locus-tag class description IC774_00005 PF00308 Bacterial dnaA protein IC774_00005 PF08299 Bacterial dnaA protein helix-turn-helix IC774_00005 PF11638 DnaA N-terminal domain IC774_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain IC774_00010 PF02767 DNA polymerase III beta subunit, central domain IC774_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain IC774_00015 PF02463 RecF/RecN/SMC N terminal domain IC774_00030 PF09335 SNARE associated Golgi protein IC774_00035 PF00005 ABC transporter IC774_00035 PF12848 ABC transporter IC774_00055 PF01521 Iron-sulphur cluster biosynthesis IC774_00060 PF00561 alpha/beta hydrolase fold IC774_00065 PF03702 Anhydro-N-acetylmuramic acid kinase IC774_00070 PF00579 tRNA synthetases class I (W and Y) IC774_00100 PF02798 Glutathione S-transferase, N-terminal domain IC774_00110 PF00209 Sodium:neurotransmitter symporter family IC774_00125 PF00551 Formyl transferase IC774_00125 PF02911 Formyl transferase, C-terminal domain IC774_00130 PF00920 Dehydratase family IC774_00145 PF03466 LysR substrate binding domain IC774_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_00150 PF00860 Permease family IC774_00155 PF00311 Phosphoenolpyruvate carboxylase IC774_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region IC774_00160 PF00440 Bacterial regulatory proteins, tetR family IC774_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC774_00170 PF00873 AcrB/AcrD/AcrF family IC774_00180 PF00684 DnaJ central domain IC774_00180 PF01556 DnaJ C terminal domain IC774_00180 PF00226 DnaJ domain IC774_00190 PF05173 Dihydrodipicolinate reductase, C-terminus IC774_00190 PF01113 Dihydrodipicolinate reductase, N-terminus IC774_00200 PF07690 Major Facilitator Superfamily IC774_00205 PF00248 Aldo/keto reductase family IC774_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_00210 PF03466 LysR substrate binding domain IC774_00230 PF00107 Zinc-binding dehydrogenase IC774_00230 PF08240 Alcohol dehydrogenase GroES-like domain IC774_00250 PF00633 Helix-hairpin-helix motif IC774_00250 PF10576 Iron-sulfur binding domain of endonuclease III IC774_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein IC774_00250 PF14815 NUDIX domain IC774_00265 PF07043 Protein of unknown function (DUF1328) IC774_00270 PF03692 Putative zinc- or iron-chelating domain IC774_00275 PF07995 Glucose / Sorbosone dehydrogenase IC774_00280 PF12002 MgsA AAA+ ATPase C terminal IC774_00280 PF16193 AAA C-terminal domain IC774_00280 PF00004 ATPase family associated with various cellular activities (AAA) IC774_00295 PF01259 SAICAR synthetase IC774_00305 PF00701 Dihydrodipicolinate synthetase family IC774_00310 PF00857 Isochorismatase family IC774_00315 PF01758 Sodium Bile acid symporter family IC774_00320 PF01554 MatE IC774_00325 PF04463 Protein of unknown function (DUF523) IC774_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC774_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC774_00345 PF02798 Glutathione S-transferase, N-terminal domain IC774_00345 PF14497 Glutathione S-transferase, C-terminal domain IC774_00355 PF00324 Amino acid permease IC774_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC774_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain IC774_00375 PF00392 Bacterial regulatory proteins, gntR family IC774_00375 PF07702 UTRA domain IC774_00380 PF05962 HutD IC774_00385 PF01175 Urocanase Rossmann-like domain IC774_00385 PF17391 Urocanase N-terminal domain IC774_00385 PF17392 Urocanase C-terminal domain IC774_00390 PF00221 Aromatic amino acid lyase IC774_00395 PF00324 Amino acid permease IC774_00400 PF01979 Amidohydrolase family IC774_00405 PF00491 Arginase family IC774_00415 PF13419 Haloacid dehalogenase-like hydrolase IC774_00420 PF01177 Asp/Glu/Hydantoin racemase IC774_00425 PF01810 LysE type translocator IC774_00455 PF01380 SIS domain IC774_00460 PF00132 Bacterial transferase hexapeptide (six repeats) IC774_00460 PF14602 Hexapeptide repeat of succinyl-transferase IC774_00460 PF12804 MobA-like NTP transferase domain IC774_00465 PF04608 Phosphatidylglycerophosphatase A IC774_00470 PF02769 AIR synthase related protein, C-terminal domain IC774_00470 PF00586 AIR synthase related protein, N-terminal domain IC774_00475 PF01029 NusB family IC774_00480 PF00885 6,7-dimethyl-8-ribityllumazine synthase IC774_00485 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IC774_00485 PF00925 GTP cyclohydrolase II IC774_00510 PF02580 D-Tyr-tRNA(Tyr) deacylase IC774_00515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IC774_00515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IC774_00520 PF00581 Rhodanese-like domain IC774_00525 PF02666 Phosphatidylserine decarboxylase IC774_00530 PF03069 Acetamidase/Formamidase family IC774_00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_00540 PF00512 His Kinase A (phospho-acceptor) domain IC774_00540 PF11808 Phosphate regulon sensor protein PhoR IC774_00540 PF00989 PAS fold IC774_00545 PF00072 Response regulator receiver domain IC774_00545 PF00486 Transcriptional regulatory protein, C terminal IC774_00555 PF00106 short chain dehydrogenase IC774_00560 PF01554 MatE IC774_00565 PF00155 Aminotransferase class I and II IC774_00570 PF04286 Protein of unknown function (DUF445) IC774_00585 PF04262 Glutamate-cysteine ligase IC774_00590 PF02600 Disulfide bond formation protein DsbB IC774_00595 PF13296 Putative type VI secretion system Rhs element Vgr IC774_00595 PF04717 Type VI secretion system, phage-baseplate injector IC774_00595 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IC774_00660 PF05728 Uncharacterised protein family (UPF0227) IC774_00670 PF04115 Ureidoglycolate lyase IC774_00675 PF03561 Allantoicase repeat IC774_00680 PF01494 FAD binding domain IC774_00695 PF00576 HIUase/Transthyretin family IC774_00715 PF07722 Peptidase C26 IC774_00715 PF12796 Ankyrin repeats (3 copies) IC774_00730 PF00990 Diguanylate cyclase, GGDEF domain IC774_00730 PF17151 Periplasmic sensor domain IC774_00735 PF07859 alpha/beta hydrolase fold IC774_00745 PF03960 ArsC family IC774_00750 PF03372 Endonuclease/Exonuclease/phosphatase family IC774_00755 PF00156 Phosphoribosyl transferase domain IC774_00765 PF00593 TonB dependent receptor IC774_00765 PF07715 TonB-dependent Receptor Plug Domain IC774_00775 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IC774_00775 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IC774_00780 PF04101 Glycosyltransferase family 28 C-terminal domain IC774_00780 PF03033 Glycosyltransferase family 28 N-terminal domain IC774_00785 PF01225 Mur ligase family, catalytic domain IC774_00785 PF08245 Mur ligase middle domain IC774_00785 PF02875 Mur ligase family, glutamate ligase domain IC774_00790 PF01820 D-ala D-ala ligase N-terminus IC774_00790 PF07478 D-ala D-ala ligase C-terminus IC774_00795 PF08478 POTRA domain, FtsQ-type IC774_00795 PF03799 Cell division protein FtsQ IC774_00800 PF02491 SHS2 domain inserted in FTSA IC774_00805 PF00091 Tubulin/FtsZ family, GTPase domain IC774_00805 PF12327 FtsZ family, C-terminal domain IC774_00810 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IC774_00820 PF01551 Peptidase family M23 IC774_00825 PF00456 Transketolase, thiamine diphosphate binding domain IC774_00825 PF17831 Pyruvate dehydrogenase E1 component middle domain IC774_00830 PF02817 e3 binding domain IC774_00830 PF00364 Biotin-requiring enzyme IC774_00830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC774_00840 PF01169 Uncharacterized protein family UPF0016 IC774_00845 PF01613 Flavin reductase like domain IC774_00845 PF00258 Flavodoxin IC774_00850 PF03692 Putative zinc- or iron-chelating domain IC774_00855 PF00571 CBS domain IC774_00855 PF00478 IMP dehydrogenase / GMP reductase domain IC774_00860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC774_00860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC774_00860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC774_00860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC774_00865 PF01243 Pyridoxamine 5'-phosphate oxidase IC774_00865 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IC774_00870 PF02272 DHHA1 domain IC774_00870 PF17768 RecJ OB domain IC774_00870 PF01368 DHH family IC774_00890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC774_00895 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IC774_00900 PF04452 RNA methyltransferase IC774_00905 PF00924 Mechanosensitive ion channel IC774_00905 PF05552 Conserved TM helix IC774_00915 PF13193 AMP-binding enzyme C-terminal domain IC774_00915 PF00501 AMP-binding enzyme IC774_00915 PF16177 Acetyl-coenzyme A synthetase N-terminus IC774_00920 PF00857 Isochorismatase family IC774_00925 PF01037 Lrp/AsnC ligand binding domain IC774_00935 PF03358 NADPH-dependent FMN reductase IC774_00940 PF00196 Bacterial regulatory proteins, luxR family IC774_00940 PF00072 Response regulator receiver domain IC774_00950 PF00672 HAMP domain IC774_00950 PF00072 Response regulator receiver domain IC774_00950 PF00512 His Kinase A (phospho-acceptor) domain IC774_00950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_00950 PF01627 Hpt domain IC774_00955 PF04341 Protein of unknown function, DUF485 IC774_00970 PF02028 BCCT, betaine/carnitine/choline family transporter IC774_00980 PF00990 Diguanylate cyclase, GGDEF domain IC774_00990 PF16925 Tetracyclin repressor-like, C-terminal domain IC774_00990 PF00440 Bacterial regulatory proteins, tetR family IC774_00995 PF00107 Zinc-binding dehydrogenase IC774_00995 PF08240 Alcohol dehydrogenase GroES-like domain IC774_01005 PF06942 GlpM protein IC774_01010 PF00106 short chain dehydrogenase IC774_01015 PF00376 MerR family regulatory protein IC774_01015 PF09278 MerR, DNA binding IC774_01020 PF08543 Phosphomethylpyrimidine kinase IC774_01020 PF03070 TENA/THI-4/PQQC family IC774_01020 PF02581 Thiamine monophosphate synthase IC774_01030 PF07690 Major Facilitator Superfamily IC774_01035 PF00436 Single-strand binding protein family IC774_01065 PF01425 Amidase IC774_01100 PF00239 Resolvase, N terminal domain IC774_01100 PF02796 Helix-turn-helix domain of resolvase IC774_01110 PF03591 AzlC protein IC774_01120 PF00324 Amino acid permease IC774_01130 PF00202 Aminotransferase class-III IC774_01135 PF00171 Aldehyde dehydrogenase family IC774_01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_01145 PF00857 Isochorismatase family IC774_01150 PF05726 Pirin C-terminal cupin domain IC774_01150 PF02678 Pirin IC774_01155 PF01593 Flavin containing amine oxidoreductase IC774_01180 PF07690 Major Facilitator Superfamily IC774_01185 PF03466 LysR substrate binding domain IC774_01185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_01205 PF00248 Aldo/keto reductase family IC774_01210 PF02311 AraC-like ligand binding domain IC774_01210 PF12833 Helix-turn-helix domain IC774_01225 PF01638 HxlR-like helix-turn-helix IC774_01235 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IC774_01255 PF01638 HxlR-like helix-turn-helix IC774_01260 PF02525 Flavodoxin-like fold IC774_01280 PF02705 K+ potassium transporter IC774_01320 PF00977 Histidine biosynthesis protein IC774_01325 PF01636 Phosphotransferase enzyme family IC774_01355 PF00977 Histidine biosynthesis protein IC774_01370 PF00117 Glutamine amidotransferase class-I IC774_01375 PF00475 Imidazoleglycerol-phosphate dehydratase IC774_01395 PF00583 Acetyltransferase (GNAT) family IC774_01400 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IC774_01400 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IC774_01410 PF00672 HAMP domain IC774_01410 PF00512 His Kinase A (phospho-acceptor) domain IC774_01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_01415 PF00072 Response regulator receiver domain IC774_01415 PF00486 Transcriptional regulatory protein, C terminal IC774_01420 PF16921 Tex protein YqgF-like domain IC774_01420 PF09371 Tex-like protein N-terminal domain IC774_01420 PF17674 HHH domain IC774_01420 PF00575 S1 RNA binding domain IC774_01435 PF00106 short chain dehydrogenase IC774_01440 PF01053 Cys/Met metabolism PLP-dependent enzyme IC774_01445 PF00205 Thiamine pyrophosphate enzyme, central domain IC774_01445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC774_01445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC774_01450 PF00005 ABC transporter IC774_01450 PF12848 ABC transporter IC774_01480 PF00529 HlyD membrane-fusion protein of T1SS IC774_01480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC774_01485 PF00873 AcrB/AcrD/AcrF family IC774_01490 PF01545 Cation efflux family IC774_01520 PF00324 Amino acid permease IC774_01535 PF00749 tRNA synthetases class I (E and Q), catalytic domain IC774_01550 PF01795 MraW methylase family IC774_01565 PF02875 Mur ligase family, glutamate ligase domain IC774_01565 PF01225 Mur ligase family, catalytic domain IC774_01565 PF08245 Mur ligase middle domain IC774_01570 PF01225 Mur ligase family, catalytic domain IC774_01570 PF02875 Mur ligase family, glutamate ligase domain IC774_01570 PF08245 Mur ligase middle domain IC774_01575 PF00953 Glycosyl transferase family 4 IC774_01585 PF13847 Methyltransferase domain IC774_01595 PF11104 Type IV pilus assembly protein PilM; IC774_01600 PF05137 Fimbrial assembly protein (PilN) IC774_01605 PF04350 Pilus assembly protein, PilO IC774_01615 PF11741 AMIN domain IC774_01615 PF03958 Bacterial type II/III secretion system short domain IC774_01615 PF07660 Secretin and TonB N terminus short domain IC774_01615 PF00263 Bacterial type II and III secretion system protein IC774_01620 PF01202 Shikimate kinase IC774_01625 PF01761 3-dehydroquinate synthase IC774_01635 PF01493 GXGXG motif IC774_01635 PF01645 Conserved region in glutamate synthase IC774_01635 PF04898 Glutamate synthase central domain IC774_01635 PF00310 Glutamine amidotransferases class-II IC774_01640 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_01640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IC774_01650 PF04011 LemA family IC774_01655 PF04536 TPM domain IC774_01665 PF00114 Pilin (bacterial filament) IC774_01665 PF07963 Prokaryotic N-terminal methylation motif IC774_01675 PF11846 Virulence factor membrane-bound polymerase, C-terminal IC774_01675 PF15864 Protein glycosylation ligase IC774_01675 PF04932 O-Antigen ligase IC774_01680 PF00210 Ferritin-like domain IC774_01685 PF04324 BFD-like [2Fe-2S] binding domain IC774_01690 PF01042 Endoribonuclease L-PSP IC774_01695 PF13291 ACT domain IC774_01695 PF02824 TGS domain IC774_01695 PF04607 Region found in RelA / SpoT proteins IC774_01705 PF01192 RNA polymerase Rpb6 IC774_01710 PF00625 Guanylate kinase IC774_01715 PF02401 LytB protein IC774_01725 PF07963 Prokaryotic N-terminal methylation motif IC774_01725 PF00114 Pilin (bacterial filament) IC774_01750 PF00114 Pilin (bacterial filament) IC774_01750 PF07963 Prokaryotic N-terminal methylation motif IC774_01755 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor IC774_01755 PF07963 Prokaryotic N-terminal methylation motif IC774_01760 PF00886 Ribosomal protein S16 IC774_01765 PF05239 PRC-barrel domain IC774_01765 PF01782 RimM N-terminal domain IC774_01770 PF01746 tRNA (Guanine-1)-methyltransferase IC774_01775 PF01245 Ribosomal protein L19 IC774_01780 PF00561 alpha/beta hydrolase fold IC774_01785 PF03280 Proteobacterial lipase chaperone protein IC774_01790 PF01509 TruB family pseudouridylate synthase (N terminal domain) IC774_01790 PF16198 tRNA pseudouridylate synthase B C-terminal domain IC774_01790 PF09157 Pseudouridine synthase II TruB, C-terminal IC774_01795 PF01925 Sulfite exporter TauE/SafE IC774_01805 PF00892 EamA-like transporter family IC774_01810 PF00892 EamA-like transporter family IC774_01815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IC774_01815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IC774_01820 PF01565 FAD binding domain IC774_01820 PF02913 FAD linked oxidases, C-terminal domain IC774_01830 PF03992 Antibiotic biosynthesis monooxygenase IC774_01835 PF02525 Flavodoxin-like fold IC774_01845 PF07690 Major Facilitator Superfamily IC774_01850 PF12805 FUSC-like inner membrane protein yccS IC774_01855 PF00080 Copper/zinc superoxide dismutase (SODC) IC774_01860 PF01594 AI-2E family transporter IC774_01865 PF13614 AAA domain IC774_01895 PF00324 Amino acid permease IC774_01900 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IC774_01900 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IC774_01905 PF00202 Aminotransferase class-III IC774_01910 PF04958 Arginine N-succinyltransferase beta subunit IC774_01915 PF00171 Aldehyde dehydrogenase family IC774_01920 PF04996 Succinylarginine dihydrolase IC774_01940 PF05922 Peptidase inhibitor I9 IC774_01940 PF00082 Subtilase family IC774_01955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_01955 PF03466 LysR substrate binding domain IC774_01960 PF01177 Asp/Glu/Hydantoin racemase IC774_01965 PF03466 LysR substrate binding domain IC774_01965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_01970 PF00892 EamA-like transporter family IC774_01980 PF05746 DALR anticodon binding domain IC774_01980 PF02092 Glycyl-tRNA synthetase beta subunit IC774_01985 PF02091 Glycyl-tRNA synthetase alpha subunit IC774_02010 PF01743 Poly A polymerase head domain IC774_02010 PF00571 CBS domain IC774_02015 PF04024 PspC domain IC774_02025 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_02025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_02025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_02025 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC774_02035 PF01488 Shikimate / quinate 5-dehydrogenase IC774_02035 PF08501 Shikimate dehydrogenase substrate binding domain IC774_02035 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IC774_02040 PF01218 Coproporphyrinogen III oxidase IC774_02045 PF00925 GTP cyclohydrolase II IC774_02050 PF02780 Transketolase, C-terminal domain IC774_02050 PF02779 Transketolase, pyrimidine binding domain IC774_02050 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IC774_02055 PF00459 Inositol monophosphatase family IC774_02060 PF00270 DEAD/DEAH box helicase IC774_02060 PF00271 Helicase conserved C-terminal domain IC774_02065 PF00005 ABC transporter IC774_02070 PF02405 Permease MlaE IC774_02080 PF05494 MlaC protein IC774_02090 PF01544 CorA-like Mg2+ transporter protein IC774_02095 PF03641 Possible lysine decarboxylase IC774_02100 PF00293 NUDIX domain IC774_02105 PF00156 Phosphoribosyl transferase domain IC774_02110 PF00270 DEAD/DEAH box helicase IC774_02110 PF17191 RecG wedge domain IC774_02110 PF00271 Helicase conserved C-terminal domain IC774_02135 PF00375 Sodium:dicarboxylate symporter family IC774_02145 PF01926 50S ribosome-binding GTPase IC774_02150 PF02082 Transcriptional regulator IC774_02155 PF00970 Oxidoreductase FAD-binding domain IC774_02155 PF00175 Oxidoreductase NAD-binding domain IC774_02155 PF00042 Globin IC774_02160 PF05872 Bacterial protein of unknown function (DUF853) IC774_02165 PF01053 Cys/Met metabolism PLP-dependent enzyme IC774_02170 PF00117 Glutamine amidotransferase class-I IC774_02175 PF00338 Ribosomal protein S10p/S20e IC774_02180 PF00297 Ribosomal protein L3 IC774_02185 PF00573 Ribosomal protein L4/L1 family IC774_02190 PF00276 Ribosomal protein L23 IC774_02195 PF03947 Ribosomal Proteins L2, C-terminal domain IC774_02195 PF00181 Ribosomal Proteins L2, RNA binding domain IC774_02200 PF00203 Ribosomal protein S19 IC774_02205 PF00237 Ribosomal protein L22p/L17e IC774_02210 PF00189 Ribosomal protein S3, C-terminal domain IC774_02210 PF07650 KH domain IC774_02215 PF00252 Ribosomal protein L16p/L10e IC774_02220 PF00831 Ribosomal L29 protein IC774_02225 PF00366 Ribosomal protein S17 IC774_02230 PF00238 Ribosomal protein L14p/L23e IC774_02235 PF00467 KOW motif IC774_02235 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IC774_02240 PF00281 Ribosomal protein L5 IC774_02240 PF00673 ribosomal L5P family C-terminus IC774_02245 PF00253 Ribosomal protein S14p/S29e IC774_02250 PF00410 Ribosomal protein S8 IC774_02255 PF00347 Ribosomal protein L6 IC774_02260 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IC774_02265 PF00333 Ribosomal protein S5, N-terminal domain IC774_02265 PF03719 Ribosomal protein S5, C-terminal domain IC774_02270 PF00327 Ribosomal protein L30p/L7e IC774_02275 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IC774_02285 PF00444 Ribosomal protein L36 IC774_02290 PF00416 Ribosomal protein S13/S18 IC774_02295 PF00411 Ribosomal protein S11 IC774_02300 PF01479 S4 domain IC774_02300 PF00163 Ribosomal protein S4/S9 N-terminal domain IC774_02305 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IC774_02305 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IC774_02305 PF01000 RNA polymerase Rpb3/RpoA insert domain IC774_02310 PF01196 Ribosomal protein L17 IC774_02315 PF00743 Flavin-binding monooxygenase-like IC774_02320 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_02320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_02320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_02325 PF03937 Flavinator of succinate dehydrogenase IC774_02355 PF09526 Probable metal-binding protein (DUF2387) IC774_02360 PF01432 Peptidase family M3 IC774_02410 PF01557 Fumarylacetoacetate (FAA) hydrolase family IC774_02415 PF12833 Helix-turn-helix domain IC774_02425 PF03631 Virulence factor BrkB IC774_02430 PF03358 NADPH-dependent FMN reductase IC774_02455 PF02130 Uncharacterized protein family UPF0054 IC774_02460 PF02562 PhoH-like protein IC774_02465 PF00919 Uncharacterized protein family UPF0004 IC774_02465 PF01938 TRAM domain IC774_02465 PF04055 Radical SAM superfamily IC774_02470 PF01551 Peptidase family M23 IC774_02470 PF01464 Transglycosylase SLT domain IC774_02470 PF10145 Phage-related minor tail protein IC774_02480 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IC774_02480 PF00056 lactate/malate dehydrogenase, NAD binding domain IC774_02500 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IC774_02505 PF01066 CDP-alcohol phosphatidyltransferase IC774_02570 PF13302 Acetyltransferase (GNAT) domain IC774_02575 PF17932 Tetracyclin repressor-like, C-terminal domain IC774_02575 PF00440 Bacterial regulatory proteins, tetR family IC774_02590 PF01039 Carboxyl transferase domain IC774_02595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_02595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_02595 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_02600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC774_02600 PF00378 Enoyl-CoA hydratase/isomerase IC774_02600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC774_02605 PF02785 Biotin carboxylase C-terminal domain IC774_02605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC774_02605 PF00364 Biotin-requiring enzyme IC774_02605 PF00289 Biotin carboxylase, N-terminal domain IC774_02635 PF04386 Stringent starvation protein B IC774_02640 PF00043 Glutathione S-transferase, C-terminal domain IC774_02640 PF13417 Glutathione S-transferase, N-terminal domain IC774_02645 PF00380 Ribosomal protein S9/S16 IC774_02650 PF00572 Ribosomal protein L13 IC774_02655 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IC774_02660 PF00398 Ribosomal RNA adenine dimethylase IC774_02665 PF00149 Calcineurin-like phosphoesterase IC774_02685 PF16360 GTP-binding GTPase Middle Region IC774_02685 PF01926 50S ribosome-binding GTPase IC774_02685 PF13167 GTP-binding GTPase N-terminal IC774_02695 PF13091 PLD-like domain IC774_02700 PF10518 TAT (twin-arginine translocation) pathway signal sequence IC774_02700 PF00149 Calcineurin-like phosphoesterase IC774_02705 PF01389 OmpA-like transmembrane domain IC774_02705 PF00691 OmpA family IC774_02710 PF17152 Periplasmic sensor domain IC774_02710 PF00990 Diguanylate cyclase, GGDEF domain IC774_02745 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_02745 PF00403 Heavy-metal-associated domain IC774_02745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC774_02755 PF00753 Metallo-beta-lactamase superfamily IC774_02755 PF04273 Putative phosphatase (DUF442) IC774_02760 PF00561 alpha/beta hydrolase fold IC774_02765 PF00085 Thioredoxin IC774_02770 PF03061 Thioesterase superfamily IC774_02785 PF04461 Protein of unknown function (DUF520) IC774_02795 PF01266 FAD dependent oxidoreductase IC774_02795 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IC774_02805 PF03795 YCII-related domain IC774_02810 PF04279 Intracellular septation protein A IC774_02815 PF02811 PHP domain IC774_02820 PF01062 Bestrophin, RFP-TM, chloride channel IC774_02825 PF04002 RadC-like JAB domain IC774_02830 PF04127 DNA / pantothenate metabolism flavoprotein IC774_02830 PF02441 Flavoprotein IC774_02835 PF02355 Protein export membrane protein IC774_02835 PF07549 SecD/SecF GG Motif IC774_02840 PF07549 SecD/SecF GG Motif IC774_02840 PF13721 SecD export protein N-terminal TM region IC774_02840 PF02355 Protein export membrane protein IC774_02845 PF02699 Preprotein translocase subunit IC774_02850 PF01702 Queuine tRNA-ribosyltransferase IC774_02865 PF02547 Queuosine biosynthesis protein IC774_02880 PF02463 RecF/RecN/SMC N terminal domain IC774_02885 PF00072 Response regulator receiver domain IC774_02885 PF00512 His Kinase A (phospho-acceptor) domain IC774_02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_02885 PF09308 LuxQ, periplasmic IC774_02895 PF01063 Amino-transferase class IV IC774_02905 PF00884 Sulfatase IC774_02915 PF01522 Polysaccharide deacetylase IC774_02920 PF00535 Glycosyl transferase family 2 IC774_02925 PF00534 Glycosyl transferases group 1 IC774_02925 PF13439 Glycosyltransferase Family 4 IC774_02960 PF17103 Stealth protein CR4, conserved region 4 IC774_02960 PF11380 Stealth protein CR2, conserved region 2 IC774_02960 PF17101 Stealth protein CR1, conserved region 1 IC774_02965 PF01336 OB-fold nucleic acid binding domain IC774_02965 PF00152 tRNA synthetases class II (D, K and N) IC774_02965 PF02938 GAD domain IC774_02975 PF07715 TonB-dependent Receptor Plug Domain IC774_02975 PF00593 TonB dependent receptor IC774_02995 PF06146 Phosphate-starvation-inducible E IC774_03000 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC774_03000 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_03000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_03000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_03005 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC774_03005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_03005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_03005 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_03015 PF00512 His Kinase A (phospho-acceptor) domain IC774_03015 PF00672 HAMP domain IC774_03020 PF00072 Response regulator receiver domain IC774_03020 PF00486 Transcriptional regulatory protein, C terminal IC774_03030 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IC774_03050 PF01923 Cobalamin adenosyltransferase IC774_03055 PF00593 TonB dependent receptor IC774_03055 PF07715 TonB-dependent Receptor Plug Domain IC774_03060 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IC774_03065 PF00291 Pyridoxal-phosphate dependent enzyme IC774_03095 PF00290 Tryptophan synthase alpha chain IC774_03100 PF01039 Carboxyl transferase domain IC774_03120 PF00753 Metallo-beta-lactamase superfamily IC774_03125 PF10417 C-terminal domain of 1-Cys peroxiredoxin IC774_03125 PF00578 AhpC/TSA family IC774_03130 PF07516 SecA Wing and Scaffold domain IC774_03130 PF01043 SecA preprotein cross-linking domain IC774_03130 PF07517 SecA DEAD-like domain IC774_03130 PF02810 SEC-C motif IC774_03140 PF07690 Major Facilitator Superfamily IC774_03140 PF00083 Sugar (and other) transporter IC774_03145 PF03006 Haemolysin-III related IC774_03155 PF13673 Acetyltransferase (GNAT) domain IC774_03170 PF00378 Enoyl-CoA hydratase/isomerase IC774_03170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC774_03170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC774_03175 PF00108 Thiolase, N-terminal domain IC774_03175 PF02803 Thiolase, C-terminal domain IC774_03180 PF02311 AraC-like ligand binding domain IC774_03180 PF12833 Helix-turn-helix domain IC774_03185 PF02515 CoA-transferase family III IC774_03190 PF04966 Carbohydrate-selective porin, OprB family IC774_03195 PF01011 PQQ enzyme repeat IC774_03200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IC774_03200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IC774_03220 PF07963 Prokaryotic N-terminal methylation motif IC774_03220 PF00114 Pilin (bacterial filament) IC774_03225 PF13505 Outer membrane protein beta-barrel domain IC774_03225 PF00691 OmpA family IC774_03235 PF01139 tRNA-splicing ligase RtcB IC774_03240 PF00324 Amino acid permease IC774_03250 PF00860 Permease family IC774_03255 PF00009 Elongation factor Tu GTP binding domain IC774_03255 PF03144 Elongation factor Tu domain 2 IC774_03255 PF00679 Elongation factor G C-terminus IC774_03260 PF01741 Large-conductance mechanosensitive channel, MscL IC774_03275 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IC774_03275 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IC774_03275 PF06827 Zinc finger found in FPG and IleRS IC774_03280 PF02245 Methylpurine-DNA glycosylase (MPG) IC774_03285 PF07715 TonB-dependent Receptor Plug Domain IC774_03285 PF00593 TonB dependent receptor IC774_03290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC774_03295 PF03547 Membrane transport protein IC774_03305 PF13098 Thioredoxin-like domain IC774_03305 PF10411 Disulfide bond isomerase protein N-terminus IC774_03310 PF01571 Aminomethyltransferase folate-binding domain IC774_03330 PF01613 Flavin reductase like domain IC774_03335 PF01042 Endoribonuclease L-PSP IC774_03340 PF00857 Isochorismatase family IC774_03345 PF00296 Luciferase-like monooxygenase IC774_03350 PF00881 Nitroreductase family IC774_03355 PF12697 Alpha/beta hydrolase family IC774_03360 PF04343 Protein of unknown function, DUF488 IC774_03365 PF08274 PhnA Zinc-Ribbon IC774_03365 PF03831 PhnA domain IC774_03370 PF07411 Domain of unknown function (DUF1508) IC774_03375 PF03129 Anticodon binding domain IC774_03375 PF04073 Aminoacyl-tRNA editing domain IC774_03375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC774_03380 PF00873 AcrB/AcrD/AcrF family IC774_03395 PF00072 Response regulator receiver domain IC774_03400 PF00072 Response regulator receiver domain IC774_03405 PF01584 CheW-like domain IC774_03410 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IC774_03410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IC774_03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_03415 PF01584 CheW-like domain IC774_03415 PF01627 Hpt domain IC774_03415 PF00072 Response regulator receiver domain IC774_03425 PF06969 HemN C-terminal domain IC774_03425 PF04055 Radical SAM superfamily IC774_03435 PF01546 Peptidase family M20/M25/M40 IC774_03435 PF07687 Peptidase dimerisation domain IC774_03450 PF04304 Protein of unknown function (DUF454) IC774_03455 PF17969 L,D-transpeptidase C-terminal domain IC774_03455 PF03734 L,D-transpeptidase catalytic domain IC774_03495 PF00175 Oxidoreductase NAD-binding domain IC774_03495 PF00258 Flavodoxin IC774_03495 PF00667 FAD binding domain IC774_03505 PF12805 FUSC-like inner membrane protein yccS IC774_03510 PF07690 Major Facilitator Superfamily IC774_03515 PF00881 Nitroreductase family IC774_03530 PF01235 Sodium:alanine symporter family IC774_03535 PF01734 Patatin-like phospholipase IC774_03540 PF00291 Pyridoxal-phosphate dependent enzyme IC774_03540 PF13291 ACT domain IC774_03545 PF05992 SbmA/BacA-like family IC774_03575 PF02637 GatB domain IC774_03575 PF02934 GatB/GatE catalytic domain IC774_03580 PF01425 Amidase IC774_03585 PF02686 Glu-tRNAGln amidotransferase C subunit IC774_03595 PF04085 rod shape-determining protein MreC IC774_03600 PF04093 rod shape-determining protein MreD IC774_03605 PF02545 Maf-like protein IC774_03610 PF10150 Ribonuclease E/G family IC774_03610 PF00575 S1 RNA binding domain IC774_03620 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IC774_03620 PF06974 Protein of unknown function (DUF1298) IC774_03625 PF01507 Phosphoadenosine phosphosulfate reductase family IC774_03640 PF02525 Flavodoxin-like fold IC774_03660 PF02673 Bacitracin resistance protein BacA IC774_03665 PF06719 AraC-type transcriptional regulator N-terminus IC774_03665 PF12833 Helix-turn-helix domain IC774_03670 PF14765 Polyketide synthase dehydratase IC774_03670 PF02801 Beta-ketoacyl synthase, C-terminal domain IC774_03670 PF08240 Alcohol dehydrogenase GroES-like domain IC774_03670 PF00550 Phosphopantetheine attachment site IC774_03670 PF08659 KR domain IC774_03670 PF00109 Beta-ketoacyl synthase, N-terminal domain IC774_03670 PF16197 Ketoacyl-synthetase C-terminal extension IC774_03670 PF09277 Erythronolide synthase, docking IC774_03670 PF08990 Erythronolide synthase docking IC774_03670 PF00698 Acyl transferase domain IC774_03675 PF01965 DJ-1/PfpI family IC774_03695 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IC774_03700 PF09297 NADH pyrophosphatase zinc ribbon domain IC774_03700 PF00293 NUDIX domain IC774_03705 PF00324 Amino acid permease IC774_03710 PF04303 PrpF protein IC774_03715 PF00348 Polyprenyl synthetase IC774_03720 PF04237 YjbR IC774_03725 PF01145 SPFH domain / Band 7 family IC774_03735 PF01734 Patatin-like phospholipase IC774_03760 PF00072 Response regulator receiver domain IC774_03760 PF00486 Transcriptional regulatory protein, C terminal IC774_03765 PF00512 His Kinase A (phospho-acceptor) domain IC774_03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_03765 PF08521 Two-component sensor kinase N-terminal IC774_03780 PF03466 LysR substrate binding domain IC774_03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_03805 PF10458 Valyl tRNA synthetase tRNA binding arm IC774_03805 PF00133 tRNA synthetases class I (I, L, M and V) IC774_03805 PF08264 Anticodon-binding domain of tRNA IC774_03815 PF08264 Anticodon-binding domain of tRNA IC774_03815 PF10458 Valyl tRNA synthetase tRNA binding arm IC774_03815 PF00133 tRNA synthetases class I (I, L, M and V) IC774_03835 PF01906 Putative heavy-metal-binding IC774_03840 PF01906 Putative heavy-metal-binding IC774_03845 PF02321 Outer membrane efflux protein IC774_03850 PF00873 AcrB/AcrD/AcrF family IC774_03855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC774_03855 PF00529 HlyD membrane-fusion protein of T1SS IC774_03860 PF01569 PAP2 superfamily IC774_03870 PF00348 Polyprenyl synthetase IC774_03880 PF00829 Ribosomal prokaryotic L21 protein IC774_03885 PF01016 Ribosomal L27 protein IC774_03890 PF03548 Outer membrane lipoprotein carrier protein LolA IC774_03900 PF02403 Seryl-tRNA synthetase N-terminal domain IC774_03900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC774_03905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IC774_03905 PF14824 Sirohaem biosynthesis protein central IC774_03905 PF10414 Sirohaem synthase dimerisation region IC774_03910 PF00588 SpoU rRNA Methylase family IC774_03915 PF01638 HxlR-like helix-turn-helix IC774_03920 PF03358 NADPH-dependent FMN reductase IC774_03925 PF13520 Amino acid permease IC774_03930 PF00465 Iron-containing alcohol dehydrogenase IC774_03940 PF03099 Biotin/lipoate A/B protein ligase family IC774_03945 PF04359 Protein of unknown function (DUF493) IC774_03950 PF04545 Sigma-70, region 4 IC774_03950 PF03979 Sigma-70 factor, region 1.1 IC774_03950 PF04542 Sigma-70 region 2 IC774_03950 PF04539 Sigma-70 region 3 IC774_03950 PF00140 Sigma-70 factor, region 1.2 IC774_03950 PF04546 Sigma-70, non-essential region IC774_03965 PF17773 UPF0176 acylphosphatase like domain IC774_03965 PF00581 Rhodanese-like domain IC774_03975 PF00285 Citrate synthase, C-terminal domain IC774_03980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IC774_03985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IC774_03990 PF00890 FAD binding domain IC774_03990 PF02910 Fumarate reductase flavoprotein C-term IC774_03995 PF13085 2Fe-2S iron-sulfur cluster binding domain IC774_04010 PF02779 Transketolase, pyrimidine binding domain IC774_04010 PF16078 2-oxoglutarate dehydrogenase N-terminus IC774_04010 PF16870 2-oxoglutarate dehydrogenase C-terminal IC774_04010 PF00676 Dehydrogenase E1 component IC774_04015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC774_04015 PF00364 Biotin-requiring enzyme IC774_04015 PF02817 e3 binding domain IC774_04020 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_04020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC774_04025 PF00549 CoA-ligase IC774_04025 PF08442 ATP-grasp domain IC774_04030 PF02629 CoA binding domain IC774_04030 PF00549 CoA-ligase IC774_04035 PF00579 tRNA synthetases class I (W and Y) IC774_04040 PF05661 Protein of unknown function (DUF808) IC774_04045 PF04228 Putative neutral zinc metallopeptidase IC774_04050 PF00999 Sodium/hydrogen exchanger family IC774_04065 PF00582 Universal stress protein family IC774_04070 PF00132 Bacterial transferase hexapeptide (six repeats) IC774_04075 PF01272 Transcription elongation factor, GreA/GreB, C-term IC774_04075 PF03449 Transcription elongation factor, N-terminal IC774_04080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC774_04080 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IC774_04080 PF02142 MGS-like domain IC774_04085 PF00117 Glutamine amidotransferase class-I IC774_04085 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IC774_04100 PF01985 CRS1 / YhbY (CRM) domain IC774_04110 PF06480 FtsH Extracellular IC774_04110 PF17862 AAA+ lid domain IC774_04110 PF00004 ATPase family associated with various cellular activities (AAA) IC774_04110 PF01434 Peptidase family M41 IC774_04115 PF00809 Pterin binding enzyme IC774_04135 PF09423 PhoD-like phosphatase IC774_04135 PF16655 PhoD-like phosphatase, N-terminal domain IC774_04150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IC774_04150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IC774_04165 PF00083 Sugar (and other) transporter IC774_04170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IC774_04170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IC774_04175 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IC774_04175 PF01266 FAD dependent oxidoreductase IC774_04180 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain IC774_04180 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain IC774_04185 PF00781 Diacylglycerol kinase catalytic domain IC774_04190 PF00149 Calcineurin-like phosphoesterase IC774_04195 PF00166 Chaperonin 10 Kd subunit IC774_04200 PF00118 TCP-1/cpn60 chaperonin family IC774_04205 PF01219 Prokaryotic diacylglycerol kinase IC774_04210 PF00753 Metallo-beta-lactamase superfamily IC774_04215 PF03009 Glycerophosphoryl diester phosphodiesterase family IC774_04220 PF00873 AcrB/AcrD/AcrF family IC774_04230 PF01435 Peptidase family M48 IC774_04235 PF01464 Transglycosylase SLT domain IC774_04240 PF01171 PP-loop family IC774_04250 PF01464 Transglycosylase SLT domain IC774_04250 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC774_04255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IC774_04255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IC774_04260 PF03449 Transcription elongation factor, N-terminal IC774_04260 PF01272 Transcription elongation factor, GreA/GreB, C-term IC774_04325 PF00743 Flavin-binding monooxygenase-like IC774_04335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_04335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_04335 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_04340 PF00378 Enoyl-CoA hydratase/isomerase IC774_04345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC774_04345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC774_04345 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IC774_04350 PF02803 Thiolase, C-terminal domain IC774_04350 PF00108 Thiolase, N-terminal domain IC774_04355 PF02515 CoA-transferase family III IC774_04360 PF09339 IclR helix-turn-helix domain IC774_04375 PF13533 Biotin-lipoyl like IC774_04380 PF00873 AcrB/AcrD/AcrF family IC774_04385 PF00873 AcrB/AcrD/AcrF family IC774_04390 PF02321 Outer membrane efflux protein IC774_04395 PF00975 Thioesterase domain IC774_04395 PF00550 Phosphopantetheine attachment site IC774_04395 PF00668 Condensation domain IC774_04395 PF13193 AMP-binding enzyme C-terminal domain IC774_04395 PF00501 AMP-binding enzyme IC774_04415 PF09857 Putative toxin of bacterial toxin-antitoxin pair IC774_04480 PF00440 Bacterial regulatory proteins, tetR family IC774_04485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC774_04490 PF00364 Biotin-requiring enzyme IC774_04490 PF00561 alpha/beta hydrolase fold IC774_04495 PF00364 Biotin-requiring enzyme IC774_04495 PF00561 alpha/beta hydrolase fold IC774_04500 PF00561 alpha/beta hydrolase fold IC774_04510 PF03466 LysR substrate binding domain IC774_04510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_04515 PF05199 GMC oxidoreductase IC774_04515 PF00732 GMC oxidoreductase IC774_04520 PF00171 Aldehyde dehydrogenase family IC774_04540 PF00529 HlyD membrane-fusion protein of T1SS IC774_04540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC774_04545 PF00873 AcrB/AcrD/AcrF family IC774_04550 PF00881 Nitroreductase family IC774_04565 PF02595 Glycerate kinase family IC774_04570 PF00384 Molybdopterin oxidoreductase IC774_04575 PF02634 FdhD/NarQ family IC774_04580 PF06803 Protein of unknown function (DUF1232) IC774_04590 PF00152 tRNA synthetases class II (D, K and N) IC774_04600 PF18073 Rubredoxin metal binding domain IC774_04605 PF01235 Sodium:alanine symporter family IC774_04610 PF00324 Amino acid permease IC774_04620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IC774_04620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IC774_04625 PF01678 Diaminopimelate epimerase IC774_04635 PF01810 LysE type translocator IC774_04645 PF01012 Electron transfer flavoprotein domain IC774_04650 PF00766 Electron transfer flavoprotein FAD-binding domain IC774_04650 PF01012 Electron transfer flavoprotein domain IC774_04660 PF16123 Hydroxyacylglutathione hydrolase C-terminus IC774_04660 PF00753 Metallo-beta-lactamase superfamily IC774_04665 PF00521 DNA gyrase/topoisomerase IV, subunit A IC774_04665 PF03989 DNA gyrase C-terminal domain, beta-propeller IC774_04670 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IC774_04680 PF00535 Glycosyl transferase family 2 IC774_04700 PF13533 Biotin-lipoyl like IC774_04710 PF00266 Aminotransferase class-V IC774_04725 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IC774_04735 PF02687 FtsX-like permease family IC774_04735 PF12704 MacB-like periplasmic core domain IC774_04740 PF00005 ABC transporter IC774_04755 PF01343 Peptidase family S49 IC774_04755 PF06965 Na+/H+ antiporter 1 IC774_04760 PF12697 Alpha/beta hydrolase family IC774_04765 PF00551 Formyl transferase IC774_04770 PF02769 AIR synthase related protein, C-terminal domain IC774_04770 PF00586 AIR synthase related protein, N-terminal domain IC774_04775 PF01594 AI-2E family transporter IC774_04780 PF00308 Bacterial dnaA protein IC774_04780 PF11638 DnaA N-terminal domain IC774_04780 PF08299 Bacterial dnaA protein helix-turn-helix IC774_04810 PF08032 RNA 2'-O ribose methyltransferase substrate binding IC774_04810 PF00588 SpoU rRNA Methylase family IC774_04815 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IC774_04825 PF00691 OmpA family IC774_04830 PF07676 WD40-like Beta Propeller Repeat IC774_04830 PF04052 TolB amino-terminal domain IC774_04840 PF02472 Biopolymer transport protein ExbD/TolR IC774_04845 PF01618 MotA/TolQ/ExbB proton channel family IC774_04850 PF03061 Thioesterase superfamily IC774_04855 PF07687 Peptidase dimerisation domain IC774_04855 PF01546 Peptidase family M20/M25/M40 IC774_04860 PF05496 Holliday junction DNA helicase RuvB P-loop domain IC774_04860 PF05491 RuvB C-terminal winged helix domain IC774_04860 PF17864 RuvB AAA lid domain IC774_04865 PF01330 RuvA N terminal domain IC774_04865 PF07499 RuvA, C-terminal domain IC774_04885 PF07690 Major Facilitator Superfamily IC774_04900 PF01784 NIF3 (NGG1p interacting factor 3) IC774_04905 PF00378 Enoyl-CoA hydratase/isomerase IC774_04910 PF00293 NUDIX domain IC774_04910 PF01467 Cytidylyltransferase-like IC774_04925 PF00578 AhpC/TSA family IC774_04930 PF06508 Queuosine biosynthesis protein QueC IC774_04940 PF06508 Queuosine biosynthesis protein QueC IC774_04945 PF04055 Radical SAM superfamily IC774_04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_04960 PF03466 LysR substrate binding domain IC774_04965 PF12857 TOBE-like domain IC774_04965 PF00005 ABC transporter IC774_04970 PF00528 Binding-protein-dependent transport system inner membrane component IC774_04975 PF00528 Binding-protein-dependent transport system inner membrane component IC774_04995 PF02618 YceG-like family IC774_05000 PF02223 Thymidylate kinase IC774_05010 PF02910 Fumarate reductase flavoprotein C-term IC774_05010 PF00890 FAD binding domain IC774_05015 PF13180 PDZ domain IC774_05030 PF10502 Signal peptidase, peptidase S26 IC774_05040 PF00035 Double-stranded RNA binding motif IC774_05040 PF14622 Ribonuclease-III-like IC774_05045 PF01926 50S ribosome-binding GTPase IC774_05045 PF07650 KH domain IC774_05055 PF02565 Recombination protein O C terminal IC774_05055 PF11967 Recombination protein O N terminal IC774_05060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IC774_05065 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IC774_05105 PF00990 Diguanylate cyclase, GGDEF domain IC774_05105 PF17151 Periplasmic sensor domain IC774_05115 PF00990 Diguanylate cyclase, GGDEF domain IC774_05120 PF17757 UvrB interaction domain IC774_05120 PF00271 Helicase conserved C-terminal domain IC774_05120 PF04851 Type III restriction enzyme, res subunit IC774_05120 PF02151 UvrB/uvrC motif IC774_05120 PF12344 Ultra-violet resistance protein B IC774_05135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IC774_05135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IC774_05150 PF01018 GTP1/OBG IC774_05150 PF01926 50S ribosome-binding GTPase IC774_05155 PF00696 Amino acid kinase family IC774_05155 PF01472 PUA domain IC774_05165 PF07759 Protein of unknown function (DUF1615) IC774_05175 PF03060 Nitronate monooxygenase IC774_05190 PF02350 UDP-N-acetylglucosamine 2-epimerase IC774_05220 PF03441 FAD binding domain of DNA photolyase IC774_05220 PF00875 DNA photolyase IC774_05225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC774_05230 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_05245 PF03971 Monomeric isocitrate dehydrogenase IC774_05250 PF00849 RNA pseudouridylate synthase IC774_05255 PF00180 Isocitrate/isopropylmalate dehydrogenase IC774_05350 PF00772 DnaB-like helicase N terminal domain IC774_05350 PF03796 DnaB-like helicase C terminal domain IC774_05390 PF00149 Calcineurin-like phosphoesterase IC774_05440 PF10668 Phage terminase small subunit IC774_05440 PF03592 Terminase small subunit IC774_05530 PF00665 Integrase core domain IC774_05530 PF13936 Helix-turn-helix domain IC774_05555 PF10145 Phage-related minor tail protein IC774_05555 PF01464 Transglycosylase SLT domain IC774_05555 PF01551 Peptidase family M23 IC774_05625 PF06779 Uncharacterised MFS-type transporter YbfB IC774_05630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_05630 PF03466 LysR substrate binding domain IC774_05635 PF00375 Sodium:dicarboxylate symporter family IC774_05640 PF02567 Phenazine biosynthesis-like protein IC774_05645 PF00675 Insulinase (Peptidase family M16) IC774_05645 PF05193 Peptidase M16 inactive domain IC774_05670 PF02581 Thiamine monophosphate synthase IC774_05675 PF00202 Aminotransferase class-III IC774_05685 PF00849 RNA pseudouridylate synthase IC774_05690 PF00176 SNF2 family N-terminal domain IC774_05690 PF18339 RapA N-terminal Tudor like domain 1 IC774_05690 PF00271 Helicase conserved C-terminal domain IC774_05690 PF18337 RapA N-terminal Tudor like domain IC774_05690 PF12137 RNA polymerase recycling family C-terminal IC774_05700 PF00440 Bacterial regulatory proteins, tetR family IC774_05705 PF00175 Oxidoreductase NAD-binding domain IC774_05705 PF00111 2Fe-2S iron-sulfur cluster binding domain IC774_05705 PF00970 Oxidoreductase FAD-binding domain IC774_05710 PF00487 Fatty acid desaturase IC774_05730 PF00202 Aminotransferase class-III IC774_05735 PF00282 Pyridoxal-dependent decarboxylase conserved domain IC774_05740 PF00171 Aldehyde dehydrogenase family IC774_05750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC774_05750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC774_05750 PF00205 Thiamine pyrophosphate enzyme, central domain IC774_05755 PF00324 Amino acid permease IC774_05760 PF12849 PBP superfamily domain IC774_05765 PF00528 Binding-protein-dependent transport system inner membrane component IC774_05770 PF00528 Binding-protein-dependent transport system inner membrane component IC774_05775 PF00005 ABC transporter IC774_05780 PF01343 Peptidase family S49 IC774_05780 PF08496 Peptidase family S49 N-terminal IC774_05795 PF09997 Predicted membrane protein (DUF2238) IC774_05800 PF08328 Adenylosuccinate lyase C-terminal IC774_05800 PF00206 Lyase IC774_05805 PF04356 Protein of unknown function (DUF489) IC774_05815 PF00293 NUDIX domain IC774_05820 PF00132 Bacterial transferase hexapeptide (six repeats) IC774_05825 PF00768 D-alanyl-D-alanine carboxypeptidase IC774_05825 PF07943 Penicillin-binding protein 5, C-terminal domain IC774_05845 PF01551 Peptidase family M23 IC774_05845 PF01476 LysM domain IC774_05850 PF03466 LysR substrate binding domain IC774_05850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_05855 PF05362 Lon protease (S16) C-terminal proteolytic domain IC774_05855 PF13654 AAA domain IC774_05860 PF07690 Major Facilitator Superfamily IC774_05865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC774_05870 PF13593 SBF-like CPA transporter family (DUF4137) IC774_05875 PF01197 Ribosomal protein L31 IC774_05880 PF12792 CSS motif domain associated with EAL IC774_05880 PF00563 EAL domain IC774_05890 PF04055 Radical SAM superfamily IC774_05895 PF09285 Elongation factor P, C-terminal IC774_05895 PF01132 Elongation factor P (EF-P) OB domain IC774_05895 PF08207 Elongation factor P (EF-P) KOW-like domain IC774_05900 PF02554 Carbon starvation protein CstA IC774_05900 PF13722 5TM C-terminal transporter carbon starvation CstA IC774_05905 PF04328 Selenoprotein, putative IC774_05915 PF02705 K+ potassium transporter IC774_05935 PF07690 Major Facilitator Superfamily IC774_05945 PF02417 Chromate transporter IC774_05950 PF09828 Chromate resistance exported protein IC774_05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_05955 PF03466 LysR substrate binding domain IC774_05975 PF02789 Cytosol aminopeptidase family, N-terminal domain IC774_05975 PF00883 Cytosol aminopeptidase family, catalytic domain IC774_05980 PF02423 Ornithine cyclodeaminase/mu-crystallin family IC774_05985 PF00291 Pyridoxal-phosphate dependent enzyme IC774_05990 PF13309 HTH domain IC774_05990 PF08348 YheO-like PAS domain IC774_05995 PF01757 Acyltransferase family IC774_06000 PF13936 Helix-turn-helix domain IC774_06000 PF00665 Integrase core domain IC774_06005 PF01757 Acyltransferase family IC774_06015 PF02678 Pirin IC774_06015 PF17954 Quercetinase C-terminal cupin domain IC774_06030 PF05675 Protein of unknown function (DUF817) IC774_06045 PF00144 Beta-lactamase IC774_06050 PF01227 GTP cyclohydrolase I IC774_06055 PF00111 2Fe-2S iron-sulfur cluster binding domain IC774_06055 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IC774_06055 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IC774_06055 PF01799 [2Fe-2S] binding domain IC774_06060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IC774_06060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IC774_06070 PF01713 Smr domain IC774_06075 PF00218 Indole-3-glycerol phosphate synthase IC774_06080 PF00591 Glycosyl transferase family, a/b domain IC774_06080 PF02885 Glycosyl transferase family, helical bundle domain IC774_06085 PF00117 Glutamine amidotransferase class-I IC774_06095 PF00854 POT family IC774_06100 PF00120 Glutamine synthetase, catalytic domain IC774_06100 PF03951 Glutamine synthetase, beta-Grasp domain IC774_06105 PF04345 Chorismate lyase IC774_06145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IC774_06145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IC774_06150 PF01784 NIF3 (NGG1p interacting factor 3) IC774_06155 PF13180 PDZ domain IC774_06160 PF12627 Probable RNA and SrmB- binding site of polymerase A IC774_06160 PF01743 Poly A polymerase head domain IC774_06165 PF00390 Malic enzyme, N-terminal domain IC774_06165 PF03949 Malic enzyme, NAD binding domain IC774_06165 PF01515 Phosphate acetyl/butaryl transferase IC774_06180 PF02219 Methylenetetrahydrofolate reductase IC774_06200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_06200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_06200 PF09317 Domain of unknown function (DUF1974) IC774_06205 PF04055 Radical SAM superfamily IC774_06210 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_06210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC774_06230 PF00557 Metallopeptidase family M24 IC774_06235 PF00318 Ribosomal protein S2 IC774_06240 PF00889 Elongation factor TS IC774_06270 PF03330 Lytic transglycolase IC774_06270 PF05036 Sporulation related domain IC774_06275 PF13406 Transglycosylase SLT domain IC774_06280 PF01098 Cell cycle protein IC774_06290 PF14489 QueF-like protein IC774_06290 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IC774_06295 PF01061 ABC-2 type transporter IC774_06300 PF00005 ABC transporter IC774_06305 PF00589 Phage integrase family IC774_06395 PF00772 DnaB-like helicase N terminal domain IC774_06395 PF03796 DnaB-like helicase C terminal domain IC774_06440 PF00149 Calcineurin-like phosphoesterase IC774_06585 PF12826 Helix-hairpin-helix motif IC774_06585 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IC774_06585 PF01653 NAD-dependent DNA ligase adenylation domain IC774_06585 PF03120 NAD-dependent DNA ligase OB-fold domain IC774_06585 PF00533 BRCA1 C Terminus (BRCT) domain IC774_06605 PF00589 Phage integrase family IC774_06695 PF00772 DnaB-like helicase N terminal domain IC774_06695 PF03796 DnaB-like helicase C terminal domain IC774_06740 PF00149 Calcineurin-like phosphoesterase IC774_06885 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IC774_06885 PF03120 NAD-dependent DNA ligase OB-fold domain IC774_06885 PF12826 Helix-hairpin-helix motif IC774_06885 PF01653 NAD-dependent DNA ligase adenylation domain IC774_06885 PF00533 BRCA1 C Terminus (BRCT) domain IC774_06925 PF00464 Serine hydroxymethyltransferase IC774_06930 PF02321 Outer membrane efflux protein IC774_06935 PF00873 AcrB/AcrD/AcrF family IC774_06940 PF13533 Biotin-lipoyl like IC774_06945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_06945 PF03466 LysR substrate binding domain IC774_06955 PF00528 Binding-protein-dependent transport system inner membrane component IC774_06960 PF00528 Binding-protein-dependent transport system inner membrane component IC774_06965 PF00005 ABC transporter IC774_06970 PF00893 Small Multidrug Resistance protein IC774_06975 PF00037 4Fe-4S binding domain IC774_06980 PF16325 Peptidase family U32 C-terminal domain IC774_06980 PF01136 Peptidase family U32 IC774_06985 PF00392 Bacterial regulatory proteins, gntR family IC774_06985 PF00155 Aminotransferase class I and II IC774_06990 PF02567 Phenazine biosynthesis-like protein IC774_06995 PF00175 Oxidoreductase NAD-binding domain IC774_06995 PF00970 Oxidoreductase FAD-binding domain IC774_07000 PF18389 TrmO C-terminal domain IC774_07000 PF01980 tRNA-methyltransferase O IC774_07010 PF00437 Type II/IV secretion system protein IC774_07010 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IC774_07020 PF00072 Response regulator receiver domain IC774_07020 PF00486 Transcriptional regulatory protein, C terminal IC774_07025 PF00512 His Kinase A (phospho-acceptor) domain IC774_07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_07025 PF08521 Two-component sensor kinase N-terminal IC774_07045 PF00905 Penicillin binding protein transpeptidase domain IC774_07045 PF00912 Transglycosylase IC774_07045 PF14814 Bifunctional transglycosylase second domain IC774_07050 PF01513 ATP-NAD kinase IC774_07055 PF07023 Protein of unknown function (DUF1315) IC774_07060 PF00591 Glycosyl transferase family, a/b domain IC774_07060 PF02885 Glycosyl transferase family, helical bundle domain IC774_07065 PF00375 Sodium:dicarboxylate symporter family IC774_07070 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_07070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_07070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_07085 PF01842 ACT domain IC774_07085 PF01817 Chorismate mutase type II IC774_07085 PF00800 Prephenate dehydratase IC774_07090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IC774_07100 PF03781 Sulfatase-modifying factor enzyme 1 IC774_07105 PF07687 Peptidase dimerisation domain IC774_07105 PF01546 Peptidase family M20/M25/M40 IC774_07110 PF01137 RNA 3'-terminal phosphate cyclase IC774_07110 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain IC774_07125 PF01139 tRNA-splicing ligase RtcB IC774_07130 PF00753 Metallo-beta-lactamase superfamily IC774_07135 PF00158 Sigma-54 interaction domain IC774_07135 PF06956 Regulator of RNA terminal phosphate cyclase IC774_07145 PF03883 Peroxide stress protein YaaA IC774_07150 PF05690 Thiazole biosynthesis protein ThiG IC774_07160 PF04241 Protein of unknown function (DUF423) IC774_07165 PF00140 Sigma-70 factor, region 1.2 IC774_07165 PF04542 Sigma-70 region 2 IC774_07165 PF04545 Sigma-70, region 4 IC774_07175 PF00313 'Cold-shock' DNA-binding domain IC774_07180 PF00271 Helicase conserved C-terminal domain IC774_07180 PF00270 DEAD/DEAH box helicase IC774_07190 PF00881 Nitroreductase family IC774_07195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IC774_07195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IC774_07215 PF01180 Dihydroorotate dehydrogenase IC774_07240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IC774_07240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IC774_07245 PF01435 Peptidase family M48 IC774_07250 PF09424 Yqey-like protein IC774_07255 PF01165 Ribosomal protein S21 IC774_07260 PF00814 Glycoprotease family IC774_07280 PF00069 Protein kinase domain IC774_07280 PF03793 PASTA domain IC774_07325 PF00202 Aminotransferase class-III IC774_07330 PF00171 Aldehyde dehydrogenase family IC774_07335 PF00324 Amino acid permease IC774_07385 PF00857 Isochorismatase family IC774_07390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_07390 PF03466 LysR substrate binding domain IC774_07400 PF00743 Flavin-binding monooxygenase-like IC774_07410 PF00561 alpha/beta hydrolase fold IC774_07420 PF01370 NAD dependent epimerase/dehydratase family IC774_07425 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC774_07425 PF12833 Helix-turn-helix domain IC774_07430 PF03616 Sodium/glutamate symporter IC774_07515 PF00440 Bacterial regulatory proteins, tetR family IC774_07525 PF02805 Metal binding domain of Ada IC774_07525 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IC774_07525 PF12833 Helix-turn-helix domain IC774_07525 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IC774_07540 PF06826 Predicted Permease Membrane Region IC774_07540 PF02080 TrkA-C domain IC774_07555 PF03466 LysR substrate binding domain IC774_07555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_07565 PF04403 Paraquat-inducible protein A IC774_07570 PF02470 MlaD protein IC774_07580 PF00576 HIUase/Transthyretin family IC774_07590 PF00072 Response regulator receiver domain IC774_07590 PF00486 Transcriptional regulatory protein, C terminal IC774_07595 PF00672 HAMP domain IC774_07595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_07595 PF00512 His Kinase A (phospho-acceptor) domain IC774_07635 PF00512 His Kinase A (phospho-acceptor) domain IC774_07635 PF08521 Two-component sensor kinase N-terminal IC774_07635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_07640 PF00486 Transcriptional regulatory protein, C terminal IC774_07640 PF00072 Response regulator receiver domain IC774_07655 PF00892 EamA-like transporter family IC774_07660 PF00107 Zinc-binding dehydrogenase IC774_07660 PF08240 Alcohol dehydrogenase GroES-like domain IC774_07665 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC774_07670 PF05853 beta-keto acid cleavage enzyme IC774_07675 PF07690 Major Facilitator Superfamily IC774_07690 PF03601 Conserved hypothetical protein 698 IC774_07715 PF07995 Glucose / Sorbosone dehydrogenase IC774_07735 PF00375 Sodium:dicarboxylate symporter family IC774_07745 PF16123 Hydroxyacylglutathione hydrolase C-terminus IC774_07745 PF00753 Metallo-beta-lactamase superfamily IC774_07750 PF00528 Binding-protein-dependent transport system inner membrane component IC774_07755 PF00005 ABC transporter IC774_07755 PF09383 NIL domain IC774_07760 PF03180 NLPA lipoprotein IC774_07765 PF02843 Phosphoribosylglycinamide synthetase, C domain IC774_07765 PF02844 Phosphoribosylglycinamide synthetase, N domain IC774_07765 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IC774_07770 PF01808 AICARFT/IMPCHase bienzyme IC774_07770 PF02142 MGS-like domain IC774_07775 PF02954 Bacterial regulatory protein, Fis family IC774_07805 PF14403 Circularly permuted ATP-grasp type 2 IC774_07815 PF08379 Bacterial transglutaminase-like N-terminal region IC774_07815 PF01841 Transglutaminase-like superfamily IC774_07825 PF00842 Alanine racemase, C-terminal domain IC774_07825 PF01168 Alanine racemase, N-terminal domain IC774_07830 PF00772 DnaB-like helicase N terminal domain IC774_07830 PF03796 DnaB-like helicase C terminal domain IC774_07835 PF03948 Ribosomal protein L9, C-terminal domain IC774_07835 PF01281 Ribosomal protein L9, N-terminal domain IC774_07840 PF01084 Ribosomal protein S18 IC774_07845 PF01250 Ribosomal protein S6 IC774_07850 PF01040 UbiA prenyltransferase family IC774_07855 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IC774_07860 PF00510 Cytochrome c oxidase subunit III IC774_07865 PF00115 Cytochrome C and Quinol oxidase polypeptide I IC774_07870 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IC774_07870 PF06481 COX Aromatic Rich Motif IC774_07880 PF00391 PEP-utilising enzyme, mobile domain IC774_07880 PF02896 PEP-utilising enzyme, TIM barrel domain IC774_07880 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IC774_07885 PF03618 Kinase/pyrophosphorylase IC774_07895 PF01522 Polysaccharide deacetylase IC774_07895 PF14883 Hypothetical glycosyl hydrolase family 13 IC774_07900 PF00535 Glycosyl transferase family 2 IC774_07905 PF13994 PgaD-like protein IC774_07915 PF00296 Luciferase-like monooxygenase IC774_07930 PF00472 RF-1 domain IC774_07930 PF03462 PCRF domain IC774_07935 PF13847 Methyltransferase domain IC774_07935 PF17827 PrmC N-terminal domain IC774_07940 PF00528 Binding-protein-dependent transport system inner membrane component IC774_07945 PF09084 NMT1/THI5 like IC774_07950 PF12833 Helix-turn-helix domain IC774_07955 PF00106 short chain dehydrogenase IC774_07960 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_07960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_07960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_07965 PF13193 AMP-binding enzyme C-terminal domain IC774_07965 PF00501 AMP-binding enzyme IC774_07970 PF01613 Flavin reductase like domain IC774_07975 PF00899 ThiF family IC774_07980 PF03109 ABC1 family IC774_07995 PF03814 Potassium-transporting ATPase A subunit IC774_08005 PF02669 K+-transporting ATPase, c chain IC774_08010 PF02702 Osmosensitive K+ channel His kinase sensor domain IC774_08010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_08010 PF13493 Domain of unknown function (DUF4118) IC774_08010 PF00512 His Kinase A (phospho-acceptor) domain IC774_08015 PF00072 Response regulator receiver domain IC774_08015 PF00486 Transcriptional regulatory protein, C terminal IC774_08020 PF00120 Glutamine synthetase, catalytic domain IC774_08030 PF03232 Ubiquinone biosynthesis protein COQ7 IC774_08035 PF07690 Major Facilitator Superfamily IC774_08040 PF01103 Surface antigen IC774_08040 PF07244 Surface antigen variable number repeat IC774_08040 PF17243 POTRA domain TamA domain 1 IC774_08060 PF06434 Aconitate hydratase 2 N-terminus IC774_08060 PF00330 Aconitase family (aconitate hydratase) IC774_08060 PF11791 Aconitate B N-terminal domain IC774_08070 PF00520 Ion transport protein IC774_08070 PF00027 Cyclic nucleotide-binding domain IC774_08075 PF07690 Major Facilitator Superfamily IC774_08085 PF03466 LysR substrate binding domain IC774_08085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_08090 PF04284 Protein of unknown function (DUF441) IC774_08100 PF01479 S4 domain IC774_08100 PF00849 RNA pseudouridylate synthase IC774_08115 PF00849 RNA pseudouridylate synthase IC774_08115 PF01479 S4 domain IC774_08120 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IC774_08125 PF08676 MutL C terminal dimerisation domain IC774_08125 PF01119 DNA mismatch repair protein, C-terminal domain IC774_08135 PF17209 Hfq protein IC774_08145 PF00881 Nitroreductase family IC774_08155 PF00149 Calcineurin-like phosphoesterase IC774_08165 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IC774_08165 PF00749 tRNA synthetases class I (E and Q), catalytic domain IC774_08170 PF00958 GMP synthase C terminal domain IC774_08170 PF02540 NAD synthase IC774_08170 PF00117 Glutamine amidotransferase class-I IC774_08175 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IC774_08180 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IC774_08185 PF13520 Amino acid permease IC774_08190 PF00171 Aldehyde dehydrogenase family IC774_08210 PF14493 Helix-turn-helix domain IC774_08210 PF05970 PIF1-like helicase IC774_08220 PF06445 GyrI-like small molecule binding domain IC774_08225 PF02110 Hydroxyethylthiazole kinase family IC774_08255 PF13954 PapC N-terminal domain IC774_08255 PF00577 Outer membrane usher protein IC774_08255 PF13953 PapC C-terminal domain IC774_08270 PF02798 Glutathione S-transferase, N-terminal domain IC774_08290 PF01037 Lrp/AsnC ligand binding domain IC774_08330 PF06276 Ferric iron reductase FhuF-like transporter IC774_08330 PF04183 IucA / IucC family IC774_08335 PF07690 Major Facilitator Superfamily IC774_08340 PF06276 Ferric iron reductase FhuF-like transporter IC774_08340 PF04183 IucA / IucC family IC774_08350 PF00291 Pyridoxal-phosphate dependent enzyme IC774_08360 PF00924 Mechanosensitive ion channel IC774_08405 PF12848 ABC transporter IC774_08405 PF16326 ABC transporter C-terminal domain IC774_08405 PF00005 ABC transporter IC774_08410 PF00582 Universal stress protein family IC774_08430 PF02308 MgtC family IC774_08435 PF03594 Benzoate membrane transport protein IC774_08440 PF01037 Lrp/AsnC ligand binding domain IC774_08450 PF13936 Helix-turn-helix domain IC774_08450 PF00665 Integrase core domain IC774_08460 PF00923 Transaldolase/Fructose-6-phosphate aldolase IC774_08465 PF03466 LysR substrate binding domain IC774_08465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_08475 PF00108 Thiolase, N-terminal domain IC774_08475 PF02803 Thiolase, C-terminal domain IC774_08485 PF01575 MaoC like domain IC774_08490 PF00144 Beta-lactamase IC774_08500 PF07690 Major Facilitator Superfamily IC774_08515 PF12169 DNA polymerase III subunits gamma and tau domain III IC774_08515 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IC774_08515 PF12170 DNA polymerase III tau subunit V interacting with alpha IC774_08520 PF05506 Domain of unknown function (DUF756) IC774_08520 PF04185 Phosphoesterase family IC774_08525 PF03061 Thioesterase superfamily IC774_08530 PF00465 Iron-containing alcohol dehydrogenase IC774_08540 PF00857 Isochorismatase family IC774_08545 PF01638 HxlR-like helix-turn-helix IC774_08555 PF01451 Low molecular weight phosphotyrosine protein phosphatase IC774_08560 PF01565 FAD binding domain IC774_08560 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IC774_08610 PF00577 Outer membrane usher protein IC774_08610 PF13953 PapC C-terminal domain IC774_08610 PF13954 PapC N-terminal domain IC774_08630 PF12832 MFS_1 like family IC774_08640 PF00289 Biotin carboxylase, N-terminal domain IC774_08640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC774_08640 PF02785 Biotin carboxylase C-terminal domain IC774_08645 PF00364 Biotin-requiring enzyme IC774_08650 PF01220 Dehydroquinase class II IC774_08655 PF13438 Domain of unknown function (DUF4113) IC774_08655 PF00817 impB/mucB/samB family IC774_08655 PF11799 impB/mucB/samB family C-terminal domain IC774_08665 PF00005 ABC transporter IC774_08670 PF00486 Transcriptional regulatory protein, C terminal IC774_08670 PF00072 Response regulator receiver domain IC774_08685 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_08685 PF18267 Rubredoxin NAD+ reductase C-terminal domain IC774_08685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IC774_08685 PF04324 BFD-like [2Fe-2S] binding domain IC774_08685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IC774_08690 PF01568 Molydopterin dinucleotide binding domain IC774_08690 PF00384 Molybdopterin oxidoreductase IC774_08690 PF04324 BFD-like [2Fe-2S] binding domain IC774_08690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IC774_08695 PF12804 MobA-like NTP transferase domain IC774_08700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IC774_08700 PF00384 Molybdopterin oxidoreductase IC774_08700 PF01568 Molydopterin dinucleotide binding domain IC774_08705 PF04055 Radical SAM superfamily IC774_08705 PF06463 Molybdenum Cofactor Synthesis C IC774_08715 PF02391 MoaE protein IC774_08725 PF00994 Probable molybdopterin binding domain IC774_08725 PF03454 MoeA C-terminal region (domain IV) IC774_08725 PF03453 MoeA N-terminal region (domain I and II) IC774_08730 PF01638 HxlR-like helix-turn-helix IC774_08735 PF00392 Bacterial regulatory proteins, gntR family IC774_08735 PF00155 Aminotransferase class I and II IC774_08740 PF00892 EamA-like transporter family IC774_08760 PF02635 DsrE/DsrF-like family IC774_08765 PF16363 GDP-mannose 4,6 dehydratase IC774_08770 PF10415 Fumarase C C-terminus IC774_08770 PF00206 Lyase IC774_08790 PF01266 FAD dependent oxidoreductase IC774_08800 PF02542 YgbB family IC774_08810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IC774_08810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IC774_08815 PF00440 Bacterial regulatory proteins, tetR family IC774_08820 PF02954 Bacterial regulatory protein, Fis family IC774_08820 PF00158 Sigma-54 interaction domain IC774_08820 PF00072 Response regulator receiver domain IC774_08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_08825 PF00512 His Kinase A (phospho-acceptor) domain IC774_08825 PF00989 PAS fold IC774_08835 PF00919 Uncharacterized protein family UPF0004 IC774_08835 PF04055 Radical SAM superfamily IC774_08835 PF18693 TRAM domain IC774_08840 PF00696 Amino acid kinase family IC774_08845 PF01765 Ribosome recycling factor IC774_08850 PF01255 Putative undecaprenyl diphosphate synthase IC774_08860 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IC774_08860 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IC774_08860 PF13288 DXP reductoisomerase C-terminal domain IC774_08865 PF02163 Peptidase family M50 IC774_08865 PF17820 PDZ domain IC774_08865 PF13180 PDZ domain IC774_08870 PF01103 Surface antigen IC774_08870 PF07244 Surface antigen variable number repeat IC774_08880 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IC774_08880 PF00132 Bacterial transferase hexapeptide (six repeats) IC774_08885 PF07977 FabA-like domain IC774_08890 PF00132 Bacterial transferase hexapeptide (six repeats) IC774_08890 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IC774_08905 PF02631 RecX family IC774_08910 PF00154 recA bacterial DNA recombination protein IC774_08915 PF01479 S4 domain IC774_08920 PF13419 Haloacid dehalogenase-like hydrolase IC774_08935 PF01037 Lrp/AsnC ligand binding domain IC774_08940 PF00266 Aminotransferase class-V IC774_08945 PF00324 Amino acid permease IC774_08960 PF00916 Sulfate permease family IC774_08960 PF01740 STAS domain IC774_08965 PF07995 Glucose / Sorbosone dehydrogenase IC774_08975 PF00990 Diguanylate cyclase, GGDEF domain IC774_08975 PF00563 EAL domain IC774_08975 PF03707 Bacterial signalling protein N terminal repeat IC774_08995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IC774_08995 PF02378 Phosphotransferase system, EIIC IC774_09000 PF00294 pfkB family carbohydrate kinase IC774_09005 PF00381 PTS HPr component phosphorylation site IC774_09005 PF05524 PEP-utilising enzyme, N-terminal IC774_09005 PF00391 PEP-utilising enzyme, mobile domain IC774_09005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IC774_09005 PF02896 PEP-utilising enzyme, TIM barrel domain IC774_09030 PF05525 Branched-chain amino acid transport protein IC774_09035 PF00557 Metallopeptidase family M24 IC774_09040 PF03466 LysR substrate binding domain IC774_09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_09050 PF00462 Glutaredoxin IC774_09055 PF00202 Aminotransferase class-III IC774_09060 PF00571 CBS domain IC774_09085 PF02881 SRP54-type protein, helical bundle domain IC774_09085 PF00448 SRP54-type protein, GTPase domain IC774_09110 PF08173 Membrane bound YbgT-like protein IC774_09115 PF02322 Cytochrome bd terminal oxidase subunit II IC774_09120 PF01654 Cytochrome bd terminal oxidase subunit I IC774_09130 PF07290 Protein of unknown function (DUF1449) IC774_09140 PF00294 pfkB family carbohydrate kinase IC774_09145 PF07715 TonB-dependent Receptor Plug Domain IC774_09145 PF00593 TonB dependent receptor IC774_09150 PF00675 Insulinase (Peptidase family M16) IC774_09150 PF08367 Peptidase M16C associated IC774_09150 PF05193 Peptidase M16 inactive domain IC774_09155 PF02253 Phospholipase A1 IC774_09160 PF02386 Cation transport protein IC774_09165 PF02080 TrkA-C domain IC774_09165 PF02254 TrkA-N domain IC774_09170 PF00585 C-terminal regulatory domain of Threonine dehydratase IC774_09170 PF00291 Pyridoxal-phosphate dependent enzyme IC774_09175 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IC774_09190 PF01118 Semialdehyde dehydrogenase, NAD binding domain IC774_09190 PF02774 Semialdehyde dehydrogenase, dimerisation domain IC774_09200 PF02617 ATP-dependent Clp protease adaptor protein ClpS IC774_09205 PF17871 AAA lid domain IC774_09205 PF07724 AAA domain (Cdc48 subfamily) IC774_09205 PF10431 C-terminal, D2-small domain, of ClpB protein IC774_09205 PF00004 ATPase family associated with various cellular activities (AAA) IC774_09205 PF02861 Clp amino terminal domain, pathogenicity island component IC774_09210 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IC774_09215 PF00793 DAHP synthetase I family IC774_09230 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_09230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC774_09260 PF00117 Glutamine amidotransferase class-I IC774_09260 PF06418 CTP synthase N-terminus IC774_09265 PF00793 DAHP synthetase I family IC774_09270 PF03952 Enolase, N-terminal domain IC774_09270 PF00113 Enolase, C-terminal TIM barrel domain IC774_09275 PF04239 Protein of unknown function (DUF421) IC774_09285 PF04977 Septum formation initiator IC774_09290 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IC774_09295 PF01144 Coenzyme A transferase IC774_09310 PF10397 Adenylosuccinate lyase C-terminus IC774_09310 PF00206 Lyase IC774_09315 PF00561 alpha/beta hydrolase fold IC774_09320 PF07690 Major Facilitator Superfamily IC774_09325 PF02627 Carboxymuconolactone decarboxylase family IC774_09330 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IC774_09330 PF00775 Dioxygenase IC774_09335 PF00775 Dioxygenase IC774_09345 PF05048 Periplasmic copper-binding protein (NosD) IC774_09355 PF01011 PQQ enzyme repeat IC774_09355 PF13360 PQQ-like domain IC774_09365 PF04143 Sulphur transport IC774_09375 PF00753 Metallo-beta-lactamase superfamily IC774_09380 PF09339 IclR helix-turn-helix domain IC774_09380 PF01614 Bacterial transcriptional regulator IC774_09385 PF03466 LysR substrate binding domain IC774_09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_09390 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_09390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_09390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_09405 PF00106 short chain dehydrogenase IC774_09425 PF01425 Amidase IC774_09445 PF00355 Rieske [2Fe-2S] domain IC774_09445 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC774_09460 PF00111 2Fe-2S iron-sulfur cluster binding domain IC774_09460 PF00175 Oxidoreductase NAD-binding domain IC774_09465 PF01613 Flavin reductase like domain IC774_09470 PF02311 AraC-like ligand binding domain IC774_09470 PF12833 Helix-turn-helix domain IC774_09475 PF01179 Copper amine oxidase, enzyme domain IC774_09475 PF07833 Copper amine oxidase N-terminal domain IC774_09475 PF02727 Copper amine oxidase, N2 domain IC774_09475 PF02728 Copper amine oxidase, N3 domain IC774_09490 PF00171 Aldehyde dehydrogenase family IC774_09495 PF12146 Serine aminopeptidase, S33 IC774_09505 PF01144 Coenzyme A transferase IC774_09510 PF01144 Coenzyme A transferase IC774_09515 PF00775 Dioxygenase IC774_09515 PF04444 Catechol dioxygenase N terminus IC774_09520 PF02426 Muconolactone delta-isomerase IC774_09525 PF13378 Enolase C-terminal domain-like IC774_09525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IC774_09530 PF03466 LysR substrate binding domain IC774_09530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_09550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC774_09550 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_09560 PF01872 RibD C-terminal domain IC774_09570 PF00376 MerR family regulatory protein IC774_09570 PF09278 MerR, DNA binding IC774_09580 PF12706 Beta-lactamase superfamily domain IC774_09585 PF00440 Bacterial regulatory proteins, tetR family IC774_09585 PF08359 YsiA-like protein, C-terminal region IC774_09655 PF07690 Major Facilitator Superfamily IC774_09670 PF00392 Bacterial regulatory proteins, gntR family IC774_09670 PF07702 UTRA domain IC774_09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_09675 PF03466 LysR substrate binding domain IC774_09685 PF01494 FAD binding domain IC774_09690 PF13417 Glutathione S-transferase, N-terminal domain IC774_09695 PF01557 Fumarylacetoacetate (FAA) hydrolase family IC774_09700 PF07690 Major Facilitator Superfamily IC774_09710 PF00529 HlyD membrane-fusion protein of T1SS IC774_09710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC774_09725 PF07731 Multicopper oxidase IC774_09725 PF07732 Multicopper oxidase IC774_09730 PF00264 Common central domain of tyrosinase IC774_09740 PF01032 FecCD transport family IC774_09745 PF00005 ABC transporter IC774_09765 PF14572 Phosphoribosyl synthetase-associated domain IC774_09765 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IC774_09770 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IC774_09805 PF07690 Major Facilitator Superfamily IC774_09830 PF02824 TGS domain IC774_09830 PF13291 ACT domain IC774_09830 PF04607 Region found in RelA / SpoT proteins IC774_09885 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC774_09890 PF00027 Cyclic nucleotide-binding domain IC774_09890 PF13545 Crp-like helix-turn-helix domain IC774_09895 PF00884 Sulfatase IC774_09900 PF00593 TonB dependent receptor IC774_09900 PF07715 TonB-dependent Receptor Plug Domain IC774_09905 PF00248 Aldo/keto reductase family IC774_09910 PF00296 Luciferase-like monooxygenase IC774_09915 PF07715 TonB-dependent Receptor Plug Domain IC774_09915 PF00593 TonB dependent receptor IC774_09925 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC774_09935 PF02472 Biopolymer transport protein ExbD/TolR IC774_09940 PF01618 MotA/TolQ/ExbB proton channel family IC774_09945 PF03544 Gram-negative bacterial TonB protein C-terminal IC774_09950 PF00005 ABC transporter IC774_09955 PF00528 Binding-protein-dependent transport system inner membrane component IC774_09960 PF00296 Luciferase-like monooxygenase IC774_09965 PF07715 TonB-dependent Receptor Plug Domain IC774_09965 PF00593 TonB dependent receptor IC774_09975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IC774_09980 PF02472 Biopolymer transport protein ExbD/TolR IC774_09985 PF01618 MotA/TolQ/ExbB proton channel family IC774_09990 PF03544 Gram-negative bacterial TonB protein C-terminal IC774_09995 PF00296 Luciferase-like monooxygenase IC774_10000 PF09084 NMT1/THI5 like IC774_10005 PF00528 Binding-protein-dependent transport system inner membrane component IC774_10010 PF00528 Binding-protein-dependent transport system inner membrane component IC774_10015 PF00005 ABC transporter IC774_10020 PF02416 mttA/Hcf106 family IC774_10025 PF02416 mttA/Hcf106 family IC774_10030 PF00902 Sec-independent protein translocase protein (TatC) IC774_10035 PF00158 Sigma-54 interaction domain IC774_10045 PF00665 Integrase core domain IC774_10045 PF13936 Helix-turn-helix domain IC774_10070 PF00664 ABC transporter transmembrane region IC774_10070 PF00005 ABC transporter IC774_10085 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC774_10085 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_10085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_10090 PF00005 ABC transporter IC774_10090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC774_10095 PF12911 N-terminal TM domain of oligopeptide transport permease C IC774_10095 PF00528 Binding-protein-dependent transport system inner membrane component IC774_10100 PF00528 Binding-protein-dependent transport system inner membrane component IC774_10130 PF16970 Type-1 fimbrial protein, A IC774_10135 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IC774_10135 PF02753 Pili assembly chaperone PapD, C-terminal domain IC774_10140 PF00577 Outer membrane usher protein IC774_10140 PF13954 PapC N-terminal domain IC774_10140 PF13953 PapC C-terminal domain IC774_10145 PF00419 Fimbrial protein IC774_10155 PF08240 Alcohol dehydrogenase GroES-like domain IC774_10155 PF00107 Zinc-binding dehydrogenase IC774_10165 PF00199 Catalase IC774_10175 PF02548 Ketopantoate hydroxymethyltransferase IC774_10180 PF13091 PLD-like domain IC774_10185 PF13091 PLD-like domain IC774_10195 PF02702 Osmosensitive K+ channel His kinase sensor domain IC774_10195 PF13493 Domain of unknown function (DUF4118) IC774_10195 PF00512 His Kinase A (phospho-acceptor) domain IC774_10195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_10200 PF00072 Response regulator receiver domain IC774_10200 PF00486 Transcriptional regulatory protein, C terminal IC774_10205 PF00529 HlyD membrane-fusion protein of T1SS IC774_10205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC774_10210 PF00873 AcrB/AcrD/AcrF family IC774_10225 PF01244 Membrane dipeptidase (Peptidase family M19) IC774_10230 PF13186 Iron-sulfur cluster-binding domain IC774_10230 PF04055 Radical SAM superfamily IC774_10235 PF05402 Coenzyme PQQ synthesis protein D (PqqD) IC774_10240 PF03070 TENA/THI-4/PQQC family IC774_10245 PF12706 Beta-lactamase superfamily domain IC774_10250 PF08042 PqqA family IC774_10255 PF02503 Polyphosphate kinase middle domain IC774_10255 PF13090 Polyphosphate kinase C-terminal domain 2 IC774_10255 PF17941 Polyphosphate kinase C-terminal domain 1 IC774_10255 PF13089 Polyphosphate kinase N-terminal domain IC774_10260 PF00149 Calcineurin-like phosphoesterase IC774_10275 PF00873 AcrB/AcrD/AcrF family IC774_10280 PF00550 Phosphopantetheine attachment site IC774_10280 PF00857 Isochorismatase family IC774_10285 PF13193 AMP-binding enzyme C-terminal domain IC774_10285 PF00501 AMP-binding enzyme IC774_10290 PF00425 chorismate binding enzyme IC774_10295 PF00106 short chain dehydrogenase IC774_10305 PF03621 MbtH-like protein IC774_10310 PF00501 AMP-binding enzyme IC774_10310 PF00975 Thioesterase domain IC774_10310 PF00668 Condensation domain IC774_10310 PF13193 AMP-binding enzyme C-terminal domain IC774_10310 PF00550 Phosphopantetheine attachment site IC774_10315 PF05977 Transmembrane secretion effector IC774_10320 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IC774_10320 PF01648 4'-phosphopantetheinyl transferase superfamily IC774_10335 PF03459 TOBE domain IC774_10335 PF00005 ABC transporter IC774_10340 PF00528 Binding-protein-dependent transport system inner membrane component IC774_10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_10350 PF03459 TOBE domain IC774_10355 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC774_10355 PF00355 Rieske [2Fe-2S] domain IC774_10360 PF00866 Ring hydroxylating beta subunit IC774_10365 PF00970 Oxidoreductase FAD-binding domain IC774_10365 PF00175 Oxidoreductase NAD-binding domain IC774_10365 PF00111 2Fe-2S iron-sulfur cluster binding domain IC774_10370 PF14525 AraC-binding-like domain IC774_10370 PF12833 Helix-turn-helix domain IC774_10380 PF01613 Flavin reductase like domain IC774_10395 PF01738 Dienelactone hydrolase family IC774_10405 PF07690 Major Facilitator Superfamily IC774_10410 PF12833 Helix-turn-helix domain IC774_10410 PF06719 AraC-type transcriptional regulator N-terminus IC774_10425 PF00753 Metallo-beta-lactamase superfamily IC774_10455 PF07690 Major Facilitator Superfamily IC774_10480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_10480 PF03466 LysR substrate binding domain IC774_10485 PF01144 Coenzyme A transferase IC774_10490 PF01144 Coenzyme A transferase IC774_10495 PF02667 Short chain fatty acid transporter IC774_10500 PF02803 Thiolase, C-terminal domain IC774_10500 PF00108 Thiolase, N-terminal domain IC774_10505 PF03466 LysR substrate binding domain IC774_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_10510 PF03466 LysR substrate binding domain IC774_10525 PF00206 Lyase IC774_10525 PF10415 Fumarase C C-terminus IC774_10530 PF07715 TonB-dependent Receptor Plug Domain IC774_10530 PF00593 TonB dependent receptor IC774_10535 PF00083 Sugar (and other) transporter IC774_10545 PF12833 Helix-turn-helix domain IC774_10545 PF06445 GyrI-like small molecule binding domain IC774_10560 PF01925 Sulfite exporter TauE/SafE IC774_10565 PF04273 Putative phosphatase (DUF442) IC774_10565 PF00753 Metallo-beta-lactamase superfamily IC774_10570 PF00753 Metallo-beta-lactamase superfamily IC774_10570 PF04273 Putative phosphatase (DUF442) IC774_10575 PF00158 Sigma-54 interaction domain IC774_10575 PF02954 Bacterial regulatory protein, Fis family IC774_10575 PF00072 Response regulator receiver domain IC774_10580 PF01062 Bestrophin, RFP-TM, chloride channel IC774_10585 PF08240 Alcohol dehydrogenase GroES-like domain IC774_10585 PF00107 Zinc-binding dehydrogenase IC774_10590 PF00106 short chain dehydrogenase IC774_10595 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_10595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC774_10600 PF02817 e3 binding domain IC774_10600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC774_10600 PF00364 Biotin-requiring enzyme IC774_10605 PF02780 Transketolase, C-terminal domain IC774_10605 PF02779 Transketolase, pyrimidine binding domain IC774_10610 PF00676 Dehydrogenase E1 component IC774_10615 PF04055 Radical SAM superfamily IC774_10630 PF00990 Diguanylate cyclase, GGDEF domain IC774_10630 PF05230 MASE2 domain IC774_10635 PF01264 Chorismate synthase IC774_10640 PF05175 Methyltransferase small domain IC774_10645 PF00291 Pyridoxal-phosphate dependent enzyme IC774_10655 PF17862 AAA+ lid domain IC774_10655 PF00004 ATPase family associated with various cellular activities (AAA) IC774_10655 PF01434 Peptidase family M41 IC774_10665 PF05166 YcgL domain IC774_10685 PF01612 3'-5' exonuclease IC774_10685 PF00570 HRDC domain IC774_10690 PF02132 RecR protein IC774_10690 PF13662 Toprim domain IC774_10695 PF02575 YbaB/EbfC DNA-binding family IC774_10705 PF01053 Cys/Met metabolism PLP-dependent enzyme IC774_10715 PF08241 Methyltransferase domain IC774_10740 PF01230 HIT domain IC774_10775 PF00005 ABC transporter IC774_10780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC774_10790 PF02684 Lipid-A-disaccharide synthetase IC774_10795 PF00593 TonB dependent receptor IC774_10795 PF07715 TonB-dependent Receptor Plug Domain IC774_10815 PF01925 Sulfite exporter TauE/SafE IC774_10820 PF00793 DAHP synthetase I family IC774_10835 PF00300 Histidine phosphatase superfamily (branch 1) IC774_10840 PF02277 Phosphoribosyltransferase IC774_10845 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IC774_10860 PF04073 Aminoacyl-tRNA editing domain IC774_10875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_10875 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_10875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_10880 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_10880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_10880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_10885 PF00487 Fatty acid desaturase IC774_10890 PF12852 Cupin IC774_10890 PF12833 Helix-turn-helix domain IC774_10900 PF00216 Bacterial DNA-binding protein IC774_10915 PF02082 Transcriptional regulator IC774_10920 PF00266 Aminotransferase class-V IC774_10925 PF01592 NifU-like N terminal domain IC774_10930 PF01521 Iron-sulphur cluster biosynthesis IC774_10935 PF07743 HSCB C-terminal oligomerisation domain IC774_10935 PF00226 DnaJ domain IC774_10940 PF00012 Hsp70 protein IC774_10945 PF00111 2Fe-2S iron-sulfur cluster binding domain IC774_10960 PF00271 Helicase conserved C-terminal domain IC774_10960 PF00270 DEAD/DEAH box helicase IC774_10960 PF03461 TRCF domain IC774_10960 PF17757 UvrB interaction domain IC774_10960 PF02559 CarD-like/TRCF domain IC774_10980 PF03737 Aldolase/RraA IC774_10985 PF13460 NAD(P)H-binding IC774_10990 PF01649 Ribosomal protein S20 IC774_11000 PF00459 Inositol monophosphatase family IC774_11015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC774_11015 PF00005 ABC transporter IC774_11020 PF00528 Binding-protein-dependent transport system inner membrane component IC774_11025 PF00528 Binding-protein-dependent transport system inner membrane component IC774_11050 PF03544 Gram-negative bacterial TonB protein C-terminal IC774_11055 PF01618 MotA/TolQ/ExbB proton channel family IC774_11060 PF02472 Biopolymer transport protein ExbD/TolR IC774_11065 PF02472 Biopolymer transport protein ExbD/TolR IC774_11075 PF01274 Malate synthase IC774_11195 PF04860 Phage portal protein IC774_11275 PF00772 DnaB-like helicase N terminal domain IC774_11275 PF03796 DnaB-like helicase C terminal domain IC774_11290 PF01726 LexA DNA binding domain IC774_11290 PF00717 Peptidase S24-like IC774_11330 PF00589 Phage integrase family IC774_11330 PF02899 Phage integrase, N-terminal SAM-like domain IC774_11335 PF03969 AFG1-like ATPase IC774_11345 PF00743 Flavin-binding monooxygenase-like IC774_11350 PF03956 Lysine exporter LysO IC774_11355 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IC774_11365 PF00216 Bacterial DNA-binding protein IC774_11370 PF00575 S1 RNA binding domain IC774_11375 PF02224 Cytidylate kinase IC774_11395 PF03167 Uracil DNA glycosylase superfamily IC774_11405 PF03934 Type II secretion system (T2SS), protein K IC774_11415 PF02501 Type II secretion system (T2SS), protein I IC774_11415 PF07963 Prokaryotic N-terminal methylation motif IC774_11430 PF01026 TatD related DNase IC774_11440 PF09115 DNA polymerase III, delta subunit, C terminal IC774_11445 PF02348 Cytidylyltransferase IC774_11455 PF00005 ABC transporter IC774_11455 PF00664 ABC transporter transmembrane region IC774_11465 PF01618 MotA/TolQ/ExbB proton channel family IC774_11475 PF13614 AAA domain IC774_11480 PF02527 rRNA small subunit methyltransferase G IC774_11485 PF00483 Nucleotidyl transferase IC774_11490 PF01636 Phosphotransferase enzyme family IC774_11495 PF03968 OstA-like protein IC774_11495 PF04453 LPS transport system D IC774_11505 PF01116 Fructose-bisphosphate aldolase class-II IC774_11515 PF00162 Phosphoglycerate kinase IC774_11525 PF02545 Maf-like protein IC774_11530 PF08007 Cupin superfamily protein IC774_11545 PF00375 Sodium:dicarboxylate symporter family IC774_11550 PF06912 Protein of unknown function (DUF1275) IC774_11555 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IC774_11560 PF00664 ABC transporter transmembrane region IC774_11560 PF00005 ABC transporter IC774_11570 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC774_11570 PF12833 Helix-turn-helix domain IC774_11575 PF01597 Glycine cleavage H-protein IC774_11580 PF02146 Sir2 family IC774_11585 PF00474 Sodium:solute symporter family IC774_11590 PF01037 Lrp/AsnC ligand binding domain IC774_11595 PF00171 Aldehyde dehydrogenase family IC774_11595 PF01619 Proline dehydrogenase IC774_11595 PF14850 DNA-binding domain of Proline dehydrogenase IC774_11595 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IC774_11605 PF05958 tRNA (Uracil-5-)-methyltransferase IC774_11615 PF09992 Phosphodiester glycosidase IC774_11625 PF04264 YceI-like domain IC774_11640 PF02779 Transketolase, pyrimidine binding domain IC774_11640 PF00456 Transketolase, thiamine diphosphate binding domain IC774_11640 PF02780 Transketolase, C-terminal domain IC774_11645 PF02773 S-adenosylmethionine synthetase, C-terminal domain IC774_11645 PF02772 S-adenosylmethionine synthetase, central domain IC774_11645 PF00438 S-adenosylmethionine synthetase, N-terminal domain IC774_11675 PF02075 Crossover junction endodeoxyribonuclease RuvC IC774_11680 PF01256 Carbohydrate kinase IC774_11680 PF03853 YjeF-related protein N-terminus IC774_11705 PF16970 Type-1 fimbrial protein, A IC774_11710 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IC774_11710 PF02753 Pili assembly chaperone PapD, C-terminal domain IC774_11730 PF00892 EamA-like transporter family IC774_11740 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IC774_11755 PF00665 Integrase core domain IC774_11755 PF13936 Helix-turn-helix domain IC774_11775 PF00196 Bacterial regulatory proteins, luxR family IC774_11775 PF03472 Autoinducer binding domain IC774_11785 PF00440 Bacterial regulatory proteins, tetR family IC774_11795 PF01709 Transcriptional regulator IC774_11800 PF01037 Lrp/AsnC ligand binding domain IC774_11810 PF00005 ABC transporter IC774_11815 PF00528 Binding-protein-dependent transport system inner membrane component IC774_11820 PF00528 Binding-protein-dependent transport system inner membrane component IC774_11835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_11835 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC774_11845 PF00296 Luciferase-like monooxygenase IC774_11850 PF03180 NLPA lipoprotein IC774_11855 PF03180 NLPA lipoprotein IC774_11860 PF00005 ABC transporter IC774_11860 PF09383 NIL domain IC774_11865 PF00528 Binding-protein-dependent transport system inner membrane component IC774_11870 PF06071 Protein of unknown function (DUF933) IC774_11870 PF01926 50S ribosome-binding GTPase IC774_11895 PF03591 AzlC protein IC774_11900 PF05437 Branched-chain amino acid transport protein (AzlD) IC774_11910 PF02222 ATP-grasp domain IC774_11915 PF01909 Nucleotidyltransferase domain IC774_11915 PF01966 HD domain IC774_11915 PF08335 GlnD PII-uridylyltransferase IC774_11920 PF00155 Aminotransferase class I and II IC774_11930 PF12833 Helix-turn-helix domain IC774_11930 PF02311 AraC-like ligand binding domain IC774_11935 PF00255 Glutathione peroxidase IC774_11940 PF01641 SelR domain IC774_11945 PF00155 Aminotransferase class I and II IC774_11950 PF00375 Sodium:dicarboxylate symporter family IC774_11955 PF17763 Glutaminase/Asparaginase C-terminal domain IC774_11955 PF00710 Asparaginase, N-terminal IC774_11960 PF14579 Helix-hairpin-helix motif IC774_11960 PF02811 PHP domain IC774_11960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IC774_11960 PF01336 OB-fold nucleic acid binding domain IC774_11960 PF07733 Bacterial DNA polymerase III alpha NTPase domain IC774_11965 PF00588 SpoU rRNA Methylase family IC774_11970 PF00132 Bacterial transferase hexapeptide (six repeats) IC774_11985 PF13192 Thioredoxin domain IC774_11985 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12000 PF03466 LysR substrate binding domain IC774_12005 PF03358 NADPH-dependent FMN reductase IC774_12010 PF01758 Sodium Bile acid symporter family IC774_12015 PF01022 Bacterial regulatory protein, arsR family IC774_12020 PF03960 ArsC family IC774_12030 PF01979 Amidohydrolase family IC774_12030 PF13382 Adenine deaminase C-terminal domain IC774_12050 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IC774_12055 PF01177 Asp/Glu/Hydantoin racemase IC774_12060 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC774_12065 PF00528 Binding-protein-dependent transport system inner membrane component IC774_12070 PF00005 ABC transporter IC774_12075 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IC774_12085 PF00083 Sugar (and other) transporter IC774_12090 PF00296 Luciferase-like monooxygenase IC774_12095 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC774_12095 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_12095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_12105 PF01654 Cytochrome bd terminal oxidase subunit I IC774_12110 PF02322 Cytochrome bd terminal oxidase subunit II IC774_12120 PF00392 Bacterial regulatory proteins, gntR family IC774_12120 PF00155 Aminotransferase class I and II IC774_12125 PF03466 LysR substrate binding domain IC774_12125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12140 PF00698 Acyl transferase domain IC774_12145 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG IC774_12155 PF01039 Carboxyl transferase domain IC774_12160 PF06857 Malonate decarboxylase delta subunit (MdcD) IC774_12165 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IC774_12170 PF16957 Malonate decarboxylase, alpha subunit, transporter IC774_12185 PF00155 Aminotransferase class I and II IC774_12185 PF00392 Bacterial regulatory proteins, gntR family IC774_12190 PF04172 LrgB-like family IC774_12195 PF03788 LrgA family IC774_12200 PF03466 LysR substrate binding domain IC774_12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12210 PF02798 Glutathione S-transferase, N-terminal domain IC774_12215 PF03466 LysR substrate binding domain IC774_12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12225 PF00581 Rhodanese-like domain IC774_12230 PF00132 Bacterial transferase hexapeptide (six repeats) IC774_12240 PF00266 Aminotransferase class-V IC774_12245 PF01810 LysE type translocator IC774_12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12250 PF03466 LysR substrate binding domain IC774_12255 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC774_12260 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC774_12265 PF00005 ABC transporter IC774_12270 PF00528 Binding-protein-dependent transport system inner membrane component IC774_12275 PF00528 Binding-protein-dependent transport system inner membrane component IC774_12290 PF07690 Major Facilitator Superfamily IC774_12295 PF03466 LysR substrate binding domain IC774_12295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12305 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IC774_12310 PF00072 Response regulator receiver domain IC774_12315 PF00072 Response regulator receiver domain IC774_12315 PF09308 LuxQ, periplasmic IC774_12315 PF00512 His Kinase A (phospho-acceptor) domain IC774_12315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_12325 PF01037 Lrp/AsnC ligand binding domain IC774_12325 PF13404 AsnC-type helix-turn-helix domain IC774_12335 PF00717 Peptidase S24-like IC774_12370 PF00994 Probable molybdopterin binding domain IC774_12370 PF18146 Damage-inducible protein CinA KH domain IC774_12370 PF02464 Competence-damaged protein IC774_12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12400 PF03466 LysR substrate binding domain IC774_12420 PF00501 AMP-binding enzyme IC774_12420 PF13193 AMP-binding enzyme C-terminal domain IC774_12425 PF00440 Bacterial regulatory proteins, tetR family IC774_12430 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_12430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_12430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_12435 PF01039 Carboxyl transferase domain IC774_12440 PF00378 Enoyl-CoA hydratase/isomerase IC774_12445 PF00364 Biotin-requiring enzyme IC774_12445 PF00289 Biotin carboxylase, N-terminal domain IC774_12445 PF18140 Propionyl-coenzyme A carboxylase BT domain IC774_12445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC774_12445 PF02785 Biotin carboxylase C-terminal domain IC774_12455 PF03466 LysR substrate binding domain IC774_12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_12470 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC774_12470 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_12470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_12480 PF07690 Major Facilitator Superfamily IC774_12490 PF01144 Coenzyme A transferase IC774_12500 PF07690 Major Facilitator Superfamily IC774_12505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_12505 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_12505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_12510 PF00378 Enoyl-CoA hydratase/isomerase IC774_12520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC774_12520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC774_12520 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IC774_12525 PF00108 Thiolase, N-terminal domain IC774_12525 PF02803 Thiolase, C-terminal domain IC774_12530 PF09339 IclR helix-turn-helix domain IC774_12535 PF07690 Major Facilitator Superfamily IC774_12545 PF03060 Nitronate monooxygenase IC774_12550 PF00378 Enoyl-CoA hydratase/isomerase IC774_12555 PF09339 IclR helix-turn-helix domain IC774_12560 PF02515 CoA-transferase family III IC774_12565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_12565 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_12565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_12570 PF07690 Major Facilitator Superfamily IC774_12575 PF13419 Haloacid dehalogenase-like hydrolase IC774_12580 PF00266 Aminotransferase class-V IC774_12585 PF01266 FAD dependent oxidoreductase IC774_12590 PF00528 Binding-protein-dependent transport system inner membrane component IC774_12605 PF07702 UTRA domain IC774_12605 PF00392 Bacterial regulatory proteins, gntR family IC774_12610 PF01168 Alanine racemase, N-terminal domain IC774_12610 PF00842 Alanine racemase, C-terminal domain IC774_12615 PF01494 FAD binding domain IC774_12620 PF09339 IclR helix-turn-helix domain IC774_12620 PF01614 Bacterial transcriptional regulator IC774_12625 PF02525 Flavodoxin-like fold IC774_12630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12630 PF03466 LysR substrate binding domain IC774_12645 PF01292 Prokaryotic cytochrome b561 IC774_12650 PF00199 Catalase IC774_12655 PF13520 Amino acid permease IC774_12660 PF01636 Phosphotransferase enzyme family IC774_12675 PF00202 Aminotransferase class-III IC774_12680 PF16295 Tetracyclin repressor-like, C-terminal domain IC774_12680 PF00440 Bacterial regulatory proteins, tetR family IC774_12745 PF00300 Histidine phosphatase superfamily (branch 1) IC774_12755 PF03061 Thioesterase superfamily IC774_12765 PF08223 PaaX-like protein C-terminal domain IC774_12765 PF07848 PaaX-like protein IC774_12770 PF14535 AMP-binding enzyme C-terminal domain IC774_12770 PF00501 AMP-binding enzyme IC774_12780 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IC774_12780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC774_12780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC774_12785 PF00378 Enoyl-CoA hydratase/isomerase IC774_12790 PF00378 Enoyl-CoA hydratase/isomerase IC774_12795 PF00111 2Fe-2S iron-sulfur cluster binding domain IC774_12795 PF00970 Oxidoreductase FAD-binding domain IC774_12795 PF00175 Oxidoreductase NAD-binding domain IC774_12800 PF01883 Iron-sulfur cluster assembly protein IC774_12805 PF05138 Phenylacetic acid catabolic protein IC774_12810 PF06243 Phenylacetic acid degradation B IC774_12815 PF05138 Phenylacetic acid catabolic protein IC774_12820 PF00171 Aldehyde dehydrogenase family IC774_12820 PF01575 MaoC like domain IC774_12825 PF03315 Serine dehydratase beta chain IC774_12825 PF03313 Serine dehydratase alpha chain IC774_12835 PF00376 MerR family regulatory protein IC774_12835 PF09278 MerR, DNA binding IC774_12845 PF02677 Epoxyqueuosine reductase QueH IC774_12865 PF07690 Major Facilitator Superfamily IC774_12870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IC774_12875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12875 PF03466 LysR substrate binding domain IC774_12895 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IC774_12900 PF06812 ImpA, N-terminal, type VI secretion system IC774_12905 PF17871 AAA lid domain IC774_12905 PF07724 AAA domain (Cdc48 subfamily) IC774_12905 PF00004 ATPase family associated with various cellular activities (AAA) IC774_12905 PF10431 C-terminal, D2-small domain, of ClpB protein IC774_12915 PF00691 OmpA family IC774_12915 PF01389 OmpA-like transmembrane domain IC774_12925 PF06761 Intracellular multiplication and human macrophage-killing IC774_12925 PF14331 ImcF-related N-terminal domain IC774_12925 PF06744 Type VI secretion protein IcmF C-terminal IC774_12940 PF05947 Type VI secretion system, TssF IC774_12955 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IC774_12970 PF03466 LysR substrate binding domain IC774_12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_12975 PF07690 Major Facilitator Superfamily IC774_12990 PF00005 ABC transporter IC774_12995 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC774_13000 PF01425 Amidase IC774_13005 PF01402 Ribbon-helix-helix protein, copG family IC774_13005 PF08753 NikR C terminal nickel binding domain IC774_13020 PF01638 HxlR-like helix-turn-helix IC774_13025 PF02525 Flavodoxin-like fold IC774_13030 PF02785 Biotin carboxylase C-terminal domain IC774_13030 PF00289 Biotin carboxylase, N-terminal domain IC774_13030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC774_13045 PF00107 Zinc-binding dehydrogenase IC774_13045 PF13823 Alcohol dehydrogenase GroES-associated IC774_13045 PF08240 Alcohol dehydrogenase GroES-like domain IC774_13090 PF00654 Voltage gated chloride channel IC774_13095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC774_13095 PF00364 Biotin-requiring enzyme IC774_13095 PF00289 Biotin carboxylase, N-terminal domain IC774_13095 PF02785 Biotin carboxylase C-terminal domain IC774_13105 PF07286 Protein of unknown function (DUF1445) IC774_13110 PF03746 LamB/YcsF family IC774_13115 PF01566 Natural resistance-associated macrophage protein IC774_13120 PF03466 LysR substrate binding domain IC774_13120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_13130 PF04542 Sigma-70 region 2 IC774_13130 PF08281 Sigma-70, region 4 IC774_13140 PF05114 Protein of unknown function (DUF692) IC774_13170 PF00892 EamA-like transporter family IC774_13185 PF06629 MltA-interacting protein MipA IC774_13190 PF00202 Aminotransferase class-III IC774_13235 PF03527 RHS protein IC774_13235 PF05593 RHS Repeat IC774_13320 PF16295 Tetracyclin repressor-like, C-terminal domain IC774_13320 PF00440 Bacterial regulatory proteins, tetR family IC774_13325 PF00313 'Cold-shock' DNA-binding domain IC774_13330 PF00117 Glutamine amidotransferase class-I IC774_13340 PF01037 Lrp/AsnC ligand binding domain IC774_13340 PF13404 AsnC-type helix-turn-helix domain IC774_13345 PF06865 Pyrimidine/purine nucleoside phosphorylase IC774_13360 PF13302 Acetyltransferase (GNAT) domain IC774_13365 PF07715 TonB-dependent Receptor Plug Domain IC774_13385 PF07690 Major Facilitator Superfamily IC774_13400 PF01979 Amidohydrolase family IC774_13405 PF03466 LysR substrate binding domain IC774_13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_13415 PF01654 Cytochrome bd terminal oxidase subunit I IC774_13420 PF02322 Cytochrome bd terminal oxidase subunit II IC774_13430 PF02649 Type I GTP cyclohydrolase folE2 IC774_13440 PF01979 Amidohydrolase family IC774_13450 PF03279 Bacterial lipid A biosynthesis acyltransferase IC774_13460 PF03707 Bacterial signalling protein N terminal repeat IC774_13460 PF00563 EAL domain IC774_13460 PF00990 Diguanylate cyclase, GGDEF domain IC774_13480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_13480 PF03466 LysR substrate binding domain IC774_13495 PF00037 4Fe-4S binding domain IC774_13495 PF11953 Domain of unknown function (DUF3470) IC774_13505 PF01596 O-methyltransferase IC774_13515 PF00132 Bacterial transferase hexapeptide (six repeats) IC774_13520 PF01205 Uncharacterized protein family UPF0029 IC774_13525 PF13533 Biotin-lipoyl like IC774_13525 PF13533 Biotin-lipoyl like IC774_13530 PF00664 ABC transporter transmembrane region IC774_13530 PF00005 ABC transporter IC774_13530 PF03412 Peptidase C39 family IC774_13535 PF02321 Outer membrane efflux protein IC774_13540 PF00005 ABC transporter IC774_13540 PF12399 Branched-chain amino acid ATP-binding cassette transporter IC774_13545 PF03968 OstA-like protein IC774_13560 PF01380 SIS domain IC774_13560 PF00571 CBS domain IC774_13565 PF01406 tRNA synthetases class I (C) catalytic domain IC774_13565 PF09190 DALR domain IC774_13580 PF00248 Aldo/keto reductase family IC774_13585 PF01638 HxlR-like helix-turn-helix IC774_13590 PF07690 Major Facilitator Superfamily IC774_13695 PF10124 Mu-like prophage major head subunit gpT IC774_13720 PF06074 Protein of unknown function (DUF935) IC774_13730 PF03237 Terminase-like family IC774_13735 PF11985 Protein of unknown function (DUF3486) IC774_13765 PF10502 Signal peptidase, peptidase S26 IC774_13830 PF00216 Bacterial DNA-binding protein IC774_13880 PF00313 'Cold-shock' DNA-binding domain IC774_13885 PF01810 LysE type translocator IC774_13920 PF02601 Exonuclease VII, large subunit IC774_13920 PF13742 OB-fold nucleic acid binding domain IC774_13955 PF09278 MerR, DNA binding IC774_13955 PF00376 MerR family regulatory protein IC774_13965 PF00403 Heavy-metal-associated domain IC774_13970 PF06505 Activator of aromatic catabolism IC774_13970 PF02830 V4R domain IC774_13970 PF02954 Bacterial regulatory protein, Fis family IC774_13970 PF00158 Sigma-54 interaction domain IC774_13980 PF06099 Phenol hydroxylase subunit IC774_13985 PF02332 Methane/Phenol/Toluene Hydroxylase IC774_13990 PF02406 MmoB/DmpM family IC774_13995 PF04945 YHS domain IC774_13995 PF02332 Methane/Phenol/Toluene Hydroxylase IC774_14005 PF00111 2Fe-2S iron-sulfur cluster binding domain IC774_14005 PF00970 Oxidoreductase FAD-binding domain IC774_14005 PF00175 Oxidoreductase NAD-binding domain IC774_14015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_14015 PF03466 LysR substrate binding domain IC774_14025 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC774_14025 PF00355 Rieske [2Fe-2S] domain IC774_14030 PF00866 Ring hydroxylating beta subunit IC774_14035 PF00970 Oxidoreductase FAD-binding domain IC774_14035 PF00111 2Fe-2S iron-sulfur cluster binding domain IC774_14035 PF00175 Oxidoreductase NAD-binding domain IC774_14040 PF00106 short chain dehydrogenase IC774_14045 PF03594 Benzoate membrane transport protein IC774_14060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IC774_14060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IC774_14070 PF00578 AhpC/TSA family IC774_14070 PF10417 C-terminal domain of 1-Cys peroxiredoxin IC774_14080 PF00487 Fatty acid desaturase IC774_14100 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_14100 PF13192 Thioredoxin domain IC774_14110 PF02798 Glutathione S-transferase, N-terminal domain IC774_14110 PF00043 Glutathione S-transferase, C-terminal domain IC774_14120 PF02390 Putative methyltransferase IC774_14135 PF00691 OmpA family IC774_14140 PF01979 Amidohydrolase family IC774_14145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IC774_14145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IC774_14155 PF10672 S-adenosylmethionine-dependent methyltransferase IC774_14155 PF02926 THUMP domain IC774_14155 PF01170 Putative RNA methylase family UPF0020 IC774_14170 PF00004 ATPase family associated with various cellular activities (AAA) IC774_14170 PF07724 AAA domain (Cdc48 subfamily) IC774_14170 PF02861 Clp amino terminal domain, pathogenicity island component IC774_14170 PF10431 C-terminal, D2-small domain, of ClpB protein IC774_14170 PF17871 AAA lid domain IC774_14185 PF02566 OsmC-like protein IC774_14190 PF00027 Cyclic nucleotide-binding domain IC774_14190 PF13545 Crp-like helix-turn-helix domain IC774_14195 PF00248 Aldo/keto reductase family IC774_14210 PF00709 Adenylosuccinate synthetase IC774_14215 PF13393 Histidyl-tRNA synthetase IC774_14225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IC774_14225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IC774_14230 PF02272 DHHA1 domain IC774_14230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IC774_14230 PF01411 tRNA synthetases class II (A) IC774_14235 PF13840 ACT domain IC774_14235 PF00696 Amino acid kinase family IC774_14235 PF01842 ACT domain IC774_14240 PF02599 Global regulator protein family IC774_14245 PF01351 Ribonuclease HII IC774_14255 PF01292 Prokaryotic cytochrome b561 IC774_14265 PF00860 Permease family IC774_14275 PF00743 Flavin-binding monooxygenase-like IC774_14280 PF00106 short chain dehydrogenase IC774_14290 PF02678 Pirin IC774_14290 PF17954 Quercetinase C-terminal cupin domain IC774_14295 PF00440 Bacterial regulatory proteins, tetR family IC774_14295 PF17932 Tetracyclin repressor-like, C-terminal domain IC774_14305 PF00106 short chain dehydrogenase IC774_14310 PF00743 Flavin-binding monooxygenase-like IC774_14315 PF04072 Leucine carboxyl methyltransferase IC774_14320 PF03466 LysR substrate binding domain IC774_14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_14325 PF07690 Major Facilitator Superfamily IC774_14330 PF05681 Fumarate hydratase (Fumerase) IC774_14335 PF05683 Fumarase C-terminus IC774_14340 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC774_14340 PF12833 Helix-turn-helix domain IC774_14345 PF00743 Flavin-binding monooxygenase-like IC774_14350 PF00106 short chain dehydrogenase IC774_14355 PF07859 alpha/beta hydrolase fold IC774_14360 PF05199 GMC oxidoreductase IC774_14365 PF18381 YcaO cyclodehydratase C-terminal domain IC774_14365 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IC774_14370 PF03573 outer membrane porin, OprD family IC774_14380 PF00355 Rieske [2Fe-2S] domain IC774_14400 PF07690 Major Facilitator Superfamily IC774_14405 PF00378 Enoyl-CoA hydratase/isomerase IC774_14410 PF00171 Aldehyde dehydrogenase family IC774_14420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_14420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_14420 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_14425 PF03573 outer membrane porin, OprD family IC774_14435 PF07519 Tannase and feruloyl esterase IC774_14440 PF00892 EamA-like transporter family IC774_14450 PF12833 Helix-turn-helix domain IC774_14450 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC774_14455 PF00171 Aldehyde dehydrogenase family IC774_14460 PF00324 Amino acid permease IC774_14465 PF04958 Arginine N-succinyltransferase beta subunit IC774_14470 PF00202 Aminotransferase class-III IC774_14480 PF00171 Aldehyde dehydrogenase family IC774_14490 PF07729 FCD domain IC774_14490 PF00392 Bacterial regulatory proteins, gntR family IC774_14500 PF00324 Amino acid permease IC774_14505 PF01266 FAD dependent oxidoreductase IC774_14510 PF00324 Amino acid permease IC774_14520 PF05643 Putative bacterial lipoprotein (DUF799) IC774_14530 PF03783 Curli production assembly/transport component CsgG IC774_14550 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IC774_14550 PF04717 Type VI secretion system, phage-baseplate injector IC774_14550 PF13296 Putative type VI secretion system Rhs element Vgr IC774_14555 PF00561 alpha/beta hydrolase fold IC774_14560 PF01047 MarR family IC774_14595 PF01925 Sulfite exporter TauE/SafE IC774_14605 PF03180 NLPA lipoprotein IC774_14610 PF05987 Bacterial protein of unknown function (DUF898) IC774_14620 PF01494 FAD binding domain IC774_14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_14630 PF03466 LysR substrate binding domain IC774_14635 PF01266 FAD dependent oxidoreductase IC774_14640 PF01042 Endoribonuclease L-PSP IC774_14655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC774_14655 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_14660 PF00764 Arginosuccinate synthase IC774_14665 PF00990 Diguanylate cyclase, GGDEF domain IC774_14665 PF00563 EAL domain IC774_14665 PF01590 GAF domain IC774_14665 PF00360 Phytochrome region IC774_14670 PF01979 Amidohydrolase family IC774_14675 PF00929 Exonuclease IC774_14695 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_14695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC774_14700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC774_14700 PF00005 ABC transporter IC774_14705 PF12911 N-terminal TM domain of oligopeptide transport permease C IC774_14705 PF00528 Binding-protein-dependent transport system inner membrane component IC774_14710 PF00528 Binding-protein-dependent transport system inner membrane component IC774_14715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IC774_14720 PF01464 Transglycosylase SLT domain IC774_14720 PF01476 LysM domain IC774_14725 PF00929 Exonuclease IC774_14735 PF00293 NUDIX domain IC774_14735 PF09297 NADH pyrophosphatase zinc ribbon domain IC774_14745 PF04972 BON domain IC774_14755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IC774_14765 PF03466 LysR substrate binding domain IC774_14765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_14770 PF01810 LysE type translocator IC774_14780 PF13411 MerR HTH family regulatory protein IC774_14790 PF01494 FAD binding domain IC774_14795 PF01494 FAD binding domain IC774_14800 PF05195 Aminopeptidase P, N-terminal domain IC774_14800 PF00557 Metallopeptidase family M24 IC774_14850 PF00717 Peptidase S24-like IC774_15130 PF17854 FtsK alpha domain IC774_15130 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IC774_15130 PF01580 FtsK/SpoIIIE family IC774_15130 PF09397 Ftsk gamma domain IC774_15165 PF04355 SmpA / OmlA family IC774_15165 PF00691 OmpA family IC774_15175 PF05662 Coiled stalk of trimeric autotransporter adhesin IC774_15175 PF05658 Head domain of trimeric autotransporter adhesin IC774_15175 PF03895 YadA-like membrane anchor domain IC774_15180 PF13018 Extended Signal Peptide of Type V secretion system IC774_15180 PF05662 Coiled stalk of trimeric autotransporter adhesin IC774_15180 PF05658 Head domain of trimeric autotransporter adhesin IC774_15180 PF03895 YadA-like membrane anchor domain IC774_15185 PF13018 Extended Signal Peptide of Type V secretion system IC774_15185 PF05662 Coiled stalk of trimeric autotransporter adhesin IC774_15185 PF03895 YadA-like membrane anchor domain IC774_15185 PF13018 Extended Signal Peptide of Type V secretion system IC774_15185 PF05658 Head domain of trimeric autotransporter adhesin IC774_15185 PF03895 YadA-like membrane anchor domain IC774_15185 PF03895 YadA-like membrane anchor domain IC774_15185 PF05658 Head domain of trimeric autotransporter adhesin IC774_15185 PF05662 Coiled stalk of trimeric autotransporter adhesin IC774_15185 PF13018 Extended Signal Peptide of Type V secretion system IC774_15185 PF05662 Coiled stalk of trimeric autotransporter adhesin IC774_15185 PF05658 Head domain of trimeric autotransporter adhesin IC774_15190 PF00691 OmpA family IC774_15190 PF04355 SmpA / OmlA family IC774_15200 PF00004 ATPase family associated with various cellular activities (AAA) IC774_15200 PF02190 ATP-dependent protease La (LON) substrate-binding domain IC774_15200 PF05362 Lon protease (S16) C-terminal proteolytic domain IC774_15205 PF02590 Predicted SPOUT methyltransferase IC774_15210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IC774_15220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IC774_15220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IC774_15225 PF04060 Putative Fe-S cluster IC774_15230 PF00633 Helix-hairpin-helix motif IC774_15230 PF10576 Iron-sulfur binding domain of endonuclease III IC774_15230 PF00730 HhH-GPD superfamily base excision DNA repair protein IC774_15240 PF05191 Adenylate kinase, active site lid IC774_15255 PF03717 Penicillin-binding Protein dimerisation domain IC774_15255 PF00905 Penicillin binding protein transpeptidase domain IC774_15275 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC774_15280 PF01730 UreF IC774_15285 PF05194 UreE urease accessory protein, C-terminal domain IC774_15285 PF02814 UreE urease accessory protein, N-terminal domain IC774_15290 PF01979 Amidohydrolase family IC774_15290 PF00449 Urease alpha-subunit, N-terminal domain IC774_15295 PF00699 Urease beta subunit IC774_15300 PF00547 Urease, gamma subunit IC774_15320 PF00463 Isocitrate lyase family IC774_15325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_15325 PF03466 LysR substrate binding domain IC774_15330 PF01595 Cyclin M transmembrane N-terminal domain IC774_15330 PF03471 Transporter associated domain IC774_15330 PF00571 CBS domain IC774_15340 PF03600 Citrate transporter IC774_15355 PF00009 Elongation factor Tu GTP binding domain IC774_15360 PF01507 Phosphoadenosine phosphosulfate reductase family IC774_15370 PF14052 Capsule assembly protein Wzi IC774_15375 PF00152 tRNA synthetases class II (D, K and N) IC774_15375 PF01336 OB-fold nucleic acid binding domain IC774_15390 PF00301 Rubredoxin IC774_15395 PF18113 Rubredoxin binding C-terminal domain IC774_15395 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_15400 PF00561 alpha/beta hydrolase fold IC774_15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_15405 PF03466 LysR substrate binding domain IC774_15415 PF13089 Polyphosphate kinase N-terminal domain IC774_15415 PF13090 Polyphosphate kinase C-terminal domain 2 IC774_15415 PF02503 Polyphosphate kinase middle domain IC774_15415 PF17941 Polyphosphate kinase C-terminal domain 1 IC774_15420 PF00912 Transglycosylase IC774_15425 PF01694 Rhomboid family IC774_15435 PF00005 ABC transporter IC774_15440 PF13472 GDSL-like Lipase/Acylhydrolase family IC774_15445 PF00484 Carbonic anhydrase IC774_15460 PF00593 TonB dependent receptor IC774_15460 PF07715 TonB-dependent Receptor Plug Domain IC774_15465 PF01521 Iron-sulphur cluster biosynthesis IC774_15465 PF01106 NifU-like domain IC774_15475 PF00884 Sulfatase IC774_15480 PF03781 Sulfatase-modifying factor enzyme 1 IC774_15495 PF00291 Pyridoxal-phosphate dependent enzyme IC774_15500 PF01384 Phosphate transporter family IC774_15510 PF02310 B12 binding domain IC774_15510 PF02607 B12 binding domain IC774_15510 PF02965 Vitamin B12 dependent methionine synthase, activation domain IC774_15510 PF00809 Pterin binding enzyme IC774_15510 PF02574 Homocysteine S-methyltransferase IC774_15530 PF01263 Aldose 1-epimerase IC774_15535 PF07690 Major Facilitator Superfamily IC774_15540 PF12833 Helix-turn-helix domain IC774_15540 PF02311 AraC-like ligand binding domain IC774_15545 PF04960 Glutaminase IC774_15550 PF01327 Polypeptide deformylase IC774_15565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC774_15565 PF00205 Thiamine pyrophosphate enzyme, central domain IC774_15565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC774_15570 PF00171 Aldehyde dehydrogenase family IC774_15575 PF01958 Domain of unknown function DUF108 IC774_15575 PF03447 Homoserine dehydrogenase, NAD binding domain IC774_15585 PF12697 Alpha/beta hydrolase family IC774_15600 PF14759 Reductase C-terminal IC774_15600 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_15605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC774_15615 PF00355 Rieske [2Fe-2S] domain IC774_15625 PF00355 Rieske [2Fe-2S] domain IC774_15630 PF01614 Bacterial transcriptional regulator IC774_15630 PF09339 IclR helix-turn-helix domain IC774_15660 PF00378 Enoyl-CoA hydratase/isomerase IC774_15670 PF00535 Glycosyl transferase family 2 IC774_15675 PF01522 Polysaccharide deacetylase IC774_15675 PF14883 Hypothetical glycosyl hydrolase family 13 IC774_15680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC774_15685 PF07152 YaeQ protein IC774_15690 PF00375 Sodium:dicarboxylate symporter family IC774_15695 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC774_15695 PF07683 Cobalamin synthesis protein cobW C-terminal domain IC774_15705 PF03061 Thioesterase superfamily IC774_15715 PF02028 BCCT, betaine/carnitine/choline family transporter IC774_15720 PF02028 BCCT, betaine/carnitine/choline family transporter IC774_15730 PF00171 Aldehyde dehydrogenase family IC774_15735 PF05199 GMC oxidoreductase IC774_15735 PF00732 GMC oxidoreductase IC774_15740 PF06039 Malate:quinone oxidoreductase (Mqo) IC774_15750 PF02574 Homocysteine S-methyltransferase IC774_15755 PF13520 Amino acid permease IC774_15775 PF00701 Dihydrodipicolinate synthetase family IC774_15780 PF00083 Sugar (and other) transporter IC774_15810 PF13936 Helix-turn-helix domain IC774_15810 PF00665 Integrase core domain IC774_15820 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IC774_15820 PF12008 Type I restriction and modification enzyme - subunit R C terminal IC774_15820 PF18766 SWI2/SNF2 ATPase IC774_15850 PF02384 N-6 DNA Methylase IC774_15850 PF12161 HsdM N-terminal domain IC774_15890 PF00665 Integrase core domain IC774_15890 PF13936 Helix-turn-helix domain IC774_15900 PF07690 Major Facilitator Superfamily IC774_15905 PF13533 Biotin-lipoyl like IC774_15910 PF03061 Thioesterase superfamily IC774_15915 PF00490 Delta-aminolevulinic acid dehydratase IC774_15920 PF01266 FAD dependent oxidoreductase IC774_15925 PF01370 NAD dependent epimerase/dehydratase family IC774_15925 PF08338 Domain of unknown function (DUF1731) IC774_15945 PF12320 Type 5 capsule protein repressor C-terminal domain IC774_15945 PF00149 Calcineurin-like phosphoesterase IC774_15965 PF13817 IS66 C-terminal element IC774_15965 PF13007 Transposase C of IS166 homeodomain IC774_15965 PF13005 zinc-finger binding domain of transposase IS66 IC774_15965 PF03050 Transposase IS66 family IC774_15970 PF02673 Bacitracin resistance protein BacA IC774_15975 PF01168 Alanine racemase, N-terminal domain IC774_15980 PF00437 Type II/IV secretion system protein IC774_15990 PF01475 Ferric uptake regulator family IC774_15995 PF04355 SmpA / OmlA family IC774_16000 PF03658 RnfH family Ubiquitin IC774_16010 PF01814 Hemerythrin HHE cation binding domain IC774_16015 PF13230 Glutamine amidotransferases class-II IC774_16025 PF00696 Amino acid kinase family IC774_16030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC774_16030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC774_16030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC774_16030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC774_16035 PF00692 dUTPase IC774_16040 PF00580 UvrD/REP helicase N-terminal domain IC774_16040 PF13361 UvrD-like helicase C-terminal domain IC774_16045 PF13488 Glycine zipper IC774_16045 PF00691 OmpA family IC774_16050 PF01553 Acyltransferase IC774_16060 PF03775 Septum formation inhibitor MinC, C-terminal domain IC774_16065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IC774_16070 PF03776 Septum formation topological specificity factor MinE IC774_16080 PF01810 LysE type translocator IC774_16085 PF17854 FtsK alpha domain IC774_16085 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IC774_16085 PF01580 FtsK/SpoIIIE family IC774_16085 PF09397 Ftsk gamma domain IC774_16090 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_16095 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IC774_16100 PF04377 Arginine-tRNA-protein transferase, C terminus IC774_16100 PF04376 Arginine-tRNA-protein transferase, N terminus IC774_16105 PF00583 Acetyltransferase (GNAT) family IC774_16120 PF00009 Elongation factor Tu GTP binding domain IC774_16120 PF03143 Elongation factor Tu C-terminal domain IC774_16120 PF03144 Elongation factor Tu domain 2 IC774_16125 PF03764 Elongation factor G, domain IV IC774_16125 PF00679 Elongation factor G C-terminus IC774_16125 PF00009 Elongation factor Tu GTP binding domain IC774_16125 PF03144 Elongation factor Tu domain 2 IC774_16125 PF14492 Elongation Factor G, domain II IC774_16130 PF00177 Ribosomal protein S7p/S5e IC774_16135 PF00164 Ribosomal protein S12/S23 IC774_16145 PF00109 Beta-ketoacyl synthase, N-terminal domain IC774_16145 PF02801 Beta-ketoacyl synthase, C-terminal domain IC774_16150 PF03653 Uncharacterised protein family (UPF0093) IC774_16175 PF00111 2Fe-2S iron-sulfur cluster binding domain IC774_16175 PF00970 Oxidoreductase FAD-binding domain IC774_16175 PF00175 Oxidoreductase NAD-binding domain IC774_16180 PF00171 Aldehyde dehydrogenase family IC774_16185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC774_16185 PF00355 Rieske [2Fe-2S] domain IC774_16190 PF07859 alpha/beta hydrolase fold IC774_16195 PF02028 BCCT, betaine/carnitine/choline family transporter IC774_16200 PF00180 Isocitrate/isopropylmalate dehydrogenase IC774_16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_16205 PF03466 LysR substrate binding domain IC774_16225 PF00037 4Fe-4S binding domain IC774_16230 PF01467 Cytidylyltransferase-like IC774_16235 PF01668 SmpB protein IC774_16240 PF03358 NADPH-dependent FMN reductase IC774_16245 PF02578 Multi-copper polyphenol oxidoreductase laccase IC774_16250 PF00849 RNA pseudouridylate synthase IC774_16250 PF01479 S4 domain IC774_16260 PF01807 CHC2 zinc finger IC774_16260 PF08275 DNA primase catalytic core, N-terminal domain IC774_16260 PF08278 DNA primase DnaG DnaB-binding IC774_16260 PF10410 DnaB-helicase binding domain of primase IC774_16265 PF01488 Shikimate / quinate 5-dehydrogenase IC774_16265 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IC774_16265 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IC774_16275 PF03550 Outer membrane lipoprotein LolB IC774_16280 PF08544 GHMP kinases C terminal IC774_16280 PF00288 GHMP kinases N terminal domain IC774_16305 PF14572 Phosphoribosyl synthetase-associated domain IC774_16305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IC774_16310 PF01386 Ribosomal L25p family IC774_16315 PF01195 Peptidyl-tRNA hydrolase IC774_16320 PF02261 Aspartate decarboxylase IC774_16335 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IC774_16345 PF02581 Thiamine monophosphate synthase IC774_16345 PF08543 Phosphomethylpyrimidine kinase IC774_16345 PF03070 TENA/THI-4/PQQC family IC774_16350 PF01476 LysM domain IC774_16350 PF04972 BON domain IC774_16355 PF00550 Phosphopantetheine attachment site IC774_16370 PF01783 Ribosomal L32p protein family IC774_16375 PF02620 Large ribosomal RNA subunit accumulation protein YceD IC774_16380 PF04315 Elongation factor P hydroxylase IC774_16390 PF02616 Segregation and condensation protein ScpA IC774_16395 PF04079 Segregation and condensation complex subunit ScpB IC774_16400 PF01479 S4 domain IC774_16400 PF00849 RNA pseudouridylate synthase IC774_16415 PF00155 Aminotransferase class I and II IC774_16420 PF00202 Aminotransferase class-III IC774_16420 PF06968 Biotin and Thiamin Synthesis associated domain IC774_16420 PF04055 Radical SAM superfamily IC774_16425 PF08241 Methyltransferase domain IC774_16425 PF12697 Alpha/beta hydrolase family IC774_16430 PF02358 Trehalose-phosphatase IC774_16435 PF00982 Glycosyltransferase family 20 IC774_16440 PF07690 Major Facilitator Superfamily IC774_16445 PF00210 Ferritin-like domain IC774_16450 PF00533 BRCA1 C Terminus (BRCT) domain IC774_16450 PF01653 NAD-dependent DNA ligase adenylation domain IC774_16450 PF03120 NAD-dependent DNA ligase OB-fold domain IC774_16450 PF12826 Helix-hairpin-helix motif IC774_16450 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IC774_16460 PF06470 SMC proteins Flexible Hinge Domain IC774_16460 PF02463 RecF/RecN/SMC N terminal domain IC774_16470 PF01925 Sulfite exporter TauE/SafE IC774_16480 PF03309 Type III pantothenate kinase IC774_16485 PF02978 Signal peptide binding domain IC774_16485 PF00448 SRP54-type protein, GTPase domain IC774_16485 PF02881 SRP54-type protein, helical bundle domain IC774_16495 PF01207 Dihydrouridine synthase (Dus) IC774_16525 PF00692 dUTPase IC774_16540 PF01048 Phosphorylase superfamily IC774_16545 PF10609 NUBPL iron-transfer P-loop NTPase IC774_16555 PF09334 tRNA synthetases class I (M) IC774_16555 PF01588 Putative tRNA binding domain IC774_16585 PF13533 Biotin-lipoyl like IC774_16590 PF00291 Pyridoxal-phosphate dependent enzyme IC774_16605 PF05552 Conserved TM helix IC774_16620 PF00970 Oxidoreductase FAD-binding domain IC774_16620 PF00175 Oxidoreductase NAD-binding domain IC774_16625 PF03466 LysR substrate binding domain IC774_16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_16635 PF00313 'Cold-shock' DNA-binding domain IC774_16645 PF00361 Proton-conducting membrane transporter IC774_16650 PF00361 Proton-conducting membrane transporter IC774_16655 PF00361 Proton-conducting membrane transporter IC774_16655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IC774_16660 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IC774_16665 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IC774_16670 PF12838 4Fe-4S dicluster domain IC774_16675 PF00146 NADH dehydrogenase IC774_16680 PF00384 Molybdopterin oxidoreductase IC774_16680 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IC774_16680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IC774_16685 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IC774_16685 PF10531 SLBB domain IC774_16685 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IC774_16695 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IC774_16695 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IC774_16700 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IC774_16705 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IC774_16710 PF00990 Diguanylate cyclase, GGDEF domain IC774_16710 PF17158 Membrane-associated sensor, integral membrane domain IC774_16725 PF00072 Response regulator receiver domain IC774_16725 PF00486 Transcriptional regulatory protein, C terminal IC774_16735 PF03477 ATP cone domain IC774_16735 PF02867 Ribonucleotide reductase, barrel domain IC774_16735 PF00317 Ribonucleotide reductase, all-alpha domain IC774_16745 PF00268 Ribonucleotide reductase, small chain IC774_16760 PF00155 Aminotransferase class I and II IC774_16775 PF03969 AFG1-like ATPase IC774_16780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_16780 PF03466 LysR substrate binding domain IC774_16795 PF17074 Darcynin, domain of unknown function IC774_16830 PF01613 Flavin reductase like domain IC774_16835 PF08267 Cobalamin-independent synthase, N-terminal domain IC774_16835 PF01717 Cobalamin-independent synthase, Catalytic domain IC774_16845 PF03466 LysR substrate binding domain IC774_16845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_16850 PF01810 LysE type translocator IC774_16855 PF03466 LysR substrate binding domain IC774_16855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_16860 PF07690 Major Facilitator Superfamily IC774_16875 PF00890 FAD binding domain IC774_16875 PF14537 Cytochrome c3 IC774_16890 PF17932 Tetracyclin repressor-like, C-terminal domain IC774_16890 PF00440 Bacterial regulatory proteins, tetR family IC774_16900 PF02515 CoA-transferase family III IC774_16905 PF07690 Major Facilitator Superfamily IC774_16910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_16910 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_16910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_16915 PF03466 LysR substrate binding domain IC774_16915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_16920 PF00107 Zinc-binding dehydrogenase IC774_16920 PF08240 Alcohol dehydrogenase GroES-like domain IC774_16925 PF00962 Adenosine/AMP deaminase IC774_16950 PF02445 Quinolinate synthetase A protein IC774_16955 PF01960 ArgJ family IC774_16960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IC774_16960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IC774_16965 PF00893 Small Multidrug Resistance protein IC774_16995 PF00834 Ribulose-phosphate 3 epimerase family IC774_17005 PF00756 Putative esterase IC774_17015 PF04445 Putative SAM-dependent methyltransferase IC774_17020 PF00814 Glycoprotease family IC774_17025 PF00132 Bacterial transferase hexapeptide (six repeats) IC774_17030 PF00293 NUDIX domain IC774_17070 PF00425 chorismate binding enzyme IC774_17070 PF04715 Anthranilate synthase component I, N terminal region IC774_17075 PF00155 Aminotransferase class I and II IC774_17080 PF00815 Histidinol dehydrogenase IC774_17085 PF01634 ATP phosphoribosyltransferase IC774_17090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IC774_17095 PF01722 BolA-like protein IC774_17100 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IC774_17150 PF00795 Carbon-nitrogen hydrolase IC774_17160 PF01047 MarR family IC774_17165 PF02566 OsmC-like protein IC774_17170 PF00437 Type II/IV secretion system protein IC774_17195 PF02325 YGGT family IC774_17200 PF03807 NADP oxidoreductase coenzyme F420-dependent IC774_17200 PF14748 Pyrroline-5-carboxylate reductase dimerisation IC774_17205 PF09179 TilS substrate binding domain IC774_17205 PF11734 TilS substrate C-terminal domain IC774_17205 PF01171 PP-loop family IC774_17210 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IC774_17215 PF02541 Ppx/GppA phosphatase family IC774_17220 PF00085 Thioredoxin IC774_17225 PF07497 Rho termination factor, RNA-binding domain IC774_17225 PF07498 Rho termination factor, N-terminal domain IC774_17225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC774_17240 PF00216 Bacterial DNA-binding protein IC774_17270 PF00453 Ribosomal protein L20 IC774_17275 PF01632 Ribosomal protein L35 IC774_17280 PF07690 Major Facilitator Superfamily IC774_17285 PF09335 SNARE associated Golgi protein IC774_17290 PF00043 Glutathione S-transferase, C-terminal domain IC774_17290 PF02798 Glutathione S-transferase, N-terminal domain IC774_17295 PF00707 Translation initiation factor IF-3, C-terminal domain IC774_17295 PF05198 Translation initiation factor IF-3, N-terminal domain IC774_17300 PF03129 Anticodon binding domain IC774_17300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC774_17300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IC774_17300 PF02824 TGS domain IC774_17305 PF13193 AMP-binding enzyme C-terminal domain IC774_17305 PF00501 AMP-binding enzyme IC774_17310 PF04751 Protein of unknown function (DUF615) IC774_17315 PF00381 PTS HPr component phosphorylation site IC774_17320 PF03668 P-loop ATPase protein family IC774_17325 PF02569 Pantoate-beta-alanine ligase IC774_17330 PF02548 Ketopantoate hydroxymethyltransferase IC774_17335 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IC774_17340 PF12627 Probable RNA and SrmB- binding site of polymerase A IC774_17340 PF12626 Polymerase A arginine-rich C-terminus IC774_17340 PF01743 Poly A polymerase head domain IC774_17350 PF03819 MazG nucleotide pyrophosphohydrolase domain IC774_17360 PF02824 TGS domain IC774_17360 PF04607 Region found in RelA / SpoT proteins IC774_17360 PF13291 ACT domain IC774_17375 PF00291 Pyridoxal-phosphate dependent enzyme IC774_17380 PF00072 Response regulator receiver domain IC774_17380 PF00512 His Kinase A (phospho-acceptor) domain IC774_17380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IC774_17380 PF00672 HAMP domain IC774_17380 PF01627 Hpt domain IC774_17380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_17385 PF00378 Enoyl-CoA hydratase/isomerase IC774_17390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IC774_17390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IC774_17395 PF01261 Xylose isomerase-like TIM barrel IC774_17410 PF00106 short chain dehydrogenase IC774_17415 PF02233 NAD(P) transhydrogenase beta subunit IC774_17420 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IC774_17425 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IC774_17425 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IC774_17430 PF00892 EamA-like transporter family IC774_17440 PF07690 Major Facilitator Superfamily IC774_17455 PF09828 Chromate resistance exported protein IC774_17460 PF02417 Chromate transporter IC774_17465 PF01545 Cation efflux family IC774_17480 PF07690 Major Facilitator Superfamily IC774_17500 PF00873 AcrB/AcrD/AcrF family IC774_17505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC774_17505 PF00529 HlyD membrane-fusion protein of T1SS IC774_17590 PF00589 Phage integrase family IC774_17595 PF01207 Dihydrouridine synthase (Dus) IC774_17605 PF03466 LysR substrate binding domain IC774_17605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_17615 PF00899 ThiF family IC774_17625 PF01026 TatD related DNase IC774_17640 PF16658 Class II release factor RF3, C-terminal domain IC774_17640 PF03144 Elongation factor Tu domain 2 IC774_17640 PF00009 Elongation factor Tu GTP binding domain IC774_17675 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IC774_17675 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IC774_17680 PF10369 Small subunit of acetolactate synthase IC774_17685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC774_17685 PF00205 Thiamine pyrophosphate enzyme, central domain IC774_17685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC774_17695 PF08264 Anticodon-binding domain of tRNA IC774_17695 PF00133 tRNA synthetases class I (I, L, M and V) IC774_17695 PF09334 tRNA synthetases class I (M) IC774_17695 PF13603 Leucyl-tRNA synthetase, Domain 2 IC774_17710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC774_17715 PF12704 MacB-like periplasmic core domain IC774_17715 PF02687 FtsX-like permease family IC774_17715 PF00005 ABC transporter IC774_17720 PF02321 Outer membrane efflux protein IC774_17735 PF00929 Exonuclease IC774_17740 PF03193 RsgA GTPase IC774_17750 PF00462 Glutaredoxin IC774_17755 PF02556 Preprotein translocase subunit SecB IC774_17765 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IC774_17765 PF01926 50S ribosome-binding GTPase IC774_17770 PF13360 PQQ-like domain IC774_17780 PF13393 Histidyl-tRNA synthetase IC774_17780 PF03129 Anticodon binding domain IC774_17785 PF04551 GcpE protein IC774_17790 PF13464 Domain of unknown function (DUF4115) IC774_17800 PF04055 Radical SAM superfamily IC774_17805 PF00334 Nucleoside diphosphate kinase IC774_17810 PF04384 Iron-sulphur cluster assembly IC774_17820 PF13439 Glycosyltransferase Family 4 IC774_17820 PF00534 Glycosyl transferases group 1 IC774_17825 PF17804 Tail specific protease N-terminal domain IC774_17825 PF03572 Peptidase family S41 IC774_17825 PF00595 PDZ domain IC774_17825 PF11818 C-terminal domain of tail specific protease (DUF3340) IC774_17830 PF00933 Glycosyl hydrolase family 3 N terminal domain IC774_17845 PF00171 Aldehyde dehydrogenase family IC774_17855 PF01202 Shikimate kinase IC774_17860 PF02447 GntP family permease IC774_17865 PF01081 KDPG and KHG aldolase IC774_17875 PF00871 Acetokinase family IC774_17880 PF07085 DRTGG domain IC774_17880 PF01515 Phosphate acetyl/butaryl transferase IC774_17885 PF05681 Fumarate hydratase (Fumerase) IC774_17885 PF05683 Fumarase C-terminus IC774_17905 PF00574 Clp protease IC774_17910 PF05697 Bacterial trigger factor protein (TF) IC774_17910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC774_17910 PF05698 Bacterial trigger factor protein (TF) C-terminus IC774_17915 PF07715 TonB-dependent Receptor Plug Domain IC774_17915 PF00593 TonB dependent receptor IC774_17925 PF08502 LeuA allosteric (dimerisation) domain IC774_17925 PF00682 HMGL-like IC774_17930 PF00561 alpha/beta hydrolase fold IC774_17935 PF07021 Methionine biosynthesis protein MetW IC774_17935 PF00561 alpha/beta hydrolase fold IC774_17945 PF01725 Ham1 family IC774_17955 PF02416 mttA/Hcf106 family IC774_17960 PF02416 mttA/Hcf106 family IC774_17965 PF00902 Sec-independent protein translocase protein (TatC) IC774_17980 PF01790 Prolipoprotein diacylglyceryl transferase IC774_18000 PF00186 Dihydrofolate reductase IC774_18010 PF01625 Peptide methionine sulfoxide reductase IC774_18015 PF02472 Biopolymer transport protein ExbD/TolR IC774_18020 PF01618 MotA/TolQ/ExbB proton channel family IC774_18030 PF00551 Formyl transferase IC774_18030 PF01842 ACT domain IC774_18040 PF00171 Aldehyde dehydrogenase family IC774_18045 PF00830 Ribosomal L28 family IC774_18050 PF00471 Ribosomal protein L33 IC774_18055 PF02254 TrkA-N domain IC774_18055 PF00999 Sodium/hydrogen exchanger family IC774_18075 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IC774_18080 PF13361 UvrD-like helicase C-terminal domain IC774_18080 PF00580 UvrD/REP helicase N-terminal domain IC774_18095 PF01131 DNA topoisomerase IC774_18095 PF01396 Topoisomerase DNA binding C4 zinc finger IC774_18095 PF01751 Toprim domain IC774_18095 PF08272 Topoisomerase I zinc-ribbon-like IC774_18105 PF01638 HxlR-like helix-turn-helix IC774_18110 PF00107 Zinc-binding dehydrogenase IC774_18110 PF08240 Alcohol dehydrogenase GroES-like domain IC774_18115 PF04102 SlyX IC774_18120 PF00005 ABC transporter IC774_18120 PF16326 ABC transporter C-terminal domain IC774_18120 PF12848 ABC transporter IC774_18130 PF01810 LysE type translocator IC774_18135 PF03279 Bacterial lipid A biosynthesis acyltransferase IC774_18145 PF00375 Sodium:dicarboxylate symporter family IC774_18155 PF01118 Semialdehyde dehydrogenase, NAD binding domain IC774_18155 PF02774 Semialdehyde dehydrogenase, dimerisation domain IC774_18175 PF01416 tRNA pseudouridine synthase IC774_18185 PF01176 Translation initiation factor 1A / IF-1 IC774_18200 PF00180 Isocitrate/isopropylmalate dehydrogenase IC774_18210 PF00694 Aconitase C-terminal domain IC774_18215 PF00330 Aconitase family (aconitate hydratase) IC774_18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_18225 PF03466 LysR substrate binding domain IC774_18250 PF00293 NUDIX domain IC774_18255 PF01590 GAF domain IC774_18255 PF00391 PEP-utilising enzyme, mobile domain IC774_18255 PF05524 PEP-utilising enzyme, N-terminal IC774_18255 PF02896 PEP-utilising enzyme, TIM barrel domain IC774_18260 PF00141 Peroxidase IC774_18265 PF12706 Beta-lactamase superfamily domain IC774_18270 PF03466 LysR substrate binding domain IC774_18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_18280 PF02798 Glutathione S-transferase, N-terminal domain IC774_18285 PF08279 HTH domain IC774_18285 PF13280 WYL domain IC774_18295 PF00849 RNA pseudouridylate synthase IC774_18295 PF01479 S4 domain IC774_18300 PF00575 S1 RNA binding domain IC774_18300 PF12111 Polyribonucleotide phosphorylase C terminal IC774_18300 PF10150 Ribonuclease E/G family IC774_18305 PF13193 AMP-binding enzyme C-terminal domain IC774_18305 PF00501 AMP-binding enzyme IC774_18320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_18320 PF03466 LysR substrate binding domain IC774_18325 PF00106 short chain dehydrogenase IC774_18330 PF06969 HemN C-terminal domain IC774_18330 PF04055 Radical SAM superfamily IC774_18340 PF01554 MatE IC774_18345 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC774_18345 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_18345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_18350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_18350 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC774_18355 PF03109 ABC1 family IC774_18360 PF01197 Ribosomal protein L31 IC774_18375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IC774_18385 PF13247 4Fe-4S dicluster domain IC774_18385 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_18385 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IC774_18395 PF03884 DNA gyrase inhibitor YacG IC774_18400 PF00753 Metallo-beta-lactamase superfamily IC774_18405 PF00762 Ferrochelatase IC774_18415 PF01177 Asp/Glu/Hydantoin racemase IC774_18435 PF01206 Sulfurtransferase TusA IC774_18440 PF03471 Transporter associated domain IC774_18440 PF00571 CBS domain IC774_18445 PF00795 Carbon-nitrogen hydrolase IC774_18450 PF01588 Putative tRNA binding domain IC774_18465 PF08334 Type II secretion system (T2SS), protein G IC774_18465 PF07963 Prokaryotic N-terminal methylation motif IC774_18470 PF00482 Type II secretion system (T2SS), protein F IC774_18475 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IC774_18475 PF18074 Primosomal protein N C-terminal domain IC774_18475 PF17764 3′ DNA-binding domain (3′BD) IC774_18475 PF00270 DEAD/DEAH box helicase IC774_18475 PF00271 Helicase conserved C-terminal domain IC774_18480 PF00999 Sodium/hydrogen exchanger family IC774_18480 PF02254 TrkA-N domain IC774_18485 PF01430 Hsp33 protein IC774_18505 PF01544 CorA-like Mg2+ transporter protein IC774_18510 PF01138 3' exoribonuclease family, domain 1 IC774_18510 PF00013 KH domain IC774_18510 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IC774_18510 PF00575 S1 RNA binding domain IC774_18510 PF03725 3' exoribonuclease family, domain 2 IC774_18515 PF00312 Ribosomal protein S15 IC774_18520 PF00144 Beta-lactamase IC774_18525 PF13538 UvrD-like helicase C-terminal domain IC774_18530 PF13361 UvrD-like helicase C-terminal domain IC774_18530 PF00580 UvrD/REP helicase N-terminal domain IC774_18530 PF12705 PD-(D/E)XK nuclease superfamily IC774_18535 PF17946 RecC C-terminal domain IC774_18550 PF03976 Polyphosphate kinase 2 (PPK2) IC774_18560 PF01209 ubiE/COQ5 methyltransferase family IC774_18570 PF03109 ABC1 family IC774_18575 PF01494 FAD binding domain IC774_18580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC774_18590 PF01502 Phosphoribosyl-AMP cyclohydrolase IC774_18605 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IC774_18605 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IC774_18605 PF13244 Domain of unknown function (DUF4040) IC774_18605 PF00361 Proton-conducting membrane transporter IC774_18610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IC774_18615 PF00361 Proton-conducting membrane transporter IC774_18620 PF01899 Na+/H+ ion antiporter subunit IC774_18625 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IC774_18630 PF03334 Na+/H+ antiporter subunit IC774_18635 PF02033 Ribosome-binding factor A IC774_18650 PF02576 RimP N-terminal domain IC774_18650 PF17384 RimP C-terminal SH3 domain IC774_18670 PF03840 Preprotein translocase SecG subunit IC774_18675 PF00121 Triosephosphate isomerase IC774_18680 PF00437 Type II/IV secretion system protein IC774_18680 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IC774_18685 PF00482 Type II secretion system (T2SS), protein F IC774_18690 PF06750 Bacterial Peptidase A24 N-terminal domain IC774_18690 PF01478 Type IV leader peptidase family IC774_18695 PF01121 Dephospho-CoA kinase IC774_18705 PF00588 SpoU rRNA Methylase family IC774_18705 PF08032 RNA 2'-O ribose methyltransferase substrate binding IC774_18710 PF06865 Pyrimidine/purine nucleoside phosphorylase IC774_18715 PF02463 RecF/RecN/SMC N terminal domain IC774_18720 PF02622 Uncharacterized ACR, COG1678 IC774_18725 PF03652 Holliday junction resolvase IC774_18730 PF13533 Biotin-lipoyl like IC774_18740 PF04632 Fusaric acid resistance protein family IC774_18755 PF01066 CDP-alcohol phosphatidyltransferase IC774_18765 PF08459 UvrC Helix-hairpin-helix N-terminal IC774_18765 PF01541 GIY-YIG catalytic domain IC774_18765 PF02151 UvrB/uvrC motif IC774_18785 PF00378 Enoyl-CoA hydratase/isomerase IC774_18785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC774_18785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC774_18790 PF00108 Thiolase, N-terminal domain IC774_18790 PF02803 Thiolase, C-terminal domain IC774_18805 PF09278 MerR, DNA binding IC774_18805 PF00376 MerR family regulatory protein IC774_18815 PF01323 DSBA-like thioredoxin domain IC774_18830 PF00183 Hsp90 protein IC774_18830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_18845 PF03553 Na+/H+ antiporter family IC774_18845 PF13726 Na+-H+ antiporter family IC774_18850 PF00561 alpha/beta hydrolase fold IC774_18870 PF04983 RNA polymerase Rpb1, domain 3 IC774_18870 PF05000 RNA polymerase Rpb1, domain 4 IC774_18870 PF04997 RNA polymerase Rpb1, domain 1 IC774_18870 PF00623 RNA polymerase Rpb1, domain 2 IC774_18870 PF04998 RNA polymerase Rpb1, domain 5 IC774_18875 PF04563 RNA polymerase beta subunit IC774_18875 PF10385 RNA polymerase beta subunit external 1 domain IC774_18875 PF04565 RNA polymerase Rpb2, domain 3 IC774_18875 PF00562 RNA polymerase Rpb2, domain 6 IC774_18875 PF04560 RNA polymerase Rpb2, domain 7 IC774_18875 PF04561 RNA polymerase Rpb2, domain 2 IC774_18880 PF00542 Ribosomal protein L7/L12 C-terminal domain IC774_18880 PF16320 Ribosomal protein L7/L12 dimerisation domain IC774_18885 PF00466 Ribosomal protein L10 IC774_18890 PF00687 Ribosomal protein L1p/L10e family IC774_18895 PF03946 Ribosomal protein L11, N-terminal domain IC774_18895 PF00298 Ribosomal protein L11, RNA binding domain IC774_18900 PF02357 Transcription termination factor nusG IC774_18900 PF00467 KOW motif IC774_18905 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IC774_18915 PF00009 Elongation factor Tu GTP binding domain IC774_18915 PF03144 Elongation factor Tu domain 2 IC774_18915 PF03143 Elongation factor Tu C-terminal domain IC774_18940 PF04715 Anthranilate synthase component I, N terminal region IC774_18940 PF00425 chorismate binding enzyme IC774_18945 PF13419 Haloacid dehalogenase-like hydrolase IC774_18950 PF12401 Protein of unknown function (DUF2662) IC774_18950 PF00498 FHA domain IC774_18955 PF03958 Bacterial type II/III secretion system short domain IC774_18955 PF00263 Bacterial type II and III secretion system protein IC774_18970 PF00816 H-NS histone family IC774_18995 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IC774_18995 PF03900 Porphobilinogen deaminase, C-terminal domain IC774_19000 PF04397 LytTr DNA-binding domain IC774_19000 PF00072 Response regulator receiver domain IC774_19005 PF07694 5TMR of 5TMR-LYT IC774_19005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_19005 PF06580 Histidine kinase IC774_19015 PF04362 Bacterial Fe(2+) trafficking IC774_19020 PF01895 PhoU domain IC774_19025 PF02321 Outer membrane efflux protein IC774_19035 PF00892 EamA-like transporter family IC774_19050 PF01964 Radical SAM ThiC family IC774_19050 PF13667 ThiC-associated domain IC774_19055 PF13667 ThiC-associated domain IC774_19055 PF01964 Radical SAM ThiC family IC774_19060 PF00293 NUDIX domain IC774_19070 PF01258 Prokaryotic dksA/traR C4-type zinc finger IC774_19075 PF00749 tRNA synthetases class I (E and Q), catalytic domain IC774_19085 PF02875 Mur ligase family, glutamate ligase domain IC774_19085 PF08245 Mur ligase middle domain IC774_19095 PF02421 Ferrous iron transport protein B IC774_19095 PF07664 Ferrous iron transport protein B C terminus IC774_19095 PF07670 Nucleoside recognition IC774_19105 PF00589 Phage integrase family IC774_19105 PF02899 Phage integrase, N-terminal SAM-like domain IC774_19110 PF10411 Disulfide bond isomerase protein N-terminus IC774_19110 PF13098 Thioredoxin-like domain IC774_19115 PF03447 Homoserine dehydrogenase, NAD binding domain IC774_19115 PF00742 Homoserine dehydrogenase IC774_19115 PF01842 ACT domain IC774_19120 PF00291 Pyridoxal-phosphate dependent enzyme IC774_19125 PF00768 D-alanyl-D-alanine carboxypeptidase IC774_19130 PF00072 Response regulator receiver domain IC774_19130 PF00196 Bacterial regulatory proteins, luxR family IC774_19135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_19135 PF00512 His Kinase A (phospho-acceptor) domain IC774_19145 PF03572 Peptidase family S41 IC774_19145 PF00595 PDZ domain IC774_19150 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IC774_19150 PF01676 Metalloenzyme superfamily IC774_19155 PF03739 Lipopolysaccharide export system permease LptF/LptG IC774_19160 PF03739 Lipopolysaccharide export system permease LptF/LptG IC774_19165 PF02789 Cytosol aminopeptidase family, N-terminal domain IC774_19165 PF00883 Cytosol aminopeptidase family, catalytic domain IC774_19185 PF00677 Lumazine binding domain IC774_19195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IC774_19195 PF01872 RibD C-terminal domain IC774_19200 PF03477 ATP cone domain IC774_19205 PF00909 Ammonium Transporter Family IC774_19210 PF00543 Nitrogen regulatory protein P-II IC774_19220 PF01078 Magnesium chelatase, subunit ChlI IC774_19220 PF13335 Magnesium chelatase, subunit ChlI C-terminal IC774_19225 PF03358 NADPH-dependent FMN reductase IC774_19230 PF00392 Bacterial regulatory proteins, gntR family IC774_19230 PF00155 Aminotransferase class I and II IC774_19235 PF00596 Class II Aldolase and Adducin N-terminal domain IC774_19240 PF00701 Dihydrodipicolinate synthetase family IC774_19250 PF03573 outer membrane porin, OprD family IC774_19255 PF00719 Inorganic pyrophosphatase IC774_19270 PF13193 AMP-binding enzyme C-terminal domain IC774_19270 PF00501 AMP-binding enzyme IC774_19275 PF03989 DNA gyrase C-terminal domain, beta-propeller IC774_19275 PF00521 DNA gyrase/topoisomerase IV, subunit A IC774_19280 PF07690 Major Facilitator Superfamily IC774_19285 PF03458 UPF0126 domain IC774_19290 PF02810 SEC-C motif IC774_19295 PF03471 Transporter associated domain IC774_19295 PF03741 Integral membrane protein TerC family IC774_19300 PF03641 Possible lysine decarboxylase IC774_19305 PF07690 Major Facilitator Superfamily IC774_19315 PF00817 impB/mucB/samB family IC774_19315 PF11799 impB/mucB/samB family C-terminal domain IC774_19315 PF11798 IMS family HHH motif IC774_19330 PF11842 Domain of unknown function (DUF3362) IC774_19330 PF08497 Radical SAM N-terminal IC774_19330 PF04055 Radical SAM superfamily IC774_19350 PF03358 NADPH-dependent FMN reductase IC774_19365 PF00291 Pyridoxal-phosphate dependent enzyme IC774_19400 PF00440 Bacterial regulatory proteins, tetR family IC774_19425 PF01327 Polypeptide deformylase IC774_19435 PF02481 DNA recombination-mediator protein A IC774_19435 PF17782 DprA winged helix domain IC774_19440 PF01300 Telomere recombination IC774_19445 PF00892 EamA-like transporter family IC774_19450 PF00440 Bacterial regulatory proteins, tetR family IC774_19455 PF07690 Major Facilitator Superfamily IC774_19465 PF00255 Glutathione peroxidase IC774_19475 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IC774_19480 PF02874 ATP synthase alpha/beta family, beta-barrel domain IC774_19480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC774_19485 PF00231 ATP synthase IC774_19490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC774_19490 PF00306 ATP synthase alpha/beta chain, C terminal domain IC774_19490 PF02874 ATP synthase alpha/beta family, beta-barrel domain IC774_19495 PF00213 ATP synthase delta (OSCP) subunit IC774_19500 PF00430 ATP synthase B/B' CF(0) IC774_19505 PF00137 ATP synthase subunit C IC774_19510 PF00119 ATP synthase A chain IC774_19535 PF00950 ABC 3 transport family IC774_19540 PF01810 LysE type translocator IC774_19560 PF03949 Malic enzyme, NAD binding domain IC774_19560 PF00390 Malic enzyme, N-terminal domain IC774_19585 PF05726 Pirin C-terminal cupin domain IC774_19585 PF02678 Pirin IC774_19595 PF01475 Ferric uptake regulator family IC774_19600 PF03551 Transcriptional regulator PadR-like family IC774_19605 PF13302 Acetyltransferase (GNAT) domain IC774_19610 PF02540 NAD synthase IC774_19610 PF00958 GMP synthase C terminal domain IC774_19610 PF00117 Glutamine amidotransferase class-I IC774_19615 PF04286 Protein of unknown function (DUF445) IC774_19615 PF04286 Protein of unknown function (DUF445) IC774_19620 PF07681 DoxX IC774_19625 PF09335 SNARE associated Golgi protein IC774_19640 PF13614 AAA domain IC774_19650 PF01722 BolA-like protein IC774_19665 PF01648 4'-phosphopantetheinyl transferase superfamily IC774_19670 PF16363 GDP-mannose 4,6 dehydratase IC774_19685 PF00501 AMP-binding enzyme IC774_19685 PF13193 AMP-binding enzyme C-terminal domain IC774_19685 PF00668 Condensation domain IC774_19685 PF00975 Thioesterase domain IC774_19685 PF00550 Phosphopantetheine attachment site IC774_19690 PF02801 Beta-ketoacyl synthase, C-terminal domain IC774_19690 PF00109 Beta-ketoacyl synthase, N-terminal domain IC774_19690 PF16197 Ketoacyl-synthetase C-terminal extension IC774_19690 PF08242 Methyltransferase domain IC774_19690 PF00550 Phosphopantetheine attachment site IC774_19690 PF14765 Polyketide synthase dehydratase IC774_19690 PF00975 Thioesterase domain IC774_19695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_19695 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_19695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_19705 PF00196 Bacterial regulatory proteins, luxR family IC774_19705 PF03472 Autoinducer binding domain IC774_19715 PF00765 Autoinducer synthase IC774_19720 PF07690 Major Facilitator Superfamily IC774_19720 PF00083 Sugar (and other) transporter IC774_19725 PF00378 Enoyl-CoA hydratase/isomerase IC774_19730 PF00378 Enoyl-CoA hydratase/isomerase IC774_19735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC774_19735 PF02770 Acyl-CoA dehydrogenase, middle domain IC774_19735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC774_19740 PF13193 AMP-binding enzyme C-terminal domain IC774_19740 PF00501 AMP-binding enzyme IC774_19745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IC774_19745 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IC774_19750 PF00171 Aldehyde dehydrogenase family IC774_19760 PF00324 Amino acid permease IC774_19765 PF00324 Amino acid permease IC774_19770 PF01042 Endoribonuclease L-PSP IC774_19775 PF01168 Alanine racemase, N-terminal domain IC774_19775 PF00842 Alanine racemase, C-terminal domain IC774_19780 PF01266 FAD dependent oxidoreductase IC774_19785 PF01037 Lrp/AsnC ligand binding domain IC774_19795 PF00593 TonB dependent receptor IC774_19795 PF07715 TonB-dependent Receptor Plug Domain IC774_19810 PF00849 RNA pseudouridylate synthase IC774_19830 PF08361 MAATS-type transcriptional repressor, C-terminal region IC774_19830 PF00440 Bacterial regulatory proteins, tetR family IC774_19840 PF02801 Beta-ketoacyl synthase, C-terminal domain IC774_19840 PF00109 Beta-ketoacyl synthase, N-terminal domain IC774_19880 PF00694 Aconitase C-terminal domain IC774_19880 PF00330 Aconitase family (aconitate hydratase) IC774_19885 PF00285 Citrate synthase, C-terminal domain IC774_19895 PF00392 Bacterial regulatory proteins, gntR family IC774_19895 PF07729 FCD domain IC774_19910 PF01565 FAD binding domain IC774_19910 PF09330 D-lactate dehydrogenase, membrane binding IC774_19915 PF01070 FMN-dependent dehydrogenase IC774_19920 PF00392 Bacterial regulatory proteins, gntR family IC774_19920 PF07729 FCD domain IC774_19925 PF02652 L-lactate permease IC774_19930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC774_19930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC774_19930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC774_19930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC774_19940 PF00342 Phosphoglucose isomerase IC774_19945 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IC774_19945 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IC774_19945 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IC774_19955 PF02397 Bacterial sugar transferase IC774_19965 PF01370 NAD dependent epimerase/dehydratase family IC774_19970 PF00132 Bacterial transferase hexapeptide (six repeats) IC774_19975 PF00535 Glycosyl transferase family 2 IC774_20000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IC774_20015 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IC774_20020 PF00483 Nucleotidyl transferase IC774_20025 PF04321 RmlD substrate binding domain IC774_20040 PF02563 Polysaccharide biosynthesis/export protein IC774_20040 PF10531 SLBB domain IC774_20040 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IC774_20050 PF13807 G-rich domain on putative tyrosine kinase IC774_20050 PF02706 Chain length determinant protein IC774_20050 PF13614 AAA domain IC774_20055 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IC774_20055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC774_20060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC774_20060 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IC774_20065 PF03023 Lipid II flippase MurJ IC774_20070 PF01510 N-acetylmuramoyl-L-alanine amidase IC774_20075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IC774_20075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IC774_20085 PF05506 Domain of unknown function (DUF756) IC774_20085 PF04185 Phosphoesterase family IC774_20090 PF01138 3' exoribonuclease family, domain 1 IC774_20090 PF03725 3' exoribonuclease family, domain 2 IC774_20095 PF00487 Fatty acid desaturase IC774_20100 PF00175 Oxidoreductase NAD-binding domain IC774_20105 PF00440 Bacterial regulatory proteins, tetR family IC774_20110 PF08360 QacR-like protein, C-terminal region IC774_20110 PF00440 Bacterial regulatory proteins, tetR family IC774_20115 PF01323 DSBA-like thioredoxin domain IC774_20125 PF13419 Haloacid dehalogenase-like hydrolase IC774_20130 PF00106 short chain dehydrogenase IC774_20145 PF00696 Amino acid kinase family IC774_20145 PF00583 Acetyltransferase (GNAT) family IC774_20155 PF09084 NMT1/THI5 like IC774_20160 PF00296 Luciferase-like monooxygenase IC774_20165 PF00528 Binding-protein-dependent transport system inner membrane component IC774_20170 PF00005 ABC transporter IC774_20175 PF00440 Bacterial regulatory proteins, tetR family IC774_20175 PF08362 YcdC-like protein, C-terminal region IC774_20180 PF01048 Phosphorylase superfamily IC774_20190 PF06574 FAD synthetase IC774_20190 PF01687 Riboflavin kinase IC774_20195 PF08264 Anticodon-binding domain of tRNA IC774_20195 PF00133 tRNA synthetases class I (I, L, M and V) IC774_20195 PF06827 Zinc finger found in FPG and IleRS IC774_20200 PF01252 Signal peptidase (SPase) II IC774_20205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC774_20245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IC774_20250 PF07859 alpha/beta hydrolase fold IC774_20280 PF00012 Hsp70 protein IC774_20290 PF13936 Helix-turn-helix domain IC774_20290 PF00665 Integrase core domain IC774_20310 PF13406 Transglycosylase SLT domain IC774_20320 PF00731 AIR carboxylase IC774_20330 PF08245 Mur ligase middle domain IC774_20330 PF02875 Mur ligase family, glutamate ligase domain IC774_20330 PF01225 Mur ligase family, catalytic domain IC774_20340 PF01569 PAP2 superfamily IC774_20345 PF03741 Integral membrane protein TerC family IC774_20355 PF03738 Glutathionylspermidine synthase preATP-grasp IC774_20360 PF00355 Rieske [2Fe-2S] domain IC774_20365 PF01979 Amidohydrolase family IC774_20370 PF00156 Phosphoribosyl transferase domain IC774_20380 PF13098 Thioredoxin-like domain IC774_20380 PF10411 Disulfide bond isomerase protein N-terminus IC774_20390 PF10396 GTP-binding protein TrmE N-terminus IC774_20390 PF12631 MnmE helical domain IC774_20390 PF01926 50S ribosome-binding GTPase IC774_20395 PF02096 60Kd inner membrane protein IC774_20395 PF14849 YidC periplasmic domain IC774_20400 PF01809 Putative membrane protein insertion efficiency factor IC774_20405 PF00825 Ribonuclease P IC774_20410 PF00468 Ribosomal protein L34 IC774_20485 PF13737 Transposase DDE domain IC774_20550 PF01435 Peptidase family M48 IC774_20580 PF00665 Integrase core domain IC774_20590 PF13007 Transposase C of IS166 homeodomain IC774_20590 PF13005 zinc-finger binding domain of transposase IS66 IC774_20590 PF03050 Transposase IS66 family IC774_20590 PF13817 IS66 C-terminal element IC774_20615 PF00582 Universal stress protein family IC774_20620 PF01740 STAS domain IC774_20620 PF00916 Sulfate permease family IC774_20650 PF02899 Phage integrase, N-terminal SAM-like domain IC774_20650 PF00589 Phage integrase family IC774_20675 PF00665 Integrase core domain IC774_20690 PF00809 Pterin binding enzyme IC774_20705 PF07690 Major Facilitator Superfamily IC774_20710 PF00440 Bacterial regulatory proteins, tetR family IC774_20710 PF02909 Tetracyclin repressor-like, C-terminal domain IC774_20735 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase IC774_20740 PF01636 Phosphotransferase enzyme family IC774_20755 PF01396 Topoisomerase DNA binding C4 zinc finger IC774_20755 PF01751 Toprim domain IC774_20755 PF01131 DNA topoisomerase IC774_20830 PF00665 Integrase core domain IC774_20830 PF13936 Helix-turn-helix domain IC774_20835 PF01636 Phosphotransferase enzyme family IC774_20840 PF13936 Helix-turn-helix domain IC774_20840 PF00665 Integrase core domain IC774_20990 PF13614 AAA domain IC774_20995 PF17762 HTH domain found in ParB protein IC774_20995 PF02195 ParB-like nuclease domain IC774_21005 PF11798 IMS family HHH motif IC774_21005 PF00817 impB/mucB/samB family IC774_21005 PF11799 impB/mucB/samB family C-terminal domain IC774_21005 PF13438 Domain of unknown function (DUF4113) IC774_21010 PF00717 Peptidase S24-like IC774_21035 PF01551 Peptidase family M23 IC774_21035 PF04225 Opacity-associated protein A LysM-like domain IC774_21080 PF03203 MerC mercury resistance protein IC774_21085 PF00403 Heavy-metal-associated domain IC774_21090 PF02411 MerT mercuric transport protein IC774_21095 PF09278 MerR, DNA binding IC774_21095 PF00376 MerR family regulatory protein IC774_21100 PF13610 DDE domain IC774_21110 PF13411 MerR HTH family regulatory protein IC774_21125 PF02421 Ferrous iron transport protein B IC774_21125 PF07664 Ferrous iron transport protein B C terminus IC774_21125 PF07670 Nucleoside recognition IC774_21140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC774_21160 PF07731 Multicopper oxidase IC774_21160 PF00394 Multicopper oxidase IC774_21160 PF07732 Multicopper oxidase IC774_21170 PF00072 Response regulator receiver domain IC774_21170 PF00486 Transcriptional regulatory protein, C terminal IC774_21175 PF00672 HAMP domain IC774_21175 PF00512 His Kinase A (phospho-acceptor) domain IC774_21175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC774_21180 PF13194 Domain of unknown function (DUF4010) IC774_21230 PF00403 Heavy-metal-associated domain IC774_21240 PF02583 Metal-sensitive transcriptional repressor IC774_21250 PF13610 DDE domain IC774_21275 PF00580 UvrD/REP helicase N-terminal domain IC774_21275 PF13361 UvrD-like helicase C-terminal domain IC774_21305 PF13737 Transposase DDE domain IC774_21340 PF00589 Phage integrase family IC774_21340 PF13356 Arm DNA-binding domain IC774_21345 PF04151 Bacterial pre-peptidase C-terminal domain IC774_21355 PF16884 N-terminal domain of oxidoreductase IC774_21355 PF00107 Zinc-binding dehydrogenase IC774_21360 PF16925 Tetracyclin repressor-like, C-terminal domain IC774_21360 PF00440 Bacterial regulatory proteins, tetR family IC774_21370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC774_21380 PF00465 Iron-containing alcohol dehydrogenase IC774_21395 PF00756 Putative esterase IC774_21400 PF00107 Zinc-binding dehydrogenase IC774_21400 PF08240 Alcohol dehydrogenase GroES-like domain IC774_21405 PF02583 Metal-sensitive transcriptional repressor IC774_21415 PF01965 DJ-1/PfpI family IC774_21415 PF12833 Helix-turn-helix domain IC774_21420 PF00557 Metallopeptidase family M24 IC774_21420 PF01321 Creatinase/Prolidase N-terminal domain IC774_21425 PF08946 Osmosensory transporter coiled coil IC774_21425 PF00083 Sugar (and other) transporter IC774_21430 PF00892 EamA-like transporter family IC774_21440 PF00550 Phosphopantetheine attachment site IC774_21440 PF02801 Beta-ketoacyl synthase, C-terminal domain IC774_21440 PF00109 Beta-ketoacyl synthase, N-terminal domain IC774_21440 PF16197 Ketoacyl-synthetase C-terminal extension IC774_21440 PF08240 Alcohol dehydrogenase GroES-like domain IC774_21440 PF00698 Acyl transferase domain IC774_21440 PF08659 KR domain IC774_21440 PF14765 Polyketide synthase dehydratase IC774_21445 PF08240 Alcohol dehydrogenase GroES-like domain IC774_21445 PF00107 Zinc-binding dehydrogenase IC774_21450 PF03466 LysR substrate binding domain IC774_21450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC774_21455 PF00872 Transposase, Mutator family IC774_21470 PF00916 Sulfate permease family IC774_21470 PF01740 STAS domain IC774_21475 PF05973 Phage derived protein Gp49-like (DUF891) IC774_21510 PF05973 Phage derived protein Gp49-like (DUF891) IC774_21530 PF00665 Integrase core domain IC774_21530 PF13936 Helix-turn-helix domain IC774_21575 PF02661 Fic/DOC family IC774_21615 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IC774_21630 PF00563 EAL domain IC774_21630 PF11809 Domain of unknown function (DUF3330) IC774_21635 PF05052 MerE protein IC774_21640 PF13411 MerR HTH family regulatory protein IC774_21645 PF00403 Heavy-metal-associated domain IC774_21645 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC774_21645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC774_21650 PF03432 Relaxase/Mobilisation nuclease domain IC774_21665 PF10706 Aminoglycoside-2''-adenylyltransferase IC774_21690 PF03432 Relaxase/Mobilisation nuclease domain