locus-tag class description LDO52_00005 PF00308 Bacterial dnaA protein LDO52_00005 PF08299 Bacterial dnaA protein helix-turn-helix LDO52_00005 PF11638 DnaA N-terminal domain LDO52_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LDO52_00010 PF02767 DNA polymerase III beta subunit, central domain LDO52_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LDO52_00015 PF02463 RecF/RecN/SMC N terminal domain LDO52_00020 PF00204 DNA gyrase B LDO52_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LDO52_00020 PF18053 DNA gyrase B subunit insert domain LDO52_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_00020 PF01751 Toprim domain LDO52_00025 PF08240 Alcohol dehydrogenase GroES-like domain LDO52_00025 PF13823 Alcohol dehydrogenase GroES-associated LDO52_00025 PF00107 Zinc-binding dehydrogenase LDO52_00030 PF12848 ABC transporter LDO52_00030 PF00005 ABC transporter LDO52_00050 PF01521 Iron-sulphur cluster biosynthesis LDO52_00070 PF00012 Hsp70 protein LDO52_00075 PF01025 GrpE LDO52_00085 PF07859 alpha/beta hydrolase fold LDO52_00095 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDO52_00130 PF07690 Major Facilitator Superfamily LDO52_00135 PF07690 Major Facilitator Superfamily LDO52_00140 PF13737 Transposase DDE domain LDO52_00150 PF12796 Ankyrin repeats (3 copies) LDO52_00155 PF01965 DJ-1/PfpI family LDO52_00165 PF00171 Aldehyde dehydrogenase family LDO52_00170 PF00209 Sodium:neurotransmitter symporter family LDO52_00180 PF02535 ZIP Zinc transporter LDO52_00185 PF01189 16S rRNA methyltransferase RsmB/F LDO52_00185 PF01029 NusB family LDO52_00190 PF00551 Formyl transferase LDO52_00190 PF02911 Formyl transferase, C-terminal domain LDO52_00195 PF00920 Dehydratase family LDO52_00200 PF00920 Dehydratase family LDO52_00205 PF07282 Putative transposase DNA-binding domain LDO52_00205 PF01385 Probable transposase LDO52_00205 PF12323 Helix-turn-helix domain LDO52_00225 PF00860 Permease family LDO52_00230 PF00311 Phosphoenolpyruvate carboxylase LDO52_00235 PF00440 Bacterial regulatory proteins, tetR family LDO52_00240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO52_00245 PF00873 AcrB/AcrD/AcrF family LDO52_00255 PF00226 DnaJ domain LDO52_00255 PF00684 DnaJ central domain LDO52_00255 PF01556 DnaJ C terminal domain LDO52_00275 PF00535 Glycosyl transferase family 2 LDO52_00280 PF04138 GtrA-like protein LDO52_00285 PF05173 Dihydrodipicolinate reductase, C-terminus LDO52_00285 PF01113 Dihydrodipicolinate reductase, N-terminus LDO52_00295 PF08240 Alcohol dehydrogenase GroES-like domain LDO52_00295 PF00107 Zinc-binding dehydrogenase LDO52_00300 PF03352 Methyladenine glycosylase LDO52_00310 PF01551 Peptidase family M23 LDO52_00315 PF14815 NUDIX domain LDO52_00315 PF00730 HhH-GPD superfamily base excision DNA repair protein LDO52_00315 PF00633 Helix-hairpin-helix motif LDO52_00330 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LDO52_00330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO52_00335 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LDO52_00335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO52_00340 PF14052 Capsule assembly protein Wzi LDO52_00345 PF13614 AAA domain LDO52_00345 PF13807 G-rich domain on putative tyrosine kinase LDO52_00345 PF02706 Chain length determinant protein LDO52_00350 PF01451 Low molecular weight phosphotyrosine protein phosphatase LDO52_00355 PF02563 Polysaccharide biosynthesis/export protein LDO52_00355 PF10531 SLBB domain LDO52_00355 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LDO52_00360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LDO52_00360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LDO52_00360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LDO52_00365 PF01370 NAD dependent epimerase/dehydratase family LDO52_00375 PF00535 Glycosyl transferase family 2 LDO52_00385 PF00535 Glycosyl transferase family 2 LDO52_00390 PF00535 Glycosyl transferase family 2 LDO52_00390 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 LDO52_00395 PF13439 Glycosyltransferase Family 4 LDO52_00395 PF00534 Glycosyl transferases group 1 LDO52_00400 PF13477 Glycosyl transferase 4-like LDO52_00400 PF00534 Glycosyl transferases group 1 LDO52_00405 PF02397 Bacterial sugar transferase LDO52_00410 PF17836 PglD N-terminal domain LDO52_00410 PF14602 Hexapeptide repeat of succinyl-transferase LDO52_00410 PF00132 Bacterial transferase hexapeptide (six repeats) LDO52_00415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LDO52_00420 PF02719 Polysaccharide biosynthesis protein LDO52_00425 PF00483 Nucleotidyl transferase LDO52_00430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LDO52_00430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LDO52_00430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LDO52_00435 PF00342 Phosphoglucose isomerase LDO52_00440 PF16363 GDP-mannose 4,6 dehydratase LDO52_00445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDO52_00445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDO52_00445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDO52_00445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDO52_00450 PF01380 SIS domain LDO52_00455 PF00132 Bacterial transferase hexapeptide (six repeats) LDO52_00455 PF14602 Hexapeptide repeat of succinyl-transferase LDO52_00455 PF12804 MobA-like NTP transferase domain LDO52_00460 PF04608 Phosphatidylglycerophosphatase A LDO52_00465 PF00586 AIR synthase related protein, N-terminal domain LDO52_00465 PF02769 AIR synthase related protein, C-terminal domain LDO52_00470 PF01029 NusB family LDO52_00475 PF00885 6,7-dimethyl-8-ribityllumazine synthase LDO52_00480 PF00925 GTP cyclohydrolase II LDO52_00480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LDO52_00485 PF00171 Aldehyde dehydrogenase family LDO52_00495 PF00390 Malic enzyme, N-terminal domain LDO52_00495 PF03949 Malic enzyme, NAD binding domain LDO52_00500 PF09905 DNA-binding protein VF530 LDO52_00535 PF01722 BolA-like protein LDO52_00545 PF13614 AAA domain LDO52_00560 PF09335 SNARE associated Golgi protein LDO52_00565 PF04076 Bacterial OB fold (BOF) protein LDO52_00570 PF02540 NAD synthase LDO52_00570 PF00117 Glutamine amidotransferase class-I LDO52_00570 PF00958 GMP synthase C terminal domain LDO52_00580 PF05726 Pirin C-terminal cupin domain LDO52_00580 PF02678 Pirin LDO52_00590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_00590 PF00989 PAS fold LDO52_00590 PF11808 Phosphate regulon sensor protein PhoR LDO52_00590 PF00512 His Kinase A (phospho-acceptor) domain LDO52_00595 PF00072 Response regulator receiver domain LDO52_00595 PF00486 Transcriptional regulatory protein, C terminal LDO52_00605 PF00106 short chain dehydrogenase LDO52_00610 PF01554 MatE LDO52_00615 PF00155 Aminotransferase class I and II LDO52_00620 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LDO52_00620 PF04717 Type VI secretion system, phage-baseplate injector LDO52_00620 PF13296 Putative type VI secretion system Rhs element Vgr LDO52_00625 PF05257 CHAP domain LDO52_00625 PF01476 LysM domain LDO52_00635 PF04261 Dyp-type peroxidase family LDO52_00640 PF01810 LysE type translocator LDO52_00645 PF04463 Protein of unknown function (DUF523) LDO52_00650 PF00950 ABC 3 transport family LDO52_00655 PF00005 ABC transporter LDO52_00675 PF00119 ATP synthase A chain LDO52_00680 PF00137 ATP synthase subunit C LDO52_00685 PF00430 ATP synthase B/B' CF(0) LDO52_00690 PF00213 ATP synthase delta (OSCP) subunit LDO52_00695 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDO52_00695 PF00306 ATP synthase alpha/beta chain, C terminal domain LDO52_00695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDO52_00700 PF00231 ATP synthase LDO52_00705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDO52_00705 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDO52_00710 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LDO52_00720 PF00171 Aldehyde dehydrogenase family LDO52_00725 PF05726 Pirin C-terminal cupin domain LDO52_00725 PF02678 Pirin LDO52_00735 PF00255 Glutathione peroxidase LDO52_00740 PF00892 EamA-like transporter family LDO52_00745 PF01300 Telomere recombination LDO52_00750 PF02481 DNA recombination-mediator protein A LDO52_00750 PF17782 DprA winged helix domain LDO52_00760 PF01327 Polypeptide deformylase LDO52_00800 PF07690 Major Facilitator Superfamily LDO52_00805 PF08497 Radical SAM N-terminal LDO52_00805 PF04055 Radical SAM superfamily LDO52_00805 PF11842 Domain of unknown function (DUF3362) LDO52_00825 PF00817 impB/mucB/samB family LDO52_00825 PF11798 IMS family HHH motif LDO52_00825 PF11799 impB/mucB/samB family C-terminal domain LDO52_00840 PF07690 Major Facilitator Superfamily LDO52_00855 PF03641 Possible lysine decarboxylase LDO52_00860 PF03471 Transporter associated domain LDO52_00860 PF03741 Integral membrane protein TerC family LDO52_00865 PF02810 SEC-C motif LDO52_00870 PF03458 UPF0126 domain LDO52_00875 PF07690 Major Facilitator Superfamily LDO52_00880 PF00521 DNA gyrase/topoisomerase IV, subunit A LDO52_00880 PF03989 DNA gyrase C-terminal domain, beta-propeller LDO52_00885 PF13193 AMP-binding enzyme C-terminal domain LDO52_00885 PF00501 AMP-binding enzyme LDO52_00900 PF00719 Inorganic pyrophosphatase LDO52_00905 PF03573 outer membrane porin, OprD family LDO52_00915 PF13335 Magnesium chelatase, subunit ChlI C-terminal LDO52_00915 PF01078 Magnesium chelatase, subunit ChlI LDO52_00925 PF00543 Nitrogen regulatory protein P-II LDO52_00930 PF00909 Ammonium Transporter Family LDO52_00935 PF03477 ATP cone domain LDO52_00940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDO52_00940 PF01872 RibD C-terminal domain LDO52_00950 PF00677 Lumazine binding domain LDO52_00955 PF09335 SNARE associated Golgi protein LDO52_00970 PF00883 Cytosol aminopeptidase family, catalytic domain LDO52_00970 PF02789 Cytosol aminopeptidase family, N-terminal domain LDO52_00975 PF03739 Lipopolysaccharide export system permease LptF/LptG LDO52_00980 PF03739 Lipopolysaccharide export system permease LptF/LptG LDO52_00985 PF01676 Metalloenzyme superfamily LDO52_00985 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LDO52_00990 PF00595 PDZ domain LDO52_00990 PF03572 Peptidase family S41 LDO52_00995 PF00072 Response regulator receiver domain LDO52_00995 PF02954 Bacterial regulatory protein, Fis family LDO52_00995 PF00158 Sigma-54 interaction domain LDO52_01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_01000 PF00512 His Kinase A (phospho-acceptor) domain LDO52_01000 PF00989 PAS fold LDO52_01005 PF00196 Bacterial regulatory proteins, luxR family LDO52_01005 PF00072 Response regulator receiver domain LDO52_01010 PF00768 D-alanyl-D-alanine carboxypeptidase LDO52_01015 PF00291 Pyridoxal-phosphate dependent enzyme LDO52_01020 PF03447 Homoserine dehydrogenase, NAD binding domain LDO52_01020 PF00742 Homoserine dehydrogenase LDO52_01020 PF01842 ACT domain LDO52_01025 PF10411 Disulfide bond isomerase protein N-terminus LDO52_01025 PF13098 Thioredoxin-like domain LDO52_01030 PF02899 Phage integrase, N-terminal SAM-like domain LDO52_01030 PF00589 Phage integrase family LDO52_01040 PF07664 Ferrous iron transport protein B C terminus LDO52_01040 PF07670 Nucleoside recognition LDO52_01040 PF02421 Ferrous iron transport protein B LDO52_01050 PF02875 Mur ligase family, glutamate ligase domain LDO52_01050 PF08245 Mur ligase middle domain LDO52_01055 PF01098 Cell cycle protein LDO52_01065 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDO52_01070 PF01258 Prokaryotic dksA/traR C4-type zinc finger LDO52_01075 PF00149 Calcineurin-like phosphoesterase LDO52_01080 PF00293 NUDIX domain LDO52_01085 PF01964 Radical SAM ThiC family LDO52_01085 PF13667 ThiC-associated domain LDO52_01095 PF02321 Outer membrane efflux protein LDO52_01100 PF01895 PhoU domain LDO52_01105 PF00664 ABC transporter transmembrane region LDO52_01105 PF00005 ABC transporter LDO52_01115 PF03652 Holliday junction resolvase LDO52_01120 PF02622 Uncharacterized ACR, COG1678 LDO52_01125 PF02463 RecF/RecN/SMC N terminal domain LDO52_01130 PF06865 Pyrimidine/purine nucleoside phosphorylase LDO52_01135 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDO52_01135 PF00588 SpoU rRNA Methylase family LDO52_01145 PF01121 Dephospho-CoA kinase LDO52_01150 PF01478 Type IV leader peptidase family LDO52_01150 PF06750 Bacterial Peptidase A24 N-terminal domain LDO52_01160 PF00482 Type II secretion system (T2SS), protein F LDO52_01165 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LDO52_01165 PF00437 Type II/IV secretion system protein LDO52_01170 PF00121 Triosephosphate isomerase LDO52_01175 PF03840 Preprotein translocase SecG subunit LDO52_01205 PF02576 RimP N-terminal domain LDO52_01205 PF17384 RimP C-terminal SH3 domain LDO52_01210 PF13184 NusA-like KH domain LDO52_01210 PF00575 S1 RNA binding domain LDO52_01210 PF08529 NusA N-terminal domain LDO52_01215 PF00009 Elongation factor Tu GTP binding domain LDO52_01215 PF11987 Translation-initiation factor 2 LDO52_01215 PF08364 Bacterial translation initiation factor IF-2 associated region LDO52_01215 PF04760 Translation initiation factor IF-2, N-terminal region LDO52_01220 PF02033 Ribosome-binding factor A LDO52_01225 PF03334 Na+/H+ antiporter subunit LDO52_01230 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LDO52_01235 PF01899 Na+/H+ ion antiporter subunit LDO52_01240 PF00361 Proton-conducting membrane transporter LDO52_01245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LDO52_01250 PF13244 Domain of unknown function (DUF4040) LDO52_01250 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LDO52_01250 PF00361 Proton-conducting membrane transporter LDO52_01250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LDO52_01265 PF01502 Phosphoribosyl-AMP cyclohydrolase LDO52_01270 PF00106 short chain dehydrogenase LDO52_01275 PF01053 Cys/Met metabolism PLP-dependent enzyme LDO52_01280 PF00005 ABC transporter LDO52_01280 PF12848 ABC transporter LDO52_01300 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDO52_01340 PF01795 MraW methylase family LDO52_01350 PF00905 Penicillin binding protein transpeptidase domain LDO52_01350 PF03717 Penicillin-binding Protein dimerisation domain LDO52_01355 PF01225 Mur ligase family, catalytic domain LDO52_01355 PF02875 Mur ligase family, glutamate ligase domain LDO52_01355 PF08245 Mur ligase middle domain LDO52_01360 PF08245 Mur ligase middle domain LDO52_01360 PF01225 Mur ligase family, catalytic domain LDO52_01360 PF02875 Mur ligase family, glutamate ligase domain LDO52_01365 PF00953 Glycosyl transferase family 4 LDO52_01370 PF13847 Methyltransferase domain LDO52_01375 PF17092 Penicillin-binding protein OB-like domain LDO52_01375 PF00905 Penicillin binding protein transpeptidase domain LDO52_01375 PF00912 Transglycosylase LDO52_01380 PF11104 Type IV pilus assembly protein PilM; LDO52_01385 PF05137 Fimbrial assembly protein (PilN) LDO52_01390 PF04350 Pilus assembly protein, PilO LDO52_01400 PF11741 AMIN domain LDO52_01400 PF00263 Bacterial type II and III secretion system protein LDO52_01400 PF03958 Bacterial type II/III secretion system short domain LDO52_01400 PF07660 Secretin and TonB N terminus short domain LDO52_01405 PF01202 Shikimate kinase LDO52_01410 PF01761 3-dehydroquinate synthase LDO52_01425 PF01493 GXGXG motif LDO52_01425 PF01645 Conserved region in glutamate synthase LDO52_01425 PF00310 Glutamine amidotransferases class-II LDO52_01425 PF04898 Glutamate synthase central domain LDO52_01430 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_01430 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LDO52_01435 PF04011 LemA family LDO52_01470 PF03050 Transposase IS66 family LDO52_01470 PF13817 IS66 C-terminal element LDO52_01470 PF13007 Transposase C of IS166 homeodomain LDO52_01470 PF13005 zinc-finger binding domain of transposase IS66 LDO52_01530 PF15864 Protein glycosylation ligase LDO52_01530 PF04932 O-Antigen ligase LDO52_01530 PF11846 Virulence factor membrane-bound polymerase, C-terminal LDO52_01535 PF00210 Ferritin-like domain LDO52_01540 PF04324 BFD-like [2Fe-2S] binding domain LDO52_01545 PF01042 Endoribonuclease L-PSP LDO52_01550 PF02824 TGS domain LDO52_01550 PF13291 ACT domain LDO52_01550 PF04607 Region found in RelA / SpoT proteins LDO52_01555 PF01192 RNA polymerase Rpb6 LDO52_01560 PF00625 Guanylate kinase LDO52_01565 PF02401 LytB protein LDO52_01570 PF00114 Pilin (bacterial filament) LDO52_01570 PF07963 Prokaryotic N-terminal methylation motif LDO52_01590 PF05567 Neisseria PilC beta-propeller domain LDO52_01600 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LDO52_01600 PF07963 Prokaryotic N-terminal methylation motif LDO52_01605 PF00886 Ribosomal protein S16 LDO52_01610 PF05239 PRC-barrel domain LDO52_01610 PF01782 RimM N-terminal domain LDO52_01615 PF01746 tRNA (Guanine-1)-methyltransferase LDO52_01620 PF01245 Ribosomal protein L19 LDO52_01625 PF00561 alpha/beta hydrolase fold LDO52_01630 PF00561 alpha/beta hydrolase fold LDO52_01635 PF00561 alpha/beta hydrolase fold LDO52_01640 PF03280 Proteobacterial lipase chaperone protein LDO52_01645 PF16198 tRNA pseudouridylate synthase B C-terminal domain LDO52_01645 PF09157 Pseudouridine synthase II TruB, C-terminal LDO52_01645 PF01509 TruB family pseudouridylate synthase (N terminal domain) LDO52_01650 PF01925 Sulfite exporter TauE/SafE LDO52_01660 PF00892 EamA-like transporter family LDO52_01670 PF00892 EamA-like transporter family LDO52_01675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDO52_01675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDO52_01685 PF02913 FAD linked oxidases, C-terminal domain LDO52_01685 PF01565 FAD binding domain LDO52_01710 PF07690 Major Facilitator Superfamily LDO52_01730 PF12823 Domain of unknown function (DUF3817) LDO52_01735 PF00080 Copper/zinc superoxide dismutase (SODC) LDO52_01740 PF01594 AI-2E family transporter LDO52_01745 PF13614 AAA domain LDO52_01760 PF01209 ubiE/COQ5 methyltransferase family LDO52_01775 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDO52_01780 PF01197 Ribosomal protein L31 LDO52_01785 PF03109 ABC1 family LDO52_01795 PF01554 MatE LDO52_01805 PF06969 HemN C-terminal domain LDO52_01805 PF04055 Radical SAM superfamily LDO52_01810 PF00313 'Cold-shock' DNA-binding domain LDO52_01815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_01815 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_01815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_01815 PF12806 Acetyl-CoA dehydrogenase C-terminal like LDO52_01820 PF08501 Shikimate dehydrogenase substrate binding domain LDO52_01820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LDO52_01820 PF01488 Shikimate / quinate 5-dehydrogenase LDO52_01830 PF01218 Coproporphyrinogen III oxidase LDO52_01835 PF04055 Radical SAM superfamily LDO52_01835 PF06969 HemN C-terminal domain LDO52_01840 PF00925 GTP cyclohydrolase II LDO52_01845 PF02780 Transketolase, C-terminal domain LDO52_01845 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LDO52_01845 PF02779 Transketolase, pyrimidine binding domain LDO52_01850 PF00459 Inositol monophosphatase family LDO52_01860 PF00271 Helicase conserved C-terminal domain LDO52_01860 PF00270 DEAD/DEAH box helicase LDO52_01865 PF00005 ABC transporter LDO52_01870 PF02405 Permease MlaE LDO52_01875 PF02470 MlaD protein LDO52_01880 PF05494 MlaC protein LDO52_01890 PF01544 CorA-like Mg2+ transporter protein LDO52_01895 PF03641 Possible lysine decarboxylase LDO52_01900 PF00293 NUDIX domain LDO52_01905 PF00156 Phosphoribosyl transferase domain LDO52_01910 PF00270 DEAD/DEAH box helicase LDO52_01910 PF00271 Helicase conserved C-terminal domain LDO52_01910 PF17191 RecG wedge domain LDO52_01920 PF01553 Acyltransferase LDO52_01930 PF00375 Sodium:dicarboxylate symporter family LDO52_01940 PF01926 50S ribosome-binding GTPase LDO52_01945 PF02082 Transcriptional regulator LDO52_01950 PF00175 Oxidoreductase NAD-binding domain LDO52_01950 PF00970 Oxidoreductase FAD-binding domain LDO52_01950 PF00042 Globin LDO52_01955 PF01053 Cys/Met metabolism PLP-dependent enzyme LDO52_01960 PF00117 Glutamine amidotransferase class-I LDO52_01965 PF00338 Ribosomal protein S10p/S20e LDO52_01970 PF00297 Ribosomal protein L3 LDO52_01975 PF00573 Ribosomal protein L4/L1 family LDO52_01980 PF00276 Ribosomal protein L23 LDO52_01985 PF03947 Ribosomal Proteins L2, C-terminal domain LDO52_01985 PF00181 Ribosomal Proteins L2, RNA binding domain LDO52_01990 PF00203 Ribosomal protein S19 LDO52_01995 PF00237 Ribosomal protein L22p/L17e LDO52_02005 PF00252 Ribosomal protein L16p/L10e LDO52_02010 PF00831 Ribosomal L29 protein LDO52_02015 PF00366 Ribosomal protein S17 LDO52_02020 PF00238 Ribosomal protein L14p/L23e LDO52_02025 PF00467 KOW motif LDO52_02025 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LDO52_02030 PF00673 ribosomal L5P family C-terminus LDO52_02030 PF00281 Ribosomal protein L5 LDO52_02035 PF00253 Ribosomal protein S14p/S29e LDO52_02040 PF00410 Ribosomal protein S8 LDO52_02045 PF00347 Ribosomal protein L6 LDO52_02050 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LDO52_02055 PF00333 Ribosomal protein S5, N-terminal domain LDO52_02055 PF03719 Ribosomal protein S5, C-terminal domain LDO52_02060 PF00327 Ribosomal protein L30p/L7e LDO52_02065 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LDO52_02070 PF00344 SecY translocase LDO52_02075 PF00444 Ribosomal protein L36 LDO52_02080 PF00416 Ribosomal protein S13/S18 LDO52_02085 PF00411 Ribosomal protein S11 LDO52_02090 PF01479 S4 domain LDO52_02090 PF00163 Ribosomal protein S4/S9 N-terminal domain LDO52_02095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LDO52_02095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LDO52_02095 PF01000 RNA polymerase Rpb3/RpoA insert domain LDO52_02100 PF01196 Ribosomal protein L17 LDO52_02105 PF00743 Flavin-binding monooxygenase-like LDO52_02110 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_02110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_02110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_02115 PF03937 Flavinator of succinate dehydrogenase LDO52_02150 PF09526 Probable metal-binding protein (DUF2387) LDO52_02155 PF01432 Peptidase family M3 LDO52_02165 PF17876 Cold shock domain LDO52_02165 PF08461 Ribonuclease R winged-helix domain LDO52_02165 PF08206 Ribonuclease B OB domain LDO52_02165 PF00773 RNB domain LDO52_02165 PF00575 S1 RNA binding domain LDO52_02200 PF01557 Fumarylacetoacetate (FAA) hydrolase family LDO52_02210 PF00892 EamA-like transporter family LDO52_02215 PF03631 Virulence factor BrkB LDO52_02220 PF03358 NADPH-dependent FMN reductase LDO52_02240 PF13737 Transposase DDE domain LDO52_02265 PF02130 Uncharacterized protein family UPF0054 LDO52_02270 PF02562 PhoH-like protein LDO52_02275 PF04055 Radical SAM superfamily LDO52_02275 PF01938 TRAM domain LDO52_02275 PF00919 Uncharacterized protein family UPF0004 LDO52_02280 PF01551 Peptidase family M23 LDO52_02280 PF10145 Phage-related minor tail protein LDO52_02280 PF01464 Transglycosylase SLT domain LDO52_02290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LDO52_02290 PF00056 lactate/malate dehydrogenase, NAD binding domain LDO52_02320 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LDO52_02325 PF01066 CDP-alcohol phosphatidyltransferase LDO52_02370 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_02370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDO52_02385 PF04273 Putative phosphatase (DUF442) LDO52_02385 PF00753 Metallo-beta-lactamase superfamily LDO52_02395 PF00085 Thioredoxin LDO52_02400 PF03061 Thioesterase superfamily LDO52_02410 PF04461 Protein of unknown function (DUF520) LDO52_02420 PF01266 FAD dependent oxidoreductase LDO52_02420 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LDO52_02430 PF03795 YCII-related domain LDO52_02435 PF04279 Intracellular septation protein A LDO52_02440 PF02811 PHP domain LDO52_02445 PF01062 Bestrophin, RFP-TM, chloride channel LDO52_02450 PF04002 RadC-like JAB domain LDO52_02455 PF04127 DNA / pantothenate metabolism flavoprotein LDO52_02455 PF02441 Flavoprotein LDO52_02465 PF01207 Dihydrouridine synthase (Dus) LDO52_02475 PF07690 Major Facilitator Superfamily LDO52_02480 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LDO52_02480 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LDO52_02485 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LDO52_02490 PF02233 NAD(P) transhydrogenase beta subunit LDO52_02500 PF01261 Xylose isomerase-like TIM barrel LDO52_02505 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LDO52_02505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDO52_02510 PF00378 Enoyl-CoA hydratase/isomerase LDO52_02515 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LDO52_02515 PF00512 His Kinase A (phospho-acceptor) domain LDO52_02515 PF00072 Response regulator receiver domain LDO52_02515 PF01627 Hpt domain LDO52_02515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_02515 PF00672 HAMP domain LDO52_02520 PF00291 Pyridoxal-phosphate dependent enzyme LDO52_02530 PF05958 tRNA (Uracil-5-)-methyltransferase LDO52_02535 PF13291 ACT domain LDO52_02535 PF04607 Region found in RelA / SpoT proteins LDO52_02535 PF02824 TGS domain LDO52_02545 PF07549 SecD/SecF GG Motif LDO52_02545 PF02355 Protein export membrane protein LDO52_02550 PF07549 SecD/SecF GG Motif LDO52_02550 PF13721 SecD export protein N-terminal TM region LDO52_02550 PF02355 Protein export membrane protein LDO52_02555 PF02699 Preprotein translocase subunit LDO52_02560 PF01702 Queuine tRNA-ribosyltransferase LDO52_02570 PF04011 LemA family LDO52_02580 PF02547 Queuosine biosynthesis protein LDO52_02590 PF03971 Monomeric isocitrate dehydrogenase LDO52_02620 PF00290 Tryptophan synthase alpha chain LDO52_02625 PF01039 Carboxyl transferase domain LDO52_02630 PF08245 Mur ligase middle domain LDO52_02630 PF02875 Mur ligase family, glutamate ligase domain LDO52_02640 PF10417 C-terminal domain of 1-Cys peroxiredoxin LDO52_02640 PF00578 AhpC/TSA family LDO52_02645 PF07516 SecA Wing and Scaffold domain LDO52_02645 PF02810 SEC-C motif LDO52_02645 PF07517 SecA DEAD-like domain LDO52_02645 PF01043 SecA preprotein cross-linking domain LDO52_02655 PF01960 ArgJ family LDO52_02660 PF02445 Quinolinate synthetase A protein LDO52_02715 PF04386 Stringent starvation protein B LDO52_02720 PF02798 Glutathione S-transferase, N-terminal domain LDO52_02720 PF00043 Glutathione S-transferase, C-terminal domain LDO52_02725 PF00380 Ribosomal protein S9/S16 LDO52_02730 PF00572 Ribosomal protein L13 LDO52_02735 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LDO52_02740 PF00398 Ribosomal RNA adenine dimethylase LDO52_02745 PF00149 Calcineurin-like phosphoesterase LDO52_02785 PF16360 GTP-binding GTPase Middle Region LDO52_02785 PF13167 GTP-binding GTPase N-terminal LDO52_02785 PF01926 50S ribosome-binding GTPase LDO52_02795 PF13091 PLD-like domain LDO52_02800 PF10518 TAT (twin-arginine translocation) pathway signal sequence LDO52_02800 PF00149 Calcineurin-like phosphoesterase LDO52_02810 PF00083 Sugar (and other) transporter LDO52_02810 PF07690 Major Facilitator Superfamily LDO52_02815 PF03006 Haemolysin-III related LDO52_02835 PF00378 Enoyl-CoA hydratase/isomerase LDO52_02835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDO52_02835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDO52_02840 PF02803 Thiolase, C-terminal domain LDO52_02840 PF00108 Thiolase, N-terminal domain LDO52_02845 PF02311 AraC-like ligand binding domain LDO52_02845 PF12833 Helix-turn-helix domain LDO52_02850 PF02515 CoA-transferase family III LDO52_02855 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDO52_02855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDO52_02865 PF01113 Dihydrodipicolinate reductase, N-terminus LDO52_02865 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain LDO52_02870 PF02803 Thiolase, C-terminal domain LDO52_02870 PF00108 Thiolase, N-terminal domain LDO52_02875 PF00114 Pilin (bacterial filament) LDO52_02875 PF07963 Prokaryotic N-terminal methylation motif LDO52_02880 PF13505 Outer membrane protein beta-barrel domain LDO52_02880 PF00691 OmpA family LDO52_02890 PF00324 Amino acid permease LDO52_02895 PF05175 Methyltransferase small domain LDO52_02895 PF08468 Methyltransferase small domain N-terminal LDO52_02900 PF00860 Permease family LDO52_02905 PF00679 Elongation factor G C-terminus LDO52_02905 PF00009 Elongation factor Tu GTP binding domain LDO52_02905 PF03144 Elongation factor Tu domain 2 LDO52_02910 PF01741 Large-conductance mechanosensitive channel, MscL LDO52_02915 PF00639 PPIC-type PPIASE domain LDO52_02915 PF09312 SurA N-terminal domain LDO52_02920 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LDO52_02920 PF06827 Zinc finger found in FPG and IleRS LDO52_02920 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LDO52_02925 PF04966 Carbohydrate-selective porin, OprB family LDO52_02930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO52_02955 PF01571 Aminomethyltransferase folate-binding domain LDO52_02960 PF07731 Multicopper oxidase LDO52_02960 PF07732 Multicopper oxidase LDO52_02965 PF00330 Aconitase family (aconitate hydratase) LDO52_02965 PF00694 Aconitase C-terminal domain LDO52_03005 PF00849 RNA pseudouridylate synthase LDO52_03035 PF03831 PhnA domain LDO52_03035 PF08274 PhnA Zinc-Ribbon LDO52_03060 PF08543 Phosphomethylpyrimidine kinase LDO52_03060 PF03070 TENA/THI-4/PQQC family LDO52_03060 PF02581 Thiamine monophosphate synthase LDO52_03065 PF13419 Haloacid dehalogenase-like hydrolase LDO52_03075 PF05656 Protein of unknown function (DUF805) LDO52_03085 PF00268 Ribonucleotide reductase, small chain LDO52_03090 PF03477 ATP cone domain LDO52_03090 PF02867 Ribonucleotide reductase, barrel domain LDO52_03090 PF00317 Ribonucleotide reductase, all-alpha domain LDO52_03095 PF00072 Response regulator receiver domain LDO52_03095 PF00486 Transcriptional regulatory protein, C terminal LDO52_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_03100 PF00672 HAMP domain LDO52_03100 PF00512 His Kinase A (phospho-acceptor) domain LDO52_03110 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LDO52_03115 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LDO52_03120 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LDO52_03120 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LDO52_03130 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LDO52_03130 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LDO52_03130 PF10531 SLBB domain LDO52_03135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LDO52_03135 PF00384 Molybdopterin oxidoreductase LDO52_03135 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LDO52_03140 PF00146 NADH dehydrogenase LDO52_03145 PF12838 4Fe-4S dicluster domain LDO52_03150 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LDO52_03155 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LDO52_03160 PF00361 Proton-conducting membrane transporter LDO52_03160 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LDO52_03165 PF00361 Proton-conducting membrane transporter LDO52_03170 PF00361 Proton-conducting membrane transporter LDO52_03190 PF00313 'Cold-shock' DNA-binding domain LDO52_03195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_03195 PF03466 LysR substrate binding domain LDO52_03200 PF00970 Oxidoreductase FAD-binding domain LDO52_03200 PF00175 Oxidoreductase NAD-binding domain LDO52_03205 PF00005 ABC transporter LDO52_03210 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_03215 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_03220 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDO52_03230 PF13737 Transposase DDE domain LDO52_03240 PF05552 Conserved TM helix LDO52_03265 PF00291 Pyridoxal-phosphate dependent enzyme LDO52_03280 PF00753 Metallo-beta-lactamase superfamily LDO52_03290 PF13737 Transposase DDE domain LDO52_03300 PF09334 tRNA synthetases class I (M) LDO52_03300 PF01588 Putative tRNA binding domain LDO52_03315 PF10609 NUBPL iron-transfer P-loop NTPase LDO52_03325 PF00692 dUTPase LDO52_03350 PF04073 Aminoacyl-tRNA editing domain LDO52_03350 PF03129 Anticodon binding domain LDO52_03350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDO52_03355 PF00873 AcrB/AcrD/AcrF family LDO52_03360 PF13533 Biotin-lipoyl like LDO52_03370 PF00072 Response regulator receiver domain LDO52_03375 PF00072 Response regulator receiver domain LDO52_03380 PF01584 CheW-like domain LDO52_03385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LDO52_03385 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LDO52_03390 PF00072 Response regulator receiver domain LDO52_03390 PF01627 Hpt domain LDO52_03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_03390 PF01584 CheW-like domain LDO52_03400 PF07687 Peptidase dimerisation domain LDO52_03400 PF01546 Peptidase family M20/M25/M40 LDO52_03415 PF04304 Protein of unknown function (DUF454) LDO52_03475 PF00667 FAD binding domain LDO52_03475 PF00258 Flavodoxin LDO52_03475 PF00175 Oxidoreductase NAD-binding domain LDO52_03485 PF12805 FUSC-like inner membrane protein yccS LDO52_03490 PF07690 Major Facilitator Superfamily LDO52_03495 PF00881 Nitroreductase family LDO52_03500 PF03616 Sodium/glutamate symporter LDO52_03505 PF01235 Sodium:alanine symporter family LDO52_03510 PF02417 Chromate transporter LDO52_03515 PF01734 Patatin-like phospholipase LDO52_03525 PF03061 Thioesterase superfamily LDO52_03530 PF16859 Tetracyclin repressor-like, C-terminal domain LDO52_03530 PF00440 Bacterial regulatory proteins, tetR family LDO52_03535 PF07690 Major Facilitator Superfamily LDO52_03540 PF03466 LysR substrate binding domain LDO52_03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_03550 PF01494 FAD binding domain LDO52_03560 PF02492 CobW/HypB/UreG, nucleotide-binding domain LDO52_03560 PF07683 Cobalamin synthesis protein cobW C-terminal domain LDO52_03565 PF07152 YaeQ protein LDO52_03570 PF02308 MgtC family LDO52_03575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO52_03580 PF00990 Diguanylate cyclase, GGDEF domain LDO52_03580 PF00360 Phytochrome region LDO52_03580 PF01590 GAF domain LDO52_03580 PF00563 EAL domain LDO52_03610 PF01906 Putative heavy-metal-binding LDO52_03615 PF01906 Putative heavy-metal-binding LDO52_03620 PF02321 Outer membrane efflux protein LDO52_03625 PF00873 AcrB/AcrD/AcrF family LDO52_03630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO52_03630 PF00529 HlyD membrane-fusion protein of T1SS LDO52_03635 PF01569 PAP2 superfamily LDO52_03645 PF00348 Polyprenyl synthetase LDO52_03650 PF00829 Ribosomal prokaryotic L21 protein LDO52_03655 PF01016 Ribosomal L27 protein LDO52_03660 PF03548 Outer membrane lipoprotein carrier protein LolA LDO52_03680 PF02403 Seryl-tRNA synthetase N-terminal domain LDO52_03680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDO52_03685 PF10414 Sirohaem synthase dimerisation region LDO52_03685 PF14824 Sirohaem biosynthesis protein central LDO52_03685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDO52_03690 PF00588 SpoU rRNA Methylase family LDO52_03700 PF13520 Amino acid permease LDO52_03705 PF00465 Iron-containing alcohol dehydrogenase LDO52_03715 PF03099 Biotin/lipoate A/B protein ligase family LDO52_03720 PF04359 Protein of unknown function (DUF493) LDO52_03725 PF04546 Sigma-70, non-essential region LDO52_03725 PF03979 Sigma-70 factor, region 1.1 LDO52_03725 PF00140 Sigma-70 factor, region 1.2 LDO52_03725 PF04542 Sigma-70 region 2 LDO52_03725 PF04539 Sigma-70 region 3 LDO52_03725 PF04545 Sigma-70, region 4 LDO52_03745 PF09335 SNARE associated Golgi protein LDO52_03755 PF17773 UPF0176 acylphosphatase like domain LDO52_03755 PF00581 Rhodanese-like domain LDO52_03780 PF02261 Aspartate decarboxylase LDO52_03785 PF01195 Peptidyl-tRNA hydrolase LDO52_03790 PF01386 Ribosomal L25p family LDO52_03795 PF14572 Phosphoribosyl synthetase-associated domain LDO52_03795 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LDO52_03820 PF08544 GHMP kinases C terminal LDO52_03820 PF00288 GHMP kinases N terminal domain LDO52_03825 PF03550 Outer membrane lipoprotein LolB LDO52_03835 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LDO52_03835 PF01488 Shikimate / quinate 5-dehydrogenase LDO52_03835 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LDO52_03840 PF01807 CHC2 zinc finger LDO52_03840 PF10410 DnaB-helicase binding domain of primase LDO52_03840 PF08278 DNA primase DnaG DnaB-binding LDO52_03840 PF08275 DNA primase catalytic core, N-terminal domain LDO52_03845 PF13525 Outer membrane lipoprotein LDO52_03850 PF01479 S4 domain LDO52_03850 PF00849 RNA pseudouridylate synthase LDO52_03855 PF02578 Multi-copper polyphenol oxidoreductase laccase LDO52_03860 PF03358 NADPH-dependent FMN reductase LDO52_03865 PF01668 SmpB protein LDO52_03870 PF01467 Cytidylyltransferase-like LDO52_03875 PF00037 4Fe-4S binding domain LDO52_03895 PF00132 Bacterial transferase hexapeptide (six repeats) LDO52_03900 PF01042 Endoribonuclease L-PSP LDO52_03905 PF00440 Bacterial regulatory proteins, tetR family LDO52_03910 PF01272 Transcription elongation factor, GreA/GreB, C-term LDO52_03910 PF03449 Transcription elongation factor, N-terminal LDO52_03915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDO52_03915 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LDO52_03915 PF02142 MGS-like domain LDO52_03920 PF00117 Glutamine amidotransferase class-I LDO52_03920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDO52_03940 PF01985 CRS1 / YhbY (CRM) domain LDO52_03945 PF01728 FtsJ-like methyltransferase LDO52_03950 PF01434 Peptidase family M41 LDO52_03950 PF00004 ATPase family associated with various cellular activities (AAA) LDO52_03950 PF06480 FtsH Extracellular LDO52_03950 PF17862 AAA+ lid domain LDO52_03955 PF00809 Pterin binding enzyme LDO52_03990 PF01595 Cyclin M transmembrane N-terminal domain LDO52_03990 PF03471 Transporter associated domain LDO52_03990 PF00571 CBS domain LDO52_03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_03995 PF03466 LysR substrate binding domain LDO52_04000 PF00463 Isocitrate lyase family LDO52_04005 PF00873 AcrB/AcrD/AcrF family LDO52_04010 PF01769 Divalent cation transporter LDO52_04010 PF03448 MgtE intracellular N domain LDO52_04010 PF00571 CBS domain LDO52_04020 PF01435 Peptidase family M48 LDO52_04025 PF10145 Phage-related minor tail protein LDO52_04025 PF01464 Transglycosylase SLT domain LDO52_04025 PF01551 Peptidase family M23 LDO52_04030 PF01171 PP-loop family LDO52_04040 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDO52_04040 PF01464 Transglycosylase SLT domain LDO52_04045 PF03449 Transcription elongation factor, N-terminal LDO52_04045 PF01272 Transcription elongation factor, GreA/GreB, C-term LDO52_04060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDO52_04060 PF11890 Domain of unknown function (DUF3410) LDO52_04060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDO52_04065 PF00152 tRNA synthetases class II (D, K and N) LDO52_04070 PF01743 Poly A polymerase head domain LDO52_04070 PF12627 Probable RNA and SrmB- binding site of polymerase A LDO52_04075 PF00390 Malic enzyme, N-terminal domain LDO52_04075 PF03949 Malic enzyme, NAD binding domain LDO52_04075 PF01515 Phosphate acetyl/butaryl transferase LDO52_04080 PF00563 EAL domain LDO52_04080 PF00498 FHA domain LDO52_04080 PF00990 Diguanylate cyclase, GGDEF domain LDO52_04085 PF04452 RNA methyltransferase LDO52_04090 PF02219 Methylenetetrahydrofolate reductase LDO52_04095 PF05221 S-adenosyl-L-homocysteine hydrolase LDO52_04095 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LDO52_04135 PF18073 Rubredoxin metal binding domain LDO52_04145 PF01235 Sodium:alanine symporter family LDO52_04150 PF00324 Amino acid permease LDO52_04160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LDO52_04160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDO52_04165 PF01678 Diaminopimelate epimerase LDO52_04170 PF00561 alpha/beta hydrolase fold LDO52_04175 PF02899 Phage integrase, N-terminal SAM-like domain LDO52_04175 PF00589 Phage integrase family LDO52_04185 PF01037 Lrp/AsnC ligand binding domain LDO52_04190 PF01810 LysE type translocator LDO52_04195 PF01012 Electron transfer flavoprotein domain LDO52_04200 PF01012 Electron transfer flavoprotein domain LDO52_04200 PF00766 Electron transfer flavoprotein FAD-binding domain LDO52_04210 PF03989 DNA gyrase C-terminal domain, beta-propeller LDO52_04210 PF00521 DNA gyrase/topoisomerase IV, subunit A LDO52_04230 PF13533 Biotin-lipoyl like LDO52_04240 PF00266 Aminotransferase class-V LDO52_04250 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LDO52_04265 PF02687 FtsX-like permease family LDO52_04265 PF12704 MacB-like periplasmic core domain LDO52_04270 PF00005 ABC transporter LDO52_04275 PF03772 Competence protein LDO52_04275 PF13567 Domain of unknown function (DUF4131) LDO52_04275 PF00753 Metallo-beta-lactamase superfamily LDO52_04285 PF06965 Na+/H+ antiporter 1 LDO52_04285 PF01343 Peptidase family S49 LDO52_04290 PF00561 alpha/beta hydrolase fold LDO52_04290 PF08386 TAP-like protein LDO52_04295 PF00551 Formyl transferase LDO52_04300 PF00586 AIR synthase related protein, N-terminal domain LDO52_04300 PF02769 AIR synthase related protein, C-terminal domain LDO52_04305 PF01594 AI-2E family transporter LDO52_04310 PF00308 Bacterial dnaA protein LDO52_04310 PF11638 DnaA N-terminal domain LDO52_04310 PF08299 Bacterial dnaA protein helix-turn-helix LDO52_04340 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDO52_04340 PF00588 SpoU rRNA Methylase family LDO52_04345 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LDO52_04355 PF00691 OmpA family LDO52_04360 PF07676 WD40-like Beta Propeller Repeat LDO52_04360 PF04052 TolB amino-terminal domain LDO52_04370 PF02472 Biopolymer transport protein ExbD/TolR LDO52_04375 PF01618 MotA/TolQ/ExbB proton channel family LDO52_04380 PF03061 Thioesterase superfamily LDO52_04385 PF01546 Peptidase family M20/M25/M40 LDO52_04385 PF07687 Peptidase dimerisation domain LDO52_04400 PF17864 RuvB AAA lid domain LDO52_04400 PF05491 RuvB C-terminal winged helix domain LDO52_04400 PF05496 Holliday junction DNA helicase RuvB P-loop domain LDO52_04405 PF07499 RuvA, C-terminal domain LDO52_04405 PF01330 RuvA N terminal domain LDO52_04410 PF01966 HD domain LDO52_04425 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LDO52_04425 PF02769 AIR synthase related protein, C-terminal domain LDO52_04425 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LDO52_04435 PF01494 FAD binding domain LDO52_04440 PF03466 LysR substrate binding domain LDO52_04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_04445 PF01784 NIF3 (NGG1p interacting factor 3) LDO52_04450 PF03055 Retinal pigment epithelial membrane protein LDO52_04455 PF00881 Nitroreductase family LDO52_04460 PF00378 Enoyl-CoA hydratase/isomerase LDO52_04465 PF00293 NUDIX domain LDO52_04465 PF01467 Cytidylyltransferase-like LDO52_04470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_04470 PF03466 LysR substrate binding domain LDO52_04475 PF01810 LysE type translocator LDO52_04485 PF04264 YceI-like domain LDO52_04490 PF00578 AhpC/TSA family LDO52_04500 PF06508 Queuosine biosynthesis protein QueC LDO52_04505 PF04055 Radical SAM superfamily LDO52_04510 PF00132 Bacterial transferase hexapeptide (six repeats) LDO52_04510 PF14602 Hexapeptide repeat of succinyl-transferase LDO52_04510 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LDO52_04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_04525 PF03466 LysR substrate binding domain LDO52_04530 PF00005 ABC transporter LDO52_04530 PF12857 TOBE-like domain LDO52_04535 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_04540 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_04565 PF02618 YceG-like family LDO52_04595 PF13359 DDE superfamily endonuclease LDO52_04595 PF13613 Helix-turn-helix of DDE superfamily endonuclease LDO52_04610 PF01381 Helix-turn-helix LDO52_04625 PF02384 N-6 DNA Methylase LDO52_04625 PF12161 HsdM N-terminal domain LDO52_04630 PF01420 Type I restriction modification DNA specificity domain LDO52_04635 PF08463 EcoEI R protein C-terminal LDO52_04635 PF00271 Helicase conserved C-terminal domain LDO52_04635 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LDO52_04635 PF04851 Type III restriction enzyme, res subunit LDO52_04660 PF01022 Bacterial regulatory protein, arsR family LDO52_04670 PF01758 Sodium Bile acid symporter family LDO52_04675 PF03358 NADPH-dependent FMN reductase LDO52_04715 PF00890 FAD binding domain LDO52_04715 PF02910 Fumarate reductase flavoprotein C-term LDO52_04720 PF13180 PDZ domain LDO52_04730 PF00679 Elongation factor G C-terminus LDO52_04730 PF00009 Elongation factor Tu GTP binding domain LDO52_04730 PF03144 Elongation factor Tu domain 2 LDO52_04730 PF06421 GTP-binding protein LepA C-terminus LDO52_04735 PF10502 Signal peptidase, peptidase S26 LDO52_04745 PF00035 Double-stranded RNA binding motif LDO52_04745 PF14622 Ribonuclease-III-like LDO52_04750 PF07650 KH domain LDO52_04750 PF01926 50S ribosome-binding GTPase LDO52_04760 PF11967 Recombination protein O N terminal LDO52_04760 PF02565 Recombination protein O C terminal LDO52_04765 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LDO52_04770 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LDO52_04795 PF00155 Aminotransferase class I and II LDO52_04800 PF00557 Metallopeptidase family M24 LDO52_04805 PF00318 Ribosomal protein S2 LDO52_04810 PF00889 Elongation factor TS LDO52_04825 PF03330 Lytic transglycolase LDO52_04825 PF05036 Sporulation related domain LDO52_04830 PF13406 Transglycosylase SLT domain LDO52_04840 PF14489 QueF-like protein LDO52_04840 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LDO52_04845 PF01061 ABC-2 type transporter LDO52_04850 PF00005 ABC transporter LDO52_04860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_04860 PF03466 LysR substrate binding domain LDO52_04890 PF00464 Serine hydroxymethyltransferase LDO52_04895 PF14760 Rnk N-terminus LDO52_04895 PF01272 Transcription elongation factor, GreA/GreB, C-term LDO52_04905 PF05816 Toxic anion resistance protein (TelA) LDO52_04915 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_04915 PF13192 Thioredoxin domain LDO52_04920 PF00037 4Fe-4S binding domain LDO52_04925 PF01136 Peptidase family U32 LDO52_04925 PF16325 Peptidase family U32 C-terminal domain LDO52_04930 PF13411 MerR HTH family regulatory protein LDO52_04950 PF00175 Oxidoreductase NAD-binding domain LDO52_04950 PF00970 Oxidoreductase FAD-binding domain LDO52_04955 PF01980 tRNA-methyltransferase O LDO52_04955 PF18389 TrmO C-terminal domain LDO52_04965 PF00437 Type II/IV secretion system protein LDO52_04965 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LDO52_04975 PF00072 Response regulator receiver domain LDO52_04975 PF00486 Transcriptional regulatory protein, C terminal LDO52_04980 PF00512 His Kinase A (phospho-acceptor) domain LDO52_04980 PF08521 Two-component sensor kinase N-terminal LDO52_04980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_04990 PF00293 NUDIX domain LDO52_05000 PF00912 Transglycosylase LDO52_05000 PF00905 Penicillin binding protein transpeptidase domain LDO52_05000 PF14814 Bifunctional transglycosylase second domain LDO52_05005 PF01513 ATP-NAD kinase LDO52_05010 PF07023 Protein of unknown function (DUF1315) LDO52_05015 PF00591 Glycosyl transferase family, a/b domain LDO52_05015 PF02885 Glycosyl transferase family, helical bundle domain LDO52_05020 PF00375 Sodium:dicarboxylate symporter family LDO52_05025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_05025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_05025 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_05030 PF01965 DJ-1/PfpI family LDO52_05035 PF01842 ACT domain LDO52_05035 PF00800 Prephenate dehydratase LDO52_05035 PF01817 Chorismate mutase type II LDO52_05040 PF00155 Aminotransferase class I and II LDO52_05045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDO52_05065 PF03883 Peroxide stress protein YaaA LDO52_05075 PF00860 Permease family LDO52_05080 PF00962 Adenosine/AMP deaminase LDO52_05100 PF01351 Ribonuclease HII LDO52_05105 PF02599 Global regulator protein family LDO52_05110 PF13840 ACT domain LDO52_05110 PF01842 ACT domain LDO52_05110 PF00696 Amino acid kinase family LDO52_05115 PF01411 tRNA synthetases class II (A) LDO52_05115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDO52_05115 PF02272 DHHA1 domain LDO52_05120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDO52_05120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDO52_05135 PF03591 AzlC protein LDO52_05140 PF01037 Lrp/AsnC ligand binding domain LDO52_05145 PF13393 Histidyl-tRNA synthetase LDO52_05150 PF00709 Adenylosuccinate synthetase LDO52_05165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO52_05170 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_05175 PF00768 D-alanyl-D-alanine carboxypeptidase LDO52_05190 PF00576 HIUase/Transthyretin family LDO52_05195 PF03928 Haem-degrading LDO52_05200 PF00486 Transcriptional regulatory protein, C terminal LDO52_05200 PF00072 Response regulator receiver domain LDO52_05205 PF00512 His Kinase A (phospho-acceptor) domain LDO52_05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_05205 PF00672 HAMP domain LDO52_05210 PF00849 RNA pseudouridylate synthase LDO52_05230 PF00155 Aminotransferase class I and II LDO52_05235 PF01641 SelR domain LDO52_05240 PF00255 Glutathione peroxidase LDO52_05245 PF00155 Aminotransferase class I and II LDO52_05250 PF08335 GlnD PII-uridylyltransferase LDO52_05250 PF01909 Nucleotidyltransferase domain LDO52_05250 PF01966 HD domain LDO52_05255 PF02222 ATP-grasp domain LDO52_05260 PF05437 Branched-chain amino acid transport protein (AzlD) LDO52_05265 PF03591 AzlC protein LDO52_05275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LDO52_05275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LDO52_05280 PF01926 50S ribosome-binding GTPase LDO52_05280 PF06071 Protein of unknown function (DUF933) LDO52_05300 PF01709 Transcriptional regulator LDO52_05305 PF01553 Acyltransferase LDO52_05360 PF03050 Transposase IS66 family LDO52_05360 PF13817 IS66 C-terminal element LDO52_05360 PF13007 Transposase C of IS166 homeodomain LDO52_05360 PF13005 zinc-finger binding domain of transposase IS66 LDO52_05380 PF08241 Methyltransferase domain LDO52_05430 PF12419 SNF2 Helicase protein LDO52_05430 PF00271 Helicase conserved C-terminal domain LDO52_05430 PF00176 SNF2 family N-terminal domain LDO52_05445 PF00092 von Willebrand factor type A domain LDO52_05465 PF00005 ABC transporter LDO52_05525 PF02661 Fic/DOC family LDO52_05525 PF13784 Fic/DOC family N-terminal LDO52_05530 PF13356 Arm DNA-binding domain LDO52_05530 PF00589 Phage integrase family LDO52_05545 PF04055 Radical SAM superfamily LDO52_05545 PF06968 Biotin and Thiamin Synthesis associated domain LDO52_05555 PF08331 Domain of unknown function (DUF1730) LDO52_05560 PF03853 YjeF-related protein N-terminus LDO52_05560 PF01256 Carbohydrate kinase LDO52_05565 PF00708 Acylphosphatase LDO52_05570 PF02075 Crossover junction endodeoxyribonuclease RuvC LDO52_05580 PF01810 LysE type translocator LDO52_05595 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_05595 PF13192 Thioredoxin domain LDO52_05615 PF10417 C-terminal domain of 1-Cys peroxiredoxin LDO52_05615 PF00578 AhpC/TSA family LDO52_05620 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LDO52_05620 PF00270 DEAD/DEAH box helicase LDO52_05620 PF00271 Helicase conserved C-terminal domain LDO52_05620 PF11898 Domain of unknown function (DUF3418) LDO52_05620 PF04408 Helicase associated domain (HA2) LDO52_05625 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDO52_05625 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDO52_05640 PF14493 Helix-turn-helix domain LDO52_05640 PF05970 PIF1-like helicase LDO52_05650 PF04284 Protein of unknown function (DUF441) LDO52_05655 PF01479 S4 domain LDO52_05655 PF00849 RNA pseudouridylate synthase LDO52_05670 PF00849 RNA pseudouridylate synthase LDO52_05670 PF01479 S4 domain LDO52_05675 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LDO52_05680 PF08676 MutL C terminal dimerisation domain LDO52_05680 PF01119 DNA mismatch repair protein, C-terminal domain LDO52_05690 PF17209 Hfq protein LDO52_05695 PF00639 PPIC-type PPIASE domain LDO52_05695 PF09312 SurA N-terminal domain LDO52_05700 PF04453 LPS transport system D LDO52_05700 PF03968 OstA-like protein LDO52_05705 PF01636 Phosphotransferase enzyme family LDO52_05710 PF00483 Nucleotidyl transferase LDO52_05715 PF02527 rRNA small subunit methyltransferase G LDO52_05720 PF13614 AAA domain LDO52_05725 PF17762 HTH domain found in ParB protein LDO52_05725 PF02195 ParB-like nuclease domain LDO52_05730 PF01618 MotA/TolQ/ExbB proton channel family LDO52_05740 PF00664 ABC transporter transmembrane region LDO52_05740 PF00005 ABC transporter LDO52_05745 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LDO52_05750 PF02348 Cytidylyltransferase LDO52_05755 PF09115 DNA polymerase III, delta subunit, C terminal LDO52_05765 PF01026 TatD related DNase LDO52_05770 PF00440 Bacterial regulatory proteins, tetR family LDO52_05775 PF12019 Type II transport protein GspH LDO52_05780 PF02501 Type II secretion system (T2SS), protein I LDO52_05780 PF07963 Prokaryotic N-terminal methylation motif LDO52_05785 PF07963 Prokaryotic N-terminal methylation motif LDO52_05785 PF11612 Type II secretion system (T2SS), protein J LDO52_05790 PF03934 Type II secretion system (T2SS), protein K LDO52_05800 PF03167 Uracil DNA glycosylase superfamily LDO52_05810 PF14437 MafB19-like deaminase LDO52_05820 PF02224 Cytidylate kinase LDO52_05825 PF00575 S1 RNA binding domain LDO52_05830 PF00216 Bacterial DNA-binding protein LDO52_05840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LDO52_05850 PF03956 Lysine exporter LysO LDO52_05855 PF00743 Flavin-binding monooxygenase-like LDO52_05865 PF03969 AFG1-like ATPase LDO52_05870 PF01274 Malate synthase LDO52_05875 PF00171 Aldehyde dehydrogenase family LDO52_05890 PF03741 Integral membrane protein TerC family LDO52_05890 PF03471 Transporter associated domain LDO52_05895 PF02110 Hydroxyethylthiazole kinase family LDO52_05910 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LDO52_05910 PF11940 Domain of unknown function (DUF3458) Ig-like fold LDO52_05910 PF01433 Peptidase family M1 domain LDO52_05920 PF00582 Universal stress protein family LDO52_05925 PF00582 Universal stress protein family LDO52_05930 PF00135 Carboxylesterase family LDO52_05935 PF00893 Small Multidrug Resistance protein LDO52_05940 PF03594 Benzoate membrane transport protein LDO52_05945 PF01810 LysE type translocator LDO52_05950 PF00923 Transaldolase/Fructose-6-phosphate aldolase LDO52_05955 PF03466 LysR substrate binding domain LDO52_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_05970 PF00108 Thiolase, N-terminal domain LDO52_05970 PF02803 Thiolase, C-terminal domain LDO52_05985 PF00144 Beta-lactamase LDO52_05995 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LDO52_05995 PF12170 DNA polymerase III tau subunit V interacting with alpha LDO52_05995 PF12169 DNA polymerase III subunits gamma and tau domain III LDO52_06000 PF03061 Thioesterase superfamily LDO52_06005 PF00465 Iron-containing alcohol dehydrogenase LDO52_06010 PF01451 Low molecular weight phosphotyrosine protein phosphatase LDO52_06015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LDO52_06015 PF01565 FAD binding domain LDO52_06030 PF01645 Conserved region in glutamate synthase LDO52_06040 PF14403 Circularly permuted ATP-grasp type 2 LDO52_06050 PF01841 Transglutaminase-like superfamily LDO52_06050 PF08379 Bacterial transglutaminase-like N-terminal region LDO52_06065 PF01168 Alanine racemase, N-terminal domain LDO52_06065 PF00842 Alanine racemase, C-terminal domain LDO52_06070 PF00772 DnaB-like helicase N terminal domain LDO52_06070 PF03796 DnaB-like helicase C terminal domain LDO52_06075 PF01281 Ribosomal protein L9, N-terminal domain LDO52_06075 PF03948 Ribosomal protein L9, C-terminal domain LDO52_06080 PF01084 Ribosomal protein S18 LDO52_06085 PF01250 Ribosomal protein S6 LDO52_06090 PF01040 UbiA prenyltransferase family LDO52_06095 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LDO52_06100 PF00510 Cytochrome c oxidase subunit III LDO52_06105 PF00115 Cytochrome C and Quinol oxidase polypeptide I LDO52_06110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LDO52_06110 PF06481 COX Aromatic Rich Motif LDO52_06120 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LDO52_06120 PF02896 PEP-utilising enzyme, TIM barrel domain LDO52_06120 PF00391 PEP-utilising enzyme, mobile domain LDO52_06125 PF03618 Kinase/pyrophosphorylase LDO52_06130 PF00743 Flavin-binding monooxygenase-like LDO52_06135 PF00296 Luciferase-like monooxygenase LDO52_06150 PF03462 PCRF domain LDO52_06150 PF00472 RF-1 domain LDO52_06155 PF17827 PrmC N-terminal domain LDO52_06155 PF13847 Methyltransferase domain LDO52_06170 PF00106 short chain dehydrogenase LDO52_06175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_06175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_06175 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_06180 PF13193 AMP-binding enzyme C-terminal domain LDO52_06180 PF00501 AMP-binding enzyme LDO52_06190 PF00899 ThiF family LDO52_06195 PF03109 ABC1 family LDO52_06200 PF02152 Dihydroneopterin aldolase LDO52_06220 PF03232 Ubiquinone biosynthesis protein COQ7 LDO52_06225 PF07690 Major Facilitator Superfamily LDO52_06230 PF07244 Surface antigen variable number repeat LDO52_06230 PF01103 Surface antigen LDO52_06230 PF17243 POTRA domain TamA domain 1 LDO52_06255 PF02601 Exonuclease VII, large subunit LDO52_06255 PF13742 OB-fold nucleic acid binding domain LDO52_06280 PF00330 Aconitase family (aconitate hydratase) LDO52_06280 PF06434 Aconitate hydratase 2 N-terminus LDO52_06280 PF11791 Aconitate B N-terminal domain LDO52_06295 PF03616 Sodium/glutamate symporter LDO52_06315 PF05525 Branched-chain amino acid transport protein LDO52_06320 PF00557 Metallopeptidase family M24 LDO52_06325 PF03466 LysR substrate binding domain LDO52_06325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_06335 PF02146 Sir2 family LDO52_06370 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_06370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO52_06390 PF00117 Glutamine amidotransferase class-I LDO52_06390 PF06418 CTP synthase N-terminus LDO52_06395 PF00793 DAHP synthetase I family LDO52_06400 PF00113 Enolase, C-terminal TIM barrel domain LDO52_06400 PF03952 Enolase, N-terminal domain LDO52_06405 PF04977 Septum formation initiator LDO52_06410 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LDO52_06415 PF01098 Cell cycle protein LDO52_06425 PF08173 Membrane bound YbgT-like protein LDO52_06430 PF02322 Cytochrome bd terminal oxidase subunit II LDO52_06435 PF01654 Cytochrome bd terminal oxidase subunit I LDO52_06445 PF00267 Gram-negative porin LDO52_06450 PF01230 HIT domain LDO52_06460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDO52_06460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LDO52_06470 PF01053 Cys/Met metabolism PLP-dependent enzyme LDO52_06475 PF02575 YbaB/EbfC DNA-binding family LDO52_06480 PF02132 RecR protein LDO52_06480 PF13662 Toprim domain LDO52_06485 PF00570 HRDC domain LDO52_06485 PF01612 3'-5' exonuclease LDO52_06490 PF05166 YcgL domain LDO52_06500 PF01434 Peptidase family M41 LDO52_06500 PF17862 AAA+ lid domain LDO52_06500 PF00004 ATPase family associated with various cellular activities (AAA) LDO52_06510 PF00291 Pyridoxal-phosphate dependent enzyme LDO52_06515 PF01743 Poly A polymerase head domain LDO52_06515 PF00571 CBS domain LDO52_06545 PF00675 Insulinase (Peptidase family M16) LDO52_06545 PF05193 Peptidase M16 inactive domain LDO52_06550 PF00448 SRP54-type protein, GTPase domain LDO52_06550 PF02881 SRP54-type protein, helical bundle domain LDO52_06565 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LDO52_06595 PF13737 Transposase DDE domain LDO52_06610 PF00583 Acetyltransferase (GNAT) family LDO52_06615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_06615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_06615 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_06620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_06620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_06620 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_06625 PF03109 ABC1 family LDO52_06640 PF05175 Methyltransferase small domain LDO52_06645 PF01264 Chorismate synthase LDO52_06660 PF01266 FAD dependent oxidoreductase LDO52_06670 PF02542 YgbB family LDO52_06680 PF00793 DAHP synthetase I family LDO52_06685 PF01925 Sulfite exporter TauE/SafE LDO52_06690 PF02684 Lipid-A-disaccharide synthetase LDO52_06695 PF12833 Helix-turn-helix domain LDO52_06695 PF12852 Cupin LDO52_06700 PF00487 Fatty acid desaturase LDO52_06705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_06705 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_06705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_06705 PF12806 Acetyl-CoA dehydrogenase C-terminal like LDO52_06710 PF12833 Helix-turn-helix domain LDO52_06710 PF02805 Metal binding domain of Ada LDO52_06715 PF07690 Major Facilitator Superfamily LDO52_06725 PF01654 Cytochrome bd terminal oxidase subunit I LDO52_06730 PF02322 Cytochrome bd terminal oxidase subunit II LDO52_06740 PF00565 Staphylococcal nuclease homologue LDO52_06745 PF03466 LysR substrate binding domain LDO52_06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_06750 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_06750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_06750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_06765 PF00106 short chain dehydrogenase LDO52_06800 PF13091 PLD-like domain LDO52_06805 PF08240 Alcohol dehydrogenase GroES-like domain LDO52_06805 PF00107 Zinc-binding dehydrogenase LDO52_06815 PF00793 DAHP synthetase I family LDO52_06820 PF00437 Type II/IV secretion system protein LDO52_06825 PF07690 Major Facilitator Superfamily LDO52_06830 PF01597 Glycine cleavage H-protein LDO52_06835 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LDO52_06835 PF12833 Helix-turn-helix domain LDO52_06845 PF00005 ABC transporter LDO52_06845 PF00664 ABC transporter transmembrane region LDO52_06855 PF00924 Mechanosensitive ion channel LDO52_06860 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LDO52_06870 PF00375 Sodium:dicarboxylate symporter family LDO52_06875 PF01740 STAS domain LDO52_06875 PF00916 Sulfate permease family LDO52_06885 PF00291 Pyridoxal-phosphate dependent enzyme LDO52_06890 PF00403 Heavy-metal-associated domain LDO52_06895 PF00376 MerR family regulatory protein LDO52_06895 PF09278 MerR, DNA binding LDO52_06905 PF00440 Bacterial regulatory proteins, tetR family LDO52_06905 PF08360 QacR-like protein, C-terminal region LDO52_06910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_06910 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_06910 PF12806 Acetyl-CoA dehydrogenase C-terminal like LDO52_06910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_06915 PF02803 Thiolase, C-terminal domain LDO52_06915 PF00108 Thiolase, N-terminal domain LDO52_06920 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LDO52_06920 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LDO52_06925 PF10005 zinc-ribbon domain LDO52_06925 PF15887 Putative zinc-binding metallo-peptidase LDO52_06940 PF12146 Serine aminopeptidase, S33 LDO52_06945 PF00108 Thiolase, N-terminal domain LDO52_06945 PF02803 Thiolase, C-terminal domain LDO52_06950 PF01144 Coenzyme A transferase LDO52_06955 PF01144 Coenzyme A transferase LDO52_06960 PF03594 Benzoate membrane transport protein LDO52_06965 PF00106 short chain dehydrogenase LDO52_06970 PF00970 Oxidoreductase FAD-binding domain LDO52_06970 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO52_06970 PF00175 Oxidoreductase NAD-binding domain LDO52_06975 PF00866 Ring hydroxylating beta subunit LDO52_06980 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LDO52_06980 PF00355 Rieske [2Fe-2S] domain LDO52_06985 PF00775 Dioxygenase LDO52_06985 PF04444 Catechol dioxygenase N terminus LDO52_06990 PF02426 Muconolactone delta-isomerase LDO52_06995 PF13378 Enolase C-terminal domain-like LDO52_06995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LDO52_07000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_07000 PF03466 LysR substrate binding domain LDO52_07005 PF07690 Major Facilitator Superfamily LDO52_07015 PF00155 Aminotransferase class I and II LDO52_07015 PF00392 Bacterial regulatory proteins, gntR family LDO52_07020 PF00501 AMP-binding enzyme LDO52_07020 PF13193 AMP-binding enzyme C-terminal domain LDO52_07030 PF00175 Oxidoreductase NAD-binding domain LDO52_07030 PF00042 Globin LDO52_07030 PF00970 Oxidoreductase FAD-binding domain LDO52_07035 PF00487 Fatty acid desaturase LDO52_07045 PF13419 Haloacid dehalogenase-like hydrolase LDO52_07050 PF03466 LysR substrate binding domain LDO52_07050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_07055 PF00005 ABC transporter LDO52_07065 PF18267 Rubredoxin NAD+ reductase C-terminal domain LDO52_07065 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_07065 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDO52_07065 PF04324 BFD-like [2Fe-2S] binding domain LDO52_07065 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDO52_07070 PF04324 BFD-like [2Fe-2S] binding domain LDO52_07070 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_07070 PF18267 Rubredoxin NAD+ reductase C-terminal domain LDO52_07070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LDO52_07070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LDO52_07075 PF01226 Formate/nitrite transporter LDO52_07080 PF00069 Protein kinase domain LDO52_07085 PF00593 TonB dependent receptor LDO52_07085 PF07715 TonB-dependent Receptor Plug Domain LDO52_07095 PF02028 BCCT, betaine/carnitine/choline family transporter LDO52_07100 PF00440 Bacterial regulatory proteins, tetR family LDO52_07100 PF13977 BetI-type transcriptional repressor, C-terminal LDO52_07105 PF00171 Aldehyde dehydrogenase family LDO52_07110 PF05199 GMC oxidoreductase LDO52_07110 PF00732 GMC oxidoreductase LDO52_07120 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LDO52_07120 PF18381 YcaO cyclodehydratase C-terminal domain LDO52_07130 PF09339 IclR helix-turn-helix domain LDO52_07135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_07135 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_07135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_07140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_07140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_07140 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_07145 PF07690 Major Facilitator Superfamily LDO52_07150 PF01144 Coenzyme A transferase LDO52_07155 PF01144 Coenzyme A transferase LDO52_07165 PF00990 Diguanylate cyclase, GGDEF domain LDO52_07165 PF00563 EAL domain LDO52_07165 PF03707 Bacterial signalling protein N terminal repeat LDO52_07170 PF07690 Major Facilitator Superfamily LDO52_07180 PF07690 Major Facilitator Superfamily LDO52_07185 PF00378 Enoyl-CoA hydratase/isomerase LDO52_07190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDO52_07190 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain LDO52_07190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDO52_07195 PF00108 Thiolase, N-terminal domain LDO52_07195 PF02803 Thiolase, C-terminal domain LDO52_07205 PF00596 Class II Aldolase and Adducin N-terminal domain LDO52_07210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDO52_07215 PF00378 Enoyl-CoA hydratase/isomerase LDO52_07220 PF03060 Nitronate monooxygenase LDO52_07225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_07225 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_07225 PF12806 Acetyl-CoA dehydrogenase C-terminal like LDO52_07225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_07230 PF08241 Methyltransferase domain LDO52_07230 PF12697 Alpha/beta hydrolase family LDO52_07235 PF00743 Flavin-binding monooxygenase-like LDO52_07240 PF13193 AMP-binding enzyme C-terminal domain LDO52_07240 PF00501 AMP-binding enzyme LDO52_07245 PF02515 CoA-transferase family III LDO52_07250 PF07690 Major Facilitator Superfamily LDO52_07265 PF00378 Enoyl-CoA hydratase/isomerase LDO52_07270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_07270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_07270 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_07275 PF13193 AMP-binding enzyme C-terminal domain LDO52_07275 PF00501 AMP-binding enzyme LDO52_07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_07285 PF03466 LysR substrate binding domain LDO52_07290 PF00171 Aldehyde dehydrogenase family LDO52_07295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDO52_07295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LDO52_07300 PF00501 AMP-binding enzyme LDO52_07300 PF13193 AMP-binding enzyme C-terminal domain LDO52_07305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_07305 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_07305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_07310 PF00378 Enoyl-CoA hydratase/isomerase LDO52_07340 PF01389 OmpA-like transmembrane domain LDO52_07340 PF00691 OmpA family LDO52_07350 PF12697 Alpha/beta hydrolase family LDO52_07430 PF10145 Phage-related minor tail protein LDO52_07430 PF01551 Peptidase family M23 LDO52_07430 PF01464 Transglycosylase SLT domain LDO52_07460 PF02463 RecF/RecN/SMC N terminal domain LDO52_07480 PF10549 ORF11CD3 domain LDO52_07480 PF09669 Phage regulatory protein Rha (Phage_pRha) LDO52_07620 PF01381 Helix-turn-helix LDO52_07620 PF00717 Peptidase S24-like LDO52_07655 PF02601 Exonuclease VII, large subunit LDO52_07655 PF13742 OB-fold nucleic acid binding domain LDO52_07710 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain LDO52_07710 PF00589 Phage integrase family LDO52_07715 PF00206 Lyase LDO52_07715 PF10415 Fumarase C C-terminus LDO52_07720 PF16363 GDP-mannose 4,6 dehydratase LDO52_07725 PF02635 DsrE/DsrF-like family LDO52_07755 PF04073 Aminoacyl-tRNA editing domain LDO52_07760 PF01220 Dehydroquinase class II LDO52_07765 PF00364 Biotin-requiring enzyme LDO52_07770 PF02785 Biotin carboxylase C-terminal domain LDO52_07770 PF00289 Biotin carboxylase, N-terminal domain LDO52_07770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDO52_07780 PF17151 Periplasmic sensor domain LDO52_07780 PF00990 Diguanylate cyclase, GGDEF domain LDO52_07785 PF01425 Amidase LDO52_07790 PF12832 MFS_1 like family LDO52_07820 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system LDO52_07860 PF00285 Citrate synthase, C-terminal domain LDO52_07870 PF00440 Bacterial regulatory proteins, tetR family LDO52_07875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDO52_07875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDO52_07885 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LDO52_07890 PF00004 ATPase family associated with various cellular activities (AAA) LDO52_07890 PF07724 AAA domain (Cdc48 subfamily) LDO52_07890 PF17871 AAA lid domain LDO52_07890 PF02861 Clp amino terminal domain, pathogenicity island component LDO52_07890 PF10431 C-terminal, D2-small domain, of ClpB protein LDO52_07895 PF02617 ATP-dependent Clp protease adaptor protein ClpS LDO52_07905 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDO52_07905 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDO52_07915 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LDO52_07920 PF00291 Pyridoxal-phosphate dependent enzyme LDO52_07920 PF00585 C-terminal regulatory domain of Threonine dehydratase LDO52_07925 PF02080 TrkA-C domain LDO52_07925 PF02254 TrkA-N domain LDO52_07930 PF02386 Cation transport protein LDO52_07935 PF02253 Phospholipase A1 LDO52_07940 PF00675 Insulinase (Peptidase family M16) LDO52_07940 PF05193 Peptidase M16 inactive domain LDO52_07940 PF08367 Peptidase M16C associated LDO52_07950 PF00294 pfkB family carbohydrate kinase LDO52_07960 PF07290 Protein of unknown function (DUF1449) LDO52_07980 PF05698 Bacterial trigger factor protein (TF) C-terminus LDO52_07985 PF00216 Bacterial DNA-binding protein LDO52_08000 PF02082 Transcriptional regulator LDO52_08005 PF00266 Aminotransferase class-V LDO52_08010 PF01592 NifU-like N terminal domain LDO52_08015 PF01521 Iron-sulphur cluster biosynthesis LDO52_08020 PF00226 DnaJ domain LDO52_08020 PF07743 HSCB C-terminal oligomerisation domain LDO52_08025 PF00012 Hsp70 protein LDO52_08030 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO52_08035 PF00211 Adenylate and Guanylate cyclase catalytic domain LDO52_08045 PF00271 Helicase conserved C-terminal domain LDO52_08045 PF03461 TRCF domain LDO52_08045 PF17757 UvrB interaction domain LDO52_08045 PF02559 CarD-like/TRCF domain LDO52_08045 PF00270 DEAD/DEAH box helicase LDO52_08055 PF10415 Fumarase C C-terminus LDO52_08055 PF00206 Lyase LDO52_08060 PF00474 Sodium:solute symporter family LDO52_08065 PF01037 Lrp/AsnC ligand binding domain LDO52_08070 PF01619 Proline dehydrogenase LDO52_08070 PF00171 Aldehyde dehydrogenase family LDO52_08070 PF14850 DNA-binding domain of Proline dehydrogenase LDO52_08070 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LDO52_08075 PF05958 tRNA (Uracil-5-)-methyltransferase LDO52_08090 PF01062 Bestrophin, RFP-TM, chloride channel LDO52_08095 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDO52_08095 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LDO52_08100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDO52_08105 PF00149 Calcineurin-like phosphoesterase LDO52_08115 PF00881 Nitroreductase family LDO52_08130 PF01116 Fructose-bisphosphate aldolase class-II LDO52_08140 PF00162 Phosphoglycerate kinase LDO52_08150 PF02545 Maf-like protein LDO52_08155 PF08007 Cupin superfamily protein LDO52_08160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_08160 PF07730 Histidine kinase LDO52_08165 PF00196 Bacterial regulatory proteins, luxR family LDO52_08165 PF00072 Response regulator receiver domain LDO52_08175 PF03737 Aldolase/RraA LDO52_08180 PF13460 NAD(P)H-binding LDO52_08185 PF01649 Ribosomal protein S20 LDO52_08200 PF00459 Inositol monophosphatase family LDO52_08205 PF13419 Haloacid dehalogenase-like hydrolase LDO52_08210 PF01479 S4 domain LDO52_08215 PF00154 recA bacterial DNA recombination protein LDO52_08220 PF02631 RecX family LDO52_08235 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LDO52_08235 PF00132 Bacterial transferase hexapeptide (six repeats) LDO52_08240 PF07977 FabA-like domain LDO52_08245 PF00132 Bacterial transferase hexapeptide (six repeats) LDO52_08245 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LDO52_08255 PF01103 Surface antigen LDO52_08255 PF07244 Surface antigen variable number repeat LDO52_08260 PF02163 Peptidase family M50 LDO52_08260 PF13180 PDZ domain LDO52_08260 PF17820 PDZ domain LDO52_08265 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LDO52_08265 PF13288 DXP reductoisomerase C-terminal domain LDO52_08265 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LDO52_08275 PF01255 Putative undecaprenyl diphosphate synthase LDO52_08280 PF01765 Ribosome recycling factor LDO52_08285 PF00696 Amino acid kinase family LDO52_08290 PF04055 Radical SAM superfamily LDO52_08290 PF18693 TRAM domain LDO52_08290 PF00919 Uncharacterized protein family UPF0004 LDO52_08295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_08295 PF00989 PAS fold LDO52_08295 PF00512 His Kinase A (phospho-acceptor) domain LDO52_08300 PF00072 Response regulator receiver domain LDO52_08300 PF00158 Sigma-54 interaction domain LDO52_08300 PF02954 Bacterial regulatory protein, Fis family LDO52_08310 PF07690 Major Facilitator Superfamily LDO52_08315 PF13737 Transposase DDE domain LDO52_08320 PF07690 Major Facilitator Superfamily LDO52_08325 PF01134 Glucose inhibited division protein A LDO52_08325 PF13932 GidA associated domain LDO52_08355 PF02954 Bacterial regulatory protein, Fis family LDO52_08360 PF02142 MGS-like domain LDO52_08360 PF01808 AICARFT/IMPCHase bienzyme LDO52_08365 PF02844 Phosphoribosylglycinamide synthetase, N domain LDO52_08365 PF02843 Phosphoribosylglycinamide synthetase, C domain LDO52_08365 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LDO52_08370 PF03180 NLPA lipoprotein LDO52_08375 PF09383 NIL domain LDO52_08375 PF00005 ABC transporter LDO52_08380 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_08385 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDO52_08385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDO52_08385 PF14579 Helix-hairpin-helix motif LDO52_08385 PF02811 PHP domain LDO52_08385 PF01336 OB-fold nucleic acid binding domain LDO52_08390 PF00588 SpoU rRNA Methylase family LDO52_08395 PF00132 Bacterial transferase hexapeptide (six repeats) LDO52_08410 PF00488 MutS domain V LDO52_08410 PF01624 MutS domain I LDO52_08410 PF05188 MutS domain II LDO52_08410 PF05192 MutS domain III LDO52_08410 PF05190 MutS family domain IV LDO52_08415 PF11953 Domain of unknown function (DUF3470) LDO52_08415 PF00037 4Fe-4S binding domain LDO52_08425 PF01596 O-methyltransferase LDO52_08440 PF01205 Uncharacterized protein family UPF0029 LDO52_08445 PF13533 Biotin-lipoyl like LDO52_08450 PF00664 ABC transporter transmembrane region LDO52_08450 PF00005 ABC transporter LDO52_08450 PF03412 Peptidase C39 family LDO52_08460 PF00005 ABC transporter LDO52_08460 PF12399 Branched-chain amino acid ATP-binding cassette transporter LDO52_08465 PF03968 OstA-like protein LDO52_08480 PF01380 SIS domain LDO52_08480 PF00571 CBS domain LDO52_08485 PF01406 tRNA synthetases class I (C) catalytic domain LDO52_08485 PF09190 DALR domain LDO52_08505 PF01545 Cation efflux family LDO52_08510 PF02798 Glutathione S-transferase, N-terminal domain LDO52_08510 PF14834 Glutathione S-transferase, C-terminal domain LDO52_08515 PF00117 Glutamine amidotransferase class-I LDO52_08515 PF02540 NAD synthase LDO52_08515 PF00958 GMP synthase C terminal domain LDO52_08520 PF01810 LysE type translocator LDO52_08525 PF04264 YceI-like domain LDO52_08540 PF00456 Transketolase, thiamine diphosphate binding domain LDO52_08540 PF02779 Transketolase, pyrimidine binding domain LDO52_08540 PF02780 Transketolase, C-terminal domain LDO52_08550 PF02773 S-adenosylmethionine synthetase, C-terminal domain LDO52_08550 PF02772 S-adenosylmethionine synthetase, central domain LDO52_08550 PF00438 S-adenosylmethionine synthetase, N-terminal domain LDO52_08560 PF04143 Sulphur transport LDO52_08580 PF03060 Nitronate monooxygenase LDO52_08590 PF01207 Dihydrouridine synthase (Dus) LDO52_08595 PF07759 Protein of unknown function (DUF1615) LDO52_08605 PF00487 Fatty acid desaturase LDO52_08610 PF00111 2Fe-2S iron-sulfur cluster binding domain LDO52_08610 PF00970 Oxidoreductase FAD-binding domain LDO52_08610 PF00175 Oxidoreductase NAD-binding domain LDO52_08615 PF00440 Bacterial regulatory proteins, tetR family LDO52_08625 PF01348 Type II intron maturase LDO52_08625 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LDO52_08655 PF00271 Helicase conserved C-terminal domain LDO52_08655 PF00176 SNF2 family N-terminal domain LDO52_08655 PF18339 RapA N-terminal Tudor like domain 1 LDO52_08655 PF18337 RapA N-terminal Tudor like domain LDO52_08655 PF12137 RNA polymerase recycling family C-terminal LDO52_08660 PF00849 RNA pseudouridylate synthase LDO52_08675 PF03928 Haem-degrading LDO52_08680 PF00202 Aminotransferase class-III LDO52_08685 PF02581 Thiamine monophosphate synthase LDO52_08700 PF01928 CYTH domain LDO52_08720 PF00675 Insulinase (Peptidase family M16) LDO52_08720 PF05193 Peptidase M16 inactive domain LDO52_08725 PF02567 Phenazine biosynthesis-like protein LDO52_08730 PF16123 Hydroxyacylglutathione hydrolase C-terminus LDO52_08730 PF00753 Metallo-beta-lactamase superfamily LDO52_08780 PF00069 Protein kinase domain LDO52_08795 PF00814 Glycoprotease family LDO52_08800 PF01165 Ribosomal protein S21 LDO52_08805 PF09424 Yqey-like protein LDO52_08815 PF01435 Peptidase family M48 LDO52_08820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDO52_08820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDO52_08835 PF00156 Phosphoribosyl transferase domain LDO52_08845 PF01180 Dihydroorotate dehydrogenase LDO52_08865 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LDO52_08865 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LDO52_08870 PF00881 Nitroreductase family LDO52_08880 PF00270 DEAD/DEAH box helicase LDO52_08880 PF00271 Helicase conserved C-terminal domain LDO52_08885 PF00313 'Cold-shock' DNA-binding domain LDO52_08895 PF00140 Sigma-70 factor, region 1.2 LDO52_08895 PF04542 Sigma-70 region 2 LDO52_08895 PF04545 Sigma-70, region 4 LDO52_08900 PF04241 Protein of unknown function (DUF423) LDO52_08910 PF05690 Thiazole biosynthesis protein ThiG LDO52_08915 PF00043 Glutathione S-transferase, C-terminal domain LDO52_08915 PF02798 Glutathione S-transferase, N-terminal domain LDO52_08920 PF01740 STAS domain LDO52_08920 PF00916 Sulfate permease family LDO52_08925 PF02390 Putative methyltransferase LDO52_08945 PF13193 AMP-binding enzyme C-terminal domain LDO52_08945 PF00501 AMP-binding enzyme LDO52_08950 PF17925 Tetracyclin repressor-like, C-terminal domain LDO52_08950 PF00440 Bacterial regulatory proteins, tetR family LDO52_08955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_08955 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_08955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_08960 PF01039 Carboxyl transferase domain LDO52_08965 PF00378 Enoyl-CoA hydratase/isomerase LDO52_08970 PF00364 Biotin-requiring enzyme LDO52_08970 PF18140 Propionyl-coenzyme A carboxylase BT domain LDO52_08970 PF02785 Biotin carboxylase C-terminal domain LDO52_08970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDO52_08970 PF00289 Biotin carboxylase, N-terminal domain LDO52_08975 PF00682 HMGL-like LDO52_08980 PF01144 Coenzyme A transferase LDO52_08985 PF01144 Coenzyme A transferase LDO52_08990 PF02667 Short chain fatty acid transporter LDO52_09000 PF01979 Amidohydrolase family LDO52_09005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDO52_09005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDO52_09015 PF02926 THUMP domain LDO52_09015 PF10672 S-adenosylmethionine-dependent methyltransferase LDO52_09015 PF01170 Putative RNA methylase family UPF0020 LDO52_09025 PF00004 ATPase family associated with various cellular activities (AAA) LDO52_09025 PF07724 AAA domain (Cdc48 subfamily) LDO52_09025 PF17871 AAA lid domain LDO52_09025 PF02861 Clp amino terminal domain, pathogenicity island component LDO52_09025 PF10431 C-terminal, D2-small domain, of ClpB protein LDO52_09035 PF00248 Aldo/keto reductase family LDO52_09040 PF00027 Cyclic nucleotide-binding domain LDO52_09040 PF13545 Crp-like helix-turn-helix domain LDO52_09045 PF02566 OsmC-like protein LDO52_09050 PF00149 Calcineurin-like phosphoesterase LDO52_09055 PF00149 Calcineurin-like phosphoesterase LDO52_09080 PF13007 Transposase C of IS166 homeodomain LDO52_09080 PF03050 Transposase IS66 family LDO52_09080 PF13005 zinc-finger binding domain of transposase IS66 LDO52_09080 PF13817 IS66 C-terminal element LDO52_09105 PF04984 Phage tail sheath protein subtilisin-like domain LDO52_09105 PF17482 Phage tail sheath C-terminal domain LDO52_09115 PF13737 Transposase DDE domain LDO52_09120 PF01757 Acyltransferase family LDO52_09125 PF13737 Transposase DDE domain LDO52_09165 PF01757 Acyltransferase family LDO52_09200 PF00589 Phage integrase family LDO52_09210 PF13559 Domain of unknown function (DUF4129) LDO52_09210 PF01841 Transglutaminase-like superfamily LDO52_09210 PF11992 Domain of unknown function (DUF3488) LDO52_09220 PF17863 AAA lid domain LDO52_09220 PF07726 ATPase family associated with various cellular activities (AAA) LDO52_09225 PF04328 Selenoprotein, putative LDO52_09230 PF02554 Carbon starvation protein CstA LDO52_09230 PF13722 5TM C-terminal transporter carbon starvation CstA LDO52_09235 PF01132 Elongation factor P (EF-P) OB domain LDO52_09235 PF08207 Elongation factor P (EF-P) KOW-like domain LDO52_09235 PF09285 Elongation factor P, C-terminal LDO52_09240 PF04055 Radical SAM superfamily LDO52_09255 PF01197 Ribosomal protein L31 LDO52_09260 PF13593 SBF-like CPA transporter family (DUF4137) LDO52_09265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDO52_09270 PF07690 Major Facilitator Superfamily LDO52_09275 PF13654 AAA domain LDO52_09275 PF05362 Lon protease (S16) C-terminal proteolytic domain LDO52_09280 PF00462 Glutaredoxin LDO52_09285 PF00202 Aminotransferase class-III LDO52_09290 PF03466 LysR substrate binding domain LDO52_09290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_09295 PF01476 LysM domain LDO52_09295 PF01551 Peptidase family M23 LDO52_09300 PF01975 Survival protein SurE LDO52_09315 PF07943 Penicillin-binding protein 5, C-terminal domain LDO52_09315 PF00768 D-alanyl-D-alanine carboxypeptidase LDO52_09320 PF00132 Bacterial transferase hexapeptide (six repeats) LDO52_09340 PF00293 NUDIX domain LDO52_09350 PF04356 Protein of unknown function (DUF489) LDO52_09355 PF08328 Adenylosuccinate lyase C-terminal LDO52_09355 PF00206 Lyase LDO52_09375 PF01343 Peptidase family S49 LDO52_09375 PF08496 Peptidase family S49 N-terminal LDO52_09385 PF00005 ABC transporter LDO52_09390 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_09395 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_09400 PF12849 PBP superfamily domain LDO52_09405 PF00282 Pyridoxal-dependent decarboxylase conserved domain LDO52_09410 PF00202 Aminotransferase class-III LDO52_09420 PF01569 PAP2 superfamily LDO52_09425 PF01472 PUA domain LDO52_09425 PF00696 Amino acid kinase family LDO52_09430 PF01018 GTP1/OBG LDO52_09430 PF01926 50S ribosome-binding GTPase LDO52_09435 PF07690 Major Facilitator Superfamily LDO52_09445 PF01638 HxlR-like helix-turn-helix LDO52_09450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDO52_09450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDO52_09455 PF00892 EamA-like transporter family LDO52_09465 PF17757 UvrB interaction domain LDO52_09465 PF00271 Helicase conserved C-terminal domain LDO52_09465 PF04851 Type III restriction enzyme, res subunit LDO52_09465 PF02151 UvrB/uvrC motif LDO52_09465 PF12344 Ultra-violet resistance protein B LDO52_09500 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_09500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDO52_09505 PF04055 Radical SAM superfamily LDO52_09510 PF09317 Domain of unknown function (DUF1974) LDO52_09510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_09510 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_09510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_09525 PF13180 PDZ domain LDO52_09525 PF17820 PDZ domain LDO52_09530 PF01784 NIF3 (NGG1p interacting factor 3) LDO52_09535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LDO52_09535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LDO52_09575 PF01040 UbiA prenyltransferase family LDO52_09580 PF04345 Chorismate lyase LDO52_09590 PF00120 Glutamine synthetase, catalytic domain LDO52_09590 PF03951 Glutamine synthetase, beta-Grasp domain LDO52_09595 PF00117 Glutamine amidotransferase class-I LDO52_09600 PF00591 Glycosyl transferase family, a/b domain LDO52_09600 PF02885 Glycosyl transferase family, helical bundle domain LDO52_09605 PF00218 Indole-3-glycerol phosphate synthase LDO52_09615 PF01227 GTP cyclohydrolase I LDO52_09630 PF00990 Diguanylate cyclase, GGDEF domain LDO52_09645 PF05675 Protein of unknown function (DUF817) LDO52_09650 PF01208 Uroporphyrinogen decarboxylase (URO-D) LDO52_09660 PF17954 Quercetinase C-terminal cupin domain LDO52_09660 PF02678 Pirin LDO52_09665 PF05175 Methyltransferase small domain LDO52_09675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO52_09675 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_09685 PF00764 Arginosuccinate synthase LDO52_09690 PF00563 EAL domain LDO52_09690 PF01590 GAF domain LDO52_09690 PF00990 Diguanylate cyclase, GGDEF domain LDO52_09690 PF00360 Phytochrome region LDO52_09695 PF01979 Amidohydrolase family LDO52_09700 PF00929 Exonuclease LDO52_09710 PF07715 TonB-dependent Receptor Plug Domain LDO52_09720 PF13359 DDE superfamily endonuclease LDO52_09720 PF13613 Helix-turn-helix of DDE superfamily endonuclease LDO52_09735 PF00324 Amino acid permease LDO52_09765 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_09765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO52_09770 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_09770 PF12911 N-terminal TM domain of oligopeptide transport permease C LDO52_09775 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_09780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDO52_09785 PF01476 LysM domain LDO52_09785 PF01464 Transglycosylase SLT domain LDO52_09790 PF00929 Exonuclease LDO52_09800 PF00293 NUDIX domain LDO52_09800 PF09297 NADH pyrophosphatase zinc ribbon domain LDO52_09805 PF07859 alpha/beta hydrolase fold LDO52_09810 PF04972 BON domain LDO52_09815 PF02021 Uncharacterised protein family UPF0102 LDO52_09820 PF04348 LppC putative lipoprotein LDO52_09825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDO52_09835 PF01494 FAD binding domain LDO52_09840 PF01494 FAD binding domain LDO52_09845 PF00892 EamA-like transporter family LDO52_09850 PF04070 Domain of unknown function (DUF378) LDO52_09855 PF00557 Metallopeptidase family M24 LDO52_09855 PF05195 Aminopeptidase P, N-terminal domain LDO52_09885 PF07995 Glucose / Sorbosone dehydrogenase LDO52_09895 PF01812 5-formyltetrahydrofolate cyclo-ligase family LDO52_09900 PF00004 ATPase family associated with various cellular activities (AAA) LDO52_09900 PF05362 Lon protease (S16) C-terminal proteolytic domain LDO52_09900 PF02190 ATP-dependent protease La (LON) substrate-binding domain LDO52_09905 PF04389 Peptidase family M28 LDO52_09910 PF02590 Predicted SPOUT methyltransferase LDO52_09915 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LDO52_09925 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LDO52_09925 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LDO52_09930 PF04060 Putative Fe-S cluster LDO52_09935 PF00730 HhH-GPD superfamily base excision DNA repair protein LDO52_09935 PF10576 Iron-sulfur binding domain of endonuclease III LDO52_09935 PF00633 Helix-hairpin-helix motif LDO52_09945 PF05191 Adenylate kinase, active site lid LDO52_09960 PF03717 Penicillin-binding Protein dimerisation domain LDO52_09960 PF00905 Penicillin binding protein transpeptidase domain LDO52_10025 PF00118 TCP-1/cpn60 chaperonin family LDO52_10030 PF00166 Chaperonin 10 Kd subunit LDO52_10040 PF00781 Diacylglycerol kinase catalytic domain LDO52_10045 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LDO52_10045 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LDO52_10060 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LDO52_10060 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LDO52_10085 PF00698 Acyl transferase domain LDO52_10085 PF08240 Alcohol dehydrogenase GroES-like domain LDO52_10085 PF08659 KR domain LDO52_10085 PF00550 Phosphopantetheine attachment site LDO52_10085 PF14765 Polyketide synthase dehydratase LDO52_10090 PF00085 Thioredoxin LDO52_10100 PF00009 Elongation factor Tu GTP binding domain LDO52_10105 PF01507 Phosphoadenosine phosphosulfate reductase family LDO52_10120 PF01145 SPFH domain / Band 7 family LDO52_10120 PF15975 Flotillin LDO52_10125 PF01609 Transposase DDE domain LDO52_10125 PF13006 Insertion element 4 transposase N-terminal LDO52_10130 PF02629 CoA binding domain LDO52_10130 PF00549 CoA-ligase LDO52_10135 PF08442 ATP-grasp domain LDO52_10135 PF00549 CoA-ligase LDO52_10140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDO52_10140 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_10145 PF00364 Biotin-requiring enzyme LDO52_10145 PF02817 e3 binding domain LDO52_10145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDO52_10150 PF16078 2-oxoglutarate dehydrogenase N-terminus LDO52_10150 PF00676 Dehydrogenase E1 component LDO52_10150 PF16870 2-oxoglutarate dehydrogenase C-terminal LDO52_10150 PF02779 Transketolase, pyrimidine binding domain LDO52_10155 PF13085 2Fe-2S iron-sulfur cluster binding domain LDO52_10160 PF02910 Fumarate reductase flavoprotein C-term LDO52_10160 PF00890 FAD binding domain LDO52_10165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LDO52_10170 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LDO52_10175 PF00285 Citrate synthase, C-terminal domain LDO52_10180 PF04717 Type VI secretion system, phage-baseplate injector LDO52_10180 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LDO52_10180 PF13296 Putative type VI secretion system Rhs element Vgr LDO52_10185 PF00795 Carbon-nitrogen hydrolase LDO52_10185 PF02540 NAD synthase LDO52_10200 PF00582 Universal stress protein family LDO52_10210 PF00999 Sodium/hydrogen exchanger family LDO52_10220 PF04228 Putative neutral zinc metallopeptidase LDO52_10225 PF05661 Protein of unknown function (DUF808) LDO52_10230 PF00579 tRNA synthetases class I (W and Y) LDO52_10235 PF01336 OB-fold nucleic acid binding domain LDO52_10235 PF00152 tRNA synthetases class II (D, K and N) LDO52_10245 PF00156 Phosphoribosyl transferase domain LDO52_10250 PF00301 Rubredoxin LDO52_10255 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_10255 PF18113 Rubredoxin binding C-terminal domain LDO52_10260 PF00561 alpha/beta hydrolase fold LDO52_10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_10265 PF03466 LysR substrate binding domain LDO52_10275 PF13089 Polyphosphate kinase N-terminal domain LDO52_10275 PF02503 Polyphosphate kinase middle domain LDO52_10275 PF17941 Polyphosphate kinase C-terminal domain 1 LDO52_10275 PF13090 Polyphosphate kinase C-terminal domain 2 LDO52_10280 PF00912 Transglycosylase LDO52_10285 PF01694 Rhomboid family LDO52_10295 PF00005 ABC transporter LDO52_10300 PF13472 GDSL-like Lipase/Acylhydrolase family LDO52_10305 PF00484 Carbonic anhydrase LDO52_10310 PF00561 alpha/beta hydrolase fold LDO52_10320 PF07715 TonB-dependent Receptor Plug Domain LDO52_10320 PF00593 TonB dependent receptor LDO52_10325 PF01521 Iron-sulphur cluster biosynthesis LDO52_10325 PF01106 NifU-like domain LDO52_10340 PF01384 Phosphate transporter family LDO52_10345 PF02574 Homocysteine S-methyltransferase LDO52_10345 PF00809 Pterin binding enzyme LDO52_10345 PF02607 B12 binding domain LDO52_10345 PF02310 B12 binding domain LDO52_10345 PF02965 Vitamin B12 dependent methionine synthase, activation domain LDO52_10350 PF00580 UvrD/REP helicase N-terminal domain LDO52_10350 PF13361 UvrD-like helicase C-terminal domain LDO52_10355 PF02733 Dak1 domain LDO52_10360 PF04960 Glutaminase LDO52_10375 PF08264 Anticodon-binding domain of tRNA LDO52_10375 PF00133 tRNA synthetases class I (I, L, M and V) LDO52_10375 PF10458 Valyl tRNA synthetase tRNA binding arm LDO52_10405 PF04480 Protein of unknown function (DUF559) LDO52_10420 PF00194 Eukaryotic-type carbonic anhydrase LDO52_10425 PF04239 Protein of unknown function (DUF421) LDO52_10430 PF13419 Haloacid dehalogenase-like hydrolase LDO52_10450 PF01734 Patatin-like phospholipase LDO52_10460 PF01145 SPFH domain / Band 7 family LDO52_10465 PF00474 Sodium:solute symporter family LDO52_10470 PF00348 Polyprenyl synthetase LDO52_10475 PF04303 PrpF protein LDO52_10480 PF00324 Amino acid permease LDO52_10505 PF01507 Phosphoadenosine phosphosulfate reductase family LDO52_10510 PF06974 Protein of unknown function (DUF1298) LDO52_10510 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LDO52_10520 PF00575 S1 RNA binding domain LDO52_10520 PF10150 Ribonuclease E/G family LDO52_10525 PF02545 Maf-like protein LDO52_10530 PF04093 rod shape-determining protein MreD LDO52_10535 PF04085 rod shape-determining protein MreC LDO52_10545 PF02686 Glu-tRNAGln amidotransferase C subunit LDO52_10550 PF01425 Amidase LDO52_10555 PF02934 GatB/GatE catalytic domain LDO52_10555 PF02637 GatB domain LDO52_10580 PF05992 SbmA/BacA-like family LDO52_10590 PF02358 Trehalose-phosphatase LDO52_10595 PF00982 Glycosyltransferase family 20 LDO52_10600 PF07690 Major Facilitator Superfamily LDO52_10610 PF05401 Nodulation protein S (NodS) LDO52_10645 PF00199 Catalase LDO52_10645 PF06628 Catalase-related immune-responsive LDO52_10645 PF18011 C-terminal domain found in long catalases LDO52_10650 PF00210 Ferritin-like domain LDO52_10655 PF00753 Metallo-beta-lactamase superfamily LDO52_10665 PF04143 Sulphur transport LDO52_10670 PF00005 ABC transporter LDO52_10675 PF02687 FtsX-like permease family LDO52_10675 PF12704 MacB-like periplasmic core domain LDO52_10680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO52_10690 PF13613 Helix-turn-helix of DDE superfamily endonuclease LDO52_10690 PF13359 DDE superfamily endonuclease LDO52_10740 PF01545 Cation efflux family LDO52_10745 PF00873 AcrB/AcrD/AcrF family LDO52_10765 PF13007 Transposase C of IS166 homeodomain LDO52_10765 PF13005 zinc-finger binding domain of transposase IS66 LDO52_10765 PF03050 Transposase IS66 family LDO52_10765 PF13817 IS66 C-terminal element LDO52_10780 PF03471 Transporter associated domain LDO52_10780 PF03741 Integral membrane protein TerC family LDO52_10790 PF00072 Response regulator receiver domain LDO52_10790 PF00486 Transcriptional regulatory protein, C terminal LDO52_10795 PF13493 Domain of unknown function (DUF4118) LDO52_10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_10795 PF00512 His Kinase A (phospho-acceptor) domain LDO52_10795 PF02702 Osmosensitive K+ channel His kinase sensor domain LDO52_10800 PF00005 ABC transporter LDO52_10815 PF02661 Fic/DOC family LDO52_10815 PF13784 Fic/DOC family N-terminal LDO52_10825 PF02661 Fic/DOC family LDO52_10825 PF13784 Fic/DOC family N-terminal LDO52_10835 PF00171 Aldehyde dehydrogenase family LDO52_10840 PF00465 Iron-containing alcohol dehydrogenase LDO52_10850 PF12008 Type I restriction and modification enzyme - subunit R C terminal LDO52_10850 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LDO52_10850 PF18766 SWI2/SNF2 ATPase LDO52_10865 PF12161 HsdM N-terminal domain LDO52_10865 PF02384 N-6 DNA Methylase LDO52_10875 PF08241 Methyltransferase domain LDO52_10920 PF13356 Arm DNA-binding domain LDO52_10920 PF00589 Phage integrase family LDO52_10930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDO52_10930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDO52_10935 PF03061 Thioesterase superfamily LDO52_10940 PF00490 Delta-aminolevulinic acid dehydratase LDO52_10945 PF01266 FAD dependent oxidoreductase LDO52_10950 PF01370 NAD dependent epimerase/dehydratase family LDO52_10950 PF08338 Domain of unknown function (DUF1731) LDO52_10960 PF12320 Type 5 capsule protein repressor C-terminal domain LDO52_10960 PF00149 Calcineurin-like phosphoesterase LDO52_10975 PF01168 Alanine racemase, N-terminal domain LDO52_10980 PF00437 Type II/IV secretion system protein LDO52_10985 PF00437 Type II/IV secretion system protein LDO52_10990 PF01475 Ferric uptake regulator family LDO52_10995 PF04355 SmpA / OmlA family LDO52_11000 PF03658 RnfH family Ubiquitin LDO52_11010 PF01814 Hemerythrin HHE cation binding domain LDO52_11015 PF13230 Glutamine amidotransferases class-II LDO52_11020 PF00696 Amino acid kinase family LDO52_11025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDO52_11025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDO52_11025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDO52_11025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDO52_11030 PF00692 dUTPase LDO52_11035 PF00580 UvrD/REP helicase N-terminal domain LDO52_11035 PF13361 UvrD-like helicase C-terminal domain LDO52_11040 PF13488 Glycine zipper LDO52_11040 PF00691 OmpA family LDO52_11045 PF01553 Acyltransferase LDO52_11055 PF03775 Septum formation inhibitor MinC, C-terminal domain LDO52_11060 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LDO52_11065 PF03776 Septum formation topological specificity factor MinE LDO52_11075 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LDO52_11075 PF17854 FtsK alpha domain LDO52_11075 PF09397 Ftsk gamma domain LDO52_11075 PF01580 FtsK/SpoIIIE family LDO52_11080 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_11085 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LDO52_11090 PF04377 Arginine-tRNA-protein transferase, C terminus LDO52_11090 PF04376 Arginine-tRNA-protein transferase, N terminus LDO52_11095 PF00583 Acetyltransferase (GNAT) family LDO52_11105 PF00009 Elongation factor Tu GTP binding domain LDO52_11105 PF03143 Elongation factor Tu C-terminal domain LDO52_11105 PF03144 Elongation factor Tu domain 2 LDO52_11110 PF03144 Elongation factor Tu domain 2 LDO52_11110 PF00009 Elongation factor Tu GTP binding domain LDO52_11110 PF03764 Elongation factor G, domain IV LDO52_11110 PF14492 Elongation Factor G, domain II LDO52_11110 PF00679 Elongation factor G C-terminus LDO52_11115 PF00177 Ribosomal protein S7p/S5e LDO52_11120 PF00164 Ribosomal protein S12/S23 LDO52_11130 PF02801 Beta-ketoacyl synthase, C-terminal domain LDO52_11130 PF00109 Beta-ketoacyl synthase, N-terminal domain LDO52_11135 PF03653 Uncharacterised protein family (UPF0093) LDO52_11145 PF00324 Amino acid permease LDO52_11150 PF01042 Endoribonuclease L-PSP LDO52_11155 PF00842 Alanine racemase, C-terminal domain LDO52_11155 PF01168 Alanine racemase, N-terminal domain LDO52_11160 PF01266 FAD dependent oxidoreductase LDO52_11165 PF01037 Lrp/AsnC ligand binding domain LDO52_11170 PF04972 BON domain LDO52_11170 PF01476 LysM domain LDO52_11175 PF00550 Phosphopantetheine attachment site LDO52_11185 PF00698 Acyl transferase domain LDO52_11190 PF01783 Ribosomal L32p protein family LDO52_11195 PF02620 Large ribosomal RNA subunit accumulation protein YceD LDO52_11200 PF04315 Elongation factor P hydroxylase LDO52_11205 PF01300 Telomere recombination LDO52_11215 PF02616 Segregation and condensation protein ScpA LDO52_11220 PF04079 Segregation and condensation complex subunit ScpB LDO52_11230 PF00005 ABC transporter LDO52_11230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDO52_11235 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_11240 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_11245 PF01432 Peptidase family M3 LDO52_11255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDO52_11280 PF01618 MotA/TolQ/ExbB proton channel family LDO52_11285 PF02472 Biopolymer transport protein ExbD/TolR LDO52_11290 PF02472 Biopolymer transport protein ExbD/TolR LDO52_11295 PF00210 Ferritin-like domain LDO52_11300 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LDO52_11305 PF00533 BRCA1 C Terminus (BRCT) domain LDO52_11305 PF01653 NAD-dependent DNA ligase adenylation domain LDO52_11305 PF03120 NAD-dependent DNA ligase OB-fold domain LDO52_11305 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LDO52_11305 PF12826 Helix-hairpin-helix motif LDO52_11315 PF06470 SMC proteins Flexible Hinge Domain LDO52_11315 PF02463 RecF/RecN/SMC N terminal domain LDO52_11325 PF01925 Sulfite exporter TauE/SafE LDO52_11330 PF02237 Biotin protein ligase C terminal domain LDO52_11330 PF03099 Biotin/lipoate A/B protein ligase family LDO52_11330 PF03309 Type III pantothenate kinase LDO52_11335 PF03309 Type III pantothenate kinase LDO52_11350 PF00448 SRP54-type protein, GTPase domain LDO52_11350 PF02978 Signal peptide binding domain LDO52_11350 PF02881 SRP54-type protein, helical bundle domain LDO52_11360 PF13737 Transposase DDE domain LDO52_11370 PF01207 Dihydrouridine synthase (Dus) LDO52_11375 PF08378 Nuclease-related domain LDO52_11380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDO52_11380 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDO52_11385 PF00893 Small Multidrug Resistance protein LDO52_11390 PF00834 Ribulose-phosphate 3 epimerase family LDO52_11400 PF00756 Putative esterase LDO52_11410 PF04445 Putative SAM-dependent methyltransferase LDO52_11415 PF02673 Bacitracin resistance protein BacA LDO52_11420 PF00814 Glycoprotease family LDO52_11425 PF00132 Bacterial transferase hexapeptide (six repeats) LDO52_11430 PF00293 NUDIX domain LDO52_11445 PF13737 Transposase DDE domain LDO52_11455 PF00425 chorismate binding enzyme LDO52_11455 PF04715 Anthranilate synthase component I, N terminal region LDO52_11460 PF00155 Aminotransferase class I and II LDO52_11465 PF00815 Histidinol dehydrogenase LDO52_11470 PF01634 ATP phosphoribosyltransferase LDO52_11475 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDO52_11480 PF01722 BolA-like protein LDO52_11485 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LDO52_11490 PF04963 Sigma-54 factor, core binding domain LDO52_11490 PF04552 Sigma-54, DNA binding domain LDO52_11490 PF00309 Sigma-54 factor, Activator interacting domain (AID) LDO52_11520 PF04333 MlaA lipoprotein LDO52_11535 PF00795 Carbon-nitrogen hydrolase LDO52_11540 PF02566 OsmC-like protein LDO52_11550 PF00437 Type II/IV secretion system protein LDO52_11570 PF01367 5'-3' exonuclease, C-terminal SAM fold LDO52_11570 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDO52_11570 PF00476 DNA polymerase family A LDO52_11570 PF01612 3'-5' exonuclease LDO52_11575 PF02325 YGGT family LDO52_11580 PF03807 NADP oxidoreductase coenzyme F420-dependent LDO52_11580 PF14748 Pyrroline-5-carboxylate reductase dimerisation LDO52_11585 PF01171 PP-loop family LDO52_11585 PF09179 TilS substrate binding domain LDO52_11585 PF11734 TilS substrate C-terminal domain LDO52_11590 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LDO52_11595 PF02541 Ppx/GppA phosphatase family LDO52_11600 PF00085 Thioredoxin LDO52_11605 PF07498 Rho termination factor, N-terminal domain LDO52_11605 PF07497 Rho termination factor, RNA-binding domain LDO52_11605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDO52_11615 PF00216 Bacterial DNA-binding protein LDO52_11620 PF03147 Ferredoxin-fold anticodon binding domain LDO52_11620 PF03484 tRNA synthetase B5 domain LDO52_11620 PF03483 B3/4 domain LDO52_11620 PF01588 Putative tRNA binding domain LDO52_11620 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LDO52_11625 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LDO52_11625 PF01409 tRNA synthetases class II core domain (F) LDO52_11635 PF00453 Ribosomal protein L20 LDO52_11640 PF01632 Ribosomal protein L35 LDO52_11645 PF09335 SNARE associated Golgi protein LDO52_11655 PF00043 Glutathione S-transferase, C-terminal domain LDO52_11655 PF02798 Glutathione S-transferase, N-terminal domain LDO52_11660 PF00011 Hsp20/alpha crystallin family LDO52_11670 PF00707 Translation initiation factor IF-3, C-terminal domain LDO52_11670 PF05198 Translation initiation factor IF-3, N-terminal domain LDO52_11675 PF03129 Anticodon binding domain LDO52_11675 PF02824 TGS domain LDO52_11675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDO52_11675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDO52_11685 PF04030 D-arabinono-1,4-lactone oxidase LDO52_11685 PF01565 FAD binding domain LDO52_11690 PF00501 AMP-binding enzyme LDO52_11690 PF13193 AMP-binding enzyme C-terminal domain LDO52_11695 PF00291 Pyridoxal-phosphate dependent enzyme LDO52_11700 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LDO52_11705 PF00593 TonB dependent receptor LDO52_11705 PF07715 TonB-dependent Receptor Plug Domain LDO52_11710 PF01923 Cobalamin adenosyltransferase LDO52_11725 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LDO52_11735 PF00486 Transcriptional regulatory protein, C terminal LDO52_11735 PF00072 Response regulator receiver domain LDO52_11740 PF00672 HAMP domain LDO52_11740 PF00512 His Kinase A (phospho-acceptor) domain LDO52_11740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_11750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_11750 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_11750 PF12806 Acetyl-CoA dehydrogenase C-terminal like LDO52_11750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_11755 PF12806 Acetyl-CoA dehydrogenase C-terminal like LDO52_11755 PF02770 Acyl-CoA dehydrogenase, middle domain LDO52_11755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_11755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LDO52_11765 PF06146 Phosphate-starvation-inducible E LDO52_11785 PF07715 TonB-dependent Receptor Plug Domain LDO52_11785 PF00593 TonB dependent receptor LDO52_11795 PF01336 OB-fold nucleic acid binding domain LDO52_11795 PF00152 tRNA synthetases class II (D, K and N) LDO52_11795 PF02938 GAD domain LDO52_11820 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LDO52_11825 PF00483 Nucleotidyl transferase LDO52_11830 PF04321 RmlD substrate binding domain LDO52_11835 PF16363 GDP-mannose 4,6 dehydratase LDO52_11860 PF01063 Amino-transferase class IV LDO52_11865 PF08335 GlnD PII-uridylyltransferase LDO52_11865 PF03710 Glutamate-ammonia ligase adenylyltransferase LDO52_11870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_11870 PF00512 His Kinase A (phospho-acceptor) domain LDO52_11875 PF04751 Protein of unknown function (DUF615) LDO52_11880 PF00381 PTS HPr component phosphorylation site LDO52_11885 PF03668 P-loop ATPase protein family LDO52_11890 PF02569 Pantoate-beta-alanine ligase LDO52_11895 PF02548 Ketopantoate hydroxymethyltransferase LDO52_11900 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LDO52_11905 PF12626 Polymerase A arginine-rich C-terminus LDO52_11905 PF12627 Probable RNA and SrmB- binding site of polymerase A LDO52_11905 PF01743 Poly A polymerase head domain LDO52_11910 PF10531 SLBB domain LDO52_11915 PF03819 MazG nucleotide pyrophosphohydrolase domain LDO52_11920 PF00106 short chain dehydrogenase LDO52_11945 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LDO52_11945 PF01926 50S ribosome-binding GTPase LDO52_11950 PF13360 PQQ-like domain LDO52_11960 PF03129 Anticodon binding domain LDO52_11960 PF13393 Histidyl-tRNA synthetase LDO52_11965 PF04551 GcpE protein LDO52_11980 PF04055 Radical SAM superfamily LDO52_11985 PF00334 Nucleoside diphosphate kinase LDO52_11990 PF04384 Iron-sulphur cluster assembly LDO52_11995 PF01569 PAP2 superfamily LDO52_12000 PF13439 Glycosyltransferase Family 4 LDO52_12000 PF00534 Glycosyl transferases group 1 LDO52_12010 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LDO52_12010 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LDO52_12015 PF10369 Small subunit of acetolactate synthase LDO52_12020 PF00205 Thiamine pyrophosphate enzyme, central domain LDO52_12020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDO52_12020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDO52_12030 PF09334 tRNA synthetases class I (M) LDO52_12030 PF08264 Anticodon-binding domain of tRNA LDO52_12030 PF00133 tRNA synthetases class I (I, L, M and V) LDO52_12030 PF13603 Leucyl-tRNA synthetase, Domain 2 LDO52_12045 PF01814 Hemerythrin HHE cation binding domain LDO52_12050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LDO52_12055 PF00005 ABC transporter LDO52_12055 PF02687 FtsX-like permease family LDO52_12055 PF12704 MacB-like periplasmic core domain LDO52_12060 PF02321 Outer membrane efflux protein LDO52_12070 PF00899 ThiF family LDO52_12080 PF00929 Exonuclease LDO52_12085 PF03193 RsgA GTPase LDO52_12095 PF00462 Glutaredoxin LDO52_12100 PF02556 Preprotein translocase subunit SecB LDO52_12110 PF01026 TatD related DNase LDO52_12115 PF11738 Protein of unknown function (DUF3298) LDO52_12115 PF13739 Deacetylase PdaC LDO52_12115 PF01522 Polysaccharide deacetylase LDO52_12125 PF03144 Elongation factor Tu domain 2 LDO52_12125 PF16658 Class II release factor RF3, C-terminal domain LDO52_12125 PF00009 Elongation factor Tu GTP binding domain LDO52_12130 PF00563 EAL domain LDO52_12130 PF00990 Diguanylate cyclase, GGDEF domain LDO52_12130 PF03707 Bacterial signalling protein N terminal repeat LDO52_12135 PF11818 C-terminal domain of tail specific protease (DUF3340) LDO52_12135 PF00595 PDZ domain LDO52_12135 PF03572 Peptidase family S41 LDO52_12135 PF17804 Tail specific protease N-terminal domain LDO52_12140 PF00933 Glycosyl hydrolase family 3 N terminal domain LDO52_12155 PF00171 Aldehyde dehydrogenase family LDO52_12160 PF00871 Acetokinase family LDO52_12165 PF07085 DRTGG domain LDO52_12165 PF01515 Phosphate acetyl/butaryl transferase LDO52_12180 PF05683 Fumarase C-terminus LDO52_12180 PF05681 Fumarate hydratase (Fumerase) LDO52_12190 PF07724 AAA domain (Cdc48 subfamily) LDO52_12190 PF10431 C-terminal, D2-small domain, of ClpB protein LDO52_12190 PF06689 ClpX C4-type zinc finger LDO52_12195 PF00574 Clp protease LDO52_12205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO52_12205 PF05698 Bacterial trigger factor protein (TF) C-terminus LDO52_12205 PF05697 Bacterial trigger factor protein (TF) LDO52_12210 PF00593 TonB dependent receptor LDO52_12210 PF07715 TonB-dependent Receptor Plug Domain LDO52_12225 PF18331 PKHD-type hydroxylase C-terminal domain LDO52_12225 PF13640 2OG-Fe(II) oxygenase superfamily LDO52_12230 PF00682 HMGL-like LDO52_12230 PF08502 LeuA allosteric (dimerisation) domain LDO52_12235 PF00561 alpha/beta hydrolase fold LDO52_12240 PF00561 alpha/beta hydrolase fold LDO52_12240 PF07021 Methionine biosynthesis protein MetW LDO52_12250 PF01725 Ham1 family LDO52_12260 PF02416 mttA/Hcf106 family LDO52_12265 PF02416 mttA/Hcf106 family LDO52_12270 PF00902 Sec-independent protein translocase protein (TatC) LDO52_12285 PF01790 Prolipoprotein diacylglyceryl transferase LDO52_12305 PF08212 Lipocalin-like domain LDO52_12310 PF00303 Thymidylate synthase LDO52_12315 PF00186 Dihydrofolate reductase LDO52_12330 PF01625 Peptide methionine sulfoxide reductase LDO52_12340 PF01618 MotA/TolQ/ExbB proton channel family LDO52_12350 PF01842 ACT domain LDO52_12350 PF00551 Formyl transferase LDO52_12355 PF08360 QacR-like protein, C-terminal region LDO52_12355 PF00440 Bacterial regulatory proteins, tetR family LDO52_12360 PF00171 Aldehyde dehydrogenase family LDO52_12365 PF00830 Ribosomal L28 family LDO52_12370 PF00471 Ribosomal protein L33 LDO52_12375 PF02254 TrkA-N domain LDO52_12375 PF00999 Sodium/hydrogen exchanger family LDO52_12395 PF13361 UvrD-like helicase C-terminal domain LDO52_12395 PF00580 UvrD/REP helicase N-terminal domain LDO52_12400 PF02595 Glycerate kinase family LDO52_12410 PF08272 Topoisomerase I zinc-ribbon-like LDO52_12410 PF01131 DNA topoisomerase LDO52_12410 PF01751 Toprim domain LDO52_12410 PF01396 Topoisomerase DNA binding C4 zinc finger LDO52_12425 PF04102 SlyX LDO52_12430 PF00005 ABC transporter LDO52_12430 PF16326 ABC transporter C-terminal domain LDO52_12430 PF12848 ABC transporter LDO52_12435 PF03279 Bacterial lipid A biosynthesis acyltransferase LDO52_12450 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDO52_12450 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDO52_12470 PF01416 tRNA pseudouridine synthase LDO52_12480 PF01176 Translation initiation factor 1A / IF-1 LDO52_12495 PF00180 Isocitrate/isopropylmalate dehydrogenase LDO52_12505 PF00694 Aconitase C-terminal domain LDO52_12510 PF00330 Aconitase family (aconitate hydratase) LDO52_12520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_12520 PF03466 LysR substrate binding domain LDO52_12540 PF00293 NUDIX domain LDO52_12545 PF02896 PEP-utilising enzyme, TIM barrel domain LDO52_12545 PF00391 PEP-utilising enzyme, mobile domain LDO52_12545 PF01590 GAF domain LDO52_12545 PF05524 PEP-utilising enzyme, N-terminal LDO52_12560 PF06628 Catalase-related immune-responsive LDO52_12560 PF00199 Catalase LDO52_12575 PF12706 Beta-lactamase superfamily domain LDO52_12585 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_12585 PF14759 Reductase C-terminal LDO52_12590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LDO52_12595 PF00106 short chain dehydrogenase LDO52_12600 PF00355 Rieske [2Fe-2S] domain LDO52_12605 PF00866 Ring hydroxylating beta subunit LDO52_12610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LDO52_12610 PF00355 Rieske [2Fe-2S] domain LDO52_12615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_12615 PF03466 LysR substrate binding domain LDO52_12620 PF00561 alpha/beta hydrolase fold LDO52_12625 PF03573 outer membrane porin, OprD family LDO52_12630 PF07836 DmpG-like communication domain LDO52_12630 PF00682 HMGL-like LDO52_12635 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation LDO52_12635 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDO52_12640 PF01557 Fumarylacetoacetate (FAA) hydrolase family LDO52_12645 PF13419 Haloacid dehalogenase-like hydrolase LDO52_12650 PF00849 RNA pseudouridylate synthase LDO52_12650 PF01479 S4 domain LDO52_12655 PF12111 Polyribonucleotide phosphorylase C terminal LDO52_12655 PF10150 Ribonuclease E/G family LDO52_12655 PF00575 S1 RNA binding domain LDO52_12660 PF00501 AMP-binding enzyme LDO52_12660 PF13193 AMP-binding enzyme C-terminal domain LDO52_12685 PF04024 PspC domain LDO52_12695 PF00939 Sodium:sulfate symporter transmembrane region LDO52_12710 PF02091 Glycyl-tRNA synthetase alpha subunit LDO52_12715 PF02092 Glycyl-tRNA synthetase beta subunit LDO52_12715 PF05746 DALR anticodon binding domain LDO52_12735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDO52_12735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDO52_12750 PF08241 Methyltransferase domain LDO52_12760 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LDO52_12760 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDO52_12770 PF03884 DNA gyrase inhibitor YacG LDO52_12780 PF00753 Metallo-beta-lactamase superfamily LDO52_12785 PF00762 Ferrochelatase LDO52_12795 PF01177 Asp/Glu/Hydantoin racemase LDO52_12810 PF01206 Sulfurtransferase TusA LDO52_12815 PF00571 CBS domain LDO52_12815 PF03471 Transporter associated domain LDO52_12820 PF00795 Carbon-nitrogen hydrolase LDO52_12830 PF07963 Prokaryotic N-terminal methylation motif LDO52_12830 PF08334 Type II secretion system (T2SS), protein G LDO52_12835 PF00482 Type II secretion system (T2SS), protein F LDO52_12840 PF18074 Primosomal protein N C-terminal domain LDO52_12840 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LDO52_12840 PF00270 DEAD/DEAH box helicase LDO52_12840 PF17764 3′ DNA-binding domain (3′BD) LDO52_12840 PF00271 Helicase conserved C-terminal domain LDO52_12845 PF02254 TrkA-N domain LDO52_12845 PF00999 Sodium/hydrogen exchanger family LDO52_12850 PF01430 Hsp33 protein LDO52_12865 PF04325 Protein of unknown function (DUF465) LDO52_12870 PF00013 KH domain LDO52_12870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LDO52_12870 PF01138 3' exoribonuclease family, domain 1 LDO52_12870 PF03725 3' exoribonuclease family, domain 2 LDO52_12870 PF00575 S1 RNA binding domain LDO52_12875 PF00312 Ribosomal protein S15 LDO52_12880 PF13538 UvrD-like helicase C-terminal domain LDO52_12885 PF13361 UvrD-like helicase C-terminal domain LDO52_12885 PF00580 UvrD/REP helicase N-terminal domain LDO52_12885 PF12705 PD-(D/E)XK nuclease superfamily LDO52_12890 PF17946 RecC C-terminal domain LDO52_12900 PF03976 Polyphosphate kinase 2 (PPK2) LDO52_12910 PF01209 ubiE/COQ5 methyltransferase family LDO52_12920 PF03109 ABC1 family LDO52_12940 PF17674 HHH domain LDO52_12940 PF00575 S1 RNA binding domain LDO52_12940 PF09371 Tex-like protein N-terminal domain LDO52_12940 PF16921 Tex protein YqgF-like domain LDO52_12945 PF00486 Transcriptional regulatory protein, C terminal LDO52_12945 PF00072 Response regulator receiver domain LDO52_12950 PF00672 HAMP domain LDO52_12950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_12950 PF00512 His Kinase A (phospho-acceptor) domain LDO52_12955 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LDO52_12955 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LDO52_12960 PF01323 DSBA-like thioredoxin domain LDO52_12990 PF00183 Hsp90 protein LDO52_12990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_13000 PF03922 OmpW family LDO52_13005 PF03553 Na+/H+ antiporter family LDO52_13005 PF13726 Na+-H+ antiporter family LDO52_13025 PF04997 RNA polymerase Rpb1, domain 1 LDO52_13025 PF00623 RNA polymerase Rpb1, domain 2 LDO52_13025 PF04983 RNA polymerase Rpb1, domain 3 LDO52_13025 PF05000 RNA polymerase Rpb1, domain 4 LDO52_13025 PF04998 RNA polymerase Rpb1, domain 5 LDO52_13030 PF10385 RNA polymerase beta subunit external 1 domain LDO52_13030 PF04560 RNA polymerase Rpb2, domain 7 LDO52_13030 PF00562 RNA polymerase Rpb2, domain 6 LDO52_13030 PF04565 RNA polymerase Rpb2, domain 3 LDO52_13030 PF04563 RNA polymerase beta subunit LDO52_13030 PF04561 RNA polymerase Rpb2, domain 2 LDO52_13040 PF16320 Ribosomal protein L7/L12 dimerisation domain LDO52_13040 PF00542 Ribosomal protein L7/L12 C-terminal domain LDO52_13045 PF00466 Ribosomal protein L10 LDO52_13050 PF00687 Ribosomal protein L1p/L10e family LDO52_13055 PF00298 Ribosomal protein L11, RNA binding domain LDO52_13055 PF03946 Ribosomal protein L11, N-terminal domain LDO52_13060 PF02357 Transcription termination factor nusG LDO52_13060 PF00467 KOW motif LDO52_13065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LDO52_13075 PF00009 Elongation factor Tu GTP binding domain LDO52_13075 PF03143 Elongation factor Tu C-terminal domain LDO52_13075 PF03144 Elongation factor Tu domain 2 LDO52_13100 PF04715 Anthranilate synthase component I, N terminal region LDO52_13100 PF00425 chorismate binding enzyme LDO52_13105 PF13419 Haloacid dehalogenase-like hydrolase LDO52_13110 PF16697 Inner membrane component of T3SS, cytoplasmic domain LDO52_13115 PF00263 Bacterial type II and III secretion system protein LDO52_13115 PF03958 Bacterial type II/III secretion system short domain LDO52_13130 PF00816 H-NS histone family LDO52_13155 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LDO52_13155 PF03900 Porphobilinogen deaminase, C-terminal domain LDO52_13160 PF04397 LytTr DNA-binding domain LDO52_13160 PF00072 Response regulator receiver domain LDO52_13165 PF06580 Histidine kinase LDO52_13165 PF07694 5TMR of 5TMR-LYT LDO52_13165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_13170 PF14698 Argininosuccinate lyase C-terminal LDO52_13170 PF00206 Lyase LDO52_13175 PF04362 Bacterial Fe(2+) trafficking LDO52_13180 PF01066 CDP-alcohol phosphatidyltransferase LDO52_13190 PF01541 GIY-YIG catalytic domain LDO52_13190 PF02151 UvrB/uvrC motif LDO52_13190 PF08459 UvrC Helix-hairpin-helix N-terminal LDO52_13195 PF07724 AAA domain (Cdc48 subfamily) LDO52_13195 PF10431 C-terminal, D2-small domain, of ClpB protein LDO52_13205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LDO52_13205 PF00378 Enoyl-CoA hydratase/isomerase LDO52_13205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LDO52_13210 PF00108 Thiolase, N-terminal domain LDO52_13210 PF02803 Thiolase, C-terminal domain LDO52_13225 PF09313 Domain of unknown function (DUF1971) LDO52_13225 PF03848 Tellurite resistance protein TehB LDO52_13265 PF00475 Imidazoleglycerol-phosphate dehydratase LDO52_13270 PF00117 Glutamine amidotransferase class-I LDO52_13285 PF00977 Histidine biosynthesis protein LDO52_13295 PF01266 FAD dependent oxidoreductase LDO52_13300 PF00324 Amino acid permease LDO52_13320 PF01636 Phosphotransferase enzyme family LDO52_13325 PF00977 Histidine biosynthesis protein LDO52_13355 PF02705 K+ potassium transporter LDO52_13380 PF01593 Flavin containing amine oxidoreductase LDO52_13385 PF05726 Pirin C-terminal cupin domain LDO52_13385 PF02678 Pirin LDO52_13390 PF00857 Isochorismatase family LDO52_13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_13395 PF03466 LysR substrate binding domain LDO52_13400 PF00578 AhpC/TSA family LDO52_13400 PF10417 C-terminal domain of 1-Cys peroxiredoxin LDO52_13405 PF00436 Single-strand binding protein family LDO52_13410 PF07690 Major Facilitator Superfamily LDO52_13420 PF02581 Thiamine monophosphate synthase LDO52_13420 PF08543 Phosphomethylpyrimidine kinase LDO52_13420 PF03070 TENA/THI-4/PQQC family LDO52_13430 PF17755 UvrA DNA-binding domain LDO52_13430 PF17760 UvrA interaction domain LDO52_13440 PF00990 Diguanylate cyclase, GGDEF domain LDO52_13450 PF02028 BCCT, betaine/carnitine/choline family transporter LDO52_13460 PF00474 Sodium:solute symporter family LDO52_13465 PF04341 Protein of unknown function, DUF485 LDO52_13470 PF00072 Response regulator receiver domain LDO52_13470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_13470 PF00512 His Kinase A (phospho-acceptor) domain LDO52_13470 PF09456 RcsC Alpha-Beta-Loop (ABL) LDO52_13480 PF00072 Response regulator receiver domain LDO52_13480 PF00196 Bacterial regulatory proteins, luxR family LDO52_13485 PF03358 NADPH-dependent FMN reductase LDO52_13490 PF00296 Luciferase-like monooxygenase LDO52_13495 PF00677 Lumazine binding domain LDO52_13500 PF00875 DNA photolyase LDO52_13500 PF03441 FAD binding domain of DNA photolyase LDO52_13505 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LDO52_13505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LDO52_13510 PF16177 Acetyl-coenzyme A synthetase N-terminus LDO52_13510 PF00501 AMP-binding enzyme LDO52_13510 PF13193 AMP-binding enzyme C-terminal domain LDO52_13515 PF05656 Protein of unknown function (DUF805) LDO52_13520 PF00924 Mechanosensitive ion channel LDO52_13525 PF04452 RNA methyltransferase LDO52_13530 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LDO52_13535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDO52_13560 PF01368 DHH family LDO52_13560 PF02272 DHHA1 domain LDO52_13560 PF17768 RecJ OB domain LDO52_13565 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LDO52_13565 PF01243 Pyridoxamine 5'-phosphate oxidase LDO52_13570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDO52_13570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDO52_13570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDO52_13570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDO52_13575 PF00478 IMP dehydrogenase / GMP reductase domain LDO52_13575 PF00571 CBS domain LDO52_13580 PF03692 Putative zinc- or iron-chelating domain LDO52_13585 PF01613 Flavin reductase like domain LDO52_13585 PF00258 Flavodoxin LDO52_13590 PF01169 Uncharacterized protein family UPF0016 LDO52_13595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LDO52_13595 PF00364 Biotin-requiring enzyme LDO52_13595 PF02817 e3 binding domain LDO52_13600 PF00456 Transketolase, thiamine diphosphate binding domain LDO52_13600 PF17831 Pyruvate dehydrogenase E1 component middle domain LDO52_13615 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LDO52_13620 PF12327 FtsZ family, C-terminal domain LDO52_13620 PF00091 Tubulin/FtsZ family, GTPase domain LDO52_13625 PF02491 SHS2 domain inserted in FTSA LDO52_13630 PF08478 POTRA domain, FtsQ-type LDO52_13630 PF03799 Cell division protein FtsQ LDO52_13635 PF01820 D-ala D-ala ligase N-terminus LDO52_13635 PF07478 D-ala D-ala ligase C-terminus LDO52_13640 PF02875 Mur ligase family, glutamate ligase domain LDO52_13640 PF01225 Mur ligase family, catalytic domain LDO52_13640 PF08245 Mur ligase middle domain LDO52_13645 PF04101 Glycosyltransferase family 28 C-terminal domain LDO52_13645 PF03033 Glycosyltransferase family 28 N-terminal domain LDO52_13660 PF07690 Major Facilitator Superfamily LDO52_13665 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LDO52_13665 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LDO52_13680 PF07731 Multicopper oxidase LDO52_13680 PF07732 Multicopper oxidase LDO52_13680 PF00394 Multicopper oxidase LDO52_13685 PF05275 Copper resistance protein B precursor (CopB) LDO52_13695 PF00313 'Cold-shock' DNA-binding domain LDO52_13700 PF00156 Phosphoribosyl transferase domain LDO52_13705 PF03372 Endonuclease/Exonuclease/phosphatase family LDO52_13710 PF03960 ArsC family LDO52_13720 PF07859 alpha/beta hydrolase fold LDO52_13725 PF02525 Flavodoxin-like fold LDO52_13730 PF00990 Diguanylate cyclase, GGDEF domain LDO52_13735 PF11412 Disulphide bond corrector protein DsbC LDO52_13735 PF02683 Cytochrome C biogenesis protein transmembrane region LDO52_13760 PF00583 Acetyltransferase (GNAT) family LDO52_13785 PF00204 DNA gyrase B LDO52_13785 PF00986 DNA gyrase B subunit, carboxyl terminus LDO52_13785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_13785 PF01751 Toprim domain LDO52_13790 PF05728 Uncharacterised protein family (UPF0227) LDO52_13800 PF02600 Disulfide bond formation protein DsbB LDO52_13805 PF04262 Glutamate-cysteine ligase LDO52_13820 PF04286 Protein of unknown function (DUF445) LDO52_13830 PF05746 DALR anticodon binding domain LDO52_13830 PF00750 tRNA synthetases class I (R) LDO52_13830 PF03485 Arginyl tRNA synthetase N terminal domain LDO52_13840 PF02666 Phosphatidylserine decarboxylase LDO52_13845 PF00581 Rhodanese-like domain LDO52_13850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LDO52_13850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LDO52_13860 PF06628 Catalase-related immune-responsive LDO52_13860 PF00199 Catalase LDO52_13865 PF02580 D-Tyr-tRNA(Tyr) deacylase LDO52_13890 PF01758 Sodium Bile acid symporter family LDO52_13895 PF00857 Isochorismatase family LDO52_13900 PF13737 Transposase DDE domain LDO52_13905 PF07690 Major Facilitator Superfamily LDO52_13910 PF00701 Dihydrodipicolinate synthetase family LDO52_13920 PF01259 SAICAR synthetase LDO52_13925 PF00004 ATPase family associated with various cellular activities (AAA) LDO52_13925 PF16193 AAA C-terminal domain LDO52_13925 PF12002 MgsA AAA+ ATPase C terminal LDO52_13930 PF00563 EAL domain LDO52_13930 PF00990 Diguanylate cyclase, GGDEF domain LDO52_13930 PF03707 Bacterial signalling protein N terminal repeat LDO52_13935 PF03692 Putative zinc- or iron-chelating domain LDO52_13940 PF07043 Protein of unknown function (DUF1328) LDO52_13945 PF03023 Lipid II flippase MurJ LDO52_13950 PF01510 N-acetylmuramoyl-L-alanine amidase LDO52_13955 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LDO52_13955 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LDO52_13965 PF01138 3' exoribonuclease family, domain 1 LDO52_13965 PF03725 3' exoribonuclease family, domain 2 LDO52_13970 PF00440 Bacterial regulatory proteins, tetR family LDO52_13990 PF01323 DSBA-like thioredoxin domain LDO52_14000 PF13419 Haloacid dehalogenase-like hydrolase LDO52_14005 PF00106 short chain dehydrogenase LDO52_14035 PF00696 Amino acid kinase family LDO52_14035 PF00583 Acetyltransferase (GNAT) family LDO52_14040 PF09084 NMT1/THI5 like LDO52_14045 PF09084 NMT1/THI5 like LDO52_14050 PF00296 Luciferase-like monooxygenase LDO52_14055 PF00528 Binding-protein-dependent transport system inner membrane component LDO52_14060 PF00005 ABC transporter LDO52_14065 PF08362 YcdC-like protein, C-terminal region LDO52_14065 PF00440 Bacterial regulatory proteins, tetR family LDO52_14075 PF06574 FAD synthetase LDO52_14075 PF01687 Riboflavin kinase LDO52_14080 PF08264 Anticodon-binding domain of tRNA LDO52_14080 PF06827 Zinc finger found in FPG and IleRS LDO52_14080 PF00133 tRNA synthetases class I (I, L, M and V) LDO52_14085 PF01252 Signal peptidase (SPase) II LDO52_14090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDO52_14100 PF07995 Glucose / Sorbosone dehydrogenase LDO52_14135 PF00579 tRNA synthetases class I (W and Y) LDO52_14140 PF03702 Anhydro-N-acetylmuramic acid kinase LDO52_14145 PF13406 Transglycosylase SLT domain LDO52_14150 PF02222 ATP-grasp domain LDO52_14150 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LDO52_14155 PF00731 AIR carboxylase LDO52_14165 PF08245 Mur ligase middle domain LDO52_14165 PF02875 Mur ligase family, glutamate ligase domain LDO52_14165 PF01225 Mur ligase family, catalytic domain LDO52_14170 PF08240 Alcohol dehydrogenase GroES-like domain LDO52_14170 PF00107 Zinc-binding dehydrogenase LDO52_14170 PF13823 Alcohol dehydrogenase GroES-associated LDO52_14180 PF14542 GCN5-related N-acetyl-transferase LDO52_14185 PF07690 Major Facilitator Superfamily LDO52_14190 PF03741 Integral membrane protein TerC family LDO52_14195 PF01979 Amidohydrolase family LDO52_14200 PF00156 Phosphoribosyl transferase domain LDO52_14210 PF10411 Disulfide bond isomerase protein N-terminus LDO52_14210 PF13098 Thioredoxin-like domain LDO52_14215 PF07690 Major Facilitator Superfamily LDO52_14220 PF10396 GTP-binding protein TrmE N-terminus LDO52_14220 PF01926 50S ribosome-binding GTPase LDO52_14220 PF12631 MnmE helical domain LDO52_14225 PF14849 YidC periplasmic domain LDO52_14225 PF02096 60Kd inner membrane protein LDO52_14230 PF01809 Putative membrane protein insertion efficiency factor LDO52_14235 PF00825 Ribonuclease P LDO52_14240 PF00468 Ribosomal protein L34 LDO52_14290 PF01545 Cation efflux family LDO52_14295 PF13411 MerR HTH family regulatory protein LDO52_14320 PF05973 Phage derived protein Gp49-like (DUF891) LDO52_14330 PF00392 Bacterial regulatory proteins, gntR family LDO52_14330 PF00155 Aminotransferase class I and II LDO52_14340 PF01381 Helix-turn-helix LDO52_14345 PF05973 Phage derived protein Gp49-like (DUF891) LDO52_14360 PF13610 DDE domain LDO52_14405 PF13356 Arm DNA-binding domain LDO52_14405 PF00589 Phage integrase family LDO52_14410 PF00550 Phosphopantetheine attachment site LDO52_14410 PF00698 Acyl transferase domain LDO52_14410 PF08240 Alcohol dehydrogenase GroES-like domain LDO52_14410 PF00107 Zinc-binding dehydrogenase LDO52_14410 PF16197 Ketoacyl-synthetase C-terminal extension LDO52_14410 PF08659 KR domain LDO52_14410 PF14765 Polyketide synthase dehydratase LDO52_14410 PF00109 Beta-ketoacyl synthase, N-terminal domain LDO52_14410 PF02801 Beta-ketoacyl synthase, C-terminal domain LDO52_14415 PF03466 LysR substrate binding domain LDO52_14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_14420 PF12833 Helix-turn-helix domain LDO52_14420 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LDO52_14425 PF06628 Catalase-related immune-responsive LDO52_14425 PF00199 Catalase LDO52_14430 PF00290 Tryptophan synthase alpha chain LDO52_14435 PF00291 Pyridoxal-phosphate dependent enzyme LDO52_14440 PF03466 LysR substrate binding domain LDO52_14440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_14445 PF01385 Probable transposase LDO52_14445 PF12323 Helix-turn-helix domain LDO52_14445 PF07282 Putative transposase DNA-binding domain LDO52_14460 PF09297 NADH pyrophosphatase zinc ribbon domain LDO52_14460 PF00293 NUDIX domain LDO52_14500 PF00512 His Kinase A (phospho-acceptor) domain LDO52_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_14500 PF08521 Two-component sensor kinase N-terminal LDO52_14505 PF00486 Transcriptional regulatory protein, C terminal LDO52_14505 PF00072 Response regulator receiver domain LDO52_14525 PF00072 Response regulator receiver domain LDO52_14525 PF00990 Diguanylate cyclase, GGDEF domain LDO52_14535 PF00582 Universal stress protein family LDO52_14545 PF13610 DDE domain LDO52_14585 PF00873 AcrB/AcrD/AcrF family LDO52_14590 PF01545 Cation efflux family LDO52_14595 PF00239 Resolvase, N terminal domain LDO52_14595 PF02796 Helix-turn-helix domain of resolvase LDO52_14600 PF07715 TonB-dependent Receptor Plug Domain LDO52_14600 PF00593 TonB dependent receptor LDO52_14605 PF13610 DDE domain LDO52_14620 PF13954 PapC N-terminal domain LDO52_14620 PF00577 Outer membrane usher protein LDO52_14620 PF13953 PapC C-terminal domain LDO52_14630 PF13610 DDE domain LDO52_14635 PF00107 Zinc-binding dehydrogenase LDO52_14635 PF08240 Alcohol dehydrogenase GroES-like domain LDO52_14650 PF06100 MCRA family LDO52_14655 PF13359 DDE superfamily endonuclease LDO52_14655 PF13613 Helix-turn-helix of DDE superfamily endonuclease LDO52_14670 PF01047 MarR family LDO52_14675 PF02566 OsmC-like protein LDO52_14710 PF13817 IS66 C-terminal element LDO52_14710 PF13007 Transposase C of IS166 homeodomain LDO52_14710 PF03050 Transposase IS66 family LDO52_14710 PF13005 zinc-finger binding domain of transposase IS66 LDO52_14715 PF13737 Transposase DDE domain LDO52_14725 PF03788 LrgA family LDO52_14730 PF03466 LysR substrate binding domain LDO52_14730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDO52_14735 PF01925 Sulfite exporter TauE/SafE LDO52_14740 PF01613 Flavin reductase like domain LDO52_14745 PF08267 Cobalamin-independent synthase, N-terminal domain LDO52_14745 PF01717 Cobalamin-independent synthase, Catalytic domain LDO52_14755 PF01070 FMN-dependent dehydrogenase LDO52_14760 PF07729 FCD domain LDO52_14760 PF00392 Bacterial regulatory proteins, gntR family LDO52_14765 PF02652 L-lactate permease LDO52_14800 PF00155 Aminotransferase class I and II LDO52_14805 PF00202 Aminotransferase class-III LDO52_14805 PF06968 Biotin and Thiamin Synthesis associated domain LDO52_14805 PF04055 Radical SAM superfamily LDO52_14810 PF12697 Alpha/beta hydrolase family LDO52_14810 PF08241 Methyltransferase domain LDO52_14815 PF06968 Biotin and Thiamin Synthesis associated domain LDO52_14815 PF04055 Radical SAM superfamily LDO52_14860 PF00465 Iron-containing alcohol dehydrogenase LDO52_14875 PF00171 Aldehyde dehydrogenase family LDO52_14885 PF00593 TonB dependent receptor LDO52_14885 PF07715 TonB-dependent Receptor Plug Domain LDO52_14910 PF00581 Rhodanese-like domain LDO52_14915 PF01925 Sulfite exporter TauE/SafE LDO52_14920 PF00753 Metallo-beta-lactamase superfamily LDO52_14930 PF04143 Sulphur transport LDO52_14945 PF13098 Thioredoxin-like domain LDO52_14950 PF08534 Redoxin LDO52_14955 PF02683 Cytochrome C biogenesis protein transmembrane region LDO52_14955 PF11412 Disulphide bond corrector protein DsbC LDO52_14960 PF00486 Transcriptional regulatory protein, C terminal LDO52_14960 PF00072 Response regulator receiver domain LDO52_14965 PF00512 His Kinase A (phospho-acceptor) domain LDO52_14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDO52_14965 PF08521 Two-component sensor kinase N-terminal LDO52_14980 PF13614 AAA domain LDO52_14985 PF17762 HTH domain found in ParB protein LDO52_14985 PF02195 ParB-like nuclease domain LDO52_14990 PF00990 Diguanylate cyclase, GGDEF domain LDO52_14990 PF00072 Response regulator receiver domain LDO52_14995 PF02384 N-6 DNA Methylase LDO52_14995 PF12161 HsdM N-terminal domain LDO52_15010 PF18766 SWI2/SNF2 ATPase LDO52_15010 PF12008 Type I restriction and modification enzyme - subunit R C terminal LDO52_15010 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LDO52_15015 PF03960 ArsC family LDO52_15030 PF01022 Bacterial regulatory protein, arsR family LDO52_15040 PF01758 Sodium Bile acid symporter family LDO52_15045 PF03358 NADPH-dependent FMN reductase LDO52_15060 PF09905 DNA-binding protein VF530 LDO52_15080 PF00176 SNF2 family N-terminal domain LDO52_15080 PF00271 Helicase conserved C-terminal domain LDO52_15080 PF12419 SNF2 Helicase protein LDO52_15085 PF07804 HipA-like C-terminal domain LDO52_15085 PF13657 HipA N-terminal domain LDO52_15145 PF13737 Transposase DDE domain LDO52_15175 PF13635 Domain of unknown function (DUF4143) LDO52_15175 PF13173 AAA domain LDO52_15250 PF02661 Fic/DOC family LDO52_15320 PF05973 Phage derived protein Gp49-like (DUF891) LDO52_15325 PF01381 Helix-turn-helix LDO52_15345 PF12848 ABC transporter LDO52_15345 PF00005 ABC transporter LDO52_15350 PF01636 Phosphotransferase enzyme family LDO52_15360 PF13610 DDE domain LDO52_15370 PF07690 Major Facilitator Superfamily LDO52_15380 PF02796 Helix-turn-helix domain of resolvase LDO52_15380 PF00239 Resolvase, N terminal domain LDO52_15385 PF01545 Cation efflux family LDO52_15390 PF00873 AcrB/AcrD/AcrF family LDO52_15455 PF02661 Fic/DOC family LDO52_15465 PF01051 Initiator Replication protein LDO52_15470 PF17762 HTH domain found in ParB protein LDO52_15470 PF02195 ParB-like nuclease domain LDO52_15475 PF13614 AAA domain LDO52_15490 PF13610 DDE domain LDO52_15510 PF13610 DDE domain LDO52_15520 PF00394 Multicopper oxidase LDO52_15520 PF07731 Multicopper oxidase LDO52_15520 PF07732 Multicopper oxidase LDO52_15535 PF04221 RelB antitoxin LDO52_15565 PF13005 zinc-finger binding domain of transposase IS66 LDO52_15565 PF13007 Transposase C of IS166 homeodomain LDO52_15565 PF13817 IS66 C-terminal element LDO52_15565 PF03050 Transposase IS66 family LDO52_15575 PF02796 Helix-turn-helix domain of resolvase LDO52_15575 PF00239 Resolvase, N terminal domain LDO52_15615 PF01661 Macro domain LDO52_15625 PF00149 Calcineurin-like phosphoesterase LDO52_15660 PF13614 AAA domain LDO52_15665 PF01051 Initiator Replication protein LDO52_15670 PF11867 Domain of unknown function (DUF3387) LDO52_15670 PF18766 SWI2/SNF2 ATPase LDO52_15670 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LDO52_15700 PF13700 Domain of unknown function (DUF4158) LDO52_15700 PF01526 Tn3 transposase DDE domain LDO52_15705 PF02796 Helix-turn-helix domain of resolvase LDO52_15705 PF00239 Resolvase, N terminal domain LDO52_15715 PF02522 Aminoglycoside 3-N-acetyltransferase LDO52_15745 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LDO52_15755 PF02332 Methane/Phenol/Toluene Hydroxylase LDO52_15765 PF00809 Pterin binding enzyme LDO52_15775 PF00186 Dihydrofolate reductase LDO52_15780 PF02082 Transcriptional regulator LDO52_15785 PF01242 6-pyruvoyl tetrahydropterin synthase LDO52_15800 PF02796 Helix-turn-helix domain of resolvase LDO52_15800 PF00239 Resolvase, N terminal domain LDO52_15805 PF01494 FAD binding domain LDO52_15810 PF13495 Phage integrase, N-terminal SAM-like domain LDO52_15810 PF00589 Phage integrase family LDO52_15815 PF13610 DDE domain LDO52_15830 PF12697 Alpha/beta hydrolase family LDO52_15835 PF01494 FAD binding domain LDO52_15860 PF00239 Resolvase, N terminal domain LDO52_15860 PF02796 Helix-turn-helix domain of resolvase LDO52_15865 PF01494 FAD binding domain LDO52_15870 PF13495 Phage integrase, N-terminal SAM-like domain LDO52_15870 PF00589 Phage integrase family LDO52_15875 PF13610 DDE domain LDO52_15885 PF12697 Alpha/beta hydrolase family LDO52_15890 PF01494 FAD binding domain LDO52_15915 PF04463 Protein of unknown function (DUF523) LDO52_15920 PF13427 Domain of unknown function (DUF4111) LDO52_15920 PF01909 Nucleotidyltransferase domain LDO52_15950 PF01545 Cation efflux family LDO52_15960 PF13411 MerR HTH family regulatory protein LDO52_15965 PF13356 Arm DNA-binding domain LDO52_15965 PF00589 Phage integrase family LDO52_15980 PF04233 Phage Mu protein F like protein LDO52_16020 PF02384 N-6 DNA Methylase LDO52_16025 PF01420 Type I restriction modification DNA specificity domain LDO52_16060 PF04221 RelB antitoxin LDO52_16080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LDO52_16090 PF01051 Initiator Replication protein LDO52_16105 PF02796 Helix-turn-helix domain of resolvase LDO52_16105 PF00239 Resolvase, N terminal domain LDO52_16145 PF13613 Helix-turn-helix of DDE superfamily endonuclease LDO52_16145 PF13359 DDE superfamily endonuclease LDO52_16175 PF01051 Initiator Replication protein LDO52_16185 PF12848 ABC transporter LDO52_16185 PF00005 ABC transporter LDO52_16190 PF01636 Phosphotransferase enzyme family LDO52_16220 PF01051 Initiator Replication protein LDO52_16235 PF03389 MobA/MobL family LDO52_16265 PF03432 Relaxase/Mobilisation nuclease domain LDO52_16305 PF01051 Initiator Replication protein LDO52_16320 PF00216 Bacterial DNA-binding protein LDO52_16330 PF03389 MobA/MobL family LDO52_16350 PF03389 MobA/MobL family LDO52_16360 PF01051 Initiator Replication protein