f29ba3f966 120 Pfam PF04266 ASCH domain 8 83 7.5E-7 T 11-10-2018 IPR007374 ASCH domain AYJ52_07445 d8638ef841c7b03a91e1c5f29ba3f966 120 SUPERFAMILY SSF88697 1 119 1.44E-15 T 11-10-2018 IPR015947 PUA-like superfamily AYJ52_19190 8c2f702bd753fb3a5f8846e8f0891e21 66 Pfam PF14350 Beta protein 7 59 6.7E-12 T 11-10-2018 IPR025683 Protein beta AYJ52_11940 3278ebdf9e31ea800f6f69fe86b705d3 310 Pfam PF00892 EamA-like transporter family 5 136 1.8E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_11940 3278ebdf9e31ea800f6f69fe86b705d3 310 Pfam PF00892 EamA-like transporter family 158 286 2.2E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_11940 3278ebdf9e31ea800f6f69fe86b705d3 310 SUPERFAMILY SSF103481 40 140 7.45E-6 T 11-10-2018 AYJ52_13535 ededec80593527e77f813f388f7f253c 121 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 87 1.1E-15 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AYJ52_08270 f8669009e2bfecbe6cb0f3ea6f1ba33c 126 SUPERFAMILY SSF81296 29 122 1.82E-20 T 11-10-2018 IPR014756 Immunoglobulin E-set AYJ52_08270 f8669009e2bfecbe6cb0f3ea6f1ba33c 126 Pfam PF04234 CopC domain 30 121 2.1E-21 T 11-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 AYJ52_08270 f8669009e2bfecbe6cb0f3ea6f1ba33c 126 Gene3D G3DSA:2.60.40.1220 30 126 3.8E-21 T 11-10-2018 AYJ52_19400 d40582e31526cb1da188a7da3f84cf4d 277 Pfam PF07751 Abi-like protein 5 172 1.8E-4 T 11-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like AYJ52_04110 3eeec1b9e99464741390774b87340348 146 Pfam PF05258 Protein of unknown function (DUF721) 26 95 2.6E-4 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 AYJ52_04525 38dd86e35a3c1dba778cfa73727f88c6 608 Pfam PF05960 Bacterial protein of unknown function (DUF885) 67 597 2.5E-169 T 11-10-2018 IPR010281 Protein of unknown function DUF885 AYJ52_12945 3ad72412f4dde7517a1661ce93cd7074 210 Pfam PF01810 LysE type translocator 14 208 6.7E-21 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_18120 13179a083b662cce2986619dfd5dbcd4 698 Pfam PF02554 Carbon starvation protein CstA 38 414 2.4E-170 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AYJ52_18120 13179a083b662cce2986619dfd5dbcd4 698 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 597 1.1E-31 T 11-10-2018 IPR025299 CstA, C-terminal domain AYJ52_19255 80bea55c92724bbfa00ac3ef8d317ac6 300 Pfam PF14350 Beta protein 5 290 2.6E-44 T 11-10-2018 IPR025683 Protein beta AYJ52_09260 58ad6ae4b12eb481614b4ad4bf34ea8f 207 Pfam PF01810 LysE type translocator 18 204 3.9E-35 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_08010 506cd30684c2ffa326d79af9c59bbb51 903 Pfam PF01345 Domain of unknown function DUF11 807 900 2.6E-6 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_08010 506cd30684c2ffa326d79af9c59bbb51 903 Pfam PF01345 Domain of unknown function DUF11 216 325 3.4E-11 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_08010 506cd30684c2ffa326d79af9c59bbb51 903 SUPERFAMILY SSF49401 222 338 1.79E-8 T 11-10-2018 IPR008966 Adhesion domain superfamily AYJ52_08010 506cd30684c2ffa326d79af9c59bbb51 903 Gene3D G3DSA:2.60.40.740 213 350 6.3E-9 T 11-10-2018 AYJ52_08010 506cd30684c2ffa326d79af9c59bbb51 903 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 226 262 1.0E-11 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_08010 506cd30684c2ffa326d79af9c59bbb51 903 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 807 848 1.6E-7 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AYJ52_10030 a4dfa0d29930dc9ceb838d2c682ea7be 235 Pfam PF06912 Protein of unknown function (DUF1275) 21 216 4.1E-31 T 11-10-2018 IPR010699 Protein of unknown function DUF1275 AYJ52_15915 1bdb5fcd2f2bdb7df0287abd7db7c2da 401 Gene3D G3DSA:1.20.1250.20 2 388 3.9E-53 T 11-10-2018 AYJ52_15915 1bdb5fcd2f2bdb7df0287abd7db7c2da 401 SUPERFAMILY SSF103473 8 388 6.93E-52 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_15915 1bdb5fcd2f2bdb7df0287abd7db7c2da 401 Pfam PF07690 Major Facilitator Superfamily 11 269 1.9E-29 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_15915 1bdb5fcd2f2bdb7df0287abd7db7c2da 401 PRINTS PR01035 Tetracycline resistance protein signature 339 362 1.4E-15 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AYJ52_15915 1bdb5fcd2f2bdb7df0287abd7db7c2da 401 PRINTS PR01035 Tetracycline resistance protein signature 78 102 1.4E-15 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AYJ52_15915 1bdb5fcd2f2bdb7df0287abd7db7c2da 401 PRINTS PR01035 Tetracycline resistance protein signature 17 33 1.4E-15 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AYJ52_15915 1bdb5fcd2f2bdb7df0287abd7db7c2da 401 PRINTS PR01035 Tetracycline resistance protein signature 47 66 1.4E-15 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AYJ52_15915 1bdb5fcd2f2bdb7df0287abd7db7c2da 401 PRINTS PR01035 Tetracycline resistance protein signature 134 156 1.4E-15 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AYJ52_09135 5b4fbf11558d16bdf7d5da41f03cbbb7 183 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 17.921 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AYJ52_09135 5b4fbf11558d16bdf7d5da41f03cbbb7 183 Gene3D G3DSA:1.20.58.1610 2 121 5.1E-31 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09135 5b4fbf11558d16bdf7d5da41f03cbbb7 183 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 120 3.0E-25 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_06365 8e0db34b34c9210fc929c57be9ae32c5 135 Gene3D G3DSA:3.40.50.10110 1 134 1.3E-30 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AYJ52_06365 8e0db34b34c9210fc929c57be9ae32c5 135 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 130 1.4E-29 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AYJ52_06365 8e0db34b34c9210fc929c57be9ae32c5 135 SUPERFAMILY SSF102400 1 134 3.92E-32 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AYJ52_13330 c5514bd9094f3b3a94cff8bf99c835d1 146 Gene3D G3DSA:3.10.129.10 1 145 4.2E-39 T 11-10-2018 AYJ52_13330 c5514bd9094f3b3a94cff8bf99c835d1 146 Pfam PF01575 MaoC like domain 16 112 2.3E-12 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AYJ52_13330 c5514bd9094f3b3a94cff8bf99c835d1 146 SUPERFAMILY SSF54637 2 144 1.46E-30 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_18850 323b6abaa06d647be6cb0df5a7e913c3 278 SUPERFAMILY SSF56112 12 263 3.93E-33 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_18850 323b6abaa06d647be6cb0df5a7e913c3 278 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 10 256 3.1E-109 T 11-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 AYJ52_03625 7baf838eb738413e083eac39aa2df9b2 524 Pfam PF13148 Protein of unknown function (DUF3987) 58 435 4.4E-73 T 11-10-2018 IPR025048 Protein of unknown function DUF3987) AYJ52_12790 6d4d53444db14fc7313ec02d6a64a181 394 SUPERFAMILY SSF56935 32 315 6.77E-7 T 11-10-2018 AYJ52_15020 4f6bf42f3e4574de1459b44187757ac0 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 3.2E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15020 4f6bf42f3e4574de1459b44187757ac0 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 3.2E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15020 4f6bf42f3e4574de1459b44187757ac0 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 3.2E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15020 4f6bf42f3e4574de1459b44187757ac0 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 3.2E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15020 4f6bf42f3e4574de1459b44187757ac0 259 Pfam PF00561 alpha/beta hydrolase fold 22 124 2.5E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15020 4f6bf42f3e4574de1459b44187757ac0 259 Pfam PF00561 alpha/beta hydrolase fold 148 244 1.2E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AYJ52_15020 4f6bf42f3e4574de1459b44187757ac0 259 Gene3D G3DSA:3.40.50.1820 3 258 5.7E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15020 4f6bf42f3e4574de1459b44187757ac0 259 SUPERFAMILY SSF53474 5 257 1.15E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15020 4f6bf42f3e4574de1459b44187757ac0 259 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 257 1.9E-89 T 11-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 AYJ52_07035 b34333894fc3ca338983d8360c57f5ef 109 Pfam PF13591 MerR HTH family regulatory protein 28 107 1.5E-17 T 11-10-2018 AYJ52_07035 b34333894fc3ca338983d8360c57f5ef 109 Gene3D G3DSA:1.10.1660.10 20 109 3.9E-24 T 11-10-2018 AYJ52_02425 3a6d9154ce800762bcaf417fae109a64 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 154 23.482 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AYJ52_02425 3a6d9154ce800762bcaf417fae109a64 158 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site AYJ52_02425 3a6d9154ce800762bcaf417fae109a64 158 SUPERFAMILY SSF55486 17 156 1.61E-44 T 11-10-2018 AYJ52_02425 3a6d9154ce800762bcaf417fae109a64 158 Pfam PF02130 Uncharacterized protein family UPF0054 22 150 1.5E-36 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AYJ52_02425 3a6d9154ce800762bcaf417fae109a64 158 Gene3D G3DSA:3.40.390.30 1 158 6.6E-48 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 AYJ52_02425 3a6d9154ce800762bcaf417fae109a64 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 41 150 1.5E-34 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AYJ52_15425 2d791453290532afb13f8300c9e94c89 33 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 28 2.2E-14 T 11-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AYJ52_15425 2d791453290532afb13f8300c9e94c89 33 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.0E-12 T 11-10-2018 IPR012994 Membrane bound YbgT-like AYJ52_13960 4bd80acbea973a5931e81ed8f79311b6 395 Pfam PF05762 VWA domain containing CoxE-like protein 190 277 7.3E-8 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like AYJ52_10000 2b7928027c514954030b9a7b05a7e2a0 263 Gene3D G3DSA:2.40.160.90 129 263 4.7E-16 T 11-10-2018 AYJ52_10000 2b7928027c514954030b9a7b05a7e2a0 263 SUPERFAMILY SSF56925 111 262 1.49E-21 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AYJ52_10000 2b7928027c514954030b9a7b05a7e2a0 263 Pfam PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B 139 262 6.5E-6 T 11-10-2018 IPR001677 Transferrin-binding protein, C-lobe/N-lobe beta barrel domain AYJ52_01590 86254a8797d548ff47defaca6f782c40 307 Pfam PF03547 Membrane transport protein 2 145 2.0E-14 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AYJ52_01590 86254a8797d548ff47defaca6f782c40 307 Pfam PF03547 Membrane transport protein 155 296 1.1E-12 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AYJ52_04035 0b2805de0441d0d36f4f6f491aa766d9 352 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 5.1E-80 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AYJ52_04035 0b2805de0441d0d36f4f6f491aa766d9 352 Gene3D G3DSA:3.20.20.70 1 352 1.1E-131 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_04035 0b2805de0441d0d36f4f6f491aa766d9 352 SUPERFAMILY SSF51395 1 349 1.26E-112 T 11-10-2018 AYJ52_01745 19ad579dd99e9cfddc5d08593c40ca8e 213 Pfam PF03006 Haemolysin-III related 12 205 5.0E-34 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AYJ52_01745 19ad579dd99e9cfddc5d08593c40ca8e 213 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 212 6.3E-60 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AYJ52_07795 6ff9ec0d7f882e54a055b4c03e6047c4 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 110 306 9.8E-15 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AYJ52_15850 7329d62459ffef090991ded3b0ddcf71 84 Gene3D G3DSA:3.10.20.30 7 84 2.8E-7 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AYJ52_15850 7329d62459ffef090991ded3b0ddcf71 84 Pfam PF02597 ThiS family 22 84 2.1E-5 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AYJ52_15850 7329d62459ffef090991ded3b0ddcf71 84 SUPERFAMILY SSF54285 7 84 4.11E-7 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AYJ52_17695 619dfa7cd3644c98a8c71a403e5039a6 147 Pfam PF10881 Protein of unknown function (DUF2726) 38 146 1.2E-16 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 AYJ52_17695 619dfa7cd3644c98a8c71a403e5039a6 147 Gene3D G3DSA:3.40.960.10 41 147 5.7E-10 T 11-10-2018 AYJ52_09820 85ec3d2bd59d3495d619ec63404268a1 282 Gene3D G3DSA:3.60.20.10 1 259 3.3E-95 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_09820 85ec3d2bd59d3495d619ec63404268a1 282 Pfam PF13230 Glutamine amidotransferases class-II 1 266 4.1E-121 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 AYJ52_09820 85ec3d2bd59d3495d619ec63404268a1 282 SUPERFAMILY SSF56235 2 252 5.02E-48 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ52_14390 392f3204cb1d31edb42a8de01f9f31cd 324 Pfam PF16223 Domain of unknown function (DUF4882) 49 322 1.8E-136 T 11-10-2018 IPR032620 Protein of unknown function DUF4882 AYJ52_01425 6174a0633a2d42e5f9c2b58a80d9a42a 122 PIRSF PIRSF016789 1 122 3.8E-29 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AYJ52_01425 6174a0633a2d42e5f9c2b58a80d9a42a 122 Pfam PF04304 Protein of unknown function (DUF454) 4 117 2.0E-35 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AYJ52_15435 db891c6cdf01824b049df3403d4d19fd 174 SUPERFAMILY SSF55729 1 151 1.68E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_15435 db891c6cdf01824b049df3403d4d19fd 174 Pfam PF00583 Acetyltransferase (GNAT) family 50 142 4.2E-8 T 11-10-2018 IPR000182 GNAT domain AYJ52_15435 db891c6cdf01824b049df3403d4d19fd 174 Gene3D G3DSA:3.40.630.30 1 155 3.6E-17 T 11-10-2018 AYJ52_10160 a0a7986ab93ab8a0c32b80a4c36914a0 101 SUPERFAMILY SSF50022 1 101 2.1E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_10160 a0a7986ab93ab8a0c32b80a4c36914a0 101 Gene3D G3DSA:2.102.10.10 1 101 6.1E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AYJ52_10160 a0a7986ab93ab8a0c32b80a4c36914a0 101 Pfam PF00355 Rieske [2Fe-2S] domain 2 89 2.8E-21 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AYJ52_08900 aa619d87446b56ddf4a065c20ba785e1 409 Pfam PF02515 CoA-transferase family III 4 382 2.2E-129 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 AYJ52_08900 aa619d87446b56ddf4a065c20ba785e1 409 SUPERFAMILY SSF89796 1 404 3.27E-136 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AYJ52_08900 aa619d87446b56ddf4a065c20ba785e1 409 Gene3D G3DSA:3.30.1540.10 242 333 9.2E-135 T 11-10-2018 AYJ52_08900 aa619d87446b56ddf4a065c20ba785e1 409 Gene3D G3DSA:3.40.50.10540 4 397 9.2E-135 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AYJ52_12115 8832ccdbff057e21533fa2a7860776ea 385 Pfam PF06224 Winged helix DNA-binding domain 32 367 9.3E-68 T 11-10-2018 IPR009351 Protein of unknown function DUF1006 AYJ52_06105 ce6476deed8d12c6b469de75f3229cc9 429 Gene3D G3DSA:2.40.160.10 12 429 3.3E-149 T 11-10-2018 IPR023614 Porin domain superfamily AYJ52_06105 ce6476deed8d12c6b469de75f3229cc9 429 Pfam PF03573 outer membrane porin, OprD family 30 427 1.7E-110 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AYJ52_14305 d944fd8cbc5cab71cd1a8cab86cc4485 94 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 12 92 1.5E-35 T 11-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AYJ52_14305 d944fd8cbc5cab71cd1a8cab86cc4485 94 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 29 91 3.6E-13 T 11-10-2018 IPR008792 Coenzyme PQQ synthesis D AYJ52_14305 d944fd8cbc5cab71cd1a8cab86cc4485 94 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 6 93 24.443 T 11-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AYJ52_14305 d944fd8cbc5cab71cd1a8cab86cc4485 94 Gene3D G3DSA:1.10.10.1150 3 93 5.0E-22 T 11-10-2018 AYJ52_16520 95f7b5504227f8b34e4f34c5bbac31ec 1502 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1155 1502 5.0E-43 T 11-10-2018 IPR007452 Translocation and assembly module TamB AYJ52_02060 856a5d226ff5e01d36483aadf45c6b38 283 SUPERFAMILY SSF89550 4 264 2.35E-40 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AYJ52_02060 856a5d226ff5e01d36483aadf45c6b38 283 SMART SM00481 4 69 1.6E-15 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AYJ52_02060 856a5d226ff5e01d36483aadf45c6b38 283 Gene3D G3DSA:3.20.20.140 4 256 4.8E-67 T 11-10-2018 AYJ52_02060 856a5d226ff5e01d36483aadf45c6b38 283 Gene3D G3DSA:1.10.150.650 102 175 4.8E-67 T 11-10-2018 AYJ52_02060 856a5d226ff5e01d36483aadf45c6b38 283 Pfam PF02811 PHP domain 5 135 1.3E-10 T 11-10-2018 IPR004013 PHP domain GO:0003824 AYJ52_04390 80da0dd9c66cc02c48426abd20a8a9c5 406 Gene3D G3DSA:2.60.120.580 47 214 1.7E-15 T 11-10-2018 AYJ52_04390 80da0dd9c66cc02c48426abd20a8a9c5 406 Gene3D G3DSA:2.60.120.580 216 313 5.3E-29 T 11-10-2018 AYJ52_04390 80da0dd9c66cc02c48426abd20a8a9c5 406 Pfam PF03069 Acetamidase/Formamidase family 243 386 8.3E-26 T 11-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 AYJ52_04390 80da0dd9c66cc02c48426abd20a8a9c5 406 Pfam PF03069 Acetamidase/Formamidase family 129 240 6.5E-9 T 11-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 AYJ52_04390 80da0dd9c66cc02c48426abd20a8a9c5 406 SUPERFAMILY SSF141130 50 400 1.07E-81 T 11-10-2018 AYJ52_04390 80da0dd9c66cc02c48426abd20a8a9c5 406 Gene3D G3DSA:3.10.28.20 322 402 4.9E-22 T 11-10-2018 AYJ52_16030 7a8b843747fe15d435b7cda61f5c94f4 155 SUPERFAMILY SSF46785 12 113 7.71E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_16030 7a8b843747fe15d435b7cda61f5c94f4 155 Gene3D G3DSA:1.10.10.10 9 148 8.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_16030 7a8b843747fe15d435b7cda61f5c94f4 155 Pfam PF01638 HxlR-like helix-turn-helix 24 113 9.7E-16 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AYJ52_14035 c492b2b58fb0ae33e0859d9676aaef27 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 281 9.3E-57 T 11-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 AYJ52_11575 071af8dff01a264e3909b8dac1441564 413 Gene3D G3DSA:3.20.20.70 5 358 2.3E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_11575 071af8dff01a264e3909b8dac1441564 413 SUPERFAMILY SSF51395 6 345 1.49E-100 T 11-10-2018 AYJ52_11575 071af8dff01a264e3909b8dac1441564 413 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 344 2.1E-57 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AYJ52_08740 e2813f72ddbe95ded725beb63216ec09 277 Gene3D G3DSA:3.90.70.10 51 208 7.4E-29 T 11-10-2018 AYJ52_08740 e2813f72ddbe95ded725beb63216ec09 277 Pfam PF03412 Peptidase C39 family 63 198 2.5E-15 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AYJ52_10850 526beadfe688116825b0fafb99e69479 235 Pfam PF02743 Cache domain 8 205 6.6E-14 T 11-10-2018 IPR033479 Double Cache domain 1 AYJ52_10850 526beadfe688116825b0fafb99e69479 235 Gene3D G3DSA:3.30.450.20 3 180 9.1E-21 T 11-10-2018 AYJ52_07340 71efe8246e1579dbb94b25bfc7e5aecd 336 Pfam PF12833 Helix-turn-helix domain 254 332 7.6E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_07340 71efe8246e1579dbb94b25bfc7e5aecd 336 SMART SM00342 248 330 3.8E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AYJ52_07340 71efe8246e1579dbb94b25bfc7e5aecd 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 202 1.3E-35 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AYJ52_07340 71efe8246e1579dbb94b25bfc7e5aecd 336 SUPERFAMILY SSF46689 283 333 5.82E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AYJ52_07340 71efe8246e1579dbb94b25bfc7e5aecd 336 Gene3D G3DSA:1.10.10.60 228 336 1.1E-25 T 11-10-2018 AYJ52_07170 a880008f2b38ef2a98a808a7801481f4 432 SUPERFAMILY SSF56112 93 354 2.47E-20 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AYJ52_07170 a880008f2b38ef2a98a808a7801481f4 432 Pfam PF03109 ABC1 family 111 228 5.4E-32 T 11-10-2018 IPR004147 UbiB domain AYJ52_11030 c6c1ac8186f2200eff1f9c3e0be191ba 390 Gene3D G3DSA:2.40.160.10 19 390 3.1E-62 T 11-10-2018 IPR023614 Porin domain superfamily AYJ52_11030 c6c1ac8186f2200eff1f9c3e0be191ba 390 Pfam PF03573 outer membrane porin, OprD family 27 390 1.2E-34 T 11-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 AYJ52_12600 b9ad1faa03baea0a5e56b026d6dd75d7 288 SMART SM00062 53 275 2.8E-69 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_12600 b9ad1faa03baea0a5e56b026d6dd75d7 288 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 270 1.9E-50 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ52_12600 b9ad1faa03baea0a5e56b026d6dd75d7 288 Gene3D G3DSA:3.40.190.10 143 233 1.6E-76 T 11-10-2018 AYJ52_12600 b9ad1faa03baea0a5e56b026d6dd75d7 288 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 76 89 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AYJ52_12600 b9ad1faa03baea0a5e56b026d6dd75d7 288 Gene3D G3DSA:3.40.190.10 48 268 1.6E-76 T 11-10-2018 AYJ52_12600 b9ad1faa03baea0a5e56b026d6dd75d7 288 SUPERFAMILY SSF53850 12 270 4.49E-58 T 11-10-2018 AYJ52_05430 0d300f801f9afb64e8ac2e6185076939 191 Pfam PF13548 Domain of unknown function (DUF4126) 7 180 1.3E-49 T 11-10-2018 IPR025196 Domain of unknown function DUF4126 AYJ52_09195 0d7c5130917fbdf7021d4764cf476765 497 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 6.3E-6 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09195 0d7c5130917fbdf7021d4764cf476765 497 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 6.3E-6 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09195 0d7c5130917fbdf7021d4764cf476765 497 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 324 343 6.3E-6 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09195 0d7c5130917fbdf7021d4764cf476765 497 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 6.3E-6 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09195 0d7c5130917fbdf7021d4764cf476765 497 Pfam PF00361 Proton-conducting membrane transporter 127 423 7.4E-72 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AYJ52_09195 0d7c5130917fbdf7021d4764cf476765 497 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 10 478 2.3E-123 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AYJ52_09195 0d7c5130917fbdf7021d4764cf476765 497 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 478 17.385 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AYJ52_19130 15b6e60da39c1ce202f0c76fa8962c69 98 SUPERFAMILY SSF53098 13 88 5.31E-18 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AYJ52_19130 15b6e60da39c1ce202f0c76fa8962c69 98 Pfam PF13683 Integrase core domain 12 77 5.6E-16 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 AYJ52_04945 ed9aaac1649d9ea2cf950cd2036529d9 87 Gene3D G3DSA:1.20.58.1000 1 87 3.4E-24 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily AYJ52_04945 ed9aaac1649d9ea2cf950cd2036529d9 87 Pfam PF02583 Metal-sensitive transcriptional repressor 7 85 4.1E-23 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AYJ52_01375 463c8c21486f2bb2bc414e9f62d2b7f1 191 Pfam PF14317 YcxB-like protein 108 182 4.0E-20 T 11-10-2018 IPR025588 YcxB-like protein AYJ52_03705 04dcdc75286d2953f94fe7da393f22b1 247 Gene3D G3DSA:1.25.40.10 23 111 1.1E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_03705 04dcdc75286d2953f94fe7da393f22b1 247 SUPERFAMILY SSF48452 26 110 2.63E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_18410 145af2fb9d904caafa2fd9fe8e83c8f8 262 Gene3D G3DSA:3.30.70.580 1 66 4.0E-18 T 11-10-2018 AYJ52_18410 145af2fb9d904caafa2fd9fe8e83c8f8 262 Gene3D G3DSA:3.30.70.1560 67 167 1.3E-39 T 11-10-2018 AYJ52_18410 145af2fb9d904caafa2fd9fe8e83c8f8 262 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 179 1.4E-46 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AYJ52_18410 145af2fb9d904caafa2fd9fe8e83c8f8 262 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 38 52 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AYJ52_18410 145af2fb9d904caafa2fd9fe8e83c8f8 262 Pfam PF00849 RNA pseudouridylate synthase 3 147 4.4E-11 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_18410 145af2fb9d904caafa2fd9fe8e83c8f8 262 SUPERFAMILY SSF55120 3 188 4.32E-36 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AYJ52_14910 8aeef44f4baad9ca30b34536748fb71e 339 PIRSF PIRSF038896 8 330 5.9E-90 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AYJ52_14910 8aeef44f4baad9ca30b34536748fb71e 339 SUPERFAMILY SSF56281 78 330 7.73E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_14910 8aeef44f4baad9ca30b34536748fb71e 339 Gene3D G3DSA:3.60.15.10 61 335 1.5E-78 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ52_14910 8aeef44f4baad9ca30b34536748fb71e 339 Pfam PF12706 Beta-lactamase superfamily domain 95 287 6.3E-44 T 11-10-2018 IPR001279 Metallo-beta-lactamase AYJ52_10230 bb2ac09cd6650b15fc316ec962fdf259 432 Gene3D G3DSA:1.20.1250.20 18 431 1.8E-56 T 11-10-2018 AYJ52_10230 bb2ac09cd6650b15fc316ec962fdf259 432 SUPERFAMILY SSF103473 10 427 7.59E-61 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_10230 bb2ac09cd6650b15fc316ec962fdf259 432 Pfam PF07690 Major Facilitator Superfamily 66 301 1.1E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_01230 08eaedeb9d8288bea0aade68db984d3e 476 SUPERFAMILY SSF56935 14 476 3.48E-55 T 11-10-2018 AYJ52_01230 08eaedeb9d8288bea0aade68db984d3e 476 Gene3D G3DSA:2.40.160.60 163 476 5.5E-23 T 11-10-2018 AYJ52_01230 08eaedeb9d8288bea0aade68db984d3e 476 Gene3D G3DSA:2.40.160.60 30 140 5.8E-8 T 11-10-2018 AYJ52_01230 08eaedeb9d8288bea0aade68db984d3e 476 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 42 476 4.6E-15 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AYJ52_09725 f0b806e008f12df5032249eaf502b811 291 PIRSF PIRSF007580 2 290 7.5E-72 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_09725 f0b806e008f12df5032249eaf502b811 291 Pfam PF10118 Predicted metal-dependent hydrolase 17 277 7.6E-77 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_06335 18fd3d38a6f299a93d365f5a6253e49b 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 80.808 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AYJ52_06335 18fd3d38a6f299a93d365f5a6253e49b 152 Pfam PF03477 ATP cone domain 50 136 5.8E-18 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AYJ52_06335 18fd3d38a6f299a93d365f5a6253e49b 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 6.4E-60 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AYJ52_14375 2fb404cb7ec5f570e6fd8f241fa098b3 385 Pfam PF00199 Catalase 88 195 7.0E-7 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_14375 2fb404cb7ec5f570e6fd8f241fa098b3 385 Gene3D G3DSA:1.20.1280.120 81 368 2.5E-24 T 11-10-2018 AYJ52_14375 2fb404cb7ec5f570e6fd8f241fa098b3 385 Gene3D G3DSA:2.40.180.20 94 357 2.5E-24 T 11-10-2018 AYJ52_14375 2fb404cb7ec5f570e6fd8f241fa098b3 385 SUPERFAMILY SSF56634 60 378 1.96E-53 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AYJ52_11770 477ac756f129f4ad397a47993ab36e35 286 SUPERFAMILY SSF103481 46 135 1.83E-6 T 11-10-2018 AYJ52_11770 477ac756f129f4ad397a47993ab36e35 286 Pfam PF00892 EamA-like transporter family 146 275 7.8E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AYJ52_11770 477ac756f129f4ad397a47993ab36e35 286 SUPERFAMILY SSF103481 181 280 1.96E-11 T 11-10-2018 AYJ52_04415 219daaa4ca02f6ac1af6f3e850814a0d 159 Gene3D G3DSA:3.30.1050.10 27 137 1.9E-5 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AYJ52_05910 0421a245eac3008324192f7b723b13b7 384 SUPERFAMILY SSF54106 55 103 7.06E-7 T 11-10-2018 AYJ52_05910 0421a245eac3008324192f7b723b13b7 384 Gene3D G3DSA:3.10.350.10 56 101 2.1E-12 T 11-10-2018 IPR036779 LysM domain superfamily AYJ52_05910 0421a245eac3008324192f7b723b13b7 384 Pfam PF01476 LysM domain 57 102 2.2E-12 T 11-10-2018 IPR018392 LysM domain AYJ52_11960 4c60d07b53b20acb9f4517e869c28bdd 217 Pfam PF09347 Domain of unknown function (DUF1989) 15 186 8.4E-65 T 11-10-2018 IPR018959 Protein of unknown function DUF1989 AYJ52_11960 4c60d07b53b20acb9f4517e869c28bdd 217 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 10 211 2.1E-93 T 11-10-2018 IPR017791 Urea carboxylase-associated protein 1 AYJ52_06550 3e770c347b3f451820893c59784be9fe 146 SUPERFAMILY SSF54637 7 134 6.18E-35 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_06550 3e770c347b3f451820893c59784be9fe 146 Gene3D G3DSA:3.10.129.10 1 138 5.4E-42 T 11-10-2018 AYJ52_06550 3e770c347b3f451820893c59784be9fe 146 Pfam PF13279 Thioesterase-like superfamily 15 131 2.5E-19 T 11-10-2018 AYJ52_07400 868907abf0b6bf83e3a92cbae7fb7538 81 Pfam PF04102 SlyX 16 81 1.3E-16 T 11-10-2018 IPR007236 SlyX AYJ52_13995 cd86288c7e50030aed0b8e3654876c77 379 Gene3D G3DSA:3.30.450.40 9 192 4.3E-28 T 11-10-2018 IPR029016 GAF-like domain superfamily AYJ52_11620 42d41dd9619db5deef757fbba03395f7 287 Pfam PF13557 Putative MetA-pathway of phenol degradation 51 266 8.7E-21 T 11-10-2018 IPR025737 MetA-pathway of phenol degradation, putative AYJ52_09300 669a76ae956b94b64c57f5735b0430bb 197 Pfam PF01810 LysE type translocator 12 182 3.7E-12 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_17595 0d15692814da3c5417b521d59fe623af 380 SUPERFAMILY SSF56925 139 380 1.73E-16 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AYJ52_17595 0d15692814da3c5417b521d59fe623af 380 Pfam PF03922 OmpW family 139 380 1.4E-18 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AYJ52_02270 23829d4a7fbd48ee49fff77a4fa902b6 186 SUPERFAMILY SSF52540 5 169 5.58E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_02270 23829d4a7fbd48ee49fff77a4fa902b6 186 Gene3D G3DSA:3.40.50.300 3 180 3.5E-19 T 11-10-2018 AYJ52_02270 23829d4a7fbd48ee49fff77a4fa902b6 186 Pfam PF03029 Conserved hypothetical ATP binding protein 32 101 1.6E-5 T 11-10-2018 IPR004130 GPN-loop GTPase AYJ52_04050 13ad383d528ff75e0e452c0d6656b179 255 SUPERFAMILY SSF56935 32 255 1.2E-7 T 11-10-2018 AYJ52_04050 13ad383d528ff75e0e452c0d6656b179 255 Pfam PF16956 Putative general bacterial porin 189 244 5.0E-7 T 11-10-2018 IPR031593 Putative general bacterial porin AYJ52_04050 13ad383d528ff75e0e452c0d6656b179 255 Pfam PF16956 Putative general bacterial porin 1 149 2.3E-17 T 11-10-2018 IPR031593 Putative general bacterial porin AYJ52_01490 33c7dbfb88aff45051df9734550c654d 127 SUPERFAMILY SSF52172 6 126 1.71E-38 T 11-10-2018 IPR011006 CheY-like superfamily AYJ52_01490 33c7dbfb88aff45051df9734550c654d 127 Gene3D G3DSA:3.40.50.12740 7 127 9.0E-41 T 11-10-2018 AYJ52_01490 33c7dbfb88aff45051df9734550c654d 127 Pfam PF00072 Response regulator receiver domain 10 122 5.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_01490 33c7dbfb88aff45051df9734550c654d 127 SMART SM00448 8 121 8.2E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AYJ52_12330 f786a4c850ce451b87f2ff85df5d4ed5 323 SUPERFAMILY SSF51412 1 315 6.54E-70 T 11-10-2018 AYJ52_12330 f786a4c850ce451b87f2ff85df5d4ed5 323 Gene3D G3DSA:3.20.20.70 1 323 1.8E-117 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_12330 f786a4c850ce451b87f2ff85df5d4ed5 323 Pfam PF03060 Nitronate monooxygenase 3 310 2.6E-63 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AYJ52_09865 d087736ea45074f43b0f215256171fb0 1198 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1089 1156 1.4E-10 T 11-10-2018 AYJ52_09865 d087736ea45074f43b0f215256171fb0 1198 SUPERFAMILY SSF52540 1001 1175 2.07E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_09865 d087736ea45074f43b0f215256171fb0 1198 Pfam PF13476 AAA domain 5 281 2.5E-23 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain AYJ52_09865 d087736ea45074f43b0f215256171fb0 1198 Gene3D G3DSA:3.40.50.300 932 1198 9.4E-28 T 11-10-2018 AYJ52_09865 d087736ea45074f43b0f215256171fb0 1198 Gene3D G3DSA:3.40.50.300 1 290 1.8E-41 T 11-10-2018 AYJ52_09865 d087736ea45074f43b0f215256171fb0 1198 SUPERFAMILY SSF52540 1 289 7.46E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13345 77fc3fda508c30bd63a783203d7a20e8 226 Pfam PF06912 Protein of unknown function (DUF1275) 14 209 1.6E-30 T 11-10-2018 IPR010699 Protein of unknown function DUF1275 AYJ52_16250 55887bc1baf0b285a230cbf5150c58d9 131 Gene3D G3DSA:1.10.10.10 1 80 4.6E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ52_16250 55887bc1baf0b285a230cbf5150c58d9 131 SUPERFAMILY SSF46785 2 130 1.7E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AYJ52_16250 55887bc1baf0b285a230cbf5150c58d9 131 Pfam PF01475 Ferric uptake regulator family 9 130 3.6E-17 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AYJ52_06775 364e0f83ec74730501fa803e47e19d8f 264 SUPERFAMILY SSF54637 4 107 5.11E-18 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_06775 364e0f83ec74730501fa803e47e19d8f 264 Pfam PF13622 Thioesterase-like superfamily 19 262 1.5E-42 T 11-10-2018 AYJ52_06775 364e0f83ec74730501fa803e47e19d8f 264 Gene3D G3DSA:3.10.129.90 8 263 2.4E-59 T 11-10-2018 AYJ52_06775 364e0f83ec74730501fa803e47e19d8f 264 SUPERFAMILY SSF54637 114 262 8.53E-22 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_05710 e1520c1e55febb32e9001477f6124968 280 SUPERFAMILY SSF52540 3 278 4.78E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_05710 e1520c1e55febb32e9001477f6124968 280 Pfam PF13614 AAA domain 6 206 2.0E-37 T 11-10-2018 IPR025669 AAA domain AYJ52_05710 e1520c1e55febb32e9001477f6124968 280 Gene3D G3DSA:3.40.50.300 2 280 3.9E-59 T 11-10-2018 AYJ52_01890 226b0dd1f18c3a9a0f8e5c54dfc79a25 160 Pfam PF06146 Phosphate-starvation-inducible E 54 122 3.7E-17 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like AYJ52_01890 226b0dd1f18c3a9a0f8e5c54dfc79a25 160 PIRSF PIRSF029598 2 140 7.6E-34 T 11-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AYJ52_11435 565fa6526500c127d66556409d9f22ae 197 Pfam PF01810 LysE type translocator 12 189 6.0E-10 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_05725 81189320cf86fb494121edc2216bcb67 213 Pfam PF09335 SNARE associated Golgi protein 45 171 8.7E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein AYJ52_18620 13d19867dca193400de6d23e42dace64 124 Pfam PF16137 Domain of unknown function (DUF4845) 30 112 1.7E-16 T 11-10-2018 IPR032314 Protein of unknown function DUF4845 AYJ52_13585 4af51a9b6d7bcffb808dcac19f4b8b80 292 Pfam PF01618 MotA/TolQ/ExbB proton channel family 163 265 2.0E-34 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AYJ52_03800 69429c491d22c27c3a577f8d8213402f 303 Gene3D G3DSA:3.60.10.10 2 298 9.4E-13 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AYJ52_03800 69429c491d22c27c3a577f8d8213402f 303 SUPERFAMILY SSF56219 5 299 3.4E-19 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AYJ52_07120 38cb3e56038a2a318a2ef75a350bd849 334 Pfam PF13271 Domain of unknown function (DUF4062) 7 85 3.3E-14 T 11-10-2018 IPR025139 Domain of unknown function DUF4062 AYJ52_15445 fc02d530993e23ccfbbfb332ecb09f7f 198 Gene3D G3DSA:3.40.109.10 1 198 2.2E-81 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_15445 fc02d530993e23ccfbbfb332ecb09f7f 198 SUPERFAMILY SSF55469 4 197 1.11E-66 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AYJ52_15445 fc02d530993e23ccfbbfb332ecb09f7f 198 Pfam PF00881 Nitroreductase family 8 176 2.3E-15 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AYJ52_10505 ba9d125f030b2cd10caa1a693c583e42 221 Gene3D G3DSA:1.10.4190.10 3 200 4.4E-45 T 11-10-2018 IPR038277 UreF domain superfamily AYJ52_10505 ba9d125f030b2cd10caa1a693c583e42 221 Pfam PF01730 UreF 40 179 1.4E-29 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AYJ52_10505 ba9d125f030b2cd10caa1a693c583e42 221 PIRSF PIRSF009467 5 221 1.1E-56 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AYJ52_10505 ba9d125f030b2cd10caa1a693c583e42 221 Hamap MF_01385 Urease accessory protein UreF [ureF]. 8 221 26.757 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AYJ52_17260 48254feeabd161cd9203576dd49e7459 121 Pfam PF04241 Protein of unknown function (DUF423) 16 102 6.7E-26 T 11-10-2018 IPR006696 Protein of unknown function DUF423 AYJ52_08385 fbba1f8f18f03c8ec7c9d88a38f389eb 104 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 5 99 6.0E-35 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AYJ52_01170 8232cb844169e02c806f9f5e4697ca08 62 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 48 1.4E-5 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AYJ52_15070 e3afbc9e45b366392f55be1e77da0958 175 SUPERFAMILY SSF54427 7 163 6.69E-22 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_15070 e3afbc9e45b366392f55be1e77da0958 175 Gene3D G3DSA:3.10.450.50 11 160 1.7E-23 T 11-10-2018 AYJ52_15070 e3afbc9e45b366392f55be1e77da0958 175 Pfam PF13577 SnoaL-like domain 16 150 7.1E-20 T 11-10-2018 IPR037401 SnoaL-like domain AYJ52_00675 7d01cf790f85c76639322b11b72f539c 238 SUPERFAMILY SSF55486 172 236 6.83E-7 T 11-10-2018 AYJ52_15170 09c16fb09979c35119683418e18c259c 439 Gene3D G3DSA:2.40.160.180 26 439 4.5E-120 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily AYJ52_15170 09c16fb09979c35119683418e18c259c 439 Pfam PF04966 Carbohydrate-selective porin, OprB family 71 439 8.0E-93 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 AYJ52_14835 92c7e8c05581ed494db2b691ceba9212 139 Pfam PF07681 DoxX 22 100 8.6E-19 T 11-10-2018 IPR032808 DoxX family AYJ52_19730 e3fa9a5548e7f066c401108e106594cf 104 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 41 96 3.1E-21 T 11-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system AYJ52_04575 cbe7541c4dd87c3d9615998dbc4a717a 228 Pfam PF08291 Peptidase M15 113 181 2.6E-8 T 11-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 AYJ52_04575 cbe7541c4dd87c3d9615998dbc4a717a 228 Gene3D G3DSA:3.30.1380.10 81 216 1.7E-6 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AYJ52_04575 cbe7541c4dd87c3d9615998dbc4a717a 228 SUPERFAMILY SSF55166 83 219 2.9E-15 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AYJ52_01810 1ffe77fc40fe5af9a565b92f6bcc667b 331 Pfam PF10974 Protein of unknown function (DUF2804) 7 330 9.8E-64 T 11-10-2018 IPR021243 Protein of unknown function DUF2804 AYJ52_07430 5524ad432d1860cf9f043a2003ff9e34 190 Pfam PF03729 Short repeat of unknown function (DUF308) 22 91 5.3E-9 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane AYJ52_07430 5524ad432d1860cf9f043a2003ff9e34 190 Pfam PF03729 Short repeat of unknown function (DUF308) 86 148 3.5E-6 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane AYJ52_16305 89a5292ddbd8a2779ca26b58d0f0ac59 339 SMART SM00972 270 336 5.9E-20 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_16305 89a5292ddbd8a2779ca26b58d0f0ac59 339 Pfam PF05229 Spore Coat Protein U domain 194 336 5.9E-27 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_13580 ef8b5cd16ac7c741d8b9e6ef0c753068 140 Gene3D G3DSA:3.30.420.270 63 132 7.2E-10 T 11-10-2018 AYJ52_13580 ef8b5cd16ac7c741d8b9e6ef0c753068 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 136 1.3E-28 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AYJ52_15845 909f3527acd3f3e6d3ec6a967440b1cb 161 Gene3D G3DSA:3.90.1170.40 3 147 1.5E-40 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AYJ52_15845 909f3527acd3f3e6d3ec6a967440b1cb 161 Pfam PF02391 MoaE protein 23 119 1.8E-32 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AYJ52_15845 909f3527acd3f3e6d3ec6a967440b1cb 161 SUPERFAMILY SSF54690 17 139 4.45E-38 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AYJ52_01855 bab1601bbbdc0edd4c083dd250a577c3 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 3 446 4.5E-117 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 AYJ52_15920 bfe6e2e5fc4d3b201612157de914b864 1175 Pfam PF04183 IucA / IucC family 722 966 1.4E-60 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AYJ52_15920 bfe6e2e5fc4d3b201612157de914b864 1175 Pfam PF04183 IucA / IucC family 155 378 1.4E-49 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AYJ52_15920 bfe6e2e5fc4d3b201612157de914b864 1175 Gene3D G3DSA:1.10.510.40 403 568 1.2E-18 T 11-10-2018 AYJ52_15920 bfe6e2e5fc4d3b201612157de914b864 1175 Gene3D G3DSA:1.10.510.40 955 1173 5.7E-62 T 11-10-2018 AYJ52_15920 bfe6e2e5fc4d3b201612157de914b864 1175 Pfam PF06276 Ferric iron reductase FhuF-like transporter 986 1154 1.1E-27 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain AYJ52_15920 bfe6e2e5fc4d3b201612157de914b864 1175 Pfam PF06276 Ferric iron reductase FhuF-like transporter 413 559 4.4E-27 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain AYJ52_05305 be98504e3e97b868311e72bc7a7165e9 420 Pfam PF01943 Polysaccharide biosynthesis protein 11 269 3.0E-11 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AYJ52_09250 72260d7ba7f4fa74c0261ecf062bbf18 547 SUPERFAMILY SSF103473 25 449 5.62E-22 T 11-10-2018 IPR036259 MFS transporter superfamily AYJ52_09250 72260d7ba7f4fa74c0261ecf062bbf18 547 Pfam PF07690 Major Facilitator Superfamily 44 439 5.6E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AYJ52_09250 72260d7ba7f4fa74c0261ecf062bbf18 547 Gene3D G3DSA:1.20.1250.20 33 228 1.8E-17 T 11-10-2018 AYJ52_15060 3c080e5b93aeb2204dbce0cf7bd7ac37 161 Gene3D G3DSA:3.10.450.50 1 161 9.2E-35 T 11-10-2018 AYJ52_15060 3c080e5b93aeb2204dbce0cf7bd7ac37 161 Pfam PF00866 Ring hydroxylating beta subunit 18 151 4.4E-21 T 11-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 AYJ52_15060 3c080e5b93aeb2204dbce0cf7bd7ac37 161 SUPERFAMILY SSF54427 3 161 3.43E-37 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_05345 24fd2e88b1b7402629eec1c925cbb155 287 Gene3D G3DSA:3.20.20.70 61 275 9.8E-9 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_15755 56453b374af3850f651fa0e47587e5db 147 Gene3D G3DSA:3.30.70.100 1 126 1.2E-31 T 11-10-2018 AYJ52_15755 56453b374af3850f651fa0e47587e5db 147 SUPERFAMILY SSF54975 3 136 6.21E-35 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AYJ52_15755 56453b374af3850f651fa0e47587e5db 147 SMART SM01034 3 98 2.7E-36 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AYJ52_15755 56453b374af3850f651fa0e47587e5db 147 Pfam PF04940 Sensors of blue-light using FAD 4 97 1.0E-26 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 AYJ52_08775 ca8a156a535de89bf4e547330173fb50 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 123 3.9E-11 T 11-10-2018 IPR001451 Hexapeptide repeat AYJ52_08775 ca8a156a535de89bf4e547330173fb50 176 SUPERFAMILY SSF51161 20 172 7.07E-46 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AYJ52_08775 ca8a156a535de89bf4e547330173fb50 176 Gene3D G3DSA:2.160.10.10 1 173 3.5E-63 T 11-10-2018 AYJ52_17190 16bb7a93051fb1b83d9cdc912a303d72 610 Pfam PF01435 Peptidase family M48 89 300 1.8E-6 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AYJ52_17190 16bb7a93051fb1b83d9cdc912a303d72 610 Gene3D G3DSA:3.30.2010.10 73 164 1.5E-14 T 11-10-2018 AYJ52_01245 28585cddf1397069e6f748d6660fd1a2 461 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 448 1.5E-154 T 11-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AYJ52_01245 28585cddf1397069e6f748d6660fd1a2 461 Pfam PF06974 Protein of unknown function (DUF1298) 302 445 1.7E-41 T 11-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AYJ52_01245 28585cddf1397069e6f748d6660fd1a2 461 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 263 6.7E-67 T 11-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AYJ52_11555 e842e173dc8e94a69a5d7b175ab77b4e 199 Pfam PF05401 Nodulation protein S (NodS) 16 141 5.1E-16 T 11-10-2018 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 AYJ52_11555 e842e173dc8e94a69a5d7b175ab77b4e 199 SUPERFAMILY SSF53335 5 166 2.84E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ52_11555 e842e173dc8e94a69a5d7b175ab77b4e 199 Gene3D G3DSA:3.40.50.150 24 187 1.6E-37 T 11-10-2018 AYJ52_02065 5db2e94c42cc400d38ba772d120775f2 204 Pfam PF04279 Intracellular septation protein A 1 201 2.2E-47 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AYJ52_02065 5db2e94c42cc400d38ba772d120775f2 204 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 202 15.827 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AYJ52_19705 9d0457a9a810d99631b29590828b8d71 145 Pfam PF03811 InsA N-terminal domain 4 36 2.0E-6 T 11-10-2018 IPR003220 InsA N-terminal domain GO:0006313 AYJ52_19705 9d0457a9a810d99631b29590828b8d71 145 Pfam PF03400 IS1 transposase 104 144 1.2E-10 T 11-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 AYJ52_05730 2bb7e51912ad9b3ad1da82aaf6f29cc5 145 Pfam PF07681 DoxX 23 100 8.0E-17 T 11-10-2018 IPR032808 DoxX family AYJ52_18320 d29f1d9cdcfecab1d985fd1814246baf 338 Pfam PF01594 AI-2E family transporter 15 329 9.3E-12 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AYJ52_17095 9e7ebf86a65d5001a03024da046f5eca 411 Pfam PF03616 Sodium/glutamate symporter 4 379 3.5E-139 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AYJ52_17095 9e7ebf86a65d5001a03024da046f5eca 411 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 410 1.0E-151 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AYJ52_17095 9e7ebf86a65d5001a03024da046f5eca 411 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 410 24.931 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AYJ52_03970 33c9d3536a9b53e3478b597d8548c1f2 110 Pfam PF04341 Protein of unknown function, DUF485 11 96 2.4E-30 T 11-10-2018 IPR007436 Protein of unknown function DUF485 AYJ52_11120 1de0b21b1ce2550435e96c2fc4e79ed0 439 Pfam PF00860 Permease family 27 398 4.4E-57 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AYJ52_11120 1de0b21b1ce2550435e96c2fc4e79ed0 439 PIRSF PIRSF005353 1 438 1.5E-185 T 11-10-2018 IPR026033 Purine permease PbuG-like AYJ52_02440 6506a5aebbdff57fd6b4f366065056b5 237 Pfam PF11306 Protein of unknown function (DUF3108) 24 232 1.1E-23 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 AYJ52_17905 219f72d65045f4d3106cca8d2629ad9a 228 PIRSF PIRSF006232 1 225 2.0E-45 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AYJ52_17905 219f72d65045f4d3106cca8d2629ad9a 228 Gene3D G3DSA:2.60.120.10 9 228 1.0E-76 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_17905 219f72d65045f4d3106cca8d2629ad9a 228 SUPERFAMILY SSF51182 4 227 1.89E-61 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AYJ52_17905 219f72d65045f4d3106cca8d2629ad9a 228 Gene3D G3DSA:2.60.120.10 12 135 1.0E-76 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AYJ52_17905 219f72d65045f4d3106cca8d2629ad9a 228 Pfam PF02678 Pirin 13 119 1.6E-30 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AYJ52_13505 dc910050feeb4e2e9c35448ad1539e7d 373 SUPERFAMILY SSF52096 12 340 1.84E-52 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_13505 dc910050feeb4e2e9c35448ad1539e7d 373 Gene3D G3DSA:3.90.226.10 12 347 1.5E-90 T 11-10-2018 AYJ52_13505 dc910050feeb4e2e9c35448ad1539e7d 373 Pfam PF16113 Enoyl-CoA hydratase/isomerase 23 340 1.0E-85 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AYJ52_08245 040bb421649d3d3c884da5bbe5f8a9f0 341 Gene3D G3DSA:1.10.287.110 269 337 1.5E-9 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AYJ52_08245 040bb421649d3d3c884da5bbe5f8a9f0 341 SUPERFAMILY SSF46565 270 335 7.33E-9 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AYJ52_09955 f019a72936970547b202168fe63479e8 142 Pfam PF05488 PAAR motif 48 117 8.3E-11 T 11-10-2018 IPR008727 PAAR motif AYJ52_09955 f019a72936970547b202168fe63479e8 142 Gene3D G3DSA:2.60.200.60 44 125 1.1E-6 T 11-10-2018 AYJ52_17005 52dc3def8d3734a861abb1f880048ea3 566 Pfam PF02470 MlaD protein 320 417 2.9E-16 T 11-10-2018 IPR003399 Mce/MlaD AYJ52_17005 52dc3def8d3734a861abb1f880048ea3 566 Pfam PF02470 MlaD protein 77 167 6.8E-11 T 11-10-2018 IPR003399 Mce/MlaD AYJ52_17005 52dc3def8d3734a861abb1f880048ea3 566 Pfam PF02470 MlaD protein 192 252 4.5E-8 T 11-10-2018 IPR003399 Mce/MlaD AYJ52_19040 3c61a263a3723bfeb00c59b4a64a1ea0 156 Gene3D G3DSA:3.55.50.60 43 156 2.4E-10 T 11-10-2018 IPR038140 DotD superfamily AYJ52_19040 3c61a263a3723bfeb00c59b4a64a1ea0 156 Pfam PF16816 DotD protein 48 155 2.6E-11 T 11-10-2018 IPR031817 DotD protein AYJ52_18635 7d4546867469fede342d029bc770452b 150 Pfam PF13279 Thioesterase-like superfamily 11 128 1.3E-9 T 11-10-2018 AYJ52_18635 7d4546867469fede342d029bc770452b 150 SUPERFAMILY SSF54637 3 134 6.91E-40 T 11-10-2018 IPR029069 HotDog domain superfamily AYJ52_18635 7d4546867469fede342d029bc770452b 150 Gene3D G3DSA:3.10.129.10 2 139 1.4E-33 T 11-10-2018 AYJ52_09460 4e939dd61ae38d3d1f903c76cc586d52 186 Pfam PF02620 Uncharacterized ACR, COG1399 64 181 1.6E-17 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AYJ52_15810 d3762cb0eea13c60941c77369bf8104a 94 Gene3D G3DSA:3.40.1260.10 3 93 1.3E-5 T 11-10-2018 IPR027396 DsrEFH-like AYJ52_15810 d3762cb0eea13c60941c77369bf8104a 94 SUPERFAMILY SSF75169 5 91 5.05E-6 T 11-10-2018 IPR027396 DsrEFH-like AYJ52_16645 741118ed3f5df33af9d11874768d90c3 139 Pfam PF05433 Glycine zipper 2TM domain 78 118 1.8E-5 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AYJ52_10020 7c99956a3894f23f9287386317a41b3e 146 Pfam PF04304 Protein of unknown function (DUF454) 33 144 4.7E-34 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AYJ52_10020 7c99956a3894f23f9287386317a41b3e 146 PIRSF PIRSF016789 32 146 1.4E-28 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AYJ52_16930 897fd457b4cc1822e85f3d17a4318cea 164 Pfam PF16036 Chalcone isomerase-like 57 163 3.7E-10 T 11-10-2018 IPR016087 Chalcone isomerase GO:0016872 AYJ52_12560 e3ebe2fa3d1e383141b6c79381605c9d 538 Gene3D G3DSA:1.10.4160.10 17 476 6.3E-15 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily AYJ52_18810 7ffa91454ce97a62706f33c296ffcbb0 150 Gene3D G3DSA:3.30.420.270 65 144 1.3E-12 T 11-10-2018 AYJ52_18810 7ffa91454ce97a62706f33c296ffcbb0 150 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 148 8.6E-29 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AYJ52_18810 7ffa91454ce97a62706f33c296ffcbb0 150 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 10 147 27.259 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AYJ52_18810 7ffa91454ce97a62706f33c296ffcbb0 150 TIGRFAM TIGR02801 tolR: protein TolR 17 147 3.4E-44 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AYJ52_08115 c7c90fae634f721bbb75399f41306165 226 SUPERFAMILY SSF52540 12 199 3.31E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_08115 c7c90fae634f721bbb75399f41306165 226 Gene3D G3DSA:3.40.50.300 3 215 2.5E-15 T 11-10-2018 AYJ52_08155 9bb8ed72cd3a9ed510280f76750276b5 477 Pfam PF03235 Protein of unknown function DUF262 22 202 8.5E-29 T 11-10-2018 IPR004919 Domain of unknown function DUF262 AYJ52_06220 e3c2d7d4a3e43d694f8b2292d8ee380f 562 SUPERFAMILY SSF48452 367 527 5.31E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_06220 e3c2d7d4a3e43d694f8b2292d8ee380f 562 SUPERFAMILY SSF48452 6 116 4.93E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_04330 3b78a0372b1a327335573260277b1c26 179 SUPERFAMILY SSF48452 3 175 1.29E-67 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_04330 3b78a0372b1a327335573260277b1c26 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 175 4.5E-64 T 11-10-2018 IPR010323 Protein of unknown function DUF924 AYJ52_04330 3b78a0372b1a327335573260277b1c26 179 Gene3D G3DSA:1.25.40.10 79 179 4.8E-33 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AYJ52_04330 3b78a0372b1a327335573260277b1c26 179 Gene3D G3DSA:1.20.58.320 1 78 1.7E-27 T 11-10-2018 AYJ52_15595 f449cddcaae67ba97fcf271630dd588e 468 PIRSF PIRSF006060 5 465 4.4E-68 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AYJ52_15595 f449cddcaae67ba97fcf271630dd588e 468 Gene3D G3DSA:1.20.1740.10 14 466 7.5E-61 T 11-10-2018 AYJ52_15595 f449cddcaae67ba97fcf271630dd588e 468 Pfam PF00324 Amino acid permease 24 433 6.6E-92 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AYJ52_15595 f449cddcaae67ba97fcf271630dd588e 468 ProSitePatterns PS00218 Amino acid permeases signature. 47 77 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AYJ52_17220 76f897bd807d37d348e375eebf1b4c11 151 Gene3D G3DSA:3.40.50.1240 1 146 1.6E-30 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AYJ52_17220 76f897bd807d37d348e375eebf1b4c11 151 SMART SM00855 2 111 1.7E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AYJ52_17220 76f897bd807d37d348e375eebf1b4c11 151 SUPERFAMILY SSF53254 1 121 4.16E-21 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AYJ52_17220 76f897bd807d37d348e375eebf1b4c11 151 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 76 1.2E-13 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AYJ52_17935 76510c4c4f83c75594114433e53abb21 486 Pfam PF13372 Alginate export 92 480 4.6E-120 T 11-10-2018 IPR025388 Alginate export domain AYJ52_02210 1e245633eaf4b47ba9746da2a9bbf190 224 Pfam PF04172 LrgB-like family 11 218 3.4E-50 T 11-10-2018 IPR007300 CidB/LrgB family AYJ52_07160 c512bcd6f61b98d03148029286b9350e 110 Gene3D G3DSA:3.20.160.10 1 110 2.3E-45 T 11-10-2018 IPR038604 Type III effector HopJ superfamily AYJ52_07160 c512bcd6f61b98d03148029286b9350e 110 Pfam PF08888 HopJ type III effector protein 3 107 1.3E-42 T 11-10-2018 IPR014984 HopJ type III effector protein AYJ52_09345 6c5e3d528caa5a212eb510e0f4a3ba91 269 Pfam PF01578 Cytochrome C assembly protein 7 266 3.3E-23 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AYJ52_01435 05be9e11b9731efe8c4f592bb5dddf26 46 Pfam PF08085 Entericidin EcnA/B family 19 39 6.0E-10 T 11-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AYJ52_16010 8578b79b692bb48fec78f7277c2fe02d 374 Pfam PF02698 DUF218 domain 210 357 3.3E-21 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AYJ52_09770 a49553ad164532da8ae46b83da2e94c6 270 Pfam PF13614 AAA domain 3 166 7.6E-22 T 11-10-2018 IPR025669 AAA domain AYJ52_09770 a49553ad164532da8ae46b83da2e94c6 270 Gene3D G3DSA:3.40.50.300 1 259 3.3E-71 T 11-10-2018 AYJ52_09770 a49553ad164532da8ae46b83da2e94c6 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 2.1E-105 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AYJ52_09770 a49553ad164532da8ae46b83da2e94c6 270 PIRSF PIRSF003092 1 270 2.1E-87 T 11-10-2018 IPR025501 ATP binding protein MinD AYJ52_09770 a49553ad164532da8ae46b83da2e94c6 270 SUPERFAMILY SSF52540 2 267 9.36E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ52_13655 31d68cd33b1182606aa2dee709b42e33 221 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 83 1.5E-7 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AYJ52_13655 31d68cd33b1182606aa2dee709b42e33 221 Gene3D G3DSA:3.40.50.720 1 220 9.9E-49 T 11-10-2018 AYJ52_13655 31d68cd33b1182606aa2dee709b42e33 221 SUPERFAMILY SSF51735 2 207 7.15E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AYJ52_14980 4b536fb2335868a97fb804f92b1db350 264 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 27 264 4.0E-38 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AYJ52_14980 4b536fb2335868a97fb804f92b1db350 264 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 9 264 1.0E-38 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AYJ52_18755 7f9c592aac979fa21efb552697ca6328 105 Gene3D G3DSA:3.30.70.120 1 104 3.6E-41 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AYJ52_18755 7f9c592aac979fa21efb552697ca6328 105 SUPERFAMILY SSF102705 2 100 1.77E-23 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AYJ52_09295 c83dad69eb5c3be59c098dd9edb21051 168 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 4 156 7.0E-31 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 AYJ52_11000 2a79806bdbadc390e67a9ac32fc126a1 277 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 264 3.0E-55 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AYJ52_11000 2a79806bdbadc390e67a9ac32fc126a1 277 Gene3D G3DSA:3.90.226.10 1 210 6.3E-76 T 11-10-2018 AYJ52_11000 2a79806bdbadc390e67a9ac32fc126a1 277 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 109 129 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AYJ52_11000 2a79806bdbadc390e67a9ac32fc126a1 277 SUPERFAMILY SSF52096 6 263 2.21E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AYJ52_03880 308db1b92e6a0b52dd0305bf06ab9514 231 Pfam PF03591 AzlC protein 30 165 4.2E-29 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease AYJ52_01845 4e1bdc3452e3eecf9d7abed1dfb00052 177 Pfam PF03724 META domain 68 173 5.4E-15 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AYJ52_01845 4e1bdc3452e3eecf9d7abed1dfb00052 177 Gene3D G3DSA:2.40.128.270 65 177 5.9E-10 T 11-10-2018 IPR038670 HslJ-like superfamily AYJ52_11295 f84bc0977a7e32f982ca46e13d6980fe 72 Gene3D G3DSA:2.30.30.320 1 72 1.9E-28 T 11-10-2018 IPR037135 DUF1653-like domain superfamily AYJ52_11295 f84bc0977a7e32f982ca46e13d6980fe 72 Pfam PF07866 Protein of unknown function (DUF1653) 6 67 1.1E-27 T 11-10-2018 IPR023387 DUF1653-like domain AYJ52_16905 b2368110ce3b45efb5ed4ed00ad77e64 350 Pfam PF05853 beta-keto acid cleavage enzyme 15 318 3.3E-62 T 11-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 AYJ52_16905 b2368110ce3b45efb5ed4ed00ad77e64 350 Gene3D G3DSA:3.20.20.70 11 324 3.2E-67 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AYJ52_05640 cab9111a3f4dd653b58623b2db31ed03 138 Gene3D G3DSA:3.10.450.610 2 137 6.9E-32 T 11-10-2018 AYJ52_05640 cab9111a3f4dd653b58623b2db31ed03 138 Pfam PF16245 Domain of unknown function (DUF4902) 11 121 2.4E-23 T 11-10-2018 IPR032598 Protein of unknown function DUF4902 AYJ52_19080 85c0eec39ede62011e110a46faaa3433 232 Pfam PF11393 Type-IV b secretion system, inner-membrane complex component 53 228 4.5E-23 T 11-10-2018 IPR021055 Type-IV b secretion system, inner-membrane complex component AYJ52_14775 c9403f26e56327212f92fb8d1273a85b 152 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 139 1.3E-34 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ AYJ52_11535 886d8772043ed94a788fc8836195f804 311 Pfam PF10118 Predicted metal-dependent hydrolase 9 282 1.5E-61 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_11535 886d8772043ed94a788fc8836195f804 311 PIRSF PIRSF007580 2 301 2.2E-77 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_01805 0bd40436ab1224032c7afb44d7b6d6b8 291 SUPERFAMILY SSF47240 5 195 1.22E-7 T 11-10-2018 IPR009078 Ferritin-like superfamily AYJ52_01805 0bd40436ab1224032c7afb44d7b6d6b8 291 PIRSF PIRSF007580 2 278 4.6E-66 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_01805 0bd40436ab1224032c7afb44d7b6d6b8 291 Pfam PF10118 Predicted metal-dependent hydrolase 15 260 7.9E-74 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AYJ52_00270 c5cb345058435ac9c6f50f532d1dad7a 376 Pfam PF04087 Domain of unknown function (DUF389) 86 221 1.3E-28 T 11-10-2018 IPR005240 Protein of unknown function DUF389 AYJ52_14950 0fc637df630262fdef8d2f3034df251b 298 SUPERFAMILY SSF160104 67 197 1.05E-8 T 11-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 AYJ52_14950 0fc637df630262fdef8d2f3034df251b 298 Gene3D G3DSA:2.40.400.10 57 251 1.3E-8 T 11-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 AYJ52_06000 4b2f89f2aa28b56d9c2ad71da7e5d8e1 419 Pfam PF13449 Esterase-like activity of phytase 74 393 2.0E-56 T 11-10-2018 IPR027372 Phytase-like domain AYJ52_12890 1e0cf8bd9d0d0a82f91dad2ccb6fe4af 668 Gene3D G3DSA:3.40.50.1820 375 639 1.3E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_12890 1e0cf8bd9d0d0a82f91dad2ccb6fe4af 668 SUPERFAMILY SSF53474 377 646 1.39E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_15330 3d8678990991ad2ccf2b67f35459ea4e 120 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 12 116 21.802 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AYJ52_15330 3d8678990991ad2ccf2b67f35459ea4e 120 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 15 115 4.8E-34 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AYJ52_10225 242f8ed08c84d4acf86f803c34195673 398 SUPERFAMILY SSF56935 38 369 9.61E-11 T 11-10-2018 AYJ52_07760 f142dc50117c9ad302983f6733a332ae 204 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 17 176 5.8E-43 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AYJ52_05820 cdaa0d6d025068b47055d185d7bc4012 132 Pfam PF03899 ATP synthase I chain 16 112 9.3E-20 T 11-10-2018 IPR005598 ATP synthase protein I AYJ52_05720 a65f43f5e14ae92811f555349eb00876 196 Pfam PF01810 LysE type translocator 13 175 2.4E-7 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_03075 40796a229b76fde384994a76ba6c01b0 256 Pfam PF01925 Sulfite exporter TauE/SafE 10 247 1.9E-37 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AYJ52_00495 cb82fdb506f7251e6e4d51132c186811 315 Pfam PF03389 MobA/MobL family 35 165 7.2E-10 T 11-10-2018 IPR005053 MobA/MobL protein AYJ52_00495 cb82fdb506f7251e6e4d51132c186811 315 Gene3D G3DSA:3.30.930.30 5 208 1.6E-33 T 11-10-2018 AYJ52_17560 d83b6fc1e876594b2b4711ccdee2f592 105 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 3 98 3.0E-20 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AYJ52_11605 3707345403e89a3f80177a598dc57e42 59 Pfam PF09374 Predicted Peptidoglycan domain 21 59 6.3E-6 T 11-10-2018 IPR018537 Peptidoglycan binding domain AYJ52_12035 322eab66771be745cb7cd1cfefa7e853 332 Pfam PF06996 Type VI secretion, TssG 20 311 1.2E-65 T 11-10-2018 IPR010732 Type VI secretion, TssG-like AYJ52_12035 322eab66771be745cb7cd1cfefa7e853 332 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 311 1.1E-61 T 11-10-2018 IPR010732 Type VI secretion, TssG-like AYJ52_04015 586c50892c1a7c15491950fec22295e3 191 Pfam PF05656 Protein of unknown function (DUF805) 20 139 1.0E-20 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AYJ52_15140 d5c419a7cc12a8c4c7a026c33bf00765 137 Pfam PF04143 Sulphur transport 33 131 4.7E-7 T 11-10-2018 IPR007272 Sulphur transport domain AYJ52_13280 b5f4480c901cf18f0e9d7bc163952546 248 Pfam PF09992 Phosphodiester glycosidase 74 221 1.1E-19 T 11-10-2018 IPR018711 Phosphodiester glycosidase AYJ52_02165 9aae4c46bacfbf0a5f460de65221156d 167 Pfam PF13689 Domain of unknown function (DUF4154) 34 164 1.5E-23 T 11-10-2018 IPR025293 YfiR-like AYJ52_12610 652a9dc48f7bb700eeae45e23a3e77ce 212 Pfam PF01810 LysE type translocator 19 207 7.9E-33 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_12610 652a9dc48f7bb700eeae45e23a3e77ce 212 PIRSF PIRSF006324 5 209 2.2E-46 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_16040 dece7d4efdf66486b9c506fb7fe0089b 103 Pfam PF05666 Fels-1 Prophage Protein-like 52 100 4.3E-10 T 11-10-2018 IPR008617 Uncharacterised protein family, YcgJ AYJ52_16040 dece7d4efdf66486b9c506fb7fe0089b 103 Pfam PF05666 Fels-1 Prophage Protein-like 8 44 1.8E-14 T 11-10-2018 IPR008617 Uncharacterised protein family, YcgJ AYJ52_03515 744a0cade3c627a190b4a6fa6469ae79 182 Pfam PF05656 Protein of unknown function (DUF805) 16 128 3.9E-23 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AYJ52_08170 9343318d910d0a884f3b73031ccb2559 280 Gene3D G3DSA:3.30.565.40 50 163 5.6E-9 T 11-10-2018 AYJ52_17405 e170a1cb829f774063c7a5107dcc5edf 119 Pfam PF04076 Bacterial OB fold (BOF) protein 31 118 1.3E-23 T 11-10-2018 IPR005220 Bacterial OB-fold AYJ52_17405 e170a1cb829f774063c7a5107dcc5edf 119 Gene3D G3DSA:2.40.50.200 15 119 4.9E-28 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AYJ52_17405 e170a1cb829f774063c7a5107dcc5edf 119 SUPERFAMILY SSF101756 31 118 1.26E-25 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AYJ52_03885 09451b9e81f23e3e88170b7984f1fb90 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 102 2.9E-12 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AYJ52_13830 df2e9dd48ad4019e598b0843892654c1 295 Pfam PF01925 Sulfite exporter TauE/SafE 7 264 3.7E-49 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AYJ52_11540 90725bd79242c0608d705d945f66e025 77 Pfam PF09939 Uncharacterized protein conserved in bacteria (DUF2171) 9 70 1.0E-23 T 11-10-2018 IPR018684 Protein of unknown function DUF2171 AYJ52_05435 b6048be7e805321fe39230138dc9050b 165 Gene3D G3DSA:3.40.630.30 8 148 4.0E-19 T 11-10-2018 AYJ52_05435 b6048be7e805321fe39230138dc9050b 165 SUPERFAMILY SSF55729 4 150 8.98E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AYJ52_05435 b6048be7e805321fe39230138dc9050b 165 Pfam PF00583 Acetyltransferase (GNAT) family 62 143 1.0E-7 T 11-10-2018 IPR000182 GNAT domain AYJ52_13275 9acbf19cc5c4c00426d828cee0fee662 196 Pfam PF04970 Lecithin retinol acyltransferase 9 107 1.3E-15 T 11-10-2018 IPR007053 LRAT-like domain AYJ52_16155 bfb753b00b626d80fab1e15963232a7a 142 Gene3D G3DSA:2.60.120.380 17 136 2.0E-27 T 11-10-2018 AYJ52_17795 a021e3ff678cdbc503bd1025f6766e5f 156 Pfam PF11220 Protein of unknown function (DUF3015) 19 155 6.6E-40 T 11-10-2018 IPR021383 Protein of unknown function DUF3015 AYJ52_07545 034bdcd2c04e7470a437d2af64168878 730 SUPERFAMILY SSF101898 433 675 3.66E-6 T 11-10-2018 AYJ52_07545 034bdcd2c04e7470a437d2af64168878 730 Pfam PF05787 Bacterial protein of unknown function (DUF839) 83 686 3.9E-141 T 11-10-2018 IPR008557 Protein of unknown function DUF839 AYJ52_17565 a4175c05ed50bb24df062a844334bae9 238 Pfam PF03591 AzlC protein 29 165 2.8E-31 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease AYJ52_01310 0d0d7632b0a0371705efeba26399719f 355 Pfam PF06674 Protein of unknown function (DUF1176) 26 348 1.7E-95 T 11-10-2018 IPR009560 Protein of unknown function DUF1176 AYJ52_19645 2bdb5da9bffd7e2d813bd509fa9fad7e 74 Gene3D G3DSA:1.10.260.40 1 69 4.1E-5 T 11-10-2018 AYJ52_08990 50c8a067b9b83e8db1484d1e05bd6358 202 Pfam PF01810 LysE type translocator 14 198 1.3E-25 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_17070 bab110b79f62a83adeed075da447a584 178 Pfam PF05229 Spore Coat Protein U domain 26 175 8.7E-23 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_17070 bab110b79f62a83adeed075da447a584 178 SMART SM00972 117 175 4.6E-14 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_19720 93ff6ff3d3354f559819c9085f4f48c6 201 Pfam PF01810 LysE type translocator 14 190 4.6E-17 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AYJ52_18350 e7a0923426b5ad1494601f730a29eac9 125 Pfam PF06127 Protein of unknown function (DUF962) 20 112 3.0E-30 T 11-10-2018 IPR009305 Protein of unknown function DUF962 AYJ52_06935 dd1af85629271620cff70c96015c8a02 122 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 107 2.4E-25 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AYJ52_00035 67bfbef41567743db531dab596fcb886 766 SUPERFAMILY SSF51126 29 359 4.19E-10 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AYJ52_05440 e4689d52db35622ddd4bae2d15077e7a 157 Gene3D G3DSA:1.20.1480.40 19 157 2.2E-62 T 11-10-2018 AYJ52_05440 e4689d52db35622ddd4bae2d15077e7a 157 Pfam PF16133 Domain of unknown function (DUF4844) 34 145 1.3E-20 T 11-10-2018 IPR032301 Protein of unknown function DUF4844 AYJ52_08915 45d5ccdc85820b8f9ccb9ac19fa21b6c 177 Pfam PF04982 HPP family 46 166 2.0E-39 T 11-10-2018 IPR007065 HPP AYJ52_17575 0915e341487078d11463e3ff77f358eb 161 Pfam PF11948 Protein of unknown function (DUF3465) 47 161 7.8E-52 T 11-10-2018 IPR021856 Protein of unknown function DUF3465 AYJ52_01430 1d2e8a306e9576829af92c096477df03 293 Pfam PF08907 Domain of unknown function (DUF1853) 23 257 2.2E-44 T 11-10-2018 IPR015003 Protein of unknown function DUF1853 AYJ52_07630 27be29ea142c374032278b35b5e67efa 184 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 104 156 5.0E-9 T 11-10-2018 IPR018637 Domain of unknown function DUF2059 AYJ52_01215 73748805357ed3506cba9746afc787a8 330 Pfam PF00487 Fatty acid desaturase 57 305 6.2E-35 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AYJ52_11880 a1ccec28744eae7f6e66f48ae1372547 232 Pfam PF08856 Protein of unknown function (DUF1826) 25 230 1.7E-6 T 11-10-2018 IPR014955 Protein of unknown function DUF1826 AYJ52_07190 eaf421e5363773062717cc2f58967b3e 153 Pfam PF04657 Putative inner membrane exporter, YdcZ 12 149 3.0E-44 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ AYJ52_17065 e01991d3eef5dd5e1ce98de09220092e 182 Pfam PF05229 Spore Coat Protein U domain 28 179 1.8E-10 T 11-10-2018 IPR007893 Spore coat protein U AYJ52_03900 5717109dbd0d0937aba0a793127a29b1 360 Pfam PF04332 Protein of unknown function (DUF475) 53 355 1.4E-114 T 11-10-2018 IPR007427 Protein of unknown function DUF475 AYJ52_00060 7624b8f24cf126f184ee9b8ee54e3a9c 397 Pfam PF01594 AI-2E family transporter 11 343 9.5E-59 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AYJ52_18035 69cb0d0c65cb464e2fb94e3f9c85d1aa 675 SUPERFAMILY SSF55874 18 175 3.01E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ52_13735 c0d59c1de072893ecfa4c46a588dba97 151 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 23 137 4.5E-31 T 11-10-2018 IPR008769 Poly granule associated AYJ52_06070 0fbde180af71bc3b88cfecc3471fb490 214 Pfam PF03458 UPF0126 domain 91 164 2.8E-20 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AYJ52_06070 0fbde180af71bc3b88cfecc3471fb490 214 Pfam PF03458 UPF0126 domain 5 79 4.8E-20 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AYJ52_01315 e2ffd409ebdb8a20cf17ec45bea01ef9 249 Pfam PF16142 Domain of unknown function (DUF4850) 58 243 7.6E-70 T 11-10-2018 IPR032322 Protein of unknown function DUF4850 AYJ52_04890 97805ae13ba6117e74cfb6dcbde8cacc 308 SUPERFAMILY SSF82171 39 248 9.42E-13 T 11-10-2018 AYJ52_04890 97805ae13ba6117e74cfb6dcbde8cacc 308 Gene3D G3DSA:2.120.10.30 170 289 1.0E-5 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AYJ52_04890 97805ae13ba6117e74cfb6dcbde8cacc 308 Gene3D G3DSA:2.120.10.30 31 168 5.5E-9 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AYJ52_00710 b0ae5390c2ed59f5aa493046db138436 299 Pfam PF04228 Putative neutral zinc metallopeptidase 1 295 6.3E-112 T 11-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AYJ52_05675 18f950406afe62bc874a57a84ead3cfb 424 SUPERFAMILY SSF56935 37 424 5.49E-14 T 11-10-2018 AYJ52_02320 21f0c21acc6c38f0a92ea82eea5cee63 601 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 14 354 1.0E-123 T 11-10-2018 IPR010839 Acyclic terpene utilisation AYJ52_10325 03639e00f1fe5063b5462330f7e3ac6f 205 Gene3D G3DSA:1.20.1540.10 3 193 4.9E-27 T 11-10-2018 IPR035952 Rhomboid-like superfamily AYJ52_10325 03639e00f1fe5063b5462330f7e3ac6f 205 SUPERFAMILY SSF144091 7 191 6.67E-35 T 11-10-2018 AYJ52_10325 03639e00f1fe5063b5462330f7e3ac6f 205 Pfam PF01694 Rhomboid family 41 189 9.4E-25 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AYJ52_04785 e62ced9fd4436f5c073be5e62d57dde1 243 Pfam PF01925 Sulfite exporter TauE/SafE 8 240 7.0E-29 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AYJ52_10670 c309de09c4aa60e8d6aeb91848364c9a 235 Pfam PF04972 BON domain 60 113 2.2E-10 T 11-10-2018 IPR007055 BON domain AYJ52_08225 8a311ecf3e83f351f72a9de1f2d51cce 411 Pfam PF11726 Inovirus Gp2 202 360 4.8E-10 T 11-10-2018 AYJ52_13860 8c70ba9f1f7ae60d1424b7ae0ea0edb7 289 Pfam PF10977 Protein of unknown function (DUF2797) 47 285 1.1E-90 T 11-10-2018 IPR021246 Protein of unknown function DUF2797 AYJ52_02055 bff2f1cfd10e1f2eb8bb4934238e30e8 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 281 8.4E-62 T 11-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 AYJ52_19110 d05edd99e3a303c859b8d8b4484164cf 255 SMART SM00507 24 74 0.0032 T 11-10-2018 IPR003615 HNH nuclease AYJ52_18900 107713679046a83fbda41bc32df0fa39 378 Pfam PF13020 Domain of unknown function (DUF3883) 256 352 7.4E-21 T 11-10-2018 IPR024975 Domain of unknown function DUF3883 AYJ52_00980 adb74459631c49e103165b00309a9b38 338 SUPERFAMILY SSF46565 187 227 5.63E-5 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AYJ52_07355 f07cc9dba06ac076a51c8f05b3595dc9 420 Gene3D G3DSA:1.20.58.2200 357 419 4.7E-6 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily AYJ52_02525 ce10f05183a89417204755eb258ac8b9 736 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 308 726 6.6E-19 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AYJ52_12660 a900546afe8aad63f36a5fbce6ff8156 143 Pfam PF03788 LrgA family 29 121 6.5E-22 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 AYJ52_05735 c6cee0e01a951d6b8c9d0adb13818cc7 409 Pfam PF04286 Protein of unknown function (DUF445) 223 339 2.9E-9 T 11-10-2018 IPR007383 Protein of unknown function DUF445 AYJ52_00405 d5849a0b96273a6f5a3bf1c9efa918a5 237 Pfam PF13795 HupE / UreJ protein 54 205 6.6E-52 T 11-10-2018 IPR032809 Putative HupE/UreJ protein AYJ52_01655 859fc958e1e32a7259cacfa1c25c3228 401 Gene3D G3DSA:3.90.1860.10 3 401 8.4E-118 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AYJ52_01655 859fc958e1e32a7259cacfa1c25c3228 401 SUPERFAMILY SSF103365 14 401 8.63E-133 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AYJ52_01655 859fc958e1e32a7259cacfa1c25c3228 401 Pfam PF01139 tRNA-splicing ligase RtcB 31 401 7.4E-133 T 11-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AYJ52_19085 611b7f7caea0c4a602eb12ea55f8ffc4 367 Pfam PF12293 Putative outer membrane core complex of type IVb secretion 111 347 3.2E-47 T 11-10-2018 IPR022073 Putative outer membrane core complex of type IVb secretion AYJ52_00365 f80cb37a3d330bdd315f970800356e66 71 Gene3D G3DSA:3.40.50.300 7 64 3.5E-7 T 11-10-2018 AYJ52_11365 bffe8f6cb5498046c84900200e879b2c 293 Pfam PF13557 Putative MetA-pathway of phenol degradation 64 289 6.8E-61 T 11-10-2018 IPR025737 MetA-pathway of phenol degradation, putative AYJ52_12005 d8c5b6f9f0c715cd63b25feb0f23eae9 133 SUPERFAMILY SSF54427 10 129 3.15E-25 T 11-10-2018 IPR032710 NTF2-like domain superfamily AYJ52_12005 d8c5b6f9f0c715cd63b25feb0f23eae9 133 Gene3D G3DSA:3.10.450.50 5 129 6.1E-35 T 11-10-2018 AYJ52_18115 5d32ee27d25daa9a110563ffe00cdd0c 100 Pfam PF04328 Selenoprotein, putative 36 100 8.7E-23 T 11-10-2018 IPR007423 Selenoprotein, putative AYJ52_14790 a766915cbfaefca815ff40402d2c7a65 154 Pfam PF07681 DoxX 20 102 2.7E-14 T 11-10-2018 IPR032808 DoxX family AYJ52_03950 12e3b601fe28b883b00f3cb8d404ed32 300 Pfam PF16956 Putative general bacterial porin 2 298 2.9E-18 T 11-10-2018 IPR031593 Putative general bacterial porin AYJ52_04625 e69e342095f31d980ff4eebdee49b89b 214 Gene3D G3DSA:3.40.50.850 5 213 4.3E-81 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_04625 e69e342095f31d980ff4eebdee49b89b 214 Pfam PF00857 Isochorismatase family 11 207 2.8E-33 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AYJ52_04625 e69e342095f31d980ff4eebdee49b89b 214 SUPERFAMILY SSF52499 6 212 1.31E-52 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AYJ52_16865 f3ead87cb9e2c94b160492619d2004d8 139 Pfam PF06713 Bacterial PH domain 59 133 2.5E-23 T 11-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 AYJ52_05495 82c4a1bc424ede4cbf5f80125a2b4e2b 297 Pfam PF05655 Pseudomonas avirulence D protein (AvrD) 5 145 2.0E-17 T 11-10-2018 IPR008799 Pseudomonas avirulence D AYJ52_05495 82c4a1bc424ede4cbf5f80125a2b4e2b 297 Pfam PF05655 Pseudomonas avirulence D protein (AvrD) 207 294 6.0E-22 T 11-10-2018 IPR008799 Pseudomonas avirulence D AYJ52_02980 c9380375d0e00be91f8eb89076aa3d0b 425 SUPERFAMILY SSF53474 51 180 3.95E-5 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AYJ52_00780 c5a054e2540a522fa070b1b41e2d231a 161 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 6.1E-15 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 AYJ52_14130 9cd5b4c996401fd661bee6db4f141e5e 469 Pfam PF02667 Short chain fatty acid transporter 9 455 1.1E-87 T 11-10-2018 IPR006160 Short chain fatty acid transporter AtoE AYJ52_03190 703095b08066da874cd41036212a2ba9 437 Pfam PF04932 O-Antigen ligase 182 311 1.8E-11 T 11-10-2018 IPR007016 O-antigen ligase-related AYJ52_04205 266bae8cc127870bc565e8c87811fd24 255 Pfam PF13557 Putative MetA-pathway of phenol degradation 27 254 2.1E-18 T 11-10-2018 IPR025737 MetA-pathway of phenol degradation, putative AYJ52_16480 ae7cf804f0c85e2d1c7655829bb2712a 265 Pfam PF10670 Domain of unknown function (DUF4198) 17 241 1.8E-20 T 11-10-2018 IPR019613 Protein of unknown function DUF4198 AYJ52_16765 edb4b999108709fba95a5e69d59037a9 198 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 7 141 2.2E-7 T 11-10-2018 IPR007296 Domain of unknown function DUF403 AYJ52_12385 c79a76e9a389cd2c32eb760ded5fd68d 438 SUPERFAMILY SSF56935 86 437 2.69E-21 T 11-10-2018 AYJ52_03925 557ac25d0431541f9d47151a14b9bc15 117 Pfam PF06993 Protein of unknown function (DUF1304) 8 114 1.6E-41 T 11-10-2018 IPR009732 Protein of unknown function DUF1304 AYJ52_00030 f71358cd75266496d6a7e5f358e86109 129 Pfam PF11304 Protein of unknown function (DUF3106) 39 89 1.1E-7 T 11-10-2018 IPR021455 Protein of unknown function DUF3106 AYJ52_17555 7181e49db4346e9350c34266a94adbe2 149 Pfam PF06127 Protein of unknown function (DUF962) 1 135 9.8E-22 T 11-10-2018 IPR009305 Protein of unknown function DUF962