locus-tag class description BVD86_00005 PF00308 Bacterial dnaA protein BVD86_00005 PF08299 Bacterial dnaA protein helix-turn-helix BVD86_00005 PF11638 DnaA N-terminal domain BVD86_00040 PF08032 RNA 2'-O ribose methyltransferase substrate binding BVD86_00040 PF00588 SpoU rRNA Methylase family BVD86_00045 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BVD86_00055 PF00691 OmpA family BVD86_00060 PF04052 TolB amino-terminal domain BVD86_00060 PF07676 WD40-like Beta Propeller Repeat BVD86_00070 PF02472 Biopolymer transport protein ExbD/TolR BVD86_00075 PF01618 MotA/TolQ/ExbB proton channel family BVD86_00080 PF03061 Thioesterase superfamily BVD86_00085 PF07687 Peptidase dimerisation domain BVD86_00085 PF01546 Peptidase family M20/M25/M40 BVD86_00090 PF05491 RuvB C-terminal winged helix domain BVD86_00090 PF05496 Holliday junction DNA helicase RuvB P-loop domain BVD86_00090 PF17864 RuvB AAA lid domain BVD86_00095 PF07499 RuvA, C-terminal domain BVD86_00095 PF01330 RuvA N terminal domain BVD86_00100 PF01966 HD domain BVD86_00105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BVD86_00105 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BVD86_00105 PF02769 AIR synthase related protein, C-terminal domain BVD86_00110 PF07690 Major Facilitator Superfamily BVD86_00115 PF01784 NIF3 (NGG1p interacting factor 3) BVD86_00120 PF00378 Enoyl-CoA hydratase/isomerase BVD86_00125 PF00293 NUDIX domain BVD86_00125 PF01467 Cytidylyltransferase-like BVD86_00140 PF00578 AhpC/TSA family BVD86_00155 PF06508 Queuosine biosynthesis protein QueC BVD86_00165 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_00165 PF14602 Hexapeptide repeat of succinyl-transferase BVD86_00165 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BVD86_00175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_00175 PF03466 LysR substrate binding domain BVD86_00180 PF12857 TOBE-like domain BVD86_00180 PF00005 ABC transporter BVD86_00185 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_00190 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_00205 PF01063 Amino-transferase class IV BVD86_00210 PF02618 YceG-like family BVD86_00215 PF02223 Thymidylate kinase BVD86_00225 PF00890 FAD binding domain BVD86_00225 PF02910 Fumarate reductase flavoprotein C-term BVD86_00230 PF13180 PDZ domain BVD86_00240 PF13302 Acetyltransferase (GNAT) domain BVD86_00245 PF00679 Elongation factor G C-terminus BVD86_00245 PF00009 Elongation factor Tu GTP binding domain BVD86_00245 PF03144 Elongation factor Tu domain 2 BVD86_00245 PF06421 GTP-binding protein LepA C-terminus BVD86_00250 PF10502 Signal peptidase, peptidase S26 BVD86_00260 PF00035 Double-stranded RNA binding motif BVD86_00260 PF14622 Ribonuclease-III-like BVD86_00265 PF01926 50S ribosome-binding GTPase BVD86_00265 PF07650 KH domain BVD86_00275 PF02565 Recombination protein O C terminal BVD86_00275 PF11967 Recombination protein O N terminal BVD86_00280 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BVD86_00285 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BVD86_00290 PF00106 short chain dehydrogenase BVD86_00315 PF00892 EamA-like transporter family BVD86_00330 PF17151 Periplasmic sensor domain BVD86_00330 PF00990 Diguanylate cyclase, GGDEF domain BVD86_00340 PF00271 Helicase conserved C-terminal domain BVD86_00340 PF04851 Type III restriction enzyme, res subunit BVD86_00340 PF12344 Ultra-violet resistance protein B BVD86_00340 PF02151 UvrB/uvrC motif BVD86_00340 PF17757 UvrB interaction domain BVD86_00350 PF00892 EamA-like transporter family BVD86_00355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BVD86_00355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BVD86_00370 PF01018 GTP1/OBG BVD86_00370 PF01926 50S ribosome-binding GTPase BVD86_00375 PF01472 PUA domain BVD86_00375 PF00696 Amino acid kinase family BVD86_00385 PF07759 Protein of unknown function (DUF1615) BVD86_00390 PF01207 Dihydrouridine synthase (Dus) BVD86_00395 PF03060 Nitronate monooxygenase BVD86_00435 PF03441 FAD binding domain of DNA photolyase BVD86_00435 PF00875 DNA photolyase BVD86_00440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BVD86_00445 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_00450 PF00768 D-alanyl-D-alanine carboxypeptidase BVD86_00450 PF07943 Penicillin-binding protein 5, C-terminal domain BVD86_00460 PF03971 Monomeric isocitrate dehydrogenase BVD86_00465 PF00849 RNA pseudouridylate synthase BVD86_00470 PF00180 Isocitrate/isopropylmalate dehydrogenase BVD86_00480 PF06779 Uncharacterised MFS-type transporter YbfB BVD86_00485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_00485 PF03466 LysR substrate binding domain BVD86_00495 PF02567 Phenazine biosynthesis-like protein BVD86_00500 PF05193 Peptidase M16 inactive domain BVD86_00500 PF00675 Insulinase (Peptidase family M16) BVD86_00525 PF02581 Thiamine monophosphate synthase BVD86_00530 PF00202 Aminotransferase class-III BVD86_00540 PF00849 RNA pseudouridylate synthase BVD86_00545 PF18337 RapA N-terminal Tudor like domain BVD86_00545 PF00271 Helicase conserved C-terminal domain BVD86_00545 PF12137 RNA polymerase recycling family C-terminal BVD86_00545 PF18339 RapA N-terminal Tudor like domain 1 BVD86_00545 PF00176 SNF2 family N-terminal domain BVD86_00555 PF00440 Bacterial regulatory proteins, tetR family BVD86_00560 PF00175 Oxidoreductase NAD-binding domain BVD86_00560 PF00111 2Fe-2S iron-sulfur cluster binding domain BVD86_00560 PF00970 Oxidoreductase FAD-binding domain BVD86_00565 PF00487 Fatty acid desaturase BVD86_00575 PF00202 Aminotransferase class-III BVD86_00580 PF00282 Pyridoxal-dependent decarboxylase conserved domain BVD86_00585 PF00171 Aldehyde dehydrogenase family BVD86_00590 PF01037 Lrp/AsnC ligand binding domain BVD86_00595 PF00205 Thiamine pyrophosphate enzyme, central domain BVD86_00595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BVD86_00595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BVD86_00600 PF00324 Amino acid permease BVD86_00605 PF12849 PBP superfamily domain BVD86_00610 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_00615 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_00620 PF00005 ABC transporter BVD86_00625 PF08496 Peptidase family S49 N-terminal BVD86_00625 PF01343 Peptidase family S49 BVD86_00640 PF00206 Lyase BVD86_00640 PF08328 Adenylosuccinate lyase C-terminal BVD86_00645 PF04356 Protein of unknown function (DUF489) BVD86_00655 PF13344 Haloacid dehalogenase-like hydrolase BVD86_00655 PF00293 NUDIX domain BVD86_00660 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_00665 PF00768 D-alanyl-D-alanine carboxypeptidase BVD86_00665 PF07943 Penicillin-binding protein 5, C-terminal domain BVD86_00680 PF01975 Survival protein SurE BVD86_00685 PF01551 Peptidase family M23 BVD86_00685 PF01476 LysM domain BVD86_00690 PF03466 LysR substrate binding domain BVD86_00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_00695 PF13654 AAA domain BVD86_00695 PF05362 Lon protease (S16) C-terminal proteolytic domain BVD86_00700 PF07690 Major Facilitator Superfamily BVD86_00705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BVD86_00710 PF13593 SBF-like CPA transporter family (DUF4137) BVD86_00715 PF01197 Ribosomal protein L31 BVD86_00730 PF04055 Radical SAM superfamily BVD86_00735 PF08207 Elongation factor P (EF-P) KOW-like domain BVD86_00735 PF09285 Elongation factor P, C-terminal BVD86_00735 PF01132 Elongation factor P (EF-P) OB domain BVD86_00740 PF02554 Carbon starvation protein CstA BVD86_00740 PF13722 5TM C-terminal transporter carbon starvation CstA BVD86_00745 PF04328 Selenoprotein, putative BVD86_00755 PF13356 Arm DNA-binding domain BVD86_00755 PF00589 Phage integrase family BVD86_00785 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BVD86_00800 PF02796 Helix-turn-helix domain of resolvase BVD86_00800 PF00239 Resolvase, N terminal domain BVD86_00870 PF02423 Ornithine cyclodeaminase/mu-crystallin family BVD86_00875 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_00880 PF08348 YheO-like PAS domain BVD86_00880 PF13309 HTH domain BVD86_00890 PF02678 Pirin BVD86_00890 PF17954 Quercetinase C-terminal cupin domain BVD86_00900 PF00501 AMP-binding enzyme BVD86_00900 PF13193 AMP-binding enzyme C-terminal domain BVD86_00900 PF00668 Condensation domain BVD86_00900 PF00550 Phosphopantetheine attachment site BVD86_00905 PF00975 Thioesterase domain BVD86_00905 PF00501 AMP-binding enzyme BVD86_00905 PF13193 AMP-binding enzyme C-terminal domain BVD86_00905 PF00668 Condensation domain BVD86_00905 PF00550 Phosphopantetheine attachment site BVD86_00910 PF01032 FecCD transport family BVD86_00915 PF01032 FecCD transport family BVD86_00920 PF00005 ABC transporter BVD86_00925 PF01497 Periplasmic binding protein BVD86_00930 PF07715 TonB-dependent Receptor Plug Domain BVD86_00930 PF00593 TonB dependent receptor BVD86_00935 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BVD86_00940 PF00550 Phosphopantetheine attachment site BVD86_00940 PF00668 Condensation domain BVD86_00940 PF00501 AMP-binding enzyme BVD86_00945 PF13193 AMP-binding enzyme C-terminal domain BVD86_00945 PF00501 AMP-binding enzyme BVD86_00950 PF00857 Isochorismatase family BVD86_00950 PF00550 Phosphopantetheine attachment site BVD86_00965 PF00664 ABC transporter transmembrane region BVD86_00965 PF00005 ABC transporter BVD86_00970 PF00005 ABC transporter BVD86_00970 PF00664 ABC transporter transmembrane region BVD86_00975 PF00975 Thioesterase domain BVD86_00985 PF00425 chorismate binding enzyme BVD86_01000 PF01208 Uroporphyrinogen decarboxylase (URO-D) BVD86_01005 PF05675 Protein of unknown function (DUF817) BVD86_01020 PF00144 Beta-lactamase BVD86_01025 PF01227 GTP cyclohydrolase I BVD86_01030 PF01799 [2Fe-2S] binding domain BVD86_01030 PF00111 2Fe-2S iron-sulfur cluster binding domain BVD86_01035 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BVD86_01035 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BVD86_01045 PF01713 Smr domain BVD86_01050 PF00218 Indole-3-glycerol phosphate synthase BVD86_01055 PF02885 Glycosyl transferase family, helical bundle domain BVD86_01055 PF00591 Glycosyl transferase family, a/b domain BVD86_01060 PF00117 Glutamine amidotransferase class-I BVD86_01070 PF00854 POT family BVD86_01080 PF04345 Chorismate lyase BVD86_01085 PF01040 UbiA prenyltransferase family BVD86_01120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BVD86_01120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BVD86_01125 PF01784 NIF3 (NGG1p interacting factor 3) BVD86_01130 PF13180 PDZ domain BVD86_01135 PF01743 Poly A polymerase head domain BVD86_01135 PF12627 Probable RNA and SrmB- binding site of polymerase A BVD86_01140 PF03949 Malic enzyme, NAD binding domain BVD86_01140 PF00390 Malic enzyme, N-terminal domain BVD86_01140 PF01515 Phosphate acetyl/butaryl transferase BVD86_01145 PF03707 Bacterial signalling protein N terminal repeat BVD86_01145 PF00990 Diguanylate cyclase, GGDEF domain BVD86_01145 PF00563 EAL domain BVD86_01150 PF04452 RNA methyltransferase BVD86_01155 PF02219 Methylenetetrahydrofolate reductase BVD86_01160 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BVD86_01160 PF05221 S-adenosyl-L-homocysteine hydrolase BVD86_01175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_01175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_01175 PF09317 Domain of unknown function (DUF1974) BVD86_01180 PF04055 Radical SAM superfamily BVD86_01185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BVD86_01185 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_01195 PF07690 Major Facilitator Superfamily BVD86_01205 PF00557 Metallopeptidase family M24 BVD86_01210 PF00318 Ribosomal protein S2 BVD86_01215 PF00889 Elongation factor TS BVD86_01225 PF12833 Helix-turn-helix domain BVD86_01245 PF03330 Lytic transglycolase BVD86_01245 PF05036 Sporulation related domain BVD86_01250 PF13406 Transglycosylase SLT domain BVD86_01255 PF01098 Cell cycle protein BVD86_01265 PF14489 QueF-like protein BVD86_01265 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BVD86_01270 PF01061 ABC-2 type transporter BVD86_01275 PF00005 ABC transporter BVD86_01305 PF00464 Serine hydroxymethyltransferase BVD86_01310 PF02321 Outer membrane efflux protein BVD86_01315 PF00873 AcrB/AcrD/AcrF family BVD86_01320 PF13533 Biotin-lipoyl like BVD86_01325 PF03466 LysR substrate binding domain BVD86_01325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_01330 PF00497 Bacterial extracellular solute-binding proteins, family 3 BVD86_01335 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_01340 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_01345 PF00005 ABC transporter BVD86_01350 PF00893 Small Multidrug Resistance protein BVD86_01355 PF00037 4Fe-4S binding domain BVD86_01365 PF00155 Aminotransferase class I and II BVD86_01365 PF00392 Bacterial regulatory proteins, gntR family BVD86_01370 PF02567 Phenazine biosynthesis-like protein BVD86_01375 PF00175 Oxidoreductase NAD-binding domain BVD86_01375 PF00970 Oxidoreductase FAD-binding domain BVD86_01380 PF01980 tRNA-methyltransferase O BVD86_01380 PF18389 TrmO C-terminal domain BVD86_01390 PF00437 Type II/IV secretion system protein BVD86_01400 PF00486 Transcriptional regulatory protein, C terminal BVD86_01400 PF00072 Response regulator receiver domain BVD86_01405 PF00512 His Kinase A (phospho-acceptor) domain BVD86_01405 PF08521 Two-component sensor kinase N-terminal BVD86_01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_01415 PF00293 NUDIX domain BVD86_01425 PF00905 Penicillin binding protein transpeptidase domain BVD86_01425 PF14814 Bifunctional transglycosylase second domain BVD86_01425 PF00912 Transglycosylase BVD86_01430 PF01513 ATP-NAD kinase BVD86_01435 PF07023 Protein of unknown function (DUF1315) BVD86_01440 PF00591 Glycosyl transferase family, a/b domain BVD86_01440 PF02885 Glycosyl transferase family, helical bundle domain BVD86_01450 PF00375 Sodium:dicarboxylate symporter family BVD86_01455 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_01455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_01455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_01465 PF01842 ACT domain BVD86_01465 PF00800 Prephenate dehydratase BVD86_01465 PF01817 Chorismate mutase type II BVD86_01470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BVD86_01480 PF07687 Peptidase dimerisation domain BVD86_01480 PF01546 Peptidase family M20/M25/M40 BVD86_01485 PF00753 Metallo-beta-lactamase superfamily BVD86_01495 PF03883 Peroxide stress protein YaaA BVD86_01505 PF05690 Thiazole biosynthesis protein ThiG BVD86_01515 PF04241 Protein of unknown function (DUF423) BVD86_01520 PF00140 Sigma-70 factor, region 1.2 BVD86_01520 PF04542 Sigma-70 region 2 BVD86_01520 PF04545 Sigma-70, region 4 BVD86_01530 PF00313 'Cold-shock' DNA-binding domain BVD86_01535 PF00270 DEAD/DEAH box helicase BVD86_01535 PF00271 Helicase conserved C-terminal domain BVD86_01545 PF00881 Nitroreductase family BVD86_01550 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BVD86_01550 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BVD86_01570 PF01180 Dihydroorotate dehydrogenase BVD86_01575 PF02674 Colicin V production protein BVD86_01580 PF00156 Phosphoribosyl transferase domain BVD86_01595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BVD86_01595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BVD86_01600 PF01435 Peptidase family M48 BVD86_01605 PF09424 Yqey-like protein BVD86_01610 PF01165 Ribosomal protein S21 BVD86_01615 PF00814 Glycoprotease family BVD86_01635 PF03793 PASTA domain BVD86_01635 PF00069 Protein kinase domain BVD86_01660 PF00313 'Cold-shock' DNA-binding domain BVD86_01675 PF00561 alpha/beta hydrolase fold BVD86_01680 PF03616 Sodium/glutamate symporter BVD86_01685 PF00999 Sodium/hydrogen exchanger family BVD86_01685 PF02254 TrkA-N domain BVD86_01705 PF00155 Aminotransferase class I and II BVD86_01710 PF02080 TrkA-C domain BVD86_01710 PF06826 Predicted Permease Membrane Region BVD86_01720 PF04403 Paraquat-inducible protein A BVD86_01725 PF02470 MlaD protein BVD86_01735 PF00576 HIUase/Transthyretin family BVD86_01745 PF00486 Transcriptional regulatory protein, C terminal BVD86_01745 PF00072 Response regulator receiver domain BVD86_01750 PF00512 His Kinase A (phospho-acceptor) domain BVD86_01750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_01750 PF00672 HAMP domain BVD86_01790 PF00512 His Kinase A (phospho-acceptor) domain BVD86_01790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_01790 PF08521 Two-component sensor kinase N-terminal BVD86_01795 PF00072 Response regulator receiver domain BVD86_01795 PF00486 Transcriptional regulatory protein, C terminal BVD86_01810 PF01177 Asp/Glu/Hydantoin racemase BVD86_01815 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_01815 PF00107 Zinc-binding dehydrogenase BVD86_01820 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BVD86_01825 PF05853 beta-keto acid cleavage enzyme BVD86_01830 PF07690 Major Facilitator Superfamily BVD86_01845 PF03601 Conserved hypothetical protein 698 BVD86_01870 PF07995 Glucose / Sorbosone dehydrogenase BVD86_01890 PF00375 Sodium:dicarboxylate symporter family BVD86_01900 PF00753 Metallo-beta-lactamase superfamily BVD86_01900 PF16123 Hydroxyacylglutathione hydrolase C-terminus BVD86_01905 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_01910 PF09383 NIL domain BVD86_01910 PF00005 ABC transporter BVD86_01915 PF03180 NLPA lipoprotein BVD86_01920 PF02844 Phosphoribosylglycinamide synthetase, N domain BVD86_01920 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BVD86_01920 PF02843 Phosphoribosylglycinamide synthetase, C domain BVD86_01925 PF01808 AICARFT/IMPCHase bienzyme BVD86_01925 PF02142 MGS-like domain BVD86_01930 PF02954 Bacterial regulatory protein, Fis family BVD86_01950 PF13932 GidA associated domain BVD86_01950 PF01134 Glucose inhibited division protein A BVD86_01960 PF14403 Circularly permuted ATP-grasp type 2 BVD86_01970 PF08379 Bacterial transglutaminase-like N-terminal region BVD86_01970 PF01841 Transglutaminase-like superfamily BVD86_01980 PF00842 Alanine racemase, C-terminal domain BVD86_01980 PF01168 Alanine racemase, N-terminal domain BVD86_01985 PF00772 DnaB-like helicase N terminal domain BVD86_01985 PF03796 DnaB-like helicase C terminal domain BVD86_01990 PF03948 Ribosomal protein L9, C-terminal domain BVD86_01990 PF01281 Ribosomal protein L9, N-terminal domain BVD86_01995 PF01084 Ribosomal protein S18 BVD86_02000 PF01250 Ribosomal protein S6 BVD86_02005 PF01040 UbiA prenyltransferase family BVD86_02010 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BVD86_02015 PF00510 Cytochrome c oxidase subunit III BVD86_02020 PF00115 Cytochrome C and Quinol oxidase polypeptide I BVD86_02025 PF06481 COX Aromatic Rich Motif BVD86_02025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BVD86_02035 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BVD86_02035 PF00391 PEP-utilising enzyme, mobile domain BVD86_02035 PF02896 PEP-utilising enzyme, TIM barrel domain BVD86_02040 PF03618 Kinase/pyrophosphorylase BVD86_02050 PF14883 Hypothetical glycosyl hydrolase family 13 BVD86_02050 PF01522 Polysaccharide deacetylase BVD86_02055 PF00535 Glycosyl transferase family 2 BVD86_02060 PF13994 PgaD-like protein BVD86_02070 PF00296 Luciferase-like monooxygenase BVD86_02085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_02085 PF03466 LysR substrate binding domain BVD86_02095 PF03462 PCRF domain BVD86_02095 PF00472 RF-1 domain BVD86_02100 PF17827 PrmC N-terminal domain BVD86_02100 PF13847 Methyltransferase domain BVD86_02105 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_02110 PF09084 NMT1/THI5 like BVD86_02120 PF00106 short chain dehydrogenase BVD86_02125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_02125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_02125 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_02130 PF01613 Flavin reductase like domain BVD86_02135 PF00899 ThiF family BVD86_02140 PF03109 ABC1 family BVD86_02145 PF02152 Dihydroneopterin aldolase BVD86_02155 PF03814 Potassium-transporting ATPase A subunit BVD86_02165 PF02669 K+-transporting ATPase, c chain BVD86_02170 PF13493 Domain of unknown function (DUF4118) BVD86_02170 PF02702 Osmosensitive K+ channel His kinase sensor domain BVD86_02170 PF00512 His Kinase A (phospho-acceptor) domain BVD86_02170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_02175 PF00486 Transcriptional regulatory protein, C terminal BVD86_02175 PF00072 Response regulator receiver domain BVD86_02180 PF00120 Glutamine synthetase, catalytic domain BVD86_02190 PF03232 Ubiquinone biosynthesis protein COQ7 BVD86_02195 PF07690 Major Facilitator Superfamily BVD86_02200 PF01103 Surface antigen BVD86_02200 PF07244 Surface antigen variable number repeat BVD86_02200 PF17243 POTRA domain TamA domain 1 BVD86_02225 PF00330 Aconitase family (aconitate hydratase) BVD86_02225 PF06434 Aconitate hydratase 2 N-terminus BVD86_02225 PF11791 Aconitate B N-terminal domain BVD86_02235 PF00520 Ion transport protein BVD86_02235 PF00027 Cyclic nucleotide-binding domain BVD86_02240 PF07690 Major Facilitator Superfamily BVD86_02250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_02250 PF03466 LysR substrate binding domain BVD86_02255 PF04284 Protein of unknown function (DUF441) BVD86_02265 PF01479 S4 domain BVD86_02265 PF00849 RNA pseudouridylate synthase BVD86_02280 PF00849 RNA pseudouridylate synthase BVD86_02280 PF01479 S4 domain BVD86_02285 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BVD86_02290 PF08676 MutL C terminal dimerisation domain BVD86_02290 PF01119 DNA mismatch repair protein, C-terminal domain BVD86_02300 PF17209 Hfq protein BVD86_02310 PF00881 Nitroreductase family BVD86_02320 PF00149 Calcineurin-like phosphoesterase BVD86_02325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BVD86_02330 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BVD86_02330 PF00749 tRNA synthetases class I (E and Q), catalytic domain BVD86_02340 PF02540 NAD synthase BVD86_02340 PF00958 GMP synthase C terminal domain BVD86_02340 PF00117 Glutamine amidotransferase class-I BVD86_02345 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BVD86_02350 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BVD86_02355 PF13520 Amino acid permease BVD86_02360 PF00171 Aldehyde dehydrogenase family BVD86_02375 PF00465 Iron-containing alcohol dehydrogenase BVD86_02380 PF14493 Helix-turn-helix domain BVD86_02380 PF05970 PIF1-like helicase BVD86_02390 PF02110 Hydroxyethylthiazole kinase family BVD86_02405 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BVD86_02405 PF01433 Peptidase family M1 domain BVD86_02405 PF11940 Domain of unknown function (DUF3458) Ig-like fold BVD86_02425 PF13954 PapC N-terminal domain BVD86_02425 PF13953 PapC C-terminal domain BVD86_02425 PF00577 Outer membrane usher protein BVD86_02450 PF01817 Chorismate mutase type II BVD86_02470 PF00117 Glutamine amidotransferase class-I BVD86_02505 PF00959 Phage lysozyme BVD86_02515 PF01638 HxlR-like helix-turn-helix BVD86_02540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_02540 PF03466 LysR substrate binding domain BVD86_02570 PF04151 Bacterial pre-peptidase C-terminal domain BVD86_02575 PF16326 ABC transporter C-terminal domain BVD86_02575 PF12848 ABC transporter BVD86_02575 PF00005 ABC transporter BVD86_02580 PF00582 Universal stress protein family BVD86_02600 PF03594 Benzoate membrane transport protein BVD86_02605 PF01037 Lrp/AsnC ligand binding domain BVD86_02610 PF01810 LysE type translocator BVD86_02615 PF00923 Transaldolase/Fructose-6-phosphate aldolase BVD86_02615 PF13202 EF hand BVD86_02620 PF03466 LysR substrate binding domain BVD86_02620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_02630 PF02803 Thiolase, C-terminal domain BVD86_02630 PF00108 Thiolase, N-terminal domain BVD86_02655 PF07690 Major Facilitator Superfamily BVD86_02670 PF12169 DNA polymerase III subunits gamma and tau domain III BVD86_02670 PF12170 DNA polymerase III tau subunit V interacting with alpha BVD86_02670 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BVD86_02675 PF05506 Domain of unknown function (DUF756) BVD86_02675 PF04185 Phosphoesterase family BVD86_02680 PF03061 Thioesterase superfamily BVD86_02685 PF00465 Iron-containing alcohol dehydrogenase BVD86_02700 PF01638 HxlR-like helix-turn-helix BVD86_02710 PF01451 Low molecular weight phosphotyrosine protein phosphatase BVD86_02715 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BVD86_02715 PF01565 FAD binding domain BVD86_02740 PF01645 Conserved region in glutamate synthase BVD86_02755 PF13953 PapC C-terminal domain BVD86_02755 PF13954 PapC N-terminal domain BVD86_02755 PF00577 Outer membrane usher protein BVD86_03085 PF12833 Helix-turn-helix domain BVD86_03085 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BVD86_03095 PF12832 MFS_1 like family BVD86_03105 PF02785 Biotin carboxylase C-terminal domain BVD86_03105 PF00289 Biotin carboxylase, N-terminal domain BVD86_03105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BVD86_03110 PF00364 Biotin-requiring enzyme BVD86_03115 PF01220 Dehydroquinase class II BVD86_03125 PF00593 TonB dependent receptor BVD86_03125 PF07715 TonB-dependent Receptor Plug Domain BVD86_03130 PF03328 HpcH/HpaI aldolase/citrate lyase family BVD86_03135 PF06276 Ferric iron reductase FhuF-like transporter BVD86_03135 PF04183 IucA / IucC family BVD86_03140 PF07690 Major Facilitator Superfamily BVD86_03145 PF04183 IucA / IucC family BVD86_03145 PF06276 Ferric iron reductase FhuF-like transporter BVD86_03150 PF02423 Ornithine cyclodeaminase/mu-crystallin family BVD86_03155 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_03165 PF00005 ABC transporter BVD86_03180 PF13806 Rieske-like [2Fe-2S] domain BVD86_03180 PF18267 Rubredoxin NAD+ reductase C-terminal domain BVD86_03180 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_03180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BVD86_03180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BVD86_03180 PF04324 BFD-like [2Fe-2S] binding domain BVD86_03185 PF04324 BFD-like [2Fe-2S] binding domain BVD86_03185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BVD86_03185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BVD86_03185 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_03185 PF18267 Rubredoxin NAD+ reductase C-terminal domain BVD86_03190 PF01568 Molydopterin dinucleotide binding domain BVD86_03190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BVD86_03190 PF00384 Molybdopterin oxidoreductase BVD86_03190 PF04324 BFD-like [2Fe-2S] binding domain BVD86_03195 PF12804 MobA-like NTP transferase domain BVD86_03200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BVD86_03200 PF00384 Molybdopterin oxidoreductase BVD86_03200 PF01568 Molydopterin dinucleotide binding domain BVD86_03205 PF04055 Radical SAM superfamily BVD86_03205 PF06463 Molybdenum Cofactor Synthesis C BVD86_03215 PF02391 MoaE protein BVD86_03220 PF01967 MoaC family BVD86_03220 PF00994 Probable molybdopterin binding domain BVD86_03225 PF00994 Probable molybdopterin binding domain BVD86_03225 PF03454 MoeA C-terminal region (domain IV) BVD86_03225 PF03453 MoeA N-terminal region (domain I and II) BVD86_03230 PF01638 HxlR-like helix-turn-helix BVD86_03235 PF00155 Aminotransferase class I and II BVD86_03235 PF00392 Bacterial regulatory proteins, gntR family BVD86_03240 PF00892 EamA-like transporter family BVD86_03260 PF02635 DsrE/DsrF-like family BVD86_03265 PF16363 GDP-mannose 4,6 dehydratase BVD86_03270 PF10415 Fumarase C C-terminus BVD86_03270 PF00206 Lyase BVD86_03280 PF00561 alpha/beta hydrolase fold BVD86_03300 PF01266 FAD dependent oxidoreductase BVD86_03310 PF02542 YgbB family BVD86_03320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BVD86_03320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BVD86_03325 PF00440 Bacterial regulatory proteins, tetR family BVD86_03330 PF00158 Sigma-54 interaction domain BVD86_03330 PF00072 Response regulator receiver domain BVD86_03330 PF02954 Bacterial regulatory protein, Fis family BVD86_03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_03335 PF00512 His Kinase A (phospho-acceptor) domain BVD86_03335 PF00989 PAS fold BVD86_03345 PF04055 Radical SAM superfamily BVD86_03345 PF00919 Uncharacterized protein family UPF0004 BVD86_03345 PF18693 TRAM domain BVD86_03350 PF00696 Amino acid kinase family BVD86_03355 PF01765 Ribosome recycling factor BVD86_03360 PF01255 Putative undecaprenyl diphosphate synthase BVD86_03370 PF13288 DXP reductoisomerase C-terminal domain BVD86_03370 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BVD86_03370 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BVD86_03375 PF02163 Peptidase family M50 BVD86_03375 PF13180 PDZ domain BVD86_03375 PF17820 PDZ domain BVD86_03380 PF07244 Surface antigen variable number repeat BVD86_03380 PF01103 Surface antigen BVD86_03390 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_03390 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BVD86_03395 PF07977 FabA-like domain BVD86_03400 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_03400 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BVD86_03415 PF02631 RecX family BVD86_03420 PF00154 recA bacterial DNA recombination protein BVD86_03425 PF01479 S4 domain BVD86_03430 PF13419 Haloacid dehalogenase-like hydrolase BVD86_03445 PF01037 Lrp/AsnC ligand binding domain BVD86_03450 PF00266 Aminotransferase class-V BVD86_03455 PF00324 Amino acid permease BVD86_03470 PF00082 Subtilase family BVD86_03470 PF05922 Peptidase inhibitor I9 BVD86_03475 PF00916 Sulfate permease family BVD86_03475 PF01740 STAS domain BVD86_03485 PF07995 Glucose / Sorbosone dehydrogenase BVD86_03495 PF00990 Diguanylate cyclase, GGDEF domain BVD86_03495 PF00563 EAL domain BVD86_03495 PF03707 Bacterial signalling protein N terminal repeat BVD86_03515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BVD86_03515 PF02378 Phosphotransferase system, EIIC BVD86_03520 PF00294 pfkB family carbohydrate kinase BVD86_03525 PF02896 PEP-utilising enzyme, TIM barrel domain BVD86_03525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BVD86_03525 PF05524 PEP-utilising enzyme, N-terminal BVD86_03525 PF00391 PEP-utilising enzyme, mobile domain BVD86_03525 PF00381 PTS HPr component phosphorylation site BVD86_03545 PF03928 Haem-degrading BVD86_03550 PF05525 Branched-chain amino acid transport protein BVD86_03555 PF00557 Metallopeptidase family M24 BVD86_03560 PF03466 LysR substrate binding domain BVD86_03560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_03570 PF00462 Glutaredoxin BVD86_03575 PF00202 Aminotransferase class-III BVD86_03580 PF00571 CBS domain BVD86_03580 PF01380 SIS domain BVD86_03605 PF02881 SRP54-type protein, helical bundle domain BVD86_03605 PF00448 SRP54-type protein, GTPase domain BVD86_03630 PF08173 Membrane bound YbgT-like protein BVD86_03635 PF02322 Cytochrome bd terminal oxidase subunit II BVD86_03640 PF01654 Cytochrome bd terminal oxidase subunit I BVD86_03650 PF07290 Protein of unknown function (DUF1449) BVD86_03660 PF00294 pfkB family carbohydrate kinase BVD86_03665 PF07715 TonB-dependent Receptor Plug Domain BVD86_03665 PF00593 TonB dependent receptor BVD86_03670 PF08367 Peptidase M16C associated BVD86_03670 PF00675 Insulinase (Peptidase family M16) BVD86_03670 PF05193 Peptidase M16 inactive domain BVD86_03675 PF02253 Phospholipase A1 BVD86_03680 PF02386 Cation transport protein BVD86_03685 PF02254 TrkA-N domain BVD86_03685 PF02080 TrkA-C domain BVD86_03690 PF00585 C-terminal regulatory domain of Threonine dehydratase BVD86_03690 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_03695 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BVD86_03710 PF01118 Semialdehyde dehydrogenase, NAD binding domain BVD86_03710 PF02774 Semialdehyde dehydrogenase, dimerisation domain BVD86_03720 PF02617 ATP-dependent Clp protease adaptor protein ClpS BVD86_03725 PF10431 C-terminal, D2-small domain, of ClpB protein BVD86_03725 PF02861 Clp amino terminal domain, pathogenicity island component BVD86_03725 PF00004 ATPase family associated with various cellular activities (AAA) BVD86_03725 PF07724 AAA domain (Cdc48 subfamily) BVD86_03725 PF17871 AAA lid domain BVD86_03730 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BVD86_03735 PF00793 DAHP synthetase I family BVD86_03750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BVD86_03750 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_03780 PF00117 Glutamine amidotransferase class-I BVD86_03780 PF06418 CTP synthase N-terminus BVD86_03785 PF00793 DAHP synthetase I family BVD86_03790 PF03952 Enolase, N-terminal domain BVD86_03790 PF00113 Enolase, C-terminal TIM barrel domain BVD86_03795 PF04239 Protein of unknown function (DUF421) BVD86_03805 PF07715 TonB-dependent Receptor Plug Domain BVD86_03805 PF00593 TonB dependent receptor BVD86_03810 PF04977 Septum formation initiator BVD86_03815 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BVD86_03820 PF01144 Coenzyme A transferase BVD86_03825 PF01144 Coenzyme A transferase BVD86_03830 PF02803 Thiolase, C-terminal domain BVD86_03830 PF00108 Thiolase, N-terminal domain BVD86_03835 PF10397 Adenylosuccinate lyase C-terminus BVD86_03835 PF00206 Lyase BVD86_03840 PF00561 alpha/beta hydrolase fold BVD86_03845 PF07690 Major Facilitator Superfamily BVD86_03850 PF02627 Carboxymuconolactone decarboxylase family BVD86_03855 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BVD86_03855 PF00775 Dioxygenase BVD86_03860 PF00775 Dioxygenase BVD86_03865 PF01487 Type I 3-dehydroquinase BVD86_03870 PF05048 Periplasmic copper-binding protein (NosD) BVD86_03875 PF04966 Carbohydrate-selective porin, OprB family BVD86_03880 PF13360 PQQ-like domain BVD86_03880 PF01011 PQQ enzyme repeat BVD86_03890 PF04143 Sulphur transport BVD86_03900 PF00753 Metallo-beta-lactamase superfamily BVD86_03905 PF09339 IclR helix-turn-helix domain BVD86_03905 PF01614 Bacterial transcriptional regulator BVD86_03910 PF03466 LysR substrate binding domain BVD86_03910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_03915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_03915 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_03915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_03930 PF00106 short chain dehydrogenase BVD86_03940 PF07690 Major Facilitator Superfamily BVD86_03950 PF01425 Amidase BVD86_03955 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BVD86_03970 PF00355 Rieske [2Fe-2S] domain BVD86_03970 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BVD86_03985 PF00175 Oxidoreductase NAD-binding domain BVD86_03985 PF00111 2Fe-2S iron-sulfur cluster binding domain BVD86_03990 PF01613 Flavin reductase like domain BVD86_03995 PF12833 Helix-turn-helix domain BVD86_03995 PF02311 AraC-like ligand binding domain BVD86_04000 PF01179 Copper amine oxidase, enzyme domain BVD86_04000 PF02727 Copper amine oxidase, N2 domain BVD86_04000 PF07833 Copper amine oxidase N-terminal domain BVD86_04000 PF02728 Copper amine oxidase, N3 domain BVD86_04010 PF00732 GMC oxidoreductase BVD86_04010 PF05199 GMC oxidoreductase BVD86_04015 PF00171 Aldehyde dehydrogenase family BVD86_04020 PF12146 Serine aminopeptidase, S33 BVD86_04025 PF02803 Thiolase, C-terminal domain BVD86_04025 PF00108 Thiolase, N-terminal domain BVD86_04030 PF01144 Coenzyme A transferase BVD86_04035 PF01144 Coenzyme A transferase BVD86_04040 PF04444 Catechol dioxygenase N terminus BVD86_04040 PF00775 Dioxygenase BVD86_04045 PF02426 Muconolactone delta-isomerase BVD86_04050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BVD86_04050 PF13378 Enolase C-terminal domain-like BVD86_04055 PF03466 LysR substrate binding domain BVD86_04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_04065 PF00107 Zinc-binding dehydrogenase BVD86_04065 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_04070 PF00171 Aldehyde dehydrogenase family BVD86_04080 PF00561 alpha/beta hydrolase fold BVD86_04085 PF06628 Catalase-related immune-responsive BVD86_04085 PF00199 Catalase BVD86_04105 PF01636 Phosphotransferase enzyme family BVD86_04120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_04120 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_04120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_04130 PF02954 Bacterial regulatory protein, Fis family BVD86_04130 PF00158 Sigma-54 interaction domain BVD86_04130 PF06506 Propionate catabolism activator BVD86_04135 PF13193 AMP-binding enzyme C-terminal domain BVD86_04135 PF00501 AMP-binding enzyme BVD86_04145 PF00474 Sodium:solute symporter family BVD86_04150 PF07859 alpha/beta hydrolase fold BVD86_04155 PF01047 MarR family BVD86_04160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BVD86_04160 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_04165 PF00106 short chain dehydrogenase BVD86_04170 PF00376 MerR family regulatory protein BVD86_04170 PF09278 MerR, DNA binding BVD86_04180 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_04195 PF12706 Beta-lactamase superfamily domain BVD86_04200 PF00440 Bacterial regulatory proteins, tetR family BVD86_04200 PF08359 YsiA-like protein, C-terminal region BVD86_04205 PF03466 LysR substrate binding domain BVD86_04205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_04220 PF00106 short chain dehydrogenase BVD86_04225 PF01575 MaoC like domain BVD86_04230 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_04230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_04230 PF12806 Acetyl-CoA dehydrogenase C-terminal like BVD86_04230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_04240 PF13193 AMP-binding enzyme C-terminal domain BVD86_04240 PF00501 AMP-binding enzyme BVD86_04255 PF00440 Bacterial regulatory proteins, tetR family BVD86_04265 PF03819 MazG nucleotide pyrophosphohydrolase domain BVD86_04300 PF03466 LysR substrate binding domain BVD86_04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_04320 PF07690 Major Facilitator Superfamily BVD86_04325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BVD86_04325 PF01842 ACT domain BVD86_04325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BVD86_04330 PF03737 Aldolase/RraA BVD86_04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_04350 PF03466 LysR substrate binding domain BVD86_04355 PF00202 Aminotransferase class-III BVD86_04360 PF00171 Aldehyde dehydrogenase family BVD86_04365 PF00324 Amino acid permease BVD86_04370 PF13533 Biotin-lipoyl like BVD86_04385 PF00171 Aldehyde dehydrogenase family BVD86_04390 PF00920 Dehydratase family BVD86_04410 PF01370 NAD dependent epimerase/dehydratase family BVD86_04415 PF07690 Major Facilitator Superfamily BVD86_04420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BVD86_04420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BVD86_04425 PF12833 Helix-turn-helix domain BVD86_04425 PF06719 AraC-type transcriptional regulator N-terminus BVD86_04430 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_04430 PF00107 Zinc-binding dehydrogenase BVD86_04450 PF00005 ABC transporter BVD86_04470 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BVD86_04470 PF14572 Phosphoribosyl synthetase-associated domain BVD86_04475 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BVD86_04500 PF00196 Bacterial regulatory proteins, luxR family BVD86_04500 PF03472 Autoinducer binding domain BVD86_04505 PF01425 Amidase BVD86_04510 PF13533 Biotin-lipoyl like BVD86_04515 PF07690 Major Facilitator Superfamily BVD86_04540 PF01975 Survival protein SurE BVD86_04550 PF04607 Region found in RelA / SpoT proteins BVD86_04550 PF02824 TGS domain BVD86_04550 PF13291 ACT domain BVD86_04565 PF07693 KAP family P-loop domain BVD86_04580 PF01026 TatD related DNase BVD86_04595 PF12146 Serine aminopeptidase, S33 BVD86_04600 PF03466 LysR substrate binding domain BVD86_04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_04615 PF12146 Serine aminopeptidase, S33 BVD86_04620 PF12833 Helix-turn-helix domain BVD86_04620 PF02311 AraC-like ligand binding domain BVD86_04630 PF07969 Amidohydrolase family BVD86_04635 PF09905 DNA-binding protein VF530 BVD86_04640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_04640 PF03466 LysR substrate binding domain BVD86_04645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BVD86_04645 PF00205 Thiamine pyrophosphate enzyme, central domain BVD86_04645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BVD86_04650 PF09330 D-lactate dehydrogenase, membrane binding BVD86_04650 PF01565 FAD binding domain BVD86_04655 PF01070 FMN-dependent dehydrogenase BVD86_04660 PF01425 Amidase BVD86_04665 PF00171 Aldehyde dehydrogenase family BVD86_04670 PF07690 Major Facilitator Superfamily BVD86_04675 PF02954 Bacterial regulatory protein, Fis family BVD86_04675 PF13426 PAS domain BVD86_04675 PF00158 Sigma-54 interaction domain BVD86_04685 PF00171 Aldehyde dehydrogenase family BVD86_04690 PF00107 Zinc-binding dehydrogenase BVD86_04690 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_04705 PF00440 Bacterial regulatory proteins, tetR family BVD86_04705 PF14278 Transcriptional regulator C-terminal region BVD86_04715 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BVD86_04720 PF00027 Cyclic nucleotide-binding domain BVD86_04720 PF13545 Crp-like helix-turn-helix domain BVD86_04725 PF00884 Sulfatase BVD86_04730 PF07715 TonB-dependent Receptor Plug Domain BVD86_04730 PF00593 TonB dependent receptor BVD86_04735 PF00248 Aldo/keto reductase family BVD86_04745 PF07715 TonB-dependent Receptor Plug Domain BVD86_04745 PF00593 TonB dependent receptor BVD86_04755 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BVD86_04765 PF02472 Biopolymer transport protein ExbD/TolR BVD86_04770 PF01618 MotA/TolQ/ExbB proton channel family BVD86_04775 PF03544 Gram-negative bacterial TonB protein C-terminal BVD86_04780 PF00005 ABC transporter BVD86_04785 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_04790 PF00296 Luciferase-like monooxygenase BVD86_04795 PF00593 TonB dependent receptor BVD86_04795 PF07715 TonB-dependent Receptor Plug Domain BVD86_04805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BVD86_04810 PF02472 Biopolymer transport protein ExbD/TolR BVD86_04815 PF01618 MotA/TolQ/ExbB proton channel family BVD86_04820 PF03544 Gram-negative bacterial TonB protein C-terminal BVD86_04825 PF00296 Luciferase-like monooxygenase BVD86_04830 PF09084 NMT1/THI5 like BVD86_04835 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_04840 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_04845 PF00005 ABC transporter BVD86_04850 PF02416 mttA/Hcf106 family BVD86_04855 PF02416 mttA/Hcf106 family BVD86_04860 PF00902 Sec-independent protein translocase protein (TatC) BVD86_04865 PF00158 Sigma-54 interaction domain BVD86_04870 PF00296 Luciferase-like monooxygenase BVD86_04880 PF00593 TonB dependent receptor BVD86_04880 PF07715 TonB-dependent Receptor Plug Domain BVD86_04890 PF00664 ABC transporter transmembrane region BVD86_04890 PF00005 ABC transporter BVD86_04895 PF00005 ABC transporter BVD86_04895 PF00664 ABC transporter transmembrane region BVD86_04905 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BVD86_04905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_04905 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_04910 PF00005 ABC transporter BVD86_04910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BVD86_04915 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_04915 PF12911 N-terminal TM domain of oligopeptide transport permease C BVD86_04920 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_04925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BVD86_04930 PF00296 Luciferase-like monooxygenase BVD86_04950 PF16970 Type-1 fimbrial protein, A BVD86_04955 PF02753 Pili assembly chaperone PapD, C-terminal domain BVD86_04955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BVD86_04960 PF13954 PapC N-terminal domain BVD86_04960 PF00577 Outer membrane usher protein BVD86_04960 PF13953 PapC C-terminal domain BVD86_04965 PF00419 Fimbrial protein BVD86_04975 PF00107 Zinc-binding dehydrogenase BVD86_04975 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_04985 PF00199 Catalase BVD86_05005 PF13091 PLD-like domain BVD86_05015 PF00512 His Kinase A (phospho-acceptor) domain BVD86_05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_05015 PF00672 HAMP domain BVD86_05015 PF16527 Two-component sensor protein CpxA, periplasmic domain BVD86_05020 PF00486 Transcriptional regulatory protein, C terminal BVD86_05020 PF00072 Response regulator receiver domain BVD86_05025 PF00529 HlyD membrane-fusion protein of T1SS BVD86_05025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BVD86_05030 PF00873 AcrB/AcrD/AcrF family BVD86_05045 PF01244 Membrane dipeptidase (Peptidase family M19) BVD86_05050 PF04055 Radical SAM superfamily BVD86_05050 PF13186 Iron-sulfur cluster-binding domain BVD86_05055 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BVD86_05060 PF03070 TENA/THI-4/PQQC family BVD86_05065 PF12706 Beta-lactamase superfamily domain BVD86_05070 PF08042 PqqA family BVD86_05075 PF00149 Calcineurin-like phosphoesterase BVD86_05085 PF00857 Isochorismatase family BVD86_05085 PF00550 Phosphopantetheine attachment site BVD86_05090 PF00106 short chain dehydrogenase BVD86_05095 PF03459 TOBE domain BVD86_05095 PF00005 ABC transporter BVD86_05100 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_05110 PF03459 TOBE domain BVD86_05110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_05115 PF00355 Rieske [2Fe-2S] domain BVD86_05115 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BVD86_05120 PF00866 Ring hydroxylating beta subunit BVD86_05125 PF00970 Oxidoreductase FAD-binding domain BVD86_05125 PF00111 2Fe-2S iron-sulfur cluster binding domain BVD86_05125 PF00175 Oxidoreductase NAD-binding domain BVD86_05130 PF12833 Helix-turn-helix domain BVD86_05130 PF14525 AraC-binding-like domain BVD86_05140 PF01613 Flavin reductase like domain BVD86_05155 PF01738 Dienelactone hydrolase family BVD86_05165 PF07690 Major Facilitator Superfamily BVD86_05170 PF12833 Helix-turn-helix domain BVD86_05170 PF06719 AraC-type transcriptional regulator N-terminus BVD86_05205 PF03466 LysR substrate binding domain BVD86_05205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_05210 PF01144 Coenzyme A transferase BVD86_05215 PF01144 Coenzyme A transferase BVD86_05220 PF02667 Short chain fatty acid transporter BVD86_05225 PF00108 Thiolase, N-terminal domain BVD86_05225 PF02803 Thiolase, C-terminal domain BVD86_05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_05230 PF03466 LysR substrate binding domain BVD86_05235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_05235 PF03466 LysR substrate binding domain BVD86_05250 PF10415 Fumarase C C-terminus BVD86_05250 PF00206 Lyase BVD86_05255 PF00593 TonB dependent receptor BVD86_05255 PF07715 TonB-dependent Receptor Plug Domain BVD86_05260 PF00083 Sugar (and other) transporter BVD86_05275 PF00005 ABC transporter BVD86_05280 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_05285 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BVD86_05305 PF02417 Chromate transporter BVD86_05310 PF02525 Flavodoxin-like fold BVD86_05315 PF01638 HxlR-like helix-turn-helix BVD86_05320 PF12833 Helix-turn-helix domain BVD86_05320 PF06445 GyrI-like small molecule binding domain BVD86_05335 PF01925 Sulfite exporter TauE/SafE BVD86_05340 PF04273 Putative phosphatase (DUF442) BVD86_05340 PF00753 Metallo-beta-lactamase superfamily BVD86_05345 PF00753 Metallo-beta-lactamase superfamily BVD86_05350 PF00158 Sigma-54 interaction domain BVD86_05350 PF02954 Bacterial regulatory protein, Fis family BVD86_05350 PF00072 Response regulator receiver domain BVD86_05355 PF01062 Bestrophin, RFP-TM, chloride channel BVD86_05360 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_05360 PF00107 Zinc-binding dehydrogenase BVD86_05365 PF00106 short chain dehydrogenase BVD86_05370 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_05370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BVD86_05375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BVD86_05375 PF00364 Biotin-requiring enzyme BVD86_05375 PF02817 e3 binding domain BVD86_05380 PF02779 Transketolase, pyrimidine binding domain BVD86_05380 PF02780 Transketolase, C-terminal domain BVD86_05385 PF00676 Dehydrogenase E1 component BVD86_05390 PF04055 Radical SAM superfamily BVD86_05405 PF08448 PAS fold BVD86_05405 PF00990 Diguanylate cyclase, GGDEF domain BVD86_05415 PF01264 Chorismate synthase BVD86_05420 PF05175 Methyltransferase small domain BVD86_05425 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_05435 PF17862 AAA+ lid domain BVD86_05435 PF00004 ATPase family associated with various cellular activities (AAA) BVD86_05435 PF01434 Peptidase family M41 BVD86_05445 PF05166 YcgL domain BVD86_05465 PF03466 LysR substrate binding domain BVD86_05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_05470 PF02525 Flavodoxin-like fold BVD86_05475 PF00570 HRDC domain BVD86_05475 PF01612 3'-5' exonuclease BVD86_05480 PF13662 Toprim domain BVD86_05480 PF02132 RecR protein BVD86_05485 PF02575 YbaB/EbfC DNA-binding family BVD86_05495 PF01053 Cys/Met metabolism PLP-dependent enzyme BVD86_05500 PF00561 alpha/beta hydrolase fold BVD86_05515 PF01230 HIT domain BVD86_05540 PF02684 Lipid-A-disaccharide synthetase BVD86_05545 PF07715 TonB-dependent Receptor Plug Domain BVD86_05545 PF00593 TonB dependent receptor BVD86_05570 PF01925 Sulfite exporter TauE/SafE BVD86_05575 PF00793 DAHP synthetase I family BVD86_05580 PF02654 Cobalamin-5-phosphate synthase BVD86_05595 PF02277 Phosphoribosyltransferase BVD86_05600 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BVD86_05615 PF07715 TonB-dependent Receptor Plug Domain BVD86_05615 PF00593 TonB dependent receptor BVD86_05620 PF04073 Aminoacyl-tRNA editing domain BVD86_05630 PF03109 ABC1 family BVD86_05635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_05635 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_05635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_05640 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_05640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_05640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_05645 PF00487 Fatty acid desaturase BVD86_05650 PF12833 Helix-turn-helix domain BVD86_05650 PF12852 Cupin BVD86_05655 PF00639 PPIC-type PPIASE domain BVD86_05655 PF09312 SurA N-terminal domain BVD86_05660 PF00216 Bacterial DNA-binding protein BVD86_05675 PF02082 Transcriptional regulator BVD86_05680 PF00266 Aminotransferase class-V BVD86_05685 PF01592 NifU-like N terminal domain BVD86_05690 PF01521 Iron-sulphur cluster biosynthesis BVD86_05695 PF00226 DnaJ domain BVD86_05695 PF07743 HSCB C-terminal oligomerisation domain BVD86_05700 PF00012 Hsp70 protein BVD86_05705 PF00111 2Fe-2S iron-sulfur cluster binding domain BVD86_05710 PF00211 Adenylate and Guanylate cyclase catalytic domain BVD86_05720 PF17757 UvrB interaction domain BVD86_05720 PF00270 DEAD/DEAH box helicase BVD86_05720 PF00271 Helicase conserved C-terminal domain BVD86_05720 PF03461 TRCF domain BVD86_05720 PF02559 CarD-like/TRCF domain BVD86_05740 PF03737 Aldolase/RraA BVD86_05745 PF13460 NAD(P)H-binding BVD86_05750 PF01649 Ribosomal protein S20 BVD86_05760 PF00459 Inositol monophosphatase family BVD86_05775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BVD86_05775 PF00005 ABC transporter BVD86_05780 PF12911 N-terminal TM domain of oligopeptide transport permease C BVD86_05780 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_05785 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_05795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BVD86_05805 PF00593 TonB dependent receptor BVD86_05805 PF07715 TonB-dependent Receptor Plug Domain BVD86_05815 PF01618 MotA/TolQ/ExbB proton channel family BVD86_05820 PF02472 Biopolymer transport protein ExbD/TolR BVD86_05825 PF02472 Biopolymer transport protein ExbD/TolR BVD86_05835 PF01274 Malate synthase BVD86_05840 PF03969 AFG1-like ATPase BVD86_05850 PF00743 Flavin-binding monooxygenase-like BVD86_05855 PF03956 Lysine exporter LysO BVD86_05860 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BVD86_05870 PF00216 Bacterial DNA-binding protein BVD86_05875 PF00575 S1 RNA binding domain BVD86_05880 PF02224 Cytidylate kinase BVD86_05890 PF14437 MafB19-like deaminase BVD86_05900 PF03167 Uracil DNA glycosylase superfamily BVD86_05910 PF03934 Type II secretion system (T2SS), protein K BVD86_05915 PF11612 Type II secretion system (T2SS), protein J BVD86_05915 PF07963 Prokaryotic N-terminal methylation motif BVD86_05920 PF02501 Type II secretion system (T2SS), protein I BVD86_05920 PF07963 Prokaryotic N-terminal methylation motif BVD86_05935 PF01026 TatD related DNase BVD86_05945 PF09115 DNA polymerase III, delta subunit, C terminal BVD86_05950 PF02348 Cytidylyltransferase BVD86_05955 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BVD86_05960 PF00664 ABC transporter transmembrane region BVD86_05960 PF00005 ABC transporter BVD86_05970 PF01618 MotA/TolQ/ExbB proton channel family BVD86_05975 PF02195 ParB-like nuclease domain BVD86_05975 PF17762 HTH domain found in ParB protein BVD86_05980 PF13614 AAA domain BVD86_05985 PF02527 rRNA small subunit methyltransferase G BVD86_05990 PF00483 Nucleotidyl transferase BVD86_05995 PF01636 Phosphotransferase enzyme family BVD86_06000 PF04453 LPS transport system D BVD86_06000 PF03968 OstA-like protein BVD86_06005 PF09312 SurA N-terminal domain BVD86_06005 PF00639 PPIC-type PPIASE domain BVD86_06010 PF01116 Fructose-bisphosphate aldolase class-II BVD86_06020 PF00162 Phosphoglycerate kinase BVD86_06030 PF02545 Maf-like protein BVD86_06035 PF08007 Cupin superfamily protein BVD86_06050 PF00375 Sodium:dicarboxylate symporter family BVD86_06055 PF06912 Protein of unknown function (DUF1275) BVD86_06060 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BVD86_06070 PF00005 ABC transporter BVD86_06070 PF00664 ABC transporter transmembrane region BVD86_06080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BVD86_06080 PF12833 Helix-turn-helix domain BVD86_06085 PF01597 Glycine cleavage H-protein BVD86_06090 PF02146 Sir2 family BVD86_06095 PF00474 Sodium:solute symporter family BVD86_06100 PF01037 Lrp/AsnC ligand binding domain BVD86_06105 PF01619 Proline dehydrogenase BVD86_06105 PF14850 DNA-binding domain of Proline dehydrogenase BVD86_06105 PF00171 Aldehyde dehydrogenase family BVD86_06105 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BVD86_06110 PF04229 GrpB protein BVD86_06115 PF05958 tRNA (Uracil-5-)-methyltransferase BVD86_06125 PF09992 Phosphodiester glycosidase BVD86_06135 PF04264 YceI-like domain BVD86_06145 PF00456 Transketolase, thiamine diphosphate binding domain BVD86_06145 PF02779 Transketolase, pyrimidine binding domain BVD86_06145 PF02780 Transketolase, C-terminal domain BVD86_06150 PF00438 S-adenosylmethionine synthetase, N-terminal domain BVD86_06150 PF02772 S-adenosylmethionine synthetase, central domain BVD86_06150 PF02773 S-adenosylmethionine synthetase, C-terminal domain BVD86_06170 PF00905 Penicillin binding protein transpeptidase domain BVD86_06185 PF02075 Crossover junction endodeoxyribonuclease RuvC BVD86_06190 PF01256 Carbohydrate kinase BVD86_06190 PF03853 YjeF-related protein N-terminus BVD86_06195 PF08331 Domain of unknown function (DUF1730) BVD86_06200 PF04055 Radical SAM superfamily BVD86_06200 PF06968 Biotin and Thiamin Synthesis associated domain BVD86_06215 PF16970 Type-1 fimbrial protein, A BVD86_06220 PF02753 Pili assembly chaperone PapD, C-terminal domain BVD86_06220 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BVD86_06225 PF00577 Outer membrane usher protein BVD86_06225 PF13954 PapC N-terminal domain BVD86_06225 PF13953 PapC C-terminal domain BVD86_06230 PF00419 Fimbrial protein BVD86_06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06240 PF03466 LysR substrate binding domain BVD86_06245 PF00892 EamA-like transporter family BVD86_06255 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BVD86_06265 PF03466 LysR substrate binding domain BVD86_06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06280 PF00440 Bacterial regulatory proteins, tetR family BVD86_06290 PF01709 Transcriptional regulator BVD86_06295 PF01037 Lrp/AsnC ligand binding domain BVD86_06305 PF00005 ABC transporter BVD86_06310 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_06315 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_06330 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BVD86_06330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_06340 PF00296 Luciferase-like monooxygenase BVD86_06345 PF03180 NLPA lipoprotein BVD86_06350 PF03180 NLPA lipoprotein BVD86_06355 PF00005 ABC transporter BVD86_06355 PF09383 NIL domain BVD86_06360 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_06365 PF01926 50S ribosome-binding GTPase BVD86_06365 PF06071 Protein of unknown function (DUF933) BVD86_06390 PF03591 AzlC protein BVD86_06395 PF05437 Branched-chain amino acid transport protein (AzlD) BVD86_06405 PF02222 ATP-grasp domain BVD86_06410 PF01966 HD domain BVD86_06410 PF01909 Nucleotidyltransferase domain BVD86_06410 PF08335 GlnD PII-uridylyltransferase BVD86_06415 PF00155 Aminotransferase class I and II BVD86_06425 PF12833 Helix-turn-helix domain BVD86_06425 PF02311 AraC-like ligand binding domain BVD86_06430 PF00255 Glutathione peroxidase BVD86_06435 PF01641 SelR domain BVD86_06440 PF00155 Aminotransferase class I and II BVD86_06445 PF00375 Sodium:dicarboxylate symporter family BVD86_06450 PF00710 Asparaginase, N-terminal BVD86_06450 PF17763 Glutaminase/Asparaginase C-terminal domain BVD86_06455 PF07733 Bacterial DNA polymerase III alpha NTPase domain BVD86_06455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BVD86_06455 PF14579 Helix-hairpin-helix motif BVD86_06455 PF02811 PHP domain BVD86_06455 PF01336 OB-fold nucleic acid binding domain BVD86_06460 PF00588 SpoU rRNA Methylase family BVD86_06465 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_06480 PF13192 Thioredoxin domain BVD86_06480 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_06495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06495 PF03466 LysR substrate binding domain BVD86_06500 PF01758 Sodium Bile acid symporter family BVD86_06505 PF01022 Bacterial regulatory protein, arsR family BVD86_06510 PF03960 ArsC family BVD86_06520 PF13382 Adenine deaminase C-terminal domain BVD86_06520 PF01979 Amidohydrolase family BVD86_06530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06530 PF03466 LysR substrate binding domain BVD86_06540 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BVD86_06545 PF01177 Asp/Glu/Hydantoin racemase BVD86_06550 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BVD86_06555 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_06560 PF00005 ABC transporter BVD86_06565 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BVD86_06575 PF00083 Sugar (and other) transporter BVD86_06580 PF00296 Luciferase-like monooxygenase BVD86_06585 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_06585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_06585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BVD86_06600 PF01654 Cytochrome bd terminal oxidase subunit I BVD86_06605 PF02322 Cytochrome bd terminal oxidase subunit II BVD86_06615 PF00392 Bacterial regulatory proteins, gntR family BVD86_06615 PF00155 Aminotransferase class I and II BVD86_06620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06620 PF03466 LysR substrate binding domain BVD86_06635 PF00698 Acyl transferase domain BVD86_06640 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BVD86_06650 PF01039 Carboxyl transferase domain BVD86_06655 PF06857 Malonate decarboxylase delta subunit (MdcD) BVD86_06660 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BVD86_06665 PF16957 Malonate decarboxylase, alpha subunit, transporter BVD86_06670 PF07690 Major Facilitator Superfamily BVD86_06685 PF00392 Bacterial regulatory proteins, gntR family BVD86_06685 PF00155 Aminotransferase class I and II BVD86_06690 PF04172 LrgB-like family BVD86_06695 PF03788 LrgA family BVD86_06700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06700 PF03466 LysR substrate binding domain BVD86_06705 PF14834 Glutathione S-transferase, C-terminal domain BVD86_06705 PF02798 Glutathione S-transferase, N-terminal domain BVD86_06710 PF02798 Glutathione S-transferase, N-terminal domain BVD86_06730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06730 PF03466 LysR substrate binding domain BVD86_06740 PF00581 Rhodanese-like domain BVD86_06745 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_06755 PF00266 Aminotransferase class-V BVD86_06765 PF01810 LysE type translocator BVD86_06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06770 PF03466 LysR substrate binding domain BVD86_06780 PF00497 Bacterial extracellular solute-binding proteins, family 3 BVD86_06785 PF00497 Bacterial extracellular solute-binding proteins, family 3 BVD86_06790 PF00005 ABC transporter BVD86_06795 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_06800 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_06815 PF07690 Major Facilitator Superfamily BVD86_06820 PF03466 LysR substrate binding domain BVD86_06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06830 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BVD86_06835 PF00072 Response regulator receiver domain BVD86_06840 PF00072 Response regulator receiver domain BVD86_06840 PF00512 His Kinase A (phospho-acceptor) domain BVD86_06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_06840 PF09308 LuxQ, periplasmic BVD86_06850 PF01037 Lrp/AsnC ligand binding domain BVD86_06850 PF13404 AsnC-type helix-turn-helix domain BVD86_06860 PF00717 Peptidase S24-like BVD86_06885 PF18011 C-terminal domain found in long catalases BVD86_06885 PF00199 Catalase BVD86_06885 PF06628 Catalase-related immune-responsive BVD86_06930 PF03466 LysR substrate binding domain BVD86_06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06945 PF07690 Major Facilitator Superfamily BVD86_06960 PF00501 AMP-binding enzyme BVD86_06960 PF13193 AMP-binding enzyme C-terminal domain BVD86_06965 PF00440 Bacterial regulatory proteins, tetR family BVD86_06970 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_06970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_06970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_06975 PF01039 Carboxyl transferase domain BVD86_06980 PF00378 Enoyl-CoA hydratase/isomerase BVD86_06985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BVD86_06985 PF00364 Biotin-requiring enzyme BVD86_06985 PF00289 Biotin carboxylase, N-terminal domain BVD86_06985 PF02785 Biotin carboxylase C-terminal domain BVD86_06990 PF00682 HMGL-like BVD86_06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_06995 PF03466 LysR substrate binding domain BVD86_07010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_07010 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_07010 PF12806 Acetyl-CoA dehydrogenase C-terminal like BVD86_07010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_07020 PF07690 Major Facilitator Superfamily BVD86_07030 PF01144 Coenzyme A transferase BVD86_07035 PF01144 Coenzyme A transferase BVD86_07040 PF07690 Major Facilitator Superfamily BVD86_07045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_07045 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_07045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_07050 PF00378 Enoyl-CoA hydratase/isomerase BVD86_07055 PF00106 short chain dehydrogenase BVD86_07065 PF02803 Thiolase, C-terminal domain BVD86_07065 PF00108 Thiolase, N-terminal domain BVD86_07070 PF09339 IclR helix-turn-helix domain BVD86_07075 PF07690 Major Facilitator Superfamily BVD86_07080 PF03060 Nitronate monooxygenase BVD86_07085 PF00378 Enoyl-CoA hydratase/isomerase BVD86_07090 PF09339 IclR helix-turn-helix domain BVD86_07095 PF02515 CoA-transferase family III BVD86_07100 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_07100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_07100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_07105 PF07690 Major Facilitator Superfamily BVD86_07110 PF13419 Haloacid dehalogenase-like hydrolase BVD86_07115 PF00266 Aminotransferase class-V BVD86_07120 PF01266 FAD dependent oxidoreductase BVD86_07125 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_07130 PF00005 ABC transporter BVD86_07130 PF08402 TOBE domain BVD86_07140 PF00392 Bacterial regulatory proteins, gntR family BVD86_07140 PF07702 UTRA domain BVD86_07145 PF01168 Alanine racemase, N-terminal domain BVD86_07145 PF00842 Alanine racemase, C-terminal domain BVD86_07150 PF01494 FAD binding domain BVD86_07155 PF01614 Bacterial transcriptional regulator BVD86_07155 PF09339 IclR helix-turn-helix domain BVD86_07160 PF02525 Flavodoxin-like fold BVD86_07165 PF03466 LysR substrate binding domain BVD86_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_07170 PF02627 Carboxymuconolactone decarboxylase family BVD86_07175 PF00171 Aldehyde dehydrogenase family BVD86_07185 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BVD86_07195 PF00171 Aldehyde dehydrogenase family BVD86_07200 PF00296 Luciferase-like monooxygenase BVD86_07235 PF07690 Major Facilitator Superfamily BVD86_07240 PF00682 HMGL-like BVD86_07245 PF02515 CoA-transferase family III BVD86_07290 PF03061 Thioesterase superfamily BVD86_07295 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_07300 PF08223 PaaX-like protein C-terminal domain BVD86_07300 PF07848 PaaX-like protein BVD86_07305 PF00501 AMP-binding enzyme BVD86_07305 PF14535 AMP-binding enzyme C-terminal domain BVD86_07310 PF02803 Thiolase, C-terminal domain BVD86_07310 PF00108 Thiolase, N-terminal domain BVD86_07315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BVD86_07315 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BVD86_07315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BVD86_07320 PF00378 Enoyl-CoA hydratase/isomerase BVD86_07325 PF00378 Enoyl-CoA hydratase/isomerase BVD86_07330 PF00970 Oxidoreductase FAD-binding domain BVD86_07330 PF00111 2Fe-2S iron-sulfur cluster binding domain BVD86_07330 PF00175 Oxidoreductase NAD-binding domain BVD86_07335 PF01883 Iron-sulfur cluster assembly protein BVD86_07340 PF05138 Phenylacetic acid catabolic protein BVD86_07345 PF06243 Phenylacetic acid degradation B BVD86_07350 PF05138 Phenylacetic acid catabolic protein BVD86_07355 PF00171 Aldehyde dehydrogenase family BVD86_07355 PF01575 MaoC like domain BVD86_07360 PF03313 Serine dehydratase alpha chain BVD86_07360 PF03315 Serine dehydratase beta chain BVD86_07365 PF13520 Amino acid permease BVD86_07370 PF00171 Aldehyde dehydrogenase family BVD86_07375 PF00083 Sugar (and other) transporter BVD86_07385 PF04324 BFD-like [2Fe-2S] binding domain BVD86_07385 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_07395 PF01266 FAD dependent oxidoreductase BVD86_07400 PF05544 Proline racemase BVD86_07405 PF00392 Bacterial regulatory proteins, gntR family BVD86_07415 PF00701 Dihydrodipicolinate synthetase family BVD86_07430 PF09278 MerR, DNA binding BVD86_07430 PF00376 MerR family regulatory protein BVD86_07440 PF02677 Epoxyqueuosine reductase QueH BVD86_07445 PF00392 Bacterial regulatory proteins, gntR family BVD86_07445 PF00155 Aminotransferase class I and II BVD86_07460 PF07690 Major Facilitator Superfamily BVD86_07465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BVD86_07475 PF03466 LysR substrate binding domain BVD86_07475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_07505 PF10431 C-terminal, D2-small domain, of ClpB protein BVD86_07505 PF17871 AAA lid domain BVD86_07505 PF07724 AAA domain (Cdc48 subfamily) BVD86_07505 PF00004 ATPase family associated with various cellular activities (AAA) BVD86_07515 PF18393 MotY N-terminal domain BVD86_07515 PF00691 OmpA family BVD86_07570 PF03781 Sulfatase-modifying factor enzyme 1 BVD86_07600 PF05593 RHS Repeat BVD86_07600 PF05488 PAAR motif BVD86_07610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_07610 PF03466 LysR substrate binding domain BVD86_07615 PF07690 Major Facilitator Superfamily BVD86_07630 PF00005 ABC transporter BVD86_07640 PF01425 Amidase BVD86_07645 PF08753 NikR C terminal nickel binding domain BVD86_07645 PF01402 Ribbon-helix-helix protein, copG family BVD86_07655 PF01638 HxlR-like helix-turn-helix BVD86_07660 PF02525 Flavodoxin-like fold BVD86_07665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BVD86_07665 PF00289 Biotin carboxylase, N-terminal domain BVD86_07665 PF02785 Biotin carboxylase C-terminal domain BVD86_07680 PF00107 Zinc-binding dehydrogenase BVD86_07680 PF13823 Alcohol dehydrogenase GroES-associated BVD86_07680 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_07685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BVD86_07685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BVD86_07690 PF00892 EamA-like transporter family BVD86_07720 PF00654 Voltage gated chloride channel BVD86_07725 PF00289 Biotin carboxylase, N-terminal domain BVD86_07725 PF02785 Biotin carboxylase C-terminal domain BVD86_07725 PF00364 Biotin-requiring enzyme BVD86_07725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BVD86_07735 PF07286 Protein of unknown function (DUF1445) BVD86_07740 PF03746 LamB/YcsF family BVD86_07745 PF01566 Natural resistance-associated macrophage protein BVD86_07750 PF03466 LysR substrate binding domain BVD86_07750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_07760 PF08281 Sigma-70, region 4 BVD86_07760 PF04542 Sigma-70 region 2 BVD86_07770 PF05114 Protein of unknown function (DUF692) BVD86_07835 PF00440 Bacterial regulatory proteins, tetR family BVD86_07845 PF00561 alpha/beta hydrolase fold BVD86_07850 PF07859 alpha/beta hydrolase fold BVD86_07855 PF00563 EAL domain BVD86_07855 PF00990 Diguanylate cyclase, GGDEF domain BVD86_07855 PF03707 Bacterial signalling protein N terminal repeat BVD86_07880 PF07690 Major Facilitator Superfamily BVD86_07885 PF01292 Prokaryotic cytochrome b561 BVD86_07890 PF00199 Catalase BVD86_07895 PF01638 HxlR-like helix-turn-helix BVD86_07920 PF00313 'Cold-shock' DNA-binding domain BVD86_07950 PF00892 EamA-like transporter family BVD86_07955 PF01037 Lrp/AsnC ligand binding domain BVD86_07960 PF13520 Amino acid permease BVD86_07965 PF01636 Phosphotransferase enzyme family BVD86_07975 PF12833 Helix-turn-helix domain BVD86_07975 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BVD86_07980 PF00202 Aminotransferase class-III BVD86_07985 PF05190 MutS family domain IV BVD86_07985 PF00488 MutS domain V BVD86_07985 PF01624 MutS domain I BVD86_07985 PF05192 MutS domain III BVD86_07985 PF05188 MutS domain II BVD86_07995 PF00037 4Fe-4S binding domain BVD86_07995 PF11953 Domain of unknown function (DUF3470) BVD86_08005 PF01596 O-methyltransferase BVD86_08015 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_08020 PF01205 Uncharacterized protein family UPF0029 BVD86_08025 PF13533 Biotin-lipoyl like BVD86_08030 PF00005 ABC transporter BVD86_08030 PF00664 ABC transporter transmembrane region BVD86_08030 PF03412 Peptidase C39 family BVD86_08035 PF02321 Outer membrane efflux protein BVD86_08040 PF00005 ABC transporter BVD86_08040 PF12399 Branched-chain amino acid ATP-binding cassette transporter BVD86_08045 PF03968 OstA-like protein BVD86_08060 PF01380 SIS domain BVD86_08060 PF00571 CBS domain BVD86_08065 PF01406 tRNA synthetases class I (C) catalytic domain BVD86_08065 PF09190 DALR domain BVD86_08100 PF01638 HxlR-like helix-turn-helix BVD86_08105 PF07690 Major Facilitator Superfamily BVD86_08115 PF00924 Mechanosensitive ion channel BVD86_08160 PF00440 Bacterial regulatory proteins, tetR family BVD86_08190 PF08241 Methyltransferase domain BVD86_08195 PF13419 Haloacid dehalogenase-like hydrolase BVD86_08200 PF01037 Lrp/AsnC ligand binding domain BVD86_08210 PF14748 Pyrroline-5-carboxylate reductase dimerisation BVD86_08210 PF03807 NADP oxidoreductase coenzyme F420-dependent BVD86_08220 PF00313 'Cold-shock' DNA-binding domain BVD86_08225 PF03279 Bacterial lipid A biosynthesis acyltransferase BVD86_08230 PF01810 LysE type translocator BVD86_08270 PF13742 OB-fold nucleic acid binding domain BVD86_08270 PF02601 Exonuclease VII, large subunit BVD86_08310 PF00376 MerR family regulatory protein BVD86_08310 PF09278 MerR, DNA binding BVD86_08315 PF00403 Heavy-metal-associated domain BVD86_08325 PF02954 Bacterial regulatory protein, Fis family BVD86_08325 PF02830 V4R domain BVD86_08325 PF00158 Sigma-54 interaction domain BVD86_08325 PF06505 Activator of aromatic catabolism BVD86_08335 PF06099 Phenol hydroxylase subunit BVD86_08340 PF02332 Methane/Phenol/Toluene Hydroxylase BVD86_08345 PF02406 MmoB/DmpM family BVD86_08350 PF02332 Methane/Phenol/Toluene Hydroxylase BVD86_08350 PF04945 YHS domain BVD86_08360 PF00175 Oxidoreductase NAD-binding domain BVD86_08360 PF00111 2Fe-2S iron-sulfur cluster binding domain BVD86_08360 PF00970 Oxidoreductase FAD-binding domain BVD86_08370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_08370 PF03466 LysR substrate binding domain BVD86_08380 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BVD86_08380 PF00355 Rieske [2Fe-2S] domain BVD86_08390 PF00175 Oxidoreductase NAD-binding domain BVD86_08390 PF00111 2Fe-2S iron-sulfur cluster binding domain BVD86_08390 PF00970 Oxidoreductase FAD-binding domain BVD86_08395 PF00106 short chain dehydrogenase BVD86_08400 PF03594 Benzoate membrane transport protein BVD86_08405 PF07690 Major Facilitator Superfamily BVD86_08415 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BVD86_08415 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BVD86_08420 PF11898 Domain of unknown function (DUF3418) BVD86_08420 PF00270 DEAD/DEAH box helicase BVD86_08420 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BVD86_08420 PF00271 Helicase conserved C-terminal domain BVD86_08420 PF04408 Helicase associated domain (HA2) BVD86_08425 PF10417 C-terminal domain of 1-Cys peroxiredoxin BVD86_08425 PF00578 AhpC/TSA family BVD86_08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_08445 PF13192 Thioredoxin domain BVD86_08455 PF00043 Glutathione S-transferase, C-terminal domain BVD86_08455 PF02798 Glutathione S-transferase, N-terminal domain BVD86_08465 PF02390 Putative methyltransferase BVD86_08475 PF13417 Glutathione S-transferase, N-terminal domain BVD86_08475 PF00043 Glutathione S-transferase, C-terminal domain BVD86_08485 PF00691 OmpA family BVD86_08485 PF13488 Glycine zipper BVD86_08490 PF01979 Amidohydrolase family BVD86_08495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BVD86_08495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BVD86_08505 PF10672 S-adenosylmethionine-dependent methyltransferase BVD86_08505 PF02926 THUMP domain BVD86_08505 PF01170 Putative RNA methylase family UPF0020 BVD86_08520 PF07724 AAA domain (Cdc48 subfamily) BVD86_08520 PF17871 AAA lid domain BVD86_08520 PF02861 Clp amino terminal domain, pathogenicity island component BVD86_08520 PF10431 C-terminal, D2-small domain, of ClpB protein BVD86_08520 PF00004 ATPase family associated with various cellular activities (AAA) BVD86_08535 PF02566 OsmC-like protein BVD86_08545 PF00027 Cyclic nucleotide-binding domain BVD86_08545 PF13545 Crp-like helix-turn-helix domain BVD86_08550 PF00248 Aldo/keto reductase family BVD86_08565 PF00709 Adenylosuccinate synthetase BVD86_08570 PF13393 Histidyl-tRNA synthetase BVD86_08575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BVD86_08575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BVD86_08580 PF01411 tRNA synthetases class II (A) BVD86_08580 PF02272 DHHA1 domain BVD86_08580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BVD86_08585 PF01842 ACT domain BVD86_08585 PF00696 Amino acid kinase family BVD86_08585 PF13840 ACT domain BVD86_08590 PF02599 Global regulator protein family BVD86_08595 PF01351 Ribonuclease HII BVD86_08605 PF01292 Prokaryotic cytochrome b561 BVD86_08610 PF00962 Adenosine/AMP deaminase BVD86_08615 PF00860 Permease family BVD86_08625 PF02678 Pirin BVD86_08625 PF17954 Quercetinase C-terminal cupin domain BVD86_08630 PF00440 Bacterial regulatory proteins, tetR family BVD86_08630 PF17932 Tetracyclin repressor-like, C-terminal domain BVD86_08640 PF00106 short chain dehydrogenase BVD86_08645 PF00743 Flavin-binding monooxygenase-like BVD86_08650 PF04072 Leucine carboxyl methyltransferase BVD86_08655 PF03466 LysR substrate binding domain BVD86_08655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_08660 PF07690 Major Facilitator Superfamily BVD86_08665 PF05681 Fumarate hydratase (Fumerase) BVD86_08670 PF05683 Fumarase C-terminus BVD86_08680 PF00743 Flavin-binding monooxygenase-like BVD86_08685 PF00106 short chain dehydrogenase BVD86_08690 PF07859 alpha/beta hydrolase fold BVD86_08695 PF05199 GMC oxidoreductase BVD86_08700 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BVD86_08700 PF18381 YcaO cyclodehydratase C-terminal domain BVD86_08705 PF03573 outer membrane porin, OprD family BVD86_08710 PF07690 Major Facilitator Superfamily BVD86_08715 PF00884 Sulfatase BVD86_08720 PF03781 Sulfatase-modifying factor enzyme 1 BVD86_08730 PF00355 Rieske [2Fe-2S] domain BVD86_08735 PF00111 2Fe-2S iron-sulfur cluster binding domain BVD86_08735 PF00175 Oxidoreductase NAD-binding domain BVD86_08755 PF07690 Major Facilitator Superfamily BVD86_08760 PF00378 Enoyl-CoA hydratase/isomerase BVD86_08765 PF00171 Aldehyde dehydrogenase family BVD86_08775 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_08775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_08775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_08780 PF03573 outer membrane porin, OprD family BVD86_08795 PF07519 Tannase and feruloyl esterase BVD86_08800 PF00892 EamA-like transporter family BVD86_08835 PF14245 Type IV pilin PilA BVD86_08835 PF07963 Prokaryotic N-terminal methylation motif BVD86_08840 PF07963 Prokaryotic N-terminal methylation motif BVD86_08840 PF08334 Type II secretion system (T2SS), protein G BVD86_08845 PF03958 Bacterial type II/III secretion system short domain BVD86_08845 PF00263 Bacterial type II and III secretion system protein BVD86_08875 PF00482 Type II secretion system (T2SS), protein F BVD86_08880 PF08334 Type II secretion system (T2SS), protein G BVD86_08880 PF07963 Prokaryotic N-terminal methylation motif BVD86_08895 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BVD86_08895 PF12833 Helix-turn-helix domain BVD86_08900 PF00171 Aldehyde dehydrogenase family BVD86_08925 PF00324 Amino acid permease BVD86_08930 PF04958 Arginine N-succinyltransferase beta subunit BVD86_08935 PF00202 Aminotransferase class-III BVD86_08945 PF00171 Aldehyde dehydrogenase family BVD86_08955 PF00392 Bacterial regulatory proteins, gntR family BVD86_08955 PF07729 FCD domain BVD86_08965 PF00324 Amino acid permease BVD86_08970 PF01266 FAD dependent oxidoreductase BVD86_08975 PF00324 Amino acid permease BVD86_09005 PF05593 RHS Repeat BVD86_09005 PF03527 RHS protein BVD86_09010 PF04717 Type VI secretion system, phage-baseplate injector BVD86_09025 PF05987 Bacterial protein of unknown function (DUF898) BVD86_09040 PF14659 Phage integrase, N-terminal SAM-like domain BVD86_09040 PF00589 Phage integrase family BVD86_09040 PF13356 Arm DNA-binding domain BVD86_09045 PF00107 Zinc-binding dehydrogenase BVD86_09045 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_09050 PF00171 Aldehyde dehydrogenase family BVD86_09100 PF13333 Integrase core domain BVD86_09100 PF00665 Integrase core domain BVD86_09100 PF13276 HTH-like domain BVD86_09125 PF03466 LysR substrate binding domain BVD86_09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_09130 PF00850 Histone deacetylase domain BVD86_09135 PF07687 Peptidase dimerisation domain BVD86_09135 PF01546 Peptidase family M20/M25/M40 BVD86_09140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BVD86_09145 PF00596 Class II Aldolase and Adducin N-terminal domain BVD86_09150 PF00083 Sugar (and other) transporter BVD86_09150 PF07690 Major Facilitator Superfamily BVD86_09155 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BVD86_09160 PF00171 Aldehyde dehydrogenase family BVD86_09165 PF04958 Arginine N-succinyltransferase beta subunit BVD86_09170 PF00202 Aminotransferase class-III BVD86_09175 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BVD86_09175 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BVD86_09180 PF00324 Amino acid permease BVD86_09190 PF01037 Lrp/AsnC ligand binding domain BVD86_09215 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_09220 PF00324 Amino acid permease BVD86_09225 PF12833 Helix-turn-helix domain BVD86_09255 PF00440 Bacterial regulatory proteins, tetR family BVD86_09270 PF00580 UvrD/REP helicase N-terminal domain BVD86_09270 PF13361 UvrD-like helicase C-terminal domain BVD86_09270 PF12462 DNA helicase IV / RNA helicase N terminal BVD86_09370 PF00324 Amino acid permease BVD86_09375 PF00171 Aldehyde dehydrogenase family BVD86_09390 PF13556 PucR C-terminal helix-turn-helix domain BVD86_09390 PF06018 CodY GAF-like domain BVD86_09390 PF17853 GGDEF-like domain BVD86_09405 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_09405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BVD86_09410 PF00764 Arginosuccinate synthase BVD86_09415 PF00990 Diguanylate cyclase, GGDEF domain BVD86_09415 PF00563 EAL domain BVD86_09415 PF00360 Phytochrome region BVD86_09415 PF01590 GAF domain BVD86_09420 PF01979 Amidohydrolase family BVD86_09425 PF00929 Exonuclease BVD86_09435 PF00593 TonB dependent receptor BVD86_09435 PF07715 TonB-dependent Receptor Plug Domain BVD86_09440 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_09440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BVD86_09445 PF00005 ABC transporter BVD86_09445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BVD86_09450 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_09450 PF12911 N-terminal TM domain of oligopeptide transport permease C BVD86_09455 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_09460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BVD86_09465 PF01476 LysM domain BVD86_09465 PF01464 Transglycosylase SLT domain BVD86_09465 PF01476 LysM domain BVD86_09465 PF01464 Transglycosylase SLT domain BVD86_09470 PF00929 Exonuclease BVD86_09480 PF00293 NUDIX domain BVD86_09480 PF09297 NADH pyrophosphatase zinc ribbon domain BVD86_09490 PF04972 BON domain BVD86_09495 PF02021 Uncharacterised protein family UPF0102 BVD86_09500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BVD86_09505 PF03466 LysR substrate binding domain BVD86_09505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_09510 PF01810 LysE type translocator BVD86_09520 PF13411 MerR HTH family regulatory protein BVD86_09530 PF01494 FAD binding domain BVD86_09535 PF01494 FAD binding domain BVD86_09540 PF05195 Aminopeptidase P, N-terminal domain BVD86_09540 PF00557 Metallopeptidase family M24 BVD86_09580 PF00717 Peptidase S24-like BVD86_09585 PF13438 Domain of unknown function (DUF4113) BVD86_09585 PF00817 impB/mucB/samB family BVD86_09585 PF11799 impB/mucB/samB family C-terminal domain BVD86_09875 PF01812 5-formyltetrahydrofolate cyclo-ligase family BVD86_09880 PF05362 Lon protease (S16) C-terminal proteolytic domain BVD86_09880 PF00004 ATPase family associated with various cellular activities (AAA) BVD86_09880 PF02190 ATP-dependent protease La (LON) substrate-binding domain BVD86_09885 PF02590 Predicted SPOUT methyltransferase BVD86_09890 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BVD86_09900 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BVD86_09900 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BVD86_09905 PF04060 Putative Fe-S cluster BVD86_09910 PF00633 Helix-hairpin-helix motif BVD86_09910 PF10576 Iron-sulfur binding domain of endonuclease III BVD86_09910 PF00730 HhH-GPD superfamily base excision DNA repair protein BVD86_09920 PF05191 Adenylate kinase, active site lid BVD86_09935 PF00905 Penicillin binding protein transpeptidase domain BVD86_09935 PF03717 Penicillin-binding Protein dimerisation domain BVD86_09950 PF02492 CobW/HypB/UreG, nucleotide-binding domain BVD86_09955 PF01730 UreF BVD86_09960 PF02814 UreE urease accessory protein, N-terminal domain BVD86_09960 PF05194 UreE urease accessory protein, C-terminal domain BVD86_09965 PF00449 Urease alpha-subunit, N-terminal domain BVD86_09965 PF01979 Amidohydrolase family BVD86_09970 PF00699 Urease beta subunit BVD86_09975 PF00547 Urease, gamma subunit BVD86_09980 PF01774 UreD urease accessory protein BVD86_09990 PF04170 NlpE N-terminal domain BVD86_09990 PF17185 NlpE C-terminal OB domain BVD86_09995 PF00463 Isocitrate lyase family BVD86_10000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_10000 PF03466 LysR substrate binding domain BVD86_10005 PF01595 Cyclin M transmembrane N-terminal domain BVD86_10005 PF00571 CBS domain BVD86_10005 PF03471 Transporter associated domain BVD86_10010 PF03600 Citrate transporter BVD86_10025 PF00009 Elongation factor Tu GTP binding domain BVD86_10030 PF01507 Phosphoadenosine phosphosulfate reductase family BVD86_10040 PF14052 Capsule assembly protein Wzi BVD86_10045 PF00152 tRNA synthetases class II (D, K and N) BVD86_10045 PF01336 OB-fold nucleic acid binding domain BVD86_10060 PF00301 Rubredoxin BVD86_10065 PF18113 Rubredoxin binding C-terminal domain BVD86_10065 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_10070 PF00561 alpha/beta hydrolase fold BVD86_10075 PF03466 LysR substrate binding domain BVD86_10075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_10090 PF13090 Polyphosphate kinase C-terminal domain 2 BVD86_10090 PF02503 Polyphosphate kinase middle domain BVD86_10090 PF13089 Polyphosphate kinase N-terminal domain BVD86_10090 PF17941 Polyphosphate kinase C-terminal domain 1 BVD86_10095 PF00912 Transglycosylase BVD86_10100 PF01694 Rhomboid family BVD86_10110 PF00005 ABC transporter BVD86_10115 PF13472 GDSL-like Lipase/Acylhydrolase family BVD86_10120 PF00484 Carbonic anhydrase BVD86_10125 PF00561 alpha/beta hydrolase fold BVD86_10135 PF07715 TonB-dependent Receptor Plug Domain BVD86_10135 PF00593 TonB dependent receptor BVD86_10140 PF01521 Iron-sulphur cluster biosynthesis BVD86_10140 PF01106 NifU-like domain BVD86_10150 PF00884 Sulfatase BVD86_10155 PF03781 Sulfatase-modifying factor enzyme 1 BVD86_10170 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_10175 PF01384 Phosphate transporter family BVD86_10180 PF02574 Homocysteine S-methyltransferase BVD86_10180 PF00809 Pterin binding enzyme BVD86_10180 PF02607 B12 binding domain BVD86_10180 PF02965 Vitamin B12 dependent methionine synthase, activation domain BVD86_10180 PF02310 B12 binding domain BVD86_10185 PF02780 Transketolase, C-terminal domain BVD86_10185 PF02779 Transketolase, pyrimidine binding domain BVD86_10190 PF00456 Transketolase, thiamine diphosphate binding domain BVD86_10195 PF07690 Major Facilitator Superfamily BVD86_10205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_10205 PF03466 LysR substrate binding domain BVD86_10220 PF01263 Aldose 1-epimerase BVD86_10225 PF07690 Major Facilitator Superfamily BVD86_10230 PF02311 AraC-like ligand binding domain BVD86_10230 PF12833 Helix-turn-helix domain BVD86_10235 PF04960 Glutaminase BVD86_10240 PF01327 Polypeptide deformylase BVD86_10245 PF07690 Major Facilitator Superfamily BVD86_10260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BVD86_10260 PF00205 Thiamine pyrophosphate enzyme, central domain BVD86_10260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BVD86_10265 PF00171 Aldehyde dehydrogenase family BVD86_10270 PF01958 Domain of unknown function DUF108 BVD86_10270 PF03447 Homoserine dehydrogenase, NAD binding domain BVD86_10280 PF12697 Alpha/beta hydrolase family BVD86_10290 PF07690 Major Facilitator Superfamily BVD86_10295 PF14759 Reductase C-terminal BVD86_10295 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_10300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BVD86_10310 PF00355 Rieske [2Fe-2S] domain BVD86_10320 PF00355 Rieske [2Fe-2S] domain BVD86_10325 PF01614 Bacterial transcriptional regulator BVD86_10325 PF09339 IclR helix-turn-helix domain BVD86_10340 PF00378 Enoyl-CoA hydratase/isomerase BVD86_10350 PF00535 Glycosyl transferase family 2 BVD86_10355 PF14883 Hypothetical glycosyl hydrolase family 13 BVD86_10355 PF01522 Polysaccharide deacetylase BVD86_10360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BVD86_10365 PF07152 YaeQ protein BVD86_10370 PF00375 Sodium:dicarboxylate symporter family BVD86_10385 PF03061 Thioesterase superfamily BVD86_10395 PF02028 BCCT, betaine/carnitine/choline family transporter BVD86_10400 PF02028 BCCT, betaine/carnitine/choline family transporter BVD86_10405 PF00440 Bacterial regulatory proteins, tetR family BVD86_10405 PF13977 BetI-type transcriptional repressor, C-terminal BVD86_10410 PF00171 Aldehyde dehydrogenase family BVD86_10415 PF00732 GMC oxidoreductase BVD86_10415 PF05199 GMC oxidoreductase BVD86_10420 PF06039 Malate:quinone oxidoreductase (Mqo) BVD86_10430 PF02574 Homocysteine S-methyltransferase BVD86_10435 PF13520 Amino acid permease BVD86_10460 PF01126 Heme oxygenase BVD86_10480 PF07715 TonB-dependent Receptor Plug Domain BVD86_10480 PF00593 TonB dependent receptor BVD86_10490 PF04542 Sigma-70 region 2 BVD86_10490 PF08281 Sigma-70, region 4 BVD86_10500 PF00701 Dihydrodipicolinate synthetase family BVD86_10505 PF00083 Sugar (and other) transporter BVD86_10555 PF07690 Major Facilitator Superfamily BVD86_10560 PF13533 Biotin-lipoyl like BVD86_10565 PF03061 Thioesterase superfamily BVD86_10570 PF00490 Delta-aminolevulinic acid dehydratase BVD86_10575 PF01266 FAD dependent oxidoreductase BVD86_10580 PF01370 NAD dependent epimerase/dehydratase family BVD86_10580 PF08338 Domain of unknown function (DUF1731) BVD86_10600 PF12320 Type 5 capsule protein repressor C-terminal domain BVD86_10600 PF00149 Calcineurin-like phosphoesterase BVD86_10610 PF01168 Alanine racemase, N-terminal domain BVD86_10615 PF00437 Type II/IV secretion system protein BVD86_10620 PF00437 Type II/IV secretion system protein BVD86_10625 PF01475 Ferric uptake regulator family BVD86_10630 PF04355 SmpA / OmlA family BVD86_10635 PF03658 RnfH family Ubiquitin BVD86_10650 PF01814 Hemerythrin HHE cation binding domain BVD86_10655 PF13230 Glutamine amidotransferases class-II BVD86_10665 PF00696 Amino acid kinase family BVD86_10670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BVD86_10670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BVD86_10670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BVD86_10670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BVD86_10675 PF00692 dUTPase BVD86_10680 PF13361 UvrD-like helicase C-terminal domain BVD86_10680 PF00580 UvrD/REP helicase N-terminal domain BVD86_10685 PF13488 Glycine zipper BVD86_10685 PF00691 OmpA family BVD86_10690 PF01553 Acyltransferase BVD86_10700 PF03775 Septum formation inhibitor MinC, C-terminal domain BVD86_10705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BVD86_10710 PF03776 Septum formation topological specificity factor MinE BVD86_10720 PF01810 LysE type translocator BVD86_10725 PF01580 FtsK/SpoIIIE family BVD86_10725 PF09397 Ftsk gamma domain BVD86_10725 PF17854 FtsK alpha domain BVD86_10725 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BVD86_10730 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_10735 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BVD86_10740 PF04377 Arginine-tRNA-protein transferase, C terminus BVD86_10740 PF04376 Arginine-tRNA-protein transferase, N terminus BVD86_10745 PF00583 Acetyltransferase (GNAT) family BVD86_10760 PF03144 Elongation factor Tu domain 2 BVD86_10760 PF00009 Elongation factor Tu GTP binding domain BVD86_10760 PF03143 Elongation factor Tu C-terminal domain BVD86_10765 PF00679 Elongation factor G C-terminus BVD86_10765 PF14492 Elongation Factor G, domain II BVD86_10765 PF03764 Elongation factor G, domain IV BVD86_10765 PF03144 Elongation factor Tu domain 2 BVD86_10765 PF00009 Elongation factor Tu GTP binding domain BVD86_10770 PF00177 Ribosomal protein S7p/S5e BVD86_10775 PF00164 Ribosomal protein S12/S23 BVD86_10785 PF02801 Beta-ketoacyl synthase, C-terminal domain BVD86_10785 PF00109 Beta-ketoacyl synthase, N-terminal domain BVD86_10800 PF02540 NAD synthase BVD86_10800 PF00795 Carbon-nitrogen hydrolase BVD86_10815 PF00111 2Fe-2S iron-sulfur cluster binding domain BVD86_10815 PF00970 Oxidoreductase FAD-binding domain BVD86_10815 PF00175 Oxidoreductase NAD-binding domain BVD86_10820 PF00171 Aldehyde dehydrogenase family BVD86_10825 PF00355 Rieske [2Fe-2S] domain BVD86_10825 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BVD86_10830 PF07859 alpha/beta hydrolase fold BVD86_10835 PF02028 BCCT, betaine/carnitine/choline family transporter BVD86_10840 PF00180 Isocitrate/isopropylmalate dehydrogenase BVD86_10845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_10845 PF03466 LysR substrate binding domain BVD86_10865 PF00037 4Fe-4S binding domain BVD86_10870 PF01467 Cytidylyltransferase-like BVD86_10875 PF01668 SmpB protein BVD86_10885 PF03358 NADPH-dependent FMN reductase BVD86_10895 PF01479 S4 domain BVD86_10895 PF00849 RNA pseudouridylate synthase BVD86_10900 PF13525 Outer membrane lipoprotein BVD86_10905 PF10410 DnaB-helicase binding domain of primase BVD86_10905 PF08278 DNA primase DnaG DnaB-binding BVD86_10905 PF08275 DNA primase catalytic core, N-terminal domain BVD86_10905 PF01807 CHC2 zinc finger BVD86_10915 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BVD86_10915 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BVD86_10915 PF01488 Shikimate / quinate 5-dehydrogenase BVD86_10925 PF03550 Outer membrane lipoprotein LolB BVD86_10930 PF00288 GHMP kinases N terminal domain BVD86_10930 PF08544 GHMP kinases C terminal BVD86_10955 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BVD86_10955 PF14572 Phosphoribosyl synthetase-associated domain BVD86_10960 PF01386 Ribosomal L25p family BVD86_10965 PF01195 Peptidyl-tRNA hydrolase BVD86_10970 PF02261 Aspartate decarboxylase BVD86_10985 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BVD86_10995 PF02581 Thiamine monophosphate synthase BVD86_10995 PF03070 TENA/THI-4/PQQC family BVD86_10995 PF08543 Phosphomethylpyrimidine kinase BVD86_11000 PF04972 BON domain BVD86_11000 PF01476 LysM domain BVD86_11005 PF00550 Phosphopantetheine attachment site BVD86_11015 PF00698 Acyl transferase domain BVD86_11020 PF01783 Ribosomal L32p protein family BVD86_11025 PF02620 Large ribosomal RNA subunit accumulation protein YceD BVD86_11030 PF04315 Elongation factor P hydroxylase BVD86_11035 PF01300 Telomere recombination BVD86_11040 PF02616 Segregation and condensation protein ScpA BVD86_11045 PF04079 Segregation and condensation complex subunit ScpB BVD86_11050 PF01479 S4 domain BVD86_11050 PF00849 RNA pseudouridylate synthase BVD86_11075 PF00155 Aminotransferase class I and II BVD86_11080 PF06968 Biotin and Thiamin Synthesis associated domain BVD86_11080 PF00202 Aminotransferase class-III BVD86_11080 PF04055 Radical SAM superfamily BVD86_11085 PF12697 Alpha/beta hydrolase family BVD86_11085 PF08241 Methyltransferase domain BVD86_11090 PF02358 Trehalose-phosphatase BVD86_11095 PF00982 Glycosyltransferase family 20 BVD86_11100 PF07690 Major Facilitator Superfamily BVD86_11105 PF00210 Ferritin-like domain BVD86_11110 PF03120 NAD-dependent DNA ligase OB-fold domain BVD86_11110 PF12826 Helix-hairpin-helix motif BVD86_11110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BVD86_11110 PF01653 NAD-dependent DNA ligase adenylation domain BVD86_11110 PF00533 BRCA1 C Terminus (BRCT) domain BVD86_11120 PF06470 SMC proteins Flexible Hinge Domain BVD86_11120 PF02463 RecF/RecN/SMC N terminal domain BVD86_11130 PF01925 Sulfite exporter TauE/SafE BVD86_11140 PF03309 Type III pantothenate kinase BVD86_11145 PF02881 SRP54-type protein, helical bundle domain BVD86_11145 PF00448 SRP54-type protein, GTPase domain BVD86_11145 PF02978 Signal peptide binding domain BVD86_11155 PF01207 Dihydrouridine synthase (Dus) BVD86_11190 PF00692 dUTPase BVD86_11205 PF01048 Phosphorylase superfamily BVD86_11210 PF10609 NUBPL iron-transfer P-loop NTPase BVD86_11220 PF09334 tRNA synthetases class I (M) BVD86_11220 PF01588 Putative tRNA binding domain BVD86_11250 PF13533 Biotin-lipoyl like BVD86_11255 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_11270 PF05552 Conserved TM helix BVD86_11285 PF00175 Oxidoreductase NAD-binding domain BVD86_11285 PF00970 Oxidoreductase FAD-binding domain BVD86_11290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_11290 PF03466 LysR substrate binding domain BVD86_11305 PF00361 Proton-conducting membrane transporter BVD86_11310 PF00361 Proton-conducting membrane transporter BVD86_11315 PF00361 Proton-conducting membrane transporter BVD86_11315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BVD86_11320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BVD86_11325 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BVD86_11330 PF12838 4Fe-4S dicluster domain BVD86_11335 PF00146 NADH dehydrogenase BVD86_11340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BVD86_11340 PF00384 Molybdopterin oxidoreductase BVD86_11340 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BVD86_11345 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BVD86_11345 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BVD86_11345 PF10531 SLBB domain BVD86_11355 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BVD86_11355 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BVD86_11360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BVD86_11365 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BVD86_11370 PF00990 Diguanylate cyclase, GGDEF domain BVD86_11380 PF00672 HAMP domain BVD86_11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_11380 PF00512 His Kinase A (phospho-acceptor) domain BVD86_11385 PF00486 Transcriptional regulatory protein, C terminal BVD86_11385 PF00072 Response regulator receiver domain BVD86_11390 PF00317 Ribonucleotide reductase, all-alpha domain BVD86_11390 PF02867 Ribonucleotide reductase, barrel domain BVD86_11390 PF03477 ATP cone domain BVD86_11400 PF00268 Ribonucleotide reductase, small chain BVD86_11425 PF17074 Darcynin, domain of unknown function BVD86_11460 PF01613 Flavin reductase like domain BVD86_11465 PF01717 Cobalamin-independent synthase, Catalytic domain BVD86_11465 PF08267 Cobalamin-independent synthase, N-terminal domain BVD86_11475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_11475 PF03466 LysR substrate binding domain BVD86_11480 PF01810 LysE type translocator BVD86_11490 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BVD86_11490 PF12833 Helix-turn-helix domain BVD86_11495 PF07687 Peptidase dimerisation domain BVD86_11495 PF01546 Peptidase family M20/M25/M40 BVD86_11510 PF01970 Tripartite tricarboxylate transporter TctA family BVD86_11530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_11530 PF03466 LysR substrate binding domain BVD86_11540 PF07690 Major Facilitator Superfamily BVD86_11550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_11550 PF03466 LysR substrate binding domain BVD86_11555 PF14537 Cytochrome c3 BVD86_11555 PF00890 FAD binding domain BVD86_11570 PF00440 Bacterial regulatory proteins, tetR family BVD86_11570 PF17932 Tetracyclin repressor-like, C-terminal domain BVD86_11580 PF02515 CoA-transferase family III BVD86_11585 PF07690 Major Facilitator Superfamily BVD86_11590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_11590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_11590 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_11595 PF03466 LysR substrate binding domain BVD86_11595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_11600 PF00107 Zinc-binding dehydrogenase BVD86_11600 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_11605 PF00962 Adenosine/AMP deaminase BVD86_11630 PF02445 Quinolinate synthetase A protein BVD86_11635 PF01960 ArgJ family BVD86_11640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BVD86_11640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BVD86_11645 PF00893 Small Multidrug Resistance protein BVD86_11660 PF07731 Multicopper oxidase BVD86_11660 PF00394 Multicopper oxidase BVD86_11660 PF07732 Multicopper oxidase BVD86_11675 PF00834 Ribulose-phosphate 3 epimerase family BVD86_11685 PF00756 Putative esterase BVD86_11695 PF04445 Putative SAM-dependent methyltransferase BVD86_11700 PF00814 Glycoprotease family BVD86_11705 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_11710 PF00293 NUDIX domain BVD86_11750 PF00425 chorismate binding enzyme BVD86_11750 PF04715 Anthranilate synthase component I, N terminal region BVD86_11755 PF00155 Aminotransferase class I and II BVD86_11760 PF00815 Histidinol dehydrogenase BVD86_11765 PF01634 ATP phosphoribosyltransferase BVD86_11770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BVD86_11775 PF01722 BolA-like protein BVD86_11780 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BVD86_11785 PF04552 Sigma-54, DNA binding domain BVD86_11785 PF04963 Sigma-54 factor, core binding domain BVD86_11785 PF00309 Sigma-54 factor, Activator interacting domain (AID) BVD86_11830 PF00795 Carbon-nitrogen hydrolase BVD86_11840 PF01047 MarR family BVD86_11845 PF02566 OsmC-like protein BVD86_11850 PF00437 Type II/IV secretion system protein BVD86_11870 PF01367 5'-3' exonuclease, C-terminal SAM fold BVD86_11870 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BVD86_11870 PF01612 3'-5' exonuclease BVD86_11870 PF00476 DNA polymerase family A BVD86_11875 PF02325 YGGT family BVD86_11880 PF14748 Pyrroline-5-carboxylate reductase dimerisation BVD86_11880 PF03807 NADP oxidoreductase coenzyme F420-dependent BVD86_11885 PF01171 PP-loop family BVD86_11885 PF09179 TilS substrate binding domain BVD86_11885 PF11734 TilS substrate C-terminal domain BVD86_11890 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BVD86_11895 PF02541 Ppx/GppA phosphatase family BVD86_11900 PF00085 Thioredoxin BVD86_11905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BVD86_11905 PF07497 Rho termination factor, RNA-binding domain BVD86_11905 PF07498 Rho termination factor, N-terminal domain BVD86_11920 PF00216 Bacterial DNA-binding protein BVD86_11925 PF03147 Ferredoxin-fold anticodon binding domain BVD86_11925 PF03483 B3/4 domain BVD86_11925 PF03484 tRNA synthetase B5 domain BVD86_11925 PF01588 Putative tRNA binding domain BVD86_11925 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BVD86_11930 PF01409 tRNA synthetases class II core domain (F) BVD86_11930 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BVD86_11950 PF00453 Ribosomal protein L20 BVD86_11955 PF01632 Ribosomal protein L35 BVD86_11965 PF07690 Major Facilitator Superfamily BVD86_11970 PF09335 SNARE associated Golgi protein BVD86_11975 PF00043 Glutathione S-transferase, C-terminal domain BVD86_11975 PF02798 Glutathione S-transferase, N-terminal domain BVD86_11985 PF05198 Translation initiation factor IF-3, N-terminal domain BVD86_11985 PF00707 Translation initiation factor IF-3, C-terminal domain BVD86_11990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BVD86_11990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BVD86_11990 PF03129 Anticodon binding domain BVD86_11990 PF02824 TGS domain BVD86_11995 PF13193 AMP-binding enzyme C-terminal domain BVD86_11995 PF00501 AMP-binding enzyme BVD86_12000 PF04751 Protein of unknown function (DUF615) BVD86_12005 PF00381 PTS HPr component phosphorylation site BVD86_12010 PF03668 P-loop ATPase protein family BVD86_12015 PF02569 Pantoate-beta-alanine ligase BVD86_12020 PF02548 Ketopantoate hydroxymethyltransferase BVD86_12025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BVD86_12030 PF01743 Poly A polymerase head domain BVD86_12030 PF12627 Probable RNA and SrmB- binding site of polymerase A BVD86_12030 PF12626 Polymerase A arginine-rich C-terminus BVD86_12040 PF03819 MazG nucleotide pyrophosphohydrolase domain BVD86_12045 PF00106 short chain dehydrogenase BVD86_12050 PF13291 ACT domain BVD86_12050 PF04607 Region found in RelA / SpoT proteins BVD86_12050 PF02824 TGS domain BVD86_12055 PF05958 tRNA (Uracil-5-)-methyltransferase BVD86_12065 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_12070 PF00512 His Kinase A (phospho-acceptor) domain BVD86_12070 PF00672 HAMP domain BVD86_12070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_12070 PF00072 Response regulator receiver domain BVD86_12070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BVD86_12070 PF01627 Hpt domain BVD86_12075 PF00378 Enoyl-CoA hydratase/isomerase BVD86_12080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BVD86_12080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BVD86_12085 PF01261 Xylose isomerase-like TIM barrel BVD86_12100 PF00106 short chain dehydrogenase BVD86_12105 PF02233 NAD(P) transhydrogenase beta subunit BVD86_12110 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BVD86_12115 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BVD86_12115 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BVD86_12120 PF00892 EamA-like transporter family BVD86_12130 PF07690 Major Facilitator Superfamily BVD86_12135 PF01207 Dihydrouridine synthase (Dus) BVD86_12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_12150 PF03466 LysR substrate binding domain BVD86_12160 PF00899 ThiF family BVD86_12165 PF00694 Aconitase C-terminal domain BVD86_12165 PF00330 Aconitase family (aconitate hydratase) BVD86_12170 PF01026 TatD related DNase BVD86_12185 PF00009 Elongation factor Tu GTP binding domain BVD86_12185 PF16658 Class II release factor RF3, C-terminal domain BVD86_12185 PF03144 Elongation factor Tu domain 2 BVD86_12200 PF00563 EAL domain BVD86_12200 PF00990 Diguanylate cyclase, GGDEF domain BVD86_12200 PF03707 Bacterial signalling protein N terminal repeat BVD86_12205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BVD86_12205 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BVD86_12210 PF10369 Small subunit of acetolactate synthase BVD86_12215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BVD86_12215 PF00205 Thiamine pyrophosphate enzyme, central domain BVD86_12215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BVD86_12220 PF08264 Anticodon-binding domain of tRNA BVD86_12220 PF13603 Leucyl-tRNA synthetase, Domain 2 BVD86_12220 PF09334 tRNA synthetases class I (M) BVD86_12220 PF00133 tRNA synthetases class I (I, L, M and V) BVD86_12235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BVD86_12240 PF02687 FtsX-like permease family BVD86_12240 PF00005 ABC transporter BVD86_12240 PF12704 MacB-like periplasmic core domain BVD86_12245 PF02321 Outer membrane efflux protein BVD86_12260 PF00929 Exonuclease BVD86_12265 PF03193 RsgA GTPase BVD86_12275 PF00462 Glutaredoxin BVD86_12280 PF02556 Preprotein translocase subunit SecB BVD86_12295 PF00109 Beta-ketoacyl synthase, N-terminal domain BVD86_12295 PF02801 Beta-ketoacyl synthase, C-terminal domain BVD86_12310 PF02801 Beta-ketoacyl synthase, C-terminal domain BVD86_12310 PF00109 Beta-ketoacyl synthase, N-terminal domain BVD86_12320 PF04820 Tryptophan halogenase BVD86_12340 PF00221 Aromatic amino acid lyase BVD86_12355 PF00501 AMP-binding enzyme BVD86_12355 PF13193 AMP-binding enzyme C-terminal domain BVD86_12365 PF00550 Phosphopantetheine attachment site BVD86_12370 PF00550 Phosphopantetheine attachment site BVD86_12385 PF01926 50S ribosome-binding GTPase BVD86_12385 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BVD86_12390 PF13360 PQQ-like domain BVD86_12390 PF01011 PQQ enzyme repeat BVD86_12400 PF13393 Histidyl-tRNA synthetase BVD86_12400 PF03129 Anticodon binding domain BVD86_12405 PF04551 GcpE protein BVD86_12410 PF13464 Domain of unknown function (DUF4115) BVD86_12420 PF04055 Radical SAM superfamily BVD86_12425 PF00334 Nucleoside diphosphate kinase BVD86_12430 PF04384 Iron-sulphur cluster assembly BVD86_12435 PF01569 PAP2 superfamily BVD86_12440 PF00534 Glycosyl transferases group 1 BVD86_12440 PF13439 Glycosyltransferase Family 4 BVD86_12445 PF03572 Peptidase family S41 BVD86_12445 PF17804 Tail specific protease N-terminal domain BVD86_12445 PF11818 C-terminal domain of tail specific protease (DUF3340) BVD86_12445 PF00595 PDZ domain BVD86_12450 PF00933 Glycosyl hydrolase family 3 N terminal domain BVD86_12460 PF00561 alpha/beta hydrolase fold BVD86_12465 PF00171 Aldehyde dehydrogenase family BVD86_12470 PF00171 Aldehyde dehydrogenase family BVD86_12475 PF01202 Shikimate kinase BVD86_12480 PF02447 GntP family permease BVD86_12485 PF01081 KDPG and KHG aldolase BVD86_12490 PF00920 Dehydratase family BVD86_12500 PF00871 Acetokinase family BVD86_12505 PF01515 Phosphate acetyl/butaryl transferase BVD86_12505 PF07085 DRTGG domain BVD86_12510 PF05683 Fumarase C-terminus BVD86_12510 PF05681 Fumarate hydratase (Fumerase) BVD86_12525 PF06689 ClpX C4-type zinc finger BVD86_12525 PF10431 C-terminal, D2-small domain, of ClpB protein BVD86_12525 PF07724 AAA domain (Cdc48 subfamily) BVD86_12530 PF00574 Clp protease BVD86_12535 PF05698 Bacterial trigger factor protein (TF) C-terminus BVD86_12535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BVD86_12535 PF05697 Bacterial trigger factor protein (TF) BVD86_12540 PF07715 TonB-dependent Receptor Plug Domain BVD86_12540 PF00593 TonB dependent receptor BVD86_12545 PF18331 PKHD-type hydroxylase C-terminal domain BVD86_12545 PF13640 2OG-Fe(II) oxygenase superfamily BVD86_12550 PF00682 HMGL-like BVD86_12550 PF08502 LeuA allosteric (dimerisation) domain BVD86_12555 PF00561 alpha/beta hydrolase fold BVD86_12560 PF00561 alpha/beta hydrolase fold BVD86_12560 PF07021 Methionine biosynthesis protein MetW BVD86_12570 PF01725 Ham1 family BVD86_12580 PF02416 mttA/Hcf106 family BVD86_12585 PF02416 mttA/Hcf106 family BVD86_12590 PF00902 Sec-independent protein translocase protein (TatC) BVD86_12610 PF01790 Prolipoprotein diacylglyceryl transferase BVD86_12625 PF00303 Thymidylate synthase BVD86_12630 PF00186 Dihydrofolate reductase BVD86_12640 PF01625 Peptide methionine sulfoxide reductase BVD86_12650 PF01618 MotA/TolQ/ExbB proton channel family BVD86_12660 PF01842 ACT domain BVD86_12660 PF00551 Formyl transferase BVD86_12670 PF00171 Aldehyde dehydrogenase family BVD86_12675 PF00830 Ribosomal L28 family BVD86_12680 PF00471 Ribosomal protein L33 BVD86_12685 PF02254 TrkA-N domain BVD86_12685 PF00999 Sodium/hydrogen exchanger family BVD86_12705 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BVD86_12710 PF00580 UvrD/REP helicase N-terminal domain BVD86_12710 PF13361 UvrD-like helicase C-terminal domain BVD86_12725 PF08272 Topoisomerase I zinc-ribbon-like BVD86_12725 PF01131 DNA topoisomerase BVD86_12725 PF01396 Topoisomerase DNA binding C4 zinc finger BVD86_12725 PF01751 Toprim domain BVD86_12735 PF01638 HxlR-like helix-turn-helix BVD86_12740 PF00107 Zinc-binding dehydrogenase BVD86_12740 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_12745 PF04102 SlyX BVD86_12760 PF03279 Bacterial lipid A biosynthesis acyltransferase BVD86_12770 PF00375 Sodium:dicarboxylate symporter family BVD86_12780 PF01118 Semialdehyde dehydrogenase, NAD binding domain BVD86_12780 PF02774 Semialdehyde dehydrogenase, dimerisation domain BVD86_12800 PF01416 tRNA pseudouridine synthase BVD86_12810 PF01176 Translation initiation factor 1A / IF-1 BVD86_12825 PF00180 Isocitrate/isopropylmalate dehydrogenase BVD86_12835 PF00694 Aconitase C-terminal domain BVD86_12840 PF00330 Aconitase family (aconitate hydratase) BVD86_12850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_12850 PF03466 LysR substrate binding domain BVD86_12875 PF00293 NUDIX domain BVD86_12880 PF05524 PEP-utilising enzyme, N-terminal BVD86_12880 PF00391 PEP-utilising enzyme, mobile domain BVD86_12880 PF02896 PEP-utilising enzyme, TIM barrel domain BVD86_12880 PF01590 GAF domain BVD86_12885 PF00141 Peroxidase BVD86_12890 PF12706 Beta-lactamase superfamily domain BVD86_12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_12895 PF03466 LysR substrate binding domain BVD86_12905 PF02798 Glutathione S-transferase, N-terminal domain BVD86_12910 PF08279 HTH domain BVD86_12910 PF13280 WYL domain BVD86_12915 PF13419 Haloacid dehalogenase-like hydrolase BVD86_12920 PF01479 S4 domain BVD86_12920 PF00849 RNA pseudouridylate synthase BVD86_12930 PF12111 Polyribonucleotide phosphorylase C terminal BVD86_12930 PF00575 S1 RNA binding domain BVD86_12930 PF10150 Ribonuclease E/G family BVD86_12935 PF00501 AMP-binding enzyme BVD86_12935 PF13193 AMP-binding enzyme C-terminal domain BVD86_12950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_12950 PF03466 LysR substrate binding domain BVD86_12960 PF04055 Radical SAM superfamily BVD86_12960 PF06969 HemN C-terminal domain BVD86_12970 PF01554 MatE BVD86_12975 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BVD86_12975 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_12975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_12980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_12980 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BVD86_12985 PF03109 ABC1 family BVD86_12990 PF01197 Ribosomal protein L31 BVD86_13005 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BVD86_13015 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_13015 PF13247 4Fe-4S dicluster domain BVD86_13015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BVD86_13025 PF03884 DNA gyrase inhibitor YacG BVD86_13030 PF00753 Metallo-beta-lactamase superfamily BVD86_13035 PF00762 Ferrochelatase BVD86_13045 PF01177 Asp/Glu/Hydantoin racemase BVD86_13060 PF01206 Sulfurtransferase TusA BVD86_13065 PF00571 CBS domain BVD86_13065 PF03471 Transporter associated domain BVD86_13070 PF00795 Carbon-nitrogen hydrolase BVD86_13075 PF01588 Putative tRNA binding domain BVD86_13085 PF08334 Type II secretion system (T2SS), protein G BVD86_13085 PF07963 Prokaryotic N-terminal methylation motif BVD86_13090 PF00482 Type II secretion system (T2SS), protein F BVD86_13095 PF00271 Helicase conserved C-terminal domain BVD86_13095 PF18074 Primosomal protein N C-terminal domain BVD86_13095 PF00270 DEAD/DEAH box helicase BVD86_13095 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BVD86_13095 PF17764 3′ DNA-binding domain (3′BD) BVD86_13100 PF00999 Sodium/hydrogen exchanger family BVD86_13100 PF02254 TrkA-N domain BVD86_13105 PF01430 Hsp33 protein BVD86_13115 PF01556 DnaJ C terminal domain BVD86_13115 PF00226 DnaJ domain BVD86_13125 PF01544 CorA-like Mg2+ transporter protein BVD86_13130 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BVD86_13130 PF00013 KH domain BVD86_13130 PF01138 3' exoribonuclease family, domain 1 BVD86_13130 PF03725 3' exoribonuclease family, domain 2 BVD86_13130 PF00575 S1 RNA binding domain BVD86_13135 PF00312 Ribosomal protein S15 BVD86_13145 PF13538 UvrD-like helicase C-terminal domain BVD86_13150 PF13361 UvrD-like helicase C-terminal domain BVD86_13150 PF00580 UvrD/REP helicase N-terminal domain BVD86_13150 PF12705 PD-(D/E)XK nuclease superfamily BVD86_13155 PF17946 RecC C-terminal domain BVD86_13165 PF03976 Polyphosphate kinase 2 (PPK2) BVD86_13175 PF01209 ubiE/COQ5 methyltransferase family BVD86_13185 PF03109 ABC1 family BVD86_13190 PF01494 FAD binding domain BVD86_13195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BVD86_13200 PF01502 Phosphoribosyl-AMP cyclohydrolase BVD86_13215 PF00361 Proton-conducting membrane transporter BVD86_13215 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BVD86_13215 PF13244 Domain of unknown function (DUF4040) BVD86_13215 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BVD86_13220 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BVD86_13225 PF00361 Proton-conducting membrane transporter BVD86_13235 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BVD86_13245 PF02033 Ribosome-binding factor A BVD86_13250 PF08364 Bacterial translation initiation factor IF-2 associated region BVD86_13250 PF11987 Translation-initiation factor 2 BVD86_13250 PF04760 Translation initiation factor IF-2, N-terminal region BVD86_13250 PF00009 Elongation factor Tu GTP binding domain BVD86_13255 PF08529 NusA N-terminal domain BVD86_13255 PF13184 NusA-like KH domain BVD86_13255 PF00575 S1 RNA binding domain BVD86_13260 PF17384 RimP C-terminal SH3 domain BVD86_13260 PF02576 RimP N-terminal domain BVD86_13280 PF03840 Preprotein translocase SecG subunit BVD86_13285 PF00121 Triosephosphate isomerase BVD86_13290 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BVD86_13290 PF00437 Type II/IV secretion system protein BVD86_13295 PF00482 Type II secretion system (T2SS), protein F BVD86_13300 PF06750 Bacterial Peptidase A24 N-terminal domain BVD86_13300 PF01478 Type IV leader peptidase family BVD86_13305 PF01121 Dephospho-CoA kinase BVD86_13315 PF00588 SpoU rRNA Methylase family BVD86_13315 PF08032 RNA 2'-O ribose methyltransferase substrate binding BVD86_13320 PF06865 Pyrimidine/purine nucleoside phosphorylase BVD86_13330 PF02463 RecF/RecN/SMC N terminal domain BVD86_13335 PF02622 Uncharacterized ACR, COG1678 BVD86_13340 PF03652 Holliday junction resolvase BVD86_13345 PF13533 Biotin-lipoyl like BVD86_13375 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BVD86_13375 PF12833 Helix-turn-helix domain BVD86_13375 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BVD86_13375 PF02805 Metal binding domain of Ada BVD86_13380 PF01066 CDP-alcohol phosphatidyltransferase BVD86_13390 PF08459 UvrC Helix-hairpin-helix N-terminal BVD86_13390 PF02151 UvrB/uvrC motif BVD86_13390 PF01541 GIY-YIG catalytic domain BVD86_13410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BVD86_13410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BVD86_13410 PF00378 Enoyl-CoA hydratase/isomerase BVD86_13415 PF02803 Thiolase, C-terminal domain BVD86_13415 PF00108 Thiolase, N-terminal domain BVD86_13430 PF00376 MerR family regulatory protein BVD86_13430 PF09278 MerR, DNA binding BVD86_13440 PF01323 DSBA-like thioredoxin domain BVD86_13455 PF00183 Hsp90 protein BVD86_13455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_13470 PF13726 Na+-H+ antiporter family BVD86_13470 PF03553 Na+/H+ antiporter family BVD86_13495 PF04998 RNA polymerase Rpb1, domain 5 BVD86_13495 PF04997 RNA polymerase Rpb1, domain 1 BVD86_13495 PF05000 RNA polymerase Rpb1, domain 4 BVD86_13495 PF04983 RNA polymerase Rpb1, domain 3 BVD86_13495 PF00623 RNA polymerase Rpb1, domain 2 BVD86_13500 PF04565 RNA polymerase Rpb2, domain 3 BVD86_13500 PF04561 RNA polymerase Rpb2, domain 2 BVD86_13500 PF04560 RNA polymerase Rpb2, domain 7 BVD86_13500 PF00562 RNA polymerase Rpb2, domain 6 BVD86_13500 PF10385 RNA polymerase beta subunit external 1 domain BVD86_13500 PF04563 RNA polymerase beta subunit BVD86_13505 PF00542 Ribosomal protein L7/L12 C-terminal domain BVD86_13505 PF16320 Ribosomal protein L7/L12 dimerisation domain BVD86_13510 PF00466 Ribosomal protein L10 BVD86_13515 PF00687 Ribosomal protein L1p/L10e family BVD86_13520 PF00298 Ribosomal protein L11, RNA binding domain BVD86_13520 PF03946 Ribosomal protein L11, N-terminal domain BVD86_13525 PF00467 KOW motif BVD86_13525 PF02357 Transcription termination factor nusG BVD86_13530 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BVD86_13540 PF03144 Elongation factor Tu domain 2 BVD86_13540 PF00009 Elongation factor Tu GTP binding domain BVD86_13540 PF03143 Elongation factor Tu C-terminal domain BVD86_13565 PF04715 Anthranilate synthase component I, N terminal region BVD86_13565 PF00425 chorismate binding enzyme BVD86_13570 PF13419 Haloacid dehalogenase-like hydrolase BVD86_13575 PF00498 FHA domain BVD86_13575 PF12401 Protein of unknown function (DUF2662) BVD86_13580 PF03958 Bacterial type II/III secretion system short domain BVD86_13580 PF00263 Bacterial type II and III secretion system protein BVD86_13595 PF00816 H-NS histone family BVD86_13620 PF03900 Porphobilinogen deaminase, C-terminal domain BVD86_13620 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BVD86_13625 PF04397 LytTr DNA-binding domain BVD86_13625 PF00072 Response regulator receiver domain BVD86_13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_13630 PF06580 Histidine kinase BVD86_13630 PF07694 5TMR of 5TMR-LYT BVD86_13635 PF00206 Lyase BVD86_13635 PF14698 Argininosuccinate lyase C-terminal BVD86_13640 PF04362 Bacterial Fe(2+) trafficking BVD86_13645 PF01895 PhoU domain BVD86_13650 PF02321 Outer membrane efflux protein BVD86_13660 PF00892 EamA-like transporter family BVD86_13675 PF13667 ThiC-associated domain BVD86_13675 PF01964 Radical SAM ThiC family BVD86_13680 PF00293 NUDIX domain BVD86_13685 PF00149 Calcineurin-like phosphoesterase BVD86_13690 PF01258 Prokaryotic dksA/traR C4-type zinc finger BVD86_13695 PF00749 tRNA synthetases class I (E and Q), catalytic domain BVD86_13700 PF01098 Cell cycle protein BVD86_13705 PF08245 Mur ligase middle domain BVD86_13705 PF02875 Mur ligase family, glutamate ligase domain BVD86_13715 PF07670 Nucleoside recognition BVD86_13715 PF02421 Ferrous iron transport protein B BVD86_13715 PF07664 Ferrous iron transport protein B C terminus BVD86_13725 PF02899 Phage integrase, N-terminal SAM-like domain BVD86_13725 PF00589 Phage integrase family BVD86_13730 PF13098 Thioredoxin-like domain BVD86_13730 PF10411 Disulfide bond isomerase protein N-terminus BVD86_13735 PF03447 Homoserine dehydrogenase, NAD binding domain BVD86_13735 PF00742 Homoserine dehydrogenase BVD86_13735 PF01842 ACT domain BVD86_13740 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_13745 PF00768 D-alanyl-D-alanine carboxypeptidase BVD86_13750 PF00196 Bacterial regulatory proteins, luxR family BVD86_13750 PF00072 Response regulator receiver domain BVD86_13755 PF00512 His Kinase A (phospho-acceptor) domain BVD86_13755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_13760 PF02954 Bacterial regulatory protein, Fis family BVD86_13760 PF00072 Response regulator receiver domain BVD86_13760 PF00158 Sigma-54 interaction domain BVD86_13765 PF00595 PDZ domain BVD86_13765 PF03572 Peptidase family S41 BVD86_13770 PF01676 Metalloenzyme superfamily BVD86_13770 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BVD86_13775 PF03739 Lipopolysaccharide export system permease LptF/LptG BVD86_13785 PF00883 Cytosol aminopeptidase family, catalytic domain BVD86_13785 PF02789 Cytosol aminopeptidase family, N-terminal domain BVD86_13805 PF00677 Lumazine binding domain BVD86_13815 PF01872 RibD C-terminal domain BVD86_13815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BVD86_13820 PF03477 ATP cone domain BVD86_13825 PF00909 Ammonium Transporter Family BVD86_13830 PF00543 Nitrogen regulatory protein P-II BVD86_13840 PF13335 Magnesium chelatase, subunit ChlI C-terminal BVD86_13840 PF01078 Magnesium chelatase, subunit ChlI BVD86_13845 PF00155 Aminotransferase class I and II BVD86_13845 PF00392 Bacterial regulatory proteins, gntR family BVD86_13850 PF00596 Class II Aldolase and Adducin N-terminal domain BVD86_13855 PF00701 Dihydrodipicolinate synthetase family BVD86_13870 PF03573 outer membrane porin, OprD family BVD86_13875 PF00719 Inorganic pyrophosphatase BVD86_13890 PF00501 AMP-binding enzyme BVD86_13890 PF13193 AMP-binding enzyme C-terminal domain BVD86_13895 PF03989 DNA gyrase C-terminal domain, beta-propeller BVD86_13895 PF00521 DNA gyrase/topoisomerase IV, subunit A BVD86_13900 PF07690 Major Facilitator Superfamily BVD86_13905 PF03458 UPF0126 domain BVD86_13910 PF02810 SEC-C motif BVD86_13915 PF03471 Transporter associated domain BVD86_13915 PF03741 Integral membrane protein TerC family BVD86_13920 PF03641 Possible lysine decarboxylase BVD86_13925 PF07690 Major Facilitator Superfamily BVD86_13930 PF01183 Glycosyl hydrolases family 25 BVD86_13935 PF00817 impB/mucB/samB family BVD86_13935 PF11798 IMS family HHH motif BVD86_13935 PF11799 impB/mucB/samB family C-terminal domain BVD86_13955 PF04055 Radical SAM superfamily BVD86_13955 PF11842 Domain of unknown function (DUF3362) BVD86_13955 PF08497 Radical SAM N-terminal BVD86_13975 PF03358 NADPH-dependent FMN reductase BVD86_13990 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_14045 PF01327 Polypeptide deformylase BVD86_14055 PF17782 DprA winged helix domain BVD86_14055 PF02481 DNA recombination-mediator protein A BVD86_14060 PF01300 Telomere recombination BVD86_14065 PF00892 EamA-like transporter family BVD86_14070 PF00440 Bacterial regulatory proteins, tetR family BVD86_14075 PF07690 Major Facilitator Superfamily BVD86_14085 PF00255 Glutathione peroxidase BVD86_14095 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BVD86_14100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BVD86_14100 PF02874 ATP synthase alpha/beta family, beta-barrel domain BVD86_14105 PF00231 ATP synthase BVD86_14110 PF02874 ATP synthase alpha/beta family, beta-barrel domain BVD86_14110 PF00306 ATP synthase alpha/beta chain, C terminal domain BVD86_14110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BVD86_14115 PF00213 ATP synthase delta (OSCP) subunit BVD86_14120 PF00430 ATP synthase B/B' CF(0) BVD86_14125 PF00137 ATP synthase subunit C BVD86_14130 PF00119 ATP synthase A chain BVD86_14150 PF00005 ABC transporter BVD86_14155 PF00950 ABC 3 transport family BVD86_14160 PF01810 LysE type translocator BVD86_14165 PF04261 Dyp-type peroxidase family BVD86_14170 PF00390 Malic enzyme, N-terminal domain BVD86_14170 PF03949 Malic enzyme, NAD binding domain BVD86_14180 PF05746 DALR anticodon binding domain BVD86_14180 PF00750 tRNA synthetases class I (R) BVD86_14180 PF03485 Arginyl tRNA synthetase N terminal domain BVD86_14200 PF02678 Pirin BVD86_14200 PF05726 Pirin C-terminal cupin domain BVD86_14210 PF03551 Transcriptional regulator PadR-like family BVD86_14215 PF13302 Acetyltransferase (GNAT) domain BVD86_14220 PF00117 Glutamine amidotransferase class-I BVD86_14220 PF00958 GMP synthase C terminal domain BVD86_14220 PF02540 NAD synthase BVD86_14225 PF04286 Protein of unknown function (DUF445) BVD86_14230 PF07681 DoxX BVD86_14235 PF09335 SNARE associated Golgi protein BVD86_14250 PF13614 AAA domain BVD86_14260 PF01722 BolA-like protein BVD86_14275 PF01648 4'-phosphopantetheinyl transferase superfamily BVD86_14280 PF16363 GDP-mannose 4,6 dehydratase BVD86_14295 PF00975 Thioesterase domain BVD86_14295 PF13193 AMP-binding enzyme C-terminal domain BVD86_14295 PF00668 Condensation domain BVD86_14295 PF00550 Phosphopantetheine attachment site BVD86_14295 PF00501 AMP-binding enzyme BVD86_14300 PF00501 AMP-binding enzyme BVD86_14300 PF00109 Beta-ketoacyl synthase, N-terminal domain BVD86_14300 PF14765 Polyketide synthase dehydratase BVD86_14300 PF00550 Phosphopantetheine attachment site BVD86_14300 PF08659 KR domain BVD86_14300 PF02801 Beta-ketoacyl synthase, C-terminal domain BVD86_14300 PF13193 AMP-binding enzyme C-terminal domain BVD86_14300 PF00668 Condensation domain BVD86_14300 PF16197 Ketoacyl-synthetase C-terminal extension BVD86_14305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_14305 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_14305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_14310 PF00501 AMP-binding enzyme BVD86_14315 PF03472 Autoinducer binding domain BVD86_14315 PF00196 Bacterial regulatory proteins, luxR family BVD86_14325 PF00765 Autoinducer synthase BVD86_14330 PF07690 Major Facilitator Superfamily BVD86_14330 PF00083 Sugar (and other) transporter BVD86_14335 PF00378 Enoyl-CoA hydratase/isomerase BVD86_14340 PF00378 Enoyl-CoA hydratase/isomerase BVD86_14345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_14345 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_14345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_14350 PF13193 AMP-binding enzyme C-terminal domain BVD86_14350 PF00501 AMP-binding enzyme BVD86_14355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BVD86_14355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BVD86_14360 PF00171 Aldehyde dehydrogenase family BVD86_14370 PF00324 Amino acid permease BVD86_14375 PF00324 Amino acid permease BVD86_14380 PF01042 Endoribonuclease L-PSP BVD86_14385 PF01168 Alanine racemase, N-terminal domain BVD86_14385 PF00842 Alanine racemase, C-terminal domain BVD86_14390 PF01266 FAD dependent oxidoreductase BVD86_14395 PF01037 Lrp/AsnC ligand binding domain BVD86_14405 PF00593 TonB dependent receptor BVD86_14405 PF07715 TonB-dependent Receptor Plug Domain BVD86_14420 PF00849 RNA pseudouridylate synthase BVD86_14440 PF08361 MAATS-type transcriptional repressor, C-terminal region BVD86_14440 PF00440 Bacterial regulatory proteins, tetR family BVD86_14450 PF00109 Beta-ketoacyl synthase, N-terminal domain BVD86_14450 PF02801 Beta-ketoacyl synthase, C-terminal domain BVD86_14460 PF00293 NUDIX domain BVD86_14480 PF00694 Aconitase C-terminal domain BVD86_14480 PF00330 Aconitase family (aconitate hydratase) BVD86_14485 PF00285 Citrate synthase, C-terminal domain BVD86_14495 PF07729 FCD domain BVD86_14495 PF00392 Bacterial regulatory proteins, gntR family BVD86_14505 PF00155 Aminotransferase class I and II BVD86_14510 PF01565 FAD binding domain BVD86_14510 PF09330 D-lactate dehydrogenase, membrane binding BVD86_14515 PF01070 FMN-dependent dehydrogenase BVD86_14520 PF00392 Bacterial regulatory proteins, gntR family BVD86_14520 PF07729 FCD domain BVD86_14525 PF02652 L-lactate permease BVD86_14530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BVD86_14530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BVD86_14530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BVD86_14530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BVD86_14535 PF16363 GDP-mannose 4,6 dehydratase BVD86_14540 PF00342 Phosphoglucose isomerase BVD86_14545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BVD86_14545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BVD86_14545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BVD86_14550 PF00483 Nucleotidyl transferase BVD86_14555 PF02719 Polysaccharide biosynthesis protein BVD86_14560 PF17836 PglD N-terminal domain BVD86_14560 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_14565 PF00953 Glycosyl transferase family 4 BVD86_14565 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BVD86_14570 PF01370 NAD dependent epimerase/dehydratase family BVD86_14575 PF13579 Glycosyl transferase 4-like domain BVD86_14580 PF02350 UDP-N-acetylglucosamine 2-epimerase BVD86_14585 PF01370 NAD dependent epimerase/dehydratase family BVD86_14590 PF02719 Polysaccharide biosynthesis protein BVD86_14590 PF08485 Polysaccharide biosynthesis protein C-terminal BVD86_14610 PF14602 Hexapeptide repeat of succinyl-transferase BVD86_14610 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_14610 PF12464 Maltose acetyltransferase BVD86_14615 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BVD86_14615 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BVD86_14615 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BVD86_14620 PF02350 UDP-N-acetylglucosamine 2-epimerase BVD86_14625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BVD86_14625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BVD86_14625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BVD86_14630 PF02563 Polysaccharide biosynthesis/export protein BVD86_14630 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BVD86_14630 PF10531 SLBB domain BVD86_14635 PF01451 Low molecular weight phosphotyrosine protein phosphatase BVD86_14640 PF13614 AAA domain BVD86_14640 PF13807 G-rich domain on putative tyrosine kinase BVD86_14640 PF02706 Chain length determinant protein BVD86_14645 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BVD86_14645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BVD86_14650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BVD86_14650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BVD86_14655 PF03023 Lipid II flippase MurJ BVD86_14660 PF01510 N-acetylmuramoyl-L-alanine amidase BVD86_14665 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BVD86_14665 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BVD86_14675 PF05506 Domain of unknown function (DUF756) BVD86_14675 PF04185 Phosphoesterase family BVD86_14685 PF01138 3' exoribonuclease family, domain 1 BVD86_14685 PF03725 3' exoribonuclease family, domain 2 BVD86_14690 PF00487 Fatty acid desaturase BVD86_14695 PF00175 Oxidoreductase NAD-binding domain BVD86_14700 PF00440 Bacterial regulatory proteins, tetR family BVD86_14705 PF08360 QacR-like protein, C-terminal region BVD86_14705 PF00440 Bacterial regulatory proteins, tetR family BVD86_14710 PF01323 DSBA-like thioredoxin domain BVD86_14720 PF13419 Haloacid dehalogenase-like hydrolase BVD86_14725 PF00106 short chain dehydrogenase BVD86_14740 PF00583 Acetyltransferase (GNAT) family BVD86_14740 PF00696 Amino acid kinase family BVD86_14745 PF09084 NMT1/THI5 like BVD86_14750 PF09084 NMT1/THI5 like BVD86_14755 PF00296 Luciferase-like monooxygenase BVD86_14760 PF00528 Binding-protein-dependent transport system inner membrane component BVD86_14765 PF00005 ABC transporter BVD86_14770 PF00440 Bacterial regulatory proteins, tetR family BVD86_14770 PF08362 YcdC-like protein, C-terminal region BVD86_14775 PF01048 Phosphorylase superfamily BVD86_14785 PF06574 FAD synthetase BVD86_14785 PF01687 Riboflavin kinase BVD86_14790 PF06827 Zinc finger found in FPG and IleRS BVD86_14790 PF08264 Anticodon-binding domain of tRNA BVD86_14790 PF00133 tRNA synthetases class I (I, L, M and V) BVD86_14795 PF01252 Signal peptidase (SPase) II BVD86_14800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BVD86_14840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BVD86_14845 PF07859 alpha/beta hydrolase fold BVD86_14870 PF01025 GrpE BVD86_14875 PF00012 Hsp70 protein BVD86_14905 PF13406 Transglycosylase SLT domain BVD86_14910 PF02222 ATP-grasp domain BVD86_14910 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BVD86_14915 PF00731 AIR carboxylase BVD86_14925 PF08245 Mur ligase middle domain BVD86_14925 PF02875 Mur ligase family, glutamate ligase domain BVD86_14925 PF01225 Mur ligase family, catalytic domain BVD86_14935 PF01569 PAP2 superfamily BVD86_14940 PF03741 Integral membrane protein TerC family BVD86_14950 PF03738 Glutathionylspermidine synthase preATP-grasp BVD86_14955 PF00355 Rieske [2Fe-2S] domain BVD86_14960 PF01979 Amidohydrolase family BVD86_14965 PF00156 Phosphoribosyl transferase domain BVD86_14975 PF13098 Thioredoxin-like domain BVD86_14975 PF10411 Disulfide bond isomerase protein N-terminus BVD86_14980 PF01545 Cation efflux family BVD86_14980 PF16916 Dimerisation domain of Zinc Transporter BVD86_14985 PF02583 Metal-sensitive transcriptional repressor BVD86_14990 PF10396 GTP-binding protein TrmE N-terminus BVD86_14990 PF12631 MnmE helical domain BVD86_14990 PF01926 50S ribosome-binding GTPase BVD86_14995 PF02096 60Kd inner membrane protein BVD86_14995 PF14849 YidC periplasmic domain BVD86_15000 PF01809 Putative membrane protein insertion efficiency factor BVD86_15005 PF00825 Ribonuclease P BVD86_15010 PF00468 Ribosomal protein L34 BVD86_15015 PF00308 Bacterial dnaA protein BVD86_15015 PF11638 DnaA N-terminal domain BVD86_15015 PF08299 Bacterial dnaA protein helix-turn-helix BVD86_15020 PF02767 DNA polymerase III beta subunit, central domain BVD86_15020 PF00712 DNA polymerase III beta subunit, N-terminal domain BVD86_15020 PF02768 DNA polymerase III beta subunit, C-terminal domain BVD86_15025 PF02463 RecF/RecN/SMC N terminal domain BVD86_15030 PF01751 Toprim domain BVD86_15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_15030 PF00986 DNA gyrase B subunit, carboxyl terminus BVD86_15030 PF00204 DNA gyrase B BVD86_15030 PF18053 DNA gyrase B subunit insert domain BVD86_15045 PF00005 ABC transporter BVD86_15045 PF12848 ABC transporter BVD86_15070 PF01521 Iron-sulphur cluster biosynthesis BVD86_15075 PF00561 alpha/beta hydrolase fold BVD86_15080 PF03702 Anhydro-N-acetylmuramic acid kinase BVD86_15085 PF00579 tRNA synthetases class I (W and Y) BVD86_15120 PF02798 Glutathione S-transferase, N-terminal domain BVD86_15130 PF00209 Sodium:neurotransmitter symporter family BVD86_15140 PF01029 NusB family BVD86_15140 PF01189 16S rRNA methyltransferase RsmB/F BVD86_15145 PF00551 Formyl transferase BVD86_15145 PF02911 Formyl transferase, C-terminal domain BVD86_15150 PF00920 Dehydratase family BVD86_15165 PF03466 LysR substrate binding domain BVD86_15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_15170 PF00860 Permease family BVD86_15175 PF00311 Phosphoenolpyruvate carboxylase BVD86_15180 PF08361 MAATS-type transcriptional repressor, C-terminal region BVD86_15180 PF00440 Bacterial regulatory proteins, tetR family BVD86_15185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BVD86_15190 PF00873 AcrB/AcrD/AcrF family BVD86_15200 PF00684 DnaJ central domain BVD86_15200 PF00226 DnaJ domain BVD86_15200 PF01556 DnaJ C terminal domain BVD86_15210 PF01113 Dihydrodipicolinate reductase, N-terminus BVD86_15210 PF05173 Dihydrodipicolinate reductase, C-terminus BVD86_15220 PF07690 Major Facilitator Superfamily BVD86_15225 PF00248 Aldo/keto reductase family BVD86_15230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_15230 PF03466 LysR substrate binding domain BVD86_15245 PF00155 Aminotransferase class I and II BVD86_15245 PF00392 Bacterial regulatory proteins, gntR family BVD86_15250 PF00107 Zinc-binding dehydrogenase BVD86_15250 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_15255 PF03352 Methyladenine glycosylase BVD86_15270 PF10576 Iron-sulfur binding domain of endonuclease III BVD86_15270 PF00633 Helix-hairpin-helix motif BVD86_15270 PF14815 NUDIX domain BVD86_15270 PF00730 HhH-GPD superfamily base excision DNA repair protein BVD86_15285 PF07043 Protein of unknown function (DUF1328) BVD86_15290 PF03692 Putative zinc- or iron-chelating domain BVD86_15295 PF07995 Glucose / Sorbosone dehydrogenase BVD86_15300 PF16193 AAA C-terminal domain BVD86_15300 PF12002 MgsA AAA+ ATPase C terminal BVD86_15300 PF00004 ATPase family associated with various cellular activities (AAA) BVD86_15305 PF01226 Formate/nitrite transporter BVD86_15315 PF01259 SAICAR synthetase BVD86_15325 PF00701 Dihydrodipicolinate synthetase family BVD86_15330 PF00857 Isochorismatase family BVD86_15335 PF01758 Sodium Bile acid symporter family BVD86_15340 PF01554 MatE BVD86_15345 PF04463 Protein of unknown function (DUF523) BVD86_15350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BVD86_15360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BVD86_15365 PF14497 Glutathione S-transferase, C-terminal domain BVD86_15365 PF02798 Glutathione S-transferase, N-terminal domain BVD86_15375 PF00324 Amino acid permease BVD86_15385 PF02492 CobW/HypB/UreG, nucleotide-binding domain BVD86_15385 PF07683 Cobalamin synthesis protein cobW C-terminal domain BVD86_15395 PF00392 Bacterial regulatory proteins, gntR family BVD86_15395 PF07702 UTRA domain BVD86_15400 PF05962 HutD BVD86_15405 PF17391 Urocanase N-terminal domain BVD86_15405 PF17392 Urocanase C-terminal domain BVD86_15405 PF01175 Urocanase Rossmann-like domain BVD86_15410 PF00221 Aromatic amino acid lyase BVD86_15415 PF00324 Amino acid permease BVD86_15420 PF01979 Amidohydrolase family BVD86_15425 PF00491 Arginase family BVD86_15435 PF13419 Haloacid dehalogenase-like hydrolase BVD86_15440 PF01177 Asp/Glu/Hydantoin racemase BVD86_15450 PF01380 SIS domain BVD86_15455 PF12804 MobA-like NTP transferase domain BVD86_15455 PF14602 Hexapeptide repeat of succinyl-transferase BVD86_15455 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_15460 PF04608 Phosphatidylglycerophosphatase A BVD86_15465 PF00586 AIR synthase related protein, N-terminal domain BVD86_15465 PF02769 AIR synthase related protein, C-terminal domain BVD86_15470 PF01029 NusB family BVD86_15475 PF00885 6,7-dimethyl-8-ribityllumazine synthase BVD86_15480 PF00925 GTP cyclohydrolase II BVD86_15480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BVD86_15510 PF02580 D-Tyr-tRNA(Tyr) deacylase BVD86_15515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BVD86_15515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BVD86_15520 PF00581 Rhodanese-like domain BVD86_15525 PF02666 Phosphatidylserine decarboxylase BVD86_15530 PF03069 Acetamidase/Formamidase family BVD86_15550 PF11808 Phosphate regulon sensor protein PhoR BVD86_15550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_15550 PF00989 PAS fold BVD86_15550 PF00512 His Kinase A (phospho-acceptor) domain BVD86_15555 PF00486 Transcriptional regulatory protein, C terminal BVD86_15555 PF00072 Response regulator receiver domain BVD86_15565 PF00106 short chain dehydrogenase BVD86_15570 PF01554 MatE BVD86_15575 PF00155 Aminotransferase class I and II BVD86_15580 PF04286 Protein of unknown function (DUF445) BVD86_15595 PF04262 Glutamate-cysteine ligase BVD86_15600 PF02600 Disulfide bond formation protein DsbB BVD86_15605 PF04717 Type VI secretion system, phage-baseplate injector BVD86_15645 PF05728 Uncharacterised protein family (UPF0227) BVD86_15650 PF01751 Toprim domain BVD86_15650 PF00204 DNA gyrase B BVD86_15650 PF00986 DNA gyrase B subunit, carboxyl terminus BVD86_15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_15655 PF04115 Ureidoglycolate lyase BVD86_15660 PF03561 Allantoicase repeat BVD86_15665 PF01494 FAD binding domain BVD86_15675 PF00860 Permease family BVD86_15680 PF00576 HIUase/Transthyretin family BVD86_15710 PF02683 Cytochrome C biogenesis protein transmembrane region BVD86_15710 PF11412 Disulphide bond corrector protein DsbC BVD86_15715 PF00990 Diguanylate cyclase, GGDEF domain BVD86_15715 PF07694 5TMR of 5TMR-LYT BVD86_15720 PF07859 alpha/beta hydrolase fold BVD86_15730 PF03960 ArsC family BVD86_15735 PF03372 Endonuclease/Exonuclease/phosphatase family BVD86_15740 PF00156 Phosphoribosyl transferase domain BVD86_15755 PF07715 TonB-dependent Receptor Plug Domain BVD86_15755 PF00593 TonB dependent receptor BVD86_15765 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BVD86_15765 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BVD86_15770 PF03033 Glycosyltransferase family 28 N-terminal domain BVD86_15770 PF04101 Glycosyltransferase family 28 C-terminal domain BVD86_15775 PF01225 Mur ligase family, catalytic domain BVD86_15775 PF02875 Mur ligase family, glutamate ligase domain BVD86_15775 PF08245 Mur ligase middle domain BVD86_15780 PF07478 D-ala D-ala ligase C-terminus BVD86_15780 PF01820 D-ala D-ala ligase N-terminus BVD86_15785 PF08478 POTRA domain, FtsQ-type BVD86_15785 PF03799 Cell division protein FtsQ BVD86_15790 PF02491 SHS2 domain inserted in FTSA BVD86_15795 PF12327 FtsZ family, C-terminal domain BVD86_15795 PF00091 Tubulin/FtsZ family, GTPase domain BVD86_15800 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BVD86_15810 PF01551 Peptidase family M23 BVD86_15815 PF17831 Pyruvate dehydrogenase E1 component middle domain BVD86_15815 PF00456 Transketolase, thiamine diphosphate binding domain BVD86_15820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BVD86_15820 PF00364 Biotin-requiring enzyme BVD86_15820 PF02817 e3 binding domain BVD86_15830 PF01169 Uncharacterized protein family UPF0016 BVD86_15835 PF00593 TonB dependent receptor BVD86_15835 PF07715 TonB-dependent Receptor Plug Domain BVD86_15840 PF01613 Flavin reductase like domain BVD86_15840 PF00258 Flavodoxin BVD86_15845 PF00478 IMP dehydrogenase / GMP reductase domain BVD86_15845 PF00571 CBS domain BVD86_15850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BVD86_15850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BVD86_15850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BVD86_15850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BVD86_15855 PF01243 Pyridoxamine 5'-phosphate oxidase BVD86_15855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BVD86_15860 PF17768 RecJ OB domain BVD86_15860 PF02272 DHHA1 domain BVD86_15860 PF01368 DHH family BVD86_15870 PF03462 PCRF domain BVD86_15870 PF00472 RF-1 domain BVD86_15880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BVD86_15885 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BVD86_15890 PF04452 RNA methyltransferase BVD86_15895 PF00924 Mechanosensitive ion channel BVD86_15895 PF05552 Conserved TM helix BVD86_15905 PF00501 AMP-binding enzyme BVD86_15905 PF13193 AMP-binding enzyme C-terminal domain BVD86_15905 PF16177 Acetyl-coenzyme A synthetase N-terminus BVD86_15910 PF00857 Isochorismatase family BVD86_15915 PF01037 Lrp/AsnC ligand binding domain BVD86_15920 PF00296 Luciferase-like monooxygenase BVD86_15925 PF03358 NADPH-dependent FMN reductase BVD86_15930 PF00196 Bacterial regulatory proteins, luxR family BVD86_15930 PF00072 Response regulator receiver domain BVD86_15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_15940 PF00512 His Kinase A (phospho-acceptor) domain BVD86_15940 PF00072 Response regulator receiver domain BVD86_15940 PF01627 Hpt domain BVD86_15940 PF00672 HAMP domain BVD86_15945 PF04341 Protein of unknown function, DUF485 BVD86_15950 PF00474 Sodium:solute symporter family BVD86_15960 PF02028 BCCT, betaine/carnitine/choline family transporter BVD86_15970 PF00990 Diguanylate cyclase, GGDEF domain BVD86_15970 PF17158 Membrane-associated sensor, integral membrane domain BVD86_15975 PF17755 UvrA DNA-binding domain BVD86_15975 PF17760 UvrA interaction domain BVD86_15980 PF16925 Tetracyclin repressor-like, C-terminal domain BVD86_15980 PF00440 Bacterial regulatory proteins, tetR family BVD86_15995 PF06942 GlpM protein BVD86_16000 PF00106 short chain dehydrogenase BVD86_16005 PF09278 MerR, DNA binding BVD86_16005 PF00376 MerR family regulatory protein BVD86_16010 PF03070 TENA/THI-4/PQQC family BVD86_16010 PF02581 Thiamine monophosphate synthase BVD86_16010 PF08543 Phosphomethylpyrimidine kinase BVD86_16020 PF07690 Major Facilitator Superfamily BVD86_16025 PF00436 Single-strand binding protein family BVD86_16035 PF03591 AzlC protein BVD86_16045 PF00324 Amino acid permease BVD86_16050 PF00155 Aminotransferase class I and II BVD86_16050 PF00392 Bacterial regulatory proteins, gntR family BVD86_16055 PF00202 Aminotransferase class-III BVD86_16060 PF00171 Aldehyde dehydrogenase family BVD86_16065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_16070 PF00857 Isochorismatase family BVD86_16075 PF02678 Pirin BVD86_16075 PF05726 Pirin C-terminal cupin domain BVD86_16080 PF01593 Flavin containing amine oxidoreductase BVD86_16105 PF07690 Major Facilitator Superfamily BVD86_16110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_16110 PF03466 LysR substrate binding domain BVD86_16130 PF00248 Aldo/keto reductase family BVD86_16135 PF12833 Helix-turn-helix domain BVD86_16135 PF02311 AraC-like ligand binding domain BVD86_16150 PF00440 Bacterial regulatory proteins, tetR family BVD86_16175 PF01638 HxlR-like helix-turn-helix BVD86_16180 PF02525 Flavodoxin-like fold BVD86_16205 PF12833 Helix-turn-helix domain BVD86_16215 PF02705 K+ potassium transporter BVD86_16245 PF00230 Major intrinsic protein BVD86_16260 PF00977 Histidine biosynthesis protein BVD86_16265 PF01636 Phosphotransferase enzyme family BVD86_16280 PF00892 EamA-like transporter family BVD86_16290 PF00664 ABC transporter transmembrane region BVD86_16290 PF00005 ABC transporter BVD86_16295 PF00977 Histidine biosynthesis protein BVD86_16300 PF01612 3'-5' exonuclease BVD86_16300 PF00570 HRDC domain BVD86_16310 PF00117 Glutamine amidotransferase class-I BVD86_16315 PF00475 Imidazoleglycerol-phosphate dehydratase BVD86_16335 PF00583 Acetyltransferase (GNAT) family BVD86_16340 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BVD86_16340 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BVD86_16350 PF00512 His Kinase A (phospho-acceptor) domain BVD86_16350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_16350 PF00672 HAMP domain BVD86_16355 PF00486 Transcriptional regulatory protein, C terminal BVD86_16355 PF00072 Response regulator receiver domain BVD86_16360 PF16921 Tex protein YqgF-like domain BVD86_16360 PF17674 HHH domain BVD86_16360 PF00575 S1 RNA binding domain BVD86_16360 PF09371 Tex-like protein N-terminal domain BVD86_16365 PF00916 Sulfate permease family BVD86_16365 PF01740 STAS domain BVD86_16370 PF00106 short chain dehydrogenase BVD86_16375 PF01053 Cys/Met metabolism PLP-dependent enzyme BVD86_16380 PF12848 ABC transporter BVD86_16380 PF00005 ABC transporter BVD86_16405 PF04191 Phospholipid methyltransferase BVD86_16425 PF00529 HlyD membrane-fusion protein of T1SS BVD86_16425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BVD86_16430 PF00873 AcrB/AcrD/AcrF family BVD86_16435 PF01545 Cation efflux family BVD86_16465 PF00324 Amino acid permease BVD86_16480 PF00749 tRNA synthetases class I (E and Q), catalytic domain BVD86_16495 PF01795 MraW methylase family BVD86_16505 PF03717 Penicillin-binding Protein dimerisation domain BVD86_16505 PF00905 Penicillin binding protein transpeptidase domain BVD86_16510 PF08245 Mur ligase middle domain BVD86_16510 PF02875 Mur ligase family, glutamate ligase domain BVD86_16510 PF01225 Mur ligase family, catalytic domain BVD86_16515 PF08245 Mur ligase middle domain BVD86_16515 PF02875 Mur ligase family, glutamate ligase domain BVD86_16515 PF01225 Mur ligase family, catalytic domain BVD86_16520 PF00953 Glycosyl transferase family 4 BVD86_16530 PF13847 Methyltransferase domain BVD86_16535 PF00905 Penicillin binding protein transpeptidase domain BVD86_16535 PF00912 Transglycosylase BVD86_16535 PF17092 Penicillin-binding protein OB-like domain BVD86_16560 PF00263 Bacterial type II and III secretion system protein BVD86_16560 PF07660 Secretin and TonB N terminus short domain BVD86_16560 PF03958 Bacterial type II/III secretion system short domain BVD86_16560 PF11741 AMIN domain BVD86_16565 PF01202 Shikimate kinase BVD86_16570 PF01761 3-dehydroquinate synthase BVD86_16580 PF00310 Glutamine amidotransferases class-II BVD86_16580 PF04898 Glutamate synthase central domain BVD86_16580 PF01493 GXGXG motif BVD86_16580 PF01645 Conserved region in glutamate synthase BVD86_16585 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_16585 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BVD86_16595 PF04011 LemA family BVD86_16600 PF04536 TPM domain BVD86_16610 PF00114 Pilin (bacterial filament) BVD86_16610 PF07963 Prokaryotic N-terminal methylation motif BVD86_16615 PF15864 Protein glycosylation ligase BVD86_16615 PF04932 O-Antigen ligase BVD86_16615 PF11846 Virulence factor membrane-bound polymerase, C-terminal BVD86_16620 PF00210 Ferritin-like domain BVD86_16625 PF04324 BFD-like [2Fe-2S] binding domain BVD86_16630 PF01042 Endoribonuclease L-PSP BVD86_16635 PF04607 Region found in RelA / SpoT proteins BVD86_16635 PF02824 TGS domain BVD86_16635 PF13291 ACT domain BVD86_16640 PF01192 RNA polymerase Rpb6 BVD86_16645 PF00625 Guanylate kinase BVD86_16650 PF02401 LytB protein BVD86_16690 PF00886 Ribosomal protein S16 BVD86_16695 PF01782 RimM N-terminal domain BVD86_16695 PF05239 PRC-barrel domain BVD86_16700 PF01746 tRNA (Guanine-1)-methyltransferase BVD86_16705 PF01245 Ribosomal protein L19 BVD86_16710 PF00561 alpha/beta hydrolase fold BVD86_16715 PF03280 Proteobacterial lipase chaperone protein BVD86_16720 PF09157 Pseudouridine synthase II TruB, C-terminal BVD86_16720 PF16198 tRNA pseudouridylate synthase B C-terminal domain BVD86_16720 PF01509 TruB family pseudouridylate synthase (N terminal domain) BVD86_16725 PF01925 Sulfite exporter TauE/SafE BVD86_16735 PF00892 EamA-like transporter family BVD86_16740 PF00892 EamA-like transporter family BVD86_16745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BVD86_16745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BVD86_16750 PF02913 FAD linked oxidases, C-terminal domain BVD86_16750 PF01565 FAD binding domain BVD86_16760 PF03992 Antibiotic biosynthesis monooxygenase BVD86_16765 PF02525 Flavodoxin-like fold BVD86_16775 PF07690 Major Facilitator Superfamily BVD86_16780 PF12805 FUSC-like inner membrane protein yccS BVD86_16785 PF00080 Copper/zinc superoxide dismutase (SODC) BVD86_16790 PF01594 AI-2E family transporter BVD86_16795 PF13614 AAA domain BVD86_16815 PF08241 Methyltransferase domain BVD86_16825 PF00324 Amino acid permease BVD86_16830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BVD86_16830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BVD86_16835 PF00202 Aminotransferase class-III BVD86_16840 PF04958 Arginine N-succinyltransferase beta subunit BVD86_16845 PF00171 Aldehyde dehydrogenase family BVD86_16850 PF04996 Succinylarginine dihydrolase BVD86_16855 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BVD86_16885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_16885 PF03466 LysR substrate binding domain BVD86_16890 PF00892 EamA-like transporter family BVD86_16910 PF02092 Glycyl-tRNA synthetase beta subunit BVD86_16910 PF05746 DALR anticodon binding domain BVD86_16915 PF02091 Glycyl-tRNA synthetase alpha subunit BVD86_16945 PF00392 Bacterial regulatory proteins, gntR family BVD86_16945 PF07085 DRTGG domain BVD86_16945 PF00571 CBS domain BVD86_16945 PF03061 Thioesterase superfamily BVD86_16950 PF04024 PspC domain BVD86_16960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_16960 PF12806 Acetyl-CoA dehydrogenase C-terminal like BVD86_16960 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_16960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_16970 PF08501 Shikimate dehydrogenase substrate binding domain BVD86_16970 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BVD86_16970 PF01488 Shikimate / quinate 5-dehydrogenase BVD86_16975 PF01218 Coproporphyrinogen III oxidase BVD86_16980 PF00925 GTP cyclohydrolase II BVD86_16985 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BVD86_16985 PF02779 Transketolase, pyrimidine binding domain BVD86_16985 PF02780 Transketolase, C-terminal domain BVD86_16990 PF00459 Inositol monophosphatase family BVD86_16995 PF00270 DEAD/DEAH box helicase BVD86_16995 PF12343 Cold shock protein DEAD box A BVD86_16995 PF00271 Helicase conserved C-terminal domain BVD86_16995 PF03880 DbpA RNA binding domain BVD86_17005 PF00005 ABC transporter BVD86_17010 PF02405 Permease MlaE BVD86_17020 PF05494 MlaC protein BVD86_17030 PF01544 CorA-like Mg2+ transporter protein BVD86_17035 PF03641 Possible lysine decarboxylase BVD86_17040 PF00293 NUDIX domain BVD86_17045 PF00156 Phosphoribosyl transferase domain BVD86_17050 PF17191 RecG wedge domain BVD86_17050 PF00271 Helicase conserved C-terminal domain BVD86_17050 PF00270 DEAD/DEAH box helicase BVD86_17065 PF01553 Acyltransferase BVD86_17075 PF00375 Sodium:dicarboxylate symporter family BVD86_17085 PF01926 50S ribosome-binding GTPase BVD86_17090 PF02082 Transcriptional regulator BVD86_17095 PF00175 Oxidoreductase NAD-binding domain BVD86_17095 PF00042 Globin BVD86_17095 PF00970 Oxidoreductase FAD-binding domain BVD86_17100 PF05872 Bacterial protein of unknown function (DUF853) BVD86_17105 PF01053 Cys/Met metabolism PLP-dependent enzyme BVD86_17110 PF00117 Glutamine amidotransferase class-I BVD86_17115 PF00338 Ribosomal protein S10p/S20e BVD86_17120 PF00297 Ribosomal protein L3 BVD86_17125 PF00573 Ribosomal protein L4/L1 family BVD86_17130 PF00276 Ribosomal protein L23 BVD86_17135 PF03947 Ribosomal Proteins L2, C-terminal domain BVD86_17135 PF00181 Ribosomal Proteins L2, RNA binding domain BVD86_17140 PF00203 Ribosomal protein S19 BVD86_17145 PF00237 Ribosomal protein L22p/L17e BVD86_17150 PF00189 Ribosomal protein S3, C-terminal domain BVD86_17150 PF07650 KH domain BVD86_17155 PF00252 Ribosomal protein L16p/L10e BVD86_17160 PF00831 Ribosomal L29 protein BVD86_17165 PF00366 Ribosomal protein S17 BVD86_17170 PF00238 Ribosomal protein L14p/L23e BVD86_17175 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BVD86_17175 PF00467 KOW motif BVD86_17180 PF00281 Ribosomal protein L5 BVD86_17180 PF00673 ribosomal L5P family C-terminus BVD86_17185 PF00253 Ribosomal protein S14p/S29e BVD86_17190 PF00410 Ribosomal protein S8 BVD86_17195 PF00347 Ribosomal protein L6 BVD86_17200 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BVD86_17205 PF03719 Ribosomal protein S5, C-terminal domain BVD86_17205 PF00333 Ribosomal protein S5, N-terminal domain BVD86_17210 PF00327 Ribosomal protein L30p/L7e BVD86_17215 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BVD86_17220 PF00344 SecY translocase BVD86_17225 PF00444 Ribosomal protein L36 BVD86_17230 PF00416 Ribosomal protein S13/S18 BVD86_17235 PF00411 Ribosomal protein S11 BVD86_17240 PF00163 Ribosomal protein S4/S9 N-terminal domain BVD86_17240 PF01479 S4 domain BVD86_17245 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BVD86_17245 PF01000 RNA polymerase Rpb3/RpoA insert domain BVD86_17245 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BVD86_17250 PF01196 Ribosomal protein L17 BVD86_17255 PF00743 Flavin-binding monooxygenase-like BVD86_17260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_17260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_17260 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_17265 PF03937 Flavinator of succinate dehydrogenase BVD86_17295 PF09526 Probable metal-binding protein (DUF2387) BVD86_17300 PF01432 Peptidase family M3 BVD86_17305 PF08206 Ribonuclease B OB domain BVD86_17305 PF00773 RNB domain BVD86_17305 PF17876 Cold shock domain BVD86_17305 PF00575 S1 RNA binding domain BVD86_17305 PF08461 Ribonuclease R winged-helix domain BVD86_17350 PF01557 Fumarylacetoacetate (FAA) hydrolase family BVD86_17355 PF03631 Virulence factor BrkB BVD86_17360 PF03358 NADPH-dependent FMN reductase BVD86_17385 PF02130 Uncharacterized protein family UPF0054 BVD86_17390 PF02562 PhoH-like protein BVD86_17395 PF01938 TRAM domain BVD86_17395 PF00919 Uncharacterized protein family UPF0004 BVD86_17395 PF04055 Radical SAM superfamily BVD86_17400 PF10145 Phage-related minor tail protein BVD86_17400 PF01464 Transglycosylase SLT domain BVD86_17400 PF01551 Peptidase family M23 BVD86_17410 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BVD86_17410 PF00056 lactate/malate dehydrogenase, NAD binding domain BVD86_17430 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BVD86_17435 PF01066 CDP-alcohol phosphatidyltransferase BVD86_17480 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_17480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_17480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_17485 PF00440 Bacterial regulatory proteins, tetR family BVD86_17485 PF17932 Tetracyclin repressor-like, C-terminal domain BVD86_17500 PF01039 Carboxyl transferase domain BVD86_17505 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_17505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_17505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_17515 PF02785 Biotin carboxylase C-terminal domain BVD86_17515 PF00364 Biotin-requiring enzyme BVD86_17515 PF00289 Biotin carboxylase, N-terminal domain BVD86_17515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BVD86_17525 PF04386 Stringent starvation protein B BVD86_17530 PF13417 Glutathione S-transferase, N-terminal domain BVD86_17530 PF00043 Glutathione S-transferase, C-terminal domain BVD86_17535 PF00380 Ribosomal protein S9/S16 BVD86_17540 PF00572 Ribosomal protein L13 BVD86_17545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BVD86_17550 PF00398 Ribosomal RNA adenine dimethylase BVD86_17555 PF00149 Calcineurin-like phosphoesterase BVD86_17575 PF13167 GTP-binding GTPase N-terminal BVD86_17575 PF16360 GTP-binding GTPase Middle Region BVD86_17575 PF01926 50S ribosome-binding GTPase BVD86_17585 PF13091 PLD-like domain BVD86_17590 PF10518 TAT (twin-arginine translocation) pathway signal sequence BVD86_17590 PF00149 Calcineurin-like phosphoesterase BVD86_17595 PF00691 OmpA family BVD86_17595 PF01389 OmpA-like transmembrane domain BVD86_17600 PF17152 Periplasmic sensor domain BVD86_17600 PF00990 Diguanylate cyclase, GGDEF domain BVD86_17605 PF13689 YfiR/HmsC-like BVD86_17645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BVD86_17645 PF00403 Heavy-metal-associated domain BVD86_17645 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_17655 PF00753 Metallo-beta-lactamase superfamily BVD86_17655 PF04273 Putative phosphatase (DUF442) BVD86_17660 PF00561 alpha/beta hydrolase fold BVD86_17665 PF00085 Thioredoxin BVD86_17670 PF03061 Thioesterase superfamily BVD86_17685 PF04461 Protein of unknown function (DUF520) BVD86_17695 PF01266 FAD dependent oxidoreductase BVD86_17695 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BVD86_17705 PF03795 YCII-related domain BVD86_17710 PF04279 Intracellular septation protein A BVD86_17720 PF01062 Bestrophin, RFP-TM, chloride channel BVD86_17725 PF04002 RadC-like JAB domain BVD86_17730 PF02441 Flavoprotein BVD86_17730 PF04127 DNA / pantothenate metabolism flavoprotein BVD86_17735 PF07549 SecD/SecF GG Motif BVD86_17735 PF02355 Protein export membrane protein BVD86_17740 PF13721 SecD export protein N-terminal TM region BVD86_17740 PF07549 SecD/SecF GG Motif BVD86_17740 PF02355 Protein export membrane protein BVD86_17745 PF02699 Preprotein translocase subunit BVD86_17750 PF01702 Queuine tRNA-ribosyltransferase BVD86_17770 PF02547 Queuosine biosynthesis protein BVD86_17825 PF10549 ORF11CD3 domain BVD86_17825 PF09669 Phage regulatory protein Rha (Phage_pRha) BVD86_17950 PF01510 N-acetylmuramoyl-L-alanine amidase BVD86_17950 PF01471 Putative peptidoglycan binding domain BVD86_18010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_18010 PF00497 Bacterial extracellular solute-binding proteins, family 3 BVD86_18010 PF00072 Response regulator receiver domain BVD86_18010 PF00512 His Kinase A (phospho-acceptor) domain BVD86_18015 PF08335 GlnD PII-uridylyltransferase BVD86_18015 PF03710 Glutamate-ammonia ligase adenylyltransferase BVD86_18020 PF01063 Amino-transferase class IV BVD86_18035 PF01522 Polysaccharide deacetylase BVD86_18040 PF00535 Glycosyl transferase family 2 BVD86_18045 PF00534 Glycosyl transferases group 1 BVD86_18045 PF13439 Glycosyltransferase Family 4 BVD86_18075 PF01336 OB-fold nucleic acid binding domain BVD86_18075 PF00152 tRNA synthetases class II (D, K and N) BVD86_18075 PF02938 GAD domain BVD86_18085 PF07715 TonB-dependent Receptor Plug Domain BVD86_18085 PF00593 TonB dependent receptor BVD86_18105 PF06146 Phosphate-starvation-inducible E BVD86_18110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_18110 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_18110 PF12806 Acetyl-CoA dehydrogenase C-terminal like BVD86_18110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_18115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BVD86_18115 PF02770 Acyl-CoA dehydrogenase, middle domain BVD86_18115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BVD86_18115 PF12806 Acetyl-CoA dehydrogenase C-terminal like BVD86_18125 PF00512 His Kinase A (phospho-acceptor) domain BVD86_18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_18125 PF00672 HAMP domain BVD86_18130 PF00486 Transcriptional regulatory protein, C terminal BVD86_18130 PF00072 Response regulator receiver domain BVD86_18140 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BVD86_18160 PF01923 Cobalamin adenosyltransferase BVD86_18165 PF00593 TonB dependent receptor BVD86_18165 PF07715 TonB-dependent Receptor Plug Domain BVD86_18170 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BVD86_18175 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_18200 PF00290 Tryptophan synthase alpha chain BVD86_18205 PF01039 Carboxyl transferase domain BVD86_18210 PF08245 Mur ligase middle domain BVD86_18210 PF02875 Mur ligase family, glutamate ligase domain BVD86_18225 PF00753 Metallo-beta-lactamase superfamily BVD86_18230 PF10417 C-terminal domain of 1-Cys peroxiredoxin BVD86_18230 PF00578 AhpC/TSA family BVD86_18235 PF07517 SecA DEAD-like domain BVD86_18235 PF02810 SEC-C motif BVD86_18235 PF07516 SecA Wing and Scaffold domain BVD86_18235 PF01043 SecA preprotein cross-linking domain BVD86_18245 PF00083 Sugar (and other) transporter BVD86_18245 PF07690 Major Facilitator Superfamily BVD86_18250 PF03006 Haemolysin-III related BVD86_18260 PF13673 Acetyltransferase (GNAT) domain BVD86_18275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BVD86_18275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BVD86_18275 PF00378 Enoyl-CoA hydratase/isomerase BVD86_18280 PF00108 Thiolase, N-terminal domain BVD86_18280 PF02803 Thiolase, C-terminal domain BVD86_18285 PF02311 AraC-like ligand binding domain BVD86_18285 PF12833 Helix-turn-helix domain BVD86_18290 PF02515 CoA-transferase family III BVD86_18295 PF04966 Carbohydrate-selective porin, OprB family BVD86_18300 PF01011 PQQ enzyme repeat BVD86_18305 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BVD86_18305 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BVD86_18315 PF00893 Small Multidrug Resistance protein BVD86_18325 PF02803 Thiolase, C-terminal domain BVD86_18325 PF00108 Thiolase, N-terminal domain BVD86_18330 PF00114 Pilin (bacterial filament) BVD86_18330 PF07963 Prokaryotic N-terminal methylation motif BVD86_18335 PF13505 Outer membrane protein beta-barrel domain BVD86_18335 PF00691 OmpA family BVD86_18340 PF01139 tRNA-splicing ligase RtcB BVD86_18345 PF00324 Amino acid permease BVD86_18350 PF05175 Methyltransferase small domain BVD86_18350 PF08468 Methyltransferase small domain N-terminal BVD86_18355 PF00860 Permease family BVD86_18365 PF01741 Large-conductance mechanosensitive channel, MscL BVD86_18375 PF02264 LamB porin BVD86_18385 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BVD86_18385 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BVD86_18385 PF06827 Zinc finger found in FPG and IleRS BVD86_18390 PF02245 Methylpurine-DNA glycosylase (MPG) BVD86_18395 PF07715 TonB-dependent Receptor Plug Domain BVD86_18395 PF00593 TonB dependent receptor BVD86_18400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BVD86_18415 PF10411 Disulfide bond isomerase protein N-terminus BVD86_18415 PF13098 Thioredoxin-like domain BVD86_18420 PF01571 Aminomethyltransferase folate-binding domain BVD86_18435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BVD86_18435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BVD86_18440 PF00860 Permease family BVD86_18445 PF01613 Flavin reductase like domain BVD86_18450 PF01042 Endoribonuclease L-PSP BVD86_18455 PF00857 Isochorismatase family BVD86_18460 PF00296 Luciferase-like monooxygenase BVD86_18465 PF00881 Nitroreductase family BVD86_18470 PF12697 Alpha/beta hydrolase family BVD86_18475 PF04343 Protein of unknown function, DUF488 BVD86_18480 PF08274 PhnA Zinc-Ribbon BVD86_18480 PF03831 PhnA domain BVD86_18485 PF07411 Domain of unknown function (DUF1508) BVD86_18490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BVD86_18490 PF03129 Anticodon binding domain BVD86_18490 PF04073 Aminoacyl-tRNA editing domain BVD86_18495 PF00873 AcrB/AcrD/AcrF family BVD86_18510 PF00072 Response regulator receiver domain BVD86_18515 PF00072 Response regulator receiver domain BVD86_18520 PF01584 CheW-like domain BVD86_18525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BVD86_18525 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BVD86_18530 PF01627 Hpt domain BVD86_18530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_18530 PF01584 CheW-like domain BVD86_18530 PF00072 Response regulator receiver domain BVD86_18540 PF01546 Peptidase family M20/M25/M40 BVD86_18540 PF07687 Peptidase dimerisation domain BVD86_18545 PF08085 Entericidin EcnA/B family BVD86_18555 PF04304 Protein of unknown function (DUF454) BVD86_18560 PF03734 L,D-transpeptidase catalytic domain BVD86_18560 PF17969 L,D-transpeptidase C-terminal domain BVD86_18600 PF00175 Oxidoreductase NAD-binding domain BVD86_18600 PF00667 FAD binding domain BVD86_18600 PF00258 Flavodoxin BVD86_18610 PF12805 FUSC-like inner membrane protein yccS BVD86_18615 PF07690 Major Facilitator Superfamily BVD86_18620 PF00881 Nitroreductase family BVD86_18640 PF01235 Sodium:alanine symporter family BVD86_18645 PF01734 Patatin-like phospholipase BVD86_18650 PF00291 Pyridoxal-phosphate dependent enzyme BVD86_18650 PF13291 ACT domain BVD86_18655 PF05992 SbmA/BacA-like family BVD86_18680 PF02637 GatB domain BVD86_18680 PF02934 GatB/GatE catalytic domain BVD86_18685 PF01425 Amidase BVD86_18690 PF02686 Glu-tRNAGln amidotransferase C subunit BVD86_18700 PF04085 rod shape-determining protein MreC BVD86_18705 PF04093 rod shape-determining protein MreD BVD86_18710 PF02545 Maf-like protein BVD86_18715 PF00575 S1 RNA binding domain BVD86_18715 PF10150 Ribonuclease E/G family BVD86_18725 PF06974 Protein of unknown function (DUF1298) BVD86_18725 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BVD86_18730 PF01507 Phosphoadenosine phosphosulfate reductase family BVD86_18745 PF02525 Flavodoxin-like fold BVD86_18765 PF02673 Bacitracin resistance protein BacA BVD86_18770 PF12833 Helix-turn-helix domain BVD86_18770 PF06719 AraC-type transcriptional regulator N-terminus BVD86_18775 PF00109 Beta-ketoacyl synthase, N-terminal domain BVD86_18775 PF08990 Erythronolide synthase docking BVD86_18775 PF02801 Beta-ketoacyl synthase, C-terminal domain BVD86_18775 PF08659 KR domain BVD86_18775 PF16197 Ketoacyl-synthetase C-terminal extension BVD86_18775 PF09277 Erythronolide synthase, docking BVD86_18775 PF08240 Alcohol dehydrogenase GroES-like domain BVD86_18775 PF14765 Polyketide synthase dehydratase BVD86_18775 PF00698 Acyl transferase domain BVD86_18775 PF00550 Phosphopantetheine attachment site BVD86_18780 PF01965 DJ-1/PfpI family BVD86_18810 PF00324 Amino acid permease BVD86_18815 PF04303 PrpF protein BVD86_18820 PF00348 Polyprenyl synthetase BVD86_18825 PF04237 YjbR BVD86_18830 PF01145 SPFH domain / Band 7 family BVD86_18840 PF01734 Patatin-like phospholipase BVD86_18865 PF08019 Phosphoethanolamine transferase EptA/EptB BVD86_18865 PF00884 Sulfatase BVD86_18870 PF00486 Transcriptional regulatory protein, C terminal BVD86_18870 PF00072 Response regulator receiver domain BVD86_18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BVD86_18875 PF08521 Two-component sensor kinase N-terminal BVD86_18875 PF00512 His Kinase A (phospho-acceptor) domain BVD86_18885 PF00909 Ammonium Transporter Family BVD86_18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_18890 PF03466 LysR substrate binding domain BVD86_18915 PF00133 tRNA synthetases class I (I, L, M and V) BVD86_18915 PF10458 Valyl tRNA synthetase tRNA binding arm BVD86_18915 PF08264 Anticodon-binding domain of tRNA BVD86_18935 PF01906 Putative heavy-metal-binding BVD86_18940 PF01906 Putative heavy-metal-binding BVD86_18945 PF02321 Outer membrane efflux protein BVD86_18950 PF00873 AcrB/AcrD/AcrF family BVD86_18955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BVD86_18955 PF00529 HlyD membrane-fusion protein of T1SS BVD86_18960 PF01569 PAP2 superfamily BVD86_18970 PF00348 Polyprenyl synthetase BVD86_18975 PF00829 Ribosomal prokaryotic L21 protein BVD86_18980 PF01016 Ribosomal L27 protein BVD86_18985 PF03548 Outer membrane lipoprotein carrier protein LolA BVD86_18995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BVD86_18995 PF02403 Seryl-tRNA synthetase N-terminal domain BVD86_19000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BVD86_19000 PF10414 Sirohaem synthase dimerisation region BVD86_19000 PF14824 Sirohaem biosynthesis protein central BVD86_19005 PF00588 SpoU rRNA Methylase family BVD86_19035 PF03358 NADPH-dependent FMN reductase BVD86_19040 PF13520 Amino acid permease BVD86_19045 PF00465 Iron-containing alcohol dehydrogenase BVD86_19055 PF03099 Biotin/lipoate A/B protein ligase family BVD86_19060 PF04359 Protein of unknown function (DUF493) BVD86_19065 PF04539 Sigma-70 region 3 BVD86_19065 PF04542 Sigma-70 region 2 BVD86_19065 PF04545 Sigma-70, region 4 BVD86_19065 PF04546 Sigma-70, non-essential region BVD86_19065 PF03979 Sigma-70 factor, region 1.1 BVD86_19065 PF00140 Sigma-70 factor, region 1.2 BVD86_19095 PF00285 Citrate synthase, C-terminal domain BVD86_19105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BVD86_19110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BVD86_19115 PF00890 FAD binding domain BVD86_19115 PF02910 Fumarate reductase flavoprotein C-term BVD86_19120 PF13085 2Fe-2S iron-sulfur cluster binding domain BVD86_19135 PF16078 2-oxoglutarate dehydrogenase N-terminus BVD86_19135 PF16870 2-oxoglutarate dehydrogenase C-terminal BVD86_19135 PF00676 Dehydrogenase E1 component BVD86_19135 PF02779 Transketolase, pyrimidine binding domain BVD86_19140 PF02817 e3 binding domain BVD86_19140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BVD86_19140 PF00364 Biotin-requiring enzyme BVD86_19145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BVD86_19145 PF07992 Pyridine nucleotide-disulphide oxidoreductase BVD86_19150 PF08442 ATP-grasp domain BVD86_19150 PF00549 CoA-ligase BVD86_19155 PF00549 CoA-ligase BVD86_19155 PF02629 CoA binding domain BVD86_19160 PF00579 tRNA synthetases class I (W and Y) BVD86_19165 PF05661 Protein of unknown function (DUF808) BVD86_19170 PF04228 Putative neutral zinc metallopeptidase BVD86_19175 PF00999 Sodium/hydrogen exchanger family BVD86_19190 PF09587 Bacterial capsule synthesis protein PGA_cap BVD86_19200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BVD86_19210 PF00582 Universal stress protein family BVD86_19215 PF00132 Bacterial transferase hexapeptide (six repeats) BVD86_19220 PF01042 Endoribonuclease L-PSP BVD86_19230 PF01272 Transcription elongation factor, GreA/GreB, C-term BVD86_19230 PF03449 Transcription elongation factor, N-terminal BVD86_19235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BVD86_19235 PF02142 MGS-like domain BVD86_19235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BVD86_19240 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BVD86_19240 PF00117 Glutamine amidotransferase class-I BVD86_19265 PF01985 CRS1 / YhbY (CRM) domain BVD86_19270 PF01728 FtsJ-like methyltransferase BVD86_19275 PF17862 AAA+ lid domain BVD86_19275 PF01434 Peptidase family M41 BVD86_19275 PF00004 ATPase family associated with various cellular activities (AAA) BVD86_19275 PF06480 FtsH Extracellular BVD86_19280 PF00809 Pterin binding enzyme BVD86_19300 PF16655 PhoD-like phosphatase, N-terminal domain BVD86_19300 PF09423 PhoD-like phosphatase BVD86_19320 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BVD86_19320 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BVD86_19335 PF00083 Sugar (and other) transporter BVD86_19340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BVD86_19340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BVD86_19345 PF01266 FAD dependent oxidoreductase BVD86_19345 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BVD86_19350 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BVD86_19350 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BVD86_19355 PF00781 Diacylglycerol kinase catalytic domain BVD86_19360 PF00149 Calcineurin-like phosphoesterase BVD86_19365 PF00166 Chaperonin 10 Kd subunit BVD86_19370 PF00118 TCP-1/cpn60 chaperonin family BVD86_19375 PF01219 Prokaryotic diacylglycerol kinase BVD86_19385 PF03009 Glycerophosphoryl diester phosphodiesterase family BVD86_19390 PF00873 AcrB/AcrD/AcrF family BVD86_19400 PF01435 Peptidase family M48 BVD86_19405 PF01464 Transglycosylase SLT domain BVD86_19415 PF01171 PP-loop family BVD86_19425 PF00497 Bacterial extracellular solute-binding proteins, family 3 BVD86_19425 PF01464 Transglycosylase SLT domain BVD86_19430 PF01272 Transcription elongation factor, GreA/GreB, C-term BVD86_19430 PF03449 Transcription elongation factor, N-terminal BVD86_19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BVD86_19450 PF03466 LysR substrate binding domain BVD86_19455 PF03180 NLPA lipoprotein BVD86_19500 PF00529 HlyD membrane-fusion protein of T1SS BVD86_19500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BVD86_19505 PF00873 AcrB/AcrD/AcrF family BVD86_19510 PF00881 Nitroreductase family BVD86_19525 PF02595 Glycerate kinase family BVD86_19530 PF00384 Molybdopterin oxidoreductase BVD86_19535 PF02634 FdhD/NarQ family BVD86_19540 PF06803 Protein of unknown function (DUF1232) BVD86_19545 PF11890 Domain of unknown function (DUF3410) BVD86_19545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BVD86_19545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BVD86_19550 PF00152 tRNA synthetases class II (D, K and N) BVD86_19560 PF18073 Rubredoxin metal binding domain BVD86_19565 PF01235 Sodium:alanine symporter family BVD86_19570 PF00324 Amino acid permease BVD86_19580 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BVD86_19580 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BVD86_19585 PF01678 Diaminopimelate epimerase BVD86_19590 PF03747 ADP-ribosylglycohydrolase BVD86_19595 PF00561 alpha/beta hydrolase fold BVD86_19600 PF01810 LysE type translocator BVD86_19605 PF00589 Phage integrase family BVD86_19605 PF02899 Phage integrase, N-terminal SAM-like domain BVD86_19610 PF01012 Electron transfer flavoprotein domain BVD86_19615 PF00766 Electron transfer flavoprotein FAD-binding domain BVD86_19615 PF01012 Electron transfer flavoprotein domain BVD86_19620 PF03989 DNA gyrase C-terminal domain, beta-propeller BVD86_19620 PF00521 DNA gyrase/topoisomerase IV, subunit A BVD86_19635 PF13533 Biotin-lipoyl like BVD86_19645 PF00266 Aminotransferase class-V BVD86_19655 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BVD86_19660 PF00892 EamA-like transporter family BVD86_19665 PF12704 MacB-like periplasmic core domain BVD86_19665 PF02687 FtsX-like permease family BVD86_19670 PF00005 ABC transporter BVD86_19675 PF03772 Competence protein BVD86_19675 PF13567 Domain of unknown function (DUF4131) BVD86_19675 PF00753 Metallo-beta-lactamase superfamily BVD86_19685 PF01343 Peptidase family S49 BVD86_19685 PF06965 Na+/H+ antiporter 1 BVD86_19690 PF12697 Alpha/beta hydrolase family BVD86_19695 PF00551 Formyl transferase BVD86_19700 PF02769 AIR synthase related protein, C-terminal domain BVD86_19700 PF00586 AIR synthase related protein, N-terminal domain BVD86_19705 PF01594 AI-2E family transporter BVD86_19760 PF05973 Phage derived protein Gp49-like (DUF891) BVD86_19765 PF00905 Penicillin binding protein transpeptidase domain