locus-tag class description DBQ26_00005 PF00902 Sec-independent protein translocase protein (TatC) DBQ26_00070 PF02216 B domain DBQ26_00070 PF00746 LPXTG cell wall anchor motif DBQ26_00070 PF01476 LysM domain DBQ26_00070 PF03373 Octapeptide repeat DBQ26_00070 PF04650 YSIRK type signal peptide DBQ26_00085 PF03461 TRCF domain DBQ26_00085 PF00271 Helicase conserved C-terminal domain DBQ26_00085 PF00270 DEAD/DEAH box helicase DBQ26_00085 PF17757 UvrB interaction domain DBQ26_00085 PF02559 CarD-like/TRCF domain DBQ26_00105 PF09383 NIL domain DBQ26_00105 PF00005 ABC transporter DBQ26_00175 PF13005 zinc-finger binding domain of transposase IS66 DBQ26_00175 PF03050 Transposase IS66 family DBQ26_00175 PF13817 IS66 C-terminal element DBQ26_00175 PF13007 Transposase C of IS166 homeodomain DBQ26_00205 PF10410 DnaB-helicase binding domain of primase DBQ26_00205 PF08275 DNA primase catalytic core, N-terminal domain DBQ26_00205 PF01807 CHC2 zinc finger DBQ26_00240 PF00625 Guanylate kinase DBQ26_00255 PF07015 VirC1 protein DBQ26_00265 PF02899 Phage integrase, N-terminal SAM-like domain DBQ26_00265 PF00589 Phage integrase family DBQ26_00285 PF00872 Transposase, Mutator family DBQ26_00290 PF13356 Arm DNA-binding domain DBQ26_00290 PF00589 Phage integrase family DBQ26_00295 PF04151 Bacterial pre-peptidase C-terminal domain DBQ26_00305 PF16884 N-terminal domain of oxidoreductase DBQ26_00305 PF00107 Zinc-binding dehydrogenase DBQ26_00310 PF16925 Tetracyclin repressor-like, C-terminal domain DBQ26_00310 PF00440 Bacterial regulatory proteins, tetR family DBQ26_00320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DBQ26_00330 PF00465 Iron-containing alcohol dehydrogenase DBQ26_00345 PF00756 Putative esterase DBQ26_00350 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_00350 PF00107 Zinc-binding dehydrogenase DBQ26_00355 PF02583 Metal-sensitive transcriptional repressor DBQ26_00365 PF12833 Helix-turn-helix domain DBQ26_00365 PF01965 DJ-1/PfpI family DBQ26_00370 PF01321 Creatinase/Prolidase N-terminal domain DBQ26_00370 PF00557 Metallopeptidase family M24 DBQ26_00375 PF00083 Sugar (and other) transporter DBQ26_00375 PF08946 Osmosensory transporter coiled coil DBQ26_00380 PF00892 EamA-like transporter family DBQ26_00395 PF14765 Polyketide synthase dehydratase DBQ26_00395 PF02801 Beta-ketoacyl synthase, C-terminal domain DBQ26_00395 PF00698 Acyl transferase domain DBQ26_00395 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_00395 PF16197 Ketoacyl-synthetase C-terminal extension DBQ26_00395 PF00109 Beta-ketoacyl synthase, N-terminal domain DBQ26_00395 PF08659 KR domain DBQ26_00395 PF00550 Phosphopantetheine attachment site DBQ26_00400 PF00107 Zinc-binding dehydrogenase DBQ26_00400 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_00410 PF00872 Transposase, Mutator family DBQ26_00420 PF02627 Carboxymuconolactone decarboxylase family DBQ26_00435 PF00593 TonB dependent receptor DBQ26_00435 PF07660 Secretin and TonB N terminus short domain DBQ26_00435 PF07715 TonB-dependent Receptor Plug Domain DBQ26_00445 PF05973 Phage derived protein Gp49-like (DUF891) DBQ26_00470 PF05973 Phage derived protein Gp49-like (DUF891) DBQ26_00500 PF13737 Transposase DDE domain DBQ26_00545 PF02661 Fic/DOC family DBQ26_00570 PF00245 Alkaline phosphatase DBQ26_00575 PF13737 Transposase DDE domain DBQ26_00580 PF17762 HTH domain found in ParB protein DBQ26_00580 PF02195 ParB-like nuclease domain DBQ26_00585 PF13614 AAA domain DBQ26_00590 PF13737 Transposase DDE domain DBQ26_00620 PF01435 Peptidase family M48 DBQ26_00625 PF13180 PDZ domain DBQ26_00650 PF13359 DDE superfamily endonuclease DBQ26_00650 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_00675 PF13737 Transposase DDE domain DBQ26_00690 PF00011 Hsp20/alpha crystallin family DBQ26_00695 PF10431 C-terminal, D2-small domain, of ClpB protein DBQ26_00695 PF02861 Clp amino terminal domain, pathogenicity island component DBQ26_00695 PF17871 AAA lid domain DBQ26_00695 PF00004 ATPase family associated with various cellular activities (AAA) DBQ26_00695 PF07724 AAA domain (Cdc48 subfamily) DBQ26_00720 PF00085 Thioredoxin DBQ26_00725 PF02080 TrkA-C domain DBQ26_00725 PF00999 Sodium/hydrogen exchanger family DBQ26_00725 PF02254 TrkA-N domain DBQ26_00735 PF13737 Transposase DDE domain DBQ26_00755 PF02416 mttA/Hcf106 family DBQ26_00760 PF02416 mttA/Hcf106 family DBQ26_00790 PF03389 MobA/MobL family DBQ26_00850 PF03432 Relaxase/Mobilisation nuclease domain DBQ26_00855 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DBQ26_00860 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DBQ26_00890 PF13610 DDE domain DBQ26_00955 PF13356 Arm DNA-binding domain DBQ26_00955 PF00589 Phage integrase family DBQ26_00995 PF00717 Peptidase S24-like DBQ26_00995 PF01726 LexA DNA binding domain DBQ26_01000 PF13438 Domain of unknown function (DUF4113) DBQ26_01000 PF00817 impB/mucB/samB family DBQ26_01000 PF11799 impB/mucB/samB family C-terminal domain DBQ26_01000 PF11798 IMS family HHH motif DBQ26_01035 PF02661 Fic/DOC family DBQ26_01060 PF13610 DDE domain DBQ26_01075 PF04221 RelB antitoxin DBQ26_01085 PF01636 Phosphotransferase enzyme family DBQ26_01105 PF12833 Helix-turn-helix domain DBQ26_01115 PF00905 Penicillin binding protein transpeptidase domain DBQ26_01125 PF00072 Response regulator receiver domain DBQ26_01125 PF00486 Transcriptional regulatory protein, C terminal DBQ26_01130 PF00989 PAS fold DBQ26_01130 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_01130 PF18698 Histidine kinase sensor domain DBQ26_01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_01130 PF00672 HAMP domain DBQ26_01135 PF07690 Major Facilitator Superfamily DBQ26_01140 PF00873 AcrB/AcrD/AcrF family DBQ26_01145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DBQ26_01145 PF00529 HlyD membrane-fusion protein of T1SS DBQ26_01165 PF00239 Resolvase, N terminal domain DBQ26_01165 PF02796 Helix-turn-helix domain of resolvase DBQ26_01180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DBQ26_01220 PF03796 DnaB-like helicase C terminal domain DBQ26_01220 PF00772 DnaB-like helicase N terminal domain DBQ26_01255 PF13356 Arm DNA-binding domain DBQ26_01255 PF00589 Phage integrase family DBQ26_01265 PF02705 K+ potassium transporter DBQ26_01310 PF00977 Histidine biosynthesis protein DBQ26_01315 PF01636 Phosphotransferase enzyme family DBQ26_01330 PF03992 Antibiotic biosynthesis monooxygenase DBQ26_01345 PF00005 ABC transporter DBQ26_01350 PF00977 Histidine biosynthesis protein DBQ26_01355 PF01612 3'-5' exonuclease DBQ26_01355 PF00570 HRDC domain DBQ26_01365 PF00117 Glutamine amidotransferase class-I DBQ26_01370 PF00475 Imidazoleglycerol-phosphate dehydratase DBQ26_01390 PF00583 Acetyltransferase (GNAT) family DBQ26_01395 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DBQ26_01395 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DBQ26_01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_01405 PF00672 HAMP domain DBQ26_01405 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_01410 PF00486 Transcriptional regulatory protein, C terminal DBQ26_01410 PF00072 Response regulator receiver domain DBQ26_01415 PF17674 HHH domain DBQ26_01415 PF16921 Tex protein YqgF-like domain DBQ26_01415 PF09371 Tex-like protein N-terminal domain DBQ26_01415 PF00575 S1 RNA binding domain DBQ26_01420 PF01740 STAS domain DBQ26_01420 PF00916 Sulfate permease family DBQ26_01425 PF00106 short chain dehydrogenase DBQ26_01430 PF01053 Cys/Met metabolism PLP-dependent enzyme DBQ26_01435 PF12848 ABC transporter DBQ26_01435 PF00005 ABC transporter DBQ26_01460 PF04191 Phospholipid methyltransferase DBQ26_01480 PF00529 HlyD membrane-fusion protein of T1SS DBQ26_01480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DBQ26_01485 PF00873 AcrB/AcrD/AcrF family DBQ26_01490 PF01545 Cation efflux family DBQ26_01520 PF00324 Amino acid permease DBQ26_01535 PF00749 tRNA synthetases class I (E and Q), catalytic domain DBQ26_01550 PF01795 MraW methylase family DBQ26_01560 PF03717 Penicillin-binding Protein dimerisation domain DBQ26_01560 PF00905 Penicillin binding protein transpeptidase domain DBQ26_01565 PF02875 Mur ligase family, glutamate ligase domain DBQ26_01565 PF08245 Mur ligase middle domain DBQ26_01565 PF01225 Mur ligase family, catalytic domain DBQ26_01570 PF02875 Mur ligase family, glutamate ligase domain DBQ26_01570 PF08245 Mur ligase middle domain DBQ26_01570 PF01225 Mur ligase family, catalytic domain DBQ26_01575 PF00953 Glycosyl transferase family 4 DBQ26_01585 PF13847 Methyltransferase domain DBQ26_01590 PF17092 Penicillin-binding protein OB-like domain DBQ26_01590 PF00912 Transglycosylase DBQ26_01590 PF00905 Penicillin binding protein transpeptidase domain DBQ26_01615 PF03958 Bacterial type II/III secretion system short domain DBQ26_01615 PF11741 AMIN domain DBQ26_01615 PF00263 Bacterial type II and III secretion system protein DBQ26_01615 PF07660 Secretin and TonB N terminus short domain DBQ26_01620 PF01202 Shikimate kinase DBQ26_01625 PF01761 3-dehydroquinate synthase DBQ26_01635 PF04898 Glutamate synthase central domain DBQ26_01635 PF00310 Glutamine amidotransferases class-II DBQ26_01635 PF01493 GXGXG motif DBQ26_01635 PF01645 Conserved region in glutamate synthase DBQ26_01640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DBQ26_01640 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_01650 PF04011 LemA family DBQ26_01655 PF04536 TPM domain DBQ26_01665 PF07963 Prokaryotic N-terminal methylation motif DBQ26_01665 PF00114 Pilin (bacterial filament) DBQ26_01675 PF04932 O-Antigen ligase DBQ26_01675 PF15864 Protein glycosylation ligase DBQ26_01675 PF11846 Virulence factor membrane-bound polymerase, C-terminal DBQ26_01680 PF00210 Ferritin-like domain DBQ26_01685 PF04324 BFD-like [2Fe-2S] binding domain DBQ26_01695 PF01042 Endoribonuclease L-PSP DBQ26_01700 PF02824 TGS domain DBQ26_01700 PF04607 Region found in RelA / SpoT proteins DBQ26_01700 PF13291 ACT domain DBQ26_01710 PF01192 RNA polymerase Rpb6 DBQ26_01715 PF00625 Guanylate kinase DBQ26_01720 PF02401 LytB protein DBQ26_01760 PF00886 Ribosomal protein S16 DBQ26_01765 PF01782 RimM N-terminal domain DBQ26_01765 PF05239 PRC-barrel domain DBQ26_01770 PF01746 tRNA (Guanine-1)-methyltransferase DBQ26_01775 PF01245 Ribosomal protein L19 DBQ26_01780 PF00561 alpha/beta hydrolase fold DBQ26_01785 PF03280 Proteobacterial lipase chaperone protein DBQ26_01790 PF16198 tRNA pseudouridylate synthase B C-terminal domain DBQ26_01790 PF01509 TruB family pseudouridylate synthase (N terminal domain) DBQ26_01790 PF09157 Pseudouridine synthase II TruB, C-terminal DBQ26_01795 PF01925 Sulfite exporter TauE/SafE DBQ26_01805 PF00892 EamA-like transporter family DBQ26_01810 PF00892 EamA-like transporter family DBQ26_01815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DBQ26_01815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DBQ26_01820 PF01565 FAD binding domain DBQ26_01820 PF02913 FAD linked oxidases, C-terminal domain DBQ26_01830 PF03992 Antibiotic biosynthesis monooxygenase DBQ26_01835 PF02525 Flavodoxin-like fold DBQ26_01845 PF07690 Major Facilitator Superfamily DBQ26_01850 PF12805 FUSC-like inner membrane protein yccS DBQ26_01855 PF00080 Copper/zinc superoxide dismutase (SODC) DBQ26_01860 PF01594 AI-2E family transporter DBQ26_01865 PF13614 AAA domain DBQ26_01885 PF08241 Methyltransferase domain DBQ26_01895 PF00324 Amino acid permease DBQ26_01900 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DBQ26_01900 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DBQ26_01905 PF00202 Aminotransferase class-III DBQ26_01910 PF04958 Arginine N-succinyltransferase beta subunit DBQ26_01915 PF00171 Aldehyde dehydrogenase family DBQ26_01920 PF04996 Succinylarginine dihydrolase DBQ26_01925 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DBQ26_01945 PF00872 Transposase, Mutator family DBQ26_01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_01960 PF03466 LysR substrate binding domain DBQ26_01965 PF00892 EamA-like transporter family DBQ26_01980 PF02092 Glycyl-tRNA synthetase beta subunit DBQ26_01980 PF05746 DALR anticodon binding domain DBQ26_01985 PF02091 Glycyl-tRNA synthetase alpha subunit DBQ26_02010 PF03061 Thioesterase superfamily DBQ26_02010 PF00392 Bacterial regulatory proteins, gntR family DBQ26_02010 PF07085 DRTGG domain DBQ26_02010 PF00571 CBS domain DBQ26_02015 PF04024 PspC domain DBQ26_02025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_02025 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_02025 PF12806 Acetyl-CoA dehydrogenase C-terminal like DBQ26_02025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_02035 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DBQ26_02035 PF08501 Shikimate dehydrogenase substrate binding domain DBQ26_02035 PF01488 Shikimate / quinate 5-dehydrogenase DBQ26_02040 PF01218 Coproporphyrinogen III oxidase DBQ26_02045 PF00925 GTP cyclohydrolase II DBQ26_02050 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DBQ26_02050 PF02780 Transketolase, C-terminal domain DBQ26_02050 PF02779 Transketolase, pyrimidine binding domain DBQ26_02055 PF00459 Inositol monophosphatase family DBQ26_02060 PF12343 Cold shock protein DEAD box A DBQ26_02060 PF03880 DbpA RNA binding domain DBQ26_02060 PF00271 Helicase conserved C-terminal domain DBQ26_02060 PF00270 DEAD/DEAH box helicase DBQ26_02070 PF00005 ABC transporter DBQ26_02075 PF02405 Permease MlaE DBQ26_02085 PF05494 MlaC protein DBQ26_02095 PF01544 CorA-like Mg2+ transporter protein DBQ26_02100 PF03641 Possible lysine decarboxylase DBQ26_02105 PF00293 NUDIX domain DBQ26_02110 PF00156 Phosphoribosyl transferase domain DBQ26_02115 PF00271 Helicase conserved C-terminal domain DBQ26_02115 PF00270 DEAD/DEAH box helicase DBQ26_02115 PF17191 RecG wedge domain DBQ26_02130 PF01553 Acyltransferase DBQ26_02140 PF00375 Sodium:dicarboxylate symporter family DBQ26_02150 PF01926 50S ribosome-binding GTPase DBQ26_02155 PF02082 Transcriptional regulator DBQ26_02160 PF00970 Oxidoreductase FAD-binding domain DBQ26_02160 PF00042 Globin DBQ26_02160 PF00175 Oxidoreductase NAD-binding domain DBQ26_02170 PF05872 Bacterial protein of unknown function (DUF853) DBQ26_02175 PF01053 Cys/Met metabolism PLP-dependent enzyme DBQ26_02180 PF00117 Glutamine amidotransferase class-I DBQ26_02185 PF00338 Ribosomal protein S10p/S20e DBQ26_02190 PF00297 Ribosomal protein L3 DBQ26_02195 PF00573 Ribosomal protein L4/L1 family DBQ26_02200 PF00276 Ribosomal protein L23 DBQ26_02205 PF03947 Ribosomal Proteins L2, C-terminal domain DBQ26_02205 PF00181 Ribosomal Proteins L2, RNA binding domain DBQ26_02210 PF00203 Ribosomal protein S19 DBQ26_02215 PF00237 Ribosomal protein L22p/L17e DBQ26_02220 PF00189 Ribosomal protein S3, C-terminal domain DBQ26_02220 PF07650 KH domain DBQ26_02225 PF00252 Ribosomal protein L16p/L10e DBQ26_02230 PF00831 Ribosomal L29 protein DBQ26_02235 PF00366 Ribosomal protein S17 DBQ26_02240 PF00238 Ribosomal protein L14p/L23e DBQ26_02245 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DBQ26_02245 PF00467 KOW motif DBQ26_02250 PF00281 Ribosomal protein L5 DBQ26_02250 PF00673 ribosomal L5P family C-terminus DBQ26_02255 PF00253 Ribosomal protein S14p/S29e DBQ26_02260 PF00410 Ribosomal protein S8 DBQ26_02265 PF00347 Ribosomal protein L6 DBQ26_02270 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DBQ26_02275 PF03719 Ribosomal protein S5, C-terminal domain DBQ26_02275 PF00333 Ribosomal protein S5, N-terminal domain DBQ26_02280 PF00327 Ribosomal protein L30p/L7e DBQ26_02285 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DBQ26_02290 PF00344 SecY translocase DBQ26_02295 PF00444 Ribosomal protein L36 DBQ26_02300 PF00416 Ribosomal protein S13/S18 DBQ26_02305 PF00411 Ribosomal protein S11 DBQ26_02310 PF00163 Ribosomal protein S4/S9 N-terminal domain DBQ26_02310 PF01479 S4 domain DBQ26_02315 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DBQ26_02315 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DBQ26_02315 PF01000 RNA polymerase Rpb3/RpoA insert domain DBQ26_02320 PF01196 Ribosomal protein L17 DBQ26_02325 PF00743 Flavin-binding monooxygenase-like DBQ26_02330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_02330 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_02330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_02335 PF03937 Flavinator of succinate dehydrogenase DBQ26_02365 PF09526 Probable metal-binding protein (DUF2387) DBQ26_02370 PF01432 Peptidase family M3 DBQ26_02375 PF08461 Ribonuclease R winged-helix domain DBQ26_02375 PF08206 Ribonuclease B OB domain DBQ26_02375 PF00773 RNB domain DBQ26_02375 PF17876 Cold shock domain DBQ26_02375 PF00575 S1 RNA binding domain DBQ26_02425 PF01557 Fumarylacetoacetate (FAA) hydrolase family DBQ26_02430 PF03631 Virulence factor BrkB DBQ26_02435 PF03358 NADPH-dependent FMN reductase DBQ26_02460 PF02130 Uncharacterized protein family UPF0054 DBQ26_02465 PF02562 PhoH-like protein DBQ26_02470 PF01938 TRAM domain DBQ26_02470 PF04055 Radical SAM superfamily DBQ26_02470 PF00919 Uncharacterized protein family UPF0004 DBQ26_02475 PF01464 Transglycosylase SLT domain DBQ26_02475 PF10145 Phage-related minor tail protein DBQ26_02475 PF01551 Peptidase family M23 DBQ26_02485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DBQ26_02485 PF00056 lactate/malate dehydrogenase, NAD binding domain DBQ26_02505 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DBQ26_02510 PF01066 CDP-alcohol phosphatidyltransferase DBQ26_02555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_02555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_02555 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_02560 PF13302 Acetyltransferase (GNAT) domain DBQ26_02565 PF00440 Bacterial regulatory proteins, tetR family DBQ26_02565 PF17932 Tetracyclin repressor-like, C-terminal domain DBQ26_02580 PF01039 Carboxyl transferase domain DBQ26_02585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_02585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_02585 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_02590 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_02595 PF00289 Biotin carboxylase, N-terminal domain DBQ26_02595 PF02785 Biotin carboxylase C-terminal domain DBQ26_02595 PF00364 Biotin-requiring enzyme DBQ26_02595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DBQ26_02625 PF04386 Stringent starvation protein B DBQ26_02630 PF13417 Glutathione S-transferase, N-terminal domain DBQ26_02630 PF00043 Glutathione S-transferase, C-terminal domain DBQ26_02635 PF00380 Ribosomal protein S9/S16 DBQ26_02640 PF00572 Ribosomal protein L13 DBQ26_02645 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DBQ26_02650 PF00398 Ribosomal RNA adenine dimethylase DBQ26_02655 PF00149 Calcineurin-like phosphoesterase DBQ26_02675 PF16360 GTP-binding GTPase Middle Region DBQ26_02675 PF13167 GTP-binding GTPase N-terminal DBQ26_02675 PF01926 50S ribosome-binding GTPase DBQ26_02685 PF13091 PLD-like domain DBQ26_02690 PF10518 TAT (twin-arginine translocation) pathway signal sequence DBQ26_02690 PF00149 Calcineurin-like phosphoesterase DBQ26_02695 PF00691 OmpA family DBQ26_02695 PF01389 OmpA-like transmembrane domain DBQ26_02700 PF17152 Periplasmic sensor domain DBQ26_02700 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_02705 PF13689 YfiR/HmsC-like DBQ26_02745 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_02745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DBQ26_02755 PF00753 Metallo-beta-lactamase superfamily DBQ26_02755 PF04273 Putative phosphatase (DUF442) DBQ26_02760 PF00561 alpha/beta hydrolase fold DBQ26_02765 PF00085 Thioredoxin DBQ26_02770 PF03061 Thioesterase superfamily DBQ26_02785 PF04461 Protein of unknown function (DUF520) DBQ26_02795 PF01266 FAD dependent oxidoreductase DBQ26_02795 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DBQ26_02805 PF03795 YCII-related domain DBQ26_02810 PF04279 Intracellular septation protein A DBQ26_02820 PF01062 Bestrophin, RFP-TM, chloride channel DBQ26_02825 PF04002 RadC-like JAB domain DBQ26_02830 PF02441 Flavoprotein DBQ26_02830 PF04127 DNA / pantothenate metabolism flavoprotein DBQ26_02835 PF07549 SecD/SecF GG Motif DBQ26_02835 PF02355 Protein export membrane protein DBQ26_02840 PF07549 SecD/SecF GG Motif DBQ26_02840 PF13721 SecD export protein N-terminal TM region DBQ26_02840 PF02355 Protein export membrane protein DBQ26_02845 PF02699 Preprotein translocase subunit DBQ26_02850 PF01702 Queuine tRNA-ribosyltransferase DBQ26_02855 PF02547 Queuosine biosynthesis protein DBQ26_02865 PF01627 Hpt domain DBQ26_02865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_02865 PF00672 HAMP domain DBQ26_02865 PF00072 Response regulator receiver domain DBQ26_02865 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_02865 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DBQ26_02870 PF08335 GlnD PII-uridylyltransferase DBQ26_02870 PF03710 Glutamate-ammonia ligase adenylyltransferase DBQ26_02875 PF01063 Amino-transferase class IV DBQ26_02885 PF01522 Polysaccharide deacetylase DBQ26_02900 PF00535 Glycosyl transferase family 2 DBQ26_02915 PF01336 OB-fold nucleic acid binding domain DBQ26_02915 PF02938 GAD domain DBQ26_02915 PF00152 tRNA synthetases class II (D, K and N) DBQ26_02925 PF07715 TonB-dependent Receptor Plug Domain DBQ26_02925 PF00593 TonB dependent receptor DBQ26_02945 PF06146 Phosphate-starvation-inducible E DBQ26_02950 PF02798 Glutathione S-transferase, N-terminal domain DBQ26_02950 PF00043 Glutathione S-transferase, C-terminal domain DBQ26_02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_02955 PF03466 LysR substrate binding domain DBQ26_02960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_02960 PF12806 Acetyl-CoA dehydrogenase C-terminal like DBQ26_02960 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_02960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_02965 PF12806 Acetyl-CoA dehydrogenase C-terminal like DBQ26_02965 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_02965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_02965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_02975 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_02975 PF00672 HAMP domain DBQ26_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_02980 PF00486 Transcriptional regulatory protein, C terminal DBQ26_02980 PF00072 Response regulator receiver domain DBQ26_02990 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DBQ26_03010 PF01923 Cobalamin adenosyltransferase DBQ26_03015 PF07715 TonB-dependent Receptor Plug Domain DBQ26_03015 PF00593 TonB dependent receptor DBQ26_03020 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DBQ26_03025 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_03050 PF00290 Tryptophan synthase alpha chain DBQ26_03055 PF01039 Carboxyl transferase domain DBQ26_03060 PF02875 Mur ligase family, glutamate ligase domain DBQ26_03060 PF08245 Mur ligase middle domain DBQ26_03075 PF00753 Metallo-beta-lactamase superfamily DBQ26_03080 PF10417 C-terminal domain of 1-Cys peroxiredoxin DBQ26_03080 PF00578 AhpC/TSA family DBQ26_03085 PF02810 SEC-C motif DBQ26_03085 PF07517 SecA DEAD-like domain DBQ26_03085 PF01043 SecA preprotein cross-linking domain DBQ26_03085 PF07516 SecA Wing and Scaffold domain DBQ26_03095 PF00083 Sugar (and other) transporter DBQ26_03095 PF07690 Major Facilitator Superfamily DBQ26_03100 PF03006 Haemolysin-III related DBQ26_03110 PF13673 Acetyltransferase (GNAT) domain DBQ26_03125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DBQ26_03125 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_03125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DBQ26_03130 PF02803 Thiolase, C-terminal domain DBQ26_03130 PF00108 Thiolase, N-terminal domain DBQ26_03135 PF12833 Helix-turn-helix domain DBQ26_03135 PF02311 AraC-like ligand binding domain DBQ26_03140 PF02515 CoA-transferase family III DBQ26_03145 PF04966 Carbohydrate-selective porin, OprB family DBQ26_03150 PF01011 PQQ enzyme repeat DBQ26_03155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DBQ26_03155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DBQ26_03165 PF00893 Small Multidrug Resistance protein DBQ26_03175 PF00108 Thiolase, N-terminal domain DBQ26_03175 PF02803 Thiolase, C-terminal domain DBQ26_03180 PF07963 Prokaryotic N-terminal methylation motif DBQ26_03180 PF00114 Pilin (bacterial filament) DBQ26_03185 PF00691 OmpA family DBQ26_03185 PF13505 Outer membrane protein beta-barrel domain DBQ26_03190 PF01139 tRNA-splicing ligase RtcB DBQ26_03195 PF00324 Amino acid permease DBQ26_03200 PF05175 Methyltransferase small domain DBQ26_03200 PF08468 Methyltransferase small domain N-terminal DBQ26_03205 PF00860 Permease family DBQ26_03215 PF01741 Large-conductance mechanosensitive channel, MscL DBQ26_03230 PF06827 Zinc finger found in FPG and IleRS DBQ26_03230 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DBQ26_03230 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DBQ26_03235 PF02245 Methylpurine-DNA glycosylase (MPG) DBQ26_03240 PF07715 TonB-dependent Receptor Plug Domain DBQ26_03240 PF00593 TonB dependent receptor DBQ26_03245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DBQ26_03260 PF13098 Thioredoxin-like domain DBQ26_03260 PF10411 Disulfide bond isomerase protein N-terminus DBQ26_03265 PF01571 Aminomethyltransferase folate-binding domain DBQ26_03280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DBQ26_03280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DBQ26_03285 PF00860 Permease family DBQ26_03290 PF01613 Flavin reductase like domain DBQ26_03295 PF01042 Endoribonuclease L-PSP DBQ26_03300 PF00857 Isochorismatase family DBQ26_03305 PF00296 Luciferase-like monooxygenase DBQ26_03310 PF00881 Nitroreductase family DBQ26_03315 PF12697 Alpha/beta hydrolase family DBQ26_03320 PF04343 Protein of unknown function, DUF488 DBQ26_03325 PF08274 PhnA Zinc-Ribbon DBQ26_03325 PF03831 PhnA domain DBQ26_03330 PF07411 Domain of unknown function (DUF1508) DBQ26_03335 PF04073 Aminoacyl-tRNA editing domain DBQ26_03335 PF03129 Anticodon binding domain DBQ26_03335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DBQ26_03340 PF00873 AcrB/AcrD/AcrF family DBQ26_03355 PF00072 Response regulator receiver domain DBQ26_03360 PF00072 Response regulator receiver domain DBQ26_03365 PF01584 CheW-like domain DBQ26_03370 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DBQ26_03370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DBQ26_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_03375 PF00072 Response regulator receiver domain DBQ26_03375 PF01584 CheW-like domain DBQ26_03375 PF01627 Hpt domain DBQ26_03395 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_03395 PF13359 DDE superfamily endonuclease DBQ26_03405 PF07687 Peptidase dimerisation domain DBQ26_03405 PF01546 Peptidase family M20/M25/M40 DBQ26_03410 PF08085 Entericidin EcnA/B family DBQ26_03420 PF04304 Protein of unknown function (DUF454) DBQ26_03425 PF17969 L,D-transpeptidase C-terminal domain DBQ26_03425 PF03734 L,D-transpeptidase catalytic domain DBQ26_03465 PF00667 FAD binding domain DBQ26_03465 PF00258 Flavodoxin DBQ26_03465 PF00175 Oxidoreductase NAD-binding domain DBQ26_03475 PF12805 FUSC-like inner membrane protein yccS DBQ26_03480 PF07690 Major Facilitator Superfamily DBQ26_03485 PF00881 Nitroreductase family DBQ26_03505 PF01235 Sodium:alanine symporter family DBQ26_03510 PF01734 Patatin-like phospholipase DBQ26_03515 PF13291 ACT domain DBQ26_03515 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_03520 PF05992 SbmA/BacA-like family DBQ26_03525 PF05649 Peptidase family M13 DBQ26_03525 PF01431 Peptidase family M13 DBQ26_03550 PF02934 GatB/GatE catalytic domain DBQ26_03550 PF02637 GatB domain DBQ26_03555 PF01425 Amidase DBQ26_03560 PF02686 Glu-tRNAGln amidotransferase C subunit DBQ26_03570 PF04085 rod shape-determining protein MreC DBQ26_03575 PF04093 rod shape-determining protein MreD DBQ26_03580 PF02545 Maf-like protein DBQ26_03585 PF00575 S1 RNA binding domain DBQ26_03585 PF10150 Ribonuclease E/G family DBQ26_03595 PF06974 Protein of unknown function (DUF1298) DBQ26_03595 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DBQ26_03600 PF01507 Phosphoadenosine phosphosulfate reductase family DBQ26_03615 PF02525 Flavodoxin-like fold DBQ26_03635 PF02673 Bacitracin resistance protein BacA DBQ26_03640 PF12833 Helix-turn-helix domain DBQ26_03640 PF06719 AraC-type transcriptional regulator N-terminus DBQ26_03645 PF09277 Erythronolide synthase, docking DBQ26_03645 PF14765 Polyketide synthase dehydratase DBQ26_03645 PF00550 Phosphopantetheine attachment site DBQ26_03645 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_03645 PF08659 KR domain DBQ26_03645 PF02801 Beta-ketoacyl synthase, C-terminal domain DBQ26_03645 PF00698 Acyl transferase domain DBQ26_03645 PF00109 Beta-ketoacyl synthase, N-terminal domain DBQ26_03645 PF08990 Erythronolide synthase docking DBQ26_03645 PF16197 Ketoacyl-synthetase C-terminal extension DBQ26_03650 PF01965 DJ-1/PfpI family DBQ26_03670 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DBQ26_03675 PF09297 NADH pyrophosphatase zinc ribbon domain DBQ26_03675 PF00293 NUDIX domain DBQ26_03680 PF00324 Amino acid permease DBQ26_03685 PF04303 PrpF protein DBQ26_03690 PF00348 Polyprenyl synthetase DBQ26_03695 PF04237 YjbR DBQ26_03700 PF01145 SPFH domain / Band 7 family DBQ26_03710 PF01734 Patatin-like phospholipase DBQ26_03735 PF00884 Sulfatase DBQ26_03735 PF08019 Phosphoethanolamine transferase EptA/EptB DBQ26_03740 PF00486 Transcriptional regulatory protein, C terminal DBQ26_03740 PF00072 Response regulator receiver domain DBQ26_03745 PF08521 Two-component sensor kinase N-terminal DBQ26_03745 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_03755 PF00909 Ammonium Transporter Family DBQ26_03760 PF03466 LysR substrate binding domain DBQ26_03760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_03785 PF13359 DDE superfamily endonuclease DBQ26_03785 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_03795 PF00133 tRNA synthetases class I (I, L, M and V) DBQ26_03795 PF10458 Valyl tRNA synthetase tRNA binding arm DBQ26_03795 PF08264 Anticodon-binding domain of tRNA DBQ26_03815 PF01906 Putative heavy-metal-binding DBQ26_03820 PF01906 Putative heavy-metal-binding DBQ26_03825 PF02321 Outer membrane efflux protein DBQ26_03830 PF00873 AcrB/AcrD/AcrF family DBQ26_03835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DBQ26_03835 PF00529 HlyD membrane-fusion protein of T1SS DBQ26_03840 PF01569 PAP2 superfamily DBQ26_03850 PF00348 Polyprenyl synthetase DBQ26_03855 PF00829 Ribosomal prokaryotic L21 protein DBQ26_03860 PF01016 Ribosomal L27 protein DBQ26_03865 PF03548 Outer membrane lipoprotein carrier protein LolA DBQ26_03875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DBQ26_03875 PF02403 Seryl-tRNA synthetase N-terminal domain DBQ26_03880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DBQ26_03880 PF14824 Sirohaem biosynthesis protein central DBQ26_03880 PF10414 Sirohaem synthase dimerisation region DBQ26_03885 PF00588 SpoU rRNA Methylase family DBQ26_03900 PF00872 Transposase, Mutator family DBQ26_03925 PF03358 NADPH-dependent FMN reductase DBQ26_03930 PF13520 Amino acid permease DBQ26_03935 PF00465 Iron-containing alcohol dehydrogenase DBQ26_03945 PF03099 Biotin/lipoate A/B protein ligase family DBQ26_03950 PF04359 Protein of unknown function (DUF493) DBQ26_03955 PF04542 Sigma-70 region 2 DBQ26_03955 PF03979 Sigma-70 factor, region 1.1 DBQ26_03955 PF04539 Sigma-70 region 3 DBQ26_03955 PF04546 Sigma-70, non-essential region DBQ26_03955 PF00140 Sigma-70 factor, region 1.2 DBQ26_03955 PF04545 Sigma-70, region 4 DBQ26_03985 PF00285 Citrate synthase, C-terminal domain DBQ26_03995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DBQ26_04000 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DBQ26_04005 PF00890 FAD binding domain DBQ26_04005 PF02910 Fumarate reductase flavoprotein C-term DBQ26_04010 PF13085 2Fe-2S iron-sulfur cluster binding domain DBQ26_04025 PF02779 Transketolase, pyrimidine binding domain DBQ26_04025 PF16870 2-oxoglutarate dehydrogenase C-terminal DBQ26_04025 PF00676 Dehydrogenase E1 component DBQ26_04025 PF16078 2-oxoglutarate dehydrogenase N-terminus DBQ26_04030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DBQ26_04030 PF00364 Biotin-requiring enzyme DBQ26_04030 PF02817 e3 binding domain DBQ26_04035 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_04035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DBQ26_04040 PF00549 CoA-ligase DBQ26_04040 PF08442 ATP-grasp domain DBQ26_04045 PF02629 CoA binding domain DBQ26_04045 PF00549 CoA-ligase DBQ26_04050 PF00579 tRNA synthetases class I (W and Y) DBQ26_04055 PF05661 Protein of unknown function (DUF808) DBQ26_04060 PF04228 Putative neutral zinc metallopeptidase DBQ26_04065 PF00999 Sodium/hydrogen exchanger family DBQ26_04080 PF09587 Bacterial capsule synthesis protein PGA_cap DBQ26_04090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DBQ26_04095 PF00582 Universal stress protein family DBQ26_04100 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_04105 PF01042 Endoribonuclease L-PSP DBQ26_04110 PF00440 Bacterial regulatory proteins, tetR family DBQ26_04115 PF03449 Transcription elongation factor, N-terminal DBQ26_04115 PF01272 Transcription elongation factor, GreA/GreB, C-term DBQ26_04120 PF02142 MGS-like domain DBQ26_04120 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DBQ26_04120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DBQ26_04125 PF00117 Glutamine amidotransferase class-I DBQ26_04125 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DBQ26_04150 PF01985 CRS1 / YhbY (CRM) domain DBQ26_04155 PF01728 FtsJ-like methyltransferase DBQ26_04160 PF17862 AAA+ lid domain DBQ26_04160 PF01434 Peptidase family M41 DBQ26_04160 PF06480 FtsH Extracellular DBQ26_04160 PF00004 ATPase family associated with various cellular activities (AAA) DBQ26_04165 PF00809 Pterin binding enzyme DBQ26_04185 PF16655 PhoD-like phosphatase, N-terminal domain DBQ26_04185 PF09423 PhoD-like phosphatase DBQ26_04200 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DBQ26_04200 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DBQ26_04220 PF00083 Sugar (and other) transporter DBQ26_04225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DBQ26_04225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DBQ26_04230 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DBQ26_04230 PF01266 FAD dependent oxidoreductase DBQ26_04235 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DBQ26_04235 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DBQ26_04240 PF00781 Diacylglycerol kinase catalytic domain DBQ26_04245 PF00149 Calcineurin-like phosphoesterase DBQ26_04255 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_04255 PF13359 DDE superfamily endonuclease DBQ26_04270 PF00166 Chaperonin 10 Kd subunit DBQ26_04275 PF00118 TCP-1/cpn60 chaperonin family DBQ26_04315 PF12684 PDDEXK-like domain of unknown function (DUF3799) DBQ26_04315 PF06630 Enterobacterial exodeoxyribonuclease VIII DBQ26_04380 PF03796 DnaB-like helicase C terminal domain DBQ26_04380 PF00772 DnaB-like helicase N terminal domain DBQ26_04450 PF10668 Phage terminase small subunit DBQ26_04450 PF03592 Terminase small subunit DBQ26_04560 PF13356 Arm DNA-binding domain DBQ26_04560 PF00589 Phage integrase family DBQ26_04565 PF01219 Prokaryotic diacylglycerol kinase DBQ26_04575 PF03009 Glycerophosphoryl diester phosphodiesterase family DBQ26_04580 PF00873 AcrB/AcrD/AcrF family DBQ26_04590 PF01435 Peptidase family M48 DBQ26_04595 PF01464 Transglycosylase SLT domain DBQ26_04605 PF01171 PP-loop family DBQ26_04615 PF00497 Bacterial extracellular solute-binding proteins, family 3 DBQ26_04615 PF01464 Transglycosylase SLT domain DBQ26_04620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DBQ26_04620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DBQ26_04625 PF03449 Transcription elongation factor, N-terminal DBQ26_04625 PF01272 Transcription elongation factor, GreA/GreB, C-term DBQ26_04635 PF03180 NLPA lipoprotein DBQ26_04650 PF13359 DDE superfamily endonuclease DBQ26_04650 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_04680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DBQ26_04680 PF00529 HlyD membrane-fusion protein of T1SS DBQ26_04685 PF00873 AcrB/AcrD/AcrF family DBQ26_04690 PF00881 Nitroreductase family DBQ26_04695 PF00106 short chain dehydrogenase DBQ26_04705 PF02595 Glycerate kinase family DBQ26_04710 PF00384 Molybdopterin oxidoreductase DBQ26_04715 PF02634 FdhD/NarQ family DBQ26_04725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DBQ26_04725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DBQ26_04725 PF11890 Domain of unknown function (DUF3410) DBQ26_04730 PF00152 tRNA synthetases class II (D, K and N) DBQ26_04740 PF18073 Rubredoxin metal binding domain DBQ26_04745 PF01235 Sodium:alanine symporter family DBQ26_04750 PF00324 Amino acid permease DBQ26_04760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DBQ26_04760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DBQ26_04765 PF01678 Diaminopimelate epimerase DBQ26_04770 PF01810 LysE type translocator DBQ26_04775 PF02899 Phage integrase, N-terminal SAM-like domain DBQ26_04775 PF00589 Phage integrase family DBQ26_04780 PF01012 Electron transfer flavoprotein domain DBQ26_04785 PF01012 Electron transfer flavoprotein domain DBQ26_04785 PF00766 Electron transfer flavoprotein FAD-binding domain DBQ26_04790 PF00521 DNA gyrase/topoisomerase IV, subunit A DBQ26_04790 PF03989 DNA gyrase C-terminal domain, beta-propeller DBQ26_04805 PF13533 Biotin-lipoyl like DBQ26_04815 PF00266 Aminotransferase class-V DBQ26_04825 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DBQ26_04835 PF12704 MacB-like periplasmic core domain DBQ26_04835 PF02687 FtsX-like permease family DBQ26_04840 PF00005 ABC transporter DBQ26_04850 PF00872 Transposase, Mutator family DBQ26_04865 PF06965 Na+/H+ antiporter 1 DBQ26_04865 PF01343 Peptidase family S49 DBQ26_04870 PF12697 Alpha/beta hydrolase family DBQ26_04875 PF00551 Formyl transferase DBQ26_04880 PF00586 AIR synthase related protein, N-terminal domain DBQ26_04880 PF02769 AIR synthase related protein, C-terminal domain DBQ26_04885 PF01594 AI-2E family transporter DBQ26_04890 PF11638 DnaA N-terminal domain DBQ26_04890 PF08299 Bacterial dnaA protein helix-turn-helix DBQ26_04890 PF00308 Bacterial dnaA protein DBQ26_04925 PF00588 SpoU rRNA Methylase family DBQ26_04925 PF08032 RNA 2'-O ribose methyltransferase substrate binding DBQ26_04930 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DBQ26_04940 PF00691 OmpA family DBQ26_04945 PF07676 WD40-like Beta Propeller Repeat DBQ26_04945 PF04052 TolB amino-terminal domain DBQ26_04955 PF02472 Biopolymer transport protein ExbD/TolR DBQ26_04960 PF01618 MotA/TolQ/ExbB proton channel family DBQ26_04965 PF03061 Thioesterase superfamily DBQ26_04970 PF01546 Peptidase family M20/M25/M40 DBQ26_04970 PF07687 Peptidase dimerisation domain DBQ26_04975 PF05496 Holliday junction DNA helicase RuvB P-loop domain DBQ26_04975 PF17864 RuvB AAA lid domain DBQ26_04975 PF05491 RuvB C-terminal winged helix domain DBQ26_04980 PF07499 RuvA, C-terminal domain DBQ26_04980 PF01330 RuvA N terminal domain DBQ26_04990 PF01966 HD domain DBQ26_04995 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DBQ26_04995 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DBQ26_04995 PF02769 AIR synthase related protein, C-terminal domain DBQ26_05000 PF07690 Major Facilitator Superfamily DBQ26_05005 PF01784 NIF3 (NGG1p interacting factor 3) DBQ26_05010 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_05015 PF00293 NUDIX domain DBQ26_05015 PF01467 Cytidylyltransferase-like DBQ26_05030 PF00578 AhpC/TSA family DBQ26_05045 PF06508 Queuosine biosynthesis protein QueC DBQ26_05055 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DBQ26_05055 PF14602 Hexapeptide repeat of succinyl-transferase DBQ26_05055 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_05065 PF03466 LysR substrate binding domain DBQ26_05070 PF00005 ABC transporter DBQ26_05070 PF12857 TOBE-like domain DBQ26_05075 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_05080 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_05095 PF01063 Amino-transferase class IV DBQ26_05100 PF02618 YceG-like family DBQ26_05105 PF02223 Thymidylate kinase DBQ26_05115 PF02910 Fumarate reductase flavoprotein C-term DBQ26_05115 PF00890 FAD binding domain DBQ26_05120 PF13180 PDZ domain DBQ26_05135 PF00679 Elongation factor G C-terminus DBQ26_05135 PF00009 Elongation factor Tu GTP binding domain DBQ26_05135 PF06421 GTP-binding protein LepA C-terminus DBQ26_05135 PF03144 Elongation factor Tu domain 2 DBQ26_05140 PF10502 Signal peptidase, peptidase S26 DBQ26_05150 PF14622 Ribonuclease-III-like DBQ26_05150 PF00035 Double-stranded RNA binding motif DBQ26_05155 PF01926 50S ribosome-binding GTPase DBQ26_05155 PF07650 KH domain DBQ26_05165 PF11967 Recombination protein O N terminal DBQ26_05165 PF02565 Recombination protein O C terminal DBQ26_05170 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DBQ26_05175 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DBQ26_05180 PF00106 short chain dehydrogenase DBQ26_05205 PF00892 EamA-like transporter family DBQ26_05220 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_05220 PF17151 Periplasmic sensor domain DBQ26_05230 PF00271 Helicase conserved C-terminal domain DBQ26_05230 PF12344 Ultra-violet resistance protein B DBQ26_05230 PF17757 UvrB interaction domain DBQ26_05230 PF04851 Type III restriction enzyme, res subunit DBQ26_05230 PF02151 UvrB/uvrC motif DBQ26_05240 PF00892 EamA-like transporter family DBQ26_05245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DBQ26_05245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DBQ26_05260 PF01018 GTP1/OBG DBQ26_05260 PF01926 50S ribosome-binding GTPase DBQ26_05265 PF00696 Amino acid kinase family DBQ26_05265 PF01472 PUA domain DBQ26_05275 PF07759 Protein of unknown function (DUF1615) DBQ26_05280 PF01207 Dihydrouridine synthase (Dus) DBQ26_05285 PF03060 Nitronate monooxygenase DBQ26_05300 PF02350 UDP-N-acetylglucosamine 2-epimerase DBQ26_05330 PF03441 FAD binding domain of DNA photolyase DBQ26_05330 PF00875 DNA photolyase DBQ26_05335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DBQ26_05340 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_05345 PF00768 D-alanyl-D-alanine carboxypeptidase DBQ26_05345 PF07943 Penicillin-binding protein 5, C-terminal domain DBQ26_05355 PF00872 Transposase, Mutator family DBQ26_05360 PF03971 Monomeric isocitrate dehydrogenase DBQ26_05365 PF00849 RNA pseudouridylate synthase DBQ26_05370 PF00180 Isocitrate/isopropylmalate dehydrogenase DBQ26_05380 PF06779 Uncharacterised MFS-type transporter YbfB DBQ26_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_05385 PF03466 LysR substrate binding domain DBQ26_05395 PF02567 Phenazine biosynthesis-like protein DBQ26_05400 PF00675 Insulinase (Peptidase family M16) DBQ26_05400 PF05193 Peptidase M16 inactive domain DBQ26_05425 PF02581 Thiamine monophosphate synthase DBQ26_05430 PF00202 Aminotransferase class-III DBQ26_05440 PF00849 RNA pseudouridylate synthase DBQ26_05445 PF18337 RapA N-terminal Tudor like domain DBQ26_05445 PF00271 Helicase conserved C-terminal domain DBQ26_05445 PF18339 RapA N-terminal Tudor like domain 1 DBQ26_05445 PF12137 RNA polymerase recycling family C-terminal DBQ26_05445 PF00176 SNF2 family N-terminal domain DBQ26_05455 PF00440 Bacterial regulatory proteins, tetR family DBQ26_05460 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_05460 PF00970 Oxidoreductase FAD-binding domain DBQ26_05460 PF00175 Oxidoreductase NAD-binding domain DBQ26_05465 PF00487 Fatty acid desaturase DBQ26_05475 PF00202 Aminotransferase class-III DBQ26_05480 PF00282 Pyridoxal-dependent decarboxylase conserved domain DBQ26_05485 PF00171 Aldehyde dehydrogenase family DBQ26_05490 PF01037 Lrp/AsnC ligand binding domain DBQ26_05495 PF00205 Thiamine pyrophosphate enzyme, central domain DBQ26_05495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DBQ26_05495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DBQ26_05500 PF00324 Amino acid permease DBQ26_05505 PF12849 PBP superfamily domain DBQ26_05510 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_05515 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_05520 PF00005 ABC transporter DBQ26_05525 PF01343 Peptidase family S49 DBQ26_05525 PF08496 Peptidase family S49 N-terminal DBQ26_05540 PF08328 Adenylosuccinate lyase C-terminal DBQ26_05540 PF00206 Lyase DBQ26_05545 PF04356 Protein of unknown function (DUF489) DBQ26_05555 PF00293 NUDIX domain DBQ26_05555 PF13344 Haloacid dehalogenase-like hydrolase DBQ26_05560 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_05565 PF00768 D-alanyl-D-alanine carboxypeptidase DBQ26_05565 PF07943 Penicillin-binding protein 5, C-terminal domain DBQ26_05580 PF01975 Survival protein SurE DBQ26_05585 PF01551 Peptidase family M23 DBQ26_05585 PF01476 LysM domain DBQ26_05590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_05590 PF03466 LysR substrate binding domain DBQ26_05595 PF13654 AAA domain DBQ26_05595 PF05362 Lon protease (S16) C-terminal proteolytic domain DBQ26_05600 PF07690 Major Facilitator Superfamily DBQ26_05605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DBQ26_05610 PF13593 SBF-like CPA transporter family (DUF4137) DBQ26_05615 PF01197 Ribosomal protein L31 DBQ26_05630 PF04055 Radical SAM superfamily DBQ26_05635 PF01132 Elongation factor P (EF-P) OB domain DBQ26_05635 PF09285 Elongation factor P, C-terminal DBQ26_05635 PF08207 Elongation factor P (EF-P) KOW-like domain DBQ26_05640 PF02554 Carbon starvation protein CstA DBQ26_05640 PF13722 5TM C-terminal transporter carbon starvation CstA DBQ26_05645 PF04328 Selenoprotein, putative DBQ26_05655 PF00589 Phage integrase family DBQ26_05710 PF04945 YHS domain DBQ26_05715 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_05715 PF00672 HAMP domain DBQ26_05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_05720 PF00072 Response regulator receiver domain DBQ26_05720 PF00486 Transcriptional regulatory protein, C terminal DBQ26_05730 PF07731 Multicopper oxidase DBQ26_05730 PF00394 Multicopper oxidase DBQ26_05730 PF07732 Multicopper oxidase DBQ26_05750 PF02560 Cyanate lyase C-terminal domain DBQ26_05755 PF01226 Formate/nitrite transporter DBQ26_05760 PF00069 Protein kinase domain DBQ26_05780 PF00872 Transposase, Mutator family DBQ26_05795 PF04909 Amidohydrolase DBQ26_05815 PF01144 Coenzyme A transferase DBQ26_05820 PF01144 Coenzyme A transferase DBQ26_05825 PF02803 Thiolase, C-terminal domain DBQ26_05825 PF00108 Thiolase, N-terminal domain DBQ26_05830 PF02426 Muconolactone delta-isomerase DBQ26_05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_05840 PF03466 LysR substrate binding domain DBQ26_05860 PF00883 Cytosol aminopeptidase family, catalytic domain DBQ26_05860 PF02789 Cytosol aminopeptidase family, N-terminal domain DBQ26_05880 PF13193 AMP-binding enzyme C-terminal domain DBQ26_05880 PF00501 AMP-binding enzyme DBQ26_05880 PF00550 Phosphopantetheine attachment site DBQ26_05880 PF00668 Condensation domain DBQ26_05885 PF00501 AMP-binding enzyme DBQ26_05885 PF13193 AMP-binding enzyme C-terminal domain DBQ26_05885 PF00975 Thioesterase domain DBQ26_05885 PF00668 Condensation domain DBQ26_05885 PF00550 Phosphopantetheine attachment site DBQ26_05890 PF01032 FecCD transport family DBQ26_05895 PF01032 FecCD transport family DBQ26_05900 PF00005 ABC transporter DBQ26_05905 PF01497 Periplasmic binding protein DBQ26_05910 PF00593 TonB dependent receptor DBQ26_05910 PF07715 TonB-dependent Receptor Plug Domain DBQ26_05915 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DBQ26_05920 PF00550 Phosphopantetheine attachment site DBQ26_05920 PF00668 Condensation domain DBQ26_05920 PF00501 AMP-binding enzyme DBQ26_05925 PF13193 AMP-binding enzyme C-terminal domain DBQ26_05925 PF00501 AMP-binding enzyme DBQ26_05930 PF00857 Isochorismatase family DBQ26_05930 PF00550 Phosphopantetheine attachment site DBQ26_05935 PF00282 Pyridoxal-dependent decarboxylase conserved domain DBQ26_05945 PF00005 ABC transporter DBQ26_05945 PF00664 ABC transporter transmembrane region DBQ26_05950 PF00664 ABC transporter transmembrane region DBQ26_05950 PF00005 ABC transporter DBQ26_05955 PF00975 Thioesterase domain DBQ26_05965 PF00425 chorismate binding enzyme DBQ26_05980 PF01208 Uroporphyrinogen decarboxylase (URO-D) DBQ26_05985 PF05675 Protein of unknown function (DUF817) DBQ26_06000 PF00144 Beta-lactamase DBQ26_06005 PF01227 GTP cyclohydrolase I DBQ26_06010 PF01799 [2Fe-2S] binding domain DBQ26_06010 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_06015 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DBQ26_06015 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DBQ26_06025 PF01713 Smr domain DBQ26_06030 PF00218 Indole-3-glycerol phosphate synthase DBQ26_06035 PF00591 Glycosyl transferase family, a/b domain DBQ26_06035 PF02885 Glycosyl transferase family, helical bundle domain DBQ26_06040 PF00593 TonB dependent receptor DBQ26_06040 PF07715 TonB-dependent Receptor Plug Domain DBQ26_06045 PF01433 Peptidase family M1 domain DBQ26_06045 PF11838 ERAP1-like C-terminal domain DBQ26_06050 PF00117 Glutamine amidotransferase class-I DBQ26_06060 PF00854 POT family DBQ26_06070 PF04345 Chorismate lyase DBQ26_06075 PF01040 UbiA prenyltransferase family DBQ26_06110 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DBQ26_06110 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DBQ26_06115 PF01784 NIF3 (NGG1p interacting factor 3) DBQ26_06120 PF13180 PDZ domain DBQ26_06125 PF01743 Poly A polymerase head domain DBQ26_06125 PF12627 Probable RNA and SrmB- binding site of polymerase A DBQ26_06130 PF03949 Malic enzyme, NAD binding domain DBQ26_06130 PF01515 Phosphate acetyl/butaryl transferase DBQ26_06130 PF00390 Malic enzyme, N-terminal domain DBQ26_06135 PF03707 Bacterial signalling protein N terminal repeat DBQ26_06135 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_06135 PF00563 EAL domain DBQ26_06140 PF04452 RNA methyltransferase DBQ26_06145 PF02219 Methylenetetrahydrofolate reductase DBQ26_06150 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DBQ26_06150 PF05221 S-adenosyl-L-homocysteine hydrolase DBQ26_06165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_06165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_06165 PF09317 Domain of unknown function (DUF1974) DBQ26_06165 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_06170 PF04055 Radical SAM superfamily DBQ26_06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_06175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DBQ26_06185 PF07690 Major Facilitator Superfamily DBQ26_06195 PF00557 Metallopeptidase family M24 DBQ26_06200 PF00318 Ribosomal protein S2 DBQ26_06205 PF00889 Elongation factor TS DBQ26_06215 PF12833 Helix-turn-helix domain DBQ26_06235 PF03330 Lytic transglycolase DBQ26_06235 PF05036 Sporulation related domain DBQ26_06240 PF13406 Transglycosylase SLT domain DBQ26_06245 PF01098 Cell cycle protein DBQ26_06255 PF14489 QueF-like protein DBQ26_06255 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DBQ26_06260 PF01061 ABC-2 type transporter DBQ26_06265 PF00005 ABC transporter DBQ26_06270 PF00589 Phage integrase family DBQ26_06310 PF03592 Terminase small subunit DBQ26_06310 PF10668 Phage terminase small subunit DBQ26_06435 PF02463 RecF/RecN/SMC N terminal domain DBQ26_06520 PF00464 Serine hydroxymethyltransferase DBQ26_06525 PF02321 Outer membrane efflux protein DBQ26_06530 PF00873 AcrB/AcrD/AcrF family DBQ26_06535 PF13533 Biotin-lipoyl like DBQ26_06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_06540 PF03466 LysR substrate binding domain DBQ26_06545 PF00497 Bacterial extracellular solute-binding proteins, family 3 DBQ26_06550 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_06555 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_06560 PF00005 ABC transporter DBQ26_06565 PF00893 Small Multidrug Resistance protein DBQ26_06570 PF00037 4Fe-4S binding domain DBQ26_06580 PF00392 Bacterial regulatory proteins, gntR family DBQ26_06580 PF00155 Aminotransferase class I and II DBQ26_06585 PF02567 Phenazine biosynthesis-like protein DBQ26_06590 PF00970 Oxidoreductase FAD-binding domain DBQ26_06590 PF00175 Oxidoreductase NAD-binding domain DBQ26_06595 PF18389 TrmO C-terminal domain DBQ26_06595 PF01980 tRNA-methyltransferase O DBQ26_06605 PF00437 Type II/IV secretion system protein DBQ26_06610 PF04076 Bacterial OB fold (BOF) protein DBQ26_06615 PF00072 Response regulator receiver domain DBQ26_06615 PF00486 Transcriptional regulatory protein, C terminal DBQ26_06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_06620 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_06620 PF08521 Two-component sensor kinase N-terminal DBQ26_06630 PF00293 NUDIX domain DBQ26_06640 PF14814 Bifunctional transglycosylase second domain DBQ26_06640 PF00912 Transglycosylase DBQ26_06640 PF00905 Penicillin binding protein transpeptidase domain DBQ26_06645 PF01513 ATP-NAD kinase DBQ26_06650 PF07023 Protein of unknown function (DUF1315) DBQ26_06655 PF02885 Glycosyl transferase family, helical bundle domain DBQ26_06655 PF00591 Glycosyl transferase family, a/b domain DBQ26_06665 PF00375 Sodium:dicarboxylate symporter family DBQ26_06670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_06670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_06670 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_06685 PF01817 Chorismate mutase type II DBQ26_06685 PF01842 ACT domain DBQ26_06685 PF00800 Prephenate dehydratase DBQ26_06690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DBQ26_06700 PF03781 Sulfatase-modifying factor enzyme 1 DBQ26_06705 PF07687 Peptidase dimerisation domain DBQ26_06705 PF01546 Peptidase family M20/M25/M40 DBQ26_06710 PF01137 RNA 3'-terminal phosphate cyclase DBQ26_06710 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain DBQ26_06725 PF01139 tRNA-splicing ligase RtcB DBQ26_06735 PF00158 Sigma-54 interaction domain DBQ26_06735 PF06956 Regulator of RNA terminal phosphate cyclase DBQ26_06745 PF03883 Peroxide stress protein YaaA DBQ26_06750 PF05690 Thiazole biosynthesis protein ThiG DBQ26_06760 PF04241 Protein of unknown function (DUF423) DBQ26_06765 PF04542 Sigma-70 region 2 DBQ26_06765 PF04545 Sigma-70, region 4 DBQ26_06765 PF00140 Sigma-70 factor, region 1.2 DBQ26_06775 PF00313 'Cold-shock' DNA-binding domain DBQ26_06780 PF00270 DEAD/DEAH box helicase DBQ26_06780 PF00271 Helicase conserved C-terminal domain DBQ26_06790 PF00881 Nitroreductase family DBQ26_06795 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DBQ26_06795 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DBQ26_06815 PF01180 Dihydroorotate dehydrogenase DBQ26_06820 PF02674 Colicin V production protein DBQ26_06825 PF00156 Phosphoribosyl transferase domain DBQ26_06840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DBQ26_06840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DBQ26_06845 PF01435 Peptidase family M48 DBQ26_06850 PF09424 Yqey-like protein DBQ26_06855 PF01165 Ribosomal protein S21 DBQ26_06860 PF00814 Glycoprotease family DBQ26_06880 PF00069 Protein kinase domain DBQ26_06880 PF03793 PASTA domain DBQ26_06905 PF00313 'Cold-shock' DNA-binding domain DBQ26_06920 PF00561 alpha/beta hydrolase fold DBQ26_06925 PF03616 Sodium/glutamate symporter DBQ26_06930 PF00999 Sodium/hydrogen exchanger family DBQ26_06930 PF02254 TrkA-N domain DBQ26_06995 PF00440 Bacterial regulatory proteins, tetR family DBQ26_07000 PF00155 Aminotransferase class I and II DBQ26_07005 PF02080 TrkA-C domain DBQ26_07005 PF06826 Predicted Permease Membrane Region DBQ26_07015 PF04403 Paraquat-inducible protein A DBQ26_07020 PF02470 MlaD protein DBQ26_07030 PF00576 HIUase/Transthyretin family DBQ26_07040 PF00486 Transcriptional regulatory protein, C terminal DBQ26_07040 PF00072 Response regulator receiver domain DBQ26_07045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_07045 PF00672 HAMP domain DBQ26_07045 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_07085 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_07085 PF08521 Two-component sensor kinase N-terminal DBQ26_07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_07090 PF00072 Response regulator receiver domain DBQ26_07090 PF00486 Transcriptional regulatory protein, C terminal DBQ26_07105 PF01177 Asp/Glu/Hydantoin racemase DBQ26_07115 PF07995 Glucose / Sorbosone dehydrogenase DBQ26_07135 PF00375 Sodium:dicarboxylate symporter family DBQ26_07145 PF16123 Hydroxyacylglutathione hydrolase C-terminus DBQ26_07145 PF00753 Metallo-beta-lactamase superfamily DBQ26_07150 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_07155 PF00005 ABC transporter DBQ26_07155 PF09383 NIL domain DBQ26_07160 PF03180 NLPA lipoprotein DBQ26_07165 PF02844 Phosphoribosylglycinamide synthetase, N domain DBQ26_07165 PF02843 Phosphoribosylglycinamide synthetase, C domain DBQ26_07165 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DBQ26_07170 PF02142 MGS-like domain DBQ26_07170 PF01808 AICARFT/IMPCHase bienzyme DBQ26_07175 PF02954 Bacterial regulatory protein, Fis family DBQ26_07195 PF13932 GidA associated domain DBQ26_07195 PF01134 Glucose inhibited division protein A DBQ26_07205 PF14403 Circularly permuted ATP-grasp type 2 DBQ26_07215 PF08379 Bacterial transglutaminase-like N-terminal region DBQ26_07215 PF01841 Transglutaminase-like superfamily DBQ26_07225 PF01168 Alanine racemase, N-terminal domain DBQ26_07225 PF00842 Alanine racemase, C-terminal domain DBQ26_07230 PF00772 DnaB-like helicase N terminal domain DBQ26_07230 PF03796 DnaB-like helicase C terminal domain DBQ26_07235 PF03948 Ribosomal protein L9, C-terminal domain DBQ26_07235 PF01281 Ribosomal protein L9, N-terminal domain DBQ26_07240 PF01084 Ribosomal protein S18 DBQ26_07245 PF01250 Ribosomal protein S6 DBQ26_07250 PF01040 UbiA prenyltransferase family DBQ26_07255 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DBQ26_07260 PF00510 Cytochrome c oxidase subunit III DBQ26_07265 PF00115 Cytochrome C and Quinol oxidase polypeptide I DBQ26_07270 PF06481 COX Aromatic Rich Motif DBQ26_07270 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DBQ26_07280 PF02896 PEP-utilising enzyme, TIM barrel domain DBQ26_07280 PF00391 PEP-utilising enzyme, mobile domain DBQ26_07280 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DBQ26_07285 PF03618 Kinase/pyrophosphorylase DBQ26_07295 PF14883 Hypothetical glycosyl hydrolase family 13 DBQ26_07295 PF01522 Polysaccharide deacetylase DBQ26_07300 PF00535 Glycosyl transferase family 2 DBQ26_07305 PF13994 PgaD-like protein DBQ26_07315 PF00296 Luciferase-like monooxygenase DBQ26_07330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_07330 PF03466 LysR substrate binding domain DBQ26_07340 PF03462 PCRF domain DBQ26_07340 PF00472 RF-1 domain DBQ26_07345 PF17827 PrmC N-terminal domain DBQ26_07345 PF13847 Methyltransferase domain DBQ26_07350 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_07355 PF09084 NMT1/THI5 like DBQ26_07360 PF12833 Helix-turn-helix domain DBQ26_07365 PF00106 short chain dehydrogenase DBQ26_07370 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_07370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_07370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_07375 PF01613 Flavin reductase like domain DBQ26_07380 PF00899 ThiF family DBQ26_07385 PF03109 ABC1 family DBQ26_07390 PF02152 Dihydroneopterin aldolase DBQ26_07400 PF03814 Potassium-transporting ATPase A subunit DBQ26_07410 PF02669 K+-transporting ATPase, c chain DBQ26_07415 PF02702 Osmosensitive K+ channel His kinase sensor domain DBQ26_07415 PF13493 Domain of unknown function (DUF4118) DBQ26_07415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_07415 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_07420 PF00486 Transcriptional regulatory protein, C terminal DBQ26_07420 PF00072 Response regulator receiver domain DBQ26_07425 PF00120 Glutamine synthetase, catalytic domain DBQ26_07435 PF03232 Ubiquinone biosynthesis protein COQ7 DBQ26_07440 PF07690 Major Facilitator Superfamily DBQ26_07445 PF01103 Surface antigen DBQ26_07445 PF07244 Surface antigen variable number repeat DBQ26_07445 PF17243 POTRA domain TamA domain 1 DBQ26_07470 PF00330 Aconitase family (aconitate hydratase) DBQ26_07470 PF06434 Aconitate hydratase 2 N-terminus DBQ26_07470 PF11791 Aconitate B N-terminal domain DBQ26_07480 PF00939 Sodium:sulfate symporter transmembrane region DBQ26_07490 PF00027 Cyclic nucleotide-binding domain DBQ26_07490 PF00520 Ion transport protein DBQ26_07495 PF07690 Major Facilitator Superfamily DBQ26_07520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_07520 PF03466 LysR substrate binding domain DBQ26_07525 PF04284 Protein of unknown function (DUF441) DBQ26_07535 PF01479 S4 domain DBQ26_07535 PF00849 RNA pseudouridylate synthase DBQ26_07550 PF01479 S4 domain DBQ26_07550 PF00849 RNA pseudouridylate synthase DBQ26_07555 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DBQ26_07560 PF01119 DNA mismatch repair protein, C-terminal domain DBQ26_07560 PF08676 MutL C terminal dimerisation domain DBQ26_07570 PF17209 Hfq protein DBQ26_07580 PF00881 Nitroreductase family DBQ26_07590 PF00149 Calcineurin-like phosphoesterase DBQ26_07595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DBQ26_07600 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DBQ26_07600 PF00749 tRNA synthetases class I (E and Q), catalytic domain DBQ26_07605 PF00117 Glutamine amidotransferase class-I DBQ26_07605 PF00958 GMP synthase C terminal domain DBQ26_07605 PF02540 NAD synthase DBQ26_07610 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DBQ26_07615 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DBQ26_07620 PF13520 Amino acid permease DBQ26_07625 PF00171 Aldehyde dehydrogenase family DBQ26_07640 PF00465 Iron-containing alcohol dehydrogenase DBQ26_07645 PF14493 Helix-turn-helix domain DBQ26_07645 PF05970 PIF1-like helicase DBQ26_07655 PF02110 Hydroxyethylthiazole kinase family DBQ26_07670 PF11940 Domain of unknown function (DUF3458) Ig-like fold DBQ26_07670 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DBQ26_07670 PF01433 Peptidase family M1 domain DBQ26_07685 PF13953 PapC C-terminal domain DBQ26_07685 PF00577 Outer membrane usher protein DBQ26_07685 PF13954 PapC N-terminal domain DBQ26_07710 PF01817 Chorismate mutase type II DBQ26_07720 PF00593 TonB dependent receptor DBQ26_07720 PF07660 Secretin and TonB N terminus short domain DBQ26_07720 PF07715 TonB-dependent Receptor Plug Domain DBQ26_07730 PF13359 DDE superfamily endonuclease DBQ26_07730 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_07735 PF07715 TonB-dependent Receptor Plug Domain DBQ26_07735 PF00593 TonB dependent receptor DBQ26_07740 PF13737 Transposase DDE domain DBQ26_07745 PF18331 PKHD-type hydroxylase C-terminal domain DBQ26_07745 PF13640 2OG-Fe(II) oxygenase superfamily DBQ26_07760 PF00117 Glutamine amidotransferase class-I DBQ26_07795 PF00959 Phage lysozyme DBQ26_07820 PF03466 LysR substrate binding domain DBQ26_07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_07850 PF04151 Bacterial pre-peptidase C-terminal domain DBQ26_07855 PF12848 ABC transporter DBQ26_07855 PF00005 ABC transporter DBQ26_07860 PF00582 Universal stress protein family DBQ26_07870 PF13737 Transposase DDE domain DBQ26_07885 PF03594 Benzoate membrane transport protein DBQ26_07890 PF01037 Lrp/AsnC ligand binding domain DBQ26_07895 PF01810 LysE type translocator DBQ26_07905 PF03466 LysR substrate binding domain DBQ26_07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_07915 PF02803 Thiolase, C-terminal domain DBQ26_07915 PF00108 Thiolase, N-terminal domain DBQ26_07940 PF07690 Major Facilitator Superfamily DBQ26_07955 PF12169 DNA polymerase III subunits gamma and tau domain III DBQ26_07955 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DBQ26_07955 PF12170 DNA polymerase III tau subunit V interacting with alpha DBQ26_07960 PF05506 Domain of unknown function (DUF756) DBQ26_07960 PF04185 Phosphoesterase family DBQ26_07965 PF03061 Thioesterase superfamily DBQ26_07970 PF00465 Iron-containing alcohol dehydrogenase DBQ26_07985 PF01638 HxlR-like helix-turn-helix DBQ26_07995 PF01451 Low molecular weight phosphotyrosine protein phosphatase DBQ26_08000 PF01565 FAD binding domain DBQ26_08000 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DBQ26_08025 PF01645 Conserved region in glutamate synthase DBQ26_08040 PF00577 Outer membrane usher protein DBQ26_08040 PF13953 PapC C-terminal domain DBQ26_08040 PF13954 PapC N-terminal domain DBQ26_08050 PF12832 MFS_1 like family DBQ26_08060 PF02785 Biotin carboxylase C-terminal domain DBQ26_08060 PF00289 Biotin carboxylase, N-terminal domain DBQ26_08060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DBQ26_08065 PF00364 Biotin-requiring enzyme DBQ26_08070 PF01220 Dehydroquinase class II DBQ26_08075 PF11799 impB/mucB/samB family C-terminal domain DBQ26_08075 PF00817 impB/mucB/samB family DBQ26_08075 PF13438 Domain of unknown function (DUF4113) DBQ26_08080 PF00593 TonB dependent receptor DBQ26_08080 PF07715 TonB-dependent Receptor Plug Domain DBQ26_08085 PF03328 HpcH/HpaI aldolase/citrate lyase family DBQ26_08090 PF04183 IucA / IucC family DBQ26_08090 PF06276 Ferric iron reductase FhuF-like transporter DBQ26_08095 PF07690 Major Facilitator Superfamily DBQ26_08100 PF04183 IucA / IucC family DBQ26_08100 PF06276 Ferric iron reductase FhuF-like transporter DBQ26_08105 PF02423 Ornithine cyclodeaminase/mu-crystallin family DBQ26_08110 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_08120 PF00005 ABC transporter DBQ26_08135 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_08135 PF13806 Rieske-like [2Fe-2S] domain DBQ26_08135 PF18267 Rubredoxin NAD+ reductase C-terminal domain DBQ26_08135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DBQ26_08135 PF04324 BFD-like [2Fe-2S] binding domain DBQ26_08135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DBQ26_08140 PF04324 BFD-like [2Fe-2S] binding domain DBQ26_08140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DBQ26_08140 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_08140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DBQ26_08140 PF18267 Rubredoxin NAD+ reductase C-terminal domain DBQ26_08145 PF04324 BFD-like [2Fe-2S] binding domain DBQ26_08145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DBQ26_08145 PF00384 Molybdopterin oxidoreductase DBQ26_08145 PF01568 Molydopterin dinucleotide binding domain DBQ26_08150 PF12804 MobA-like NTP transferase domain DBQ26_08155 PF00384 Molybdopterin oxidoreductase DBQ26_08155 PF01568 Molydopterin dinucleotide binding domain DBQ26_08155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DBQ26_08160 PF06463 Molybdenum Cofactor Synthesis C DBQ26_08160 PF04055 Radical SAM superfamily DBQ26_08170 PF02391 MoaE protein DBQ26_08175 PF00994 Probable molybdopterin binding domain DBQ26_08175 PF01967 MoaC family DBQ26_08180 PF03453 MoeA N-terminal region (domain I and II) DBQ26_08180 PF00994 Probable molybdopterin binding domain DBQ26_08180 PF03454 MoeA C-terminal region (domain IV) DBQ26_08185 PF01638 HxlR-like helix-turn-helix DBQ26_08190 PF00392 Bacterial regulatory proteins, gntR family DBQ26_08190 PF00155 Aminotransferase class I and II DBQ26_08195 PF00892 EamA-like transporter family DBQ26_08215 PF02635 DsrE/DsrF-like family DBQ26_08220 PF16363 GDP-mannose 4,6 dehydratase DBQ26_08225 PF10415 Fumarase C C-terminus DBQ26_08225 PF00206 Lyase DBQ26_08240 PF00561 alpha/beta hydrolase fold DBQ26_08260 PF01266 FAD dependent oxidoreductase DBQ26_08270 PF02542 YgbB family DBQ26_08280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DBQ26_08280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DBQ26_08285 PF00440 Bacterial regulatory proteins, tetR family DBQ26_08290 PF00158 Sigma-54 interaction domain DBQ26_08290 PF02954 Bacterial regulatory protein, Fis family DBQ26_08290 PF00072 Response regulator receiver domain DBQ26_08295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_08295 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_08295 PF00989 PAS fold DBQ26_08305 PF18693 TRAM domain DBQ26_08305 PF04055 Radical SAM superfamily DBQ26_08305 PF00919 Uncharacterized protein family UPF0004 DBQ26_08310 PF00696 Amino acid kinase family DBQ26_08315 PF01765 Ribosome recycling factor DBQ26_08320 PF01255 Putative undecaprenyl diphosphate synthase DBQ26_08330 PF13288 DXP reductoisomerase C-terminal domain DBQ26_08330 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DBQ26_08330 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DBQ26_08335 PF17820 PDZ domain DBQ26_08335 PF13180 PDZ domain DBQ26_08335 PF02163 Peptidase family M50 DBQ26_08340 PF07244 Surface antigen variable number repeat DBQ26_08340 PF01103 Surface antigen DBQ26_08350 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_08350 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DBQ26_08355 PF07977 FabA-like domain DBQ26_08360 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_08360 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DBQ26_08375 PF02631 RecX family DBQ26_08380 PF00154 recA bacterial DNA recombination protein DBQ26_08385 PF01479 S4 domain DBQ26_08390 PF13419 Haloacid dehalogenase-like hydrolase DBQ26_08405 PF01037 Lrp/AsnC ligand binding domain DBQ26_08410 PF00266 Aminotransferase class-V DBQ26_08415 PF00324 Amino acid permease DBQ26_08430 PF05922 Peptidase inhibitor I9 DBQ26_08430 PF00082 Subtilase family DBQ26_08435 PF01740 STAS domain DBQ26_08435 PF00916 Sulfate permease family DBQ26_08445 PF07995 Glucose / Sorbosone dehydrogenase DBQ26_08455 PF03707 Bacterial signalling protein N terminal repeat DBQ26_08455 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_08455 PF00563 EAL domain DBQ26_08470 PF02378 Phosphotransferase system, EIIC DBQ26_08470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DBQ26_08475 PF00294 pfkB family carbohydrate kinase DBQ26_08480 PF00381 PTS HPr component phosphorylation site DBQ26_08480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DBQ26_08480 PF02896 PEP-utilising enzyme, TIM barrel domain DBQ26_08480 PF05524 PEP-utilising enzyme, N-terminal DBQ26_08480 PF00391 PEP-utilising enzyme, mobile domain DBQ26_08500 PF03928 Haem-degrading DBQ26_08505 PF05525 Branched-chain amino acid transport protein DBQ26_08510 PF00557 Metallopeptidase family M24 DBQ26_08515 PF03466 LysR substrate binding domain DBQ26_08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_08525 PF00462 Glutaredoxin DBQ26_08530 PF00202 Aminotransferase class-III DBQ26_08535 PF01380 SIS domain DBQ26_08535 PF00571 CBS domain DBQ26_08560 PF02881 SRP54-type protein, helical bundle domain DBQ26_08560 PF00448 SRP54-type protein, GTPase domain DBQ26_08580 PF08173 Membrane bound YbgT-like protein DBQ26_08585 PF02322 Cytochrome bd terminal oxidase subunit II DBQ26_08590 PF01654 Cytochrome bd terminal oxidase subunit I DBQ26_08600 PF07290 Protein of unknown function (DUF1449) DBQ26_08610 PF00294 pfkB family carbohydrate kinase DBQ26_08615 PF08367 Peptidase M16C associated DBQ26_08615 PF00675 Insulinase (Peptidase family M16) DBQ26_08615 PF05193 Peptidase M16 inactive domain DBQ26_08620 PF02253 Phospholipase A1 DBQ26_08625 PF02386 Cation transport protein DBQ26_08630 PF02080 TrkA-C domain DBQ26_08630 PF02254 TrkA-N domain DBQ26_08635 PF00585 C-terminal regulatory domain of Threonine dehydratase DBQ26_08635 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_08640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DBQ26_08655 PF02774 Semialdehyde dehydrogenase, dimerisation domain DBQ26_08655 PF01118 Semialdehyde dehydrogenase, NAD binding domain DBQ26_08665 PF02617 ATP-dependent Clp protease adaptor protein ClpS DBQ26_08670 PF10431 C-terminal, D2-small domain, of ClpB protein DBQ26_08670 PF02861 Clp amino terminal domain, pathogenicity island component DBQ26_08670 PF17871 AAA lid domain DBQ26_08670 PF07724 AAA domain (Cdc48 subfamily) DBQ26_08670 PF00004 ATPase family associated with various cellular activities (AAA) DBQ26_08675 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DBQ26_08680 PF00793 DAHP synthetase I family DBQ26_08695 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_08695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DBQ26_08725 PF00117 Glutamine amidotransferase class-I DBQ26_08725 PF06418 CTP synthase N-terminus DBQ26_08730 PF00793 DAHP synthetase I family DBQ26_08735 PF03952 Enolase, N-terminal domain DBQ26_08735 PF00113 Enolase, C-terminal TIM barrel domain DBQ26_08740 PF04239 Protein of unknown function (DUF421) DBQ26_08750 PF00593 TonB dependent receptor DBQ26_08750 PF07715 TonB-dependent Receptor Plug Domain DBQ26_08755 PF04977 Septum formation initiator DBQ26_08760 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DBQ26_08765 PF01144 Coenzyme A transferase DBQ26_08770 PF01144 Coenzyme A transferase DBQ26_08775 PF02803 Thiolase, C-terminal domain DBQ26_08775 PF00108 Thiolase, N-terminal domain DBQ26_08780 PF00206 Lyase DBQ26_08780 PF10397 Adenylosuccinate lyase C-terminus DBQ26_08785 PF00561 alpha/beta hydrolase fold DBQ26_08790 PF07690 Major Facilitator Superfamily DBQ26_08795 PF02627 Carboxymuconolactone decarboxylase family DBQ26_08800 PF00775 Dioxygenase DBQ26_08800 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DBQ26_08805 PF00775 Dioxygenase DBQ26_08810 PF01487 Type I 3-dehydroquinase DBQ26_08815 PF05048 Periplasmic copper-binding protein (NosD) DBQ26_08820 PF04966 Carbohydrate-selective porin, OprB family DBQ26_08825 PF13360 PQQ-like domain DBQ26_08825 PF01011 PQQ enzyme repeat DBQ26_08835 PF04143 Sulphur transport DBQ26_08845 PF00753 Metallo-beta-lactamase superfamily DBQ26_08850 PF01614 Bacterial transcriptional regulator DBQ26_08850 PF09339 IclR helix-turn-helix domain DBQ26_08855 PF03466 LysR substrate binding domain DBQ26_08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_08860 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_08860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_08860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_08875 PF00106 short chain dehydrogenase DBQ26_08885 PF07690 Major Facilitator Superfamily DBQ26_08895 PF01425 Amidase DBQ26_08900 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_08915 PF00355 Rieske [2Fe-2S] domain DBQ26_08915 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DBQ26_08930 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_08930 PF00175 Oxidoreductase NAD-binding domain DBQ26_08935 PF01613 Flavin reductase like domain DBQ26_08940 PF12833 Helix-turn-helix domain DBQ26_08940 PF02311 AraC-like ligand binding domain DBQ26_08945 PF07833 Copper amine oxidase N-terminal domain DBQ26_08945 PF01179 Copper amine oxidase, enzyme domain DBQ26_08945 PF02728 Copper amine oxidase, N3 domain DBQ26_08945 PF02727 Copper amine oxidase, N2 domain DBQ26_08955 PF00171 Aldehyde dehydrogenase family DBQ26_08960 PF12146 Serine aminopeptidase, S33 DBQ26_08965 PF00108 Thiolase, N-terminal domain DBQ26_08965 PF02803 Thiolase, C-terminal domain DBQ26_08970 PF01144 Coenzyme A transferase DBQ26_08975 PF01144 Coenzyme A transferase DBQ26_08980 PF00775 Dioxygenase DBQ26_08980 PF04444 Catechol dioxygenase N terminus DBQ26_08985 PF02426 Muconolactone delta-isomerase DBQ26_08990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DBQ26_08990 PF13378 Enolase C-terminal domain-like DBQ26_08995 PF03466 LysR substrate binding domain DBQ26_08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09005 PF00392 Bacterial regulatory proteins, gntR family DBQ26_09005 PF07729 FCD domain DBQ26_09010 PF00920 Dehydratase family DBQ26_09015 PF07690 Major Facilitator Superfamily DBQ26_09025 PF00171 Aldehyde dehydrogenase family DBQ26_09030 PF01494 FAD binding domain DBQ26_09035 PF00171 Aldehyde dehydrogenase family DBQ26_09040 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_09040 PF00107 Zinc-binding dehydrogenase DBQ26_09050 PF00561 alpha/beta hydrolase fold DBQ26_09055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DBQ26_09055 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_09060 PF00106 short chain dehydrogenase DBQ26_09065 PF00376 MerR family regulatory protein DBQ26_09065 PF09278 MerR, DNA binding DBQ26_09075 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_09100 PF12706 Beta-lactamase superfamily domain DBQ26_09110 PF01575 MaoC like domain DBQ26_09115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_09115 PF12806 Acetyl-CoA dehydrogenase C-terminal like DBQ26_09115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_09115 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_09125 PF00501 AMP-binding enzyme DBQ26_09125 PF13193 AMP-binding enzyme C-terminal domain DBQ26_09145 PF13737 Transposase DDE domain DBQ26_09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09155 PF03466 LysR substrate binding domain DBQ26_09160 PF02525 Flavodoxin-like fold DBQ26_09165 PF07681 DoxX DBQ26_09170 PF00043 Glutathione S-transferase, C-terminal domain DBQ26_09170 PF02798 Glutathione S-transferase, N-terminal domain DBQ26_09175 PF13737 Transposase DDE domain DBQ26_09210 PF13737 Transposase DDE domain DBQ26_09230 PF03466 LysR substrate binding domain DBQ26_09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09250 PF07690 Major Facilitator Superfamily DBQ26_09255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DBQ26_09255 PF01842 ACT domain DBQ26_09255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DBQ26_09260 PF03737 Aldolase/RraA DBQ26_09275 PF03466 LysR substrate binding domain DBQ26_09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09280 PF00202 Aminotransferase class-III DBQ26_09285 PF00171 Aldehyde dehydrogenase family DBQ26_09290 PF00324 Amino acid permease DBQ26_09295 PF03466 LysR substrate binding domain DBQ26_09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09300 PF07883 Cupin domain DBQ26_09305 PF01494 FAD binding domain DBQ26_09310 PF13417 Glutathione S-transferase, N-terminal domain DBQ26_09315 PF01557 Fumarylacetoacetate (FAA) hydrolase family DBQ26_09330 PF13533 Biotin-lipoyl like DBQ26_09345 PF00171 Aldehyde dehydrogenase family DBQ26_09350 PF00920 Dehydratase family DBQ26_09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09360 PF03466 LysR substrate binding domain DBQ26_09365 PF01370 NAD dependent epimerase/dehydratase family DBQ26_09370 PF07690 Major Facilitator Superfamily DBQ26_09375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DBQ26_09375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DBQ26_09395 PF00005 ABC transporter DBQ26_09415 PF14572 Phosphoribosyl synthetase-associated domain DBQ26_09415 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DBQ26_09420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DBQ26_09435 PF00196 Bacterial regulatory proteins, luxR family DBQ26_09435 PF03472 Autoinducer binding domain DBQ26_09440 PF01425 Amidase DBQ26_09445 PF13533 Biotin-lipoyl like DBQ26_09450 PF07690 Major Facilitator Superfamily DBQ26_09475 PF01975 Survival protein SurE DBQ26_09485 PF13291 ACT domain DBQ26_09485 PF04607 Region found in RelA / SpoT proteins DBQ26_09485 PF02824 TGS domain DBQ26_09515 PF00665 Integrase core domain DBQ26_09515 PF13936 Helix-turn-helix domain DBQ26_09530 PF12146 Serine aminopeptidase, S33 DBQ26_09535 PF03466 LysR substrate binding domain DBQ26_09535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09550 PF12146 Serine aminopeptidase, S33 DBQ26_09555 PF12833 Helix-turn-helix domain DBQ26_09555 PF02311 AraC-like ligand binding domain DBQ26_09570 PF16970 Type-1 fimbrial protein, A DBQ26_09575 PF02753 Pili assembly chaperone PapD, C-terminal domain DBQ26_09575 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DBQ26_09580 PF13953 PapC C-terminal domain DBQ26_09580 PF13954 PapC N-terminal domain DBQ26_09580 PF00577 Outer membrane usher protein DBQ26_09585 PF00419 Fimbrial protein DBQ26_09595 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_09595 PF00107 Zinc-binding dehydrogenase DBQ26_09605 PF00199 Catalase DBQ26_09625 PF13091 PLD-like domain DBQ26_09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_09635 PF00672 HAMP domain DBQ26_09635 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_09640 PF00072 Response regulator receiver domain DBQ26_09640 PF00486 Transcriptional regulatory protein, C terminal DBQ26_09645 PF00529 HlyD membrane-fusion protein of T1SS DBQ26_09645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DBQ26_09650 PF00873 AcrB/AcrD/AcrF family DBQ26_09665 PF01244 Membrane dipeptidase (Peptidase family M19) DBQ26_09670 PF04055 Radical SAM superfamily DBQ26_09670 PF13186 Iron-sulfur cluster-binding domain DBQ26_09675 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DBQ26_09680 PF03070 TENA/THI-4/PQQC family DBQ26_09685 PF12706 Beta-lactamase superfamily domain DBQ26_09690 PF08042 PqqA family DBQ26_09695 PF00149 Calcineurin-like phosphoesterase DBQ26_09705 PF00857 Isochorismatase family DBQ26_09705 PF00550 Phosphopantetheine attachment site DBQ26_09710 PF00106 short chain dehydrogenase DBQ26_09715 PF03459 TOBE domain DBQ26_09715 PF00005 ABC transporter DBQ26_09720 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09730 PF03459 TOBE domain DBQ26_09735 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DBQ26_09735 PF00355 Rieske [2Fe-2S] domain DBQ26_09740 PF00866 Ring hydroxylating beta subunit DBQ26_09745 PF00175 Oxidoreductase NAD-binding domain DBQ26_09745 PF00970 Oxidoreductase FAD-binding domain DBQ26_09745 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_09750 PF14525 AraC-binding-like domain DBQ26_09750 PF12833 Helix-turn-helix domain DBQ26_09760 PF01613 Flavin reductase like domain DBQ26_09775 PF01738 Dienelactone hydrolase family DBQ26_09785 PF07690 Major Facilitator Superfamily DBQ26_09790 PF12833 Helix-turn-helix domain DBQ26_09790 PF06719 AraC-type transcriptional regulator N-terminus DBQ26_09835 PF13737 Transposase DDE domain DBQ26_09845 PF13737 Transposase DDE domain DBQ26_09855 PF03466 LysR substrate binding domain DBQ26_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09860 PF01144 Coenzyme A transferase DBQ26_09865 PF01144 Coenzyme A transferase DBQ26_09870 PF02667 Short chain fatty acid transporter DBQ26_09875 PF00108 Thiolase, N-terminal domain DBQ26_09875 PF02803 Thiolase, C-terminal domain DBQ26_09880 PF03466 LysR substrate binding domain DBQ26_09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_09885 PF03466 LysR substrate binding domain DBQ26_09900 PF10415 Fumarase C C-terminus DBQ26_09900 PF00206 Lyase DBQ26_09905 PF07715 TonB-dependent Receptor Plug Domain DBQ26_09905 PF00593 TonB dependent receptor DBQ26_09910 PF00083 Sugar (and other) transporter DBQ26_09920 PF02525 Flavodoxin-like fold DBQ26_09925 PF01638 HxlR-like helix-turn-helix DBQ26_09930 PF12833 Helix-turn-helix domain DBQ26_09930 PF06445 GyrI-like small molecule binding domain DBQ26_09945 PF01925 Sulfite exporter TauE/SafE DBQ26_09950 PF00753 Metallo-beta-lactamase superfamily DBQ26_09950 PF04273 Putative phosphatase (DUF442) DBQ26_09955 PF00753 Metallo-beta-lactamase superfamily DBQ26_09960 PF02954 Bacterial regulatory protein, Fis family DBQ26_09960 PF00158 Sigma-54 interaction domain DBQ26_09960 PF00072 Response regulator receiver domain DBQ26_09965 PF01062 Bestrophin, RFP-TM, chloride channel DBQ26_09970 PF00107 Zinc-binding dehydrogenase DBQ26_09970 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_09975 PF00106 short chain dehydrogenase DBQ26_09980 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_09980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DBQ26_09985 PF00364 Biotin-requiring enzyme DBQ26_09985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DBQ26_09985 PF02817 e3 binding domain DBQ26_09990 PF02780 Transketolase, C-terminal domain DBQ26_09990 PF02779 Transketolase, pyrimidine binding domain DBQ26_09995 PF00676 Dehydrogenase E1 component DBQ26_10000 PF04055 Radical SAM superfamily DBQ26_10015 PF08448 PAS fold DBQ26_10015 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_10025 PF01264 Chorismate synthase DBQ26_10030 PF05175 Methyltransferase small domain DBQ26_10035 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_10045 PF01434 Peptidase family M41 DBQ26_10045 PF17862 AAA+ lid domain DBQ26_10045 PF00004 ATPase family associated with various cellular activities (AAA) DBQ26_10055 PF05166 YcgL domain DBQ26_10075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_10075 PF03466 LysR substrate binding domain DBQ26_10080 PF02525 Flavodoxin-like fold DBQ26_10085 PF01612 3'-5' exonuclease DBQ26_10085 PF00570 HRDC domain DBQ26_10090 PF02132 RecR protein DBQ26_10090 PF13662 Toprim domain DBQ26_10095 PF02575 YbaB/EbfC DNA-binding family DBQ26_10105 PF01053 Cys/Met metabolism PLP-dependent enzyme DBQ26_10110 PF00561 alpha/beta hydrolase fold DBQ26_10125 PF01230 HIT domain DBQ26_10150 PF02684 Lipid-A-disaccharide synthetase DBQ26_10155 PF07715 TonB-dependent Receptor Plug Domain DBQ26_10155 PF00593 TonB dependent receptor DBQ26_10180 PF01925 Sulfite exporter TauE/SafE DBQ26_10185 PF00793 DAHP synthetase I family DBQ26_10190 PF02654 Cobalamin-5-phosphate synthase DBQ26_10205 PF02277 Phosphoribosyltransferase DBQ26_10210 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DBQ26_10230 PF07715 TonB-dependent Receptor Plug Domain DBQ26_10230 PF00593 TonB dependent receptor DBQ26_10235 PF04073 Aminoacyl-tRNA editing domain DBQ26_10245 PF03109 ABC1 family DBQ26_10250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_10250 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_10250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_10255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_10255 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_10255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_10260 PF00487 Fatty acid desaturase DBQ26_10265 PF12852 Cupin DBQ26_10265 PF12833 Helix-turn-helix domain DBQ26_10270 PF09312 SurA N-terminal domain DBQ26_10270 PF00639 PPIC-type PPIASE domain DBQ26_10275 PF00216 Bacterial DNA-binding protein DBQ26_10290 PF02082 Transcriptional regulator DBQ26_10295 PF00266 Aminotransferase class-V DBQ26_10300 PF01592 NifU-like N terminal domain DBQ26_10305 PF01521 Iron-sulphur cluster biosynthesis DBQ26_10310 PF07743 HSCB C-terminal oligomerisation domain DBQ26_10310 PF00226 DnaJ domain DBQ26_10315 PF00012 Hsp70 protein DBQ26_10320 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_10325 PF00211 Adenylate and Guanylate cyclase catalytic domain DBQ26_10335 PF00270 DEAD/DEAH box helicase DBQ26_10335 PF17757 UvrB interaction domain DBQ26_10335 PF00271 Helicase conserved C-terminal domain DBQ26_10335 PF02559 CarD-like/TRCF domain DBQ26_10335 PF03461 TRCF domain DBQ26_10355 PF03737 Aldolase/RraA DBQ26_10360 PF13460 NAD(P)H-binding DBQ26_10365 PF01649 Ribosomal protein S20 DBQ26_10375 PF00459 Inositol monophosphatase family DBQ26_10395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DBQ26_10395 PF00005 ABC transporter DBQ26_10400 PF12911 N-terminal TM domain of oligopeptide transport permease C DBQ26_10400 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_10405 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_10410 PF01432 Peptidase family M3 DBQ26_10415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DBQ26_10430 PF07715 TonB-dependent Receptor Plug Domain DBQ26_10430 PF00593 TonB dependent receptor DBQ26_10440 PF01618 MotA/TolQ/ExbB proton channel family DBQ26_10445 PF02472 Biopolymer transport protein ExbD/TolR DBQ26_10450 PF02472 Biopolymer transport protein ExbD/TolR DBQ26_10455 PF01274 Malate synthase DBQ26_10460 PF03969 AFG1-like ATPase DBQ26_10470 PF00743 Flavin-binding monooxygenase-like DBQ26_10475 PF03956 Lysine exporter LysO DBQ26_10480 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DBQ26_10490 PF00216 Bacterial DNA-binding protein DBQ26_10495 PF00575 S1 RNA binding domain DBQ26_10500 PF02224 Cytidylate kinase DBQ26_10510 PF14437 MafB19-like deaminase DBQ26_10520 PF03167 Uracil DNA glycosylase superfamily DBQ26_10530 PF03934 Type II secretion system (T2SS), protein K DBQ26_10535 PF07963 Prokaryotic N-terminal methylation motif DBQ26_10535 PF11612 Type II secretion system (T2SS), protein J DBQ26_10540 PF02501 Type II secretion system (T2SS), protein I DBQ26_10540 PF07963 Prokaryotic N-terminal methylation motif DBQ26_10555 PF01026 TatD related DNase DBQ26_10565 PF09115 DNA polymerase III, delta subunit, C terminal DBQ26_10570 PF02348 Cytidylyltransferase DBQ26_10575 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DBQ26_10580 PF00005 ABC transporter DBQ26_10580 PF00664 ABC transporter transmembrane region DBQ26_10590 PF01618 MotA/TolQ/ExbB proton channel family DBQ26_10595 PF17762 HTH domain found in ParB protein DBQ26_10595 PF02195 ParB-like nuclease domain DBQ26_10600 PF13614 AAA domain DBQ26_10605 PF02527 rRNA small subunit methyltransferase G DBQ26_10610 PF00483 Nucleotidyl transferase DBQ26_10615 PF01636 Phosphotransferase enzyme family DBQ26_10620 PF04453 LPS transport system D DBQ26_10620 PF03968 OstA-like protein DBQ26_10625 PF09312 SurA N-terminal domain DBQ26_10625 PF00639 PPIC-type PPIASE domain DBQ26_10630 PF01116 Fructose-bisphosphate aldolase class-II DBQ26_10640 PF00162 Phosphoglycerate kinase DBQ26_10650 PF02545 Maf-like protein DBQ26_10655 PF08007 Cupin superfamily protein DBQ26_10670 PF00375 Sodium:dicarboxylate symporter family DBQ26_10675 PF06912 Protein of unknown function (DUF1275) DBQ26_10680 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DBQ26_10685 PF00664 ABC transporter transmembrane region DBQ26_10685 PF00005 ABC transporter DBQ26_10695 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DBQ26_10695 PF12833 Helix-turn-helix domain DBQ26_10700 PF01597 Glycine cleavage H-protein DBQ26_10705 PF02146 Sir2 family DBQ26_10710 PF00474 Sodium:solute symporter family DBQ26_10715 PF01037 Lrp/AsnC ligand binding domain DBQ26_10720 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DBQ26_10720 PF14850 DNA-binding domain of Proline dehydrogenase DBQ26_10720 PF00171 Aldehyde dehydrogenase family DBQ26_10720 PF01619 Proline dehydrogenase DBQ26_10730 PF05958 tRNA (Uracil-5-)-methyltransferase DBQ26_10740 PF09992 Phosphodiester glycosidase DBQ26_10770 PF02779 Transketolase, pyrimidine binding domain DBQ26_10770 PF02780 Transketolase, C-terminal domain DBQ26_10770 PF00456 Transketolase, thiamine diphosphate binding domain DBQ26_10775 PF02773 S-adenosylmethionine synthetase, C-terminal domain DBQ26_10775 PF02772 S-adenosylmethionine synthetase, central domain DBQ26_10775 PF00438 S-adenosylmethionine synthetase, N-terminal domain DBQ26_10795 PF00905 Penicillin binding protein transpeptidase domain DBQ26_10810 PF02075 Crossover junction endodeoxyribonuclease RuvC DBQ26_10815 PF01256 Carbohydrate kinase DBQ26_10815 PF03853 YjeF-related protein N-terminus DBQ26_10820 PF08331 Domain of unknown function (DUF1730) DBQ26_10825 PF04055 Radical SAM superfamily DBQ26_10825 PF06968 Biotin and Thiamin Synthesis associated domain DBQ26_10840 PF16970 Type-1 fimbrial protein, A DBQ26_10845 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DBQ26_10845 PF02753 Pili assembly chaperone PapD, C-terminal domain DBQ26_10850 PF13953 PapC C-terminal domain DBQ26_10850 PF13954 PapC N-terminal domain DBQ26_10850 PF00577 Outer membrane usher protein DBQ26_10855 PF00419 Fimbrial protein DBQ26_10860 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DBQ26_10860 PF12833 Helix-turn-helix domain DBQ26_10870 PF03466 LysR substrate binding domain DBQ26_10870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_10875 PF00892 EamA-like transporter family DBQ26_10885 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DBQ26_10895 PF03466 LysR substrate binding domain DBQ26_10895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_10910 PF00440 Bacterial regulatory proteins, tetR family DBQ26_10920 PF01709 Transcriptional regulator DBQ26_10985 PF01551 Peptidase family M23 DBQ26_10985 PF10145 Phage-related minor tail protein DBQ26_10985 PF01464 Transglycosylase SLT domain DBQ26_11010 PF09669 Phage regulatory protein Rha (Phage_pRha) DBQ26_11010 PF10549 ORF11CD3 domain DBQ26_11160 PF00145 C-5 cytosine-specific DNA methylase DBQ26_11165 PF00772 DnaB-like helicase N terminal domain DBQ26_11165 PF03796 DnaB-like helicase C terminal domain DBQ26_11255 PF01037 Lrp/AsnC ligand binding domain DBQ26_11265 PF00005 ABC transporter DBQ26_11270 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_11275 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_11290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_11290 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_11300 PF00296 Luciferase-like monooxygenase DBQ26_11305 PF03180 NLPA lipoprotein DBQ26_11310 PF03180 NLPA lipoprotein DBQ26_11315 PF09383 NIL domain DBQ26_11315 PF00005 ABC transporter DBQ26_11320 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_11325 PF01926 50S ribosome-binding GTPase DBQ26_11325 PF06071 Protein of unknown function (DUF933) DBQ26_11350 PF03591 AzlC protein DBQ26_11355 PF05437 Branched-chain amino acid transport protein (AzlD) DBQ26_11365 PF02222 ATP-grasp domain DBQ26_11370 PF01909 Nucleotidyltransferase domain DBQ26_11370 PF08335 GlnD PII-uridylyltransferase DBQ26_11370 PF01966 HD domain DBQ26_11375 PF00155 Aminotransferase class I and II DBQ26_11385 PF12833 Helix-turn-helix domain DBQ26_11385 PF02311 AraC-like ligand binding domain DBQ26_11390 PF00255 Glutathione peroxidase DBQ26_11395 PF01641 SelR domain DBQ26_11400 PF00155 Aminotransferase class I and II DBQ26_11405 PF00375 Sodium:dicarboxylate symporter family DBQ26_11410 PF00710 Asparaginase, N-terminal DBQ26_11410 PF17763 Glutaminase/Asparaginase C-terminal domain DBQ26_11415 PF01336 OB-fold nucleic acid binding domain DBQ26_11415 PF02811 PHP domain DBQ26_11415 PF07733 Bacterial DNA polymerase III alpha NTPase domain DBQ26_11415 PF14579 Helix-hairpin-helix motif DBQ26_11415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DBQ26_11420 PF00588 SpoU rRNA Methylase family DBQ26_11425 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_11440 PF13192 Thioredoxin domain DBQ26_11440 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_11455 PF03466 LysR substrate binding domain DBQ26_11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_11460 PF03358 NADPH-dependent FMN reductase DBQ26_11465 PF01758 Sodium Bile acid symporter family DBQ26_11475 PF01022 Bacterial regulatory protein, arsR family DBQ26_11480 PF03960 ArsC family DBQ26_11490 PF13382 Adenine deaminase C-terminal domain DBQ26_11490 PF01979 Amidohydrolase family DBQ26_11500 PF03466 LysR substrate binding domain DBQ26_11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_11510 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DBQ26_11515 PF01177 Asp/Glu/Hydantoin racemase DBQ26_11520 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DBQ26_11525 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_11530 PF00005 ABC transporter DBQ26_11535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DBQ26_11545 PF00083 Sugar (and other) transporter DBQ26_11550 PF00296 Luciferase-like monooxygenase DBQ26_11555 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_11555 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_11555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_11570 PF01654 Cytochrome bd terminal oxidase subunit I DBQ26_11575 PF02322 Cytochrome bd terminal oxidase subunit II DBQ26_11585 PF00392 Bacterial regulatory proteins, gntR family DBQ26_11585 PF00155 Aminotransferase class I and II DBQ26_11590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_11590 PF03466 LysR substrate binding domain DBQ26_11605 PF00698 Acyl transferase domain DBQ26_11610 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DBQ26_11620 PF01039 Carboxyl transferase domain DBQ26_11625 PF06857 Malonate decarboxylase delta subunit (MdcD) DBQ26_11630 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DBQ26_11635 PF16957 Malonate decarboxylase, alpha subunit, transporter DBQ26_11650 PF00392 Bacterial regulatory proteins, gntR family DBQ26_11650 PF00155 Aminotransferase class I and II DBQ26_11655 PF04172 LrgB-like family DBQ26_11660 PF03788 LrgA family DBQ26_11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_11665 PF03466 LysR substrate binding domain DBQ26_11670 PF14834 Glutathione S-transferase, C-terminal domain DBQ26_11670 PF02798 Glutathione S-transferase, N-terminal domain DBQ26_11675 PF02798 Glutathione S-transferase, N-terminal domain DBQ26_11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_11695 PF03466 LysR substrate binding domain DBQ26_11705 PF00665 Integrase core domain DBQ26_11705 PF13936 Helix-turn-helix domain DBQ26_11710 PF00581 Rhodanese-like domain DBQ26_11715 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_11725 PF00266 Aminotransferase class-V DBQ26_11730 PF01810 LysE type translocator DBQ26_11735 PF03466 LysR substrate binding domain DBQ26_11735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_11745 PF00497 Bacterial extracellular solute-binding proteins, family 3 DBQ26_11750 PF00497 Bacterial extracellular solute-binding proteins, family 3 DBQ26_11755 PF00005 ABC transporter DBQ26_11760 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_11765 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_11780 PF07690 Major Facilitator Superfamily DBQ26_11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_11785 PF03466 LysR substrate binding domain DBQ26_11795 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DBQ26_11800 PF00072 Response regulator receiver domain DBQ26_11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_11805 PF00072 Response regulator receiver domain DBQ26_11805 PF09308 LuxQ, periplasmic DBQ26_11805 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_11815 PF01037 Lrp/AsnC ligand binding domain DBQ26_11815 PF13404 AsnC-type helix-turn-helix domain DBQ26_11825 PF00717 Peptidase S24-like DBQ26_11850 PF00199 Catalase DBQ26_11850 PF18011 C-terminal domain found in long catalases DBQ26_11850 PF06628 Catalase-related immune-responsive DBQ26_11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_11890 PF03466 LysR substrate binding domain DBQ26_11905 PF07690 Major Facilitator Superfamily DBQ26_11920 PF13193 AMP-binding enzyme C-terminal domain DBQ26_11920 PF00501 AMP-binding enzyme DBQ26_11925 PF00440 Bacterial regulatory proteins, tetR family DBQ26_11930 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_11930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_11930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_11935 PF01039 Carboxyl transferase domain DBQ26_11940 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_11945 PF00364 Biotin-requiring enzyme DBQ26_11945 PF02785 Biotin carboxylase C-terminal domain DBQ26_11945 PF00289 Biotin carboxylase, N-terminal domain DBQ26_11945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DBQ26_11950 PF00682 HMGL-like DBQ26_11955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_11955 PF03466 LysR substrate binding domain DBQ26_11970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_11970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_11970 PF12806 Acetyl-CoA dehydrogenase C-terminal like DBQ26_11970 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_11980 PF07690 Major Facilitator Superfamily DBQ26_11990 PF01144 Coenzyme A transferase DBQ26_11995 PF01144 Coenzyme A transferase DBQ26_12000 PF07690 Major Facilitator Superfamily DBQ26_12005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_12005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_12005 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_12010 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_12020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DBQ26_12020 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DBQ26_12020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DBQ26_12025 PF00108 Thiolase, N-terminal domain DBQ26_12025 PF02803 Thiolase, C-terminal domain DBQ26_12030 PF09339 IclR helix-turn-helix domain DBQ26_12035 PF07690 Major Facilitator Superfamily DBQ26_12040 PF03060 Nitronate monooxygenase DBQ26_12045 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_12050 PF09339 IclR helix-turn-helix domain DBQ26_12055 PF02515 CoA-transferase family III DBQ26_12060 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_12060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_12060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_12065 PF07690 Major Facilitator Superfamily DBQ26_12070 PF13419 Haloacid dehalogenase-like hydrolase DBQ26_12075 PF00266 Aminotransferase class-V DBQ26_12080 PF01266 FAD dependent oxidoreductase DBQ26_12085 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_12090 PF08402 TOBE domain DBQ26_12090 PF00005 ABC transporter DBQ26_12100 PF07702 UTRA domain DBQ26_12100 PF00392 Bacterial regulatory proteins, gntR family DBQ26_12105 PF00842 Alanine racemase, C-terminal domain DBQ26_12105 PF01168 Alanine racemase, N-terminal domain DBQ26_12110 PF01494 FAD binding domain DBQ26_12115 PF01614 Bacterial transcriptional regulator DBQ26_12115 PF09339 IclR helix-turn-helix domain DBQ26_12120 PF02525 Flavodoxin-like fold DBQ26_12125 PF03466 LysR substrate binding domain DBQ26_12125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_12160 PF00665 Integrase core domain DBQ26_12160 PF13936 Helix-turn-helix domain DBQ26_12170 PF03061 Thioesterase superfamily DBQ26_12175 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_12180 PF07848 PaaX-like protein DBQ26_12180 PF08223 PaaX-like protein C-terminal domain DBQ26_12185 PF14535 AMP-binding enzyme C-terminal domain DBQ26_12185 PF00501 AMP-binding enzyme DBQ26_12190 PF00108 Thiolase, N-terminal domain DBQ26_12190 PF02803 Thiolase, C-terminal domain DBQ26_12195 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DBQ26_12195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DBQ26_12195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DBQ26_12200 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_12205 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_12210 PF00175 Oxidoreductase NAD-binding domain DBQ26_12210 PF00970 Oxidoreductase FAD-binding domain DBQ26_12210 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_12215 PF01883 Iron-sulfur cluster assembly protein DBQ26_12220 PF05138 Phenylacetic acid catabolic protein DBQ26_12225 PF06243 Phenylacetic acid degradation B DBQ26_12230 PF05138 Phenylacetic acid catabolic protein DBQ26_12235 PF00171 Aldehyde dehydrogenase family DBQ26_12235 PF01575 MaoC like domain DBQ26_12240 PF03313 Serine dehydratase alpha chain DBQ26_12240 PF03315 Serine dehydratase beta chain DBQ26_12260 PF00376 MerR family regulatory protein DBQ26_12260 PF09278 MerR, DNA binding DBQ26_12270 PF02677 Epoxyqueuosine reductase QueH DBQ26_12275 PF00392 Bacterial regulatory proteins, gntR family DBQ26_12275 PF00155 Aminotransferase class I and II DBQ26_12290 PF07690 Major Facilitator Superfamily DBQ26_12295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DBQ26_12300 PF12796 Ankyrin repeats (3 copies) DBQ26_12305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_12305 PF03466 LysR substrate binding domain DBQ26_12360 PF00005 ABC transporter DBQ26_12365 PF00497 Bacterial extracellular solute-binding proteins, family 3 DBQ26_12370 PF01425 Amidase DBQ26_12375 PF01402 Ribbon-helix-helix protein, copG family DBQ26_12375 PF08753 NikR C terminal nickel binding domain DBQ26_12390 PF01638 HxlR-like helix-turn-helix DBQ26_12395 PF02525 Flavodoxin-like fold DBQ26_12400 PF00289 Biotin carboxylase, N-terminal domain DBQ26_12400 PF02785 Biotin carboxylase C-terminal domain DBQ26_12400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DBQ26_12415 PF00107 Zinc-binding dehydrogenase DBQ26_12415 PF13823 Alcohol dehydrogenase GroES-associated DBQ26_12415 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_12420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DBQ26_12420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DBQ26_12425 PF00892 EamA-like transporter family DBQ26_12455 PF05860 haemagglutination activity domain DBQ26_12455 PF13018 Extended Signal Peptide of Type V secretion system DBQ26_12455 PF04829 Pre-toxin domain with VENN motif DBQ26_12455 PF13332 Hemagglutinin repeat DBQ26_12460 PF08479 POTRA domain, ShlB-type DBQ26_12460 PF17287 POTRA domain DBQ26_12460 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DBQ26_12465 PF00654 Voltage gated chloride channel DBQ26_12470 PF02785 Biotin carboxylase C-terminal domain DBQ26_12470 PF00289 Biotin carboxylase, N-terminal domain DBQ26_12470 PF00364 Biotin-requiring enzyme DBQ26_12470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DBQ26_12480 PF07286 Protein of unknown function (DUF1445) DBQ26_12485 PF03746 LamB/YcsF family DBQ26_12490 PF01566 Natural resistance-associated macrophage protein DBQ26_12495 PF03466 LysR substrate binding domain DBQ26_12495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_12505 PF08281 Sigma-70, region 4 DBQ26_12505 PF04542 Sigma-70 region 2 DBQ26_12515 PF05114 Protein of unknown function (DUF692) DBQ26_12570 PF05368 NmrA-like family DBQ26_12575 PF01638 HxlR-like helix-turn-helix DBQ26_12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_12595 PF03466 LysR substrate binding domain DBQ26_12610 PF00440 Bacterial regulatory proteins, tetR family DBQ26_12620 PF00561 alpha/beta hydrolase fold DBQ26_12625 PF07859 alpha/beta hydrolase fold DBQ26_12630 PF00563 EAL domain DBQ26_12630 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_12630 PF03707 Bacterial signalling protein N terminal repeat DBQ26_12650 PF13936 Helix-turn-helix domain DBQ26_12650 PF00665 Integrase core domain DBQ26_12665 PF07690 Major Facilitator Superfamily DBQ26_12670 PF01292 Prokaryotic cytochrome b561 DBQ26_12675 PF00199 Catalase DBQ26_12695 PF12833 Helix-turn-helix domain DBQ26_12695 PF06719 AraC-type transcriptional regulator N-terminus DBQ26_12705 PF00313 'Cold-shock' DNA-binding domain DBQ26_12725 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_12725 PF13359 DDE superfamily endonuclease DBQ26_12745 PF00892 EamA-like transporter family DBQ26_12750 PF01037 Lrp/AsnC ligand binding domain DBQ26_12755 PF13520 Amino acid permease DBQ26_12760 PF01636 Phosphotransferase enzyme family DBQ26_12770 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DBQ26_12770 PF12833 Helix-turn-helix domain DBQ26_12775 PF00202 Aminotransferase class-III DBQ26_12780 PF05188 MutS domain II DBQ26_12780 PF01624 MutS domain I DBQ26_12780 PF05190 MutS family domain IV DBQ26_12780 PF05192 MutS domain III DBQ26_12780 PF00488 MutS domain V DBQ26_12790 PF11953 Domain of unknown function (DUF3470) DBQ26_12790 PF00037 4Fe-4S binding domain DBQ26_12800 PF01596 O-methyltransferase DBQ26_12810 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_12815 PF01205 Uncharacterized protein family UPF0029 DBQ26_12820 PF13533 Biotin-lipoyl like DBQ26_12825 PF03412 Peptidase C39 family DBQ26_12825 PF00005 ABC transporter DBQ26_12825 PF00664 ABC transporter transmembrane region DBQ26_12830 PF02321 Outer membrane efflux protein DBQ26_12835 PF12399 Branched-chain amino acid ATP-binding cassette transporter DBQ26_12835 PF00005 ABC transporter DBQ26_12840 PF03968 OstA-like protein DBQ26_12855 PF00571 CBS domain DBQ26_12855 PF01380 SIS domain DBQ26_12860 PF09190 DALR domain DBQ26_12860 PF01406 tRNA synthetases class I (C) catalytic domain DBQ26_12895 PF13359 DDE superfamily endonuclease DBQ26_12895 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_12910 PF13737 Transposase DDE domain DBQ26_12925 PF01638 HxlR-like helix-turn-helix DBQ26_12930 PF07690 Major Facilitator Superfamily DBQ26_12940 PF00924 Mechanosensitive ion channel DBQ26_12985 PF00440 Bacterial regulatory proteins, tetR family DBQ26_12995 PF08241 Methyltransferase domain DBQ26_13005 PF13737 Transposase DDE domain DBQ26_13015 PF01037 Lrp/AsnC ligand binding domain DBQ26_13025 PF03807 NADP oxidoreductase coenzyme F420-dependent DBQ26_13025 PF14748 Pyrroline-5-carboxylate reductase dimerisation DBQ26_13030 PF13936 Helix-turn-helix domain DBQ26_13030 PF00665 Integrase core domain DBQ26_13035 PF13737 Transposase DDE domain DBQ26_13040 PF00313 'Cold-shock' DNA-binding domain DBQ26_13045 PF03279 Bacterial lipid A biosynthesis acyltransferase DBQ26_13050 PF01810 LysE type translocator DBQ26_13085 PF13742 OB-fold nucleic acid binding domain DBQ26_13085 PF02601 Exonuclease VII, large subunit DBQ26_13120 PF09278 MerR, DNA binding DBQ26_13120 PF00376 MerR family regulatory protein DBQ26_13125 PF00403 Heavy-metal-associated domain DBQ26_13135 PF02954 Bacterial regulatory protein, Fis family DBQ26_13135 PF00158 Sigma-54 interaction domain DBQ26_13135 PF02830 V4R domain DBQ26_13135 PF06505 Activator of aromatic catabolism DBQ26_13140 PF06099 Phenol hydroxylase subunit DBQ26_13145 PF02332 Methane/Phenol/Toluene Hydroxylase DBQ26_13150 PF02406 MmoB/DmpM family DBQ26_13155 PF02332 Methane/Phenol/Toluene Hydroxylase DBQ26_13155 PF04945 YHS domain DBQ26_13165 PF00970 Oxidoreductase FAD-binding domain DBQ26_13165 PF00175 Oxidoreductase NAD-binding domain DBQ26_13165 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_13175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_13175 PF03466 LysR substrate binding domain DBQ26_13185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DBQ26_13185 PF00355 Rieske [2Fe-2S] domain DBQ26_13190 PF00866 Ring hydroxylating beta subunit DBQ26_13195 PF00970 Oxidoreductase FAD-binding domain DBQ26_13195 PF00175 Oxidoreductase NAD-binding domain DBQ26_13195 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_13205 PF00872 Transposase, Mutator family DBQ26_13215 PF03594 Benzoate membrane transport protein DBQ26_13225 PF00665 Integrase core domain DBQ26_13225 PF13936 Helix-turn-helix domain DBQ26_13240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DBQ26_13240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DBQ26_13245 PF11898 Domain of unknown function (DUF3418) DBQ26_13245 PF04408 Helicase associated domain (HA2) DBQ26_13245 PF00271 Helicase conserved C-terminal domain DBQ26_13245 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DBQ26_13245 PF00270 DEAD/DEAH box helicase DBQ26_13250 PF10417 C-terminal domain of 1-Cys peroxiredoxin DBQ26_13250 PF00578 AhpC/TSA family DBQ26_13270 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_13270 PF13192 Thioredoxin domain DBQ26_13280 PF00043 Glutathione S-transferase, C-terminal domain DBQ26_13280 PF02798 Glutathione S-transferase, N-terminal domain DBQ26_13290 PF02390 Putative methyltransferase DBQ26_13295 PF13417 Glutathione S-transferase, N-terminal domain DBQ26_13295 PF00043 Glutathione S-transferase, C-terminal domain DBQ26_13320 PF01979 Amidohydrolase family DBQ26_13325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DBQ26_13325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DBQ26_13335 PF10672 S-adenosylmethionine-dependent methyltransferase DBQ26_13335 PF02926 THUMP domain DBQ26_13335 PF01170 Putative RNA methylase family UPF0020 DBQ26_13340 PF00665 Integrase core domain DBQ26_13340 PF13936 Helix-turn-helix domain DBQ26_13355 PF10431 C-terminal, D2-small domain, of ClpB protein DBQ26_13355 PF00004 ATPase family associated with various cellular activities (AAA) DBQ26_13355 PF02861 Clp amino terminal domain, pathogenicity island component DBQ26_13355 PF07724 AAA domain (Cdc48 subfamily) DBQ26_13355 PF17871 AAA lid domain DBQ26_13370 PF02566 OsmC-like protein DBQ26_13380 PF00027 Cyclic nucleotide-binding domain DBQ26_13380 PF13545 Crp-like helix-turn-helix domain DBQ26_13385 PF00248 Aldo/keto reductase family DBQ26_13400 PF00709 Adenylosuccinate synthetase DBQ26_13405 PF13393 Histidyl-tRNA synthetase DBQ26_13410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DBQ26_13410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DBQ26_13415 PF01411 tRNA synthetases class II (A) DBQ26_13415 PF02272 DHHA1 domain DBQ26_13415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DBQ26_13420 PF00589 Phage integrase family DBQ26_13420 PF13356 Arm DNA-binding domain DBQ26_13430 PF00717 Peptidase S24-like DBQ26_13435 PF13438 Domain of unknown function (DUF4113) DBQ26_13435 PF00817 impB/mucB/samB family DBQ26_13435 PF11799 impB/mucB/samB family C-terminal domain DBQ26_13440 PF13340 Putative transposase of IS4/5 family (DUF4096) DBQ26_13445 PF13823 Alcohol dehydrogenase GroES-associated DBQ26_13445 PF00107 Zinc-binding dehydrogenase DBQ26_13445 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_13470 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system DBQ26_13600 PF13936 Helix-turn-helix domain DBQ26_13600 PF00665 Integrase core domain DBQ26_13665 PF01842 ACT domain DBQ26_13665 PF13840 ACT domain DBQ26_13665 PF00696 Amino acid kinase family DBQ26_13670 PF02599 Global regulator protein family DBQ26_13675 PF01351 Ribonuclease HII DBQ26_13685 PF01292 Prokaryotic cytochrome b561 DBQ26_13690 PF00962 Adenosine/AMP deaminase DBQ26_13695 PF00860 Permease family DBQ26_13705 PF17954 Quercetinase C-terminal cupin domain DBQ26_13705 PF02678 Pirin DBQ26_13710 PF17932 Tetracyclin repressor-like, C-terminal domain DBQ26_13710 PF00440 Bacterial regulatory proteins, tetR family DBQ26_13730 PF05199 GMC oxidoreductase DBQ26_13735 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DBQ26_13735 PF18381 YcaO cyclodehydratase C-terminal domain DBQ26_13745 PF07690 Major Facilitator Superfamily DBQ26_13750 PF00884 Sulfatase DBQ26_13755 PF03781 Sulfatase-modifying factor enzyme 1 DBQ26_13765 PF00355 Rieske [2Fe-2S] domain DBQ26_13770 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_13770 PF00175 Oxidoreductase NAD-binding domain DBQ26_13780 PF13936 Helix-turn-helix domain DBQ26_13780 PF00665 Integrase core domain DBQ26_13790 PF14864 Alkyl sulfatase C-terminal DBQ26_13790 PF00753 Metallo-beta-lactamase superfamily DBQ26_13790 PF14863 Alkyl sulfatase dimerisation DBQ26_13795 PF00665 Integrase core domain DBQ26_13795 PF13936 Helix-turn-helix domain DBQ26_13810 PF07690 Major Facilitator Superfamily DBQ26_13815 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_13820 PF00171 Aldehyde dehydrogenase family DBQ26_13830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_13830 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_13830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_13835 PF03573 outer membrane porin, OprD family DBQ26_13850 PF07519 Tannase and feruloyl esterase DBQ26_13855 PF07729 FCD domain DBQ26_13855 PF00392 Bacterial regulatory proteins, gntR family DBQ26_13860 PF00171 Aldehyde dehydrogenase family DBQ26_13865 PF00701 Dihydrodipicolinate synthetase family DBQ26_13870 PF13378 Enolase C-terminal domain-like DBQ26_13875 PF07690 Major Facilitator Superfamily DBQ26_13880 PF08666 SAF domain DBQ26_13880 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DBQ26_13885 PF00892 EamA-like transporter family DBQ26_13890 PF12833 Helix-turn-helix domain DBQ26_13890 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DBQ26_13895 PF00171 Aldehyde dehydrogenase family DBQ26_13905 PF00324 Amino acid permease DBQ26_13910 PF04958 Arginine N-succinyltransferase beta subunit DBQ26_13915 PF00202 Aminotransferase class-III DBQ26_13925 PF00171 Aldehyde dehydrogenase family DBQ26_13935 PF00392 Bacterial regulatory proteins, gntR family DBQ26_13935 PF07729 FCD domain DBQ26_13945 PF00324 Amino acid permease DBQ26_13950 PF01266 FAD dependent oxidoreductase DBQ26_13955 PF00324 Amino acid permease DBQ26_13965 PF05643 Putative bacterial lipoprotein (DUF799) DBQ26_13975 PF03783 Curli production assembly/transport component CsgG DBQ26_13990 PF13333 Integrase core domain DBQ26_13990 PF13276 HTH-like domain DBQ26_13990 PF00665 Integrase core domain DBQ26_14000 PF05987 Bacterial protein of unknown function (DUF898) DBQ26_14020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DBQ26_14020 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_14025 PF00764 Arginosuccinate synthase DBQ26_14035 PF00872 Transposase, Mutator family DBQ26_14040 PF01979 Amidohydrolase family DBQ26_14045 PF00929 Exonuclease DBQ26_14055 PF00593 TonB dependent receptor DBQ26_14055 PF07715 TonB-dependent Receptor Plug Domain DBQ26_14065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DBQ26_14065 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_14070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DBQ26_14070 PF00005 ABC transporter DBQ26_14075 PF12911 N-terminal TM domain of oligopeptide transport permease C DBQ26_14075 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_14080 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_14085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DBQ26_14090 PF01476 LysM domain DBQ26_14090 PF01464 Transglycosylase SLT domain DBQ26_14095 PF00929 Exonuclease DBQ26_14105 PF00293 NUDIX domain DBQ26_14105 PF09297 NADH pyrophosphatase zinc ribbon domain DBQ26_14115 PF04972 BON domain DBQ26_14120 PF02021 Uncharacterised protein family UPF0102 DBQ26_14125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DBQ26_14135 PF03466 LysR substrate binding domain DBQ26_14135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_14140 PF01810 LysE type translocator DBQ26_14150 PF13411 MerR HTH family regulatory protein DBQ26_14160 PF01494 FAD binding domain DBQ26_14165 PF01494 FAD binding domain DBQ26_14170 PF05195 Aminopeptidase P, N-terminal domain DBQ26_14170 PF00557 Metallopeptidase family M24 DBQ26_14210 PF01812 5-formyltetrahydrofolate cyclo-ligase family DBQ26_14215 PF02190 ATP-dependent protease La (LON) substrate-binding domain DBQ26_14215 PF05362 Lon protease (S16) C-terminal proteolytic domain DBQ26_14215 PF00004 ATPase family associated with various cellular activities (AAA) DBQ26_14220 PF02590 Predicted SPOUT methyltransferase DBQ26_14225 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DBQ26_14235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DBQ26_14235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DBQ26_14240 PF04060 Putative Fe-S cluster DBQ26_14245 PF00730 HhH-GPD superfamily base excision DNA repair protein DBQ26_14245 PF00633 Helix-hairpin-helix motif DBQ26_14245 PF10576 Iron-sulfur binding domain of endonuclease III DBQ26_14255 PF05191 Adenylate kinase, active site lid DBQ26_14270 PF03717 Penicillin-binding Protein dimerisation domain DBQ26_14270 PF00905 Penicillin binding protein transpeptidase domain DBQ26_14285 PF02492 CobW/HypB/UreG, nucleotide-binding domain DBQ26_14290 PF01730 UreF DBQ26_14295 PF05194 UreE urease accessory protein, C-terminal domain DBQ26_14295 PF02814 UreE urease accessory protein, N-terminal domain DBQ26_14300 PF00449 Urease alpha-subunit, N-terminal domain DBQ26_14300 PF01979 Amidohydrolase family DBQ26_14310 PF00699 Urease beta subunit DBQ26_14315 PF00547 Urease, gamma subunit DBQ26_14320 PF01774 UreD urease accessory protein DBQ26_14330 PF04170 NlpE N-terminal domain DBQ26_14330 PF17185 NlpE C-terminal OB domain DBQ26_14335 PF00463 Isocitrate lyase family DBQ26_14340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_14340 PF03466 LysR substrate binding domain DBQ26_14345 PF00571 CBS domain DBQ26_14345 PF03471 Transporter associated domain DBQ26_14345 PF01595 Cyclin M transmembrane N-terminal domain DBQ26_14350 PF03600 Citrate transporter DBQ26_14365 PF00009 Elongation factor Tu GTP binding domain DBQ26_14370 PF01507 Phosphoadenosine phosphosulfate reductase family DBQ26_14380 PF14052 Capsule assembly protein Wzi DBQ26_14385 PF00152 tRNA synthetases class II (D, K and N) DBQ26_14385 PF01336 OB-fold nucleic acid binding domain DBQ26_14400 PF00301 Rubredoxin DBQ26_14405 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_14405 PF18113 Rubredoxin binding C-terminal domain DBQ26_14410 PF00561 alpha/beta hydrolase fold DBQ26_14415 PF03466 LysR substrate binding domain DBQ26_14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_14430 PF02503 Polyphosphate kinase middle domain DBQ26_14430 PF13089 Polyphosphate kinase N-terminal domain DBQ26_14430 PF17941 Polyphosphate kinase C-terminal domain 1 DBQ26_14430 PF13090 Polyphosphate kinase C-terminal domain 2 DBQ26_14435 PF00912 Transglycosylase DBQ26_14440 PF01694 Rhomboid family DBQ26_14450 PF00005 ABC transporter DBQ26_14455 PF13472 GDSL-like Lipase/Acylhydrolase family DBQ26_14460 PF00484 Carbonic anhydrase DBQ26_14465 PF00561 alpha/beta hydrolase fold DBQ26_14475 PF00593 TonB dependent receptor DBQ26_14475 PF07715 TonB-dependent Receptor Plug Domain DBQ26_14480 PF01521 Iron-sulphur cluster biosynthesis DBQ26_14480 PF01106 NifU-like domain DBQ26_14490 PF00884 Sulfatase DBQ26_14495 PF03781 Sulfatase-modifying factor enzyme 1 DBQ26_14510 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_14515 PF01384 Phosphate transporter family DBQ26_14520 PF02310 B12 binding domain DBQ26_14520 PF02607 B12 binding domain DBQ26_14520 PF00809 Pterin binding enzyme DBQ26_14520 PF02965 Vitamin B12 dependent methionine synthase, activation domain DBQ26_14520 PF02574 Homocysteine S-methyltransferase DBQ26_14540 PF01263 Aldose 1-epimerase DBQ26_14545 PF07690 Major Facilitator Superfamily DBQ26_14550 PF02311 AraC-like ligand binding domain DBQ26_14550 PF12833 Helix-turn-helix domain DBQ26_14555 PF04960 Glutaminase DBQ26_14560 PF01327 Polypeptide deformylase DBQ26_14565 PF07690 Major Facilitator Superfamily DBQ26_14575 PF00205 Thiamine pyrophosphate enzyme, central domain DBQ26_14575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DBQ26_14575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DBQ26_14580 PF00171 Aldehyde dehydrogenase family DBQ26_14585 PF01958 Domain of unknown function DUF108 DBQ26_14585 PF03447 Homoserine dehydrogenase, NAD binding domain DBQ26_14595 PF12697 Alpha/beta hydrolase family DBQ26_14605 PF07690 Major Facilitator Superfamily DBQ26_14610 PF14759 Reductase C-terminal DBQ26_14610 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_14615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DBQ26_14625 PF00355 Rieske [2Fe-2S] domain DBQ26_14635 PF00355 Rieske [2Fe-2S] domain DBQ26_14640 PF09339 IclR helix-turn-helix domain DBQ26_14640 PF01614 Bacterial transcriptional regulator DBQ26_14665 PF00535 Glycosyl transferase family 2 DBQ26_14670 PF01522 Polysaccharide deacetylase DBQ26_14670 PF14883 Hypothetical glycosyl hydrolase family 13 DBQ26_14675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DBQ26_14680 PF07152 YaeQ protein DBQ26_14685 PF00375 Sodium:dicarboxylate symporter family DBQ26_14690 PF02492 CobW/HypB/UreG, nucleotide-binding domain DBQ26_14690 PF07683 Cobalamin synthesis protein cobW C-terminal domain DBQ26_14700 PF03061 Thioesterase superfamily DBQ26_14710 PF02028 BCCT, betaine/carnitine/choline family transporter DBQ26_14715 PF02028 BCCT, betaine/carnitine/choline family transporter DBQ26_14720 PF13977 BetI-type transcriptional repressor, C-terminal DBQ26_14720 PF00440 Bacterial regulatory proteins, tetR family DBQ26_14725 PF00171 Aldehyde dehydrogenase family DBQ26_14730 PF05199 GMC oxidoreductase DBQ26_14730 PF00732 GMC oxidoreductase DBQ26_14735 PF13737 Transposase DDE domain DBQ26_14745 PF06039 Malate:quinone oxidoreductase (Mqo) DBQ26_14755 PF02574 Homocysteine S-methyltransferase DBQ26_14760 PF13520 Amino acid permease DBQ26_14785 PF01126 Heme oxygenase DBQ26_14805 PF00593 TonB dependent receptor DBQ26_14805 PF07715 TonB-dependent Receptor Plug Domain DBQ26_14815 PF04542 Sigma-70 region 2 DBQ26_14815 PF08281 Sigma-70, region 4 DBQ26_14825 PF00701 Dihydrodipicolinate synthetase family DBQ26_14830 PF00083 Sugar (and other) transporter DBQ26_14845 PF13936 Helix-turn-helix domain DBQ26_14845 PF00665 Integrase core domain DBQ26_14865 PF00665 Integrase core domain DBQ26_14865 PF13936 Helix-turn-helix domain DBQ26_14885 PF07690 Major Facilitator Superfamily DBQ26_14890 PF13533 Biotin-lipoyl like DBQ26_14895 PF03061 Thioesterase superfamily DBQ26_14900 PF00490 Delta-aminolevulinic acid dehydratase DBQ26_14905 PF01266 FAD dependent oxidoreductase DBQ26_14910 PF01370 NAD dependent epimerase/dehydratase family DBQ26_14910 PF08338 Domain of unknown function (DUF1731) DBQ26_14930 PF12320 Type 5 capsule protein repressor C-terminal domain DBQ26_14930 PF00149 Calcineurin-like phosphoesterase DBQ26_14940 PF01168 Alanine racemase, N-terminal domain DBQ26_14945 PF00437 Type II/IV secretion system protein DBQ26_14950 PF00437 Type II/IV secretion system protein DBQ26_14955 PF01475 Ferric uptake regulator family DBQ26_14960 PF04355 SmpA / OmlA family DBQ26_14965 PF03658 RnfH family Ubiquitin DBQ26_14980 PF01814 Hemerythrin HHE cation binding domain DBQ26_14985 PF13936 Helix-turn-helix domain DBQ26_14985 PF00665 Integrase core domain DBQ26_14990 PF13230 Glutamine amidotransferases class-II DBQ26_15000 PF00696 Amino acid kinase family DBQ26_15005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DBQ26_15005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DBQ26_15005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DBQ26_15005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DBQ26_15010 PF00692 dUTPase DBQ26_15015 PF13361 UvrD-like helicase C-terminal domain DBQ26_15015 PF00580 UvrD/REP helicase N-terminal domain DBQ26_15020 PF00691 OmpA family DBQ26_15020 PF13488 Glycine zipper DBQ26_15025 PF01553 Acyltransferase DBQ26_15035 PF03775 Septum formation inhibitor MinC, C-terminal domain DBQ26_15040 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DBQ26_15045 PF03776 Septum formation topological specificity factor MinE DBQ26_15070 PF03050 Transposase IS66 family DBQ26_15070 PF13817 IS66 C-terminal element DBQ26_15070 PF13005 zinc-finger binding domain of transposase IS66 DBQ26_15070 PF13007 Transposase C of IS166 homeodomain DBQ26_15075 PF01810 LysE type translocator DBQ26_15080 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DBQ26_15080 PF01580 FtsK/SpoIIIE family DBQ26_15080 PF09397 Ftsk gamma domain DBQ26_15080 PF17854 FtsK alpha domain DBQ26_15085 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_15090 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DBQ26_15095 PF04376 Arginine-tRNA-protein transferase, N terminus DBQ26_15095 PF04377 Arginine-tRNA-protein transferase, C terminus DBQ26_15100 PF00583 Acetyltransferase (GNAT) family DBQ26_15115 PF03144 Elongation factor Tu domain 2 DBQ26_15115 PF00009 Elongation factor Tu GTP binding domain DBQ26_15115 PF03143 Elongation factor Tu C-terminal domain DBQ26_15120 PF00679 Elongation factor G C-terminus DBQ26_15120 PF14492 Elongation Factor G, domain II DBQ26_15120 PF03764 Elongation factor G, domain IV DBQ26_15120 PF03144 Elongation factor Tu domain 2 DBQ26_15120 PF00009 Elongation factor Tu GTP binding domain DBQ26_15125 PF00177 Ribosomal protein S7p/S5e DBQ26_15130 PF00164 Ribosomal protein S12/S23 DBQ26_15140 PF00109 Beta-ketoacyl synthase, N-terminal domain DBQ26_15140 PF02801 Beta-ketoacyl synthase, C-terminal domain DBQ26_15155 PF00795 Carbon-nitrogen hydrolase DBQ26_15155 PF02540 NAD synthase DBQ26_15170 PF00175 Oxidoreductase NAD-binding domain DBQ26_15170 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_15170 PF00970 Oxidoreductase FAD-binding domain DBQ26_15175 PF00171 Aldehyde dehydrogenase family DBQ26_15180 PF00355 Rieske [2Fe-2S] domain DBQ26_15180 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DBQ26_15185 PF07859 alpha/beta hydrolase fold DBQ26_15190 PF02028 BCCT, betaine/carnitine/choline family transporter DBQ26_15195 PF00180 Isocitrate/isopropylmalate dehydrogenase DBQ26_15200 PF03466 LysR substrate binding domain DBQ26_15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_15220 PF00037 4Fe-4S binding domain DBQ26_15225 PF01467 Cytidylyltransferase-like DBQ26_15230 PF01668 SmpB protein DBQ26_15235 PF03358 NADPH-dependent FMN reductase DBQ26_15245 PF00849 RNA pseudouridylate synthase DBQ26_15245 PF01479 S4 domain DBQ26_15250 PF13525 Outer membrane lipoprotein DBQ26_15255 PF10410 DnaB-helicase binding domain of primase DBQ26_15255 PF01807 CHC2 zinc finger DBQ26_15255 PF08278 DNA primase DnaG DnaB-binding DBQ26_15255 PF08275 DNA primase catalytic core, N-terminal domain DBQ26_15260 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DBQ26_15260 PF01488 Shikimate / quinate 5-dehydrogenase DBQ26_15260 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DBQ26_15270 PF03550 Outer membrane lipoprotein LolB DBQ26_15275 PF00288 GHMP kinases N terminal domain DBQ26_15275 PF08544 GHMP kinases C terminal DBQ26_15300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DBQ26_15300 PF14572 Phosphoribosyl synthetase-associated domain DBQ26_15305 PF01386 Ribosomal L25p family DBQ26_15310 PF01195 Peptidyl-tRNA hydrolase DBQ26_15315 PF02261 Aspartate decarboxylase DBQ26_15330 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DBQ26_15340 PF02581 Thiamine monophosphate synthase DBQ26_15340 PF03070 TENA/THI-4/PQQC family DBQ26_15340 PF08543 Phosphomethylpyrimidine kinase DBQ26_15345 PF04972 BON domain DBQ26_15345 PF01476 LysM domain DBQ26_15350 PF00550 Phosphopantetheine attachment site DBQ26_15360 PF00698 Acyl transferase domain DBQ26_15365 PF01783 Ribosomal L32p protein family DBQ26_15370 PF02620 Large ribosomal RNA subunit accumulation protein YceD DBQ26_15375 PF04315 Elongation factor P hydroxylase DBQ26_15380 PF01300 Telomere recombination DBQ26_15385 PF02616 Segregation and condensation protein ScpA DBQ26_15390 PF04079 Segregation and condensation complex subunit ScpB DBQ26_15395 PF00849 RNA pseudouridylate synthase DBQ26_15395 PF01479 S4 domain DBQ26_15410 PF00155 Aminotransferase class I and II DBQ26_15415 PF04055 Radical SAM superfamily DBQ26_15415 PF00202 Aminotransferase class-III DBQ26_15415 PF06968 Biotin and Thiamin Synthesis associated domain DBQ26_15420 PF08241 Methyltransferase domain DBQ26_15420 PF12697 Alpha/beta hydrolase family DBQ26_15425 PF02358 Trehalose-phosphatase DBQ26_15430 PF00982 Glycosyltransferase family 20 DBQ26_15435 PF07690 Major Facilitator Superfamily DBQ26_15440 PF00210 Ferritin-like domain DBQ26_15445 PF00533 BRCA1 C Terminus (BRCT) domain DBQ26_15445 PF03120 NAD-dependent DNA ligase OB-fold domain DBQ26_15445 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DBQ26_15445 PF01653 NAD-dependent DNA ligase adenylation domain DBQ26_15445 PF12826 Helix-hairpin-helix motif DBQ26_15455 PF02463 RecF/RecN/SMC N terminal domain DBQ26_15455 PF06470 SMC proteins Flexible Hinge Domain DBQ26_15465 PF01925 Sulfite exporter TauE/SafE DBQ26_15475 PF03309 Type III pantothenate kinase DBQ26_15480 PF00448 SRP54-type protein, GTPase domain DBQ26_15480 PF02881 SRP54-type protein, helical bundle domain DBQ26_15480 PF02978 Signal peptide binding domain DBQ26_15490 PF01207 Dihydrouridine synthase (Dus) DBQ26_15525 PF00692 dUTPase DBQ26_15540 PF01048 Phosphorylase superfamily DBQ26_15545 PF10609 NUBPL iron-transfer P-loop NTPase DBQ26_15555 PF01588 Putative tRNA binding domain DBQ26_15555 PF09334 tRNA synthetases class I (M) DBQ26_15585 PF13533 Biotin-lipoyl like DBQ26_15590 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_15605 PF05552 Conserved TM helix DBQ26_15620 PF00175 Oxidoreductase NAD-binding domain DBQ26_15620 PF00970 Oxidoreductase FAD-binding domain DBQ26_15625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_15625 PF03466 LysR substrate binding domain DBQ26_15640 PF00361 Proton-conducting membrane transporter DBQ26_15645 PF00361 Proton-conducting membrane transporter DBQ26_15650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DBQ26_15650 PF00361 Proton-conducting membrane transporter DBQ26_15655 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DBQ26_15660 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DBQ26_15665 PF12838 4Fe-4S dicluster domain DBQ26_15670 PF00146 NADH dehydrogenase DBQ26_15675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DBQ26_15675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DBQ26_15675 PF00384 Molybdopterin oxidoreductase DBQ26_15680 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DBQ26_15680 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DBQ26_15680 PF10531 SLBB domain DBQ26_15690 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DBQ26_15690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DBQ26_15695 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DBQ26_15700 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DBQ26_15705 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_15715 PF00672 HAMP domain DBQ26_15715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_15715 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_15720 PF00072 Response regulator receiver domain DBQ26_15720 PF00486 Transcriptional regulatory protein, C terminal DBQ26_15725 PF03477 ATP cone domain DBQ26_15725 PF02867 Ribonucleotide reductase, barrel domain DBQ26_15725 PF00317 Ribonucleotide reductase, all-alpha domain DBQ26_15735 PF00268 Ribonucleotide reductase, small chain DBQ26_15740 PF13737 Transposase DDE domain DBQ26_15765 PF01613 Flavin reductase like domain DBQ26_15770 PF01717 Cobalamin-independent synthase, Catalytic domain DBQ26_15770 PF08267 Cobalamin-independent synthase, N-terminal domain DBQ26_15780 PF03466 LysR substrate binding domain DBQ26_15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_15785 PF01810 LysE type translocator DBQ26_15795 PF12833 Helix-turn-helix domain DBQ26_15795 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DBQ26_15800 PF07687 Peptidase dimerisation domain DBQ26_15800 PF01546 Peptidase family M20/M25/M40 DBQ26_15815 PF01970 Tripartite tricarboxylate transporter TctA family DBQ26_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_15830 PF03466 LysR substrate binding domain DBQ26_15840 PF07690 Major Facilitator Superfamily DBQ26_15850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_15850 PF03466 LysR substrate binding domain DBQ26_15855 PF00890 FAD binding domain DBQ26_15855 PF14537 Cytochrome c3 DBQ26_15870 PF17932 Tetracyclin repressor-like, C-terminal domain DBQ26_15870 PF00440 Bacterial regulatory proteins, tetR family DBQ26_15880 PF02515 CoA-transferase family III DBQ26_15885 PF07690 Major Facilitator Superfamily DBQ26_15890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_15890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_15890 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_15895 PF03466 LysR substrate binding domain DBQ26_15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_15900 PF00107 Zinc-binding dehydrogenase DBQ26_15900 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_15905 PF00962 Adenosine/AMP deaminase DBQ26_15935 PF02445 Quinolinate synthetase A protein DBQ26_15940 PF01960 ArgJ family DBQ26_15945 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DBQ26_15945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DBQ26_15950 PF00893 Small Multidrug Resistance protein DBQ26_15965 PF00394 Multicopper oxidase DBQ26_15965 PF07731 Multicopper oxidase DBQ26_15965 PF07732 Multicopper oxidase DBQ26_15980 PF00834 Ribulose-phosphate 3 epimerase family DBQ26_15990 PF00756 Putative esterase DBQ26_16000 PF04445 Putative SAM-dependent methyltransferase DBQ26_16005 PF00814 Glycoprotease family DBQ26_16010 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_16015 PF00293 NUDIX domain DBQ26_16035 PF13737 Transposase DDE domain DBQ26_16045 PF04715 Anthranilate synthase component I, N terminal region DBQ26_16045 PF00425 chorismate binding enzyme DBQ26_16050 PF00155 Aminotransferase class I and II DBQ26_16055 PF00815 Histidinol dehydrogenase DBQ26_16060 PF01634 ATP phosphoribosyltransferase DBQ26_16065 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DBQ26_16070 PF01722 BolA-like protein DBQ26_16075 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DBQ26_16080 PF04552 Sigma-54, DNA binding domain DBQ26_16080 PF04963 Sigma-54 factor, core binding domain DBQ26_16080 PF00309 Sigma-54 factor, Activator interacting domain (AID) DBQ26_16125 PF00795 Carbon-nitrogen hydrolase DBQ26_16135 PF01047 MarR family DBQ26_16140 PF02566 OsmC-like protein DBQ26_16145 PF00437 Type II/IV secretion system protein DBQ26_16165 PF01367 5'-3' exonuclease, C-terminal SAM fold DBQ26_16165 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DBQ26_16165 PF00476 DNA polymerase family A DBQ26_16165 PF01612 3'-5' exonuclease DBQ26_16170 PF02325 YGGT family DBQ26_16175 PF14748 Pyrroline-5-carboxylate reductase dimerisation DBQ26_16175 PF03807 NADP oxidoreductase coenzyme F420-dependent DBQ26_16180 PF09179 TilS substrate binding domain DBQ26_16180 PF01171 PP-loop family DBQ26_16180 PF11734 TilS substrate C-terminal domain DBQ26_16185 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DBQ26_16190 PF02541 Ppx/GppA phosphatase family DBQ26_16195 PF00085 Thioredoxin DBQ26_16200 PF07497 Rho termination factor, RNA-binding domain DBQ26_16200 PF07498 Rho termination factor, N-terminal domain DBQ26_16200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DBQ26_16215 PF00216 Bacterial DNA-binding protein DBQ26_16220 PF01588 Putative tRNA binding domain DBQ26_16220 PF03483 B3/4 domain DBQ26_16220 PF03484 tRNA synthetase B5 domain DBQ26_16220 PF03147 Ferredoxin-fold anticodon binding domain DBQ26_16220 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DBQ26_16225 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DBQ26_16225 PF01409 tRNA synthetases class II core domain (F) DBQ26_16245 PF00453 Ribosomal protein L20 DBQ26_16250 PF01632 Ribosomal protein L35 DBQ26_16260 PF07690 Major Facilitator Superfamily DBQ26_16265 PF09335 SNARE associated Golgi protein DBQ26_16270 PF00043 Glutathione S-transferase, C-terminal domain DBQ26_16270 PF02798 Glutathione S-transferase, N-terminal domain DBQ26_16280 PF05198 Translation initiation factor IF-3, N-terminal domain DBQ26_16280 PF00707 Translation initiation factor IF-3, C-terminal domain DBQ26_16285 PF02824 TGS domain DBQ26_16285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DBQ26_16285 PF03129 Anticodon binding domain DBQ26_16285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DBQ26_16290 PF13193 AMP-binding enzyme C-terminal domain DBQ26_16290 PF00501 AMP-binding enzyme DBQ26_16295 PF04751 Protein of unknown function (DUF615) DBQ26_16300 PF00381 PTS HPr component phosphorylation site DBQ26_16305 PF03668 P-loop ATPase protein family DBQ26_16310 PF02569 Pantoate-beta-alanine ligase DBQ26_16315 PF02548 Ketopantoate hydroxymethyltransferase DBQ26_16320 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DBQ26_16325 PF12627 Probable RNA and SrmB- binding site of polymerase A DBQ26_16325 PF01743 Poly A polymerase head domain DBQ26_16325 PF12626 Polymerase A arginine-rich C-terminus DBQ26_16335 PF03819 MazG nucleotide pyrophosphohydrolase domain DBQ26_16340 PF00106 short chain dehydrogenase DBQ26_16345 PF13291 ACT domain DBQ26_16345 PF04607 Region found in RelA / SpoT proteins DBQ26_16345 PF02824 TGS domain DBQ26_16350 PF05958 tRNA (Uracil-5-)-methyltransferase DBQ26_16360 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_16365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DBQ26_16365 PF01627 Hpt domain DBQ26_16365 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_16365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_16365 PF00672 HAMP domain DBQ26_16365 PF00072 Response regulator receiver domain DBQ26_16370 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_16375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DBQ26_16375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DBQ26_16380 PF01261 Xylose isomerase-like TIM barrel DBQ26_16390 PF00106 short chain dehydrogenase DBQ26_16395 PF02233 NAD(P) transhydrogenase beta subunit DBQ26_16400 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DBQ26_16405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DBQ26_16405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DBQ26_16410 PF00892 EamA-like transporter family DBQ26_16420 PF07690 Major Facilitator Superfamily DBQ26_16435 PF12833 Helix-turn-helix domain DBQ26_16435 PF02311 AraC-like ligand binding domain DBQ26_16440 PF01625 Peptide methionine sulfoxide reductase DBQ26_16445 PF00462 Glutaredoxin DBQ26_16450 PF01641 SelR domain DBQ26_16460 PF01625 Peptide methionine sulfoxide reductase DBQ26_16465 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_16465 PF08448 PAS fold DBQ26_16495 PF00580 UvrD/REP helicase N-terminal domain DBQ26_16495 PF13361 UvrD-like helicase C-terminal domain DBQ26_16510 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DBQ26_16530 PF00462 Glutaredoxin DBQ26_16535 PF00111 2Fe-2S iron-sulfur cluster binding domain DBQ26_16535 PF00175 Oxidoreductase NAD-binding domain DBQ26_16535 PF00970 Oxidoreductase FAD-binding domain DBQ26_16540 PF00174 Oxidoreductase molybdopterin binding domain DBQ26_16565 PF00107 Zinc-binding dehydrogenase DBQ26_16565 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_16580 PF00043 Glutathione S-transferase, C-terminal domain DBQ26_16580 PF02798 Glutathione S-transferase, N-terminal domain DBQ26_16585 PF01625 Peptide methionine sulfoxide reductase DBQ26_16605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DBQ26_16605 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_16620 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DBQ26_16620 PF18766 SWI2/SNF2 ATPase DBQ26_16620 PF11867 Domain of unknown function (DUF3387) DBQ26_16630 PF01420 Type I restriction modification DNA specificity domain DBQ26_16635 PF17191 RecG wedge domain DBQ26_16635 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DBQ26_16635 PF00270 DEAD/DEAH box helicase DBQ26_16640 PF02384 N-6 DNA Methylase DBQ26_16710 PF00589 Phage integrase family DBQ26_16715 PF01207 Dihydrouridine synthase (Dus) DBQ26_16725 PF03466 LysR substrate binding domain DBQ26_16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_16735 PF00899 ThiF family DBQ26_16745 PF00330 Aconitase family (aconitate hydratase) DBQ26_16745 PF00694 Aconitase C-terminal domain DBQ26_16750 PF01026 TatD related DNase DBQ26_16765 PF00009 Elongation factor Tu GTP binding domain DBQ26_16765 PF03144 Elongation factor Tu domain 2 DBQ26_16765 PF16658 Class II release factor RF3, C-terminal domain DBQ26_16780 PF00665 Integrase core domain DBQ26_16780 PF13936 Helix-turn-helix domain DBQ26_16790 PF03707 Bacterial signalling protein N terminal repeat DBQ26_16790 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_16790 PF00563 EAL domain DBQ26_16795 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DBQ26_16795 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DBQ26_16800 PF10369 Small subunit of acetolactate synthase DBQ26_16805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DBQ26_16805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DBQ26_16805 PF00205 Thiamine pyrophosphate enzyme, central domain DBQ26_16810 PF09334 tRNA synthetases class I (M) DBQ26_16810 PF08264 Anticodon-binding domain of tRNA DBQ26_16810 PF13603 Leucyl-tRNA synthetase, Domain 2 DBQ26_16810 PF00133 tRNA synthetases class I (I, L, M and V) DBQ26_16825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DBQ26_16830 PF02687 FtsX-like permease family DBQ26_16830 PF12704 MacB-like periplasmic core domain DBQ26_16830 PF00005 ABC transporter DBQ26_16835 PF02321 Outer membrane efflux protein DBQ26_16850 PF00929 Exonuclease DBQ26_16855 PF03193 RsgA GTPase DBQ26_16865 PF00462 Glutaredoxin DBQ26_16870 PF02556 Preprotein translocase subunit SecB DBQ26_16880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DBQ26_16880 PF01926 50S ribosome-binding GTPase DBQ26_16885 PF13360 PQQ-like domain DBQ26_16885 PF01011 PQQ enzyme repeat DBQ26_16895 PF13393 Histidyl-tRNA synthetase DBQ26_16895 PF03129 Anticodon binding domain DBQ26_16900 PF04551 GcpE protein DBQ26_16905 PF13464 Domain of unknown function (DUF4115) DBQ26_16915 PF04055 Radical SAM superfamily DBQ26_16920 PF00334 Nucleoside diphosphate kinase DBQ26_16925 PF04384 Iron-sulphur cluster assembly DBQ26_16930 PF01569 PAP2 superfamily DBQ26_16935 PF13439 Glycosyltransferase Family 4 DBQ26_16935 PF00534 Glycosyl transferases group 1 DBQ26_16940 PF00595 PDZ domain DBQ26_16940 PF11818 C-terminal domain of tail specific protease (DUF3340) DBQ26_16940 PF17804 Tail specific protease N-terminal domain DBQ26_16940 PF03572 Peptidase family S41 DBQ26_16945 PF00933 Glycosyl hydrolase family 3 N terminal domain DBQ26_16960 PF13737 Transposase DDE domain DBQ26_16970 PF00171 Aldehyde dehydrogenase family DBQ26_16975 PF00171 Aldehyde dehydrogenase family DBQ26_16980 PF01202 Shikimate kinase DBQ26_16985 PF02447 GntP family permease DBQ26_16990 PF01081 KDPG and KHG aldolase DBQ26_16995 PF00920 Dehydratase family DBQ26_17005 PF00871 Acetokinase family DBQ26_17010 PF07085 DRTGG domain DBQ26_17010 PF01515 Phosphate acetyl/butaryl transferase DBQ26_17015 PF05681 Fumarate hydratase (Fumerase) DBQ26_17015 PF05683 Fumarase C-terminus DBQ26_17030 PF07724 AAA domain (Cdc48 subfamily) DBQ26_17030 PF06689 ClpX C4-type zinc finger DBQ26_17030 PF10431 C-terminal, D2-small domain, of ClpB protein DBQ26_17035 PF00574 Clp protease DBQ26_17040 PF05698 Bacterial trigger factor protein (TF) C-terminus DBQ26_17040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DBQ26_17040 PF05697 Bacterial trigger factor protein (TF) DBQ26_17045 PF07715 TonB-dependent Receptor Plug Domain DBQ26_17045 PF00593 TonB dependent receptor DBQ26_17050 PF18331 PKHD-type hydroxylase C-terminal domain DBQ26_17050 PF13640 2OG-Fe(II) oxygenase superfamily DBQ26_17055 PF00682 HMGL-like DBQ26_17055 PF08502 LeuA allosteric (dimerisation) domain DBQ26_17060 PF00561 alpha/beta hydrolase fold DBQ26_17065 PF00561 alpha/beta hydrolase fold DBQ26_17065 PF07021 Methionine biosynthesis protein MetW DBQ26_17075 PF01725 Ham1 family DBQ26_17085 PF02416 mttA/Hcf106 family DBQ26_17090 PF02416 mttA/Hcf106 family DBQ26_17095 PF00902 Sec-independent protein translocase protein (TatC) DBQ26_17115 PF01790 Prolipoprotein diacylglyceryl transferase DBQ26_17130 PF00303 Thymidylate synthase DBQ26_17135 PF00186 Dihydrofolate reductase DBQ26_17145 PF01625 Peptide methionine sulfoxide reductase DBQ26_17155 PF01618 MotA/TolQ/ExbB proton channel family DBQ26_17165 PF01842 ACT domain DBQ26_17165 PF00551 Formyl transferase DBQ26_17175 PF00171 Aldehyde dehydrogenase family DBQ26_17180 PF00830 Ribosomal L28 family DBQ26_17185 PF00471 Ribosomal protein L33 DBQ26_17190 PF02254 TrkA-N domain DBQ26_17190 PF00999 Sodium/hydrogen exchanger family DBQ26_17210 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DBQ26_17215 PF00580 UvrD/REP helicase N-terminal domain DBQ26_17215 PF13361 UvrD-like helicase C-terminal domain DBQ26_17230 PF01751 Toprim domain DBQ26_17230 PF01131 DNA topoisomerase DBQ26_17230 PF01396 Topoisomerase DNA binding C4 zinc finger DBQ26_17230 PF08272 Topoisomerase I zinc-ribbon-like DBQ26_17240 PF01638 HxlR-like helix-turn-helix DBQ26_17245 PF00107 Zinc-binding dehydrogenase DBQ26_17245 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_17250 PF04102 SlyX DBQ26_17265 PF03279 Bacterial lipid A biosynthesis acyltransferase DBQ26_17275 PF00375 Sodium:dicarboxylate symporter family DBQ26_17285 PF01118 Semialdehyde dehydrogenase, NAD binding domain DBQ26_17285 PF02774 Semialdehyde dehydrogenase, dimerisation domain DBQ26_17305 PF01416 tRNA pseudouridine synthase DBQ26_17315 PF01176 Translation initiation factor 1A / IF-1 DBQ26_17330 PF00180 Isocitrate/isopropylmalate dehydrogenase DBQ26_17340 PF00694 Aconitase C-terminal domain DBQ26_17345 PF00330 Aconitase family (aconitate hydratase) DBQ26_17355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_17355 PF03466 LysR substrate binding domain DBQ26_17375 PF00293 NUDIX domain DBQ26_17380 PF01590 GAF domain DBQ26_17380 PF02896 PEP-utilising enzyme, TIM barrel domain DBQ26_17380 PF00391 PEP-utilising enzyme, mobile domain DBQ26_17380 PF05524 PEP-utilising enzyme, N-terminal DBQ26_17385 PF00141 Peroxidase DBQ26_17390 PF12706 Beta-lactamase superfamily domain DBQ26_17395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_17395 PF03466 LysR substrate binding domain DBQ26_17405 PF02798 Glutathione S-transferase, N-terminal domain DBQ26_17410 PF08279 HTH domain DBQ26_17410 PF13280 WYL domain DBQ26_17415 PF13419 Haloacid dehalogenase-like hydrolase DBQ26_17420 PF00849 RNA pseudouridylate synthase DBQ26_17420 PF01479 S4 domain DBQ26_17430 PF12111 Polyribonucleotide phosphorylase C terminal DBQ26_17430 PF10150 Ribonuclease E/G family DBQ26_17430 PF00575 S1 RNA binding domain DBQ26_17435 PF00501 AMP-binding enzyme DBQ26_17435 PF13193 AMP-binding enzyme C-terminal domain DBQ26_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_17450 PF03466 LysR substrate binding domain DBQ26_17460 PF06969 HemN C-terminal domain DBQ26_17460 PF04055 Radical SAM superfamily DBQ26_17470 PF01554 MatE DBQ26_17475 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_17475 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_17475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_17480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_17480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_17485 PF03109 ABC1 family DBQ26_17490 PF01197 Ribosomal protein L31 DBQ26_17500 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DBQ26_17510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DBQ26_17510 PF07992 Pyridine nucleotide-disulphide oxidoreductase DBQ26_17510 PF13247 4Fe-4S dicluster domain DBQ26_17520 PF03884 DNA gyrase inhibitor YacG DBQ26_17525 PF00753 Metallo-beta-lactamase superfamily DBQ26_17530 PF00762 Ferrochelatase DBQ26_17540 PF01177 Asp/Glu/Hydantoin racemase DBQ26_17560 PF01206 Sulfurtransferase TusA DBQ26_17565 PF03471 Transporter associated domain DBQ26_17565 PF00571 CBS domain DBQ26_17570 PF00795 Carbon-nitrogen hydrolase DBQ26_17575 PF01588 Putative tRNA binding domain DBQ26_17585 PF07963 Prokaryotic N-terminal methylation motif DBQ26_17585 PF08334 Type II secretion system (T2SS), protein G DBQ26_17590 PF00482 Type II secretion system (T2SS), protein F DBQ26_17595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DBQ26_17595 PF18074 Primosomal protein N C-terminal domain DBQ26_17595 PF00270 DEAD/DEAH box helicase DBQ26_17595 PF00271 Helicase conserved C-terminal domain DBQ26_17595 PF17764 3′ DNA-binding domain (3′BD) DBQ26_17600 PF00999 Sodium/hydrogen exchanger family DBQ26_17600 PF02254 TrkA-N domain DBQ26_17605 PF01430 Hsp33 protein DBQ26_17615 PF01556 DnaJ C terminal domain DBQ26_17615 PF00226 DnaJ domain DBQ26_17625 PF01544 CorA-like Mg2+ transporter protein DBQ26_17630 PF01138 3' exoribonuclease family, domain 1 DBQ26_17630 PF00013 KH domain DBQ26_17630 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DBQ26_17630 PF03725 3' exoribonuclease family, domain 2 DBQ26_17630 PF00575 S1 RNA binding domain DBQ26_17635 PF00312 Ribosomal protein S15 DBQ26_17645 PF13538 UvrD-like helicase C-terminal domain DBQ26_17650 PF00580 UvrD/REP helicase N-terminal domain DBQ26_17650 PF12705 PD-(D/E)XK nuclease superfamily DBQ26_17650 PF13361 UvrD-like helicase C-terminal domain DBQ26_17655 PF17946 RecC C-terminal domain DBQ26_17665 PF03976 Polyphosphate kinase 2 (PPK2) DBQ26_17675 PF01209 ubiE/COQ5 methyltransferase family DBQ26_17685 PF03109 ABC1 family DBQ26_17690 PF01494 FAD binding domain DBQ26_17695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DBQ26_17700 PF01502 Phosphoribosyl-AMP cyclohydrolase DBQ26_17715 PF13244 Domain of unknown function (DUF4040) DBQ26_17715 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DBQ26_17715 PF00361 Proton-conducting membrane transporter DBQ26_17715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DBQ26_17720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DBQ26_17725 PF00361 Proton-conducting membrane transporter DBQ26_17735 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DBQ26_17745 PF02033 Ribosome-binding factor A DBQ26_17750 PF08364 Bacterial translation initiation factor IF-2 associated region DBQ26_17750 PF04760 Translation initiation factor IF-2, N-terminal region DBQ26_17750 PF11987 Translation-initiation factor 2 DBQ26_17750 PF00009 Elongation factor Tu GTP binding domain DBQ26_17755 PF00575 S1 RNA binding domain DBQ26_17755 PF08529 NusA N-terminal domain DBQ26_17755 PF13184 NusA-like KH domain DBQ26_17760 PF17384 RimP C-terminal SH3 domain DBQ26_17760 PF02576 RimP N-terminal domain DBQ26_17780 PF03840 Preprotein translocase SecG subunit DBQ26_17785 PF00121 Triosephosphate isomerase DBQ26_17790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DBQ26_17790 PF00437 Type II/IV secretion system protein DBQ26_17795 PF00482 Type II secretion system (T2SS), protein F DBQ26_17800 PF01478 Type IV leader peptidase family DBQ26_17800 PF06750 Bacterial Peptidase A24 N-terminal domain DBQ26_17805 PF01121 Dephospho-CoA kinase DBQ26_17815 PF08032 RNA 2'-O ribose methyltransferase substrate binding DBQ26_17815 PF00588 SpoU rRNA Methylase family DBQ26_17820 PF06865 Pyrimidine/purine nucleoside phosphorylase DBQ26_17830 PF02463 RecF/RecN/SMC N terminal domain DBQ26_17835 PF02622 Uncharacterized ACR, COG1678 DBQ26_17840 PF03652 Holliday junction resolvase DBQ26_17845 PF13533 Biotin-lipoyl like DBQ26_17875 PF12833 Helix-turn-helix domain DBQ26_17875 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DBQ26_17875 PF02805 Metal binding domain of Ada DBQ26_17875 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DBQ26_17880 PF01066 CDP-alcohol phosphatidyltransferase DBQ26_17890 PF02151 UvrB/uvrC motif DBQ26_17890 PF01541 GIY-YIG catalytic domain DBQ26_17890 PF08459 UvrC Helix-hairpin-helix N-terminal DBQ26_17925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DBQ26_17925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DBQ26_17925 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_17930 PF00108 Thiolase, N-terminal domain DBQ26_17930 PF02803 Thiolase, C-terminal domain DBQ26_17955 PF09278 MerR, DNA binding DBQ26_17955 PF00376 MerR family regulatory protein DBQ26_17980 PF00183 Hsp90 protein DBQ26_17980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_17995 PF13726 Na+-H+ antiporter family DBQ26_17995 PF03553 Na+/H+ antiporter family DBQ26_18020 PF04998 RNA polymerase Rpb1, domain 5 DBQ26_18020 PF05000 RNA polymerase Rpb1, domain 4 DBQ26_18020 PF04983 RNA polymerase Rpb1, domain 3 DBQ26_18020 PF00623 RNA polymerase Rpb1, domain 2 DBQ26_18020 PF04997 RNA polymerase Rpb1, domain 1 DBQ26_18025 PF04563 RNA polymerase beta subunit DBQ26_18025 PF04561 RNA polymerase Rpb2, domain 2 DBQ26_18025 PF00562 RNA polymerase Rpb2, domain 6 DBQ26_18025 PF04565 RNA polymerase Rpb2, domain 3 DBQ26_18025 PF10385 RNA polymerase beta subunit external 1 domain DBQ26_18025 PF04560 RNA polymerase Rpb2, domain 7 DBQ26_18030 PF16320 Ribosomal protein L7/L12 dimerisation domain DBQ26_18030 PF00542 Ribosomal protein L7/L12 C-terminal domain DBQ26_18035 PF00466 Ribosomal protein L10 DBQ26_18040 PF00687 Ribosomal protein L1p/L10e family DBQ26_18045 PF03946 Ribosomal protein L11, N-terminal domain DBQ26_18045 PF00298 Ribosomal protein L11, RNA binding domain DBQ26_18050 PF00467 KOW motif DBQ26_18050 PF02357 Transcription termination factor nusG DBQ26_18055 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DBQ26_18065 PF00009 Elongation factor Tu GTP binding domain DBQ26_18065 PF03144 Elongation factor Tu domain 2 DBQ26_18065 PF03143 Elongation factor Tu C-terminal domain DBQ26_18090 PF04715 Anthranilate synthase component I, N terminal region DBQ26_18090 PF00425 chorismate binding enzyme DBQ26_18095 PF13419 Haloacid dehalogenase-like hydrolase DBQ26_18100 PF00498 FHA domain DBQ26_18100 PF12401 Protein of unknown function (DUF2662) DBQ26_18105 PF03958 Bacterial type II/III secretion system short domain DBQ26_18105 PF00263 Bacterial type II and III secretion system protein DBQ26_18120 PF00816 H-NS histone family DBQ26_18130 PF00665 Integrase core domain DBQ26_18130 PF13936 Helix-turn-helix domain DBQ26_18155 PF03900 Porphobilinogen deaminase, C-terminal domain DBQ26_18155 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DBQ26_18160 PF04397 LytTr DNA-binding domain DBQ26_18160 PF00072 Response regulator receiver domain DBQ26_18165 PF06580 Histidine kinase DBQ26_18165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_18165 PF07694 5TMR of 5TMR-LYT DBQ26_18170 PF14698 Argininosuccinate lyase C-terminal DBQ26_18170 PF00206 Lyase DBQ26_18175 PF04362 Bacterial Fe(2+) trafficking DBQ26_18180 PF01895 PhoU domain DBQ26_18185 PF02321 Outer membrane efflux protein DBQ26_18210 PF13667 ThiC-associated domain DBQ26_18210 PF01964 Radical SAM ThiC family DBQ26_18215 PF00293 NUDIX domain DBQ26_18220 PF00149 Calcineurin-like phosphoesterase DBQ26_18225 PF01258 Prokaryotic dksA/traR C4-type zinc finger DBQ26_18230 PF00749 tRNA synthetases class I (E and Q), catalytic domain DBQ26_18235 PF01098 Cell cycle protein DBQ26_18240 PF08245 Mur ligase middle domain DBQ26_18240 PF02875 Mur ligase family, glutamate ligase domain DBQ26_18250 PF02421 Ferrous iron transport protein B DBQ26_18250 PF07670 Nucleoside recognition DBQ26_18250 PF07664 Ferrous iron transport protein B C terminus DBQ26_18260 PF00589 Phage integrase family DBQ26_18260 PF02899 Phage integrase, N-terminal SAM-like domain DBQ26_18265 PF13098 Thioredoxin-like domain DBQ26_18265 PF10411 Disulfide bond isomerase protein N-terminus DBQ26_18270 PF01842 ACT domain DBQ26_18270 PF00742 Homoserine dehydrogenase DBQ26_18270 PF03447 Homoserine dehydrogenase, NAD binding domain DBQ26_18275 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_18280 PF00768 D-alanyl-D-alanine carboxypeptidase DBQ26_18285 PF00072 Response regulator receiver domain DBQ26_18285 PF00196 Bacterial regulatory proteins, luxR family DBQ26_18290 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_18295 PF00072 Response regulator receiver domain DBQ26_18295 PF02954 Bacterial regulatory protein, Fis family DBQ26_18295 PF00158 Sigma-54 interaction domain DBQ26_18300 PF03572 Peptidase family S41 DBQ26_18300 PF00595 PDZ domain DBQ26_18305 PF01676 Metalloenzyme superfamily DBQ26_18305 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DBQ26_18310 PF03739 Lipopolysaccharide export system permease LptF/LptG DBQ26_18320 PF02789 Cytosol aminopeptidase family, N-terminal domain DBQ26_18320 PF00883 Cytosol aminopeptidase family, catalytic domain DBQ26_18340 PF00677 Lumazine binding domain DBQ26_18350 PF01872 RibD C-terminal domain DBQ26_18350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DBQ26_18355 PF03477 ATP cone domain DBQ26_18360 PF00909 Ammonium Transporter Family DBQ26_18365 PF00543 Nitrogen regulatory protein P-II DBQ26_18375 PF01078 Magnesium chelatase, subunit ChlI DBQ26_18375 PF13335 Magnesium chelatase, subunit ChlI C-terminal DBQ26_18380 PF03358 NADPH-dependent FMN reductase DBQ26_18385 PF00392 Bacterial regulatory proteins, gntR family DBQ26_18385 PF00155 Aminotransferase class I and II DBQ26_18390 PF00596 Class II Aldolase and Adducin N-terminal domain DBQ26_18395 PF00701 Dihydrodipicolinate synthetase family DBQ26_18410 PF03573 outer membrane porin, OprD family DBQ26_18415 PF00719 Inorganic pyrophosphatase DBQ26_18430 PF00501 AMP-binding enzyme DBQ26_18430 PF13193 AMP-binding enzyme C-terminal domain DBQ26_18435 PF00521 DNA gyrase/topoisomerase IV, subunit A DBQ26_18435 PF03989 DNA gyrase C-terminal domain, beta-propeller DBQ26_18440 PF07690 Major Facilitator Superfamily DBQ26_18445 PF03458 UPF0126 domain DBQ26_18450 PF02810 SEC-C motif DBQ26_18455 PF03471 Transporter associated domain DBQ26_18455 PF03741 Integral membrane protein TerC family DBQ26_18460 PF03641 Possible lysine decarboxylase DBQ26_18465 PF07690 Major Facilitator Superfamily DBQ26_18470 PF01183 Glycosyl hydrolases family 25 DBQ26_18475 PF11798 IMS family HHH motif DBQ26_18475 PF00817 impB/mucB/samB family DBQ26_18475 PF11799 impB/mucB/samB family C-terminal domain DBQ26_18490 PF04055 Radical SAM superfamily DBQ26_18490 PF08497 Radical SAM N-terminal DBQ26_18490 PF11842 Domain of unknown function (DUF3362) DBQ26_18510 PF03358 NADPH-dependent FMN reductase DBQ26_18525 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_18555 PF00440 Bacterial regulatory proteins, tetR family DBQ26_18580 PF01327 Polypeptide deformylase DBQ26_18590 PF02481 DNA recombination-mediator protein A DBQ26_18590 PF17782 DprA winged helix domain DBQ26_18595 PF01300 Telomere recombination DBQ26_18600 PF00892 EamA-like transporter family DBQ26_18605 PF00440 Bacterial regulatory proteins, tetR family DBQ26_18610 PF07690 Major Facilitator Superfamily DBQ26_18620 PF00255 Glutathione peroxidase DBQ26_18630 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DBQ26_18635 PF02874 ATP synthase alpha/beta family, beta-barrel domain DBQ26_18635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DBQ26_18640 PF00231 ATP synthase DBQ26_18645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DBQ26_18645 PF02874 ATP synthase alpha/beta family, beta-barrel domain DBQ26_18645 PF00306 ATP synthase alpha/beta chain, C terminal domain DBQ26_18650 PF00213 ATP synthase delta (OSCP) subunit DBQ26_18655 PF00430 ATP synthase B/B' CF(0) DBQ26_18660 PF00137 ATP synthase subunit C DBQ26_18665 PF00119 ATP synthase A chain DBQ26_18685 PF00005 ABC transporter DBQ26_18690 PF00950 ABC 3 transport family DBQ26_18695 PF01810 LysE type translocator DBQ26_18700 PF04261 Dyp-type peroxidase family DBQ26_18705 PF03949 Malic enzyme, NAD binding domain DBQ26_18705 PF00390 Malic enzyme, N-terminal domain DBQ26_18715 PF05746 DALR anticodon binding domain DBQ26_18715 PF03485 Arginyl tRNA synthetase N terminal domain DBQ26_18715 PF00750 tRNA synthetases class I (R) DBQ26_18735 PF00872 Transposase, Mutator family DBQ26_18745 PF02678 Pirin DBQ26_18745 PF05726 Pirin C-terminal cupin domain DBQ26_18755 PF03551 Transcriptional regulator PadR-like family DBQ26_18760 PF01909 Nucleotidyltransferase domain DBQ26_18760 PF13427 Domain of unknown function (DUF4111) DBQ26_18765 PF00958 GMP synthase C terminal domain DBQ26_18765 PF00117 Glutamine amidotransferase class-I DBQ26_18765 PF02540 NAD synthase DBQ26_18770 PF04286 Protein of unknown function (DUF445) DBQ26_18775 PF07681 DoxX DBQ26_18780 PF09335 SNARE associated Golgi protein DBQ26_18795 PF13614 AAA domain DBQ26_18805 PF01722 BolA-like protein DBQ26_18840 PF07120 Protein of unknown function (DUF1376) DBQ26_18900 PF00529 HlyD membrane-fusion protein of T1SS DBQ26_18905 PF03412 Peptidase C39 family DBQ26_18905 PF00664 ABC transporter transmembrane region DBQ26_18905 PF00005 ABC transporter DBQ26_18925 PF13359 DDE superfamily endonuclease DBQ26_18925 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_18970 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_18970 PF13359 DDE superfamily endonuclease DBQ26_18980 PF13936 Helix-turn-helix domain DBQ26_18980 PF00665 Integrase core domain DBQ26_18990 PF00765 Autoinducer synthase DBQ26_18995 PF00392 Bacterial regulatory proteins, gntR family DBQ26_18995 PF00155 Aminotransferase class I and II DBQ26_19005 PF01266 FAD dependent oxidoreductase DBQ26_19010 PF00324 Amino acid permease DBQ26_19015 PF00892 EamA-like transporter family DBQ26_19020 PF07690 Major Facilitator Superfamily DBQ26_19020 PF00083 Sugar (and other) transporter DBQ26_19025 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_19030 PF00378 Enoyl-CoA hydratase/isomerase DBQ26_19035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DBQ26_19035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DBQ26_19035 PF02770 Acyl-CoA dehydrogenase, middle domain DBQ26_19040 PF00501 AMP-binding enzyme DBQ26_19040 PF13193 AMP-binding enzyme C-terminal domain DBQ26_19045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DBQ26_19045 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DBQ26_19050 PF00171 Aldehyde dehydrogenase family DBQ26_19060 PF00324 Amino acid permease DBQ26_19065 PF00324 Amino acid permease DBQ26_19070 PF01042 Endoribonuclease L-PSP DBQ26_19075 PF01168 Alanine racemase, N-terminal domain DBQ26_19075 PF00842 Alanine racemase, C-terminal domain DBQ26_19080 PF01266 FAD dependent oxidoreductase DBQ26_19085 PF01037 Lrp/AsnC ligand binding domain DBQ26_19095 PF00593 TonB dependent receptor DBQ26_19095 PF07715 TonB-dependent Receptor Plug Domain DBQ26_19110 PF00849 RNA pseudouridylate synthase DBQ26_19190 PF02481 DNA recombination-mediator protein A DBQ26_19190 PF17782 DprA winged helix domain DBQ26_19205 PF00330 Aconitase family (aconitate hydratase) DBQ26_19205 PF00694 Aconitase C-terminal domain DBQ26_19210 PF00285 Citrate synthase, C-terminal domain DBQ26_19220 PF07729 FCD domain DBQ26_19220 PF00392 Bacterial regulatory proteins, gntR family DBQ26_19230 PF00155 Aminotransferase class I and II DBQ26_19235 PF01565 FAD binding domain DBQ26_19235 PF09330 D-lactate dehydrogenase, membrane binding DBQ26_19240 PF01070 FMN-dependent dehydrogenase DBQ26_19245 PF00392 Bacterial regulatory proteins, gntR family DBQ26_19245 PF07729 FCD domain DBQ26_19250 PF02652 L-lactate permease DBQ26_19255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DBQ26_19255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DBQ26_19255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DBQ26_19255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DBQ26_19265 PF00342 Phosphoglucose isomerase DBQ26_19270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DBQ26_19270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DBQ26_19270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DBQ26_19275 PF00483 Nucleotidyl transferase DBQ26_19280 PF02397 Bacterial sugar transferase DBQ26_19290 PF00535 Glycosyl transferase family 2 DBQ26_19305 PF02350 UDP-N-acetylglucosamine 2-epimerase DBQ26_19310 PF01943 Polysaccharide biosynthesis protein DBQ26_19315 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DBQ26_19320 PF00483 Nucleotidyl transferase DBQ26_19325 PF04321 RmlD substrate binding domain DBQ26_19330 PF16363 GDP-mannose 4,6 dehydratase DBQ26_19335 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DBQ26_19335 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DBQ26_19335 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DBQ26_19340 PF02563 Polysaccharide biosynthesis/export protein DBQ26_19340 PF10531 SLBB domain DBQ26_19340 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DBQ26_19345 PF01451 Low molecular weight phosphotyrosine protein phosphatase DBQ26_19350 PF02706 Chain length determinant protein DBQ26_19350 PF13614 AAA domain DBQ26_19350 PF13807 G-rich domain on putative tyrosine kinase DBQ26_19355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DBQ26_19355 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DBQ26_19360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DBQ26_19360 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DBQ26_19365 PF03023 Lipid II flippase MurJ DBQ26_19370 PF01510 N-acetylmuramoyl-L-alanine amidase DBQ26_19375 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DBQ26_19375 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DBQ26_19385 PF05506 Domain of unknown function (DUF756) DBQ26_19385 PF04185 Phosphoesterase family DBQ26_19395 PF01138 3' exoribonuclease family, domain 1 DBQ26_19395 PF03725 3' exoribonuclease family, domain 2 DBQ26_19400 PF00487 Fatty acid desaturase DBQ26_19405 PF00175 Oxidoreductase NAD-binding domain DBQ26_19410 PF00440 Bacterial regulatory proteins, tetR family DBQ26_19415 PF08360 QacR-like protein, C-terminal region DBQ26_19415 PF00440 Bacterial regulatory proteins, tetR family DBQ26_19420 PF01323 DSBA-like thioredoxin domain DBQ26_19430 PF13419 Haloacid dehalogenase-like hydrolase DBQ26_19435 PF00106 short chain dehydrogenase DBQ26_19450 PF00583 Acetyltransferase (GNAT) family DBQ26_19450 PF00696 Amino acid kinase family DBQ26_19455 PF09084 NMT1/THI5 like DBQ26_19460 PF09084 NMT1/THI5 like DBQ26_19465 PF00296 Luciferase-like monooxygenase DBQ26_19470 PF00528 Binding-protein-dependent transport system inner membrane component DBQ26_19475 PF00005 ABC transporter DBQ26_19480 PF00440 Bacterial regulatory proteins, tetR family DBQ26_19480 PF08362 YcdC-like protein, C-terminal region DBQ26_19485 PF01048 Phosphorylase superfamily DBQ26_19495 PF01687 Riboflavin kinase DBQ26_19495 PF06574 FAD synthetase DBQ26_19500 PF00133 tRNA synthetases class I (I, L, M and V) DBQ26_19500 PF06827 Zinc finger found in FPG and IleRS DBQ26_19500 PF08264 Anticodon-binding domain of tRNA DBQ26_19505 PF01252 Signal peptidase (SPase) II DBQ26_19510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DBQ26_19550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DBQ26_19555 PF07859 alpha/beta hydrolase fold DBQ26_19580 PF01025 GrpE DBQ26_19585 PF00012 Hsp70 protein DBQ26_19605 PF13406 Transglycosylase SLT domain DBQ26_19610 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DBQ26_19610 PF02222 ATP-grasp domain DBQ26_19615 PF00731 AIR carboxylase DBQ26_19630 PF08245 Mur ligase middle domain DBQ26_19630 PF02875 Mur ligase family, glutamate ligase domain DBQ26_19630 PF01225 Mur ligase family, catalytic domain DBQ26_19640 PF01569 PAP2 superfamily DBQ26_19645 PF03741 Integral membrane protein TerC family DBQ26_19655 PF03738 Glutathionylspermidine synthase preATP-grasp DBQ26_19660 PF00355 Rieske [2Fe-2S] domain DBQ26_19665 PF01979 Amidohydrolase family DBQ26_19670 PF00156 Phosphoribosyl transferase domain DBQ26_19680 PF10411 Disulfide bond isomerase protein N-terminus DBQ26_19680 PF13098 Thioredoxin-like domain DBQ26_19685 PF16916 Dimerisation domain of Zinc Transporter DBQ26_19685 PF01545 Cation efflux family DBQ26_19690 PF02583 Metal-sensitive transcriptional repressor DBQ26_19695 PF10396 GTP-binding protein TrmE N-terminus DBQ26_19695 PF12631 MnmE helical domain DBQ26_19695 PF01926 50S ribosome-binding GTPase DBQ26_19700 PF14849 YidC periplasmic domain DBQ26_19700 PF02096 60Kd inner membrane protein DBQ26_19705 PF01809 Putative membrane protein insertion efficiency factor DBQ26_19710 PF00825 Ribonuclease P DBQ26_19715 PF00468 Ribosomal protein L34 DBQ26_19720 PF08299 Bacterial dnaA protein helix-turn-helix DBQ26_19720 PF00308 Bacterial dnaA protein DBQ26_19720 PF11638 DnaA N-terminal domain DBQ26_19725 PF02768 DNA polymerase III beta subunit, C-terminal domain DBQ26_19725 PF02767 DNA polymerase III beta subunit, central domain DBQ26_19725 PF00712 DNA polymerase III beta subunit, N-terminal domain DBQ26_19730 PF02463 RecF/RecN/SMC N terminal domain DBQ26_19735 PF00204 DNA gyrase B DBQ26_19735 PF00986 DNA gyrase B subunit, carboxyl terminus DBQ26_19735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_19735 PF01751 Toprim domain DBQ26_19735 PF18053 DNA gyrase B subunit insert domain DBQ26_19750 PF12848 ABC transporter DBQ26_19750 PF00005 ABC transporter DBQ26_19770 PF01521 Iron-sulphur cluster biosynthesis DBQ26_19775 PF00561 alpha/beta hydrolase fold DBQ26_19780 PF03702 Anhydro-N-acetylmuramic acid kinase DBQ26_19785 PF00579 tRNA synthetases class I (W and Y) DBQ26_19820 PF02798 Glutathione S-transferase, N-terminal domain DBQ26_19830 PF00209 Sodium:neurotransmitter symporter family DBQ26_19840 PF01029 NusB family DBQ26_19840 PF01189 16S rRNA methyltransferase RsmB/F DBQ26_19845 PF00551 Formyl transferase DBQ26_19845 PF02911 Formyl transferase, C-terminal domain DBQ26_19850 PF00920 Dehydratase family DBQ26_19865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_19865 PF03466 LysR substrate binding domain DBQ26_19870 PF00860 Permease family DBQ26_19875 PF00311 Phosphoenolpyruvate carboxylase DBQ26_19880 PF00440 Bacterial regulatory proteins, tetR family DBQ26_19880 PF08361 MAATS-type transcriptional repressor, C-terminal region DBQ26_19885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DBQ26_19890 PF00873 AcrB/AcrD/AcrF family DBQ26_19900 PF00226 DnaJ domain DBQ26_19900 PF00684 DnaJ central domain DBQ26_19900 PF01556 DnaJ C terminal domain DBQ26_19910 PF01113 Dihydrodipicolinate reductase, N-terminus DBQ26_19910 PF05173 Dihydrodipicolinate reductase, C-terminus DBQ26_19920 PF07690 Major Facilitator Superfamily DBQ26_19925 PF00248 Aldo/keto reductase family DBQ26_19930 PF03466 LysR substrate binding domain DBQ26_19930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_19945 PF00155 Aminotransferase class I and II DBQ26_19945 PF00392 Bacterial regulatory proteins, gntR family DBQ26_19950 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_19950 PF00107 Zinc-binding dehydrogenase DBQ26_19955 PF03352 Methyladenine glycosylase DBQ26_19970 PF14815 NUDIX domain DBQ26_19970 PF00633 Helix-hairpin-helix motif DBQ26_19970 PF00730 HhH-GPD superfamily base excision DNA repair protein DBQ26_19970 PF10576 Iron-sulfur binding domain of endonuclease III DBQ26_19985 PF07043 Protein of unknown function (DUF1328) DBQ26_19990 PF03692 Putative zinc- or iron-chelating domain DBQ26_19995 PF07995 Glucose / Sorbosone dehydrogenase DBQ26_20000 PF12002 MgsA AAA+ ATPase C terminal DBQ26_20000 PF00004 ATPase family associated with various cellular activities (AAA) DBQ26_20000 PF16193 AAA C-terminal domain DBQ26_20005 PF01226 Formate/nitrite transporter DBQ26_20015 PF01259 SAICAR synthetase DBQ26_20025 PF00701 Dihydrodipicolinate synthetase family DBQ26_20030 PF00857 Isochorismatase family DBQ26_20035 PF01758 Sodium Bile acid symporter family DBQ26_20040 PF01554 MatE DBQ26_20045 PF04463 Protein of unknown function (DUF523) DBQ26_20050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DBQ26_20060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DBQ26_20065 PF14497 Glutathione S-transferase, C-terminal domain DBQ26_20065 PF02798 Glutathione S-transferase, N-terminal domain DBQ26_20075 PF00324 Amino acid permease DBQ26_20085 PF07683 Cobalamin synthesis protein cobW C-terminal domain DBQ26_20085 PF02492 CobW/HypB/UreG, nucleotide-binding domain DBQ26_20095 PF07702 UTRA domain DBQ26_20095 PF00392 Bacterial regulatory proteins, gntR family DBQ26_20105 PF17391 Urocanase N-terminal domain DBQ26_20105 PF17392 Urocanase C-terminal domain DBQ26_20105 PF01175 Urocanase Rossmann-like domain DBQ26_20110 PF00221 Aromatic amino acid lyase DBQ26_20115 PF00324 Amino acid permease DBQ26_20120 PF01979 Amidohydrolase family DBQ26_20125 PF00491 Arginase family DBQ26_20145 PF16861 Carbamoyltransferase C-terminus DBQ26_20145 PF02543 Carbamoyltransferase N-terminus DBQ26_20175 PF03412 Peptidase C39 family DBQ26_20175 PF00005 ABC transporter DBQ26_20175 PF00664 ABC transporter transmembrane region DBQ26_20190 PF13419 Haloacid dehalogenase-like hydrolase DBQ26_20195 PF01177 Asp/Glu/Hydantoin racemase DBQ26_20210 PF01380 SIS domain DBQ26_20215 PF00132 Bacterial transferase hexapeptide (six repeats) DBQ26_20215 PF12804 MobA-like NTP transferase domain DBQ26_20215 PF14602 Hexapeptide repeat of succinyl-transferase DBQ26_20220 PF04608 Phosphatidylglycerophosphatase A DBQ26_20225 PF00586 AIR synthase related protein, N-terminal domain DBQ26_20225 PF02769 AIR synthase related protein, C-terminal domain DBQ26_20230 PF01029 NusB family DBQ26_20235 PF00885 6,7-dimethyl-8-ribityllumazine synthase DBQ26_20240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DBQ26_20240 PF00925 GTP cyclohydrolase II DBQ26_20270 PF02580 D-Tyr-tRNA(Tyr) deacylase DBQ26_20275 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DBQ26_20275 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DBQ26_20280 PF00581 Rhodanese-like domain DBQ26_20285 PF02666 Phosphatidylserine decarboxylase DBQ26_20290 PF03069 Acetamidase/Formamidase family DBQ26_20305 PF13936 Helix-turn-helix domain DBQ26_20305 PF00665 Integrase core domain DBQ26_20320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_20320 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_20320 PF00989 PAS fold DBQ26_20320 PF11808 Phosphate regulon sensor protein PhoR DBQ26_20325 PF00486 Transcriptional regulatory protein, C terminal DBQ26_20325 PF00072 Response regulator receiver domain DBQ26_20335 PF00106 short chain dehydrogenase DBQ26_20340 PF01554 MatE DBQ26_20345 PF00155 Aminotransferase class I and II DBQ26_20350 PF04286 Protein of unknown function (DUF445) DBQ26_20365 PF04262 Glutamate-cysteine ligase DBQ26_20370 PF02600 Disulfide bond formation protein DsbB DBQ26_20380 PF13936 Helix-turn-helix domain DBQ26_20380 PF00665 Integrase core domain DBQ26_20395 PF13359 DDE superfamily endonuclease DBQ26_20395 PF13613 Helix-turn-helix of DDE superfamily endonuclease DBQ26_20430 PF05728 Uncharacterised protein family (UPF0227) DBQ26_20435 PF01751 Toprim domain DBQ26_20435 PF00204 DNA gyrase B DBQ26_20435 PF00986 DNA gyrase B subunit, carboxyl terminus DBQ26_20435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_20440 PF04115 Ureidoglycolate lyase DBQ26_20445 PF03561 Allantoicase repeat DBQ26_20450 PF01494 FAD binding domain DBQ26_20460 PF00860 Permease family DBQ26_20465 PF00576 HIUase/Transthyretin family DBQ26_20495 PF02683 Cytochrome C biogenesis protein transmembrane region DBQ26_20495 PF11412 Disulphide bond corrector protein DsbC DBQ26_20500 PF07694 5TMR of 5TMR-LYT DBQ26_20500 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_20505 PF07859 alpha/beta hydrolase fold DBQ26_20515 PF03960 ArsC family DBQ26_20520 PF03372 Endonuclease/Exonuclease/phosphatase family DBQ26_20525 PF00156 Phosphoribosyl transferase domain DBQ26_20540 PF00593 TonB dependent receptor DBQ26_20540 PF07715 TonB-dependent Receptor Plug Domain DBQ26_20550 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DBQ26_20550 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DBQ26_20555 PF03033 Glycosyltransferase family 28 N-terminal domain DBQ26_20555 PF04101 Glycosyltransferase family 28 C-terminal domain DBQ26_20560 PF01225 Mur ligase family, catalytic domain DBQ26_20560 PF02875 Mur ligase family, glutamate ligase domain DBQ26_20560 PF08245 Mur ligase middle domain DBQ26_20565 PF07478 D-ala D-ala ligase C-terminus DBQ26_20565 PF01820 D-ala D-ala ligase N-terminus DBQ26_20570 PF08478 POTRA domain, FtsQ-type DBQ26_20570 PF03799 Cell division protein FtsQ DBQ26_20575 PF02491 SHS2 domain inserted in FTSA DBQ26_20580 PF12327 FtsZ family, C-terminal domain DBQ26_20580 PF00091 Tubulin/FtsZ family, GTPase domain DBQ26_20585 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DBQ26_20595 PF01551 Peptidase family M23 DBQ26_20600 PF17831 Pyruvate dehydrogenase E1 component middle domain DBQ26_20600 PF00456 Transketolase, thiamine diphosphate binding domain DBQ26_20605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DBQ26_20605 PF02817 e3 binding domain DBQ26_20605 PF00364 Biotin-requiring enzyme DBQ26_20615 PF01169 Uncharacterized protein family UPF0016 DBQ26_20620 PF07715 TonB-dependent Receptor Plug Domain DBQ26_20620 PF00593 TonB dependent receptor DBQ26_20625 PF01613 Flavin reductase like domain DBQ26_20625 PF00258 Flavodoxin DBQ26_20630 PF00478 IMP dehydrogenase / GMP reductase domain DBQ26_20630 PF00571 CBS domain DBQ26_20635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DBQ26_20635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DBQ26_20635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DBQ26_20635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DBQ26_20640 PF01243 Pyridoxamine 5'-phosphate oxidase DBQ26_20640 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DBQ26_20645 PF17768 RecJ OB domain DBQ26_20645 PF01368 DHH family DBQ26_20645 PF02272 DHHA1 domain DBQ26_20665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DBQ26_20670 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DBQ26_20675 PF04452 RNA methyltransferase DBQ26_20680 PF05552 Conserved TM helix DBQ26_20680 PF00924 Mechanosensitive ion channel DBQ26_20690 PF13193 AMP-binding enzyme C-terminal domain DBQ26_20690 PF00501 AMP-binding enzyme DBQ26_20690 PF16177 Acetyl-coenzyme A synthetase N-terminus DBQ26_20695 PF00857 Isochorismatase family DBQ26_20700 PF01037 Lrp/AsnC ligand binding domain DBQ26_20705 PF00296 Luciferase-like monooxygenase DBQ26_20710 PF03358 NADPH-dependent FMN reductase DBQ26_20715 PF00072 Response regulator receiver domain DBQ26_20715 PF00196 Bacterial regulatory proteins, luxR family DBQ26_20725 PF00672 HAMP domain DBQ26_20725 PF00512 His Kinase A (phospho-acceptor) domain DBQ26_20725 PF01627 Hpt domain DBQ26_20725 PF00072 Response regulator receiver domain DBQ26_20725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DBQ26_20730 PF04341 Protein of unknown function, DUF485 DBQ26_20735 PF00474 Sodium:solute symporter family DBQ26_20745 PF02028 BCCT, betaine/carnitine/choline family transporter DBQ26_20755 PF17158 Membrane-associated sensor, integral membrane domain DBQ26_20755 PF00990 Diguanylate cyclase, GGDEF domain DBQ26_20760 PF17755 UvrA DNA-binding domain DBQ26_20760 PF17760 UvrA interaction domain DBQ26_20765 PF00440 Bacterial regulatory proteins, tetR family DBQ26_20765 PF16925 Tetracyclin repressor-like, C-terminal domain DBQ26_20770 PF16197 Ketoacyl-synthetase C-terminal extension DBQ26_20770 PF00107 Zinc-binding dehydrogenase DBQ26_20770 PF08240 Alcohol dehydrogenase GroES-like domain DBQ26_20770 PF02801 Beta-ketoacyl synthase, C-terminal domain DBQ26_20770 PF00698 Acyl transferase domain DBQ26_20770 PF14765 Polyketide synthase dehydratase DBQ26_20770 PF00109 Beta-ketoacyl synthase, N-terminal domain DBQ26_20770 PF00550 Phosphopantetheine attachment site DBQ26_20770 PF08659 KR domain DBQ26_20780 PF06942 GlpM protein DBQ26_20785 PF00106 short chain dehydrogenase DBQ26_20790 PF00376 MerR family regulatory protein DBQ26_20790 PF09278 MerR, DNA binding DBQ26_20795 PF02581 Thiamine monophosphate synthase DBQ26_20795 PF03070 TENA/THI-4/PQQC family DBQ26_20795 PF08543 Phosphomethylpyrimidine kinase DBQ26_20805 PF07690 Major Facilitator Superfamily DBQ26_20810 PF00436 Single-strand binding protein family DBQ26_20845 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DBQ26_20845 PF00271 Helicase conserved C-terminal domain DBQ26_20845 PF04851 Type III restriction enzyme, res subunit DBQ26_20845 PF08463 EcoEI R protein C-terminal DBQ26_20860 PF00239 Resolvase, N terminal domain DBQ26_20860 PF02796 Helix-turn-helix domain of resolvase DBQ26_20870 PF03591 AzlC protein DBQ26_20880 PF00324 Amino acid permease DBQ26_20885 PF00392 Bacterial regulatory proteins, gntR family DBQ26_20885 PF00155 Aminotransferase class I and II DBQ26_20890 PF00202 Aminotransferase class-III DBQ26_20895 PF00171 Aldehyde dehydrogenase family DBQ26_20900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_20905 PF00857 Isochorismatase family DBQ26_20910 PF02678 Pirin DBQ26_20910 PF05726 Pirin C-terminal cupin domain DBQ26_20915 PF01593 Flavin containing amine oxidoreductase DBQ26_20935 PF07690 Major Facilitator Superfamily DBQ26_20940 PF03466 LysR substrate binding domain DBQ26_20940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DBQ26_20965 PF00248 Aldo/keto reductase family DBQ26_20970 PF12833 Helix-turn-helix domain DBQ26_20970 PF02311 AraC-like ligand binding domain DBQ26_20985 PF00440 Bacterial regulatory proteins, tetR family DBQ26_20990 PF00291 Pyridoxal-phosphate dependent enzyme DBQ26_21010 PF01638 HxlR-like helix-turn-helix DBQ26_21020 PF02525 Flavodoxin-like fold DBQ26_21025 PF13193 AMP-binding enzyme C-terminal domain DBQ26_21025 PF00501 AMP-binding enzyme DBQ26_21030 PF13737 Transposase DDE domain DBQ26_21045 PF12833 Helix-turn-helix domain