locus-tag class description HRJ47_00005 PF00308 Bacterial dnaA protein HRJ47_00005 PF08299 Bacterial dnaA protein helix-turn-helix HRJ47_00005 PF11638 DnaA N-terminal domain HRJ47_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HRJ47_00010 PF02767 DNA polymerase III beta subunit, central domain HRJ47_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HRJ47_00015 PF02463 RecF/RecN/SMC N terminal domain HRJ47_00020 PF18053 DNA gyrase B subunit insert domain HRJ47_00020 PF01751 Toprim domain HRJ47_00020 PF00204 DNA gyrase B HRJ47_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HRJ47_00030 PF09335 SNARE associated Golgi protein HRJ47_00035 PF00005 ABC transporter HRJ47_00035 PF12848 ABC transporter HRJ47_00055 PF01521 Iron-sulphur cluster biosynthesis HRJ47_00060 PF00561 alpha/beta hydrolase fold HRJ47_00065 PF03702 Anhydro-N-acetylmuramic acid kinase HRJ47_00070 PF00579 tRNA synthetases class I (W and Y) HRJ47_00100 PF02798 Glutathione S-transferase, N-terminal domain HRJ47_00110 PF00209 Sodium:neurotransmitter symporter family HRJ47_00120 PF01029 NusB family HRJ47_00120 PF01189 16S rRNA methyltransferase RsmB/F HRJ47_00125 PF00551 Formyl transferase HRJ47_00125 PF02911 Formyl transferase, C-terminal domain HRJ47_00130 PF00920 Dehydratase family HRJ47_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_00145 PF03466 LysR substrate binding domain HRJ47_00150 PF00860 Permease family HRJ47_00155 PF00311 Phosphoenolpyruvate carboxylase HRJ47_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region HRJ47_00160 PF00440 Bacterial regulatory proteins, tetR family HRJ47_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRJ47_00170 PF00873 AcrB/AcrD/AcrF family HRJ47_00180 PF00226 DnaJ domain HRJ47_00180 PF01556 DnaJ C terminal domain HRJ47_00180 PF00684 DnaJ central domain HRJ47_00190 PF01113 Dihydrodipicolinate reductase, N-terminus HRJ47_00190 PF05173 Dihydrodipicolinate reductase, C-terminus HRJ47_00200 PF07690 Major Facilitator Superfamily HRJ47_00205 PF00248 Aldo/keto reductase family HRJ47_00210 PF03466 LysR substrate binding domain HRJ47_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_00225 PF00392 Bacterial regulatory proteins, gntR family HRJ47_00225 PF00155 Aminotransferase class I and II HRJ47_00230 PF08240 Alcohol dehydrogenase GroES-like domain HRJ47_00230 PF00107 Zinc-binding dehydrogenase HRJ47_00235 PF03352 Methyladenine glycosylase HRJ47_00250 PF10576 Iron-sulfur binding domain of endonuclease III HRJ47_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein HRJ47_00250 PF14815 NUDIX domain HRJ47_00250 PF00633 Helix-hairpin-helix motif HRJ47_00265 PF07043 Protein of unknown function (DUF1328) HRJ47_00270 PF03692 Putative zinc- or iron-chelating domain HRJ47_00275 PF07995 Glucose / Sorbosone dehydrogenase HRJ47_00280 PF12002 MgsA AAA+ ATPase C terminal HRJ47_00280 PF16193 AAA C-terminal domain HRJ47_00280 PF00004 ATPase family associated with various cellular activities (AAA) HRJ47_00285 PF01226 Formate/nitrite transporter HRJ47_00295 PF01259 SAICAR synthetase HRJ47_00305 PF00701 Dihydrodipicolinate synthetase family HRJ47_00310 PF00857 Isochorismatase family HRJ47_00315 PF01758 Sodium Bile acid symporter family HRJ47_00320 PF01554 MatE HRJ47_00325 PF04463 Protein of unknown function (DUF523) HRJ47_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRJ47_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRJ47_00345 PF14497 Glutathione S-transferase, C-terminal domain HRJ47_00345 PF02798 Glutathione S-transferase, N-terminal domain HRJ47_00355 PF00324 Amino acid permease HRJ47_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRJ47_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRJ47_00375 PF00392 Bacterial regulatory proteins, gntR family HRJ47_00375 PF07702 UTRA domain HRJ47_00380 PF05962 HutD HRJ47_00385 PF17391 Urocanase N-terminal domain HRJ47_00385 PF01175 Urocanase Rossmann-like domain HRJ47_00385 PF17392 Urocanase C-terminal domain HRJ47_00390 PF00221 Aromatic amino acid lyase HRJ47_00395 PF00324 Amino acid permease HRJ47_00400 PF01979 Amidohydrolase family HRJ47_00405 PF00491 Arginase family HRJ47_00415 PF13419 Haloacid dehalogenase-like hydrolase HRJ47_00420 PF01177 Asp/Glu/Hydantoin racemase HRJ47_00425 PF01810 LysE type translocator HRJ47_00435 PF01380 SIS domain HRJ47_00440 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_00440 PF12804 MobA-like NTP transferase domain HRJ47_00440 PF14602 Hexapeptide repeat of succinyl-transferase HRJ47_00445 PF04608 Phosphatidylglycerophosphatase A HRJ47_00450 PF02769 AIR synthase related protein, C-terminal domain HRJ47_00450 PF00586 AIR synthase related protein, N-terminal domain HRJ47_00455 PF01029 NusB family HRJ47_00460 PF00885 6,7-dimethyl-8-ribityllumazine synthase HRJ47_00465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HRJ47_00465 PF00925 GTP cyclohydrolase II HRJ47_00490 PF02580 D-Tyr-tRNA(Tyr) deacylase HRJ47_00495 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HRJ47_00495 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HRJ47_00500 PF00581 Rhodanese-like domain HRJ47_00505 PF02666 Phosphatidylserine decarboxylase HRJ47_00510 PF03069 Acetamidase/Formamidase family HRJ47_00525 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_00525 PF11808 Phosphate regulon sensor protein PhoR HRJ47_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_00525 PF00989 PAS fold HRJ47_00530 PF00072 Response regulator receiver domain HRJ47_00530 PF00486 Transcriptional regulatory protein, C terminal HRJ47_00540 PF00106 short chain dehydrogenase HRJ47_00545 PF01554 MatE HRJ47_00550 PF00155 Aminotransferase class I and II HRJ47_00555 PF04286 Protein of unknown function (DUF445) HRJ47_00570 PF04262 Glutamate-cysteine ligase HRJ47_00575 PF02600 Disulfide bond formation protein DsbB HRJ47_00580 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) HRJ47_00580 PF04717 Type VI secretion system, phage-baseplate injector HRJ47_00580 PF13296 Putative type VI secretion system Rhs element Vgr HRJ47_00620 PF05728 Uncharacterised protein family (UPF0227) HRJ47_00625 PF01751 Toprim domain HRJ47_00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_00625 PF00986 DNA gyrase B subunit, carboxyl terminus HRJ47_00625 PF00204 DNA gyrase B HRJ47_00630 PF04115 Ureidoglycolate lyase HRJ47_00635 PF03561 Allantoicase repeat HRJ47_00640 PF01494 FAD binding domain HRJ47_00650 PF00860 Permease family HRJ47_00655 PF00576 HIUase/Transthyretin family HRJ47_00685 PF02683 Cytochrome C biogenesis protein transmembrane region HRJ47_00685 PF11412 Disulphide bond corrector protein DsbC HRJ47_00690 PF07694 5TMR of 5TMR-LYT HRJ47_00690 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_00695 PF07859 alpha/beta hydrolase fold HRJ47_00705 PF03960 ArsC family HRJ47_00710 PF03372 Endonuclease/Exonuclease/phosphatase family HRJ47_00715 PF00156 Phosphoribosyl transferase domain HRJ47_00725 PF07715 TonB-dependent Receptor Plug Domain HRJ47_00725 PF00593 TonB dependent receptor HRJ47_00735 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HRJ47_00735 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HRJ47_00740 PF04101 Glycosyltransferase family 28 C-terminal domain HRJ47_00740 PF03033 Glycosyltransferase family 28 N-terminal domain HRJ47_00745 PF08245 Mur ligase middle domain HRJ47_00745 PF02875 Mur ligase family, glutamate ligase domain HRJ47_00745 PF01225 Mur ligase family, catalytic domain HRJ47_00750 PF01820 D-ala D-ala ligase N-terminus HRJ47_00750 PF07478 D-ala D-ala ligase C-terminus HRJ47_00755 PF08478 POTRA domain, FtsQ-type HRJ47_00755 PF03799 Cell division protein FtsQ HRJ47_00760 PF02491 SHS2 domain inserted in FTSA HRJ47_00765 PF12327 FtsZ family, C-terminal domain HRJ47_00765 PF00091 Tubulin/FtsZ family, GTPase domain HRJ47_00770 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HRJ47_00780 PF01551 Peptidase family M23 HRJ47_00785 PF17831 Pyruvate dehydrogenase E1 component middle domain HRJ47_00785 PF00456 Transketolase, thiamine diphosphate binding domain HRJ47_00790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HRJ47_00790 PF02817 e3 binding domain HRJ47_00790 PF00364 Biotin-requiring enzyme HRJ47_00800 PF01169 Uncharacterized protein family UPF0016 HRJ47_00805 PF07715 TonB-dependent Receptor Plug Domain HRJ47_00805 PF00593 TonB dependent receptor HRJ47_00810 PF01613 Flavin reductase like domain HRJ47_00810 PF00258 Flavodoxin HRJ47_00815 PF03692 Putative zinc- or iron-chelating domain HRJ47_00820 PF00571 CBS domain HRJ47_00820 PF00478 IMP dehydrogenase / GMP reductase domain HRJ47_00825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRJ47_00825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRJ47_00825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRJ47_00825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRJ47_00830 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HRJ47_00830 PF01243 Pyridoxamine 5'-phosphate oxidase HRJ47_00835 PF02272 DHHA1 domain HRJ47_00835 PF01368 DHH family HRJ47_00835 PF17768 RecJ OB domain HRJ47_00860 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRJ47_00865 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HRJ47_00870 PF04452 RNA methyltransferase HRJ47_00875 PF00924 Mechanosensitive ion channel HRJ47_00875 PF05552 Conserved TM helix HRJ47_00885 PF13193 AMP-binding enzyme C-terminal domain HRJ47_00885 PF16177 Acetyl-coenzyme A synthetase N-terminus HRJ47_00885 PF00501 AMP-binding enzyme HRJ47_00890 PF00857 Isochorismatase family HRJ47_00895 PF01037 Lrp/AsnC ligand binding domain HRJ47_00900 PF00296 Luciferase-like monooxygenase HRJ47_00905 PF03358 NADPH-dependent FMN reductase HRJ47_00910 PF00072 Response regulator receiver domain HRJ47_00910 PF00196 Bacterial regulatory proteins, luxR family HRJ47_00920 PF01627 Hpt domain HRJ47_00920 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_00920 PF00072 Response regulator receiver domain HRJ47_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_00920 PF00672 HAMP domain HRJ47_00925 PF04341 Protein of unknown function, DUF485 HRJ47_00930 PF00474 Sodium:solute symporter family HRJ47_00940 PF02028 BCCT, betaine/carnitine/choline family transporter HRJ47_00950 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_00955 PF17760 UvrA interaction domain HRJ47_00955 PF17755 UvrA DNA-binding domain HRJ47_00960 PF00440 Bacterial regulatory proteins, tetR family HRJ47_00960 PF16925 Tetracyclin repressor-like, C-terminal domain HRJ47_00965 PF00107 Zinc-binding dehydrogenase HRJ47_00965 PF08240 Alcohol dehydrogenase GroES-like domain HRJ47_00975 PF06942 GlpM protein HRJ47_00980 PF00106 short chain dehydrogenase HRJ47_00985 PF09278 MerR, DNA binding HRJ47_00985 PF00376 MerR family regulatory protein HRJ47_00990 PF03070 TENA/THI-4/PQQC family HRJ47_00990 PF08543 Phosphomethylpyrimidine kinase HRJ47_00990 PF02581 Thiamine monophosphate synthase HRJ47_01000 PF07690 Major Facilitator Superfamily HRJ47_01005 PF00436 Single-strand binding protein family HRJ47_01015 PF03591 AzlC protein HRJ47_01025 PF00324 Amino acid permease HRJ47_01030 PF00392 Bacterial regulatory proteins, gntR family HRJ47_01030 PF00155 Aminotransferase class I and II HRJ47_01035 PF00202 Aminotransferase class-III HRJ47_01040 PF00171 Aldehyde dehydrogenase family HRJ47_01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_01050 PF00857 Isochorismatase family HRJ47_01055 PF05726 Pirin C-terminal cupin domain HRJ47_01055 PF02678 Pirin HRJ47_01060 PF01593 Flavin containing amine oxidoreductase HRJ47_01105 PF07690 Major Facilitator Superfamily HRJ47_01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_01110 PF03466 LysR substrate binding domain HRJ47_01135 PF00248 Aldo/keto reductase family HRJ47_01140 PF02311 AraC-like ligand binding domain HRJ47_01140 PF12833 Helix-turn-helix domain HRJ47_01155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRJ47_01170 PF01638 HxlR-like helix-turn-helix HRJ47_01175 PF02525 Flavodoxin-like fold HRJ47_01190 PF12833 Helix-turn-helix domain HRJ47_01200 PF02705 K+ potassium transporter HRJ47_01230 PF00230 Major intrinsic protein HRJ47_01245 PF00977 Histidine biosynthesis protein HRJ47_01250 PF01636 Phosphotransferase enzyme family HRJ47_01265 PF03992 Antibiotic biosynthesis monooxygenase HRJ47_01280 PF00005 ABC transporter HRJ47_01280 PF00664 ABC transporter transmembrane region HRJ47_01285 PF00977 Histidine biosynthesis protein HRJ47_01300 PF00117 Glutamine amidotransferase class-I HRJ47_01305 PF00475 Imidazoleglycerol-phosphate dehydratase HRJ47_01325 PF00583 Acetyltransferase (GNAT) family HRJ47_01330 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HRJ47_01330 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HRJ47_01340 PF00672 HAMP domain HRJ47_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_01340 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_01345 PF00072 Response regulator receiver domain HRJ47_01345 PF00486 Transcriptional regulatory protein, C terminal HRJ47_01350 PF09371 Tex-like protein N-terminal domain HRJ47_01350 PF16921 Tex protein YqgF-like domain HRJ47_01350 PF00575 S1 RNA binding domain HRJ47_01350 PF17674 HHH domain HRJ47_01355 PF00916 Sulfate permease family HRJ47_01355 PF01740 STAS domain HRJ47_01360 PF00106 short chain dehydrogenase HRJ47_01365 PF01053 Cys/Met metabolism PLP-dependent enzyme HRJ47_01370 PF12848 ABC transporter HRJ47_01370 PF00005 ABC transporter HRJ47_01390 PF04191 Phospholipid methyltransferase HRJ47_01410 PF00529 HlyD membrane-fusion protein of T1SS HRJ47_01410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRJ47_01415 PF00873 AcrB/AcrD/AcrF family HRJ47_01420 PF01545 Cation efflux family HRJ47_01450 PF00324 Amino acid permease HRJ47_01465 PF00749 tRNA synthetases class I (E and Q), catalytic domain HRJ47_01480 PF01795 MraW methylase family HRJ47_01490 PF03717 Penicillin-binding Protein dimerisation domain HRJ47_01490 PF00905 Penicillin binding protein transpeptidase domain HRJ47_01495 PF08245 Mur ligase middle domain HRJ47_01495 PF02875 Mur ligase family, glutamate ligase domain HRJ47_01495 PF01225 Mur ligase family, catalytic domain HRJ47_01500 PF01225 Mur ligase family, catalytic domain HRJ47_01500 PF02875 Mur ligase family, glutamate ligase domain HRJ47_01500 PF08245 Mur ligase middle domain HRJ47_01505 PF00953 Glycosyl transferase family 4 HRJ47_01515 PF13847 Methyltransferase domain HRJ47_01520 PF17092 Penicillin-binding protein OB-like domain HRJ47_01520 PF00912 Transglycosylase HRJ47_01520 PF00905 Penicillin binding protein transpeptidase domain HRJ47_01525 PF11104 Type IV pilus assembly protein PilM; HRJ47_01530 PF05137 Fimbrial assembly protein (PilN) HRJ47_01535 PF04350 Pilus assembly protein, PilO HRJ47_01545 PF11741 AMIN domain HRJ47_01545 PF00263 Bacterial type II and III secretion system protein HRJ47_01545 PF03958 Bacterial type II/III secretion system short domain HRJ47_01545 PF07660 Secretin and TonB N terminus short domain HRJ47_01550 PF01202 Shikimate kinase HRJ47_01555 PF01761 3-dehydroquinate synthase HRJ47_01565 PF01645 Conserved region in glutamate synthase HRJ47_01565 PF01493 GXGXG motif HRJ47_01565 PF00310 Glutamine amidotransferases class-II HRJ47_01565 PF04898 Glutamate synthase central domain HRJ47_01570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HRJ47_01570 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_01580 PF04011 LemA family HRJ47_01585 PF04536 TPM domain HRJ47_01595 PF07963 Prokaryotic N-terminal methylation motif HRJ47_01595 PF00114 Pilin (bacterial filament) HRJ47_01600 PF04932 O-Antigen ligase HRJ47_01600 PF15864 Protein glycosylation ligase HRJ47_01600 PF11846 Virulence factor membrane-bound polymerase, C-terminal HRJ47_01605 PF00210 Ferritin-like domain HRJ47_01610 PF04324 BFD-like [2Fe-2S] binding domain HRJ47_01620 PF01042 Endoribonuclease L-PSP HRJ47_01625 PF13291 ACT domain HRJ47_01625 PF04607 Region found in RelA / SpoT proteins HRJ47_01625 PF02824 TGS domain HRJ47_01635 PF01192 RNA polymerase Rpb6 HRJ47_01640 PF00625 Guanylate kinase HRJ47_01645 PF02401 LytB protein HRJ47_01685 PF00886 Ribosomal protein S16 HRJ47_01690 PF01782 RimM N-terminal domain HRJ47_01690 PF05239 PRC-barrel domain HRJ47_01695 PF01746 tRNA (Guanine-1)-methyltransferase HRJ47_01700 PF01245 Ribosomal protein L19 HRJ47_01705 PF00561 alpha/beta hydrolase fold HRJ47_01710 PF03280 Proteobacterial lipase chaperone protein HRJ47_01715 PF01509 TruB family pseudouridylate synthase (N terminal domain) HRJ47_01715 PF16198 tRNA pseudouridylate synthase B C-terminal domain HRJ47_01715 PF09157 Pseudouridine synthase II TruB, C-terminal HRJ47_01720 PF01925 Sulfite exporter TauE/SafE HRJ47_01730 PF00892 EamA-like transporter family HRJ47_01735 PF00892 EamA-like transporter family HRJ47_01740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRJ47_01740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRJ47_01745 PF01565 FAD binding domain HRJ47_01745 PF02913 FAD linked oxidases, C-terminal domain HRJ47_01755 PF03992 Antibiotic biosynthesis monooxygenase HRJ47_01760 PF02525 Flavodoxin-like fold HRJ47_01770 PF07690 Major Facilitator Superfamily HRJ47_01775 PF12805 FUSC-like inner membrane protein yccS HRJ47_01780 PF00080 Copper/zinc superoxide dismutase (SODC) HRJ47_01785 PF01594 AI-2E family transporter HRJ47_01790 PF13614 AAA domain HRJ47_01810 PF08241 Methyltransferase domain HRJ47_01820 PF00324 Amino acid permease HRJ47_01825 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HRJ47_01825 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HRJ47_01830 PF00202 Aminotransferase class-III HRJ47_01835 PF04958 Arginine N-succinyltransferase beta subunit HRJ47_01840 PF00171 Aldehyde dehydrogenase family HRJ47_01845 PF04996 Succinylarginine dihydrolase HRJ47_01850 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HRJ47_01865 PF00082 Subtilase family HRJ47_01865 PF05922 Peptidase inhibitor I9 HRJ47_01880 PF03466 LysR substrate binding domain HRJ47_01880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_01885 PF00892 EamA-like transporter family HRJ47_01900 PF02092 Glycyl-tRNA synthetase beta subunit HRJ47_01900 PF05746 DALR anticodon binding domain HRJ47_01905 PF02091 Glycyl-tRNA synthetase alpha subunit HRJ47_01930 PF01743 Poly A polymerase head domain HRJ47_01930 PF00571 CBS domain HRJ47_01935 PF04024 PspC domain HRJ47_01945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_01945 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_01945 PF12806 Acetyl-CoA dehydrogenase C-terminal like HRJ47_01945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_01955 PF08501 Shikimate dehydrogenase substrate binding domain HRJ47_01955 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HRJ47_01955 PF01488 Shikimate / quinate 5-dehydrogenase HRJ47_01960 PF01218 Coproporphyrinogen III oxidase HRJ47_01965 PF00925 GTP cyclohydrolase II HRJ47_01970 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HRJ47_01970 PF02780 Transketolase, C-terminal domain HRJ47_01970 PF02779 Transketolase, pyrimidine binding domain HRJ47_01975 PF00459 Inositol monophosphatase family HRJ47_01980 PF00270 DEAD/DEAH box helicase HRJ47_01980 PF03880 DbpA RNA binding domain HRJ47_01980 PF12343 Cold shock protein DEAD box A HRJ47_01980 PF00271 Helicase conserved C-terminal domain HRJ47_01990 PF00005 ABC transporter HRJ47_01995 PF02405 Permease MlaE HRJ47_02005 PF05494 MlaC protein HRJ47_02015 PF01544 CorA-like Mg2+ transporter protein HRJ47_02020 PF03641 Possible lysine decarboxylase HRJ47_02025 PF00293 NUDIX domain HRJ47_02030 PF00156 Phosphoribosyl transferase domain HRJ47_02035 PF00270 DEAD/DEAH box helicase HRJ47_02035 PF17191 RecG wedge domain HRJ47_02035 PF00271 Helicase conserved C-terminal domain HRJ47_02050 PF01553 Acyltransferase HRJ47_02060 PF00375 Sodium:dicarboxylate symporter family HRJ47_02070 PF01926 50S ribosome-binding GTPase HRJ47_02075 PF02082 Transcriptional regulator HRJ47_02080 PF00042 Globin HRJ47_02080 PF00175 Oxidoreductase NAD-binding domain HRJ47_02080 PF00970 Oxidoreductase FAD-binding domain HRJ47_02090 PF05872 Bacterial protein of unknown function (DUF853) HRJ47_02095 PF01053 Cys/Met metabolism PLP-dependent enzyme HRJ47_02100 PF00117 Glutamine amidotransferase class-I HRJ47_02105 PF00338 Ribosomal protein S10p/S20e HRJ47_02110 PF00297 Ribosomal protein L3 HRJ47_02115 PF00573 Ribosomal protein L4/L1 family HRJ47_02120 PF00276 Ribosomal protein L23 HRJ47_02125 PF03947 Ribosomal Proteins L2, C-terminal domain HRJ47_02125 PF00181 Ribosomal Proteins L2, RNA binding domain HRJ47_02130 PF00203 Ribosomal protein S19 HRJ47_02135 PF00237 Ribosomal protein L22p/L17e HRJ47_02140 PF07650 KH domain HRJ47_02140 PF00189 Ribosomal protein S3, C-terminal domain HRJ47_02145 PF00252 Ribosomal protein L16p/L10e HRJ47_02150 PF00831 Ribosomal L29 protein HRJ47_02155 PF00366 Ribosomal protein S17 HRJ47_02160 PF00238 Ribosomal protein L14p/L23e HRJ47_02165 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HRJ47_02165 PF00467 KOW motif HRJ47_02170 PF00673 ribosomal L5P family C-terminus HRJ47_02170 PF00281 Ribosomal protein L5 HRJ47_02175 PF00253 Ribosomal protein S14p/S29e HRJ47_02180 PF00410 Ribosomal protein S8 HRJ47_02185 PF00347 Ribosomal protein L6 HRJ47_02190 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HRJ47_02195 PF03719 Ribosomal protein S5, C-terminal domain HRJ47_02195 PF00333 Ribosomal protein S5, N-terminal domain HRJ47_02200 PF00327 Ribosomal protein L30p/L7e HRJ47_02205 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HRJ47_02210 PF00344 SecY translocase HRJ47_02215 PF00444 Ribosomal protein L36 HRJ47_02220 PF00416 Ribosomal protein S13/S18 HRJ47_02225 PF00411 Ribosomal protein S11 HRJ47_02230 PF00163 Ribosomal protein S4/S9 N-terminal domain HRJ47_02230 PF01479 S4 domain HRJ47_02235 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HRJ47_02235 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HRJ47_02235 PF01000 RNA polymerase Rpb3/RpoA insert domain HRJ47_02240 PF01196 Ribosomal protein L17 HRJ47_02245 PF00743 Flavin-binding monooxygenase-like HRJ47_02250 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_02250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_02250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_02255 PF03937 Flavinator of succinate dehydrogenase HRJ47_02285 PF09526 Probable metal-binding protein (DUF2387) HRJ47_02290 PF01432 Peptidase family M3 HRJ47_02295 PF08461 Ribonuclease R winged-helix domain HRJ47_02295 PF08206 Ribonuclease B OB domain HRJ47_02295 PF17876 Cold shock domain HRJ47_02295 PF00773 RNB domain HRJ47_02295 PF00575 S1 RNA binding domain HRJ47_02345 PF01557 Fumarylacetoacetate (FAA) hydrolase family HRJ47_02350 PF03631 Virulence factor BrkB HRJ47_02355 PF03358 NADPH-dependent FMN reductase HRJ47_02380 PF02130 Uncharacterized protein family UPF0054 HRJ47_02385 PF02562 PhoH-like protein HRJ47_02390 PF00919 Uncharacterized protein family UPF0004 HRJ47_02390 PF04055 Radical SAM superfamily HRJ47_02390 PF01938 TRAM domain HRJ47_02395 PF01464 Transglycosylase SLT domain HRJ47_02395 PF10145 Phage-related minor tail protein HRJ47_02395 PF01551 Peptidase family M23 HRJ47_02405 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HRJ47_02405 PF00056 lactate/malate dehydrogenase, NAD binding domain HRJ47_02425 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HRJ47_02430 PF01066 CDP-alcohol phosphatidyltransferase HRJ47_02475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_02475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_02475 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_02480 PF13302 Acetyltransferase (GNAT) domain HRJ47_02485 PF00440 Bacterial regulatory proteins, tetR family HRJ47_02485 PF17932 Tetracyclin repressor-like, C-terminal domain HRJ47_02500 PF01039 Carboxyl transferase domain HRJ47_02505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_02505 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_02505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_02510 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_02515 PF00364 Biotin-requiring enzyme HRJ47_02515 PF00289 Biotin carboxylase, N-terminal domain HRJ47_02515 PF02785 Biotin carboxylase C-terminal domain HRJ47_02515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRJ47_02545 PF04386 Stringent starvation protein B HRJ47_02550 PF00043 Glutathione S-transferase, C-terminal domain HRJ47_02550 PF13417 Glutathione S-transferase, N-terminal domain HRJ47_02555 PF00380 Ribosomal protein S9/S16 HRJ47_02560 PF00572 Ribosomal protein L13 HRJ47_02565 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HRJ47_02570 PF00398 Ribosomal RNA adenine dimethylase HRJ47_02575 PF00149 Calcineurin-like phosphoesterase HRJ47_02595 PF01926 50S ribosome-binding GTPase HRJ47_02595 PF13167 GTP-binding GTPase N-terminal HRJ47_02595 PF16360 GTP-binding GTPase Middle Region HRJ47_02605 PF13091 PLD-like domain HRJ47_02610 PF00149 Calcineurin-like phosphoesterase HRJ47_02610 PF10518 TAT (twin-arginine translocation) pathway signal sequence HRJ47_02615 PF01389 OmpA-like transmembrane domain HRJ47_02615 PF00691 OmpA family HRJ47_02620 PF17152 Periplasmic sensor domain HRJ47_02620 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_02625 PF13689 YfiR/HmsC-like HRJ47_02660 PF00403 Heavy-metal-associated domain HRJ47_02660 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_02660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRJ47_02670 PF00753 Metallo-beta-lactamase superfamily HRJ47_02670 PF04273 Putative phosphatase (DUF442) HRJ47_02675 PF00561 alpha/beta hydrolase fold HRJ47_02680 PF00085 Thioredoxin HRJ47_02685 PF03061 Thioesterase superfamily HRJ47_02700 PF04461 Protein of unknown function (DUF520) HRJ47_02710 PF01266 FAD dependent oxidoreductase HRJ47_02710 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HRJ47_02720 PF03795 YCII-related domain HRJ47_02725 PF04279 Intracellular septation protein A HRJ47_02735 PF01062 Bestrophin, RFP-TM, chloride channel HRJ47_02740 PF04002 RadC-like JAB domain HRJ47_02745 PF02441 Flavoprotein HRJ47_02745 PF04127 DNA / pantothenate metabolism flavoprotein HRJ47_02750 PF02355 Protein export membrane protein HRJ47_02750 PF07549 SecD/SecF GG Motif HRJ47_02755 PF02355 Protein export membrane protein HRJ47_02755 PF13721 SecD export protein N-terminal TM region HRJ47_02755 PF07549 SecD/SecF GG Motif HRJ47_02760 PF02699 Preprotein translocase subunit HRJ47_02765 PF01702 Queuine tRNA-ribosyltransferase HRJ47_02775 PF02547 Queuosine biosynthesis protein HRJ47_02785 PF01627 Hpt domain HRJ47_02785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRJ47_02785 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_02785 PF00672 HAMP domain HRJ47_02785 PF00072 Response regulator receiver domain HRJ47_02790 PF08335 GlnD PII-uridylyltransferase HRJ47_02790 PF03710 Glutamate-ammonia ligase adenylyltransferase HRJ47_02795 PF01063 Amino-transferase class IV HRJ47_02810 PF01522 Polysaccharide deacetylase HRJ47_02815 PF00535 Glycosyl transferase family 2 HRJ47_02820 PF00534 Glycosyl transferases group 1 HRJ47_02820 PF13439 Glycosyltransferase Family 4 HRJ47_02850 PF02938 GAD domain HRJ47_02850 PF00152 tRNA synthetases class II (D, K and N) HRJ47_02850 PF01336 OB-fold nucleic acid binding domain HRJ47_02860 PF07715 TonB-dependent Receptor Plug Domain HRJ47_02860 PF00593 TonB dependent receptor HRJ47_02880 PF06146 Phosphate-starvation-inducible E HRJ47_02885 PF02798 Glutathione S-transferase, N-terminal domain HRJ47_02885 PF00043 Glutathione S-transferase, C-terminal domain HRJ47_02890 PF03466 LysR substrate binding domain HRJ47_02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_02895 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_02895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_02895 PF12806 Acetyl-CoA dehydrogenase C-terminal like HRJ47_02895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_02900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_02900 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_02900 PF12806 Acetyl-CoA dehydrogenase C-terminal like HRJ47_02900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_02910 PF00672 HAMP domain HRJ47_02910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_02910 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_02915 PF00486 Transcriptional regulatory protein, C terminal HRJ47_02915 PF00072 Response regulator receiver domain HRJ47_02925 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HRJ47_02945 PF01923 Cobalamin adenosyltransferase HRJ47_02950 PF00593 TonB dependent receptor HRJ47_02950 PF07715 TonB-dependent Receptor Plug Domain HRJ47_02955 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HRJ47_02960 PF00291 Pyridoxal-phosphate dependent enzyme HRJ47_02985 PF00290 Tryptophan synthase alpha chain HRJ47_02990 PF01039 Carboxyl transferase domain HRJ47_02995 PF08245 Mur ligase middle domain HRJ47_02995 PF02875 Mur ligase family, glutamate ligase domain HRJ47_03010 PF00753 Metallo-beta-lactamase superfamily HRJ47_03015 PF00578 AhpC/TSA family HRJ47_03015 PF10417 C-terminal domain of 1-Cys peroxiredoxin HRJ47_03020 PF01043 SecA preprotein cross-linking domain HRJ47_03020 PF07516 SecA Wing and Scaffold domain HRJ47_03020 PF07517 SecA DEAD-like domain HRJ47_03020 PF02810 SEC-C motif HRJ47_03030 PF00083 Sugar (and other) transporter HRJ47_03030 PF07690 Major Facilitator Superfamily HRJ47_03035 PF03006 Haemolysin-III related HRJ47_03055 PF13673 Acetyltransferase (GNAT) domain HRJ47_03070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HRJ47_03070 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_03070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HRJ47_03075 PF02803 Thiolase, C-terminal domain HRJ47_03075 PF00108 Thiolase, N-terminal domain HRJ47_03080 PF12833 Helix-turn-helix domain HRJ47_03080 PF02311 AraC-like ligand binding domain HRJ47_03085 PF02515 CoA-transferase family III HRJ47_03090 PF04966 Carbohydrate-selective porin, OprB family HRJ47_03095 PF01011 PQQ enzyme repeat HRJ47_03100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HRJ47_03100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HRJ47_03110 PF00893 Small Multidrug Resistance protein HRJ47_03120 PF00108 Thiolase, N-terminal domain HRJ47_03120 PF02803 Thiolase, C-terminal domain HRJ47_03125 PF00114 Pilin (bacterial filament) HRJ47_03125 PF07963 Prokaryotic N-terminal methylation motif HRJ47_03130 PF00691 OmpA family HRJ47_03130 PF13505 Outer membrane protein beta-barrel domain HRJ47_03140 PF01139 tRNA-splicing ligase RtcB HRJ47_03145 PF00324 Amino acid permease HRJ47_03150 PF08468 Methyltransferase small domain N-terminal HRJ47_03150 PF05175 Methyltransferase small domain HRJ47_03155 PF00860 Permease family HRJ47_03160 PF03144 Elongation factor Tu domain 2 HRJ47_03160 PF00009 Elongation factor Tu GTP binding domain HRJ47_03160 PF00679 Elongation factor G C-terminus HRJ47_03165 PF01741 Large-conductance mechanosensitive channel, MscL HRJ47_03175 PF02264 LamB porin HRJ47_03185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HRJ47_03185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HRJ47_03185 PF06827 Zinc finger found in FPG and IleRS HRJ47_03190 PF02245 Methylpurine-DNA glycosylase (MPG) HRJ47_03195 PF00593 TonB dependent receptor HRJ47_03195 PF07715 TonB-dependent Receptor Plug Domain HRJ47_03200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRJ47_03205 PF03547 Membrane transport protein HRJ47_03215 PF10411 Disulfide bond isomerase protein N-terminus HRJ47_03215 PF13098 Thioredoxin-like domain HRJ47_03220 PF01571 Aminomethyltransferase folate-binding domain HRJ47_03235 PF04343 Protein of unknown function, DUF488 HRJ47_03240 PF03831 PhnA domain HRJ47_03240 PF08274 PhnA Zinc-Ribbon HRJ47_03245 PF07411 Domain of unknown function (DUF1508) HRJ47_03250 PF04073 Aminoacyl-tRNA editing domain HRJ47_03250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRJ47_03250 PF03129 Anticodon binding domain HRJ47_03255 PF00873 AcrB/AcrD/AcrF family HRJ47_03270 PF00072 Response regulator receiver domain HRJ47_03275 PF00072 Response regulator receiver domain HRJ47_03280 PF01584 CheW-like domain HRJ47_03285 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HRJ47_03285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HRJ47_03290 PF01584 CheW-like domain HRJ47_03290 PF01627 Hpt domain HRJ47_03290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_03290 PF00072 Response regulator receiver domain HRJ47_03305 PF07687 Peptidase dimerisation domain HRJ47_03305 PF01546 Peptidase family M20/M25/M40 HRJ47_03310 PF08085 Entericidin EcnA/B family HRJ47_03320 PF04304 Protein of unknown function (DUF454) HRJ47_03325 PF03734 L,D-transpeptidase catalytic domain HRJ47_03325 PF17969 L,D-transpeptidase C-terminal domain HRJ47_03365 PF00258 Flavodoxin HRJ47_03365 PF00667 FAD binding domain HRJ47_03365 PF00175 Oxidoreductase NAD-binding domain HRJ47_03375 PF12805 FUSC-like inner membrane protein yccS HRJ47_03380 PF07690 Major Facilitator Superfamily HRJ47_03385 PF00881 Nitroreductase family HRJ47_03400 PF01235 Sodium:alanine symporter family HRJ47_03405 PF01734 Patatin-like phospholipase HRJ47_03410 PF13291 ACT domain HRJ47_03410 PF00291 Pyridoxal-phosphate dependent enzyme HRJ47_03415 PF05992 SbmA/BacA-like family HRJ47_03420 PF05649 Peptidase family M13 HRJ47_03420 PF01431 Peptidase family M13 HRJ47_03445 PF02637 GatB domain HRJ47_03445 PF02934 GatB/GatE catalytic domain HRJ47_03450 PF01425 Amidase HRJ47_03455 PF02686 Glu-tRNAGln amidotransferase C subunit HRJ47_03465 PF04085 rod shape-determining protein MreC HRJ47_03470 PF04093 rod shape-determining protein MreD HRJ47_03475 PF02545 Maf-like protein HRJ47_03480 PF00575 S1 RNA binding domain HRJ47_03480 PF10150 Ribonuclease E/G family HRJ47_03490 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain HRJ47_03490 PF06974 Protein of unknown function (DUF1298) HRJ47_03495 PF01507 Phosphoadenosine phosphosulfate reductase family HRJ47_03510 PF02525 Flavodoxin-like fold HRJ47_03530 PF02673 Bacitracin resistance protein BacA HRJ47_03535 PF06719 AraC-type transcriptional regulator N-terminus HRJ47_03535 PF12833 Helix-turn-helix domain HRJ47_03540 PF02801 Beta-ketoacyl synthase, C-terminal domain HRJ47_03540 PF08659 KR domain HRJ47_03540 PF09277 Erythronolide synthase, docking HRJ47_03540 PF14765 Polyketide synthase dehydratase HRJ47_03540 PF00698 Acyl transferase domain HRJ47_03540 PF08240 Alcohol dehydrogenase GroES-like domain HRJ47_03540 PF00109 Beta-ketoacyl synthase, N-terminal domain HRJ47_03540 PF16197 Ketoacyl-synthetase C-terminal extension HRJ47_03540 PF08990 Erythronolide synthase docking HRJ47_03540 PF00550 Phosphopantetheine attachment site HRJ47_03545 PF01965 DJ-1/PfpI family HRJ47_03560 PF00324 Amino acid permease HRJ47_03565 PF04303 PrpF protein HRJ47_03570 PF00348 Polyprenyl synthetase HRJ47_03575 PF04237 YjbR HRJ47_03580 PF01145 SPFH domain / Band 7 family HRJ47_03590 PF01734 Patatin-like phospholipase HRJ47_03615 PF08019 Phosphoethanolamine transferase EptA/EptB HRJ47_03615 PF00884 Sulfatase HRJ47_03620 PF00486 Transcriptional regulatory protein, C terminal HRJ47_03620 PF00072 Response regulator receiver domain HRJ47_03625 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_03625 PF08521 Two-component sensor kinase N-terminal HRJ47_03625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_03635 PF00909 Ammonium Transporter Family HRJ47_03640 PF03466 LysR substrate binding domain HRJ47_03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_03665 PF08264 Anticodon-binding domain of tRNA HRJ47_03665 PF00133 tRNA synthetases class I (I, L, M and V) HRJ47_03665 PF10458 Valyl tRNA synthetase tRNA binding arm HRJ47_03685 PF01906 Putative heavy-metal-binding HRJ47_03690 PF01906 Putative heavy-metal-binding HRJ47_03695 PF02321 Outer membrane efflux protein HRJ47_03700 PF00873 AcrB/AcrD/AcrF family HRJ47_03705 PF00529 HlyD membrane-fusion protein of T1SS HRJ47_03705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRJ47_03710 PF01569 PAP2 superfamily HRJ47_03720 PF00348 Polyprenyl synthetase HRJ47_03725 PF00829 Ribosomal prokaryotic L21 protein HRJ47_03730 PF01016 Ribosomal L27 protein HRJ47_03735 PF03548 Outer membrane lipoprotein carrier protein LolA HRJ47_03745 PF02403 Seryl-tRNA synthetase N-terminal domain HRJ47_03745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRJ47_03750 PF10414 Sirohaem synthase dimerisation region HRJ47_03750 PF14824 Sirohaem biosynthesis protein central HRJ47_03750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRJ47_03755 PF00588 SpoU rRNA Methylase family HRJ47_03765 PF03358 NADPH-dependent FMN reductase HRJ47_03770 PF13520 Amino acid permease HRJ47_03775 PF00465 Iron-containing alcohol dehydrogenase HRJ47_03785 PF03099 Biotin/lipoate A/B protein ligase family HRJ47_03790 PF04359 Protein of unknown function (DUF493) HRJ47_03795 PF04542 Sigma-70 region 2 HRJ47_03795 PF04539 Sigma-70 region 3 HRJ47_03795 PF04545 Sigma-70, region 4 HRJ47_03795 PF00140 Sigma-70 factor, region 1.2 HRJ47_03795 PF03979 Sigma-70 factor, region 1.1 HRJ47_03795 PF04546 Sigma-70, non-essential region HRJ47_03815 PF00581 Rhodanese-like domain HRJ47_03815 PF17773 UPF0176 acylphosphatase like domain HRJ47_03825 PF00285 Citrate synthase, C-terminal domain HRJ47_03835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HRJ47_03840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HRJ47_03845 PF02910 Fumarate reductase flavoprotein C-term HRJ47_03845 PF00890 FAD binding domain HRJ47_03850 PF13085 2Fe-2S iron-sulfur cluster binding domain HRJ47_03865 PF00676 Dehydrogenase E1 component HRJ47_03865 PF16078 2-oxoglutarate dehydrogenase N-terminus HRJ47_03865 PF02779 Transketolase, pyrimidine binding domain HRJ47_03865 PF16870 2-oxoglutarate dehydrogenase C-terminal HRJ47_03870 PF02817 e3 binding domain HRJ47_03870 PF00364 Biotin-requiring enzyme HRJ47_03870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HRJ47_03875 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_03875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRJ47_03880 PF08442 ATP-grasp domain HRJ47_03880 PF00549 CoA-ligase HRJ47_03885 PF00549 CoA-ligase HRJ47_03885 PF02629 CoA binding domain HRJ47_03890 PF00579 tRNA synthetases class I (W and Y) HRJ47_03895 PF05661 Protein of unknown function (DUF808) HRJ47_03900 PF04228 Putative neutral zinc metallopeptidase HRJ47_03905 PF00999 Sodium/hydrogen exchanger family HRJ47_03920 PF09587 Bacterial capsule synthesis protein PGA_cap HRJ47_03930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRJ47_03940 PF00582 Universal stress protein family HRJ47_03945 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_03960 PF00440 Bacterial regulatory proteins, tetR family HRJ47_03965 PF03449 Transcription elongation factor, N-terminal HRJ47_03965 PF01272 Transcription elongation factor, GreA/GreB, C-term HRJ47_03970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRJ47_03970 PF02142 MGS-like domain HRJ47_03970 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HRJ47_03975 PF00117 Glutamine amidotransferase class-I HRJ47_03975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HRJ47_03995 PF01985 CRS1 / YhbY (CRM) domain HRJ47_04000 PF01728 FtsJ-like methyltransferase HRJ47_04005 PF17862 AAA+ lid domain HRJ47_04005 PF06480 FtsH Extracellular HRJ47_04005 PF00004 ATPase family associated with various cellular activities (AAA) HRJ47_04005 PF01434 Peptidase family M41 HRJ47_04010 PF00809 Pterin binding enzyme HRJ47_04030 PF09423 PhoD-like phosphatase HRJ47_04030 PF16655 PhoD-like phosphatase, N-terminal domain HRJ47_04045 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HRJ47_04045 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HRJ47_04060 PF00083 Sugar (and other) transporter HRJ47_04065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRJ47_04065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRJ47_04070 PF01266 FAD dependent oxidoreductase HRJ47_04070 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HRJ47_04075 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain HRJ47_04075 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain HRJ47_04080 PF00781 Diacylglycerol kinase catalytic domain HRJ47_04085 PF00149 Calcineurin-like phosphoesterase HRJ47_04090 PF00166 Chaperonin 10 Kd subunit HRJ47_04095 PF00118 TCP-1/cpn60 chaperonin family HRJ47_04100 PF01219 Prokaryotic diacylglycerol kinase HRJ47_04110 PF03009 Glycerophosphoryl diester phosphodiesterase family HRJ47_04115 PF00873 AcrB/AcrD/AcrF family HRJ47_04125 PF01435 Peptidase family M48 HRJ47_04130 PF01464 Transglycosylase SLT domain HRJ47_04135 PF01171 PP-loop family HRJ47_04145 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRJ47_04145 PF01464 Transglycosylase SLT domain HRJ47_04150 PF01272 Transcription elongation factor, GreA/GreB, C-term HRJ47_04150 PF03449 Transcription elongation factor, N-terminal HRJ47_04160 PF13356 Arm DNA-binding domain HRJ47_04160 PF00589 Phage integrase family HRJ47_04225 PF05656 Protein of unknown function (DUF805) HRJ47_04315 PF13087 AAA domain HRJ47_04315 PF13086 AAA domain HRJ47_04315 PF13087 AAA domain HRJ47_04315 PF13195 Protein of unknown function (DUF4011) HRJ47_04315 PF13195 Protein of unknown function (DUF4011) HRJ47_04315 PF13086 AAA domain HRJ47_04345 PF03466 LysR substrate binding domain HRJ47_04345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_04350 PF03180 NLPA lipoprotein HRJ47_04365 PF00300 Histidine phosphatase superfamily (branch 1) HRJ47_04370 PF00480 ROK family HRJ47_04385 PF00529 HlyD membrane-fusion protein of T1SS HRJ47_04385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRJ47_04390 PF00873 AcrB/AcrD/AcrF family HRJ47_04395 PF00881 Nitroreductase family HRJ47_04410 PF02595 Glycerate kinase family HRJ47_04415 PF00384 Molybdopterin oxidoreductase HRJ47_04420 PF02634 FdhD/NarQ family HRJ47_04425 PF06803 Protein of unknown function (DUF1232) HRJ47_04430 PF11890 Domain of unknown function (DUF3410) HRJ47_04430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRJ47_04430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRJ47_04435 PF00152 tRNA synthetases class II (D, K and N) HRJ47_04445 PF18073 Rubredoxin metal binding domain HRJ47_04450 PF01235 Sodium:alanine symporter family HRJ47_04455 PF00324 Amino acid permease HRJ47_04465 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HRJ47_04465 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HRJ47_04470 PF01678 Diaminopimelate epimerase HRJ47_04475 PF01810 LysE type translocator HRJ47_04480 PF00589 Phage integrase family HRJ47_04480 PF02899 Phage integrase, N-terminal SAM-like domain HRJ47_04485 PF01012 Electron transfer flavoprotein domain HRJ47_04490 PF01012 Electron transfer flavoprotein domain HRJ47_04490 PF00766 Electron transfer flavoprotein FAD-binding domain HRJ47_04495 PF00521 DNA gyrase/topoisomerase IV, subunit A HRJ47_04495 PF03989 DNA gyrase C-terminal domain, beta-propeller HRJ47_04510 PF13533 Biotin-lipoyl like HRJ47_04520 PF00266 Aminotransferase class-V HRJ47_04530 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HRJ47_04540 PF12704 MacB-like periplasmic core domain HRJ47_04540 PF02687 FtsX-like permease family HRJ47_04545 PF00005 ABC transporter HRJ47_04550 PF00753 Metallo-beta-lactamase superfamily HRJ47_04550 PF13567 Domain of unknown function (DUF4131) HRJ47_04550 PF03772 Competence protein HRJ47_04560 PF06965 Na+/H+ antiporter 1 HRJ47_04560 PF01343 Peptidase family S49 HRJ47_04565 PF12697 Alpha/beta hydrolase family HRJ47_04570 PF00551 Formyl transferase HRJ47_04575 PF00586 AIR synthase related protein, N-terminal domain HRJ47_04575 PF02769 AIR synthase related protein, C-terminal domain HRJ47_04580 PF01594 AI-2E family transporter HRJ47_04585 PF00308 Bacterial dnaA protein HRJ47_04585 PF08299 Bacterial dnaA protein helix-turn-helix HRJ47_04585 PF11638 DnaA N-terminal domain HRJ47_04615 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRJ47_04615 PF00588 SpoU rRNA Methylase family HRJ47_04620 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HRJ47_04630 PF00691 OmpA family HRJ47_04635 PF04052 TolB amino-terminal domain HRJ47_04635 PF07676 WD40-like Beta Propeller Repeat HRJ47_04645 PF02472 Biopolymer transport protein ExbD/TolR HRJ47_04650 PF01618 MotA/TolQ/ExbB proton channel family HRJ47_04655 PF03061 Thioesterase superfamily HRJ47_04660 PF07687 Peptidase dimerisation domain HRJ47_04660 PF01546 Peptidase family M20/M25/M40 HRJ47_04665 PF17864 RuvB AAA lid domain HRJ47_04665 PF05491 RuvB C-terminal winged helix domain HRJ47_04665 PF05496 Holliday junction DNA helicase RuvB P-loop domain HRJ47_04670 PF07499 RuvA, C-terminal domain HRJ47_04670 PF01330 RuvA N terminal domain HRJ47_04675 PF01966 HD domain HRJ47_04680 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HRJ47_04680 PF02769 AIR synthase related protein, C-terminal domain HRJ47_04680 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HRJ47_04685 PF07690 Major Facilitator Superfamily HRJ47_04690 PF01784 NIF3 (NGG1p interacting factor 3) HRJ47_04695 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_04700 PF00293 NUDIX domain HRJ47_04700 PF01467 Cytidylyltransferase-like HRJ47_04715 PF00578 AhpC/TSA family HRJ47_04730 PF06508 Queuosine biosynthesis protein QueC HRJ47_04740 PF14602 Hexapeptide repeat of succinyl-transferase HRJ47_04740 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_04740 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HRJ47_04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_04750 PF03466 LysR substrate binding domain HRJ47_04755 PF00005 ABC transporter HRJ47_04755 PF12857 TOBE-like domain HRJ47_04760 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_04765 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_04780 PF01063 Amino-transferase class IV HRJ47_04785 PF02618 YceG-like family HRJ47_04790 PF02223 Thymidylate kinase HRJ47_04800 PF00890 FAD binding domain HRJ47_04800 PF02910 Fumarate reductase flavoprotein C-term HRJ47_04805 PF13180 PDZ domain HRJ47_04815 PF00009 Elongation factor Tu GTP binding domain HRJ47_04815 PF06421 GTP-binding protein LepA C-terminus HRJ47_04815 PF00679 Elongation factor G C-terminus HRJ47_04815 PF03144 Elongation factor Tu domain 2 HRJ47_04820 PF10502 Signal peptidase, peptidase S26 HRJ47_04830 PF00035 Double-stranded RNA binding motif HRJ47_04830 PF14622 Ribonuclease-III-like HRJ47_04835 PF07650 KH domain HRJ47_04835 PF01926 50S ribosome-binding GTPase HRJ47_04845 PF11967 Recombination protein O N terminal HRJ47_04845 PF02565 Recombination protein O C terminal HRJ47_04850 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HRJ47_04855 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HRJ47_04860 PF00106 short chain dehydrogenase HRJ47_04885 PF00892 EamA-like transporter family HRJ47_04890 PF00155 Aminotransferase class I and II HRJ47_04900 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_04900 PF17151 Periplasmic sensor domain HRJ47_04910 PF02151 UvrB/uvrC motif HRJ47_04910 PF12344 Ultra-violet resistance protein B HRJ47_04910 PF00271 Helicase conserved C-terminal domain HRJ47_04910 PF04851 Type III restriction enzyme, res subunit HRJ47_04910 PF17757 UvrB interaction domain HRJ47_04920 PF00892 EamA-like transporter family HRJ47_04925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRJ47_04925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRJ47_04940 PF01926 50S ribosome-binding GTPase HRJ47_04940 PF01018 GTP1/OBG HRJ47_04945 PF00696 Amino acid kinase family HRJ47_04945 PF01472 PUA domain HRJ47_04955 PF07759 Protein of unknown function (DUF1615) HRJ47_04960 PF01207 Dihydrouridine synthase (Dus) HRJ47_04965 PF03060 Nitronate monooxygenase HRJ47_04980 PF02350 UDP-N-acetylglucosamine 2-epimerase HRJ47_05010 PF00875 DNA photolyase HRJ47_05010 PF03441 FAD binding domain of DNA photolyase HRJ47_05015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRJ47_05020 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_05025 PF00768 D-alanyl-D-alanine carboxypeptidase HRJ47_05025 PF07943 Penicillin-binding protein 5, C-terminal domain HRJ47_05035 PF03971 Monomeric isocitrate dehydrogenase HRJ47_05040 PF00849 RNA pseudouridylate synthase HRJ47_05045 PF00180 Isocitrate/isopropylmalate dehydrogenase HRJ47_05055 PF06779 Uncharacterised MFS-type transporter YbfB HRJ47_05060 PF03466 LysR substrate binding domain HRJ47_05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_05065 PF00375 Sodium:dicarboxylate symporter family HRJ47_05070 PF02567 Phenazine biosynthesis-like protein HRJ47_05075 PF00675 Insulinase (Peptidase family M16) HRJ47_05075 PF05193 Peptidase M16 inactive domain HRJ47_05100 PF02581 Thiamine monophosphate synthase HRJ47_05105 PF00202 Aminotransferase class-III HRJ47_05115 PF00849 RNA pseudouridylate synthase HRJ47_05120 PF12137 RNA polymerase recycling family C-terminal HRJ47_05120 PF00271 Helicase conserved C-terminal domain HRJ47_05120 PF18339 RapA N-terminal Tudor like domain 1 HRJ47_05120 PF18337 RapA N-terminal Tudor like domain HRJ47_05120 PF00176 SNF2 family N-terminal domain HRJ47_05130 PF00440 Bacterial regulatory proteins, tetR family HRJ47_05135 PF00970 Oxidoreductase FAD-binding domain HRJ47_05135 PF00175 Oxidoreductase NAD-binding domain HRJ47_05135 PF00111 2Fe-2S iron-sulfur cluster binding domain HRJ47_05140 PF00487 Fatty acid desaturase HRJ47_05150 PF00202 Aminotransferase class-III HRJ47_05155 PF00282 Pyridoxal-dependent decarboxylase conserved domain HRJ47_05160 PF00171 Aldehyde dehydrogenase family HRJ47_05165 PF01037 Lrp/AsnC ligand binding domain HRJ47_05170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRJ47_05170 PF00205 Thiamine pyrophosphate enzyme, central domain HRJ47_05170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRJ47_05175 PF00324 Amino acid permease HRJ47_05180 PF12849 PBP superfamily domain HRJ47_05185 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_05190 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_05195 PF00005 ABC transporter HRJ47_05200 PF08496 Peptidase family S49 N-terminal HRJ47_05200 PF01343 Peptidase family S49 HRJ47_05215 PF08328 Adenylosuccinate lyase C-terminal HRJ47_05215 PF00206 Lyase HRJ47_05220 PF04356 Protein of unknown function (DUF489) HRJ47_05230 PF13344 Haloacid dehalogenase-like hydrolase HRJ47_05230 PF00293 NUDIX domain HRJ47_05235 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_05240 PF00768 D-alanyl-D-alanine carboxypeptidase HRJ47_05240 PF07943 Penicillin-binding protein 5, C-terminal domain HRJ47_05255 PF01975 Survival protein SurE HRJ47_05260 PF01551 Peptidase family M23 HRJ47_05260 PF01476 LysM domain HRJ47_05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_05265 PF03466 LysR substrate binding domain HRJ47_05270 PF05362 Lon protease (S16) C-terminal proteolytic domain HRJ47_05270 PF13654 AAA domain HRJ47_05275 PF07690 Major Facilitator Superfamily HRJ47_05280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRJ47_05285 PF13593 SBF-like CPA transporter family (DUF4137) HRJ47_05290 PF01197 Ribosomal protein L31 HRJ47_05305 PF04055 Radical SAM superfamily HRJ47_05310 PF09285 Elongation factor P, C-terminal HRJ47_05310 PF01132 Elongation factor P (EF-P) OB domain HRJ47_05310 PF08207 Elongation factor P (EF-P) KOW-like domain HRJ47_05315 PF02554 Carbon starvation protein CstA HRJ47_05315 PF13722 5TM C-terminal transporter carbon starvation CstA HRJ47_05320 PF04328 Selenoprotein, putative HRJ47_05330 PF03466 LysR substrate binding domain HRJ47_05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_05335 PF02028 BCCT, betaine/carnitine/choline family transporter HRJ47_05340 PF00355 Rieske [2Fe-2S] domain HRJ47_05340 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HRJ47_05345 PF00171 Aldehyde dehydrogenase family HRJ47_05350 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_05350 PF18113 Rubredoxin binding C-terminal domain HRJ47_05355 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HRJ47_05355 PF01266 FAD dependent oxidoreductase HRJ47_05375 PF00892 EamA-like transporter family HRJ47_05385 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HRJ47_05410 PF02678 Pirin HRJ47_05410 PF17954 Quercetinase C-terminal cupin domain HRJ47_05420 PF00550 Phosphopantetheine attachment site HRJ47_05420 PF00501 AMP-binding enzyme HRJ47_05420 PF13193 AMP-binding enzyme C-terminal domain HRJ47_05420 PF00668 Condensation domain HRJ47_05430 PF00501 AMP-binding enzyme HRJ47_05430 PF00975 Thioesterase domain HRJ47_05430 PF13193 AMP-binding enzyme C-terminal domain HRJ47_05430 PF00668 Condensation domain HRJ47_05430 PF00550 Phosphopantetheine attachment site HRJ47_05435 PF01032 FecCD transport family HRJ47_05440 PF01032 FecCD transport family HRJ47_05445 PF00005 ABC transporter HRJ47_05450 PF01497 Periplasmic binding protein HRJ47_05455 PF00593 TonB dependent receptor HRJ47_05455 PF07715 TonB-dependent Receptor Plug Domain HRJ47_05460 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) HRJ47_05465 PF00550 Phosphopantetheine attachment site HRJ47_05465 PF00668 Condensation domain HRJ47_05465 PF00501 AMP-binding enzyme HRJ47_05470 PF00501 AMP-binding enzyme HRJ47_05470 PF13193 AMP-binding enzyme C-terminal domain HRJ47_05475 PF00550 Phosphopantetheine attachment site HRJ47_05475 PF00857 Isochorismatase family HRJ47_05480 PF00282 Pyridoxal-dependent decarboxylase conserved domain HRJ47_05490 PF00005 ABC transporter HRJ47_05495 PF00005 ABC transporter HRJ47_05500 PF00975 Thioesterase domain HRJ47_05505 PF01648 4'-phosphopantetheinyl transferase superfamily HRJ47_05505 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HRJ47_05510 PF00425 chorismate binding enzyme HRJ47_05525 PF01208 Uroporphyrinogen decarboxylase (URO-D) HRJ47_05530 PF05675 Protein of unknown function (DUF817) HRJ47_05545 PF00144 Beta-lactamase HRJ47_05550 PF01227 GTP cyclohydrolase I HRJ47_05555 PF00111 2Fe-2S iron-sulfur cluster binding domain HRJ47_05555 PF01799 [2Fe-2S] binding domain HRJ47_05560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HRJ47_05560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HRJ47_05575 PF00218 Indole-3-glycerol phosphate synthase HRJ47_05580 PF02885 Glycosyl transferase family, helical bundle domain HRJ47_05580 PF00591 Glycosyl transferase family, a/b domain HRJ47_05585 PF00117 Glutamine amidotransferase class-I HRJ47_05795 PF17891 Mu-like prophage FluMu N-terminal domain HRJ47_05795 PF12949 HeH/LEM domain HRJ47_05825 PF10548 P22AR C-terminal domain HRJ47_05825 PF08346 AntA/AntB antirepressor HRJ47_05940 PF13438 Domain of unknown function (DUF4113) HRJ47_05940 PF00817 impB/mucB/samB family HRJ47_05940 PF11799 impB/mucB/samB family C-terminal domain HRJ47_05945 PF00717 Peptidase S24-like HRJ47_05965 PF00589 Phage integrase family HRJ47_05965 PF13356 Arm DNA-binding domain HRJ47_05975 PF00854 POT family HRJ47_05980 PF00120 Glutamine synthetase, catalytic domain HRJ47_05980 PF03951 Glutamine synthetase, beta-Grasp domain HRJ47_05985 PF04345 Chorismate lyase HRJ47_05990 PF01040 UbiA prenyltransferase family HRJ47_06025 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HRJ47_06025 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HRJ47_06030 PF01784 NIF3 (NGG1p interacting factor 3) HRJ47_06035 PF13180 PDZ domain HRJ47_06040 PF12627 Probable RNA and SrmB- binding site of polymerase A HRJ47_06040 PF01743 Poly A polymerase head domain HRJ47_06045 PF03949 Malic enzyme, NAD binding domain HRJ47_06045 PF01515 Phosphate acetyl/butaryl transferase HRJ47_06045 PF00390 Malic enzyme, N-terminal domain HRJ47_06050 PF00563 EAL domain HRJ47_06050 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_06050 PF03707 Bacterial signalling protein N terminal repeat HRJ47_06055 PF04452 RNA methyltransferase HRJ47_06060 PF02219 Methylenetetrahydrofolate reductase HRJ47_06065 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HRJ47_06065 PF05221 S-adenosyl-L-homocysteine hydrolase HRJ47_06080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_06080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_06080 PF09317 Domain of unknown function (DUF1974) HRJ47_06080 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_06085 PF04055 Radical SAM superfamily HRJ47_06090 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_06090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRJ47_06100 PF07690 Major Facilitator Superfamily HRJ47_06115 PF00557 Metallopeptidase family M24 HRJ47_06120 PF00318 Ribosomal protein S2 HRJ47_06125 PF00889 Elongation factor TS HRJ47_06135 PF12833 Helix-turn-helix domain HRJ47_06155 PF05036 Sporulation related domain HRJ47_06155 PF03330 Lytic transglycolase HRJ47_06160 PF13406 Transglycosylase SLT domain HRJ47_06165 PF01098 Cell cycle protein HRJ47_06175 PF14489 QueF-like protein HRJ47_06175 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HRJ47_06180 PF01061 ABC-2 type transporter HRJ47_06185 PF00005 ABC transporter HRJ47_06190 PF00589 Phage integrase family HRJ47_06345 PF00149 Calcineurin-like phosphoesterase HRJ47_06385 PF03592 Terminase small subunit HRJ47_06580 PF00464 Serine hydroxymethyltransferase HRJ47_06585 PF02321 Outer membrane efflux protein HRJ47_06590 PF00873 AcrB/AcrD/AcrF family HRJ47_06595 PF13533 Biotin-lipoyl like HRJ47_06600 PF03466 LysR substrate binding domain HRJ47_06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_06605 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRJ47_06610 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_06615 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_06620 PF00005 ABC transporter HRJ47_06625 PF00893 Small Multidrug Resistance protein HRJ47_06630 PF00037 4Fe-4S binding domain HRJ47_06635 PF16325 Peptidase family U32 C-terminal domain HRJ47_06635 PF01136 Peptidase family U32 HRJ47_06640 PF00155 Aminotransferase class I and II HRJ47_06640 PF00392 Bacterial regulatory proteins, gntR family HRJ47_06645 PF02567 Phenazine biosynthesis-like protein HRJ47_06650 PF00970 Oxidoreductase FAD-binding domain HRJ47_06650 PF00175 Oxidoreductase NAD-binding domain HRJ47_06655 PF01980 tRNA-methyltransferase O HRJ47_06655 PF18389 TrmO C-terminal domain HRJ47_06665 PF00437 Type II/IV secretion system protein HRJ47_06665 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HRJ47_06675 PF00072 Response regulator receiver domain HRJ47_06675 PF00486 Transcriptional regulatory protein, C terminal HRJ47_06680 PF08521 Two-component sensor kinase N-terminal HRJ47_06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_06680 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_06690 PF00293 NUDIX domain HRJ47_06700 PF00912 Transglycosylase HRJ47_06700 PF14814 Bifunctional transglycosylase second domain HRJ47_06700 PF00905 Penicillin binding protein transpeptidase domain HRJ47_06705 PF01513 ATP-NAD kinase HRJ47_06710 PF07023 Protein of unknown function (DUF1315) HRJ47_06715 PF02885 Glycosyl transferase family, helical bundle domain HRJ47_06715 PF00591 Glycosyl transferase family, a/b domain HRJ47_06720 PF00375 Sodium:dicarboxylate symporter family HRJ47_06725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_06725 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_06725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_06740 PF00800 Prephenate dehydratase HRJ47_06740 PF01817 Chorismate mutase type II HRJ47_06740 PF01842 ACT domain HRJ47_06745 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRJ47_06755 PF01546 Peptidase family M20/M25/M40 HRJ47_06755 PF07687 Peptidase dimerisation domain HRJ47_06760 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain HRJ47_06760 PF01137 RNA 3'-terminal phosphate cyclase HRJ47_06775 PF01139 tRNA-splicing ligase RtcB HRJ47_06780 PF00753 Metallo-beta-lactamase superfamily HRJ47_06785 PF00158 Sigma-54 interaction domain HRJ47_06785 PF06956 Regulator of RNA terminal phosphate cyclase HRJ47_06795 PF03883 Peroxide stress protein YaaA HRJ47_06805 PF05690 Thiazole biosynthesis protein ThiG HRJ47_06815 PF04241 Protein of unknown function (DUF423) HRJ47_06820 PF00140 Sigma-70 factor, region 1.2 HRJ47_06820 PF04542 Sigma-70 region 2 HRJ47_06820 PF04545 Sigma-70, region 4 HRJ47_06830 PF00313 'Cold-shock' DNA-binding domain HRJ47_06835 PF00270 DEAD/DEAH box helicase HRJ47_06835 PF00271 Helicase conserved C-terminal domain HRJ47_06845 PF00881 Nitroreductase family HRJ47_06850 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HRJ47_06850 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HRJ47_06870 PF01180 Dihydroorotate dehydrogenase HRJ47_06875 PF02674 Colicin V production protein HRJ47_06880 PF00156 Phosphoribosyl transferase domain HRJ47_06895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRJ47_06895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRJ47_06900 PF01435 Peptidase family M48 HRJ47_06905 PF09424 Yqey-like protein HRJ47_06910 PF01165 Ribosomal protein S21 HRJ47_06915 PF00814 Glycoprotease family HRJ47_06935 PF03793 PASTA domain HRJ47_06935 PF00069 Protein kinase domain HRJ47_06960 PF00313 'Cold-shock' DNA-binding domain HRJ47_06975 PF00561 alpha/beta hydrolase fold HRJ47_06980 PF03616 Sodium/glutamate symporter HRJ47_06985 PF02254 TrkA-N domain HRJ47_06985 PF00999 Sodium/hydrogen exchanger family HRJ47_06995 PF00440 Bacterial regulatory proteins, tetR family HRJ47_07000 PF00155 Aminotransferase class I and II HRJ47_07005 PF02080 TrkA-C domain HRJ47_07005 PF06826 Predicted Permease Membrane Region HRJ47_07015 PF04403 Paraquat-inducible protein A HRJ47_07020 PF02470 MlaD protein HRJ47_07030 PF00576 HIUase/Transthyretin family HRJ47_07040 PF00072 Response regulator receiver domain HRJ47_07040 PF00486 Transcriptional regulatory protein, C terminal HRJ47_07045 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_07045 PF00672 HAMP domain HRJ47_07045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_07085 PF08521 Two-component sensor kinase N-terminal HRJ47_07085 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_07090 PF00486 Transcriptional regulatory protein, C terminal HRJ47_07090 PF00072 Response regulator receiver domain HRJ47_07105 PF01177 Asp/Glu/Hydantoin racemase HRJ47_07115 PF07995 Glucose / Sorbosone dehydrogenase HRJ47_07120 PF01494 FAD binding domain HRJ47_07125 PF07690 Major Facilitator Superfamily HRJ47_07130 PF03466 LysR substrate binding domain HRJ47_07130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_07150 PF00375 Sodium:dicarboxylate symporter family HRJ47_07160 PF00753 Metallo-beta-lactamase superfamily HRJ47_07160 PF16123 Hydroxyacylglutathione hydrolase C-terminus HRJ47_07165 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_07170 PF09383 NIL domain HRJ47_07170 PF00005 ABC transporter HRJ47_07175 PF03180 NLPA lipoprotein HRJ47_07180 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HRJ47_07180 PF02843 Phosphoribosylglycinamide synthetase, C domain HRJ47_07180 PF02844 Phosphoribosylglycinamide synthetase, N domain HRJ47_07185 PF02142 MGS-like domain HRJ47_07185 PF01808 AICARFT/IMPCHase bienzyme HRJ47_07190 PF02954 Bacterial regulatory protein, Fis family HRJ47_07210 PF01134 Glucose inhibited division protein A HRJ47_07210 PF13932 GidA associated domain HRJ47_07220 PF14403 Circularly permuted ATP-grasp type 2 HRJ47_07230 PF08379 Bacterial transglutaminase-like N-terminal region HRJ47_07230 PF01841 Transglutaminase-like superfamily HRJ47_07240 PF00842 Alanine racemase, C-terminal domain HRJ47_07240 PF01168 Alanine racemase, N-terminal domain HRJ47_07245 PF03796 DnaB-like helicase C terminal domain HRJ47_07245 PF00772 DnaB-like helicase N terminal domain HRJ47_07250 PF03948 Ribosomal protein L9, C-terminal domain HRJ47_07250 PF01281 Ribosomal protein L9, N-terminal domain HRJ47_07255 PF01084 Ribosomal protein S18 HRJ47_07260 PF01250 Ribosomal protein S6 HRJ47_07265 PF01040 UbiA prenyltransferase family HRJ47_07270 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HRJ47_07275 PF00510 Cytochrome c oxidase subunit III HRJ47_07280 PF00115 Cytochrome C and Quinol oxidase polypeptide I HRJ47_07285 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HRJ47_07285 PF06481 COX Aromatic Rich Motif HRJ47_07295 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HRJ47_07295 PF02896 PEP-utilising enzyme, TIM barrel domain HRJ47_07295 PF00391 PEP-utilising enzyme, mobile domain HRJ47_07300 PF03618 Kinase/pyrophosphorylase HRJ47_07310 PF01522 Polysaccharide deacetylase HRJ47_07310 PF14883 Hypothetical glycosyl hydrolase family 13 HRJ47_07315 PF00535 Glycosyl transferase family 2 HRJ47_07320 PF13994 PgaD-like protein HRJ47_07330 PF00296 Luciferase-like monooxygenase HRJ47_07345 PF03466 LysR substrate binding domain HRJ47_07345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_07355 PF03462 PCRF domain HRJ47_07355 PF00472 RF-1 domain HRJ47_07360 PF17827 PrmC N-terminal domain HRJ47_07360 PF13847 Methyltransferase domain HRJ47_07365 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_07370 PF09084 NMT1/THI5 like HRJ47_07380 PF00106 short chain dehydrogenase HRJ47_07385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_07385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_07385 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_07390 PF01613 Flavin reductase like domain HRJ47_07395 PF00899 ThiF family HRJ47_07400 PF03109 ABC1 family HRJ47_07405 PF02152 Dihydroneopterin aldolase HRJ47_07415 PF03814 Potassium-transporting ATPase A subunit HRJ47_07425 PF02669 K+-transporting ATPase, c chain HRJ47_07430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_07430 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_07430 PF13493 Domain of unknown function (DUF4118) HRJ47_07430 PF02702 Osmosensitive K+ channel His kinase sensor domain HRJ47_07435 PF00486 Transcriptional regulatory protein, C terminal HRJ47_07435 PF00072 Response regulator receiver domain HRJ47_07440 PF00120 Glutamine synthetase, catalytic domain HRJ47_07450 PF03232 Ubiquinone biosynthesis protein COQ7 HRJ47_07455 PF07690 Major Facilitator Superfamily HRJ47_07460 PF17243 POTRA domain TamA domain 1 HRJ47_07460 PF01103 Surface antigen HRJ47_07460 PF07244 Surface antigen variable number repeat HRJ47_07480 PF00330 Aconitase family (aconitate hydratase) HRJ47_07480 PF06434 Aconitate hydratase 2 N-terminus HRJ47_07480 PF11791 Aconitate B N-terminal domain HRJ47_07490 PF00027 Cyclic nucleotide-binding domain HRJ47_07490 PF00520 Ion transport protein HRJ47_07495 PF07690 Major Facilitator Superfamily HRJ47_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_07505 PF03466 LysR substrate binding domain HRJ47_07510 PF04284 Protein of unknown function (DUF441) HRJ47_07525 PF00849 RNA pseudouridylate synthase HRJ47_07525 PF01479 S4 domain HRJ47_07540 PF00849 RNA pseudouridylate synthase HRJ47_07540 PF01479 S4 domain HRJ47_07545 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HRJ47_07550 PF01119 DNA mismatch repair protein, C-terminal domain HRJ47_07550 PF08676 MutL C terminal dimerisation domain HRJ47_07560 PF17209 Hfq protein HRJ47_07570 PF00881 Nitroreductase family HRJ47_07580 PF00149 Calcineurin-like phosphoesterase HRJ47_07585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRJ47_07590 PF00749 tRNA synthetases class I (E and Q), catalytic domain HRJ47_07590 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HRJ47_07595 PF00117 Glutamine amidotransferase class-I HRJ47_07595 PF00958 GMP synthase C terminal domain HRJ47_07595 PF02540 NAD synthase HRJ47_07600 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HRJ47_07605 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HRJ47_07610 PF13520 Amino acid permease HRJ47_07615 PF00171 Aldehyde dehydrogenase family HRJ47_07630 PF00465 Iron-containing alcohol dehydrogenase HRJ47_07635 PF05970 PIF1-like helicase HRJ47_07635 PF14493 Helix-turn-helix domain HRJ47_07645 PF02110 Hydroxyethylthiazole kinase family HRJ47_07660 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HRJ47_07660 PF11940 Domain of unknown function (DUF3458) Ig-like fold HRJ47_07660 PF01433 Peptidase family M1 domain HRJ47_07675 PF13953 PapC C-terminal domain HRJ47_07675 PF13954 PapC N-terminal domain HRJ47_07675 PF00577 Outer membrane usher protein HRJ47_07700 PF01817 Chorismate mutase type II HRJ47_07715 PF07715 TonB-dependent Receptor Plug Domain HRJ47_07715 PF00593 TonB dependent receptor HRJ47_07715 PF07660 Secretin and TonB N terminus short domain HRJ47_07725 PF00117 Glutamine amidotransferase class-I HRJ47_07755 PF00959 Phage lysozyme HRJ47_07780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_07780 PF03466 LysR substrate binding domain HRJ47_07810 PF04151 Bacterial pre-peptidase C-terminal domain HRJ47_07815 PF12848 ABC transporter HRJ47_07815 PF00005 ABC transporter HRJ47_07820 PF00582 Universal stress protein family HRJ47_07840 PF03594 Benzoate membrane transport protein HRJ47_07845 PF01037 Lrp/AsnC ligand binding domain HRJ47_07850 PF01810 LysE type translocator HRJ47_07855 PF00923 Transaldolase/Fructose-6-phosphate aldolase HRJ47_07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_07860 PF03466 LysR substrate binding domain HRJ47_07870 PF00108 Thiolase, N-terminal domain HRJ47_07870 PF02803 Thiolase, C-terminal domain HRJ47_07880 PF01575 MaoC like domain HRJ47_07885 PF00144 Beta-lactamase HRJ47_07895 PF07690 Major Facilitator Superfamily HRJ47_07910 PF12170 DNA polymerase III tau subunit V interacting with alpha HRJ47_07910 PF12169 DNA polymerase III subunits gamma and tau domain III HRJ47_07910 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HRJ47_07920 PF05506 Domain of unknown function (DUF756) HRJ47_07920 PF04185 Phosphoesterase family HRJ47_07925 PF03061 Thioesterase superfamily HRJ47_07930 PF00465 Iron-containing alcohol dehydrogenase HRJ47_07945 PF00857 Isochorismatase family HRJ47_07950 PF01638 HxlR-like helix-turn-helix HRJ47_07960 PF01451 Low molecular weight phosphotyrosine protein phosphatase HRJ47_07965 PF01565 FAD binding domain HRJ47_07965 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HRJ47_07990 PF01645 Conserved region in glutamate synthase HRJ47_08005 PF00577 Outer membrane usher protein HRJ47_08005 PF13954 PapC N-terminal domain HRJ47_08005 PF13953 PapC C-terminal domain HRJ47_08020 PF12832 MFS_1 like family HRJ47_08030 PF00289 Biotin carboxylase, N-terminal domain HRJ47_08030 PF02785 Biotin carboxylase C-terminal domain HRJ47_08030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRJ47_08035 PF00364 Biotin-requiring enzyme HRJ47_08040 PF01220 Dehydroquinase class II HRJ47_08045 PF11799 impB/mucB/samB family C-terminal domain HRJ47_08045 PF13438 Domain of unknown function (DUF4113) HRJ47_08045 PF00817 impB/mucB/samB family HRJ47_08050 PF00593 TonB dependent receptor HRJ47_08050 PF07715 TonB-dependent Receptor Plug Domain HRJ47_08055 PF03328 HpcH/HpaI aldolase/citrate lyase family HRJ47_08060 PF06276 Ferric iron reductase FhuF-like transporter HRJ47_08060 PF04183 IucA / IucC family HRJ47_08065 PF07690 Major Facilitator Superfamily HRJ47_08070 PF04183 IucA / IucC family HRJ47_08070 PF06276 Ferric iron reductase FhuF-like transporter HRJ47_08075 PF02423 Ornithine cyclodeaminase/mu-crystallin family HRJ47_08080 PF00291 Pyridoxal-phosphate dependent enzyme HRJ47_08085 PF00005 ABC transporter HRJ47_08100 PF04324 BFD-like [2Fe-2S] binding domain HRJ47_08100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HRJ47_08100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HRJ47_08100 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_08100 PF13806 Rieske-like [2Fe-2S] domain HRJ47_08100 PF18267 Rubredoxin NAD+ reductase C-terminal domain HRJ47_08105 PF18267 Rubredoxin NAD+ reductase C-terminal domain HRJ47_08105 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_08105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HRJ47_08105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HRJ47_08105 PF04324 BFD-like [2Fe-2S] binding domain HRJ47_08110 PF01568 Molydopterin dinucleotide binding domain HRJ47_08110 PF00384 Molybdopterin oxidoreductase HRJ47_08110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRJ47_08110 PF04324 BFD-like [2Fe-2S] binding domain HRJ47_08115 PF12804 MobA-like NTP transferase domain HRJ47_08120 PF01568 Molydopterin dinucleotide binding domain HRJ47_08120 PF00384 Molybdopterin oxidoreductase HRJ47_08120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRJ47_08125 PF06463 Molybdenum Cofactor Synthesis C HRJ47_08125 PF04055 Radical SAM superfamily HRJ47_08135 PF02391 MoaE protein HRJ47_08140 PF01967 MoaC family HRJ47_08140 PF00994 Probable molybdopterin binding domain HRJ47_08145 PF03453 MoeA N-terminal region (domain I and II) HRJ47_08145 PF03454 MoeA C-terminal region (domain IV) HRJ47_08145 PF00994 Probable molybdopterin binding domain HRJ47_08150 PF01638 HxlR-like helix-turn-helix HRJ47_08155 PF00392 Bacterial regulatory proteins, gntR family HRJ47_08155 PF00155 Aminotransferase class I and II HRJ47_08160 PF00892 EamA-like transporter family HRJ47_08180 PF02635 DsrE/DsrF-like family HRJ47_08185 PF16363 GDP-mannose 4,6 dehydratase HRJ47_08190 PF00206 Lyase HRJ47_08190 PF10415 Fumarase C C-terminus HRJ47_08205 PF00561 alpha/beta hydrolase fold HRJ47_08225 PF01266 FAD dependent oxidoreductase HRJ47_08235 PF02542 YgbB family HRJ47_08245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRJ47_08245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRJ47_08250 PF00440 Bacterial regulatory proteins, tetR family HRJ47_08255 PF00072 Response regulator receiver domain HRJ47_08255 PF02954 Bacterial regulatory protein, Fis family HRJ47_08255 PF00158 Sigma-54 interaction domain HRJ47_08260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_08260 PF00989 PAS fold HRJ47_08260 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_08270 PF04055 Radical SAM superfamily HRJ47_08270 PF18693 TRAM domain HRJ47_08270 PF00919 Uncharacterized protein family UPF0004 HRJ47_08275 PF00696 Amino acid kinase family HRJ47_08280 PF01765 Ribosome recycling factor HRJ47_08285 PF01255 Putative undecaprenyl diphosphate synthase HRJ47_08295 PF13288 DXP reductoisomerase C-terminal domain HRJ47_08295 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HRJ47_08295 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HRJ47_08300 PF17820 PDZ domain HRJ47_08300 PF02163 Peptidase family M50 HRJ47_08300 PF13180 PDZ domain HRJ47_08305 PF01103 Surface antigen HRJ47_08305 PF07244 Surface antigen variable number repeat HRJ47_08315 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_08315 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HRJ47_08320 PF07977 FabA-like domain HRJ47_08325 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HRJ47_08325 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_08340 PF02631 RecX family HRJ47_08345 PF00154 recA bacterial DNA recombination protein HRJ47_08350 PF01479 S4 domain HRJ47_08355 PF13419 Haloacid dehalogenase-like hydrolase HRJ47_08370 PF01037 Lrp/AsnC ligand binding domain HRJ47_08375 PF00266 Aminotransferase class-V HRJ47_08380 PF00324 Amino acid permease HRJ47_08395 PF00082 Subtilase family HRJ47_08395 PF05922 Peptidase inhibitor I9 HRJ47_08400 PF01740 STAS domain HRJ47_08400 PF00916 Sulfate permease family HRJ47_08410 PF07995 Glucose / Sorbosone dehydrogenase HRJ47_08420 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_08420 PF00563 EAL domain HRJ47_08420 PF03707 Bacterial signalling protein N terminal repeat HRJ47_08435 PF02378 Phosphotransferase system, EIIC HRJ47_08435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRJ47_08440 PF00294 pfkB family carbohydrate kinase HRJ47_08445 PF00391 PEP-utilising enzyme, mobile domain HRJ47_08445 PF05524 PEP-utilising enzyme, N-terminal HRJ47_08445 PF00381 PTS HPr component phosphorylation site HRJ47_08445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRJ47_08445 PF02896 PEP-utilising enzyme, TIM barrel domain HRJ47_08465 PF03928 Haem-degrading HRJ47_08470 PF05525 Branched-chain amino acid transport protein HRJ47_08475 PF00557 Metallopeptidase family M24 HRJ47_08480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_08480 PF03466 LysR substrate binding domain HRJ47_08490 PF00462 Glutaredoxin HRJ47_08495 PF00202 Aminotransferase class-III HRJ47_08500 PF00571 CBS domain HRJ47_08500 PF00478 IMP dehydrogenase / GMP reductase domain HRJ47_08525 PF02881 SRP54-type protein, helical bundle domain HRJ47_08525 PF00448 SRP54-type protein, GTPase domain HRJ47_08545 PF08173 Membrane bound YbgT-like protein HRJ47_08550 PF02322 Cytochrome bd terminal oxidase subunit II HRJ47_08555 PF01654 Cytochrome bd terminal oxidase subunit I HRJ47_08565 PF07290 Protein of unknown function (DUF1449) HRJ47_08575 PF00294 pfkB family carbohydrate kinase HRJ47_08580 PF08367 Peptidase M16C associated HRJ47_08580 PF05193 Peptidase M16 inactive domain HRJ47_08580 PF00675 Insulinase (Peptidase family M16) HRJ47_08585 PF02253 Phospholipase A1 HRJ47_08590 PF02386 Cation transport protein HRJ47_08595 PF02254 TrkA-N domain HRJ47_08595 PF02080 TrkA-C domain HRJ47_08600 PF00291 Pyridoxal-phosphate dependent enzyme HRJ47_08600 PF00585 C-terminal regulatory domain of Threonine dehydratase HRJ47_08605 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HRJ47_08620 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRJ47_08620 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRJ47_08630 PF02617 ATP-dependent Clp protease adaptor protein ClpS HRJ47_08635 PF10431 C-terminal, D2-small domain, of ClpB protein HRJ47_08635 PF02861 Clp amino terminal domain, pathogenicity island component HRJ47_08635 PF17871 AAA lid domain HRJ47_08635 PF07724 AAA domain (Cdc48 subfamily) HRJ47_08635 PF00004 ATPase family associated with various cellular activities (AAA) HRJ47_08640 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HRJ47_08645 PF00793 DAHP synthetase I family HRJ47_08660 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_08660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRJ47_08690 PF00117 Glutamine amidotransferase class-I HRJ47_08690 PF06418 CTP synthase N-terminus HRJ47_08695 PF00793 DAHP synthetase I family HRJ47_08700 PF03952 Enolase, N-terminal domain HRJ47_08700 PF00113 Enolase, C-terminal TIM barrel domain HRJ47_08705 PF04239 Protein of unknown function (DUF421) HRJ47_08715 PF00593 TonB dependent receptor HRJ47_08715 PF07715 TonB-dependent Receptor Plug Domain HRJ47_08720 PF04977 Septum formation initiator HRJ47_08725 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HRJ47_08730 PF01144 Coenzyme A transferase HRJ47_08735 PF01144 Coenzyme A transferase HRJ47_08740 PF00108 Thiolase, N-terminal domain HRJ47_08740 PF02803 Thiolase, C-terminal domain HRJ47_08745 PF10397 Adenylosuccinate lyase C-terminus HRJ47_08745 PF00206 Lyase HRJ47_08750 PF00561 alpha/beta hydrolase fold HRJ47_08755 PF07690 Major Facilitator Superfamily HRJ47_08760 PF02627 Carboxymuconolactone decarboxylase family HRJ47_08765 PF00775 Dioxygenase HRJ47_08765 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal HRJ47_08770 PF00775 Dioxygenase HRJ47_08775 PF01487 Type I 3-dehydroquinase HRJ47_08780 PF05048 Periplasmic copper-binding protein (NosD) HRJ47_08785 PF04966 Carbohydrate-selective porin, OprB family HRJ47_08790 PF01011 PQQ enzyme repeat HRJ47_08790 PF13360 PQQ-like domain HRJ47_08800 PF04143 Sulphur transport HRJ47_08810 PF00753 Metallo-beta-lactamase superfamily HRJ47_08815 PF01614 Bacterial transcriptional regulator HRJ47_08815 PF09339 IclR helix-turn-helix domain HRJ47_08820 PF03466 LysR substrate binding domain HRJ47_08820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_08825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_08825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_08825 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_08840 PF00106 short chain dehydrogenase HRJ47_08850 PF07690 Major Facilitator Superfamily HRJ47_08860 PF01425 Amidase HRJ47_08865 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_08880 PF00355 Rieske [2Fe-2S] domain HRJ47_08880 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HRJ47_08895 PF00175 Oxidoreductase NAD-binding domain HRJ47_08895 PF00111 2Fe-2S iron-sulfur cluster binding domain HRJ47_08900 PF01613 Flavin reductase like domain HRJ47_08905 PF02311 AraC-like ligand binding domain HRJ47_08905 PF12833 Helix-turn-helix domain HRJ47_08910 PF01179 Copper amine oxidase, enzyme domain HRJ47_08910 PF02728 Copper amine oxidase, N3 domain HRJ47_08910 PF02727 Copper amine oxidase, N2 domain HRJ47_08910 PF07833 Copper amine oxidase N-terminal domain HRJ47_08920 PF00732 GMC oxidoreductase HRJ47_08920 PF05199 GMC oxidoreductase HRJ47_08925 PF00171 Aldehyde dehydrogenase family HRJ47_08930 PF12146 Serine aminopeptidase, S33 HRJ47_08935 PF02803 Thiolase, C-terminal domain HRJ47_08935 PF00108 Thiolase, N-terminal domain HRJ47_08940 PF01144 Coenzyme A transferase HRJ47_08945 PF01144 Coenzyme A transferase HRJ47_08950 PF04444 Catechol dioxygenase N terminus HRJ47_08950 PF00775 Dioxygenase HRJ47_08955 PF02426 Muconolactone delta-isomerase HRJ47_08960 PF13378 Enolase C-terminal domain-like HRJ47_08960 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HRJ47_08965 PF03466 LysR substrate binding domain HRJ47_08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_08975 PF00392 Bacterial regulatory proteins, gntR family HRJ47_08975 PF07729 FCD domain HRJ47_08980 PF00920 Dehydratase family HRJ47_08985 PF07690 Major Facilitator Superfamily HRJ47_08995 PF00171 Aldehyde dehydrogenase family HRJ47_09005 PF00576 HIUase/Transthyretin family HRJ47_09010 PF00860 Permease family HRJ47_09020 PF01494 FAD binding domain HRJ47_09025 PF07729 FCD domain HRJ47_09025 PF00392 Bacterial regulatory proteins, gntR family HRJ47_09035 PF09084 NMT1/THI5 like HRJ47_09040 PF00005 ABC transporter HRJ47_09045 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_09050 PF01979 Amidohydrolase family HRJ47_09060 PF00561 alpha/beta hydrolase fold HRJ47_09065 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_09065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRJ47_09070 PF00106 short chain dehydrogenase HRJ47_09075 PF01872 RibD C-terminal domain HRJ47_09080 PF00376 MerR family regulatory protein HRJ47_09080 PF09278 MerR, DNA binding HRJ47_09090 PF12706 Beta-lactamase superfamily domain HRJ47_09095 PF00440 Bacterial regulatory proteins, tetR family HRJ47_09095 PF08359 YsiA-like protein, C-terminal region HRJ47_09100 PF03466 LysR substrate binding domain HRJ47_09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_09115 PF00106 short chain dehydrogenase HRJ47_09120 PF01575 MaoC like domain HRJ47_09125 PF12806 Acetyl-CoA dehydrogenase C-terminal like HRJ47_09125 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_09125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_09125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_09135 PF00501 AMP-binding enzyme HRJ47_09135 PF13193 AMP-binding enzyme C-terminal domain HRJ47_09200 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) HRJ47_09235 PF03466 LysR substrate binding domain HRJ47_09235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_09255 PF07690 Major Facilitator Superfamily HRJ47_09260 PF01842 ACT domain HRJ47_09260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRJ47_09260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRJ47_09265 PF03737 Aldolase/RraA HRJ47_09280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_09280 PF03466 LysR substrate binding domain HRJ47_09285 PF00202 Aminotransferase class-III HRJ47_09290 PF00171 Aldehyde dehydrogenase family HRJ47_09295 PF00324 Amino acid permease HRJ47_09300 PF03466 LysR substrate binding domain HRJ47_09300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_09305 PF07883 Cupin domain HRJ47_09310 PF01494 FAD binding domain HRJ47_09315 PF13417 Glutathione S-transferase, N-terminal domain HRJ47_09320 PF01557 Fumarylacetoacetate (FAA) hydrolase family HRJ47_09325 PF07690 Major Facilitator Superfamily HRJ47_09335 PF13533 Biotin-lipoyl like HRJ47_09355 PF00313 'Cold-shock' DNA-binding domain HRJ47_09360 PF01638 HxlR-like helix-turn-helix HRJ47_09370 PF12833 Helix-turn-helix domain HRJ47_09370 PF06719 AraC-type transcriptional regulator N-terminus HRJ47_09375 PF00107 Zinc-binding dehydrogenase HRJ47_09375 PF08240 Alcohol dehydrogenase GroES-like domain HRJ47_09380 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_09380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRJ47_09400 PF02627 Carboxymuconolactone decarboxylase family HRJ47_09410 PF00085 Thioredoxin HRJ47_09415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRJ47_09440 PF01032 FecCD transport family HRJ47_09445 PF00005 ABC transporter HRJ47_09465 PF14572 Phosphoribosyl synthetase-associated domain HRJ47_09465 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HRJ47_09470 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HRJ47_09485 PF13533 Biotin-lipoyl like HRJ47_09490 PF07690 Major Facilitator Superfamily HRJ47_09515 PF01975 Survival protein SurE HRJ47_09525 PF02824 TGS domain HRJ47_09525 PF04607 Region found in RelA / SpoT proteins HRJ47_09525 PF13291 ACT domain HRJ47_09695 PF16970 Type-1 fimbrial protein, A HRJ47_09700 PF02753 Pili assembly chaperone PapD, C-terminal domain HRJ47_09700 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRJ47_09705 PF00577 Outer membrane usher protein HRJ47_09705 PF13954 PapC N-terminal domain HRJ47_09705 PF13953 PapC C-terminal domain HRJ47_09710 PF00419 Fimbrial protein HRJ47_09720 PF00107 Zinc-binding dehydrogenase HRJ47_09720 PF08240 Alcohol dehydrogenase GroES-like domain HRJ47_09730 PF00199 Catalase HRJ47_09750 PF13091 PLD-like domain HRJ47_09760 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_09760 PF00672 HAMP domain HRJ47_09760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_09765 PF00486 Transcriptional regulatory protein, C terminal HRJ47_09765 PF00072 Response regulator receiver domain HRJ47_09770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRJ47_09770 PF00529 HlyD membrane-fusion protein of T1SS HRJ47_09775 PF00873 AcrB/AcrD/AcrF family HRJ47_09790 PF01244 Membrane dipeptidase (Peptidase family M19) HRJ47_09795 PF04055 Radical SAM superfamily HRJ47_09795 PF13186 Iron-sulfur cluster-binding domain HRJ47_09800 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HRJ47_09805 PF03070 TENA/THI-4/PQQC family HRJ47_09810 PF12706 Beta-lactamase superfamily domain HRJ47_09815 PF08042 PqqA family HRJ47_09820 PF00149 Calcineurin-like phosphoesterase HRJ47_09830 PF00857 Isochorismatase family HRJ47_09830 PF00550 Phosphopantetheine attachment site HRJ47_09835 PF00106 short chain dehydrogenase HRJ47_09840 PF03459 TOBE domain HRJ47_09840 PF00005 ABC transporter HRJ47_09845 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_09855 PF03459 TOBE domain HRJ47_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_09860 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HRJ47_09860 PF00355 Rieske [2Fe-2S] domain HRJ47_09865 PF00866 Ring hydroxylating beta subunit HRJ47_09870 PF00111 2Fe-2S iron-sulfur cluster binding domain HRJ47_09870 PF00175 Oxidoreductase NAD-binding domain HRJ47_09870 PF00970 Oxidoreductase FAD-binding domain HRJ47_09880 PF14525 AraC-binding-like domain HRJ47_09880 PF12833 Helix-turn-helix domain HRJ47_09890 PF01613 Flavin reductase like domain HRJ47_09905 PF01738 Dienelactone hydrolase family HRJ47_09915 PF07690 Major Facilitator Superfamily HRJ47_09920 PF06719 AraC-type transcriptional regulator N-terminus HRJ47_09920 PF12833 Helix-turn-helix domain HRJ47_09970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_09970 PF03466 LysR substrate binding domain HRJ47_09975 PF01144 Coenzyme A transferase HRJ47_09980 PF01144 Coenzyme A transferase HRJ47_09985 PF02667 Short chain fatty acid transporter HRJ47_09990 PF00108 Thiolase, N-terminal domain HRJ47_09990 PF02803 Thiolase, C-terminal domain HRJ47_09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_09995 PF03466 LysR substrate binding domain HRJ47_10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_10000 PF03466 LysR substrate binding domain HRJ47_10015 PF00206 Lyase HRJ47_10015 PF10415 Fumarase C C-terminus HRJ47_10020 PF07715 TonB-dependent Receptor Plug Domain HRJ47_10020 PF00593 TonB dependent receptor HRJ47_10025 PF00083 Sugar (and other) transporter HRJ47_10035 PF02525 Flavodoxin-like fold HRJ47_10040 PF01638 HxlR-like helix-turn-helix HRJ47_10045 PF06445 GyrI-like small molecule binding domain HRJ47_10045 PF12833 Helix-turn-helix domain HRJ47_10060 PF01925 Sulfite exporter TauE/SafE HRJ47_10065 PF00753 Metallo-beta-lactamase superfamily HRJ47_10065 PF04273 Putative phosphatase (DUF442) HRJ47_10070 PF00753 Metallo-beta-lactamase superfamily HRJ47_10075 PF00158 Sigma-54 interaction domain HRJ47_10075 PF02954 Bacterial regulatory protein, Fis family HRJ47_10075 PF00072 Response regulator receiver domain HRJ47_10080 PF01062 Bestrophin, RFP-TM, chloride channel HRJ47_10085 PF00107 Zinc-binding dehydrogenase HRJ47_10085 PF08240 Alcohol dehydrogenase GroES-like domain HRJ47_10090 PF00106 short chain dehydrogenase HRJ47_10095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRJ47_10095 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_10100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HRJ47_10100 PF02817 e3 binding domain HRJ47_10100 PF00364 Biotin-requiring enzyme HRJ47_10105 PF02779 Transketolase, pyrimidine binding domain HRJ47_10105 PF02780 Transketolase, C-terminal domain HRJ47_10110 PF00676 Dehydrogenase E1 component HRJ47_10115 PF04055 Radical SAM superfamily HRJ47_10130 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_10130 PF08448 PAS fold HRJ47_10140 PF01264 Chorismate synthase HRJ47_10145 PF05175 Methyltransferase small domain HRJ47_10150 PF00291 Pyridoxal-phosphate dependent enzyme HRJ47_10160 PF01434 Peptidase family M41 HRJ47_10160 PF17862 AAA+ lid domain HRJ47_10160 PF00004 ATPase family associated with various cellular activities (AAA) HRJ47_10170 PF05166 YcgL domain HRJ47_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_10190 PF03466 LysR substrate binding domain HRJ47_10195 PF02525 Flavodoxin-like fold HRJ47_10200 PF01612 3'-5' exonuclease HRJ47_10200 PF00570 HRDC domain HRJ47_10215 PF13662 Toprim domain HRJ47_10215 PF02132 RecR protein HRJ47_10220 PF02575 YbaB/EbfC DNA-binding family HRJ47_10230 PF01053 Cys/Met metabolism PLP-dependent enzyme HRJ47_10235 PF00561 alpha/beta hydrolase fold HRJ47_10250 PF01230 HIT domain HRJ47_10275 PF02684 Lipid-A-disaccharide synthetase HRJ47_10280 PF00593 TonB dependent receptor HRJ47_10280 PF07715 TonB-dependent Receptor Plug Domain HRJ47_10305 PF01925 Sulfite exporter TauE/SafE HRJ47_10310 PF00793 DAHP synthetase I family HRJ47_10315 PF02654 Cobalamin-5-phosphate synthase HRJ47_10325 PF00300 Histidine phosphatase superfamily (branch 1) HRJ47_10330 PF02277 Phosphoribosyltransferase HRJ47_10335 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HRJ47_10345 PF13419 Haloacid dehalogenase-like hydrolase HRJ47_10350 PF00593 TonB dependent receptor HRJ47_10350 PF07715 TonB-dependent Receptor Plug Domain HRJ47_10355 PF04073 Aminoacyl-tRNA editing domain HRJ47_10365 PF03109 ABC1 family HRJ47_10370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_10370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_10370 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_10375 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_10375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_10375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_10380 PF00487 Fatty acid desaturase HRJ47_10385 PF12852 Cupin HRJ47_10385 PF12833 Helix-turn-helix domain HRJ47_10390 PF00639 PPIC-type PPIASE domain HRJ47_10390 PF09312 SurA N-terminal domain HRJ47_10395 PF00216 Bacterial DNA-binding protein HRJ47_10410 PF02082 Transcriptional regulator HRJ47_10415 PF00266 Aminotransferase class-V HRJ47_10420 PF01592 NifU-like N terminal domain HRJ47_10425 PF01521 Iron-sulphur cluster biosynthesis HRJ47_10430 PF07743 HSCB C-terminal oligomerisation domain HRJ47_10430 PF00226 DnaJ domain HRJ47_10435 PF00012 Hsp70 protein HRJ47_10440 PF00111 2Fe-2S iron-sulfur cluster binding domain HRJ47_10445 PF00211 Adenylate and Guanylate cyclase catalytic domain HRJ47_10455 PF17757 UvrB interaction domain HRJ47_10455 PF02559 CarD-like/TRCF domain HRJ47_10455 PF00270 DEAD/DEAH box helicase HRJ47_10455 PF00271 Helicase conserved C-terminal domain HRJ47_10455 PF03461 TRCF domain HRJ47_10475 PF03737 Aldolase/RraA HRJ47_10480 PF13460 NAD(P)H-binding HRJ47_10485 PF01649 Ribosomal protein S20 HRJ47_10495 PF00459 Inositol monophosphatase family HRJ47_10510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRJ47_10510 PF00005 ABC transporter HRJ47_10515 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_10515 PF12911 N-terminal TM domain of oligopeptide transport permease C HRJ47_10520 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_10525 PF01432 Peptidase family M3 HRJ47_10530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRJ47_10545 PF00593 TonB dependent receptor HRJ47_10545 PF07715 TonB-dependent Receptor Plug Domain HRJ47_10555 PF01618 MotA/TolQ/ExbB proton channel family HRJ47_10560 PF02472 Biopolymer transport protein ExbD/TolR HRJ47_10565 PF02472 Biopolymer transport protein ExbD/TolR HRJ47_10575 PF01274 Malate synthase HRJ47_10580 PF03969 AFG1-like ATPase HRJ47_10590 PF00743 Flavin-binding monooxygenase-like HRJ47_10595 PF03956 Lysine exporter LysO HRJ47_10600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HRJ47_10610 PF00216 Bacterial DNA-binding protein HRJ47_10615 PF00575 S1 RNA binding domain HRJ47_10620 PF02224 Cytidylate kinase HRJ47_10630 PF14437 MafB19-like deaminase HRJ47_10640 PF03167 Uracil DNA glycosylase superfamily HRJ47_10650 PF03934 Type II secretion system (T2SS), protein K HRJ47_10655 PF11612 Type II secretion system (T2SS), protein J HRJ47_10655 PF07963 Prokaryotic N-terminal methylation motif HRJ47_10660 PF02501 Type II secretion system (T2SS), protein I HRJ47_10660 PF07963 Prokaryotic N-terminal methylation motif HRJ47_10675 PF01026 TatD related DNase HRJ47_10685 PF09115 DNA polymerase III, delta subunit, C terminal HRJ47_10690 PF02348 Cytidylyltransferase HRJ47_10695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HRJ47_10700 PF00005 ABC transporter HRJ47_10700 PF00664 ABC transporter transmembrane region HRJ47_10710 PF01618 MotA/TolQ/ExbB proton channel family HRJ47_10715 PF17762 HTH domain found in ParB protein HRJ47_10715 PF02195 ParB-like nuclease domain HRJ47_10720 PF13614 AAA domain HRJ47_10725 PF02527 rRNA small subunit methyltransferase G HRJ47_10730 PF00483 Nucleotidyl transferase HRJ47_10735 PF01636 Phosphotransferase enzyme family HRJ47_10740 PF04453 LPS transport system D HRJ47_10740 PF03968 OstA-like protein HRJ47_10745 PF09312 SurA N-terminal domain HRJ47_10745 PF00639 PPIC-type PPIASE domain HRJ47_10750 PF01116 Fructose-bisphosphate aldolase class-II HRJ47_10760 PF00162 Phosphoglycerate kinase HRJ47_10770 PF02545 Maf-like protein HRJ47_10775 PF08007 Cupin superfamily protein HRJ47_10790 PF00375 Sodium:dicarboxylate symporter family HRJ47_10795 PF06912 Protein of unknown function (DUF1275) HRJ47_10800 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HRJ47_10805 PF00664 ABC transporter transmembrane region HRJ47_10805 PF00005 ABC transporter HRJ47_10815 PF12833 Helix-turn-helix domain HRJ47_10815 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HRJ47_10820 PF01597 Glycine cleavage H-protein HRJ47_10825 PF02146 Sir2 family HRJ47_10830 PF00474 Sodium:solute symporter family HRJ47_10835 PF01037 Lrp/AsnC ligand binding domain HRJ47_10840 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HRJ47_10840 PF14850 DNA-binding domain of Proline dehydrogenase HRJ47_10840 PF00171 Aldehyde dehydrogenase family HRJ47_10840 PF01619 Proline dehydrogenase HRJ47_10845 PF04229 GrpB protein HRJ47_10850 PF05958 tRNA (Uracil-5-)-methyltransferase HRJ47_10860 PF09992 Phosphodiester glycosidase HRJ47_10870 PF04264 YceI-like domain HRJ47_10880 PF00456 Transketolase, thiamine diphosphate binding domain HRJ47_10880 PF02780 Transketolase, C-terminal domain HRJ47_10880 PF02779 Transketolase, pyrimidine binding domain HRJ47_10885 PF00438 S-adenosylmethionine synthetase, N-terminal domain HRJ47_10885 PF02773 S-adenosylmethionine synthetase, C-terminal domain HRJ47_10885 PF02772 S-adenosylmethionine synthetase, central domain HRJ47_10905 PF00905 Penicillin binding protein transpeptidase domain HRJ47_10920 PF02075 Crossover junction endodeoxyribonuclease RuvC HRJ47_10925 PF01256 Carbohydrate kinase HRJ47_10925 PF03853 YjeF-related protein N-terminus HRJ47_10930 PF08331 Domain of unknown function (DUF1730) HRJ47_10935 PF06968 Biotin and Thiamin Synthesis associated domain HRJ47_10935 PF04055 Radical SAM superfamily HRJ47_10950 PF16970 Type-1 fimbrial protein, A HRJ47_10955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain HRJ47_10955 PF02753 Pili assembly chaperone PapD, C-terminal domain HRJ47_10960 PF13954 PapC N-terminal domain HRJ47_10960 PF00577 Outer membrane usher protein HRJ47_10960 PF13953 PapC C-terminal domain HRJ47_10965 PF00419 Fimbrial protein HRJ47_10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_10970 PF03466 LysR substrate binding domain HRJ47_10975 PF00892 EamA-like transporter family HRJ47_10985 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HRJ47_11005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_11005 PF03466 LysR substrate binding domain HRJ47_11020 PF00440 Bacterial regulatory proteins, tetR family HRJ47_11030 PF01709 Transcriptional regulator HRJ47_11035 PF01037 Lrp/AsnC ligand binding domain HRJ47_11045 PF00005 ABC transporter HRJ47_11050 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_11055 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_11070 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_11070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_11080 PF00296 Luciferase-like monooxygenase HRJ47_11085 PF03180 NLPA lipoprotein HRJ47_11090 PF03180 NLPA lipoprotein HRJ47_11095 PF09383 NIL domain HRJ47_11095 PF00005 ABC transporter HRJ47_11100 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_11105 PF06071 Protein of unknown function (DUF933) HRJ47_11105 PF01926 50S ribosome-binding GTPase HRJ47_11130 PF03591 AzlC protein HRJ47_11135 PF05437 Branched-chain amino acid transport protein (AzlD) HRJ47_11145 PF02222 ATP-grasp domain HRJ47_11150 PF01909 Nucleotidyltransferase domain HRJ47_11150 PF08335 GlnD PII-uridylyltransferase HRJ47_11150 PF01966 HD domain HRJ47_11155 PF00155 Aminotransferase class I and II HRJ47_11165 PF12833 Helix-turn-helix domain HRJ47_11165 PF02311 AraC-like ligand binding domain HRJ47_11170 PF00255 Glutathione peroxidase HRJ47_11175 PF01641 SelR domain HRJ47_11180 PF00155 Aminotransferase class I and II HRJ47_11185 PF00375 Sodium:dicarboxylate symporter family HRJ47_11190 PF00710 Asparaginase, N-terminal HRJ47_11190 PF17763 Glutaminase/Asparaginase C-terminal domain HRJ47_11195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HRJ47_11195 PF07733 Bacterial DNA polymerase III alpha NTPase domain HRJ47_11195 PF01336 OB-fold nucleic acid binding domain HRJ47_11195 PF02811 PHP domain HRJ47_11195 PF14579 Helix-hairpin-helix motif HRJ47_11200 PF00588 SpoU rRNA Methylase family HRJ47_11205 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_11220 PF13192 Thioredoxin domain HRJ47_11220 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_11235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_11235 PF03466 LysR substrate binding domain HRJ47_11240 PF03358 NADPH-dependent FMN reductase HRJ47_11245 PF01758 Sodium Bile acid symporter family HRJ47_11255 PF01022 Bacterial regulatory protein, arsR family HRJ47_11260 PF03960 ArsC family HRJ47_11270 PF01979 Amidohydrolase family HRJ47_11270 PF13382 Adenine deaminase C-terminal domain HRJ47_11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_11285 PF03466 LysR substrate binding domain HRJ47_11295 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HRJ47_11300 PF01177 Asp/Glu/Hydantoin racemase HRJ47_11305 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HRJ47_11310 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_11315 PF00005 ABC transporter HRJ47_11320 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HRJ47_11330 PF00083 Sugar (and other) transporter HRJ47_11335 PF00296 Luciferase-like monooxygenase HRJ47_11340 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_11340 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_11340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_11350 PF01654 Cytochrome bd terminal oxidase subunit I HRJ47_11355 PF02322 Cytochrome bd terminal oxidase subunit II HRJ47_11380 PF03466 LysR substrate binding domain HRJ47_11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_11395 PF00698 Acyl transferase domain HRJ47_11400 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG HRJ47_11410 PF01039 Carboxyl transferase domain HRJ47_11415 PF06857 Malonate decarboxylase delta subunit (MdcD) HRJ47_11420 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HRJ47_11425 PF16957 Malonate decarboxylase, alpha subunit, transporter HRJ47_11440 PF00392 Bacterial regulatory proteins, gntR family HRJ47_11440 PF00155 Aminotransferase class I and II HRJ47_11445 PF04172 LrgB-like family HRJ47_11450 PF03788 LrgA family HRJ47_11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_11455 PF03466 LysR substrate binding domain HRJ47_11460 PF14834 Glutathione S-transferase, C-terminal domain HRJ47_11460 PF02798 Glutathione S-transferase, N-terminal domain HRJ47_11465 PF02798 Glutathione S-transferase, N-terminal domain HRJ47_11470 PF03466 LysR substrate binding domain HRJ47_11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_11480 PF00581 Rhodanese-like domain HRJ47_11485 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_11495 PF00266 Aminotransferase class-V HRJ47_11500 PF01810 LysE type translocator HRJ47_11505 PF03466 LysR substrate binding domain HRJ47_11505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_11515 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRJ47_11520 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRJ47_11525 PF00005 ABC transporter HRJ47_11530 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_11535 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_11550 PF00072 Response regulator receiver domain HRJ47_11555 PF00072 Response regulator receiver domain HRJ47_11555 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_11555 PF09308 LuxQ, periplasmic HRJ47_11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_11565 PF01037 Lrp/AsnC ligand binding domain HRJ47_11565 PF13404 AsnC-type helix-turn-helix domain HRJ47_11575 PF00717 Peptidase S24-like HRJ47_11600 PF18011 C-terminal domain found in long catalases HRJ47_11600 PF06628 Catalase-related immune-responsive HRJ47_11600 PF00199 Catalase HRJ47_11650 PF07690 Major Facilitator Superfamily HRJ47_11665 PF00501 AMP-binding enzyme HRJ47_11665 PF13193 AMP-binding enzyme C-terminal domain HRJ47_11670 PF00440 Bacterial regulatory proteins, tetR family HRJ47_11675 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_11675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_11675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_11680 PF01039 Carboxyl transferase domain HRJ47_11685 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_11690 PF18140 Propionyl-coenzyme A carboxylase BT domain HRJ47_11690 PF00364 Biotin-requiring enzyme HRJ47_11690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRJ47_11690 PF02785 Biotin carboxylase C-terminal domain HRJ47_11690 PF00289 Biotin carboxylase, N-terminal domain HRJ47_11695 PF00682 HMGL-like HRJ47_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_11700 PF03466 LysR substrate binding domain HRJ47_11715 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_11715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_11715 PF12806 Acetyl-CoA dehydrogenase C-terminal like HRJ47_11715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_11735 PF01144 Coenzyme A transferase HRJ47_11740 PF01144 Coenzyme A transferase HRJ47_11745 PF07690 Major Facilitator Superfamily HRJ47_11750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_11750 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_11750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_11755 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_11765 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HRJ47_11765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HRJ47_11765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HRJ47_11770 PF02803 Thiolase, C-terminal domain HRJ47_11770 PF00108 Thiolase, N-terminal domain HRJ47_11775 PF09339 IclR helix-turn-helix domain HRJ47_11780 PF07690 Major Facilitator Superfamily HRJ47_11785 PF03060 Nitronate monooxygenase HRJ47_11790 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_11795 PF09339 IclR helix-turn-helix domain HRJ47_11800 PF02515 CoA-transferase family III HRJ47_11805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_11805 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_11805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_11810 PF07690 Major Facilitator Superfamily HRJ47_11815 PF13419 Haloacid dehalogenase-like hydrolase HRJ47_11820 PF00266 Aminotransferase class-V HRJ47_11825 PF01266 FAD dependent oxidoreductase HRJ47_11830 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_11835 PF08402 TOBE domain HRJ47_11835 PF00005 ABC transporter HRJ47_11845 PF07702 UTRA domain HRJ47_11845 PF00392 Bacterial regulatory proteins, gntR family HRJ47_11850 PF01168 Alanine racemase, N-terminal domain HRJ47_11850 PF00842 Alanine racemase, C-terminal domain HRJ47_11855 PF01494 FAD binding domain HRJ47_11860 PF09339 IclR helix-turn-helix domain HRJ47_11860 PF01614 Bacterial transcriptional regulator HRJ47_11880 PF03061 Thioesterase superfamily HRJ47_11885 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_11890 PF08223 PaaX-like protein C-terminal domain HRJ47_11890 PF07848 PaaX-like protein HRJ47_11895 PF00501 AMP-binding enzyme HRJ47_11895 PF14535 AMP-binding enzyme C-terminal domain HRJ47_11900 PF02803 Thiolase, C-terminal domain HRJ47_11900 PF00108 Thiolase, N-terminal domain HRJ47_11905 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain HRJ47_11905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HRJ47_11905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HRJ47_11910 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_11915 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_11920 PF00175 Oxidoreductase NAD-binding domain HRJ47_11920 PF00111 2Fe-2S iron-sulfur cluster binding domain HRJ47_11920 PF00970 Oxidoreductase FAD-binding domain HRJ47_11925 PF01883 Iron-sulfur cluster assembly protein HRJ47_11930 PF05138 Phenylacetic acid catabolic protein HRJ47_11935 PF06243 Phenylacetic acid degradation B HRJ47_11940 PF05138 Phenylacetic acid catabolic protein HRJ47_11945 PF01575 MaoC like domain HRJ47_11945 PF00171 Aldehyde dehydrogenase family HRJ47_11950 PF03313 Serine dehydratase alpha chain HRJ47_11950 PF03315 Serine dehydratase beta chain HRJ47_11965 PF09278 MerR, DNA binding HRJ47_11965 PF00376 MerR family regulatory protein HRJ47_11975 PF02677 Epoxyqueuosine reductase QueH HRJ47_11980 PF00392 Bacterial regulatory proteins, gntR family HRJ47_11980 PF00155 Aminotransferase class I and II HRJ47_11995 PF07690 Major Facilitator Superfamily HRJ47_12000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HRJ47_12005 PF12796 Ankyrin repeats (3 copies) HRJ47_12010 PF03466 LysR substrate binding domain HRJ47_12010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_12030 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE HRJ47_12035 PF06812 ImpA, N-terminal, type VI secretion system HRJ47_12040 PF07724 AAA domain (Cdc48 subfamily) HRJ47_12040 PF10431 C-terminal, D2-small domain, of ClpB protein HRJ47_12040 PF00004 ATPase family associated with various cellular activities (AAA) HRJ47_12040 PF17871 AAA lid domain HRJ47_12050 PF18393 MotY N-terminal domain HRJ47_12050 PF00691 OmpA family HRJ47_12060 PF06744 Type VI secretion protein IcmF C-terminal HRJ47_12060 PF14331 ImcF-related N-terminal domain HRJ47_12060 PF06761 Intracellular multiplication and human macrophage-killing HRJ47_12075 PF05947 Type VI secretion system, TssF HRJ47_12100 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath HRJ47_12150 PF13296 Putative type VI secretion system Rhs element Vgr HRJ47_12150 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) HRJ47_12150 PF04717 Type VI secretion system, phage-baseplate injector HRJ47_12170 PF04717 Type VI secretion system, phage-baseplate injector HRJ47_12170 PF13296 Putative type VI secretion system Rhs element Vgr HRJ47_12170 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) HRJ47_12185 PF00005 ABC transporter HRJ47_12190 PF00497 Bacterial extracellular solute-binding proteins, family 3 HRJ47_12195 PF01425 Amidase HRJ47_12200 PF01402 Ribbon-helix-helix protein, copG family HRJ47_12200 PF08753 NikR C terminal nickel binding domain HRJ47_12210 PF01638 HxlR-like helix-turn-helix HRJ47_12215 PF02525 Flavodoxin-like fold HRJ47_12220 PF02785 Biotin carboxylase C-terminal domain HRJ47_12220 PF00289 Biotin carboxylase, N-terminal domain HRJ47_12220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRJ47_12235 PF13823 Alcohol dehydrogenase GroES-associated HRJ47_12235 PF08240 Alcohol dehydrogenase GroES-like domain HRJ47_12235 PF00107 Zinc-binding dehydrogenase HRJ47_12240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HRJ47_12240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HRJ47_12245 PF00892 EamA-like transporter family HRJ47_12285 PF17287 POTRA domain HRJ47_12285 PF08479 POTRA domain, ShlB-type HRJ47_12285 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB HRJ47_12290 PF00654 Voltage gated chloride channel HRJ47_12295 PF02785 Biotin carboxylase C-terminal domain HRJ47_12295 PF00289 Biotin carboxylase, N-terminal domain HRJ47_12295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRJ47_12295 PF00364 Biotin-requiring enzyme HRJ47_12305 PF07286 Protein of unknown function (DUF1445) HRJ47_12310 PF03746 LamB/YcsF family HRJ47_12315 PF01566 Natural resistance-associated macrophage protein HRJ47_12320 PF03466 LysR substrate binding domain HRJ47_12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_12330 PF04542 Sigma-70 region 2 HRJ47_12330 PF08281 Sigma-70, region 4 HRJ47_12340 PF05114 Protein of unknown function (DUF692) HRJ47_12415 PF03797 Autotransporter beta-domain HRJ47_12415 PF12951 Passenger-associated-transport-repeat HRJ47_12415 PF00082 Subtilase family HRJ47_12420 PF03707 Bacterial signalling protein N terminal repeat HRJ47_12420 PF00563 EAL domain HRJ47_12420 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_12445 PF07690 Major Facilitator Superfamily HRJ47_12455 PF01292 Prokaryotic cytochrome b561 HRJ47_12460 PF00199 Catalase HRJ47_12475 PF06719 AraC-type transcriptional regulator N-terminus HRJ47_12475 PF12833 Helix-turn-helix domain HRJ47_12495 PF00313 'Cold-shock' DNA-binding domain HRJ47_12525 PF00892 EamA-like transporter family HRJ47_12530 PF01037 Lrp/AsnC ligand binding domain HRJ47_12535 PF13520 Amino acid permease HRJ47_12540 PF01636 Phosphotransferase enzyme family HRJ47_12550 PF12833 Helix-turn-helix domain HRJ47_12550 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HRJ47_12555 PF00202 Aminotransferase class-III HRJ47_12560 PF00488 MutS domain V HRJ47_12560 PF05190 MutS family domain IV HRJ47_12560 PF05192 MutS domain III HRJ47_12560 PF05188 MutS domain II HRJ47_12560 PF01624 MutS domain I HRJ47_12570 PF00037 4Fe-4S binding domain HRJ47_12570 PF11953 Domain of unknown function (DUF3470) HRJ47_12580 PF01596 O-methyltransferase HRJ47_12590 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_12595 PF01205 Uncharacterized protein family UPF0029 HRJ47_12600 PF13533 Biotin-lipoyl like HRJ47_12605 PF00664 ABC transporter transmembrane region HRJ47_12605 PF03412 Peptidase C39 family HRJ47_12605 PF00005 ABC transporter HRJ47_12610 PF02321 Outer membrane efflux protein HRJ47_12615 PF12399 Branched-chain amino acid ATP-binding cassette transporter HRJ47_12615 PF00005 ABC transporter HRJ47_12620 PF03968 OstA-like protein HRJ47_12635 PF01380 SIS domain HRJ47_12635 PF00571 CBS domain HRJ47_12640 PF01406 tRNA synthetases class I (C) catalytic domain HRJ47_12640 PF09190 DALR domain HRJ47_12675 PF01638 HxlR-like helix-turn-helix HRJ47_12680 PF07690 Major Facilitator Superfamily HRJ47_12690 PF00924 Mechanosensitive ion channel HRJ47_12735 PF00440 Bacterial regulatory proteins, tetR family HRJ47_12745 PF08241 Methyltransferase domain HRJ47_12750 PF13419 Haloacid dehalogenase-like hydrolase HRJ47_12755 PF01037 Lrp/AsnC ligand binding domain HRJ47_12765 PF03807 NADP oxidoreductase coenzyme F420-dependent HRJ47_12765 PF14748 Pyrroline-5-carboxylate reductase dimerisation HRJ47_12775 PF00313 'Cold-shock' DNA-binding domain HRJ47_12780 PF03279 Bacterial lipid A biosynthesis acyltransferase HRJ47_12785 PF01810 LysE type translocator HRJ47_12820 PF02601 Exonuclease VII, large subunit HRJ47_12820 PF13742 OB-fold nucleic acid binding domain HRJ47_12855 PF09278 MerR, DNA binding HRJ47_12855 PF00376 MerR family regulatory protein HRJ47_12860 PF00403 Heavy-metal-associated domain HRJ47_12865 PF00403 Heavy-metal-associated domain HRJ47_12870 PF06505 Activator of aromatic catabolism HRJ47_12870 PF02830 V4R domain HRJ47_12870 PF00158 Sigma-54 interaction domain HRJ47_12870 PF02954 Bacterial regulatory protein, Fis family HRJ47_12880 PF06099 Phenol hydroxylase subunit HRJ47_12885 PF02332 Methane/Phenol/Toluene Hydroxylase HRJ47_12890 PF02406 MmoB/DmpM family HRJ47_12895 PF02332 Methane/Phenol/Toluene Hydroxylase HRJ47_12895 PF04945 YHS domain HRJ47_12905 PF00970 Oxidoreductase FAD-binding domain HRJ47_12905 PF00111 2Fe-2S iron-sulfur cluster binding domain HRJ47_12905 PF00175 Oxidoreductase NAD-binding domain HRJ47_12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_12915 PF03466 LysR substrate binding domain HRJ47_12925 PF00355 Rieske [2Fe-2S] domain HRJ47_12925 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HRJ47_12930 PF00866 Ring hydroxylating beta subunit HRJ47_12935 PF00970 Oxidoreductase FAD-binding domain HRJ47_12935 PF00175 Oxidoreductase NAD-binding domain HRJ47_12935 PF00111 2Fe-2S iron-sulfur cluster binding domain HRJ47_12940 PF00106 short chain dehydrogenase HRJ47_12945 PF03594 Benzoate membrane transport protein HRJ47_12950 PF07690 Major Facilitator Superfamily HRJ47_12960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HRJ47_12960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HRJ47_12965 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HRJ47_12965 PF00271 Helicase conserved C-terminal domain HRJ47_12965 PF04408 Helicase associated domain (HA2) HRJ47_12965 PF11898 Domain of unknown function (DUF3418) HRJ47_12965 PF00270 DEAD/DEAH box helicase HRJ47_12970 PF00578 AhpC/TSA family HRJ47_12970 PF10417 C-terminal domain of 1-Cys peroxiredoxin HRJ47_12990 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_12990 PF13192 Thioredoxin domain HRJ47_13000 PF00043 Glutathione S-transferase, C-terminal domain HRJ47_13000 PF02798 Glutathione S-transferase, N-terminal domain HRJ47_13010 PF02390 Putative methyltransferase HRJ47_13020 PF00043 Glutathione S-transferase, C-terminal domain HRJ47_13020 PF13417 Glutathione S-transferase, N-terminal domain HRJ47_13030 PF00691 OmpA family HRJ47_13030 PF13488 Glycine zipper HRJ47_13035 PF01979 Amidohydrolase family HRJ47_13040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRJ47_13040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRJ47_13050 PF10672 S-adenosylmethionine-dependent methyltransferase HRJ47_13050 PF02926 THUMP domain HRJ47_13050 PF01170 Putative RNA methylase family UPF0020 HRJ47_13065 PF10431 C-terminal, D2-small domain, of ClpB protein HRJ47_13065 PF00004 ATPase family associated with various cellular activities (AAA) HRJ47_13065 PF07724 AAA domain (Cdc48 subfamily) HRJ47_13065 PF17871 AAA lid domain HRJ47_13065 PF02861 Clp amino terminal domain, pathogenicity island component HRJ47_13080 PF02566 OsmC-like protein HRJ47_13090 PF13545 Crp-like helix-turn-helix domain HRJ47_13090 PF00027 Cyclic nucleotide-binding domain HRJ47_13095 PF00248 Aldo/keto reductase family HRJ47_13110 PF00709 Adenylosuccinate synthetase HRJ47_13115 PF13393 Histidyl-tRNA synthetase HRJ47_13120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRJ47_13120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRJ47_13125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRJ47_13125 PF02272 DHHA1 domain HRJ47_13125 PF01411 tRNA synthetases class II (A) HRJ47_13130 PF01842 ACT domain HRJ47_13130 PF00696 Amino acid kinase family HRJ47_13130 PF13840 ACT domain HRJ47_13135 PF02599 Global regulator protein family HRJ47_13140 PF01351 Ribonuclease HII HRJ47_13150 PF01292 Prokaryotic cytochrome b561 HRJ47_13155 PF00962 Adenosine/AMP deaminase HRJ47_13160 PF00860 Permease family HRJ47_13170 PF02678 Pirin HRJ47_13170 PF17954 Quercetinase C-terminal cupin domain HRJ47_13175 PF00440 Bacterial regulatory proteins, tetR family HRJ47_13175 PF17932 Tetracyclin repressor-like, C-terminal domain HRJ47_13185 PF00106 short chain dehydrogenase HRJ47_13190 PF00743 Flavin-binding monooxygenase-like HRJ47_13195 PF04072 Leucine carboxyl methyltransferase HRJ47_13200 PF03466 LysR substrate binding domain HRJ47_13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_13205 PF07690 Major Facilitator Superfamily HRJ47_13210 PF05681 Fumarate hydratase (Fumerase) HRJ47_13215 PF05683 Fumarase C-terminus HRJ47_13220 PF12833 Helix-turn-helix domain HRJ47_13220 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HRJ47_13225 PF00743 Flavin-binding monooxygenase-like HRJ47_13230 PF00106 short chain dehydrogenase HRJ47_13235 PF07859 alpha/beta hydrolase fold HRJ47_13240 PF05199 GMC oxidoreductase HRJ47_13245 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HRJ47_13245 PF18381 YcaO cyclodehydratase C-terminal domain HRJ47_13255 PF07690 Major Facilitator Superfamily HRJ47_13260 PF00884 Sulfatase HRJ47_13265 PF03781 Sulfatase-modifying factor enzyme 1 HRJ47_13275 PF00355 Rieske [2Fe-2S] domain HRJ47_13280 PF00175 Oxidoreductase NAD-binding domain HRJ47_13280 PF00111 2Fe-2S iron-sulfur cluster binding domain HRJ47_13295 PF07690 Major Facilitator Superfamily HRJ47_13300 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_13305 PF00171 Aldehyde dehydrogenase family HRJ47_13315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_13315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_13315 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_13320 PF03573 outer membrane porin, OprD family HRJ47_13335 PF07519 Tannase and feruloyl esterase HRJ47_13340 PF00892 EamA-like transporter family HRJ47_13345 PF12833 Helix-turn-helix domain HRJ47_13345 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HRJ47_13350 PF00171 Aldehyde dehydrogenase family HRJ47_13360 PF00324 Amino acid permease HRJ47_13365 PF04958 Arginine N-succinyltransferase beta subunit HRJ47_13370 PF00202 Aminotransferase class-III HRJ47_13380 PF00171 Aldehyde dehydrogenase family HRJ47_13390 PF07729 FCD domain HRJ47_13390 PF00392 Bacterial regulatory proteins, gntR family HRJ47_13400 PF00324 Amino acid permease HRJ47_13405 PF01266 FAD dependent oxidoreductase HRJ47_13410 PF00324 Amino acid permease HRJ47_13420 PF05643 Putative bacterial lipoprotein (DUF799) HRJ47_13430 PF03783 Curli production assembly/transport component CsgG HRJ47_13445 PF05987 Bacterial protein of unknown function (DUF898) HRJ47_13465 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_13465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRJ47_13475 PF00764 Arginosuccinate synthase HRJ47_13480 PF01590 GAF domain HRJ47_13480 PF00360 Phytochrome region HRJ47_13480 PF00563 EAL domain HRJ47_13480 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_13485 PF01979 Amidohydrolase family HRJ47_13490 PF00929 Exonuclease HRJ47_13500 PF00593 TonB dependent receptor HRJ47_13500 PF07715 TonB-dependent Receptor Plug Domain HRJ47_13505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRJ47_13505 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_13510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRJ47_13510 PF00005 ABC transporter HRJ47_13515 PF12911 N-terminal TM domain of oligopeptide transport permease C HRJ47_13515 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_13520 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_13525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HRJ47_13530 PF01464 Transglycosylase SLT domain HRJ47_13530 PF01476 LysM domain HRJ47_13530 PF01464 Transglycosylase SLT domain HRJ47_13530 PF01476 LysM domain HRJ47_13535 PF00929 Exonuclease HRJ47_13545 PF00293 NUDIX domain HRJ47_13545 PF09297 NADH pyrophosphatase zinc ribbon domain HRJ47_13555 PF04972 BON domain HRJ47_13560 PF02021 Uncharacterised protein family UPF0102 HRJ47_13565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRJ47_13575 PF03466 LysR substrate binding domain HRJ47_13575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_13580 PF01810 LysE type translocator HRJ47_13590 PF13411 MerR HTH family regulatory protein HRJ47_13600 PF01494 FAD binding domain HRJ47_13605 PF01494 FAD binding domain HRJ47_13610 PF05195 Aminopeptidase P, N-terminal domain HRJ47_13610 PF00557 Metallopeptidase family M24 HRJ47_13650 PF01812 5-formyltetrahydrofolate cyclo-ligase family HRJ47_13655 PF00004 ATPase family associated with various cellular activities (AAA) HRJ47_13655 PF02190 ATP-dependent protease La (LON) substrate-binding domain HRJ47_13655 PF05362 Lon protease (S16) C-terminal proteolytic domain HRJ47_13660 PF02590 Predicted SPOUT methyltransferase HRJ47_13665 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HRJ47_13675 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HRJ47_13675 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HRJ47_13680 PF04060 Putative Fe-S cluster HRJ47_13685 PF10576 Iron-sulfur binding domain of endonuclease III HRJ47_13685 PF00730 HhH-GPD superfamily base excision DNA repair protein HRJ47_13685 PF00633 Helix-hairpin-helix motif HRJ47_13695 PF05191 Adenylate kinase, active site lid HRJ47_13710 PF03717 Penicillin-binding Protein dimerisation domain HRJ47_13710 PF00905 Penicillin binding protein transpeptidase domain HRJ47_13725 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRJ47_13730 PF01730 UreF HRJ47_13735 PF05194 UreE urease accessory protein, C-terminal domain HRJ47_13735 PF02814 UreE urease accessory protein, N-terminal domain HRJ47_13740 PF01979 Amidohydrolase family HRJ47_13740 PF00449 Urease alpha-subunit, N-terminal domain HRJ47_13745 PF00699 Urease beta subunit HRJ47_13750 PF00547 Urease, gamma subunit HRJ47_13755 PF01774 UreD urease accessory protein HRJ47_13765 PF04170 NlpE N-terminal domain HRJ47_13765 PF17185 NlpE C-terminal OB domain HRJ47_13770 PF00463 Isocitrate lyase family HRJ47_13775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_13775 PF03466 LysR substrate binding domain HRJ47_13780 PF00571 CBS domain HRJ47_13780 PF03471 Transporter associated domain HRJ47_13780 PF01595 Cyclin M transmembrane N-terminal domain HRJ47_13785 PF03600 Citrate transporter HRJ47_13800 PF00009 Elongation factor Tu GTP binding domain HRJ47_13805 PF01507 Phosphoadenosine phosphosulfate reductase family HRJ47_13815 PF14052 Capsule assembly protein Wzi HRJ47_13820 PF00152 tRNA synthetases class II (D, K and N) HRJ47_13820 PF01336 OB-fold nucleic acid binding domain HRJ47_13835 PF00301 Rubredoxin HRJ47_13840 PF18113 Rubredoxin binding C-terminal domain HRJ47_13840 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_13845 PF00561 alpha/beta hydrolase fold HRJ47_13850 PF03466 LysR substrate binding domain HRJ47_13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_13865 PF17941 Polyphosphate kinase C-terminal domain 1 HRJ47_13865 PF13089 Polyphosphate kinase N-terminal domain HRJ47_13865 PF02503 Polyphosphate kinase middle domain HRJ47_13865 PF13090 Polyphosphate kinase C-terminal domain 2 HRJ47_13870 PF00912 Transglycosylase HRJ47_13875 PF01694 Rhomboid family HRJ47_13885 PF00005 ABC transporter HRJ47_13890 PF13472 GDSL-like Lipase/Acylhydrolase family HRJ47_13895 PF00484 Carbonic anhydrase HRJ47_13900 PF00561 alpha/beta hydrolase fold HRJ47_13910 PF00593 TonB dependent receptor HRJ47_13910 PF07715 TonB-dependent Receptor Plug Domain HRJ47_13915 PF01106 NifU-like domain HRJ47_13915 PF01521 Iron-sulphur cluster biosynthesis HRJ47_13925 PF00884 Sulfatase HRJ47_13930 PF03781 Sulfatase-modifying factor enzyme 1 HRJ47_13945 PF00291 Pyridoxal-phosphate dependent enzyme HRJ47_13950 PF01384 Phosphate transporter family HRJ47_13955 PF02965 Vitamin B12 dependent methionine synthase, activation domain HRJ47_13955 PF02310 B12 binding domain HRJ47_13955 PF00809 Pterin binding enzyme HRJ47_13955 PF02574 Homocysteine S-methyltransferase HRJ47_13955 PF02607 B12 binding domain HRJ47_13960 PF02779 Transketolase, pyrimidine binding domain HRJ47_13960 PF02780 Transketolase, C-terminal domain HRJ47_13965 PF00456 Transketolase, thiamine diphosphate binding domain HRJ47_13970 PF07690 Major Facilitator Superfamily HRJ47_13980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_13980 PF03466 LysR substrate binding domain HRJ47_13990 PF01263 Aldose 1-epimerase HRJ47_13995 PF07690 Major Facilitator Superfamily HRJ47_14000 PF12833 Helix-turn-helix domain HRJ47_14000 PF02311 AraC-like ligand binding domain HRJ47_14005 PF04960 Glutaminase HRJ47_14010 PF01327 Polypeptide deformylase HRJ47_14015 PF07690 Major Facilitator Superfamily HRJ47_14025 PF00205 Thiamine pyrophosphate enzyme, central domain HRJ47_14025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRJ47_14025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRJ47_14030 PF00171 Aldehyde dehydrogenase family HRJ47_14035 PF01958 Domain of unknown function DUF108 HRJ47_14035 PF03447 Homoserine dehydrogenase, NAD binding domain HRJ47_14045 PF12697 Alpha/beta hydrolase family HRJ47_14055 PF07690 Major Facilitator Superfamily HRJ47_14060 PF14759 Reductase C-terminal HRJ47_14060 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_14065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRJ47_14075 PF00355 Rieske [2Fe-2S] domain HRJ47_14085 PF00355 Rieske [2Fe-2S] domain HRJ47_14090 PF09339 IclR helix-turn-helix domain HRJ47_14090 PF01614 Bacterial transcriptional regulator HRJ47_14115 PF00535 Glycosyl transferase family 2 HRJ47_14120 PF14883 Hypothetical glycosyl hydrolase family 13 HRJ47_14120 PF01522 Polysaccharide deacetylase HRJ47_14125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRJ47_14130 PF07152 YaeQ protein HRJ47_14135 PF00375 Sodium:dicarboxylate symporter family HRJ47_14140 PF02492 CobW/HypB/UreG, nucleotide-binding domain HRJ47_14140 PF07683 Cobalamin synthesis protein cobW C-terminal domain HRJ47_14150 PF03061 Thioesterase superfamily HRJ47_14160 PF02028 BCCT, betaine/carnitine/choline family transporter HRJ47_14165 PF02028 BCCT, betaine/carnitine/choline family transporter HRJ47_14170 PF13977 BetI-type transcriptional repressor, C-terminal HRJ47_14170 PF00440 Bacterial regulatory proteins, tetR family HRJ47_14175 PF00171 Aldehyde dehydrogenase family HRJ47_14180 PF05199 GMC oxidoreductase HRJ47_14180 PF00732 GMC oxidoreductase HRJ47_14185 PF06039 Malate:quinone oxidoreductase (Mqo) HRJ47_14195 PF02574 Homocysteine S-methyltransferase HRJ47_14200 PF13520 Amino acid permease HRJ47_14225 PF01126 Heme oxygenase HRJ47_14235 PF04575 Protein of unknown function (DUF560) HRJ47_14245 PF07715 TonB-dependent Receptor Plug Domain HRJ47_14245 PF00593 TonB dependent receptor HRJ47_14255 PF04542 Sigma-70 region 2 HRJ47_14255 PF08281 Sigma-70, region 4 HRJ47_14265 PF00701 Dihydrodipicolinate synthetase family HRJ47_14270 PF00083 Sugar (and other) transporter HRJ47_14320 PF00717 Peptidase S24-like HRJ47_14325 PF00817 impB/mucB/samB family HRJ47_14325 PF11799 impB/mucB/samB family C-terminal domain HRJ47_14325 PF11798 IMS family HHH motif HRJ47_14325 PF13438 Domain of unknown function (DUF4113) HRJ47_14400 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HRJ47_14550 PF07007 Lysozyme inhibitor LprI HRJ47_14595 PF01695 IstB-like ATP binding protein HRJ47_14605 PF00145 C-5 cytosine-specific DNA methylase HRJ47_14690 PF00929 Exonuclease HRJ47_14765 PF07690 Major Facilitator Superfamily HRJ47_14770 PF13533 Biotin-lipoyl like HRJ47_14775 PF03061 Thioesterase superfamily HRJ47_14780 PF00490 Delta-aminolevulinic acid dehydratase HRJ47_14785 PF01266 FAD dependent oxidoreductase HRJ47_14790 PF08338 Domain of unknown function (DUF1731) HRJ47_14790 PF01370 NAD dependent epimerase/dehydratase family HRJ47_14810 PF00149 Calcineurin-like phosphoesterase HRJ47_14810 PF12320 Type 5 capsule protein repressor C-terminal domain HRJ47_14820 PF01168 Alanine racemase, N-terminal domain HRJ47_14825 PF00437 Type II/IV secretion system protein HRJ47_14830 PF00437 Type II/IV secretion system protein HRJ47_14835 PF01475 Ferric uptake regulator family HRJ47_14840 PF04355 SmpA / OmlA family HRJ47_14845 PF03658 RnfH family Ubiquitin HRJ47_14855 PF01814 Hemerythrin HHE cation binding domain HRJ47_14860 PF13230 Glutamine amidotransferases class-II HRJ47_14870 PF00696 Amino acid kinase family HRJ47_14875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRJ47_14875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRJ47_14875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRJ47_14875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRJ47_14880 PF00692 dUTPase HRJ47_14885 PF13361 UvrD-like helicase C-terminal domain HRJ47_14885 PF00580 UvrD/REP helicase N-terminal domain HRJ47_14890 PF13488 Glycine zipper HRJ47_14890 PF00691 OmpA family HRJ47_14895 PF01553 Acyltransferase HRJ47_14905 PF03775 Septum formation inhibitor MinC, C-terminal domain HRJ47_14910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HRJ47_14915 PF03776 Septum formation topological specificity factor MinE HRJ47_14925 PF01810 LysE type translocator HRJ47_14930 PF09397 Ftsk gamma domain HRJ47_14930 PF17854 FtsK alpha domain HRJ47_14930 PF01580 FtsK/SpoIIIE family HRJ47_14930 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HRJ47_14935 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_14940 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HRJ47_14945 PF04376 Arginine-tRNA-protein transferase, N terminus HRJ47_14945 PF04377 Arginine-tRNA-protein transferase, C terminus HRJ47_14950 PF00583 Acetyltransferase (GNAT) family HRJ47_14965 PF03144 Elongation factor Tu domain 2 HRJ47_14965 PF00009 Elongation factor Tu GTP binding domain HRJ47_14965 PF03143 Elongation factor Tu C-terminal domain HRJ47_14970 PF00679 Elongation factor G C-terminus HRJ47_14970 PF14492 Elongation Factor G, domain II HRJ47_14970 PF03764 Elongation factor G, domain IV HRJ47_14970 PF03144 Elongation factor Tu domain 2 HRJ47_14970 PF00009 Elongation factor Tu GTP binding domain HRJ47_14975 PF00177 Ribosomal protein S7p/S5e HRJ47_14980 PF00164 Ribosomal protein S12/S23 HRJ47_14990 PF02801 Beta-ketoacyl synthase, C-terminal domain HRJ47_14990 PF00109 Beta-ketoacyl synthase, N-terminal domain HRJ47_14995 PF03653 Uncharacterised protein family (UPF0093) HRJ47_15005 PF00795 Carbon-nitrogen hydrolase HRJ47_15005 PF02540 NAD synthase HRJ47_15020 PF00970 Oxidoreductase FAD-binding domain HRJ47_15020 PF00111 2Fe-2S iron-sulfur cluster binding domain HRJ47_15020 PF00175 Oxidoreductase NAD-binding domain HRJ47_15025 PF00171 Aldehyde dehydrogenase family HRJ47_15030 PF00355 Rieske [2Fe-2S] domain HRJ47_15030 PF00848 Ring hydroxylating alpha subunit (catalytic domain) HRJ47_15035 PF07859 alpha/beta hydrolase fold HRJ47_15040 PF02028 BCCT, betaine/carnitine/choline family transporter HRJ47_15045 PF00180 Isocitrate/isopropylmalate dehydrogenase HRJ47_15050 PF03466 LysR substrate binding domain HRJ47_15050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_15070 PF00037 4Fe-4S binding domain HRJ47_15075 PF01467 Cytidylyltransferase-like HRJ47_15080 PF01668 SmpB protein HRJ47_15085 PF03358 NADPH-dependent FMN reductase HRJ47_15090 PF02578 Multi-copper polyphenol oxidoreductase laccase HRJ47_15095 PF01479 S4 domain HRJ47_15095 PF00849 RNA pseudouridylate synthase HRJ47_15100 PF13525 Outer membrane lipoprotein HRJ47_15105 PF10410 DnaB-helicase binding domain of primase HRJ47_15105 PF08278 DNA primase DnaG DnaB-binding HRJ47_15105 PF08275 DNA primase catalytic core, N-terminal domain HRJ47_15105 PF01807 CHC2 zinc finger HRJ47_15110 PF01488 Shikimate / quinate 5-dehydrogenase HRJ47_15110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HRJ47_15110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HRJ47_15120 PF03550 Outer membrane lipoprotein LolB HRJ47_15125 PF00288 GHMP kinases N terminal domain HRJ47_15125 PF08544 GHMP kinases C terminal HRJ47_15150 PF14572 Phosphoribosyl synthetase-associated domain HRJ47_15150 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HRJ47_15155 PF01386 Ribosomal L25p family HRJ47_15160 PF01195 Peptidyl-tRNA hydrolase HRJ47_15165 PF02261 Aspartate decarboxylase HRJ47_15180 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HRJ47_15190 PF08543 Phosphomethylpyrimidine kinase HRJ47_15190 PF03070 TENA/THI-4/PQQC family HRJ47_15190 PF02581 Thiamine monophosphate synthase HRJ47_15195 PF01476 LysM domain HRJ47_15195 PF04972 BON domain HRJ47_15200 PF00550 Phosphopantetheine attachment site HRJ47_15210 PF00698 Acyl transferase domain HRJ47_15215 PF01783 Ribosomal L32p protein family HRJ47_15220 PF02620 Large ribosomal RNA subunit accumulation protein YceD HRJ47_15225 PF04315 Elongation factor P hydroxylase HRJ47_15230 PF01300 Telomere recombination HRJ47_15235 PF02616 Segregation and condensation protein ScpA HRJ47_15240 PF04079 Segregation and condensation complex subunit ScpB HRJ47_15245 PF01479 S4 domain HRJ47_15245 PF00849 RNA pseudouridylate synthase HRJ47_15260 PF00155 Aminotransferase class I and II HRJ47_15265 PF06968 Biotin and Thiamin Synthesis associated domain HRJ47_15265 PF04055 Radical SAM superfamily HRJ47_15265 PF00202 Aminotransferase class-III HRJ47_15270 PF08241 Methyltransferase domain HRJ47_15270 PF12697 Alpha/beta hydrolase family HRJ47_15275 PF02358 Trehalose-phosphatase HRJ47_15280 PF00982 Glycosyltransferase family 20 HRJ47_15285 PF07690 Major Facilitator Superfamily HRJ47_15290 PF00210 Ferritin-like domain HRJ47_15295 PF03120 NAD-dependent DNA ligase OB-fold domain HRJ47_15295 PF12826 Helix-hairpin-helix motif HRJ47_15295 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HRJ47_15295 PF01653 NAD-dependent DNA ligase adenylation domain HRJ47_15295 PF00533 BRCA1 C Terminus (BRCT) domain HRJ47_15305 PF06470 SMC proteins Flexible Hinge Domain HRJ47_15305 PF02463 RecF/RecN/SMC N terminal domain HRJ47_15315 PF01925 Sulfite exporter TauE/SafE HRJ47_15325 PF03309 Type III pantothenate kinase HRJ47_15330 PF02978 Signal peptide binding domain HRJ47_15330 PF00448 SRP54-type protein, GTPase domain HRJ47_15330 PF02881 SRP54-type protein, helical bundle domain HRJ47_15340 PF01207 Dihydrouridine synthase (Dus) HRJ47_15370 PF00692 dUTPase HRJ47_15385 PF01048 Phosphorylase superfamily HRJ47_15390 PF10609 NUBPL iron-transfer P-loop NTPase HRJ47_15400 PF01588 Putative tRNA binding domain HRJ47_15400 PF09334 tRNA synthetases class I (M) HRJ47_15430 PF13533 Biotin-lipoyl like HRJ47_15435 PF00291 Pyridoxal-phosphate dependent enzyme HRJ47_15450 PF05552 Conserved TM helix HRJ47_15465 PF00970 Oxidoreductase FAD-binding domain HRJ47_15465 PF00175 Oxidoreductase NAD-binding domain HRJ47_15470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_15470 PF03466 LysR substrate binding domain HRJ47_15485 PF00361 Proton-conducting membrane transporter HRJ47_15490 PF00361 Proton-conducting membrane transporter HRJ47_15495 PF00361 Proton-conducting membrane transporter HRJ47_15495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HRJ47_15500 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HRJ47_15505 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HRJ47_15510 PF12838 4Fe-4S dicluster domain HRJ47_15515 PF00146 NADH dehydrogenase HRJ47_15520 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HRJ47_15520 PF00384 Molybdopterin oxidoreductase HRJ47_15520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HRJ47_15525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HRJ47_15525 PF10531 SLBB domain HRJ47_15525 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HRJ47_15535 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HRJ47_15535 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HRJ47_15540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HRJ47_15545 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HRJ47_15550 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_15560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_15560 PF00672 HAMP domain HRJ47_15560 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_15565 PF00072 Response regulator receiver domain HRJ47_15565 PF00486 Transcriptional regulatory protein, C terminal HRJ47_15570 PF03477 ATP cone domain HRJ47_15570 PF02867 Ribonucleotide reductase, barrel domain HRJ47_15570 PF00317 Ribonucleotide reductase, all-alpha domain HRJ47_15580 PF00268 Ribonucleotide reductase, small chain HRJ47_15605 PF17074 Darcynin, domain of unknown function HRJ47_15625 PF01613 Flavin reductase like domain HRJ47_15630 PF01717 Cobalamin-independent synthase, Catalytic domain HRJ47_15630 PF08267 Cobalamin-independent synthase, N-terminal domain HRJ47_15640 PF03466 LysR substrate binding domain HRJ47_15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_15645 PF01810 LysE type translocator HRJ47_15655 PF12833 Helix-turn-helix domain HRJ47_15655 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HRJ47_15660 PF01546 Peptidase family M20/M25/M40 HRJ47_15660 PF07687 Peptidase dimerisation domain HRJ47_15680 PF01970 Tripartite tricarboxylate transporter TctA family HRJ47_15695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_15695 PF03466 LysR substrate binding domain HRJ47_15700 PF07690 Major Facilitator Superfamily HRJ47_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_15710 PF03466 LysR substrate binding domain HRJ47_15715 PF00890 FAD binding domain HRJ47_15715 PF14537 Cytochrome c3 HRJ47_15730 PF00440 Bacterial regulatory proteins, tetR family HRJ47_15730 PF17932 Tetracyclin repressor-like, C-terminal domain HRJ47_15740 PF02515 CoA-transferase family III HRJ47_15745 PF07690 Major Facilitator Superfamily HRJ47_15750 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_15750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_15750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_15755 PF03466 LysR substrate binding domain HRJ47_15755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_15760 PF00107 Zinc-binding dehydrogenase HRJ47_15760 PF08240 Alcohol dehydrogenase GroES-like domain HRJ47_15765 PF00962 Adenosine/AMP deaminase HRJ47_15790 PF02445 Quinolinate synthetase A protein HRJ47_15795 PF01960 ArgJ family HRJ47_15800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HRJ47_15800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRJ47_15805 PF00893 Small Multidrug Resistance protein HRJ47_15820 PF00394 Multicopper oxidase HRJ47_15820 PF07732 Multicopper oxidase HRJ47_15820 PF07731 Multicopper oxidase HRJ47_15835 PF00834 Ribulose-phosphate 3 epimerase family HRJ47_15845 PF00756 Putative esterase HRJ47_15855 PF04445 Putative SAM-dependent methyltransferase HRJ47_15860 PF00814 Glycoprotease family HRJ47_15865 PF00132 Bacterial transferase hexapeptide (six repeats) HRJ47_15870 PF00293 NUDIX domain HRJ47_15910 PF00425 chorismate binding enzyme HRJ47_15910 PF04715 Anthranilate synthase component I, N terminal region HRJ47_15915 PF00155 Aminotransferase class I and II HRJ47_15920 PF00815 Histidinol dehydrogenase HRJ47_15925 PF01634 ATP phosphoribosyltransferase HRJ47_15930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRJ47_15935 PF01722 BolA-like protein HRJ47_15940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HRJ47_15945 PF00309 Sigma-54 factor, Activator interacting domain (AID) HRJ47_15945 PF04552 Sigma-54, DNA binding domain HRJ47_15945 PF04963 Sigma-54 factor, core binding domain HRJ47_15990 PF00795 Carbon-nitrogen hydrolase HRJ47_16000 PF01047 MarR family HRJ47_16005 PF02566 OsmC-like protein HRJ47_16010 PF00437 Type II/IV secretion system protein HRJ47_16030 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HRJ47_16030 PF01367 5'-3' exonuclease, C-terminal SAM fold HRJ47_16030 PF01612 3'-5' exonuclease HRJ47_16030 PF00476 DNA polymerase family A HRJ47_16035 PF02325 YGGT family HRJ47_16040 PF03807 NADP oxidoreductase coenzyme F420-dependent HRJ47_16040 PF14748 Pyrroline-5-carboxylate reductase dimerisation HRJ47_16045 PF01171 PP-loop family HRJ47_16045 PF11734 TilS substrate C-terminal domain HRJ47_16045 PF09179 TilS substrate binding domain HRJ47_16050 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HRJ47_16055 PF02541 Ppx/GppA phosphatase family HRJ47_16060 PF00085 Thioredoxin HRJ47_16065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRJ47_16065 PF07498 Rho termination factor, N-terminal domain HRJ47_16065 PF07497 Rho termination factor, RNA-binding domain HRJ47_16080 PF00216 Bacterial DNA-binding protein HRJ47_16085 PF01588 Putative tRNA binding domain HRJ47_16085 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HRJ47_16085 PF03147 Ferredoxin-fold anticodon binding domain HRJ47_16085 PF03484 tRNA synthetase B5 domain HRJ47_16085 PF03483 B3/4 domain HRJ47_16090 PF01409 tRNA synthetases class II core domain (F) HRJ47_16090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HRJ47_16100 PF00453 Ribosomal protein L20 HRJ47_16105 PF01632 Ribosomal protein L35 HRJ47_16115 PF07690 Major Facilitator Superfamily HRJ47_16120 PF09335 SNARE associated Golgi protein HRJ47_16125 PF02798 Glutathione S-transferase, N-terminal domain HRJ47_16125 PF00043 Glutathione S-transferase, C-terminal domain HRJ47_16130 PF00707 Translation initiation factor IF-3, C-terminal domain HRJ47_16130 PF05198 Translation initiation factor IF-3, N-terminal domain HRJ47_16135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRJ47_16135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRJ47_16135 PF03129 Anticodon binding domain HRJ47_16135 PF02824 TGS domain HRJ47_16140 PF13193 AMP-binding enzyme C-terminal domain HRJ47_16140 PF00501 AMP-binding enzyme HRJ47_16145 PF04751 Protein of unknown function (DUF615) HRJ47_16150 PF00381 PTS HPr component phosphorylation site HRJ47_16155 PF03668 P-loop ATPase protein family HRJ47_16160 PF02569 Pantoate-beta-alanine ligase HRJ47_16165 PF02548 Ketopantoate hydroxymethyltransferase HRJ47_16170 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HRJ47_16175 PF01743 Poly A polymerase head domain HRJ47_16175 PF12627 Probable RNA and SrmB- binding site of polymerase A HRJ47_16175 PF12626 Polymerase A arginine-rich C-terminus HRJ47_16185 PF03819 MazG nucleotide pyrophosphohydrolase domain HRJ47_16190 PF00106 short chain dehydrogenase HRJ47_16215 PF02824 TGS domain HRJ47_16215 PF04607 Region found in RelA / SpoT proteins HRJ47_16215 PF13291 ACT domain HRJ47_16220 PF05958 tRNA (Uracil-5-)-methyltransferase HRJ47_16230 PF00291 Pyridoxal-phosphate dependent enzyme HRJ47_16235 PF00072 Response regulator receiver domain HRJ47_16235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_16235 PF01627 Hpt domain HRJ47_16235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HRJ47_16235 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_16235 PF00672 HAMP domain HRJ47_16240 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_16245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HRJ47_16245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HRJ47_16250 PF01261 Xylose isomerase-like TIM barrel HRJ47_16260 PF00106 short chain dehydrogenase HRJ47_16265 PF02233 NAD(P) transhydrogenase beta subunit HRJ47_16270 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HRJ47_16275 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HRJ47_16275 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HRJ47_16280 PF00892 EamA-like transporter family HRJ47_16290 PF07690 Major Facilitator Superfamily HRJ47_16320 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_16325 PF03358 NADPH-dependent FMN reductase HRJ47_16330 PF01758 Sodium Bile acid symporter family HRJ47_16340 PF01022 Bacterial regulatory protein, arsR family HRJ47_16345 PF03960 ArsC family HRJ47_16355 PF07664 Ferrous iron transport protein B C terminus HRJ47_16355 PF07670 Nucleoside recognition HRJ47_16355 PF02421 Ferrous iron transport protein B HRJ47_16370 PF00893 Small Multidrug Resistance protein HRJ47_16440 PF00589 Phage integrase family HRJ47_16455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_16455 PF03466 LysR substrate binding domain HRJ47_16465 PF00899 ThiF family HRJ47_16470 PF00330 Aconitase family (aconitate hydratase) HRJ47_16470 PF00694 Aconitase C-terminal domain HRJ47_16475 PF01026 TatD related DNase HRJ47_16490 PF00009 Elongation factor Tu GTP binding domain HRJ47_16490 PF03144 Elongation factor Tu domain 2 HRJ47_16490 PF16658 Class II release factor RF3, C-terminal domain HRJ47_16505 PF00990 Diguanylate cyclase, GGDEF domain HRJ47_16505 PF03707 Bacterial signalling protein N terminal repeat HRJ47_16505 PF00563 EAL domain HRJ47_16510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HRJ47_16510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HRJ47_16515 PF10369 Small subunit of acetolactate synthase HRJ47_16520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRJ47_16520 PF00205 Thiamine pyrophosphate enzyme, central domain HRJ47_16520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRJ47_16525 PF13603 Leucyl-tRNA synthetase, Domain 2 HRJ47_16525 PF09334 tRNA synthetases class I (M) HRJ47_16525 PF00133 tRNA synthetases class I (I, L, M and V) HRJ47_16525 PF08264 Anticodon-binding domain of tRNA HRJ47_16540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HRJ47_16545 PF02687 FtsX-like permease family HRJ47_16545 PF12704 MacB-like periplasmic core domain HRJ47_16545 PF00005 ABC transporter HRJ47_16550 PF02321 Outer membrane efflux protein HRJ47_16565 PF00929 Exonuclease HRJ47_16570 PF03193 RsgA GTPase HRJ47_16580 PF00462 Glutaredoxin HRJ47_16585 PF02556 Preprotein translocase subunit SecB HRJ47_16595 PF01926 50S ribosome-binding GTPase HRJ47_16595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HRJ47_16600 PF13360 PQQ-like domain HRJ47_16600 PF01011 PQQ enzyme repeat HRJ47_16610 PF03129 Anticodon binding domain HRJ47_16610 PF13393 Histidyl-tRNA synthetase HRJ47_16615 PF04551 GcpE protein HRJ47_16620 PF13464 Domain of unknown function (DUF4115) HRJ47_16630 PF04055 Radical SAM superfamily HRJ47_16635 PF00334 Nucleoside diphosphate kinase HRJ47_16640 PF04384 Iron-sulphur cluster assembly HRJ47_16645 PF01569 PAP2 superfamily HRJ47_16650 PF00534 Glycosyl transferases group 1 HRJ47_16650 PF13439 Glycosyltransferase Family 4 HRJ47_16655 PF17804 Tail specific protease N-terminal domain HRJ47_16655 PF11818 C-terminal domain of tail specific protease (DUF3340) HRJ47_16655 PF00595 PDZ domain HRJ47_16655 PF03572 Peptidase family S41 HRJ47_16660 PF00933 Glycosyl hydrolase family 3 N terminal domain HRJ47_16670 PF00561 alpha/beta hydrolase fold HRJ47_16675 PF00171 Aldehyde dehydrogenase family HRJ47_16680 PF00171 Aldehyde dehydrogenase family HRJ47_16685 PF01202 Shikimate kinase HRJ47_16690 PF02447 GntP family permease HRJ47_16695 PF01081 KDPG and KHG aldolase HRJ47_16700 PF00920 Dehydratase family HRJ47_16710 PF00871 Acetokinase family HRJ47_16715 PF01515 Phosphate acetyl/butaryl transferase HRJ47_16715 PF07085 DRTGG domain HRJ47_16720 PF05683 Fumarase C-terminus HRJ47_16720 PF05681 Fumarate hydratase (Fumerase) HRJ47_16735 PF07724 AAA domain (Cdc48 subfamily) HRJ47_16735 PF10431 C-terminal, D2-small domain, of ClpB protein HRJ47_16735 PF06689 ClpX C4-type zinc finger HRJ47_16740 PF00574 Clp protease HRJ47_16745 PF05697 Bacterial trigger factor protein (TF) HRJ47_16745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRJ47_16745 PF05698 Bacterial trigger factor protein (TF) C-terminus HRJ47_16750 PF00593 TonB dependent receptor HRJ47_16750 PF07715 TonB-dependent Receptor Plug Domain HRJ47_16755 PF13640 2OG-Fe(II) oxygenase superfamily HRJ47_16755 PF18331 PKHD-type hydroxylase C-terminal domain HRJ47_16760 PF08502 LeuA allosteric (dimerisation) domain HRJ47_16760 PF00682 HMGL-like HRJ47_16765 PF00561 alpha/beta hydrolase fold HRJ47_16770 PF07021 Methionine biosynthesis protein MetW HRJ47_16770 PF00561 alpha/beta hydrolase fold HRJ47_16780 PF01725 Ham1 family HRJ47_16790 PF02416 mttA/Hcf106 family HRJ47_16795 PF02416 mttA/Hcf106 family HRJ47_16800 PF00902 Sec-independent protein translocase protein (TatC) HRJ47_16820 PF01790 Prolipoprotein diacylglyceryl transferase HRJ47_16835 PF00303 Thymidylate synthase HRJ47_16840 PF00186 Dihydrofolate reductase HRJ47_16850 PF01625 Peptide methionine sulfoxide reductase HRJ47_16860 PF01618 MotA/TolQ/ExbB proton channel family HRJ47_16870 PF01842 ACT domain HRJ47_16870 PF00551 Formyl transferase HRJ47_16880 PF00171 Aldehyde dehydrogenase family HRJ47_16885 PF00830 Ribosomal L28 family HRJ47_16890 PF00471 Ribosomal protein L33 HRJ47_16895 PF02254 TrkA-N domain HRJ47_16895 PF00999 Sodium/hydrogen exchanger family HRJ47_16915 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HRJ47_16920 PF13361 UvrD-like helicase C-terminal domain HRJ47_16920 PF00580 UvrD/REP helicase N-terminal domain HRJ47_16935 PF08272 Topoisomerase I zinc-ribbon-like HRJ47_16935 PF01396 Topoisomerase DNA binding C4 zinc finger HRJ47_16935 PF01751 Toprim domain HRJ47_16935 PF01131 DNA topoisomerase HRJ47_16945 PF01638 HxlR-like helix-turn-helix HRJ47_16950 PF00107 Zinc-binding dehydrogenase HRJ47_16950 PF08240 Alcohol dehydrogenase GroES-like domain HRJ47_16955 PF04102 SlyX HRJ47_16960 PF16326 ABC transporter C-terminal domain HRJ47_16960 PF00005 ABC transporter HRJ47_16960 PF12848 ABC transporter HRJ47_16975 PF03279 Bacterial lipid A biosynthesis acyltransferase HRJ47_16985 PF00375 Sodium:dicarboxylate symporter family HRJ47_16995 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRJ47_16995 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRJ47_17015 PF01416 tRNA pseudouridine synthase HRJ47_17025 PF01176 Translation initiation factor 1A / IF-1 HRJ47_17040 PF00180 Isocitrate/isopropylmalate dehydrogenase HRJ47_17050 PF00694 Aconitase C-terminal domain HRJ47_17055 PF00330 Aconitase family (aconitate hydratase) HRJ47_17065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_17065 PF03466 LysR substrate binding domain HRJ47_17085 PF00293 NUDIX domain HRJ47_17090 PF00391 PEP-utilising enzyme, mobile domain HRJ47_17090 PF02896 PEP-utilising enzyme, TIM barrel domain HRJ47_17090 PF05524 PEP-utilising enzyme, N-terminal HRJ47_17090 PF01590 GAF domain HRJ47_17095 PF00141 Peroxidase HRJ47_17100 PF12706 Beta-lactamase superfamily domain HRJ47_17105 PF03466 LysR substrate binding domain HRJ47_17105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_17115 PF02798 Glutathione S-transferase, N-terminal domain HRJ47_17120 PF08279 HTH domain HRJ47_17120 PF13280 WYL domain HRJ47_17125 PF13419 Haloacid dehalogenase-like hydrolase HRJ47_17130 PF01479 S4 domain HRJ47_17130 PF00849 RNA pseudouridylate synthase HRJ47_17135 PF10150 Ribonuclease E/G family HRJ47_17135 PF00575 S1 RNA binding domain HRJ47_17135 PF12111 Polyribonucleotide phosphorylase C terminal HRJ47_17140 PF00501 AMP-binding enzyme HRJ47_17140 PF13193 AMP-binding enzyme C-terminal domain HRJ47_17155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HRJ47_17155 PF03466 LysR substrate binding domain HRJ47_17165 PF04055 Radical SAM superfamily HRJ47_17165 PF06969 HemN C-terminal domain HRJ47_17175 PF01554 MatE HRJ47_17180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_17180 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_17180 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_17185 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_17185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_17190 PF03109 ABC1 family HRJ47_17195 PF01197 Ribosomal protein L31 HRJ47_17205 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HRJ47_17215 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRJ47_17215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HRJ47_17215 PF13247 4Fe-4S dicluster domain HRJ47_17225 PF03884 DNA gyrase inhibitor YacG HRJ47_17230 PF00753 Metallo-beta-lactamase superfamily HRJ47_17235 PF00762 Ferrochelatase HRJ47_17245 PF01177 Asp/Glu/Hydantoin racemase HRJ47_17265 PF01206 Sulfurtransferase TusA HRJ47_17270 PF00571 CBS domain HRJ47_17270 PF03471 Transporter associated domain HRJ47_17275 PF00795 Carbon-nitrogen hydrolase HRJ47_17280 PF01588 Putative tRNA binding domain HRJ47_17290 PF08334 Type II secretion system (T2SS), protein G HRJ47_17290 PF07963 Prokaryotic N-terminal methylation motif HRJ47_17295 PF00482 Type II secretion system (T2SS), protein F HRJ47_17300 PF00270 DEAD/DEAH box helicase HRJ47_17300 PF00271 Helicase conserved C-terminal domain HRJ47_17300 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HRJ47_17300 PF18074 Primosomal protein N C-terminal domain HRJ47_17300 PF17764 3′ DNA-binding domain (3′BD) HRJ47_17305 PF02254 TrkA-N domain HRJ47_17305 PF00999 Sodium/hydrogen exchanger family HRJ47_17310 PF01430 Hsp33 protein HRJ47_17320 PF01556 DnaJ C terminal domain HRJ47_17320 PF00226 DnaJ domain HRJ47_17330 PF01544 CorA-like Mg2+ transporter protein HRJ47_17335 PF03725 3' exoribonuclease family, domain 2 HRJ47_17335 PF00013 KH domain HRJ47_17335 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HRJ47_17335 PF01138 3' exoribonuclease family, domain 1 HRJ47_17335 PF00575 S1 RNA binding domain HRJ47_17340 PF00312 Ribosomal protein S15 HRJ47_17345 PF00144 Beta-lactamase HRJ47_17350 PF13538 UvrD-like helicase C-terminal domain HRJ47_17355 PF13361 UvrD-like helicase C-terminal domain HRJ47_17355 PF00580 UvrD/REP helicase N-terminal domain HRJ47_17355 PF12705 PD-(D/E)XK nuclease superfamily HRJ47_17360 PF17946 RecC C-terminal domain HRJ47_17370 PF03976 Polyphosphate kinase 2 (PPK2) HRJ47_17380 PF01209 ubiE/COQ5 methyltransferase family HRJ47_17390 PF03109 ABC1 family HRJ47_17395 PF01494 FAD binding domain HRJ47_17400 PF01502 Phosphoribosyl-AMP cyclohydrolase HRJ47_17415 PF00361 Proton-conducting membrane transporter HRJ47_17415 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HRJ47_17415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HRJ47_17415 PF13244 Domain of unknown function (DUF4040) HRJ47_17420 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HRJ47_17425 PF00361 Proton-conducting membrane transporter HRJ47_17430 PF01899 Na+/H+ ion antiporter subunit HRJ47_17435 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HRJ47_17440 PF03334 Na+/H+ antiporter subunit HRJ47_17445 PF02033 Ribosome-binding factor A HRJ47_17450 PF11987 Translation-initiation factor 2 HRJ47_17450 PF00009 Elongation factor Tu GTP binding domain HRJ47_17450 PF04760 Translation initiation factor IF-2, N-terminal region HRJ47_17450 PF08364 Bacterial translation initiation factor IF-2 associated region HRJ47_17455 PF13184 NusA-like KH domain HRJ47_17455 PF08529 NusA N-terminal domain HRJ47_17455 PF00575 S1 RNA binding domain HRJ47_17460 PF02576 RimP N-terminal domain HRJ47_17460 PF17384 RimP C-terminal SH3 domain HRJ47_17480 PF03840 Preprotein translocase SecG subunit HRJ47_17485 PF00121 Triosephosphate isomerase HRJ47_17490 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HRJ47_17490 PF00437 Type II/IV secretion system protein HRJ47_17495 PF00482 Type II secretion system (T2SS), protein F HRJ47_17500 PF06750 Bacterial Peptidase A24 N-terminal domain HRJ47_17500 PF01478 Type IV leader peptidase family HRJ47_17505 PF01121 Dephospho-CoA kinase HRJ47_17515 PF00588 SpoU rRNA Methylase family HRJ47_17515 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRJ47_17520 PF06865 Pyrimidine/purine nucleoside phosphorylase HRJ47_17530 PF02463 RecF/RecN/SMC N terminal domain HRJ47_17535 PF02622 Uncharacterized ACR, COG1678 HRJ47_17540 PF03652 Holliday junction resolvase HRJ47_17545 PF13533 Biotin-lipoyl like HRJ47_17575 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRJ47_17575 PF12833 Helix-turn-helix domain HRJ47_17575 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HRJ47_17575 PF02805 Metal binding domain of Ada HRJ47_17580 PF01066 CDP-alcohol phosphatidyltransferase HRJ47_17590 PF01541 GIY-YIG catalytic domain HRJ47_17590 PF08459 UvrC Helix-hairpin-helix N-terminal HRJ47_17590 PF02151 UvrB/uvrC motif HRJ47_17620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HRJ47_17620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HRJ47_17620 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_17625 PF00108 Thiolase, N-terminal domain HRJ47_17625 PF02803 Thiolase, C-terminal domain HRJ47_17645 PF09278 MerR, DNA binding HRJ47_17645 PF00376 MerR family regulatory protein HRJ47_17655 PF01323 DSBA-like thioredoxin domain HRJ47_17670 PF00183 Hsp90 protein HRJ47_17670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_17685 PF13726 Na+-H+ antiporter family HRJ47_17685 PF03553 Na+/H+ antiporter family HRJ47_17710 PF00623 RNA polymerase Rpb1, domain 2 HRJ47_17710 PF04983 RNA polymerase Rpb1, domain 3 HRJ47_17710 PF04998 RNA polymerase Rpb1, domain 5 HRJ47_17710 PF04997 RNA polymerase Rpb1, domain 1 HRJ47_17710 PF05000 RNA polymerase Rpb1, domain 4 HRJ47_17715 PF04560 RNA polymerase Rpb2, domain 7 HRJ47_17715 PF00562 RNA polymerase Rpb2, domain 6 HRJ47_17715 PF04563 RNA polymerase beta subunit HRJ47_17715 PF04561 RNA polymerase Rpb2, domain 2 HRJ47_17715 PF10385 RNA polymerase beta subunit external 1 domain HRJ47_17715 PF04565 RNA polymerase Rpb2, domain 3 HRJ47_17720 PF16320 Ribosomal protein L7/L12 dimerisation domain HRJ47_17720 PF00542 Ribosomal protein L7/L12 C-terminal domain HRJ47_17725 PF00466 Ribosomal protein L10 HRJ47_17730 PF00687 Ribosomal protein L1p/L10e family HRJ47_17735 PF03946 Ribosomal protein L11, N-terminal domain HRJ47_17735 PF00298 Ribosomal protein L11, RNA binding domain HRJ47_17740 PF00467 KOW motif HRJ47_17740 PF02357 Transcription termination factor nusG HRJ47_17745 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HRJ47_17755 PF00009 Elongation factor Tu GTP binding domain HRJ47_17755 PF03144 Elongation factor Tu domain 2 HRJ47_17755 PF03143 Elongation factor Tu C-terminal domain HRJ47_17780 PF00425 chorismate binding enzyme HRJ47_17780 PF04715 Anthranilate synthase component I, N terminal region HRJ47_17785 PF13419 Haloacid dehalogenase-like hydrolase HRJ47_17790 PF00498 FHA domain HRJ47_17790 PF12401 Protein of unknown function (DUF2662) HRJ47_17795 PF00263 Bacterial type II and III secretion system protein HRJ47_17795 PF03958 Bacterial type II/III secretion system short domain HRJ47_17810 PF00816 H-NS histone family HRJ47_17835 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HRJ47_17835 PF03900 Porphobilinogen deaminase, C-terminal domain HRJ47_17840 PF00072 Response regulator receiver domain HRJ47_17840 PF04397 LytTr DNA-binding domain HRJ47_17845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_17845 PF06580 Histidine kinase HRJ47_17845 PF07694 5TMR of 5TMR-LYT HRJ47_17850 PF00206 Lyase HRJ47_17850 PF14698 Argininosuccinate lyase C-terminal HRJ47_17855 PF04362 Bacterial Fe(2+) trafficking HRJ47_17860 PF01895 PhoU domain HRJ47_17865 PF02321 Outer membrane efflux protein HRJ47_17875 PF00892 EamA-like transporter family HRJ47_17895 PF01964 Radical SAM ThiC family HRJ47_17895 PF13667 ThiC-associated domain HRJ47_17900 PF00293 NUDIX domain HRJ47_17905 PF00149 Calcineurin-like phosphoesterase HRJ47_17910 PF01258 Prokaryotic dksA/traR C4-type zinc finger HRJ47_17915 PF00749 tRNA synthetases class I (E and Q), catalytic domain HRJ47_17920 PF01098 Cell cycle protein HRJ47_17925 PF02875 Mur ligase family, glutamate ligase domain HRJ47_17925 PF08245 Mur ligase middle domain HRJ47_17935 PF07670 Nucleoside recognition HRJ47_17935 PF02421 Ferrous iron transport protein B HRJ47_17935 PF07664 Ferrous iron transport protein B C terminus HRJ47_17945 PF00589 Phage integrase family HRJ47_17945 PF02899 Phage integrase, N-terminal SAM-like domain HRJ47_17950 PF10411 Disulfide bond isomerase protein N-terminus HRJ47_17950 PF13098 Thioredoxin-like domain HRJ47_17955 PF01842 ACT domain HRJ47_17955 PF00742 Homoserine dehydrogenase HRJ47_17955 PF03447 Homoserine dehydrogenase, NAD binding domain HRJ47_17960 PF00291 Pyridoxal-phosphate dependent enzyme HRJ47_17965 PF00768 D-alanyl-D-alanine carboxypeptidase HRJ47_17970 PF00196 Bacterial regulatory proteins, luxR family HRJ47_17970 PF00072 Response regulator receiver domain HRJ47_17975 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_17980 PF00158 Sigma-54 interaction domain HRJ47_17980 PF00072 Response regulator receiver domain HRJ47_17980 PF02954 Bacterial regulatory protein, Fis family HRJ47_17985 PF03572 Peptidase family S41 HRJ47_17985 PF00595 PDZ domain HRJ47_17990 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HRJ47_17990 PF01676 Metalloenzyme superfamily HRJ47_17995 PF03739 Lipopolysaccharide export system permease LptF/LptG HRJ47_18005 PF00883 Cytosol aminopeptidase family, catalytic domain HRJ47_18005 PF02789 Cytosol aminopeptidase family, N-terminal domain HRJ47_18025 PF00677 Lumazine binding domain HRJ47_18035 PF01872 RibD C-terminal domain HRJ47_18035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HRJ47_18040 PF03477 ATP cone domain HRJ47_18045 PF00909 Ammonium Transporter Family HRJ47_18050 PF00543 Nitrogen regulatory protein P-II HRJ47_18060 PF13335 Magnesium chelatase, subunit ChlI C-terminal HRJ47_18060 PF01078 Magnesium chelatase, subunit ChlI HRJ47_18065 PF00155 Aminotransferase class I and II HRJ47_18065 PF00392 Bacterial regulatory proteins, gntR family HRJ47_18070 PF00596 Class II Aldolase and Adducin N-terminal domain HRJ47_18075 PF00701 Dihydrodipicolinate synthetase family HRJ47_18090 PF03573 outer membrane porin, OprD family HRJ47_18095 PF00719 Inorganic pyrophosphatase HRJ47_18110 PF13193 AMP-binding enzyme C-terminal domain HRJ47_18110 PF00501 AMP-binding enzyme HRJ47_18115 PF03989 DNA gyrase C-terminal domain, beta-propeller HRJ47_18115 PF00521 DNA gyrase/topoisomerase IV, subunit A HRJ47_18120 PF07690 Major Facilitator Superfamily HRJ47_18125 PF03458 UPF0126 domain HRJ47_18130 PF02810 SEC-C motif HRJ47_18135 PF03471 Transporter associated domain HRJ47_18135 PF03741 Integral membrane protein TerC family HRJ47_18140 PF03641 Possible lysine decarboxylase HRJ47_18145 PF07690 Major Facilitator Superfamily HRJ47_18150 PF01183 Glycosyl hydrolases family 25 HRJ47_18155 PF11799 impB/mucB/samB family C-terminal domain HRJ47_18155 PF11798 IMS family HHH motif HRJ47_18155 PF00817 impB/mucB/samB family HRJ47_18165 PF00072 Response regulator receiver domain HRJ47_18165 PF00486 Transcriptional regulatory protein, C terminal HRJ47_18170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRJ47_18170 PF00672 HAMP domain HRJ47_18170 PF00512 His Kinase A (phospho-acceptor) domain HRJ47_18175 PF06123 Inner membrane protein CreD HRJ47_18195 PF04055 Radical SAM superfamily HRJ47_18195 PF11842 Domain of unknown function (DUF3362) HRJ47_18195 PF08497 Radical SAM N-terminal HRJ47_18215 PF03358 NADPH-dependent FMN reductase HRJ47_18230 PF00291 Pyridoxal-phosphate dependent enzyme HRJ47_18260 PF00440 Bacterial regulatory proteins, tetR family HRJ47_18285 PF01327 Polypeptide deformylase HRJ47_18295 PF17782 DprA winged helix domain HRJ47_18295 PF02481 DNA recombination-mediator protein A HRJ47_18300 PF01300 Telomere recombination HRJ47_18305 PF00892 EamA-like transporter family HRJ47_18310 PF00440 Bacterial regulatory proteins, tetR family HRJ47_18315 PF07690 Major Facilitator Superfamily HRJ47_18325 PF00255 Glutathione peroxidase HRJ47_18335 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HRJ47_18340 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRJ47_18340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRJ47_18345 PF00231 ATP synthase HRJ47_18350 PF00306 ATP synthase alpha/beta chain, C terminal domain HRJ47_18350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRJ47_18350 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRJ47_18355 PF00213 ATP synthase delta (OSCP) subunit HRJ47_18360 PF00430 ATP synthase B/B' CF(0) HRJ47_18365 PF00137 ATP synthase subunit C HRJ47_18370 PF00119 ATP synthase A chain HRJ47_18390 PF00005 ABC transporter HRJ47_18395 PF00950 ABC 3 transport family HRJ47_18400 PF01810 LysE type translocator HRJ47_18405 PF04261 Dyp-type peroxidase family HRJ47_18410 PF03949 Malic enzyme, NAD binding domain HRJ47_18410 PF00390 Malic enzyme, N-terminal domain HRJ47_18415 PF03485 Arginyl tRNA synthetase N terminal domain HRJ47_18415 PF00750 tRNA synthetases class I (R) HRJ47_18415 PF05746 DALR anticodon binding domain HRJ47_18435 PF05726 Pirin C-terminal cupin domain HRJ47_18435 PF02678 Pirin HRJ47_18445 PF03551 Transcriptional regulator PadR-like family HRJ47_18450 PF13302 Acetyltransferase (GNAT) domain HRJ47_18455 PF00958 GMP synthase C terminal domain HRJ47_18455 PF00117 Glutamine amidotransferase class-I HRJ47_18455 PF02540 NAD synthase HRJ47_18460 PF04286 Protein of unknown function (DUF445) HRJ47_18465 PF07681 DoxX HRJ47_18470 PF09335 SNARE associated Golgi protein HRJ47_18485 PF13614 AAA domain HRJ47_18495 PF01722 BolA-like protein HRJ47_18510 PF01648 4'-phosphopantetheinyl transferase superfamily HRJ47_18515 PF16363 GDP-mannose 4,6 dehydratase HRJ47_18530 PF00550 Phosphopantetheine attachment site HRJ47_18530 PF00975 Thioesterase domain HRJ47_18530 PF00501 AMP-binding enzyme HRJ47_18530 PF13193 AMP-binding enzyme C-terminal domain HRJ47_18530 PF00668 Condensation domain HRJ47_18535 PF00109 Beta-ketoacyl synthase, N-terminal domain HRJ47_18535 PF02801 Beta-ketoacyl synthase, C-terminal domain HRJ47_18535 PF08242 Methyltransferase domain HRJ47_18535 PF00550 Phosphopantetheine attachment site HRJ47_18535 PF14765 Polyketide synthase dehydratase HRJ47_18535 PF00975 Thioesterase domain HRJ47_18535 PF16197 Ketoacyl-synthetase C-terminal extension HRJ47_18540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_18540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_18540 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_18545 PF00501 AMP-binding enzyme HRJ47_18550 PF03472 Autoinducer binding domain HRJ47_18550 PF00196 Bacterial regulatory proteins, luxR family HRJ47_18560 PF00765 Autoinducer synthase HRJ47_18565 PF00083 Sugar (and other) transporter HRJ47_18565 PF07690 Major Facilitator Superfamily HRJ47_18570 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_18575 PF00378 Enoyl-CoA hydratase/isomerase HRJ47_18580 PF02770 Acyl-CoA dehydrogenase, middle domain HRJ47_18580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRJ47_18580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRJ47_18585 PF13193 AMP-binding enzyme C-terminal domain HRJ47_18585 PF00501 AMP-binding enzyme HRJ47_18590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HRJ47_18590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HRJ47_18595 PF00171 Aldehyde dehydrogenase family HRJ47_18605 PF00324 Amino acid permease HRJ47_18610 PF00324 Amino acid permease HRJ47_18615 PF01042 Endoribonuclease L-PSP HRJ47_18620 PF01168 Alanine racemase, N-terminal domain HRJ47_18620 PF00842 Alanine racemase, C-terminal domain HRJ47_18625 PF01266 FAD dependent oxidoreductase HRJ47_18630 PF01037 Lrp/AsnC ligand binding domain HRJ47_18640 PF07715 TonB-dependent Receptor Plug Domain HRJ47_18640 PF00593 TonB dependent receptor HRJ47_18655 PF00849 RNA pseudouridylate synthase HRJ47_18680 PF00440 Bacterial regulatory proteins, tetR family HRJ47_18685 PF00440 Bacterial regulatory proteins, tetR family HRJ47_18685 PF17926 Tetracyclin repressor-like, C-terminal domain HRJ47_18695 PF02525 Flavodoxin-like fold HRJ47_18710 PF00107 Zinc-binding dehydrogenase HRJ47_18710 PF08240 Alcohol dehydrogenase GroES-like domain HRJ47_18760 PF04717 Type VI secretion system, phage-baseplate injector HRJ47_18760 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) HRJ47_18760 PF13296 Putative type VI secretion system Rhs element Vgr HRJ47_18770 PF00293 NUDIX domain HRJ47_18795 PF00694 Aconitase C-terminal domain HRJ47_18795 PF00330 Aconitase family (aconitate hydratase) HRJ47_18800 PF00285 Citrate synthase, C-terminal domain HRJ47_18810 PF07729 FCD domain HRJ47_18810 PF00392 Bacterial regulatory proteins, gntR family HRJ47_18820 PF00155 Aminotransferase class I and II HRJ47_18825 PF09330 D-lactate dehydrogenase, membrane binding HRJ47_18825 PF01565 FAD binding domain HRJ47_18830 PF01070 FMN-dependent dehydrogenase HRJ47_18835 PF07729 FCD domain HRJ47_18835 PF00392 Bacterial regulatory proteins, gntR family HRJ47_18840 PF02652 L-lactate permease HRJ47_18845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRJ47_18845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRJ47_18845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRJ47_18845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRJ47_18855 PF16363 GDP-mannose 4,6 dehydratase HRJ47_18860 PF00342 Phosphoglucose isomerase HRJ47_18865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HRJ47_18865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HRJ47_18865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HRJ47_18870 PF00483 Nucleotidyl transferase HRJ47_18875 PF02397 Bacterial sugar transferase HRJ47_18880 PF13477 Glycosyl transferase 4-like HRJ47_18880 PF00534 Glycosyl transferases group 1 HRJ47_18885 PF00534 Glycosyl transferases group 1 HRJ47_18895 PF13439 Glycosyltransferase Family 4 HRJ47_18895 PF00534 Glycosyl transferases group 1 HRJ47_18900 PF00535 Glycosyl transferase family 2 HRJ47_18915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRJ47_18920 PF00483 Nucleotidyl transferase HRJ47_18925 PF16363 GDP-mannose 4,6 dehydratase HRJ47_18930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HRJ47_18930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HRJ47_18930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HRJ47_18935 PF02563 Polysaccharide biosynthesis/export protein HRJ47_18935 PF10531 SLBB domain HRJ47_18935 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HRJ47_18940 PF01451 Low molecular weight phosphotyrosine protein phosphatase HRJ47_18945 PF13614 AAA domain HRJ47_18945 PF13807 G-rich domain on putative tyrosine kinase HRJ47_18945 PF02706 Chain length determinant protein HRJ47_18950 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HRJ47_18950 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRJ47_18955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HRJ47_18955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRJ47_18965 PF03023 Lipid II flippase MurJ HRJ47_18970 PF01510 N-acetylmuramoyl-L-alanine amidase HRJ47_18975 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HRJ47_18975 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HRJ47_18985 PF04185 Phosphoesterase family HRJ47_18985 PF05506 Domain of unknown function (DUF756) HRJ47_18990 PF01138 3' exoribonuclease family, domain 1 HRJ47_18990 PF03725 3' exoribonuclease family, domain 2 HRJ47_18995 PF00487 Fatty acid desaturase HRJ47_19000 PF00175 Oxidoreductase NAD-binding domain HRJ47_19005 PF00440 Bacterial regulatory proteins, tetR family HRJ47_19010 PF08360 QacR-like protein, C-terminal region HRJ47_19010 PF00440 Bacterial regulatory proteins, tetR family HRJ47_19015 PF01323 DSBA-like thioredoxin domain HRJ47_19025 PF13419 Haloacid dehalogenase-like hydrolase HRJ47_19030 PF00106 short chain dehydrogenase HRJ47_19045 PF00696 Amino acid kinase family HRJ47_19045 PF00583 Acetyltransferase (GNAT) family HRJ47_19050 PF09084 NMT1/THI5 like HRJ47_19055 PF09084 NMT1/THI5 like HRJ47_19060 PF00296 Luciferase-like monooxygenase HRJ47_19065 PF00528 Binding-protein-dependent transport system inner membrane component HRJ47_19070 PF00005 ABC transporter HRJ47_19075 PF00440 Bacterial regulatory proteins, tetR family HRJ47_19075 PF08362 YcdC-like protein, C-terminal region HRJ47_19080 PF01048 Phosphorylase superfamily HRJ47_19090 PF01687 Riboflavin kinase HRJ47_19090 PF06574 FAD synthetase HRJ47_19095 PF08264 Anticodon-binding domain of tRNA HRJ47_19095 PF00133 tRNA synthetases class I (I, L, M and V) HRJ47_19095 PF06827 Zinc finger found in FPG and IleRS HRJ47_19100 PF01252 Signal peptidase (SPase) II HRJ47_19105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRJ47_19145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRJ47_19150 PF07859 alpha/beta hydrolase fold HRJ47_19175 PF01025 GrpE HRJ47_19180 PF00012 Hsp70 protein HRJ47_19200 PF13406 Transglycosylase SLT domain HRJ47_19205 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HRJ47_19205 PF02222 ATP-grasp domain HRJ47_19210 PF00731 AIR carboxylase HRJ47_19220 PF08245 Mur ligase middle domain HRJ47_19220 PF02875 Mur ligase family, glutamate ligase domain HRJ47_19220 PF01225 Mur ligase family, catalytic domain HRJ47_19230 PF01569 PAP2 superfamily HRJ47_19235 PF03741 Integral membrane protein TerC family HRJ47_19245 PF03738 Glutathionylspermidine synthase preATP-grasp HRJ47_19250 PF13340 Putative transposase of IS4/5 family (DUF4096) HRJ47_19255 PF00355 Rieske [2Fe-2S] domain HRJ47_19260 PF01979 Amidohydrolase family HRJ47_19265 PF00156 Phosphoribosyl transferase domain HRJ47_19275 PF10411 Disulfide bond isomerase protein N-terminus HRJ47_19275 PF13098 Thioredoxin-like domain HRJ47_19280 PF16916 Dimerisation domain of Zinc Transporter HRJ47_19280 PF01545 Cation efflux family HRJ47_19285 PF02583 Metal-sensitive transcriptional repressor HRJ47_19290 PF01926 50S ribosome-binding GTPase HRJ47_19290 PF12631 MnmE helical domain HRJ47_19290 PF10396 GTP-binding protein TrmE N-terminus HRJ47_19295 PF02096 60Kd inner membrane protein HRJ47_19295 PF14849 YidC periplasmic domain HRJ47_19300 PF01809 Putative membrane protein insertion efficiency factor HRJ47_19305 PF00825 Ribonuclease P HRJ47_19310 PF00468 Ribosomal protein L34 HRJ47_19430 PF13361 UvrD-like helicase C-terminal domain HRJ47_19430 PF00580 UvrD/REP helicase N-terminal domain HRJ47_19465 PF13614 AAA domain HRJ47_19470 PF02195 ParB-like nuclease domain HRJ47_19470 PF17762 HTH domain found in ParB protein HRJ47_19490 PF00437 Type II/IV secretion system protein HRJ47_19645 PF01494 FAD binding domain HRJ47_19650 PF00239 Resolvase, N terminal domain HRJ47_19650 PF02796 Helix-turn-helix domain of resolvase HRJ47_19670 PF01636 Phosphotransferase enzyme family HRJ47_19680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRJ47_19680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRJ47_19680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRJ47_19680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRJ47_19685 PF00809 Pterin binding enzyme HRJ47_19695 PF02332 Methane/Phenol/Toluene Hydroxylase HRJ47_19710 PF00239 Resolvase, N terminal domain HRJ47_19710 PF02796 Helix-turn-helix domain of resolvase HRJ47_19745 PF00186 Dihydrofolate reductase HRJ47_19750 PF13340 Putative transposase of IS4/5 family (DUF4096) HRJ47_19765 PF00717 Peptidase S24-like HRJ47_19770 PF00817 impB/mucB/samB family HRJ47_19770 PF11798 IMS family HHH motif HRJ47_19770 PF11799 impB/mucB/samB family C-terminal domain HRJ47_19770 PF13438 Domain of unknown function (DUF4113) HRJ47_19780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRJ47_19785 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HRJ47_19795 PF00753 Metallo-beta-lactamase superfamily HRJ47_19830 PF00665 Integrase core domain HRJ47_19830 PF13936 Helix-turn-helix domain HRJ47_19835 PF01636 Phosphotransferase enzyme family HRJ47_19840 PF00665 Integrase core domain HRJ47_19840 PF13936 Helix-turn-helix domain HRJ47_19875 PF01131 DNA topoisomerase HRJ47_19875 PF01751 Toprim domain HRJ47_19875 PF01396 Topoisomerase DNA binding C4 zinc finger HRJ47_19935 PF02899 Phage integrase, N-terminal SAM-like domain HRJ47_19935 PF00589 Phage integrase family HRJ47_19960 PF07690 Major Facilitator Superfamily HRJ47_19970 PF02522 Aminoglycoside 3-N-acetyltransferase HRJ47_20000 PF02909 Tetracyclin repressor-like, C-terminal domain HRJ47_20000 PF00440 Bacterial regulatory proteins, tetR family HRJ47_20005 PF07690 Major Facilitator Superfamily HRJ47_20010 PF02796 Helix-turn-helix domain of resolvase HRJ47_20010 PF00239 Resolvase, N terminal domain HRJ47_20015 PF01636 Phosphotransferase enzyme family HRJ47_20020 PF00005 ABC transporter HRJ47_20020 PF12848 ABC transporter HRJ47_20040 PF01381 Helix-turn-helix HRJ47_20045 PF05973 Phage derived protein Gp49-like (DUF891) HRJ47_20070 PF00239 Resolvase, N terminal domain HRJ47_20070 PF02796 Helix-turn-helix domain of resolvase HRJ47_20095 PF00962 Adenosine/AMP deaminase HRJ47_20175 PF01435 Peptidase family M48