locus-tag class description IC779_00005 PF08299 Bacterial dnaA protein helix-turn-helix IC779_00005 PF00308 Bacterial dnaA protein IC779_00005 PF11638 DnaA N-terminal domain IC779_00010 PF02767 DNA polymerase III beta subunit, central domain IC779_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain IC779_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain IC779_00015 PF02463 RecF/RecN/SMC N terminal domain IC779_00020 PF18053 DNA gyrase B subunit insert domain IC779_00020 PF00204 DNA gyrase B IC779_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_00020 PF00986 DNA gyrase B subunit, carboxyl terminus IC779_00020 PF01751 Toprim domain IC779_00030 PF09335 SNARE associated Golgi protein IC779_00035 PF12848 ABC transporter IC779_00035 PF00005 ABC transporter IC779_00055 PF01521 Iron-sulphur cluster biosynthesis IC779_00060 PF00561 alpha/beta hydrolase fold IC779_00065 PF03702 Anhydro-N-acetylmuramic acid kinase IC779_00070 PF00579 tRNA synthetases class I (W and Y) IC779_00110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC779_00115 PF01252 Signal peptidase (SPase) II IC779_00120 PF08264 Anticodon-binding domain of tRNA IC779_00120 PF00133 tRNA synthetases class I (I, L, M and V) IC779_00120 PF06827 Zinc finger found in FPG and IleRS IC779_00125 PF06574 FAD synthetase IC779_00125 PF01687 Riboflavin kinase IC779_00135 PF01048 Phosphorylase superfamily IC779_00140 PF08362 YcdC-like protein, C-terminal region IC779_00140 PF00440 Bacterial regulatory proteins, tetR family IC779_00145 PF00005 ABC transporter IC779_00150 PF00528 Binding-protein-dependent transport system inner membrane component IC779_00155 PF00296 Luciferase-like monooxygenase IC779_00160 PF09084 NMT1/THI5 like IC779_00165 PF09084 NMT1/THI5 like IC779_00170 PF00696 Amino acid kinase family IC779_00170 PF00583 Acetyltransferase (GNAT) family IC779_00185 PF00106 short chain dehydrogenase IC779_00190 PF13419 Haloacid dehalogenase-like hydrolase IC779_00200 PF01323 DSBA-like thioredoxin domain IC779_00205 PF08360 QacR-like protein, C-terminal region IC779_00205 PF00440 Bacterial regulatory proteins, tetR family IC779_00210 PF00440 Bacterial regulatory proteins, tetR family IC779_00215 PF00175 Oxidoreductase NAD-binding domain IC779_00220 PF00487 Fatty acid desaturase IC779_00225 PF03725 3' exoribonuclease family, domain 2 IC779_00225 PF01138 3' exoribonuclease family, domain 1 IC779_00230 PF05506 Domain of unknown function (DUF756) IC779_00230 PF04185 Phosphoesterase family IC779_00240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IC779_00240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IC779_00245 PF01510 N-acetylmuramoyl-L-alanine amidase IC779_00250 PF03023 Lipid II flippase MurJ IC779_00255 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IC779_00255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC779_00260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC779_00260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IC779_00265 PF13614 AAA domain IC779_00265 PF02706 Chain length determinant protein IC779_00265 PF13807 G-rich domain on putative tyrosine kinase IC779_00270 PF01451 Low molecular weight phosphotyrosine protein phosphatase IC779_00275 PF02563 Polysaccharide biosynthesis/export protein IC779_00275 PF10531 SLBB domain IC779_00275 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IC779_00280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IC779_00280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IC779_00280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IC779_00285 PF16363 GDP-mannose 4,6 dehydratase IC779_00290 PF04321 RmlD substrate binding domain IC779_00295 PF00483 Nucleotidyl transferase IC779_00300 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IC779_00305 PF02719 Polysaccharide biosynthesis protein IC779_00305 PF08485 Polysaccharide biosynthesis protein C-terminal IC779_00310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IC779_00315 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IC779_00340 PF00535 Glycosyl transferase family 2 IC779_00350 PF01370 NAD dependent epimerase/dehydratase family IC779_00360 PF02397 Bacterial sugar transferase IC779_00365 PF00483 Nucleotidyl transferase IC779_00370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IC779_00370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IC779_00370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IC779_00375 PF00342 Phosphoglucose isomerase IC779_00385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC779_00385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC779_00385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC779_00385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC779_00390 PF02652 L-lactate permease IC779_00395 PF00392 Bacterial regulatory proteins, gntR family IC779_00395 PF07729 FCD domain IC779_00400 PF01070 FMN-dependent dehydrogenase IC779_00405 PF01565 FAD binding domain IC779_00405 PF09330 D-lactate dehydrogenase, membrane binding IC779_00410 PF00155 Aminotransferase class I and II IC779_00420 PF00392 Bacterial regulatory proteins, gntR family IC779_00420 PF07729 FCD domain IC779_00430 PF00285 Citrate synthase, C-terminal domain IC779_00435 PF00330 Aconitase family (aconitate hydratase) IC779_00435 PF00694 Aconitase C-terminal domain IC779_00475 PF02801 Beta-ketoacyl synthase, C-terminal domain IC779_00475 PF00109 Beta-ketoacyl synthase, N-terminal domain IC779_00485 PF08361 MAATS-type transcriptional repressor, C-terminal region IC779_00485 PF00440 Bacterial regulatory proteins, tetR family IC779_00505 PF00849 RNA pseudouridylate synthase IC779_00520 PF00593 TonB dependent receptor IC779_00520 PF07715 TonB-dependent Receptor Plug Domain IC779_00530 PF01037 Lrp/AsnC ligand binding domain IC779_00535 PF01266 FAD dependent oxidoreductase IC779_00540 PF00842 Alanine racemase, C-terminal domain IC779_00540 PF01168 Alanine racemase, N-terminal domain IC779_00545 PF01042 Endoribonuclease L-PSP IC779_00550 PF00324 Amino acid permease IC779_00555 PF00324 Amino acid permease IC779_00565 PF00171 Aldehyde dehydrogenase family IC779_00570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IC779_00570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IC779_00575 PF00501 AMP-binding enzyme IC779_00575 PF13193 AMP-binding enzyme C-terminal domain IC779_00580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_00580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_00580 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_00585 PF00378 Enoyl-CoA hydratase/isomerase IC779_00590 PF00378 Enoyl-CoA hydratase/isomerase IC779_00595 PF07690 Major Facilitator Superfamily IC779_00595 PF00083 Sugar (and other) transporter IC779_00600 PF00765 Autoinducer synthase IC779_00610 PF00196 Bacterial regulatory proteins, luxR family IC779_00610 PF03472 Autoinducer binding domain IC779_00615 PF00501 AMP-binding enzyme IC779_00620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_00620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_00620 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_00630 PF00501 AMP-binding enzyme IC779_00630 PF00550 Phosphopantetheine attachment site IC779_00630 PF07993 Male sterility protein IC779_00630 PF13193 AMP-binding enzyme C-terminal domain IC779_00630 PF00668 Condensation domain IC779_00635 PF00668 Condensation domain IC779_00635 PF00501 AMP-binding enzyme IC779_00635 PF13193 AMP-binding enzyme C-terminal domain IC779_00635 PF00975 Thioesterase domain IC779_00635 PF00550 Phosphopantetheine attachment site IC779_00650 PF16363 GDP-mannose 4,6 dehydratase IC779_00655 PF01648 4'-phosphopantetheinyl transferase superfamily IC779_00670 PF01722 BolA-like protein IC779_00680 PF13614 AAA domain IC779_00695 PF09335 SNARE associated Golgi protein IC779_00700 PF07681 DoxX IC779_00705 PF04286 Protein of unknown function (DUF445) IC779_00705 PF04286 Protein of unknown function (DUF445) IC779_00710 PF02540 NAD synthase IC779_00710 PF00958 GMP synthase C terminal domain IC779_00710 PF00117 Glutamine amidotransferase class-I IC779_00715 PF13302 Acetyltransferase (GNAT) domain IC779_00720 PF03551 Transcriptional regulator PadR-like family IC779_00725 PF01475 Ferric uptake regulator family IC779_00735 PF02678 Pirin IC779_00735 PF05726 Pirin C-terminal cupin domain IC779_00755 PF00750 tRNA synthetases class I (R) IC779_00755 PF03485 Arginyl tRNA synthetase N terminal domain IC779_00755 PF05746 DALR anticodon binding domain IC779_00760 PF03949 Malic enzyme, NAD binding domain IC779_00760 PF00390 Malic enzyme, N-terminal domain IC779_00770 PF00665 Integrase core domain IC779_00770 PF13936 Helix-turn-helix domain IC779_00780 PF01810 LysE type translocator IC779_00785 PF00950 ABC 3 transport family IC779_00790 PF00005 ABC transporter IC779_00810 PF00119 ATP synthase A chain IC779_00815 PF00137 ATP synthase subunit C IC779_00820 PF00430 ATP synthase B/B' CF(0) IC779_00825 PF00213 ATP synthase delta (OSCP) subunit IC779_00830 PF00306 ATP synthase alpha/beta chain, C terminal domain IC779_00830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC779_00830 PF02874 ATP synthase alpha/beta family, beta-barrel domain IC779_00835 PF00231 ATP synthase IC779_00840 PF02874 ATP synthase alpha/beta family, beta-barrel domain IC779_00840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC779_00845 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IC779_00855 PF00255 Glutathione peroxidase IC779_00865 PF07690 Major Facilitator Superfamily IC779_00870 PF00440 Bacterial regulatory proteins, tetR family IC779_00875 PF00892 EamA-like transporter family IC779_00880 PF01300 Telomere recombination IC779_00885 PF02481 DNA recombination-mediator protein A IC779_00885 PF17782 DprA winged helix domain IC779_00895 PF01327 Polypeptide deformylase IC779_00920 PF00440 Bacterial regulatory proteins, tetR family IC779_00955 PF00291 Pyridoxal-phosphate dependent enzyme IC779_00970 PF03358 NADPH-dependent FMN reductase IC779_00990 PF04055 Radical SAM superfamily IC779_00990 PF08497 Radical SAM N-terminal IC779_00990 PF11842 Domain of unknown function (DUF3362) IC779_01005 PF00817 impB/mucB/samB family IC779_01005 PF11799 impB/mucB/samB family C-terminal domain IC779_01005 PF11798 IMS family HHH motif IC779_01015 PF07690 Major Facilitator Superfamily IC779_01020 PF03641 Possible lysine decarboxylase IC779_01025 PF03471 Transporter associated domain IC779_01025 PF03741 Integral membrane protein TerC family IC779_01030 PF02810 SEC-C motif IC779_01035 PF03458 UPF0126 domain IC779_01040 PF07690 Major Facilitator Superfamily IC779_01045 PF03989 DNA gyrase C-terminal domain, beta-propeller IC779_01045 PF00521 DNA gyrase/topoisomerase IV, subunit A IC779_01050 PF00501 AMP-binding enzyme IC779_01050 PF13193 AMP-binding enzyme C-terminal domain IC779_01065 PF00719 Inorganic pyrophosphatase IC779_01070 PF03573 outer membrane porin, OprD family IC779_01080 PF00701 Dihydrodipicolinate synthetase family IC779_01085 PF00596 Class II Aldolase and Adducin N-terminal domain IC779_01090 PF00392 Bacterial regulatory proteins, gntR family IC779_01090 PF00155 Aminotransferase class I and II IC779_01095 PF03358 NADPH-dependent FMN reductase IC779_01100 PF13335 Magnesium chelatase, subunit ChlI C-terminal IC779_01100 PF01078 Magnesium chelatase, subunit ChlI IC779_01110 PF00543 Nitrogen regulatory protein P-II IC779_01115 PF00909 Ammonium Transporter Family IC779_01120 PF03477 ATP cone domain IC779_01125 PF01872 RibD C-terminal domain IC779_01125 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IC779_01135 PF00677 Lumazine binding domain IC779_01155 PF00883 Cytosol aminopeptidase family, catalytic domain IC779_01155 PF02789 Cytosol aminopeptidase family, N-terminal domain IC779_01160 PF03739 Lipopolysaccharide export system permease LptF/LptG IC779_01165 PF03739 Lipopolysaccharide export system permease LptF/LptG IC779_01170 PF01676 Metalloenzyme superfamily IC779_01170 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IC779_01175 PF00595 PDZ domain IC779_01175 PF03572 Peptidase family S41 IC779_01180 PF00072 Response regulator receiver domain IC779_01180 PF00158 Sigma-54 interaction domain IC779_01180 PF02954 Bacterial regulatory protein, Fis family IC779_01185 PF00512 His Kinase A (phospho-acceptor) domain IC779_01185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_01190 PF00196 Bacterial regulatory proteins, luxR family IC779_01190 PF00072 Response regulator receiver domain IC779_01195 PF00768 D-alanyl-D-alanine carboxypeptidase IC779_01200 PF00291 Pyridoxal-phosphate dependent enzyme IC779_01205 PF01842 ACT domain IC779_01205 PF00742 Homoserine dehydrogenase IC779_01205 PF03447 Homoserine dehydrogenase, NAD binding domain IC779_01210 PF13098 Thioredoxin-like domain IC779_01210 PF10411 Disulfide bond isomerase protein N-terminus IC779_01215 PF02899 Phage integrase, N-terminal SAM-like domain IC779_01215 PF00589 Phage integrase family IC779_01225 PF07664 Ferrous iron transport protein B C terminus IC779_01225 PF02421 Ferrous iron transport protein B IC779_01225 PF07670 Nucleoside recognition IC779_01235 PF02875 Mur ligase family, glutamate ligase domain IC779_01235 PF08245 Mur ligase middle domain IC779_01245 PF00749 tRNA synthetases class I (E and Q), catalytic domain IC779_01250 PF01258 Prokaryotic dksA/traR C4-type zinc finger IC779_01255 PF00149 Calcineurin-like phosphoesterase IC779_01260 PF00293 NUDIX domain IC779_01265 PF13667 ThiC-associated domain IC779_01265 PF01964 Radical SAM ThiC family IC779_01280 PF00892 EamA-like transporter family IC779_01290 PF02321 Outer membrane efflux protein IC779_01295 PF01895 PhoU domain IC779_01300 PF04362 Bacterial Fe(2+) trafficking IC779_01305 PF14698 Argininosuccinate lyase C-terminal IC779_01305 PF00206 Lyase IC779_01310 PF07694 5TMR of 5TMR-LYT IC779_01310 PF06580 Histidine kinase IC779_01310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_01315 PF04397 LytTr DNA-binding domain IC779_01315 PF00072 Response regulator receiver domain IC779_01320 PF03900 Porphobilinogen deaminase, C-terminal domain IC779_01320 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IC779_01345 PF00816 H-NS histone family IC779_01360 PF00263 Bacterial type II and III secretion system protein IC779_01360 PF03958 Bacterial type II/III secretion system short domain IC779_01365 PF12401 Protein of unknown function (DUF2662) IC779_01365 PF00498 FHA domain IC779_01370 PF13419 Haloacid dehalogenase-like hydrolase IC779_01375 PF00425 chorismate binding enzyme IC779_01375 PF04715 Anthranilate synthase component I, N terminal region IC779_01400 PF03143 Elongation factor Tu C-terminal domain IC779_01400 PF03144 Elongation factor Tu domain 2 IC779_01400 PF00009 Elongation factor Tu GTP binding domain IC779_01410 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IC779_01415 PF00467 KOW motif IC779_01415 PF02357 Transcription termination factor nusG IC779_01420 PF03946 Ribosomal protein L11, N-terminal domain IC779_01420 PF00298 Ribosomal protein L11, RNA binding domain IC779_01425 PF00687 Ribosomal protein L1p/L10e family IC779_01430 PF00466 Ribosomal protein L10 IC779_01435 PF00542 Ribosomal protein L7/L12 C-terminal domain IC779_01435 PF16320 Ribosomal protein L7/L12 dimerisation domain IC779_01440 PF04561 RNA polymerase Rpb2, domain 2 IC779_01440 PF04563 RNA polymerase beta subunit IC779_01440 PF10385 RNA polymerase beta subunit external 1 domain IC779_01440 PF00562 RNA polymerase Rpb2, domain 6 IC779_01440 PF04560 RNA polymerase Rpb2, domain 7 IC779_01440 PF04565 RNA polymerase Rpb2, domain 3 IC779_01445 PF04997 RNA polymerase Rpb1, domain 1 IC779_01445 PF04998 RNA polymerase Rpb1, domain 5 IC779_01445 PF05000 RNA polymerase Rpb1, domain 4 IC779_01445 PF04983 RNA polymerase Rpb1, domain 3 IC779_01445 PF00623 RNA polymerase Rpb1, domain 2 IC779_01465 PF00561 alpha/beta hydrolase fold IC779_01470 PF13726 Na+-H+ antiporter family IC779_01470 PF03553 Na+/H+ antiporter family IC779_01485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_01485 PF00183 Hsp90 protein IC779_01500 PF01323 DSBA-like thioredoxin domain IC779_01510 PF00376 MerR family regulatory protein IC779_01510 PF09278 MerR, DNA binding IC779_01525 PF00108 Thiolase, N-terminal domain IC779_01525 PF02803 Thiolase, C-terminal domain IC779_01530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC779_01530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC779_01530 PF00378 Enoyl-CoA hydratase/isomerase IC779_01555 PF02151 UvrB/uvrC motif IC779_01555 PF08459 UvrC Helix-hairpin-helix N-terminal IC779_01555 PF01541 GIY-YIG catalytic domain IC779_01565 PF01066 CDP-alcohol phosphatidyltransferase IC779_01580 PF04632 Fusaric acid resistance protein family IC779_01590 PF13533 Biotin-lipoyl like IC779_01595 PF03652 Holliday junction resolvase IC779_01600 PF02622 Uncharacterized ACR, COG1678 IC779_01605 PF02463 RecF/RecN/SMC N terminal domain IC779_01610 PF06865 Pyrimidine/purine nucleoside phosphorylase IC779_01615 PF00588 SpoU rRNA Methylase family IC779_01615 PF08032 RNA 2'-O ribose methyltransferase substrate binding IC779_01625 PF01121 Dephospho-CoA kinase IC779_01630 PF06750 Bacterial Peptidase A24 N-terminal domain IC779_01630 PF01478 Type IV leader peptidase family IC779_01635 PF00482 Type II secretion system (T2SS), protein F IC779_01640 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IC779_01640 PF00437 Type II/IV secretion system protein IC779_01645 PF00121 Triosephosphate isomerase IC779_01650 PF03840 Preprotein translocase SecG subunit IC779_01670 PF02576 RimP N-terminal domain IC779_01670 PF17384 RimP C-terminal SH3 domain IC779_01675 PF13184 NusA-like KH domain IC779_01675 PF08529 NusA N-terminal domain IC779_01675 PF00575 S1 RNA binding domain IC779_01680 PF11987 Translation-initiation factor 2 IC779_01680 PF04760 Translation initiation factor IF-2, N-terminal region IC779_01680 PF00009 Elongation factor Tu GTP binding domain IC779_01680 PF08364 Bacterial translation initiation factor IF-2 associated region IC779_01685 PF02033 Ribosome-binding factor A IC779_01690 PF03334 Na+/H+ antiporter subunit IC779_01695 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IC779_01700 PF01899 Na+/H+ ion antiporter subunit IC779_01705 PF00361 Proton-conducting membrane transporter IC779_01710 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IC779_01715 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IC779_01715 PF13244 Domain of unknown function (DUF4040) IC779_01715 PF00361 Proton-conducting membrane transporter IC779_01715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IC779_01730 PF01502 Phosphoribosyl-AMP cyclohydrolase IC779_01740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC779_01745 PF01494 FAD binding domain IC779_01750 PF03109 ABC1 family IC779_01760 PF01209 ubiE/COQ5 methyltransferase family IC779_01770 PF03976 Polyphosphate kinase 2 (PPK2) IC779_01775 PF07690 Major Facilitator Superfamily IC779_01785 PF17946 RecC C-terminal domain IC779_01790 PF12705 PD-(D/E)XK nuclease superfamily IC779_01790 PF13361 UvrD-like helicase C-terminal domain IC779_01790 PF00580 UvrD/REP helicase N-terminal domain IC779_01795 PF13538 UvrD-like helicase C-terminal domain IC779_01800 PF00144 Beta-lactamase IC779_01805 PF00312 Ribosomal protein S15 IC779_01810 PF00575 S1 RNA binding domain IC779_01810 PF03725 3' exoribonuclease family, domain 2 IC779_01810 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IC779_01810 PF01138 3' exoribonuclease family, domain 1 IC779_01810 PF00013 KH domain IC779_01815 PF01544 CorA-like Mg2+ transporter protein IC779_01825 PF00226 DnaJ domain IC779_01825 PF01556 DnaJ C terminal domain IC779_01835 PF01430 Hsp33 protein IC779_01840 PF00999 Sodium/hydrogen exchanger family IC779_01840 PF02254 TrkA-N domain IC779_01845 PF17764 3′ DNA-binding domain (3′BD) IC779_01845 PF00271 Helicase conserved C-terminal domain IC779_01845 PF18074 Primosomal protein N C-terminal domain IC779_01845 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IC779_01845 PF00270 DEAD/DEAH box helicase IC779_01850 PF00482 Type II secretion system (T2SS), protein F IC779_01855 PF07963 Prokaryotic N-terminal methylation motif IC779_01855 PF08334 Type II secretion system (T2SS), protein G IC779_01870 PF01588 Putative tRNA binding domain IC779_01875 PF00795 Carbon-nitrogen hydrolase IC779_01880 PF03471 Transporter associated domain IC779_01880 PF00571 CBS domain IC779_01885 PF01206 Sulfurtransferase TusA IC779_01905 PF01177 Asp/Glu/Hydantoin racemase IC779_01915 PF00762 Ferrochelatase IC779_01920 PF00753 Metallo-beta-lactamase superfamily IC779_01925 PF03884 DNA gyrase inhibitor YacG IC779_01935 PF13247 4Fe-4S dicluster domain IC779_01935 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IC779_01935 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_01945 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IC779_01960 PF01197 Ribosomal protein L31 IC779_01965 PF03109 ABC1 family IC779_01970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_01970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC779_01975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_01975 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC779_01975 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_01980 PF01554 MatE IC779_01990 PF04055 Radical SAM superfamily IC779_01990 PF06969 HemN C-terminal domain IC779_01995 PF00106 short chain dehydrogenase IC779_02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_02000 PF03466 LysR substrate binding domain IC779_02015 PF13193 AMP-binding enzyme C-terminal domain IC779_02015 PF00501 AMP-binding enzyme IC779_02020 PF10150 Ribonuclease E/G family IC779_02020 PF12111 Polyribonucleotide phosphorylase C terminal IC779_02020 PF00575 S1 RNA binding domain IC779_02025 PF01479 S4 domain IC779_02025 PF00849 RNA pseudouridylate synthase IC779_02035 PF13280 WYL domain IC779_02035 PF08279 HTH domain IC779_02040 PF02798 Glutathione S-transferase, N-terminal domain IC779_02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_02050 PF03466 LysR substrate binding domain IC779_02055 PF12706 Beta-lactamase superfamily domain IC779_02060 PF00141 Peroxidase IC779_02070 PF00293 NUDIX domain IC779_02095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_02095 PF03466 LysR substrate binding domain IC779_02105 PF00330 Aconitase family (aconitate hydratase) IC779_02110 PF00694 Aconitase C-terminal domain IC779_02120 PF00180 Isocitrate/isopropylmalate dehydrogenase IC779_02135 PF01176 Translation initiation factor 1A / IF-1 IC779_02145 PF01416 tRNA pseudouridine synthase IC779_02165 PF02774 Semialdehyde dehydrogenase, dimerisation domain IC779_02165 PF01118 Semialdehyde dehydrogenase, NAD binding domain IC779_02175 PF00375 Sodium:dicarboxylate symporter family IC779_02185 PF03279 Bacterial lipid A biosynthesis acyltransferase IC779_02190 PF01810 LysE type translocator IC779_02200 PF00005 ABC transporter IC779_02200 PF16326 ABC transporter C-terminal domain IC779_02200 PF12848 ABC transporter IC779_02205 PF04102 SlyX IC779_02210 PF00107 Zinc-binding dehydrogenase IC779_02210 PF08240 Alcohol dehydrogenase GroES-like domain IC779_02215 PF01638 HxlR-like helix-turn-helix IC779_02225 PF01131 DNA topoisomerase IC779_02225 PF01396 Topoisomerase DNA binding C4 zinc finger IC779_02225 PF01751 Toprim domain IC779_02225 PF08272 Topoisomerase I zinc-ribbon-like IC779_02240 PF13361 UvrD-like helicase C-terminal domain IC779_02240 PF00580 UvrD/REP helicase N-terminal domain IC779_02245 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IC779_02265 PF02254 TrkA-N domain IC779_02265 PF00999 Sodium/hydrogen exchanger family IC779_02270 PF00471 Ribosomal protein L33 IC779_02275 PF00830 Ribosomal L28 family IC779_02280 PF00171 Aldehyde dehydrogenase family IC779_02290 PF00551 Formyl transferase IC779_02290 PF01842 ACT domain IC779_02300 PF01618 MotA/TolQ/ExbB proton channel family IC779_02305 PF02472 Biopolymer transport protein ExbD/TolR IC779_02310 PF01625 Peptide methionine sulfoxide reductase IC779_02330 PF00186 Dihydrofolate reductase IC779_02335 PF00303 Thymidylate synthase IC779_02350 PF01790 Prolipoprotein diacylglyceryl transferase IC779_02365 PF00902 Sec-independent protein translocase protein (TatC) IC779_02370 PF02416 mttA/Hcf106 family IC779_02375 PF02416 mttA/Hcf106 family IC779_02385 PF01725 Ham1 family IC779_02395 PF00561 alpha/beta hydrolase fold IC779_02395 PF07021 Methionine biosynthesis protein MetW IC779_02400 PF00561 alpha/beta hydrolase fold IC779_02405 PF08502 LeuA allosteric (dimerisation) domain IC779_02405 PF00682 HMGL-like IC779_02410 PF13640 2OG-Fe(II) oxygenase superfamily IC779_02410 PF18331 PKHD-type hydroxylase C-terminal domain IC779_02415 PF07715 TonB-dependent Receptor Plug Domain IC779_02415 PF00593 TonB dependent receptor IC779_02420 PF05697 Bacterial trigger factor protein (TF) IC779_02420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC779_02420 PF05698 Bacterial trigger factor protein (TF) C-terminus IC779_02425 PF00574 Clp protease IC779_02430 PF07724 AAA domain (Cdc48 subfamily) IC779_02430 PF06689 ClpX C4-type zinc finger IC779_02430 PF10431 C-terminal, D2-small domain, of ClpB protein IC779_02445 PF05681 Fumarate hydratase (Fumerase) IC779_02445 PF05683 Fumarase C-terminus IC779_02450 PF07085 DRTGG domain IC779_02450 PF01515 Phosphate acetyl/butaryl transferase IC779_02455 PF00871 Acetokinase family IC779_02460 PF00920 Dehydratase family IC779_02465 PF01081 KDPG and KHG aldolase IC779_02470 PF02447 GntP family permease IC779_02475 PF01202 Shikimate kinase IC779_02480 PF00171 Aldehyde dehydrogenase family IC779_02485 PF00171 Aldehyde dehydrogenase family IC779_02490 PF00561 alpha/beta hydrolase fold IC779_02500 PF00933 Glycosyl hydrolase family 3 N terminal domain IC779_02505 PF17804 Tail specific protease N-terminal domain IC779_02505 PF03572 Peptidase family S41 IC779_02505 PF00595 PDZ domain IC779_02505 PF11818 C-terminal domain of tail specific protease (DUF3340) IC779_02510 PF13439 Glycosyltransferase Family 4 IC779_02510 PF00534 Glycosyl transferases group 1 IC779_02515 PF01569 PAP2 superfamily IC779_02520 PF04384 Iron-sulphur cluster assembly IC779_02525 PF00334 Nucleoside diphosphate kinase IC779_02530 PF04055 Radical SAM superfamily IC779_02540 PF13464 Domain of unknown function (DUF4115) IC779_02545 PF04551 GcpE protein IC779_02550 PF13393 Histidyl-tRNA synthetase IC779_02550 PF03129 Anticodon binding domain IC779_02560 PF13360 PQQ-like domain IC779_02565 PF01926 50S ribosome-binding GTPase IC779_02565 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IC779_02575 PF02556 Preprotein translocase subunit SecB IC779_02580 PF00462 Glutaredoxin IC779_02590 PF03193 RsgA GTPase IC779_02595 PF00929 Exonuclease IC779_02610 PF02321 Outer membrane efflux protein IC779_02615 PF00005 ABC transporter IC779_02615 PF02687 FtsX-like permease family IC779_02615 PF12704 MacB-like periplasmic core domain IC779_02620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC779_02635 PF09334 tRNA synthetases class I (M) IC779_02635 PF00133 tRNA synthetases class I (I, L, M and V) IC779_02635 PF13603 Leucyl-tRNA synthetase, Domain 2 IC779_02635 PF08264 Anticodon-binding domain of tRNA IC779_02645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC779_02645 PF00205 Thiamine pyrophosphate enzyme, central domain IC779_02645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC779_02650 PF10369 Small subunit of acetolactate synthase IC779_02655 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IC779_02655 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IC779_02690 PF00009 Elongation factor Tu GTP binding domain IC779_02690 PF16658 Class II release factor RF3, C-terminal domain IC779_02690 PF03144 Elongation factor Tu domain 2 IC779_02705 PF01026 TatD related DNase IC779_02710 PF00694 Aconitase C-terminal domain IC779_02710 PF00330 Aconitase family (aconitate hydratase) IC779_02715 PF00899 ThiF family IC779_02725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_02725 PF03466 LysR substrate binding domain IC779_02735 PF01207 Dihydrouridine synthase (Dus) IC779_02740 PF00589 Phage integrase family IC779_02815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC779_02815 PF00529 HlyD membrane-fusion protein of T1SS IC779_02820 PF00873 AcrB/AcrD/AcrF family IC779_02840 PF07690 Major Facilitator Superfamily IC779_02855 PF01545 Cation efflux family IC779_02860 PF02417 Chromate transporter IC779_02880 PF07690 Major Facilitator Superfamily IC779_02890 PF00892 EamA-like transporter family IC779_02895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IC779_02895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IC779_02900 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IC779_02905 PF02233 NAD(P) transhydrogenase beta subunit IC779_02910 PF00106 short chain dehydrogenase IC779_02925 PF01261 Xylose isomerase-like TIM barrel IC779_02930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IC779_02930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IC779_02935 PF00378 Enoyl-CoA hydratase/isomerase IC779_02940 PF00072 Response regulator receiver domain IC779_02940 PF01627 Hpt domain IC779_02940 PF00672 HAMP domain IC779_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_02940 PF00512 His Kinase A (phospho-acceptor) domain IC779_02940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IC779_02945 PF00291 Pyridoxal-phosphate dependent enzyme IC779_02955 PF05958 tRNA (Uracil-5-)-methyltransferase IC779_02960 PF02824 TGS domain IC779_02960 PF04607 Region found in RelA / SpoT proteins IC779_02960 PF13291 ACT domain IC779_02970 PF03819 MazG nucleotide pyrophosphohydrolase domain IC779_02980 PF01743 Poly A polymerase head domain IC779_02980 PF12626 Polymerase A arginine-rich C-terminus IC779_02980 PF12627 Probable RNA and SrmB- binding site of polymerase A IC779_02985 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IC779_02990 PF02548 Ketopantoate hydroxymethyltransferase IC779_02995 PF02569 Pantoate-beta-alanine ligase IC779_03000 PF03668 P-loop ATPase protein family IC779_03005 PF00381 PTS HPr component phosphorylation site IC779_03010 PF04751 Protein of unknown function (DUF615) IC779_03015 PF13193 AMP-binding enzyme C-terminal domain IC779_03015 PF00501 AMP-binding enzyme IC779_03020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IC779_03020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC779_03020 PF02824 TGS domain IC779_03020 PF03129 Anticodon binding domain IC779_03025 PF00707 Translation initiation factor IF-3, C-terminal domain IC779_03025 PF05198 Translation initiation factor IF-3, N-terminal domain IC779_03030 PF00043 Glutathione S-transferase, C-terminal domain IC779_03030 PF02798 Glutathione S-transferase, N-terminal domain IC779_03035 PF09335 SNARE associated Golgi protein IC779_03040 PF07690 Major Facilitator Superfamily IC779_03045 PF01632 Ribosomal protein L35 IC779_03050 PF00453 Ribosomal protein L20 IC779_03070 PF01409 tRNA synthetases class II core domain (F) IC779_03070 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IC779_03075 PF03484 tRNA synthetase B5 domain IC779_03075 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IC779_03075 PF01588 Putative tRNA binding domain IC779_03075 PF03147 Ferredoxin-fold anticodon binding domain IC779_03075 PF03483 B3/4 domain IC779_03080 PF00216 Bacterial DNA-binding protein IC779_03095 PF07497 Rho termination factor, RNA-binding domain IC779_03095 PF07498 Rho termination factor, N-terminal domain IC779_03095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC779_03100 PF00085 Thioredoxin IC779_03105 PF02541 Ppx/GppA phosphatase family IC779_03110 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IC779_03115 PF01171 PP-loop family IC779_03115 PF09179 TilS substrate binding domain IC779_03115 PF11734 TilS substrate C-terminal domain IC779_03120 PF03807 NADP oxidoreductase coenzyme F420-dependent IC779_03120 PF14748 Pyrroline-5-carboxylate reductase dimerisation IC779_03125 PF02325 YGGT family IC779_03150 PF00437 Type II/IV secretion system protein IC779_03155 PF02566 OsmC-like protein IC779_03160 PF01047 MarR family IC779_03170 PF00795 Carbon-nitrogen hydrolase IC779_03215 PF04963 Sigma-54 factor, core binding domain IC779_03215 PF04552 Sigma-54, DNA binding domain IC779_03215 PF00309 Sigma-54 factor, Activator interacting domain (AID) IC779_03220 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IC779_03225 PF01722 BolA-like protein IC779_03230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IC779_03235 PF01634 ATP phosphoribosyltransferase IC779_03240 PF00815 Histidinol dehydrogenase IC779_03245 PF00155 Aminotransferase class I and II IC779_03250 PF00425 chorismate binding enzyme IC779_03250 PF04715 Anthranilate synthase component I, N terminal region IC779_03290 PF00293 NUDIX domain IC779_03295 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_03300 PF00814 Glycoprotease family IC779_03305 PF04445 Putative SAM-dependent methyltransferase IC779_03315 PF00756 Putative esterase IC779_03325 PF00834 Ribulose-phosphate 3 epimerase family IC779_03340 PF07731 Multicopper oxidase IC779_03340 PF07732 Multicopper oxidase IC779_03340 PF00394 Multicopper oxidase IC779_03355 PF00893 Small Multidrug Resistance protein IC779_03365 PF00665 Integrase core domain IC779_03365 PF13936 Helix-turn-helix domain IC779_03375 PF01960 ArgJ family IC779_03380 PF02445 Quinolinate synthetase A protein IC779_03410 PF08240 Alcohol dehydrogenase GroES-like domain IC779_03410 PF00107 Zinc-binding dehydrogenase IC779_03415 PF03466 LysR substrate binding domain IC779_03415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_03420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_03420 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_03420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_03425 PF07690 Major Facilitator Superfamily IC779_03430 PF02515 CoA-transferase family III IC779_03440 PF00440 Bacterial regulatory proteins, tetR family IC779_03440 PF17932 Tetracyclin repressor-like, C-terminal domain IC779_03455 PF00890 FAD binding domain IC779_03455 PF14537 Cytochrome c3 IC779_03460 PF03466 LysR substrate binding domain IC779_03460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_03470 PF07690 Major Facilitator Superfamily IC779_03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_03475 PF03466 LysR substrate binding domain IC779_03480 PF01810 LysE type translocator IC779_03485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_03485 PF03466 LysR substrate binding domain IC779_03495 PF01717 Cobalamin-independent synthase, Catalytic domain IC779_03495 PF08267 Cobalamin-independent synthase, N-terminal domain IC779_03500 PF01613 Flavin reductase like domain IC779_03530 PF17074 Darcynin, domain of unknown function IC779_03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_03550 PF03466 LysR substrate binding domain IC779_03555 PF03969 AFG1-like ATPase IC779_03570 PF00155 Aminotransferase class I and II IC779_03585 PF00268 Ribonucleotide reductase, small chain IC779_03595 PF02867 Ribonucleotide reductase, barrel domain IC779_03595 PF00317 Ribonucleotide reductase, all-alpha domain IC779_03595 PF03477 ATP cone domain IC779_03605 PF00486 Transcriptional regulatory protein, C terminal IC779_03605 PF00072 Response regulator receiver domain IC779_03610 PF00672 HAMP domain IC779_03610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_03610 PF00512 His Kinase A (phospho-acceptor) domain IC779_03620 PF17158 Membrane-associated sensor, integral membrane domain IC779_03620 PF00990 Diguanylate cyclase, GGDEF domain IC779_03625 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IC779_03630 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IC779_03635 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IC779_03635 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IC779_03645 PF10531 SLBB domain IC779_03645 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IC779_03645 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IC779_03650 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IC779_03650 PF00384 Molybdopterin oxidoreductase IC779_03650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IC779_03655 PF00146 NADH dehydrogenase IC779_03660 PF12838 4Fe-4S dicluster domain IC779_03665 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IC779_03670 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IC779_03675 PF00361 Proton-conducting membrane transporter IC779_03675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IC779_03680 PF00361 Proton-conducting membrane transporter IC779_03685 PF00361 Proton-conducting membrane transporter IC779_03695 PF00313 'Cold-shock' DNA-binding domain IC779_03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_03705 PF03466 LysR substrate binding domain IC779_03710 PF00970 Oxidoreductase FAD-binding domain IC779_03710 PF00175 Oxidoreductase NAD-binding domain IC779_03725 PF05552 Conserved TM helix IC779_03740 PF00291 Pyridoxal-phosphate dependent enzyme IC779_03745 PF13533 Biotin-lipoyl like IC779_03775 PF01588 Putative tRNA binding domain IC779_03775 PF09334 tRNA synthetases class I (M) IC779_03785 PF10609 NUBPL iron-transfer P-loop NTPase IC779_03790 PF01048 Phosphorylase superfamily IC779_03805 PF00692 dUTPase IC779_03835 PF01207 Dihydrouridine synthase (Dus) IC779_03845 PF00448 SRP54-type protein, GTPase domain IC779_03845 PF02978 Signal peptide binding domain IC779_03845 PF02881 SRP54-type protein, helical bundle domain IC779_03850 PF03309 Type III pantothenate kinase IC779_03860 PF01925 Sulfite exporter TauE/SafE IC779_03870 PF02463 RecF/RecN/SMC N terminal domain IC779_03870 PF06470 SMC proteins Flexible Hinge Domain IC779_03880 PF00533 BRCA1 C Terminus (BRCT) domain IC779_03880 PF03120 NAD-dependent DNA ligase OB-fold domain IC779_03880 PF01653 NAD-dependent DNA ligase adenylation domain IC779_03880 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IC779_03880 PF12826 Helix-hairpin-helix motif IC779_03885 PF00210 Ferritin-like domain IC779_03890 PF07690 Major Facilitator Superfamily IC779_03895 PF00982 Glycosyltransferase family 20 IC779_03900 PF02358 Trehalose-phosphatase IC779_03905 PF08241 Methyltransferase domain IC779_03905 PF12697 Alpha/beta hydrolase family IC779_03910 PF04055 Radical SAM superfamily IC779_03910 PF06968 Biotin and Thiamin Synthesis associated domain IC779_03910 PF00202 Aminotransferase class-III IC779_03915 PF00155 Aminotransferase class I and II IC779_03930 PF01479 S4 domain IC779_03930 PF00849 RNA pseudouridylate synthase IC779_03935 PF04079 Segregation and condensation complex subunit ScpB IC779_03940 PF02616 Segregation and condensation protein ScpA IC779_03945 PF01300 Telomere recombination IC779_03950 PF04315 Elongation factor P hydroxylase IC779_03955 PF02620 Large ribosomal RNA subunit accumulation protein YceD IC779_03960 PF01783 Ribosomal L32p protein family IC779_03965 PF00698 Acyl transferase domain IC779_03975 PF00550 Phosphopantetheine attachment site IC779_03980 PF01476 LysM domain IC779_03980 PF04972 BON domain IC779_03985 PF02581 Thiamine monophosphate synthase IC779_03985 PF03070 TENA/THI-4/PQQC family IC779_03985 PF08543 Phosphomethylpyrimidine kinase IC779_03995 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IC779_04010 PF02261 Aspartate decarboxylase IC779_04015 PF01195 Peptidyl-tRNA hydrolase IC779_04020 PF01386 Ribosomal L25p family IC779_04025 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IC779_04025 PF14572 Phosphoribosyl synthetase-associated domain IC779_04050 PF08544 GHMP kinases C terminal IC779_04050 PF00288 GHMP kinases N terminal domain IC779_04055 PF03550 Outer membrane lipoprotein LolB IC779_04065 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IC779_04065 PF01488 Shikimate / quinate 5-dehydrogenase IC779_04065 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IC779_04070 PF08275 DNA primase catalytic core, N-terminal domain IC779_04070 PF08278 DNA primase DnaG DnaB-binding IC779_04070 PF10410 DnaB-helicase binding domain of primase IC779_04070 PF01807 CHC2 zinc finger IC779_04075 PF13525 Outer membrane lipoprotein IC779_04080 PF00849 RNA pseudouridylate synthase IC779_04080 PF01479 S4 domain IC779_04085 PF02578 Multi-copper polyphenol oxidoreductase laccase IC779_04090 PF03358 NADPH-dependent FMN reductase IC779_04095 PF01668 SmpB protein IC779_04100 PF01467 Cytidylyltransferase-like IC779_04105 PF00037 4Fe-4S binding domain IC779_04125 PF03466 LysR substrate binding domain IC779_04125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_04130 PF00180 Isocitrate/isopropylmalate dehydrogenase IC779_04135 PF02028 BCCT, betaine/carnitine/choline family transporter IC779_04140 PF07859 alpha/beta hydrolase fold IC779_04145 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC779_04145 PF00355 Rieske [2Fe-2S] domain IC779_04150 PF00171 Aldehyde dehydrogenase family IC779_04155 PF00175 Oxidoreductase NAD-binding domain IC779_04155 PF00111 2Fe-2S iron-sulfur cluster binding domain IC779_04155 PF00970 Oxidoreductase FAD-binding domain IC779_04170 PF00795 Carbon-nitrogen hydrolase IC779_04170 PF02540 NAD synthase IC779_04180 PF03653 Uncharacterised protein family (UPF0093) IC779_04185 PF00109 Beta-ketoacyl synthase, N-terminal domain IC779_04185 PF02801 Beta-ketoacyl synthase, C-terminal domain IC779_04195 PF00164 Ribosomal protein S12/S23 IC779_04200 PF00177 Ribosomal protein S7p/S5e IC779_04205 PF03144 Elongation factor Tu domain 2 IC779_04205 PF00009 Elongation factor Tu GTP binding domain IC779_04205 PF14492 Elongation Factor G, domain II IC779_04205 PF00679 Elongation factor G C-terminus IC779_04205 PF03764 Elongation factor G, domain IV IC779_04210 PF03143 Elongation factor Tu C-terminal domain IC779_04210 PF00009 Elongation factor Tu GTP binding domain IC779_04210 PF03144 Elongation factor Tu domain 2 IC779_04225 PF00583 Acetyltransferase (GNAT) family IC779_04230 PF04377 Arginine-tRNA-protein transferase, C terminus IC779_04230 PF04376 Arginine-tRNA-protein transferase, N terminus IC779_04235 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IC779_04240 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_04245 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IC779_04245 PF17854 FtsK alpha domain IC779_04245 PF01580 FtsK/SpoIIIE family IC779_04245 PF09397 Ftsk gamma domain IC779_04250 PF01810 LysE type translocator IC779_04260 PF03776 Septum formation topological specificity factor MinE IC779_04265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IC779_04270 PF03775 Septum formation inhibitor MinC, C-terminal domain IC779_04280 PF01553 Acyltransferase IC779_04285 PF00691 OmpA family IC779_04285 PF13488 Glycine zipper IC779_04290 PF00580 UvrD/REP helicase N-terminal domain IC779_04290 PF13361 UvrD-like helicase C-terminal domain IC779_04295 PF00692 dUTPase IC779_04300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC779_04300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC779_04300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC779_04300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC779_04305 PF00696 Amino acid kinase family IC779_04315 PF13230 Glutamine amidotransferases class-II IC779_04320 PF01814 Hemerythrin HHE cation binding domain IC779_04330 PF03658 RnfH family Ubiquitin IC779_04335 PF04355 SmpA / OmlA family IC779_04340 PF01475 Ferric uptake regulator family IC779_04345 PF00437 Type II/IV secretion system protein IC779_04350 PF00437 Type II/IV secretion system protein IC779_04355 PF01168 Alanine racemase, N-terminal domain IC779_04360 PF02673 Bacitracin resistance protein BacA IC779_04370 PF12320 Type 5 capsule protein repressor C-terminal domain IC779_04370 PF00149 Calcineurin-like phosphoesterase IC779_04390 PF01370 NAD dependent epimerase/dehydratase family IC779_04390 PF08338 Domain of unknown function (DUF1731) IC779_04395 PF01266 FAD dependent oxidoreductase IC779_04400 PF00490 Delta-aminolevulinic acid dehydratase IC779_04405 PF03061 Thioesterase superfamily IC779_04410 PF13533 Biotin-lipoyl like IC779_04415 PF07690 Major Facilitator Superfamily IC779_04485 PF12008 Type I restriction and modification enzyme - subunit R C terminal IC779_04485 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IC779_04485 PF18766 SWI2/SNF2 ATPase IC779_04510 PF00665 Integrase core domain IC779_04510 PF13936 Helix-turn-helix domain IC779_04530 PF00083 Sugar (and other) transporter IC779_04535 PF00701 Dihydrodipicolinate synthetase family IC779_04555 PF13520 Amino acid permease IC779_04560 PF02574 Homocysteine S-methyltransferase IC779_04570 PF06039 Malate:quinone oxidoreductase (Mqo) IC779_04575 PF05199 GMC oxidoreductase IC779_04575 PF00732 GMC oxidoreductase IC779_04580 PF00171 Aldehyde dehydrogenase family IC779_04585 PF13977 BetI-type transcriptional repressor, C-terminal IC779_04585 PF00440 Bacterial regulatory proteins, tetR family IC779_04590 PF02028 BCCT, betaine/carnitine/choline family transporter IC779_04595 PF02028 BCCT, betaine/carnitine/choline family transporter IC779_04605 PF03061 Thioesterase superfamily IC779_04615 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC779_04615 PF07683 Cobalamin synthesis protein cobW C-terminal domain IC779_04620 PF00375 Sodium:dicarboxylate symporter family IC779_04625 PF07152 YaeQ protein IC779_04630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC779_04635 PF14883 Hypothetical glycosyl hydrolase family 13 IC779_04635 PF01522 Polysaccharide deacetylase IC779_04640 PF00535 Glycosyl transferase family 2 IC779_04650 PF00378 Enoyl-CoA hydratase/isomerase IC779_04680 PF09339 IclR helix-turn-helix domain IC779_04680 PF01614 Bacterial transcriptional regulator IC779_04685 PF00355 Rieske [2Fe-2S] domain IC779_04695 PF00355 Rieske [2Fe-2S] domain IC779_04705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC779_04710 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_04710 PF14759 Reductase C-terminal IC779_04715 PF07690 Major Facilitator Superfamily IC779_04725 PF12697 Alpha/beta hydrolase family IC779_04735 PF01958 Domain of unknown function DUF108 IC779_04735 PF03447 Homoserine dehydrogenase, NAD binding domain IC779_04740 PF00171 Aldehyde dehydrogenase family IC779_04745 PF00205 Thiamine pyrophosphate enzyme, central domain IC779_04745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC779_04745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC779_04760 PF01327 Polypeptide deformylase IC779_04765 PF04960 Glutaminase IC779_04770 PF02311 AraC-like ligand binding domain IC779_04770 PF12833 Helix-turn-helix domain IC779_04775 PF07690 Major Facilitator Superfamily IC779_04780 PF01263 Aldose 1-epimerase IC779_04800 PF02965 Vitamin B12 dependent methionine synthase, activation domain IC779_04800 PF02607 B12 binding domain IC779_04800 PF00809 Pterin binding enzyme IC779_04800 PF02574 Homocysteine S-methyltransferase IC779_04800 PF02310 B12 binding domain IC779_04810 PF01384 Phosphate transporter family IC779_04815 PF00291 Pyridoxal-phosphate dependent enzyme IC779_04830 PF03781 Sulfatase-modifying factor enzyme 1 IC779_04835 PF00884 Sulfatase IC779_04845 PF01521 Iron-sulphur cluster biosynthesis IC779_04845 PF01106 NifU-like domain IC779_04850 PF00593 TonB dependent receptor IC779_04850 PF07715 TonB-dependent Receptor Plug Domain IC779_04860 PF00561 alpha/beta hydrolase fold IC779_04865 PF00484 Carbonic anhydrase IC779_04870 PF13472 GDSL-like Lipase/Acylhydrolase family IC779_04875 PF00005 ABC transporter IC779_04885 PF01694 Rhomboid family IC779_04890 PF00912 Transglycosylase IC779_04895 PF13090 Polyphosphate kinase C-terminal domain 2 IC779_04895 PF17941 Polyphosphate kinase C-terminal domain 1 IC779_04895 PF13089 Polyphosphate kinase N-terminal domain IC779_04895 PF02503 Polyphosphate kinase middle domain IC779_04905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_04905 PF03466 LysR substrate binding domain IC779_04910 PF00561 alpha/beta hydrolase fold IC779_04915 PF18113 Rubredoxin binding C-terminal domain IC779_04915 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_04920 PF00301 Rubredoxin IC779_04935 PF01336 OB-fold nucleic acid binding domain IC779_04935 PF00152 tRNA synthetases class II (D, K and N) IC779_04940 PF14052 Capsule assembly protein Wzi IC779_04950 PF01507 Phosphoadenosine phosphosulfate reductase family IC779_04955 PF00009 Elongation factor Tu GTP binding domain IC779_04970 PF03600 Citrate transporter IC779_04975 PF03471 Transporter associated domain IC779_04975 PF00571 CBS domain IC779_04975 PF01595 Cyclin M transmembrane N-terminal domain IC779_04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_04980 PF03466 LysR substrate binding domain IC779_04985 PF00463 Isocitrate lyase family IC779_05000 PF01774 UreD urease accessory protein IC779_05005 PF00547 Urease, gamma subunit IC779_05010 PF00699 Urease beta subunit IC779_05015 PF01979 Amidohydrolase family IC779_05015 PF00449 Urease alpha-subunit, N-terminal domain IC779_05020 PF02814 UreE urease accessory protein, N-terminal domain IC779_05020 PF05194 UreE urease accessory protein, C-terminal domain IC779_05025 PF01730 UreF IC779_05030 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC779_05050 PF03717 Penicillin-binding Protein dimerisation domain IC779_05050 PF00905 Penicillin binding protein transpeptidase domain IC779_05065 PF05191 Adenylate kinase, active site lid IC779_05075 PF00633 Helix-hairpin-helix motif IC779_05075 PF00730 HhH-GPD superfamily base excision DNA repair protein IC779_05075 PF10576 Iron-sulfur binding domain of endonuclease III IC779_05080 PF04060 Putative Fe-S cluster IC779_05085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IC779_05085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IC779_05095 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IC779_05100 PF02590 Predicted SPOUT methyltransferase IC779_05105 PF05362 Lon protease (S16) C-terminal proteolytic domain IC779_05105 PF02190 ATP-dependent protease La (LON) substrate-binding domain IC779_05105 PF00004 ATPase family associated with various cellular activities (AAA) IC779_05115 PF00691 OmpA family IC779_05115 PF04355 SmpA / OmlA family IC779_05125 PF13018 Extended Signal Peptide of Type V secretion system IC779_05125 PF03895 YadA-like membrane anchor domain IC779_05125 PF13018 Extended Signal Peptide of Type V secretion system IC779_05125 PF05662 Coiled stalk of trimeric autotransporter adhesin IC779_05125 PF05658 Head domain of trimeric autotransporter adhesin IC779_05125 PF05658 Head domain of trimeric autotransporter adhesin IC779_05125 PF03895 YadA-like membrane anchor domain IC779_05125 PF05662 Coiled stalk of trimeric autotransporter adhesin IC779_05130 PF04355 SmpA / OmlA family IC779_05130 PF00691 OmpA family IC779_05135 PF01812 5-formyltetrahydrofolate cyclo-ligase family IC779_05165 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IC779_05165 PF17854 FtsK alpha domain IC779_05165 PF09397 Ftsk gamma domain IC779_05165 PF01580 FtsK/SpoIIIE family IC779_05445 PF00717 Peptidase S24-like IC779_05495 PF05195 Aminopeptidase P, N-terminal domain IC779_05495 PF00557 Metallopeptidase family M24 IC779_05500 PF01494 FAD binding domain IC779_05505 PF01494 FAD binding domain IC779_05515 PF13411 MerR HTH family regulatory protein IC779_05525 PF01810 LysE type translocator IC779_05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_05530 PF03466 LysR substrate binding domain IC779_05540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IC779_05545 PF02021 Uncharacterised protein family UPF0102 IC779_05550 PF04972 BON domain IC779_05560 PF00293 NUDIX domain IC779_05560 PF09297 NADH pyrophosphatase zinc ribbon domain IC779_05570 PF00929 Exonuclease IC779_05575 PF01476 LysM domain IC779_05575 PF01464 Transglycosylase SLT domain IC779_05580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IC779_05585 PF00528 Binding-protein-dependent transport system inner membrane component IC779_05590 PF00528 Binding-protein-dependent transport system inner membrane component IC779_05590 PF12911 N-terminal TM domain of oligopeptide transport permease C IC779_05595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC779_05595 PF00005 ABC transporter IC779_05600 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_05600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC779_05620 PF00929 Exonuclease IC779_05625 PF01979 Amidohydrolase family IC779_05630 PF00360 Phytochrome region IC779_05630 PF00990 Diguanylate cyclase, GGDEF domain IC779_05630 PF01590 GAF domain IC779_05630 PF00563 EAL domain IC779_05635 PF00764 Arginosuccinate synthase IC779_05640 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_05640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC779_05655 PF01042 Endoribonuclease L-PSP IC779_05660 PF01266 FAD dependent oxidoreductase IC779_05665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_05665 PF03466 LysR substrate binding domain IC779_05675 PF01494 FAD binding domain IC779_05685 PF05987 Bacterial protein of unknown function (DUF898) IC779_05690 PF03180 NLPA lipoprotein IC779_05700 PF01925 Sulfite exporter TauE/SafE IC779_05735 PF01047 MarR family IC779_05740 PF00561 alpha/beta hydrolase fold IC779_05745 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IC779_05745 PF04717 Type VI secretion system, phage-baseplate injector IC779_05745 PF13296 Putative type VI secretion system Rhs element Vgr IC779_05765 PF03783 Curli production assembly/transport component CsgG IC779_05775 PF05643 Putative bacterial lipoprotein (DUF799) IC779_05785 PF00324 Amino acid permease IC779_05790 PF01266 FAD dependent oxidoreductase IC779_05795 PF00324 Amino acid permease IC779_05805 PF00392 Bacterial regulatory proteins, gntR family IC779_05805 PF07729 FCD domain IC779_05815 PF00171 Aldehyde dehydrogenase family IC779_05825 PF00202 Aminotransferase class-III IC779_05830 PF04958 Arginine N-succinyltransferase beta subunit IC779_05835 PF00324 Amino acid permease IC779_05840 PF00171 Aldehyde dehydrogenase family IC779_05845 PF12833 Helix-turn-helix domain IC779_05845 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC779_05855 PF00892 EamA-like transporter family IC779_05860 PF07519 Tannase and feruloyl esterase IC779_05870 PF03573 outer membrane porin, OprD family IC779_05875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_05875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_05875 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_05885 PF00171 Aldehyde dehydrogenase family IC779_05890 PF00378 Enoyl-CoA hydratase/isomerase IC779_05895 PF07690 Major Facilitator Superfamily IC779_05910 PF00111 2Fe-2S iron-sulfur cluster binding domain IC779_05910 PF00175 Oxidoreductase NAD-binding domain IC779_05915 PF00355 Rieske [2Fe-2S] domain IC779_05925 PF03573 outer membrane porin, OprD family IC779_05930 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IC779_05930 PF18381 YcaO cyclodehydratase C-terminal domain IC779_05935 PF05199 GMC oxidoreductase IC779_05940 PF07859 alpha/beta hydrolase fold IC779_05945 PF00106 short chain dehydrogenase IC779_05950 PF00743 Flavin-binding monooxygenase-like IC779_05955 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC779_05955 PF12833 Helix-turn-helix domain IC779_05960 PF05683 Fumarase C-terminus IC779_05965 PF05681 Fumarate hydratase (Fumerase) IC779_05970 PF07690 Major Facilitator Superfamily IC779_05975 PF03466 LysR substrate binding domain IC779_05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_05980 PF04072 Leucine carboxyl methyltransferase IC779_05985 PF00743 Flavin-binding monooxygenase-like IC779_05990 PF00106 short chain dehydrogenase IC779_06000 PF00440 Bacterial regulatory proteins, tetR family IC779_06000 PF17932 Tetracyclin repressor-like, C-terminal domain IC779_06005 PF02678 Pirin IC779_06005 PF17954 Quercetinase C-terminal cupin domain IC779_06015 PF00106 short chain dehydrogenase IC779_06020 PF00743 Flavin-binding monooxygenase-like IC779_06030 PF00860 Permease family IC779_06035 PF00962 Adenosine/AMP deaminase IC779_06040 PF01292 Prokaryotic cytochrome b561 IC779_06050 PF01351 Ribonuclease HII IC779_06055 PF02599 Global regulator protein family IC779_06060 PF00696 Amino acid kinase family IC779_06060 PF13840 ACT domain IC779_06060 PF01842 ACT domain IC779_06065 PF01411 tRNA synthetases class II (A) IC779_06065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IC779_06065 PF02272 DHHA1 domain IC779_06070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IC779_06070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IC779_06080 PF13393 Histidyl-tRNA synthetase IC779_06085 PF00709 Adenylosuccinate synthetase IC779_06100 PF00248 Aldo/keto reductase family IC779_06105 PF00027 Cyclic nucleotide-binding domain IC779_06105 PF13545 Crp-like helix-turn-helix domain IC779_06110 PF02566 OsmC-like protein IC779_06125 PF02861 Clp amino terminal domain, pathogenicity island component IC779_06125 PF00004 ATPase family associated with various cellular activities (AAA) IC779_06125 PF07724 AAA domain (Cdc48 subfamily) IC779_06125 PF17871 AAA lid domain IC779_06125 PF10431 C-terminal, D2-small domain, of ClpB protein IC779_06140 PF01170 Putative RNA methylase family UPF0020 IC779_06140 PF02926 THUMP domain IC779_06140 PF10672 S-adenosylmethionine-dependent methyltransferase IC779_06150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IC779_06150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IC779_06155 PF01979 Amidohydrolase family IC779_06160 PF00691 OmpA family IC779_06170 PF00043 Glutathione S-transferase, C-terminal domain IC779_06170 PF13417 Glutathione S-transferase, N-terminal domain IC779_06175 PF02390 Putative methyltransferase IC779_06185 PF02798 Glutathione S-transferase, N-terminal domain IC779_06185 PF00043 Glutathione S-transferase, C-terminal domain IC779_06195 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_06195 PF13192 Thioredoxin domain IC779_06215 PF00487 Fatty acid desaturase IC779_06225 PF00578 AhpC/TSA family IC779_06225 PF10417 C-terminal domain of 1-Cys peroxiredoxin IC779_06230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IC779_06230 PF00271 Helicase conserved C-terminal domain IC779_06230 PF04408 Helicase associated domain (HA2) IC779_06230 PF11898 Domain of unknown function (DUF3418) IC779_06230 PF00270 DEAD/DEAH box helicase IC779_06235 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IC779_06235 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IC779_06250 PF07690 Major Facilitator Superfamily IC779_06255 PF03594 Benzoate membrane transport protein IC779_06260 PF00106 short chain dehydrogenase IC779_06265 PF00175 Oxidoreductase NAD-binding domain IC779_06265 PF00970 Oxidoreductase FAD-binding domain IC779_06265 PF00111 2Fe-2S iron-sulfur cluster binding domain IC779_06270 PF00866 Ring hydroxylating beta subunit IC779_06275 PF00355 Rieske [2Fe-2S] domain IC779_06275 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC779_06285 PF03466 LysR substrate binding domain IC779_06285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_06295 PF00111 2Fe-2S iron-sulfur cluster binding domain IC779_06295 PF00970 Oxidoreductase FAD-binding domain IC779_06295 PF00175 Oxidoreductase NAD-binding domain IC779_06305 PF04945 YHS domain IC779_06305 PF02332 Methane/Phenol/Toluene Hydroxylase IC779_06310 PF02406 MmoB/DmpM family IC779_06315 PF02332 Methane/Phenol/Toluene Hydroxylase IC779_06320 PF06099 Phenol hydroxylase subunit IC779_06330 PF00158 Sigma-54 interaction domain IC779_06330 PF02954 Bacterial regulatory protein, Fis family IC779_06330 PF06505 Activator of aromatic catabolism IC779_06330 PF02830 V4R domain IC779_06340 PF00403 Heavy-metal-associated domain IC779_06345 PF00376 MerR family regulatory protein IC779_06345 PF09278 MerR, DNA binding IC779_06380 PF02601 Exonuclease VII, large subunit IC779_06380 PF13742 OB-fold nucleic acid binding domain IC779_06415 PF01810 LysE type translocator IC779_06420 PF00313 'Cold-shock' DNA-binding domain IC779_06430 PF14748 Pyrroline-5-carboxylate reductase dimerisation IC779_06430 PF03807 NADP oxidoreductase coenzyme F420-dependent IC779_06450 PF07690 Major Facilitator Superfamily IC779_06455 PF01638 HxlR-like helix-turn-helix IC779_06460 PF00248 Aldo/keto reductase family IC779_06475 PF09190 DALR domain IC779_06475 PF01406 tRNA synthetases class I (C) catalytic domain IC779_06480 PF01380 SIS domain IC779_06480 PF00571 CBS domain IC779_06495 PF03968 OstA-like protein IC779_06500 PF12399 Branched-chain amino acid ATP-binding cassette transporter IC779_06500 PF00005 ABC transporter IC779_06505 PF02321 Outer membrane efflux protein IC779_06510 PF00005 ABC transporter IC779_06510 PF00664 ABC transporter transmembrane region IC779_06510 PF03412 Peptidase C39 family IC779_06515 PF13533 Biotin-lipoyl like IC779_06515 PF13533 Biotin-lipoyl like IC779_06520 PF01205 Uncharacterized protein family UPF0029 IC779_06525 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_06535 PF01596 O-methyltransferase IC779_06545 PF00037 4Fe-4S binding domain IC779_06545 PF11953 Domain of unknown function (DUF3470) IC779_06555 PF01624 MutS domain I IC779_06555 PF05188 MutS domain II IC779_06555 PF05192 MutS domain III IC779_06555 PF05190 MutS family domain IV IC779_06555 PF00488 MutS domain V IC779_06560 PF03466 LysR substrate binding domain IC779_06560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_06590 PF03707 Bacterial signalling protein N terminal repeat IC779_06590 PF00990 Diguanylate cyclase, GGDEF domain IC779_06590 PF00563 EAL domain IC779_06600 PF03279 Bacterial lipid A biosynthesis acyltransferase IC779_06610 PF01979 Amidohydrolase family IC779_06620 PF02649 Type I GTP cyclohydrolase folE2 IC779_06630 PF02322 Cytochrome bd terminal oxidase subunit II IC779_06635 PF01654 Cytochrome bd terminal oxidase subunit I IC779_06645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_06645 PF03466 LysR substrate binding domain IC779_06650 PF01979 Amidohydrolase family IC779_06665 PF07690 Major Facilitator Superfamily IC779_06685 PF07715 TonB-dependent Receptor Plug Domain IC779_06690 PF13302 Acetyltransferase (GNAT) domain IC779_06705 PF06865 Pyrimidine/purine nucleoside phosphorylase IC779_06710 PF01037 Lrp/AsnC ligand binding domain IC779_06710 PF13404 AsnC-type helix-turn-helix domain IC779_06720 PF00117 Glutamine amidotransferase class-I IC779_06725 PF00313 'Cold-shock' DNA-binding domain IC779_06730 PF16295 Tetracyclin repressor-like, C-terminal domain IC779_06730 PF00440 Bacterial regulatory proteins, tetR family IC779_06810 PF03527 RHS protein IC779_06810 PF05593 RHS Repeat IC779_06825 PF13936 Helix-turn-helix domain IC779_06825 PF00665 Integrase core domain IC779_06865 PF00202 Aminotransferase class-III IC779_06870 PF06629 MltA-interacting protein MipA IC779_06885 PF00892 EamA-like transporter family IC779_06915 PF05114 Protein of unknown function (DUF692) IC779_06925 PF08281 Sigma-70, region 4 IC779_06925 PF04542 Sigma-70 region 2 IC779_06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_06935 PF03466 LysR substrate binding domain IC779_06940 PF01566 Natural resistance-associated macrophage protein IC779_06945 PF03746 LamB/YcsF family IC779_06950 PF07286 Protein of unknown function (DUF1445) IC779_06960 PF00364 Biotin-requiring enzyme IC779_06960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC779_06960 PF02785 Biotin carboxylase C-terminal domain IC779_06960 PF00289 Biotin carboxylase, N-terminal domain IC779_06965 PF00654 Voltage gated chloride channel IC779_07010 PF13823 Alcohol dehydrogenase GroES-associated IC779_07010 PF08240 Alcohol dehydrogenase GroES-like domain IC779_07010 PF00107 Zinc-binding dehydrogenase IC779_07025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC779_07025 PF02785 Biotin carboxylase C-terminal domain IC779_07025 PF00289 Biotin carboxylase, N-terminal domain IC779_07030 PF02525 Flavodoxin-like fold IC779_07035 PF01638 HxlR-like helix-turn-helix IC779_07050 PF01402 Ribbon-helix-helix protein, copG family IC779_07050 PF08753 NikR C terminal nickel binding domain IC779_07055 PF01425 Amidase IC779_07060 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC779_07065 PF00005 ABC transporter IC779_07090 PF07690 Major Facilitator Superfamily IC779_07095 PF03466 LysR substrate binding domain IC779_07095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_07110 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IC779_07125 PF05947 Type VI secretion system, TssF IC779_07140 PF06744 Type VI secretion protein IcmF C-terminal IC779_07140 PF14331 ImcF-related N-terminal domain IC779_07140 PF06761 Intracellular multiplication and human macrophage-killing IC779_07150 PF01389 OmpA-like transmembrane domain IC779_07150 PF00691 OmpA family IC779_07160 PF07724 AAA domain (Cdc48 subfamily) IC779_07160 PF17871 AAA lid domain IC779_07160 PF10431 C-terminal, D2-small domain, of ClpB protein IC779_07160 PF00004 ATPase family associated with various cellular activities (AAA) IC779_07165 PF06812 ImpA, N-terminal, type VI secretion system IC779_07170 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IC779_07190 PF03466 LysR substrate binding domain IC779_07190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_07195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IC779_07200 PF07690 Major Facilitator Superfamily IC779_07215 PF00155 Aminotransferase class I and II IC779_07215 PF00392 Bacterial regulatory proteins, gntR family IC779_07220 PF02677 Epoxyqueuosine reductase QueH IC779_07230 PF00376 MerR family regulatory protein IC779_07230 PF09278 MerR, DNA binding IC779_07240 PF03315 Serine dehydratase beta chain IC779_07240 PF03313 Serine dehydratase alpha chain IC779_07245 PF00171 Aldehyde dehydrogenase family IC779_07245 PF01575 MaoC like domain IC779_07250 PF05138 Phenylacetic acid catabolic protein IC779_07255 PF06243 Phenylacetic acid degradation B IC779_07260 PF05138 Phenylacetic acid catabolic protein IC779_07265 PF01883 Iron-sulfur cluster assembly protein IC779_07270 PF00175 Oxidoreductase NAD-binding domain IC779_07270 PF00970 Oxidoreductase FAD-binding domain IC779_07270 PF00111 2Fe-2S iron-sulfur cluster binding domain IC779_07275 PF00378 Enoyl-CoA hydratase/isomerase IC779_07280 PF00378 Enoyl-CoA hydratase/isomerase IC779_07285 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IC779_07285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC779_07285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC779_07295 PF14535 AMP-binding enzyme C-terminal domain IC779_07295 PF00501 AMP-binding enzyme IC779_07300 PF08223 PaaX-like protein C-terminal domain IC779_07300 PF07848 PaaX-like protein IC779_07305 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_07310 PF03061 Thioesterase superfamily IC779_07320 PF00300 Histidine phosphatase superfamily (branch 1) IC779_07340 PF00182 Chitinase class I IC779_07390 PF00440 Bacterial regulatory proteins, tetR family IC779_07390 PF16295 Tetracyclin repressor-like, C-terminal domain IC779_07395 PF00202 Aminotransferase class-III IC779_07410 PF01636 Phosphotransferase enzyme family IC779_07415 PF13520 Amino acid permease IC779_07420 PF00199 Catalase IC779_07425 PF01292 Prokaryotic cytochrome b561 IC779_07440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_07440 PF03466 LysR substrate binding domain IC779_07445 PF02525 Flavodoxin-like fold IC779_07450 PF09339 IclR helix-turn-helix domain IC779_07450 PF01614 Bacterial transcriptional regulator IC779_07455 PF01494 FAD binding domain IC779_07460 PF00842 Alanine racemase, C-terminal domain IC779_07460 PF01168 Alanine racemase, N-terminal domain IC779_07465 PF07702 UTRA domain IC779_07465 PF00392 Bacterial regulatory proteins, gntR family IC779_07475 PF00005 ABC transporter IC779_07475 PF08402 TOBE domain IC779_07480 PF00528 Binding-protein-dependent transport system inner membrane component IC779_07485 PF01266 FAD dependent oxidoreductase IC779_07490 PF00266 Aminotransferase class-V IC779_07495 PF13419 Haloacid dehalogenase-like hydrolase IC779_07500 PF07690 Major Facilitator Superfamily IC779_07505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_07505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_07505 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_07510 PF02515 CoA-transferase family III IC779_07515 PF09339 IclR helix-turn-helix domain IC779_07520 PF00378 Enoyl-CoA hydratase/isomerase IC779_07525 PF03060 Nitronate monooxygenase IC779_07535 PF07690 Major Facilitator Superfamily IC779_07540 PF09339 IclR helix-turn-helix domain IC779_07545 PF00108 Thiolase, N-terminal domain IC779_07545 PF02803 Thiolase, C-terminal domain IC779_07550 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IC779_07550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC779_07550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC779_07560 PF00378 Enoyl-CoA hydratase/isomerase IC779_07565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_07565 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_07565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_07585 PF01144 Coenzyme A transferase IC779_07590 PF01144 Coenzyme A transferase IC779_07600 PF07690 Major Facilitator Superfamily IC779_07610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_07610 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_07610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_07610 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC779_07625 PF03466 LysR substrate binding domain IC779_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_07630 PF00682 HMGL-like IC779_07635 PF18140 Propionyl-coenzyme A carboxylase BT domain IC779_07635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC779_07635 PF00364 Biotin-requiring enzyme IC779_07635 PF00289 Biotin carboxylase, N-terminal domain IC779_07635 PF02785 Biotin carboxylase C-terminal domain IC779_07640 PF00378 Enoyl-CoA hydratase/isomerase IC779_07645 PF01039 Carboxyl transferase domain IC779_07650 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_07650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_07650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_07655 PF00440 Bacterial regulatory proteins, tetR family IC779_07660 PF00501 AMP-binding enzyme IC779_07660 PF13193 AMP-binding enzyme C-terminal domain IC779_07680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_07680 PF03466 LysR substrate binding domain IC779_07710 PF02464 Competence-damaged protein IC779_07710 PF18146 Damage-inducible protein CinA KH domain IC779_07710 PF00994 Probable molybdopterin binding domain IC779_07720 PF00199 Catalase IC779_07720 PF06628 Catalase-related immune-responsive IC779_07720 PF18011 C-terminal domain found in long catalases IC779_07745 PF00717 Peptidase S24-like IC779_07755 PF01037 Lrp/AsnC ligand binding domain IC779_07755 PF13404 AsnC-type helix-turn-helix domain IC779_07765 PF00072 Response regulator receiver domain IC779_07765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_07765 PF09308 LuxQ, periplasmic IC779_07765 PF00512 His Kinase A (phospho-acceptor) domain IC779_07770 PF00072 Response regulator receiver domain IC779_07775 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IC779_07785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_07785 PF03466 LysR substrate binding domain IC779_07790 PF07690 Major Facilitator Superfamily IC779_07805 PF00528 Binding-protein-dependent transport system inner membrane component IC779_07810 PF00528 Binding-protein-dependent transport system inner membrane component IC779_07815 PF00005 ABC transporter IC779_07820 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC779_07825 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC779_07830 PF03466 LysR substrate binding domain IC779_07830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_07835 PF01810 LysE type translocator IC779_07840 PF00266 Aminotransferase class-V IC779_07850 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_07855 PF00581 Rhodanese-like domain IC779_07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_07865 PF03466 LysR substrate binding domain IC779_07870 PF02798 Glutathione S-transferase, N-terminal domain IC779_07875 PF02798 Glutathione S-transferase, N-terminal domain IC779_07875 PF14834 Glutathione S-transferase, C-terminal domain IC779_07880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_07880 PF03466 LysR substrate binding domain IC779_07885 PF03788 LrgA family IC779_07890 PF04172 LrgB-like family IC779_07895 PF00155 Aminotransferase class I and II IC779_07895 PF00392 Bacterial regulatory proteins, gntR family IC779_07910 PF16957 Malonate decarboxylase, alpha subunit, transporter IC779_07915 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IC779_07920 PF06857 Malonate decarboxylase delta subunit (MdcD) IC779_07925 PF01039 Carboxyl transferase domain IC779_07935 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG IC779_07940 PF00698 Acyl transferase domain IC779_07955 PF03466 LysR substrate binding domain IC779_07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_07960 PF00155 Aminotransferase class I and II IC779_07960 PF00392 Bacterial regulatory proteins, gntR family IC779_07970 PF02322 Cytochrome bd terminal oxidase subunit II IC779_07975 PF01654 Cytochrome bd terminal oxidase subunit I IC779_07985 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC779_07985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_07985 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_07990 PF00296 Luciferase-like monooxygenase IC779_07995 PF00083 Sugar (and other) transporter IC779_08005 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IC779_08010 PF00005 ABC transporter IC779_08015 PF00528 Binding-protein-dependent transport system inner membrane component IC779_08020 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC779_08025 PF01177 Asp/Glu/Hydantoin racemase IC779_08030 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IC779_08040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_08040 PF03466 LysR substrate binding domain IC779_08050 PF13382 Adenine deaminase C-terminal domain IC779_08050 PF01979 Amidohydrolase family IC779_08060 PF03960 ArsC family IC779_08065 PF01022 Bacterial regulatory protein, arsR family IC779_08070 PF01758 Sodium Bile acid symporter family IC779_08075 PF03358 NADPH-dependent FMN reductase IC779_08080 PF03466 LysR substrate binding domain IC779_08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_08095 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_08095 PF13192 Thioredoxin domain IC779_08110 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_08115 PF00588 SpoU rRNA Methylase family IC779_08125 PF17763 Glutaminase/Asparaginase C-terminal domain IC779_08125 PF00710 Asparaginase, N-terminal IC779_08130 PF00375 Sodium:dicarboxylate symporter family IC779_08135 PF00155 Aminotransferase class I and II IC779_08140 PF01641 SelR domain IC779_08145 PF00255 Glutathione peroxidase IC779_08150 PF02311 AraC-like ligand binding domain IC779_08150 PF12833 Helix-turn-helix domain IC779_08160 PF00155 Aminotransferase class I and II IC779_08165 PF01966 HD domain IC779_08165 PF01909 Nucleotidyltransferase domain IC779_08165 PF08335 GlnD PII-uridylyltransferase IC779_08170 PF02222 ATP-grasp domain IC779_08185 PF03591 AzlC protein IC779_08210 PF01926 50S ribosome-binding GTPase IC779_08210 PF06071 Protein of unknown function (DUF933) IC779_08215 PF00528 Binding-protein-dependent transport system inner membrane component IC779_08220 PF00005 ABC transporter IC779_08220 PF09383 NIL domain IC779_08225 PF03180 NLPA lipoprotein IC779_08230 PF03180 NLPA lipoprotein IC779_08235 PF00296 Luciferase-like monooxygenase IC779_08245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_08245 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC779_08260 PF00528 Binding-protein-dependent transport system inner membrane component IC779_08265 PF00528 Binding-protein-dependent transport system inner membrane component IC779_08270 PF00005 ABC transporter IC779_08280 PF01037 Lrp/AsnC ligand binding domain IC779_08285 PF01709 Transcriptional regulator IC779_08295 PF00440 Bacterial regulatory proteins, tetR family IC779_08305 PF00196 Bacterial regulatory proteins, luxR family IC779_08305 PF03472 Autoinducer binding domain IC779_08325 PF03466 LysR substrate binding domain IC779_08325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_08335 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IC779_08345 PF00892 EamA-like transporter family IC779_08360 PF13953 PapC C-terminal domain IC779_08360 PF13954 PapC N-terminal domain IC779_08360 PF00577 Outer membrane usher protein IC779_08365 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IC779_08365 PF02753 Pili assembly chaperone PapD, C-terminal domain IC779_08370 PF16970 Type-1 fimbrial protein, A IC779_08385 PF04055 Radical SAM superfamily IC779_08385 PF06968 Biotin and Thiamin Synthesis associated domain IC779_08390 PF08331 Domain of unknown function (DUF1730) IC779_08395 PF01256 Carbohydrate kinase IC779_08395 PF03853 YjeF-related protein N-terminus IC779_08400 PF02075 Crossover junction endodeoxyribonuclease RuvC IC779_08430 PF02773 S-adenosylmethionine synthetase, C-terminal domain IC779_08430 PF00438 S-adenosylmethionine synthetase, N-terminal domain IC779_08430 PF02772 S-adenosylmethionine synthetase, central domain IC779_08435 PF02780 Transketolase, C-terminal domain IC779_08435 PF00456 Transketolase, thiamine diphosphate binding domain IC779_08435 PF02779 Transketolase, pyrimidine binding domain IC779_08450 PF04264 YceI-like domain IC779_08460 PF09992 Phosphodiester glycosidase IC779_08470 PF05958 tRNA (Uracil-5-)-methyltransferase IC779_08475 PF04229 GrpB protein IC779_08480 PF01619 Proline dehydrogenase IC779_08480 PF14850 DNA-binding domain of Proline dehydrogenase IC779_08480 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IC779_08480 PF00171 Aldehyde dehydrogenase family IC779_08485 PF01037 Lrp/AsnC ligand binding domain IC779_08490 PF00474 Sodium:solute symporter family IC779_08495 PF02146 Sir2 family IC779_08500 PF01597 Glycine cleavage H-protein IC779_08505 PF12833 Helix-turn-helix domain IC779_08505 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC779_08515 PF00005 ABC transporter IC779_08515 PF00664 ABC transporter transmembrane region IC779_08520 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IC779_08525 PF06912 Protein of unknown function (DUF1275) IC779_08530 PF00375 Sodium:dicarboxylate symporter family IC779_08545 PF08007 Cupin superfamily protein IC779_08550 PF02545 Maf-like protein IC779_08560 PF00162 Phosphoglycerate kinase IC779_08570 PF01116 Fructose-bisphosphate aldolase class-II IC779_08580 PF04453 LPS transport system D IC779_08580 PF03968 OstA-like protein IC779_08585 PF01636 Phosphotransferase enzyme family IC779_08590 PF00483 Nucleotidyl transferase IC779_08595 PF02527 rRNA small subunit methyltransferase G IC779_08600 PF13614 AAA domain IC779_08605 PF02195 ParB-like nuclease domain IC779_08605 PF17762 HTH domain found in ParB protein IC779_08610 PF01618 MotA/TolQ/ExbB proton channel family IC779_08620 PF00664 ABC transporter transmembrane region IC779_08620 PF00005 ABC transporter IC779_08630 PF02348 Cytidylyltransferase IC779_08635 PF09115 DNA polymerase III, delta subunit, C terminal IC779_08645 PF01026 TatD related DNase IC779_08660 PF02501 Type II secretion system (T2SS), protein I IC779_08660 PF07963 Prokaryotic N-terminal methylation motif IC779_08665 PF07963 Prokaryotic N-terminal methylation motif IC779_08665 PF11612 Type II secretion system (T2SS), protein J IC779_08670 PF03934 Type II secretion system (T2SS), protein K IC779_08680 PF03167 Uracil DNA glycosylase superfamily IC779_08700 PF02224 Cytidylate kinase IC779_08705 PF00575 S1 RNA binding domain IC779_08710 PF00216 Bacterial DNA-binding protein IC779_08720 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IC779_08725 PF03956 Lysine exporter LysO IC779_08730 PF00743 Flavin-binding monooxygenase-like IC779_08740 PF03969 AFG1-like ATPase IC779_08745 PF02899 Phage integrase, N-terminal SAM-like domain IC779_08745 PF00589 Phage integrase family IC779_08790 PF01726 LexA DNA binding domain IC779_08790 PF00717 Peptidase S24-like IC779_08805 PF03796 DnaB-like helicase C terminal domain IC779_08805 PF00772 DnaB-like helicase N terminal domain IC779_08885 PF04860 Phage portal protein IC779_09005 PF01274 Malate synthase IC779_09015 PF02472 Biopolymer transport protein ExbD/TolR IC779_09020 PF02472 Biopolymer transport protein ExbD/TolR IC779_09025 PF01618 MotA/TolQ/ExbB proton channel family IC779_09030 PF03544 Gram-negative bacterial TonB protein C-terminal IC779_09035 PF07715 TonB-dependent Receptor Plug Domain IC779_09035 PF00593 TonB dependent receptor IC779_09055 PF00528 Binding-protein-dependent transport system inner membrane component IC779_09060 PF00528 Binding-protein-dependent transport system inner membrane component IC779_09065 PF00005 ABC transporter IC779_09065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC779_09080 PF00459 Inositol monophosphatase family IC779_09090 PF01649 Ribosomal protein S20 IC779_09095 PF13460 NAD(P)H-binding IC779_09100 PF03737 Aldolase/RraA IC779_09120 PF17757 UvrB interaction domain IC779_09120 PF02559 CarD-like/TRCF domain IC779_09120 PF03461 TRCF domain IC779_09120 PF00271 Helicase conserved C-terminal domain IC779_09120 PF00270 DEAD/DEAH box helicase IC779_09130 PF00211 Adenylate and Guanylate cyclase catalytic domain IC779_09135 PF00111 2Fe-2S iron-sulfur cluster binding domain IC779_09140 PF00012 Hsp70 protein IC779_09145 PF00226 DnaJ domain IC779_09145 PF07743 HSCB C-terminal oligomerisation domain IC779_09150 PF01521 Iron-sulphur cluster biosynthesis IC779_09155 PF01592 NifU-like N terminal domain IC779_09160 PF00266 Aminotransferase class-V IC779_09165 PF02082 Transcriptional regulator IC779_09180 PF00216 Bacterial DNA-binding protein IC779_09185 PF09312 SurA N-terminal domain IC779_09185 PF00639 PPIC-type PPIASE domain IC779_09190 PF12852 Cupin IC779_09190 PF12833 Helix-turn-helix domain IC779_09195 PF00487 Fatty acid desaturase IC779_09200 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_09200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_09200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_09205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_09205 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_09205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_09210 PF03109 ABC1 family IC779_09220 PF04073 Aminoacyl-tRNA editing domain IC779_09225 PF13419 Haloacid dehalogenase-like hydrolase IC779_09235 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IC779_09240 PF02277 Phosphoribosyltransferase IC779_09245 PF00300 Histidine phosphatase superfamily (branch 1) IC779_09255 PF02654 Cobalamin-5-phosphate synthase IC779_09260 PF00793 DAHP synthetase I family IC779_09265 PF01925 Sulfite exporter TauE/SafE IC779_09285 PF00593 TonB dependent receptor IC779_09285 PF07715 TonB-dependent Receptor Plug Domain IC779_09290 PF02684 Lipid-A-disaccharide synthetase IC779_09300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC779_09305 PF00005 ABC transporter IC779_09340 PF01230 HIT domain IC779_09365 PF08241 Methyltransferase domain IC779_09375 PF01053 Cys/Met metabolism PLP-dependent enzyme IC779_09385 PF02575 YbaB/EbfC DNA-binding family IC779_09390 PF02132 RecR protein IC779_09390 PF13662 Toprim domain IC779_09395 PF01612 3'-5' exonuclease IC779_09395 PF00570 HRDC domain IC779_09415 PF05166 YcgL domain IC779_09425 PF17862 AAA+ lid domain IC779_09425 PF00004 ATPase family associated with various cellular activities (AAA) IC779_09425 PF01434 Peptidase family M41 IC779_09435 PF00291 Pyridoxal-phosphate dependent enzyme IC779_09440 PF05175 Methyltransferase small domain IC779_09445 PF01264 Chorismate synthase IC779_09450 PF00990 Diguanylate cyclase, GGDEF domain IC779_09450 PF05230 MASE2 domain IC779_09465 PF04055 Radical SAM superfamily IC779_09470 PF00676 Dehydrogenase E1 component IC779_09475 PF02780 Transketolase, C-terminal domain IC779_09475 PF02779 Transketolase, pyrimidine binding domain IC779_09480 PF00364 Biotin-requiring enzyme IC779_09480 PF02817 e3 binding domain IC779_09480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC779_09485 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_09485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC779_09490 PF00106 short chain dehydrogenase IC779_09495 PF00107 Zinc-binding dehydrogenase IC779_09495 PF08240 Alcohol dehydrogenase GroES-like domain IC779_09500 PF01062 Bestrophin, RFP-TM, chloride channel IC779_09505 PF02954 Bacterial regulatory protein, Fis family IC779_09505 PF00158 Sigma-54 interaction domain IC779_09505 PF00072 Response regulator receiver domain IC779_09510 PF04273 Putative phosphatase (DUF442) IC779_09510 PF00753 Metallo-beta-lactamase superfamily IC779_09515 PF00753 Metallo-beta-lactamase superfamily IC779_09515 PF04273 Putative phosphatase (DUF442) IC779_09520 PF01925 Sulfite exporter TauE/SafE IC779_09535 PF06445 GyrI-like small molecule binding domain IC779_09535 PF12833 Helix-turn-helix domain IC779_09545 PF00083 Sugar (and other) transporter IC779_09550 PF07715 TonB-dependent Receptor Plug Domain IC779_09550 PF00593 TonB dependent receptor IC779_09555 PF10415 Fumarase C C-terminus IC779_09555 PF00206 Lyase IC779_09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_09570 PF03466 LysR substrate binding domain IC779_09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_09575 PF03466 LysR substrate binding domain IC779_09580 PF02803 Thiolase, C-terminal domain IC779_09580 PF00108 Thiolase, N-terminal domain IC779_09585 PF02667 Short chain fatty acid transporter IC779_09590 PF01144 Coenzyme A transferase IC779_09595 PF01144 Coenzyme A transferase IC779_09600 PF03466 LysR substrate binding domain IC779_09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_09625 PF07690 Major Facilitator Superfamily IC779_09655 PF00753 Metallo-beta-lactamase superfamily IC779_09670 PF06719 AraC-type transcriptional regulator N-terminus IC779_09670 PF12833 Helix-turn-helix domain IC779_09675 PF07690 Major Facilitator Superfamily IC779_09685 PF01738 Dienelactone hydrolase family IC779_09700 PF01613 Flavin reductase like domain IC779_09710 PF12833 Helix-turn-helix domain IC779_09710 PF14525 AraC-binding-like domain IC779_09715 PF00970 Oxidoreductase FAD-binding domain IC779_09715 PF00175 Oxidoreductase NAD-binding domain IC779_09715 PF00111 2Fe-2S iron-sulfur cluster binding domain IC779_09720 PF00866 Ring hydroxylating beta subunit IC779_09725 PF00355 Rieske [2Fe-2S] domain IC779_09725 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC779_09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_09730 PF03459 TOBE domain IC779_09740 PF00528 Binding-protein-dependent transport system inner membrane component IC779_09745 PF03459 TOBE domain IC779_09745 PF00005 ABC transporter IC779_09760 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IC779_09760 PF01648 4'-phosphopantetheinyl transferase superfamily IC779_09765 PF05977 Transmembrane secretion effector IC779_09770 PF00501 AMP-binding enzyme IC779_09770 PF00668 Condensation domain IC779_09770 PF00550 Phosphopantetheine attachment site IC779_09770 PF00975 Thioesterase domain IC779_09770 PF13193 AMP-binding enzyme C-terminal domain IC779_09775 PF03621 MbtH-like protein IC779_09785 PF00106 short chain dehydrogenase IC779_09790 PF00425 chorismate binding enzyme IC779_09795 PF13193 AMP-binding enzyme C-terminal domain IC779_09795 PF00501 AMP-binding enzyme IC779_09800 PF00857 Isochorismatase family IC779_09800 PF00550 Phosphopantetheine attachment site IC779_09805 PF00873 AcrB/AcrD/AcrF family IC779_09810 PF07715 TonB-dependent Receptor Plug Domain IC779_09810 PF00593 TonB dependent receptor IC779_09820 PF00149 Calcineurin-like phosphoesterase IC779_09825 PF13090 Polyphosphate kinase C-terminal domain 2 IC779_09825 PF02503 Polyphosphate kinase middle domain IC779_09825 PF17941 Polyphosphate kinase C-terminal domain 1 IC779_09825 PF13089 Polyphosphate kinase N-terminal domain IC779_09830 PF08042 PqqA family IC779_09835 PF12706 Beta-lactamase superfamily domain IC779_09840 PF03070 TENA/THI-4/PQQC family IC779_09845 PF05402 Coenzyme PQQ synthesis protein D (PqqD) IC779_09850 PF13186 Iron-sulfur cluster-binding domain IC779_09850 PF04055 Radical SAM superfamily IC779_09855 PF01244 Membrane dipeptidase (Peptidase family M19) IC779_09870 PF00873 AcrB/AcrD/AcrF family IC779_09875 PF00529 HlyD membrane-fusion protein of T1SS IC779_09875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC779_09880 PF00072 Response regulator receiver domain IC779_09880 PF00486 Transcriptional regulatory protein, C terminal IC779_09885 PF00512 His Kinase A (phospho-acceptor) domain IC779_09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_09885 PF00672 HAMP domain IC779_09895 PF13091 PLD-like domain IC779_09900 PF02548 Ketopantoate hydroxymethyltransferase IC779_09910 PF00199 Catalase IC779_09920 PF08240 Alcohol dehydrogenase GroES-like domain IC779_09920 PF00107 Zinc-binding dehydrogenase IC779_09930 PF00419 Fimbrial protein IC779_09935 PF13954 PapC N-terminal domain IC779_09935 PF00577 Outer membrane usher protein IC779_09935 PF13953 PapC C-terminal domain IC779_09940 PF02753 Pili assembly chaperone PapD, C-terminal domain IC779_09940 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IC779_09945 PF16970 Type-1 fimbrial protein, A IC779_09965 PF00296 Luciferase-like monooxygenase IC779_09970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IC779_09975 PF00528 Binding-protein-dependent transport system inner membrane component IC779_09980 PF12911 N-terminal TM domain of oligopeptide transport permease C IC779_09980 PF00528 Binding-protein-dependent transport system inner membrane component IC779_09985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC779_09985 PF00005 ABC transporter IC779_09990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_09990 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC779_09990 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_10000 PF00664 ABC transporter transmembrane region IC779_10000 PF00005 ABC transporter IC779_10005 PF00005 ABC transporter IC779_10005 PF00664 ABC transporter transmembrane region IC779_10015 PF00593 TonB dependent receptor IC779_10015 PF07715 TonB-dependent Receptor Plug Domain IC779_10025 PF00296 Luciferase-like monooxygenase IC779_10030 PF00158 Sigma-54 interaction domain IC779_10035 PF00902 Sec-independent protein translocase protein (TatC) IC779_10040 PF02416 mttA/Hcf106 family IC779_10045 PF02416 mttA/Hcf106 family IC779_10050 PF00005 ABC transporter IC779_10055 PF00528 Binding-protein-dependent transport system inner membrane component IC779_10060 PF00528 Binding-protein-dependent transport system inner membrane component IC779_10065 PF09084 NMT1/THI5 like IC779_10070 PF00296 Luciferase-like monooxygenase IC779_10075 PF03544 Gram-negative bacterial TonB protein C-terminal IC779_10080 PF01618 MotA/TolQ/ExbB proton channel family IC779_10085 PF02472 Biopolymer transport protein ExbD/TolR IC779_10090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IC779_10100 PF07715 TonB-dependent Receptor Plug Domain IC779_10100 PF00593 TonB dependent receptor IC779_10105 PF00296 Luciferase-like monooxygenase IC779_10110 PF00528 Binding-protein-dependent transport system inner membrane component IC779_10115 PF00005 ABC transporter IC779_10120 PF03544 Gram-negative bacterial TonB protein C-terminal IC779_10125 PF01618 MotA/TolQ/ExbB proton channel family IC779_10130 PF02472 Biopolymer transport protein ExbD/TolR IC779_10140 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC779_10150 PF07715 TonB-dependent Receptor Plug Domain IC779_10150 PF00593 TonB dependent receptor IC779_10155 PF00296 Luciferase-like monooxygenase IC779_10160 PF00248 Aldo/keto reductase family IC779_10165 PF00593 TonB dependent receptor IC779_10165 PF07715 TonB-dependent Receptor Plug Domain IC779_10170 PF00884 Sulfatase IC779_10175 PF13545 Crp-like helix-turn-helix domain IC779_10175 PF00027 Cyclic nucleotide-binding domain IC779_10180 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC779_10235 PF04607 Region found in RelA / SpoT proteins IC779_10235 PF13291 ACT domain IC779_10235 PF02824 TGS domain IC779_10260 PF07690 Major Facilitator Superfamily IC779_10265 PF13533 Biotin-lipoyl like IC779_10270 PF01425 Amidase IC779_10275 PF00665 Integrase core domain IC779_10275 PF13936 Helix-turn-helix domain IC779_10300 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IC779_10305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IC779_10305 PF14572 Phosphoribosyl synthetase-associated domain IC779_10325 PF00005 ABC transporter IC779_10330 PF01032 FecCD transport family IC779_10340 PF00264 Common central domain of tyrosinase IC779_10345 PF07732 Multicopper oxidase IC779_10345 PF07731 Multicopper oxidase IC779_10360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC779_10360 PF00529 HlyD membrane-fusion protein of T1SS IC779_10370 PF07690 Major Facilitator Superfamily IC779_10375 PF01557 Fumarylacetoacetate (FAA) hydrolase family IC779_10380 PF13417 Glutathione S-transferase, N-terminal domain IC779_10385 PF01494 FAD binding domain IC779_10390 PF07883 Cupin domain IC779_10395 PF03466 LysR substrate binding domain IC779_10395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_10400 PF00392 Bacterial regulatory proteins, gntR family IC779_10400 PF07702 UTRA domain IC779_10415 PF07690 Major Facilitator Superfamily IC779_10480 PF00440 Bacterial regulatory proteins, tetR family IC779_10480 PF08359 YsiA-like protein, C-terminal region IC779_10485 PF12706 Beta-lactamase superfamily domain IC779_10495 PF00376 MerR family regulatory protein IC779_10495 PF09278 MerR, DNA binding IC779_10505 PF01872 RibD C-terminal domain IC779_10510 PF00106 short chain dehydrogenase IC779_10515 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_10515 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC779_10520 PF00561 alpha/beta hydrolase fold IC779_10535 PF03466 LysR substrate binding domain IC779_10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_10540 PF13378 Enolase C-terminal domain-like IC779_10540 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IC779_10545 PF02426 Muconolactone delta-isomerase IC779_10550 PF04444 Catechol dioxygenase N terminus IC779_10550 PF00775 Dioxygenase IC779_10555 PF01144 Coenzyme A transferase IC779_10560 PF01144 Coenzyme A transferase IC779_10565 PF02803 Thiolase, C-terminal domain IC779_10565 PF00108 Thiolase, N-terminal domain IC779_10570 PF12146 Serine aminopeptidase, S33 IC779_10575 PF00171 Aldehyde dehydrogenase family IC779_10580 PF05199 GMC oxidoreductase IC779_10580 PF00732 GMC oxidoreductase IC779_10590 PF01179 Copper amine oxidase, enzyme domain IC779_10590 PF07833 Copper amine oxidase N-terminal domain IC779_10590 PF02727 Copper amine oxidase, N2 domain IC779_10590 PF02728 Copper amine oxidase, N3 domain IC779_10595 PF12833 Helix-turn-helix domain IC779_10595 PF02311 AraC-like ligand binding domain IC779_10600 PF01613 Flavin reductase like domain IC779_10620 PF00355 Rieske [2Fe-2S] domain IC779_10620 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC779_10635 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC779_10640 PF01425 Amidase IC779_10650 PF07690 Major Facilitator Superfamily IC779_10660 PF00106 short chain dehydrogenase IC779_10675 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_10675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_10675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_10680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_10680 PF03466 LysR substrate binding domain IC779_10685 PF09339 IclR helix-turn-helix domain IC779_10685 PF01614 Bacterial transcriptional regulator IC779_10690 PF00753 Metallo-beta-lactamase superfamily IC779_10700 PF04143 Sulphur transport IC779_10710 PF01011 PQQ enzyme repeat IC779_10710 PF13360 PQQ-like domain IC779_10715 PF04966 Carbohydrate-selective porin, OprB family IC779_10720 PF05048 Periplasmic copper-binding protein (NosD) IC779_10725 PF01487 Type I 3-dehydroquinase IC779_10730 PF00775 Dioxygenase IC779_10735 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IC779_10735 PF00775 Dioxygenase IC779_10740 PF02627 Carboxymuconolactone decarboxylase family IC779_10745 PF07690 Major Facilitator Superfamily IC779_10750 PF00561 alpha/beta hydrolase fold IC779_10755 PF10397 Adenylosuccinate lyase C-terminus IC779_10755 PF00206 Lyase IC779_10760 PF02803 Thiolase, C-terminal domain IC779_10760 PF00108 Thiolase, N-terminal domain IC779_10765 PF01144 Coenzyme A transferase IC779_10770 PF01144 Coenzyme A transferase IC779_10775 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IC779_10780 PF04977 Septum formation initiator IC779_10790 PF04239 Protein of unknown function (DUF421) IC779_10795 PF03952 Enolase, N-terminal domain IC779_10795 PF00113 Enolase, C-terminal TIM barrel domain IC779_10800 PF00793 DAHP synthetase I family IC779_10805 PF06418 CTP synthase N-terminus IC779_10805 PF00117 Glutamine amidotransferase class-I IC779_10835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC779_10835 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_10850 PF00793 DAHP synthetase I family IC779_10855 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IC779_10860 PF00004 ATPase family associated with various cellular activities (AAA) IC779_10860 PF17871 AAA lid domain IC779_10860 PF02861 Clp amino terminal domain, pathogenicity island component IC779_10860 PF10431 C-terminal, D2-small domain, of ClpB protein IC779_10860 PF07724 AAA domain (Cdc48 subfamily) IC779_10865 PF02617 ATP-dependent Clp protease adaptor protein ClpS IC779_10875 PF02774 Semialdehyde dehydrogenase, dimerisation domain IC779_10875 PF01118 Semialdehyde dehydrogenase, NAD binding domain IC779_10890 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IC779_10895 PF00585 C-terminal regulatory domain of Threonine dehydratase IC779_10895 PF00291 Pyridoxal-phosphate dependent enzyme IC779_10900 PF02254 TrkA-N domain IC779_10900 PF02080 TrkA-C domain IC779_10905 PF02386 Cation transport protein IC779_10910 PF02253 Phospholipase A1 IC779_10915 PF05193 Peptidase M16 inactive domain IC779_10915 PF08367 Peptidase M16C associated IC779_10915 PF00675 Insulinase (Peptidase family M16) IC779_10920 PF07715 TonB-dependent Receptor Plug Domain IC779_10920 PF00593 TonB dependent receptor IC779_10925 PF00294 pfkB family carbohydrate kinase IC779_10935 PF07290 Protein of unknown function (DUF1449) IC779_10945 PF01654 Cytochrome bd terminal oxidase subunit I IC779_10950 PF02322 Cytochrome bd terminal oxidase subunit II IC779_10955 PF08173 Membrane bound YbgT-like protein IC779_10980 PF02881 SRP54-type protein, helical bundle domain IC779_10980 PF00448 SRP54-type protein, GTPase domain IC779_11005 PF00571 CBS domain IC779_11010 PF00202 Aminotransferase class-III IC779_11015 PF00462 Glutaredoxin IC779_11025 PF03466 LysR substrate binding domain IC779_11025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_11030 PF00557 Metallopeptidase family M24 IC779_11035 PF05525 Branched-chain amino acid transport protein IC779_11060 PF00381 PTS HPr component phosphorylation site IC779_11060 PF02896 PEP-utilising enzyme, TIM barrel domain IC779_11060 PF00391 PEP-utilising enzyme, mobile domain IC779_11060 PF05524 PEP-utilising enzyme, N-terminal IC779_11060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IC779_11065 PF00294 pfkB family carbohydrate kinase IC779_11070 PF02378 Phosphotransferase system, EIIC IC779_11070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IC779_11095 PF13936 Helix-turn-helix domain IC779_11095 PF00665 Integrase core domain IC779_11110 PF07995 Glucose / Sorbosone dehydrogenase IC779_11115 PF01740 STAS domain IC779_11115 PF00916 Sulfate permease family IC779_11130 PF00324 Amino acid permease IC779_11135 PF00266 Aminotransferase class-V IC779_11140 PF01037 Lrp/AsnC ligand binding domain IC779_11155 PF13419 Haloacid dehalogenase-like hydrolase IC779_11160 PF01479 S4 domain IC779_11165 PF00154 recA bacterial DNA recombination protein IC779_11170 PF02631 RecX family IC779_11185 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IC779_11185 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_11190 PF07977 FabA-like domain IC779_11195 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_11195 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IC779_11205 PF01103 Surface antigen IC779_11205 PF07244 Surface antigen variable number repeat IC779_11210 PF02163 Peptidase family M50 IC779_11210 PF17820 PDZ domain IC779_11210 PF13180 PDZ domain IC779_11215 PF13288 DXP reductoisomerase C-terminal domain IC779_11215 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IC779_11215 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IC779_11225 PF01255 Putative undecaprenyl diphosphate synthase IC779_11230 PF01765 Ribosome recycling factor IC779_11235 PF00696 Amino acid kinase family IC779_11240 PF00919 Uncharacterized protein family UPF0004 IC779_11240 PF04055 Radical SAM superfamily IC779_11240 PF18693 TRAM domain IC779_11250 PF00989 PAS fold IC779_11250 PF00512 His Kinase A (phospho-acceptor) domain IC779_11250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_11255 PF00072 Response regulator receiver domain IC779_11255 PF00158 Sigma-54 interaction domain IC779_11255 PF02954 Bacterial regulatory protein, Fis family IC779_11260 PF00440 Bacterial regulatory proteins, tetR family IC779_11265 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IC779_11265 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IC779_11275 PF02542 YgbB family IC779_11285 PF01266 FAD dependent oxidoreductase IC779_11305 PF00206 Lyase IC779_11305 PF10415 Fumarase C C-terminus IC779_11310 PF16363 GDP-mannose 4,6 dehydratase IC779_11315 PF02635 DsrE/DsrF-like family IC779_11335 PF00892 EamA-like transporter family IC779_11340 PF00392 Bacterial regulatory proteins, gntR family IC779_11340 PF00155 Aminotransferase class I and II IC779_11345 PF01638 HxlR-like helix-turn-helix IC779_11350 PF03453 MoeA N-terminal region (domain I and II) IC779_11350 PF00994 Probable molybdopterin binding domain IC779_11350 PF03454 MoeA C-terminal region (domain IV) IC779_11355 PF01967 MoaC family IC779_11355 PF00994 Probable molybdopterin binding domain IC779_11360 PF02391 MoaE protein IC779_11370 PF06463 Molybdenum Cofactor Synthesis C IC779_11370 PF04055 Radical SAM superfamily IC779_11375 PF01568 Molydopterin dinucleotide binding domain IC779_11375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IC779_11375 PF00384 Molybdopterin oxidoreductase IC779_11380 PF12804 MobA-like NTP transferase domain IC779_11385 PF01568 Molydopterin dinucleotide binding domain IC779_11385 PF00384 Molybdopterin oxidoreductase IC779_11385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IC779_11385 PF04324 BFD-like [2Fe-2S] binding domain IC779_11390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IC779_11390 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_11390 PF04324 BFD-like [2Fe-2S] binding domain IC779_11390 PF18267 Rubredoxin NAD+ reductase C-terminal domain IC779_11390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IC779_11395 PF13806 Rieske-like [2Fe-2S] domain IC779_11395 PF04324 BFD-like [2Fe-2S] binding domain IC779_11395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IC779_11395 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_11395 PF18267 Rubredoxin NAD+ reductase C-terminal domain IC779_11395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IC779_11405 PF00486 Transcriptional regulatory protein, C terminal IC779_11405 PF00072 Response regulator receiver domain IC779_11410 PF00005 ABC transporter IC779_11420 PF13438 Domain of unknown function (DUF4113) IC779_11420 PF00817 impB/mucB/samB family IC779_11420 PF11799 impB/mucB/samB family C-terminal domain IC779_11425 PF01220 Dehydroquinase class II IC779_11430 PF00364 Biotin-requiring enzyme IC779_11435 PF02785 Biotin carboxylase C-terminal domain IC779_11435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC779_11435 PF00289 Biotin carboxylase, N-terminal domain IC779_11465 PF13954 PapC N-terminal domain IC779_11465 PF13953 PapC C-terminal domain IC779_11465 PF00577 Outer membrane usher protein IC779_11490 PF01645 Conserved region in glutamate synthase IC779_11515 PF01565 FAD binding domain IC779_11515 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IC779_11520 PF01451 Low molecular weight phosphotyrosine protein phosphatase IC779_11530 PF01638 HxlR-like helix-turn-helix IC779_11535 PF00857 Isochorismatase family IC779_11545 PF00465 Iron-containing alcohol dehydrogenase IC779_11550 PF03061 Thioesterase superfamily IC779_11555 PF05506 Domain of unknown function (DUF756) IC779_11555 PF04185 Phosphoesterase family IC779_11560 PF12170 DNA polymerase III tau subunit V interacting with alpha IC779_11560 PF12169 DNA polymerase III subunits gamma and tau domain III IC779_11560 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IC779_11575 PF07690 Major Facilitator Superfamily IC779_11585 PF00144 Beta-lactamase IC779_11590 PF01575 MaoC like domain IC779_11600 PF02803 Thiolase, C-terminal domain IC779_11600 PF00108 Thiolase, N-terminal domain IC779_11610 PF03466 LysR substrate binding domain IC779_11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_11615 PF00923 Transaldolase/Fructose-6-phosphate aldolase IC779_11620 PF01810 LysE type translocator IC779_11625 PF01037 Lrp/AsnC ligand binding domain IC779_11630 PF03594 Benzoate membrane transport protein IC779_11635 PF02308 MgtC family IC779_11655 PF00582 Universal stress protein family IC779_11660 PF16326 ABC transporter C-terminal domain IC779_11660 PF00005 ABC transporter IC779_11660 PF12848 ABC transporter IC779_11705 PF00924 Mechanosensitive ion channel IC779_11715 PF00291 Pyridoxal-phosphate dependent enzyme IC779_11720 PF02423 Ornithine cyclodeaminase/mu-crystallin family IC779_11725 PF04183 IucA / IucC family IC779_11725 PF06276 Ferric iron reductase FhuF-like transporter IC779_11730 PF07690 Major Facilitator Superfamily IC779_11735 PF06276 Ferric iron reductase FhuF-like transporter IC779_11735 PF04183 IucA / IucC family IC779_11740 PF03328 HpcH/HpaI aldolase/citrate lyase family IC779_11745 PF00593 TonB dependent receptor IC779_11745 PF07715 TonB-dependent Receptor Plug Domain IC779_11775 PF00665 Integrase core domain IC779_11775 PF13936 Helix-turn-helix domain IC779_11780 PF01037 Lrp/AsnC ligand binding domain IC779_11785 PF01817 Chorismate mutase type II IC779_11800 PF02798 Glutathione S-transferase, N-terminal domain IC779_11815 PF13954 PapC N-terminal domain IC779_11815 PF00577 Outer membrane usher protein IC779_11815 PF13953 PapC C-terminal domain IC779_11830 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IC779_11830 PF01433 Peptidase family M1 domain IC779_11830 PF11940 Domain of unknown function (DUF3458) Ig-like fold IC779_11845 PF02110 Hydroxyethylthiazole kinase family IC779_11850 PF06445 GyrI-like small molecule binding domain IC779_11860 PF14493 Helix-turn-helix domain IC779_11860 PF05970 PIF1-like helicase IC779_11865 PF00465 Iron-containing alcohol dehydrogenase IC779_11880 PF00171 Aldehyde dehydrogenase family IC779_11885 PF13520 Amino acid permease IC779_11890 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IC779_11895 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IC779_11900 PF00117 Glutamine amidotransferase class-I IC779_11900 PF00958 GMP synthase C terminal domain IC779_11900 PF02540 NAD synthase IC779_11905 PF00749 tRNA synthetases class I (E and Q), catalytic domain IC779_11905 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IC779_11910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IC779_11915 PF00149 Calcineurin-like phosphoesterase IC779_11925 PF00881 Nitroreductase family IC779_11935 PF17209 Hfq protein IC779_11945 PF08676 MutL C terminal dimerisation domain IC779_11945 PF01119 DNA mismatch repair protein, C-terminal domain IC779_11950 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IC779_11955 PF01479 S4 domain IC779_11955 PF00849 RNA pseudouridylate synthase IC779_11970 PF00849 RNA pseudouridylate synthase IC779_11970 PF01479 S4 domain IC779_11980 PF04284 Protein of unknown function (DUF441) IC779_11985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_11985 PF03466 LysR substrate binding domain IC779_11995 PF07690 Major Facilitator Superfamily IC779_12000 PF00027 Cyclic nucleotide-binding domain IC779_12000 PF00520 Ion transport protein IC779_12010 PF11791 Aconitate B N-terminal domain IC779_12010 PF06434 Aconitate hydratase 2 N-terminus IC779_12010 PF00330 Aconitase family (aconitate hydratase) IC779_12030 PF17243 POTRA domain TamA domain 1 IC779_12030 PF01103 Surface antigen IC779_12030 PF07244 Surface antigen variable number repeat IC779_12035 PF07690 Major Facilitator Superfamily IC779_12040 PF03232 Ubiquinone biosynthesis protein COQ7 IC779_12050 PF00120 Glutamine synthetase, catalytic domain IC779_12055 PF00486 Transcriptional regulatory protein, C terminal IC779_12055 PF00072 Response regulator receiver domain IC779_12060 PF02702 Osmosensitive K+ channel His kinase sensor domain IC779_12060 PF00512 His Kinase A (phospho-acceptor) domain IC779_12060 PF13493 Domain of unknown function (DUF4118) IC779_12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_12065 PF02669 K+-transporting ATPase, c chain IC779_12075 PF03814 Potassium-transporting ATPase A subunit IC779_12090 PF03109 ABC1 family IC779_12095 PF00899 ThiF family IC779_12100 PF01613 Flavin reductase like domain IC779_12105 PF13193 AMP-binding enzyme C-terminal domain IC779_12105 PF00501 AMP-binding enzyme IC779_12110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_12110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_12110 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_12115 PF00106 short chain dehydrogenase IC779_12120 PF12833 Helix-turn-helix domain IC779_12125 PF09084 NMT1/THI5 like IC779_12130 PF00528 Binding-protein-dependent transport system inner membrane component IC779_12135 PF13847 Methyltransferase domain IC779_12135 PF17827 PrmC N-terminal domain IC779_12140 PF03462 PCRF domain IC779_12140 PF00472 RF-1 domain IC779_12155 PF00296 Luciferase-like monooxygenase IC779_12165 PF13994 PgaD-like protein IC779_12170 PF00535 Glycosyl transferase family 2 IC779_12175 PF01522 Polysaccharide deacetylase IC779_12175 PF14883 Hypothetical glycosyl hydrolase family 13 IC779_12185 PF03618 Kinase/pyrophosphorylase IC779_12190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IC779_12190 PF02896 PEP-utilising enzyme, TIM barrel domain IC779_12190 PF00391 PEP-utilising enzyme, mobile domain IC779_12200 PF06481 COX Aromatic Rich Motif IC779_12200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IC779_12205 PF00115 Cytochrome C and Quinol oxidase polypeptide I IC779_12210 PF00510 Cytochrome c oxidase subunit III IC779_12215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IC779_12220 PF01040 UbiA prenyltransferase family IC779_12225 PF01250 Ribosomal protein S6 IC779_12230 PF01084 Ribosomal protein S18 IC779_12235 PF01281 Ribosomal protein L9, N-terminal domain IC779_12235 PF03948 Ribosomal protein L9, C-terminal domain IC779_12240 PF00772 DnaB-like helicase N terminal domain IC779_12240 PF03796 DnaB-like helicase C terminal domain IC779_12245 PF00842 Alanine racemase, C-terminal domain IC779_12245 PF01168 Alanine racemase, N-terminal domain IC779_12255 PF08379 Bacterial transglutaminase-like N-terminal region IC779_12255 PF01841 Transglutaminase-like superfamily IC779_12265 PF14403 Circularly permuted ATP-grasp type 2 IC779_12295 PF02954 Bacterial regulatory protein, Fis family IC779_12300 PF02142 MGS-like domain IC779_12300 PF01808 AICARFT/IMPCHase bienzyme IC779_12305 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IC779_12305 PF02843 Phosphoribosylglycinamide synthetase, C domain IC779_12305 PF02844 Phosphoribosylglycinamide synthetase, N domain IC779_12310 PF03180 NLPA lipoprotein IC779_12315 PF00005 ABC transporter IC779_12315 PF09383 NIL domain IC779_12320 PF00528 Binding-protein-dependent transport system inner membrane component IC779_12325 PF16123 Hydroxyacylglutathione hydrolase C-terminus IC779_12325 PF00753 Metallo-beta-lactamase superfamily IC779_12335 PF00375 Sodium:dicarboxylate symporter family IC779_12355 PF07995 Glucose / Sorbosone dehydrogenase IC779_12380 PF03601 Conserved hypothetical protein 698 IC779_12395 PF07690 Major Facilitator Superfamily IC779_12400 PF05853 beta-keto acid cleavage enzyme IC779_12405 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC779_12410 PF00107 Zinc-binding dehydrogenase IC779_12410 PF08240 Alcohol dehydrogenase GroES-like domain IC779_12430 PF00072 Response regulator receiver domain IC779_12430 PF00486 Transcriptional regulatory protein, C terminal IC779_12435 PF08521 Two-component sensor kinase N-terminal IC779_12435 PF00512 His Kinase A (phospho-acceptor) domain IC779_12435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_12475 PF00672 HAMP domain IC779_12475 PF00512 His Kinase A (phospho-acceptor) domain IC779_12475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_12480 PF00072 Response regulator receiver domain IC779_12480 PF00486 Transcriptional regulatory protein, C terminal IC779_12490 PF00576 HIUase/Transthyretin family IC779_12500 PF02470 MlaD protein IC779_12505 PF04403 Paraquat-inducible protein A IC779_12515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_12515 PF03466 LysR substrate binding domain IC779_12530 PF02080 TrkA-C domain IC779_12530 PF06826 Predicted Permease Membrane Region IC779_12535 PF00155 Aminotransferase class I and II IC779_12545 PF02805 Metal binding domain of Ada IC779_12545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IC779_12545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IC779_12545 PF12833 Helix-turn-helix domain IC779_12555 PF00440 Bacterial regulatory proteins, tetR family IC779_12635 PF02254 TrkA-N domain IC779_12635 PF00999 Sodium/hydrogen exchanger family IC779_12640 PF03616 Sodium/glutamate symporter IC779_12645 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC779_12645 PF12833 Helix-turn-helix domain IC779_12650 PF01370 NAD dependent epimerase/dehydratase family IC779_12660 PF00561 alpha/beta hydrolase fold IC779_12670 PF00743 Flavin-binding monooxygenase-like IC779_12680 PF03466 LysR substrate binding domain IC779_12680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_12685 PF00857 Isochorismatase family IC779_12735 PF00324 Amino acid permease IC779_12740 PF00171 Aldehyde dehydrogenase family IC779_12745 PF00202 Aminotransferase class-III IC779_12750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_12750 PF03466 LysR substrate binding domain IC779_12790 PF03793 PASTA domain IC779_12790 PF00069 Protein kinase domain IC779_12810 PF00814 Glycoprotease family IC779_12815 PF01165 Ribosomal protein S21 IC779_12820 PF09424 Yqey-like protein IC779_12825 PF01435 Peptidase family M48 IC779_12830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IC779_12830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IC779_12845 PF00156 Phosphoribosyl transferase domain IC779_12855 PF01180 Dihydroorotate dehydrogenase IC779_12875 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IC779_12875 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IC779_12880 PF00881 Nitroreductase family IC779_12890 PF00271 Helicase conserved C-terminal domain IC779_12890 PF00270 DEAD/DEAH box helicase IC779_12895 PF00313 'Cold-shock' DNA-binding domain IC779_12905 PF04542 Sigma-70 region 2 IC779_12905 PF04545 Sigma-70, region 4 IC779_12905 PF00140 Sigma-70 factor, region 1.2 IC779_12910 PF04241 Protein of unknown function (DUF423) IC779_12920 PF05690 Thiazole biosynthesis protein ThiG IC779_12925 PF03883 Peroxide stress protein YaaA IC779_12935 PF06956 Regulator of RNA terminal phosphate cyclase IC779_12935 PF00158 Sigma-54 interaction domain IC779_12940 PF00753 Metallo-beta-lactamase superfamily IC779_12945 PF01139 tRNA-splicing ligase RtcB IC779_12960 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain IC779_12960 PF01137 RNA 3'-terminal phosphate cyclase IC779_12965 PF01546 Peptidase family M20/M25/M40 IC779_12965 PF07687 Peptidase dimerisation domain IC779_12970 PF03781 Sulfatase-modifying factor enzyme 1 IC779_12980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IC779_12985 PF00800 Prephenate dehydratase IC779_12985 PF01817 Chorismate mutase type II IC779_12985 PF01842 ACT domain IC779_13000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_13000 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_13000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_13005 PF00375 Sodium:dicarboxylate symporter family IC779_13010 PF00591 Glycosyl transferase family, a/b domain IC779_13010 PF02885 Glycosyl transferase family, helical bundle domain IC779_13015 PF07023 Protein of unknown function (DUF1315) IC779_13020 PF01513 ATP-NAD kinase IC779_13025 PF00905 Penicillin binding protein transpeptidase domain IC779_13025 PF14814 Bifunctional transglycosylase second domain IC779_13025 PF00912 Transglycosylase IC779_13035 PF00293 NUDIX domain IC779_13045 PF08521 Two-component sensor kinase N-terminal IC779_13045 PF00512 His Kinase A (phospho-acceptor) domain IC779_13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_13050 PF00486 Transcriptional regulatory protein, C terminal IC779_13050 PF00072 Response regulator receiver domain IC779_13070 PF18389 TrmO C-terminal domain IC779_13070 PF01980 tRNA-methyltransferase O IC779_13075 PF00970 Oxidoreductase FAD-binding domain IC779_13075 PF00175 Oxidoreductase NAD-binding domain IC779_13080 PF02567 Phenazine biosynthesis-like protein IC779_13085 PF00155 Aminotransferase class I and II IC779_13085 PF00392 Bacterial regulatory proteins, gntR family IC779_13090 PF01136 Peptidase family U32 IC779_13090 PF16325 Peptidase family U32 C-terminal domain IC779_13095 PF00037 4Fe-4S binding domain IC779_13100 PF00893 Small Multidrug Resistance protein IC779_13105 PF00005 ABC transporter IC779_13110 PF00528 Binding-protein-dependent transport system inner membrane component IC779_13115 PF00528 Binding-protein-dependent transport system inner membrane component IC779_13120 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC779_13125 PF03466 LysR substrate binding domain IC779_13125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_13130 PF13533 Biotin-lipoyl like IC779_13135 PF00873 AcrB/AcrD/AcrF family IC779_13140 PF02321 Outer membrane efflux protein IC779_13145 PF00464 Serine hydroxymethyltransferase IC779_13170 PF00005 ABC transporter IC779_13175 PF01061 ABC-2 type transporter IC779_13180 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IC779_13180 PF14489 QueF-like protein IC779_13190 PF01098 Cell cycle protein IC779_13195 PF13406 Transglycosylase SLT domain IC779_13200 PF03330 Lytic transglycolase IC779_13200 PF05036 Sporulation related domain IC779_13220 PF12833 Helix-turn-helix domain IC779_13230 PF00889 Elongation factor TS IC779_13235 PF00318 Ribosomal protein S2 IC779_13240 PF00557 Metallopeptidase family M24 IC779_13250 PF07690 Major Facilitator Superfamily IC779_13260 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_13260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC779_13265 PF04055 Radical SAM superfamily IC779_13270 PF09317 Domain of unknown function (DUF1974) IC779_13270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_13270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_13285 PF05221 S-adenosyl-L-homocysteine hydrolase IC779_13285 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IC779_13290 PF02219 Methylenetetrahydrofolate reductase IC779_13295 PF04452 RNA methyltransferase IC779_13300 PF03707 Bacterial signalling protein N terminal repeat IC779_13300 PF00990 Diguanylate cyclase, GGDEF domain IC779_13300 PF00563 EAL domain IC779_13305 PF01515 Phosphate acetyl/butaryl transferase IC779_13305 PF03949 Malic enzyme, NAD binding domain IC779_13305 PF00390 Malic enzyme, N-terminal domain IC779_13310 PF12627 Probable RNA and SrmB- binding site of polymerase A IC779_13310 PF01743 Poly A polymerase head domain IC779_13315 PF13180 PDZ domain IC779_13320 PF01784 NIF3 (NGG1p interacting factor 3) IC779_13325 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IC779_13325 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IC779_13360 PF01040 UbiA prenyltransferase family IC779_13365 PF04345 Chorismate lyase IC779_13370 PF03951 Glutamine synthetase, beta-Grasp domain IC779_13370 PF00120 Glutamine synthetase, catalytic domain IC779_13375 PF00854 POT family IC779_13385 PF00117 Glutamine amidotransferase class-I IC779_13390 PF02885 Glycosyl transferase family, helical bundle domain IC779_13390 PF00591 Glycosyl transferase family, a/b domain IC779_13395 PF00218 Indole-3-glycerol phosphate synthase IC779_13400 PF01713 Smr domain IC779_13410 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IC779_13410 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IC779_13415 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IC779_13415 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IC779_13415 PF01799 [2Fe-2S] binding domain IC779_13415 PF00111 2Fe-2S iron-sulfur cluster binding domain IC779_13420 PF01227 GTP cyclohydrolase I IC779_13425 PF00144 Beta-lactamase IC779_13440 PF05675 Protein of unknown function (DUF817) IC779_13445 PF01208 Uroporphyrinogen decarboxylase (URO-D) IC779_13455 PF02678 Pirin IC779_13455 PF17954 Quercetinase C-terminal cupin domain IC779_13465 PF01757 Acyltransferase family IC779_13470 PF00665 Integrase core domain IC779_13470 PF13936 Helix-turn-helix domain IC779_13480 PF13309 HTH domain IC779_13480 PF08348 YheO-like PAS domain IC779_13485 PF00291 Pyridoxal-phosphate dependent enzyme IC779_13495 PF02789 Cytosol aminopeptidase family, N-terminal domain IC779_13495 PF00883 Cytosol aminopeptidase family, catalytic domain IC779_13515 PF03466 LysR substrate binding domain IC779_13515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_13520 PF09828 Chromate resistance exported protein IC779_13525 PF02417 Chromate transporter IC779_13535 PF07690 Major Facilitator Superfamily IC779_13555 PF02705 K+ potassium transporter IC779_13565 PF04328 Selenoprotein, putative IC779_13570 PF02554 Carbon starvation protein CstA IC779_13570 PF13722 5TM C-terminal transporter carbon starvation CstA IC779_13575 PF09285 Elongation factor P, C-terminal IC779_13575 PF01132 Elongation factor P (EF-P) OB domain IC779_13575 PF08207 Elongation factor P (EF-P) KOW-like domain IC779_13580 PF04055 Radical SAM superfamily IC779_13590 PF12792 CSS motif domain associated with EAL IC779_13590 PF00563 EAL domain IC779_13595 PF01197 Ribosomal protein L31 IC779_13600 PF13593 SBF-like CPA transporter family (DUF4137) IC779_13605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC779_13610 PF07690 Major Facilitator Superfamily IC779_13615 PF13654 AAA domain IC779_13615 PF05362 Lon protease (S16) C-terminal proteolytic domain IC779_13620 PF03466 LysR substrate binding domain IC779_13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_13625 PF01476 LysM domain IC779_13625 PF01551 Peptidase family M23 IC779_13630 PF01975 Survival protein SurE IC779_13645 PF07943 Penicillin-binding protein 5, C-terminal domain IC779_13645 PF00768 D-alanyl-D-alanine carboxypeptidase IC779_13650 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_13655 PF00293 NUDIX domain IC779_13665 PF04356 Protein of unknown function (DUF489) IC779_13670 PF08328 Adenylosuccinate lyase C-terminal IC779_13670 PF00206 Lyase IC779_13675 PF09997 Predicted membrane protein (DUF2238) IC779_13695 PF00005 ABC transporter IC779_13700 PF00528 Binding-protein-dependent transport system inner membrane component IC779_13705 PF00528 Binding-protein-dependent transport system inner membrane component IC779_13710 PF12849 PBP superfamily domain IC779_13715 PF00324 Amino acid permease IC779_13720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC779_13720 PF00205 Thiamine pyrophosphate enzyme, central domain IC779_13720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC779_13725 PF01037 Lrp/AsnC ligand binding domain IC779_13730 PF00171 Aldehyde dehydrogenase family IC779_13735 PF00282 Pyridoxal-dependent decarboxylase conserved domain IC779_13740 PF00202 Aminotransferase class-III IC779_13760 PF00487 Fatty acid desaturase IC779_13765 PF00970 Oxidoreductase FAD-binding domain IC779_13765 PF00111 2Fe-2S iron-sulfur cluster binding domain IC779_13765 PF00175 Oxidoreductase NAD-binding domain IC779_13770 PF00440 Bacterial regulatory proteins, tetR family IC779_13780 PF00176 SNF2 family N-terminal domain IC779_13780 PF18339 RapA N-terminal Tudor like domain 1 IC779_13780 PF12137 RNA polymerase recycling family C-terminal IC779_13780 PF00271 Helicase conserved C-terminal domain IC779_13780 PF18337 RapA N-terminal Tudor like domain IC779_13785 PF00849 RNA pseudouridylate synthase IC779_13795 PF00202 Aminotransferase class-III IC779_13800 PF02581 Thiamine monophosphate synthase IC779_13825 PF00675 Insulinase (Peptidase family M16) IC779_13825 PF05193 Peptidase M16 inactive domain IC779_13830 PF02567 Phenazine biosynthesis-like protein IC779_13835 PF00375 Sodium:dicarboxylate symporter family IC779_13840 PF03466 LysR substrate binding domain IC779_13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_13845 PF06779 Uncharacterised MFS-type transporter YbfB IC779_13915 PF01551 Peptidase family M23 IC779_13915 PF10145 Phage-related minor tail protein IC779_13915 PF01464 Transglycosylase SLT domain IC779_14025 PF03592 Terminase small subunit IC779_14025 PF10668 Phage terminase small subunit IC779_14075 PF00149 Calcineurin-like phosphoesterase IC779_14115 PF00772 DnaB-like helicase N terminal domain IC779_14115 PF03796 DnaB-like helicase C terminal domain IC779_14210 PF00180 Isocitrate/isopropylmalate dehydrogenase IC779_14215 PF00849 RNA pseudouridylate synthase IC779_14220 PF03971 Monomeric isocitrate dehydrogenase IC779_14230 PF00768 D-alanyl-D-alanine carboxypeptidase IC779_14230 PF07943 Penicillin-binding protein 5, C-terminal domain IC779_14240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC779_14245 PF03441 FAD binding domain of DNA photolyase IC779_14245 PF00875 DNA photolyase IC779_14275 PF02350 UDP-N-acetylglucosamine 2-epimerase IC779_14290 PF03060 Nitronate monooxygenase IC779_14295 PF01207 Dihydrouridine synthase (Dus) IC779_14300 PF07759 Protein of unknown function (DUF1615) IC779_14310 PF00696 Amino acid kinase family IC779_14310 PF01472 PUA domain IC779_14315 PF01018 GTP1/OBG IC779_14315 PF01926 50S ribosome-binding GTPase IC779_14330 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IC779_14330 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IC779_14345 PF02151 UvrB/uvrC motif IC779_14345 PF04851 Type III restriction enzyme, res subunit IC779_14345 PF17757 UvrB interaction domain IC779_14345 PF12344 Ultra-violet resistance protein B IC779_14345 PF00271 Helicase conserved C-terminal domain IC779_14350 PF00990 Diguanylate cyclase, GGDEF domain IC779_14360 PF17151 Periplasmic sensor domain IC779_14360 PF00990 Diguanylate cyclase, GGDEF domain IC779_14370 PF00155 Aminotransferase class I and II IC779_14395 PF00106 short chain dehydrogenase IC779_14400 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IC779_14405 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IC779_14410 PF11967 Recombination protein O N terminal IC779_14410 PF02565 Recombination protein O C terminal IC779_14420 PF01926 50S ribosome-binding GTPase IC779_14420 PF07650 KH domain IC779_14425 PF14622 Ribonuclease-III-like IC779_14425 PF00035 Double-stranded RNA binding motif IC779_14435 PF10502 Signal peptidase, peptidase S26 IC779_14440 PF00679 Elongation factor G C-terminus IC779_14440 PF00009 Elongation factor Tu GTP binding domain IC779_14440 PF03144 Elongation factor Tu domain 2 IC779_14440 PF06421 GTP-binding protein LepA C-terminus IC779_14450 PF13180 PDZ domain IC779_14455 PF02910 Fumarate reductase flavoprotein C-term IC779_14455 PF00890 FAD binding domain IC779_14465 PF02223 Thymidylate kinase IC779_14470 PF02618 YceG-like family IC779_14475 PF01063 Amino-transferase class IV IC779_14490 PF00528 Binding-protein-dependent transport system inner membrane component IC779_14495 PF00528 Binding-protein-dependent transport system inner membrane component IC779_14500 PF12857 TOBE-like domain IC779_14500 PF00005 ABC transporter IC779_14505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_14505 PF03466 LysR substrate binding domain IC779_14515 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_14515 PF14602 Hexapeptide repeat of succinyl-transferase IC779_14515 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IC779_14520 PF04055 Radical SAM superfamily IC779_14525 PF06508 Queuosine biosynthesis protein QueC IC779_14535 PF06508 Queuosine biosynthesis protein QueC IC779_14540 PF00578 AhpC/TSA family IC779_14555 PF01467 Cytidylyltransferase-like IC779_14555 PF00293 NUDIX domain IC779_14560 PF00378 Enoyl-CoA hydratase/isomerase IC779_14565 PF01784 NIF3 (NGG1p interacting factor 3) IC779_14580 PF07690 Major Facilitator Superfamily IC779_14585 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IC779_14585 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IC779_14585 PF02769 AIR synthase related protein, C-terminal domain IC779_14590 PF01966 HD domain IC779_14600 PF01330 RuvA N terminal domain IC779_14600 PF07499 RuvA, C-terminal domain IC779_14605 PF05491 RuvB C-terminal winged helix domain IC779_14605 PF05496 Holliday junction DNA helicase RuvB P-loop domain IC779_14605 PF17864 RuvB AAA lid domain IC779_14610 PF07687 Peptidase dimerisation domain IC779_14610 PF01546 Peptidase family M20/M25/M40 IC779_14615 PF03061 Thioesterase superfamily IC779_14620 PF01618 MotA/TolQ/ExbB proton channel family IC779_14625 PF02472 Biopolymer transport protein ExbD/TolR IC779_14635 PF07676 WD40-like Beta Propeller Repeat IC779_14635 PF04052 TolB amino-terminal domain IC779_14640 PF00691 OmpA family IC779_14650 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IC779_14655 PF00588 SpoU rRNA Methylase family IC779_14655 PF08032 RNA 2'-O ribose methyltransferase substrate binding IC779_14685 PF00308 Bacterial dnaA protein IC779_14685 PF08299 Bacterial dnaA protein helix-turn-helix IC779_14685 PF11638 DnaA N-terminal domain IC779_14690 PF01594 AI-2E family transporter IC779_14695 PF02769 AIR synthase related protein, C-terminal domain IC779_14695 PF00586 AIR synthase related protein, N-terminal domain IC779_14700 PF00551 Formyl transferase IC779_14705 PF12697 Alpha/beta hydrolase family IC779_14710 PF01343 Peptidase family S49 IC779_14710 PF06965 Na+/H+ antiporter 1 IC779_14720 PF00753 Metallo-beta-lactamase superfamily IC779_14720 PF13567 Domain of unknown function (DUF4131) IC779_14720 PF03772 Competence protein IC779_14725 PF00005 ABC transporter IC779_14730 PF02687 FtsX-like permease family IC779_14730 PF12704 MacB-like periplasmic core domain IC779_14740 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IC779_14755 PF00266 Aminotransferase class-V IC779_14765 PF13533 Biotin-lipoyl like IC779_14785 PF00535 Glycosyl transferase family 2 IC779_14795 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IC779_14800 PF03989 DNA gyrase C-terminal domain, beta-propeller IC779_14800 PF00521 DNA gyrase/topoisomerase IV, subunit A IC779_14805 PF00753 Metallo-beta-lactamase superfamily IC779_14805 PF16123 Hydroxyacylglutathione hydrolase C-terminus IC779_14815 PF01012 Electron transfer flavoprotein domain IC779_14815 PF00766 Electron transfer flavoprotein FAD-binding domain IC779_14820 PF01012 Electron transfer flavoprotein domain IC779_14825 PF00589 Phage integrase family IC779_14825 PF02899 Phage integrase, N-terminal SAM-like domain IC779_14830 PF01810 LysE type translocator IC779_14840 PF01678 Diaminopimelate epimerase IC779_14845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IC779_14845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IC779_14855 PF00324 Amino acid permease IC779_14860 PF01235 Sodium:alanine symporter family IC779_14865 PF18073 Rubredoxin metal binding domain IC779_14875 PF00152 tRNA synthetases class II (D, K and N) IC779_14880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IC779_14880 PF11890 Domain of unknown function (DUF3410) IC779_14880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IC779_14920 PF00216 Bacterial DNA-binding protein IC779_14985 PF10502 Signal peptidase, peptidase S26 IC779_15015 PF11985 Protein of unknown function (DUF3486) IC779_15020 PF03237 Terminase-like family IC779_15030 PF06074 Protein of unknown function (DUF935) IC779_15035 PF04233 Phage Mu protein F like protein IC779_15055 PF10124 Mu-like prophage major head subunit gpT IC779_15145 PF02634 FdhD/NarQ family IC779_15150 PF00384 Molybdopterin oxidoreductase IC779_15155 PF02595 Glycerate kinase family IC779_15170 PF00881 Nitroreductase family IC779_15175 PF00873 AcrB/AcrD/AcrF family IC779_15180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC779_15180 PF00529 HlyD membrane-fusion protein of T1SS IC779_15200 PF00171 Aldehyde dehydrogenase family IC779_15205 PF05199 GMC oxidoreductase IC779_15205 PF00732 GMC oxidoreductase IC779_15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_15210 PF03466 LysR substrate binding domain IC779_15220 PF00561 alpha/beta hydrolase fold IC779_15225 PF00561 alpha/beta hydrolase fold IC779_15225 PF00364 Biotin-requiring enzyme IC779_15230 PF00364 Biotin-requiring enzyme IC779_15230 PF00561 alpha/beta hydrolase fold IC779_15235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC779_15240 PF00440 Bacterial regulatory proteins, tetR family IC779_15300 PF09857 Putative toxin of bacterial toxin-antitoxin pair IC779_15320 PF00501 AMP-binding enzyme IC779_15320 PF13193 AMP-binding enzyme C-terminal domain IC779_15320 PF00668 Condensation domain IC779_15320 PF00550 Phosphopantetheine attachment site IC779_15320 PF00975 Thioesterase domain IC779_15325 PF02321 Outer membrane efflux protein IC779_15330 PF00873 AcrB/AcrD/AcrF family IC779_15335 PF00873 AcrB/AcrD/AcrF family IC779_15340 PF13533 Biotin-lipoyl like IC779_15355 PF09339 IclR helix-turn-helix domain IC779_15360 PF02515 CoA-transferase family III IC779_15365 PF02803 Thiolase, C-terminal domain IC779_15365 PF00108 Thiolase, N-terminal domain IC779_15370 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IC779_15370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC779_15370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC779_15375 PF00378 Enoyl-CoA hydratase/isomerase IC779_15380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_15380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_15380 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_15390 PF00743 Flavin-binding monooxygenase-like IC779_15425 PF08240 Alcohol dehydrogenase GroES-like domain IC779_15425 PF00107 Zinc-binding dehydrogenase IC779_15430 PF07859 alpha/beta hydrolase fold IC779_15445 PF03449 Transcription elongation factor, N-terminal IC779_15445 PF01272 Transcription elongation factor, GreA/GreB, C-term IC779_15485 PF10544 T5orf172 domain IC779_15500 PF07693 KAP family P-loop domain IC779_15525 PF01555 DNA methylase IC779_15545 PF01272 Transcription elongation factor, GreA/GreB, C-term IC779_15545 PF03449 Transcription elongation factor, N-terminal IC779_15570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IC779_15570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IC779_15575 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC779_15575 PF01464 Transglycosylase SLT domain IC779_15590 PF01464 Transglycosylase SLT domain IC779_15595 PF01435 Peptidase family M48 IC779_15605 PF00873 AcrB/AcrD/AcrF family IC779_15610 PF03009 Glycerophosphoryl diester phosphodiesterase family IC779_15615 PF00753 Metallo-beta-lactamase superfamily IC779_15620 PF01219 Prokaryotic diacylglycerol kinase IC779_15625 PF00118 TCP-1/cpn60 chaperonin family IC779_15630 PF00166 Chaperonin 10 Kd subunit IC779_15640 PF00781 Diacylglycerol kinase catalytic domain IC779_15645 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain IC779_15645 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain IC779_15650 PF01266 FAD dependent oxidoreductase IC779_15650 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IC779_15655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IC779_15655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IC779_15660 PF00083 Sugar (and other) transporter IC779_15675 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IC779_15675 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IC779_15690 PF16655 PhoD-like phosphatase, N-terminal domain IC779_15690 PF09423 PhoD-like phosphatase IC779_15710 PF00809 Pterin binding enzyme IC779_15715 PF06480 FtsH Extracellular IC779_15715 PF00004 ATPase family associated with various cellular activities (AAA) IC779_15715 PF17862 AAA+ lid domain IC779_15715 PF01434 Peptidase family M41 IC779_15720 PF01728 FtsJ-like methyltransferase IC779_15725 PF01985 CRS1 / YhbY (CRM) domain IC779_15740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IC779_15740 PF00117 Glutamine amidotransferase class-I IC779_15745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC779_15745 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IC779_15745 PF02142 MGS-like domain IC779_15750 PF03449 Transcription elongation factor, N-terminal IC779_15750 PF01272 Transcription elongation factor, GreA/GreB, C-term IC779_15755 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_15760 PF00582 Universal stress protein family IC779_15775 PF00999 Sodium/hydrogen exchanger family IC779_15780 PF04228 Putative neutral zinc metallopeptidase IC779_15785 PF05661 Protein of unknown function (DUF808) IC779_15790 PF00579 tRNA synthetases class I (W and Y) IC779_15795 PF00549 CoA-ligase IC779_15795 PF02629 CoA binding domain IC779_15800 PF08442 ATP-grasp domain IC779_15800 PF00549 CoA-ligase IC779_15805 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_15805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC779_15810 PF00364 Biotin-requiring enzyme IC779_15810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC779_15810 PF02817 e3 binding domain IC779_15815 PF02779 Transketolase, pyrimidine binding domain IC779_15815 PF16078 2-oxoglutarate dehydrogenase N-terminus IC779_15815 PF16870 2-oxoglutarate dehydrogenase C-terminal IC779_15815 PF00676 Dehydrogenase E1 component IC779_15830 PF13085 2Fe-2S iron-sulfur cluster binding domain IC779_15835 PF00890 FAD binding domain IC779_15835 PF02910 Fumarate reductase flavoprotein C-term IC779_15840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IC779_15845 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IC779_15850 PF00285 Citrate synthase, C-terminal domain IC779_15860 PF17773 UPF0176 acylphosphatase like domain IC779_15860 PF00581 Rhodanese-like domain IC779_15875 PF00140 Sigma-70 factor, region 1.2 IC779_15875 PF04546 Sigma-70, non-essential region IC779_15875 PF04539 Sigma-70 region 3 IC779_15875 PF03979 Sigma-70 factor, region 1.1 IC779_15875 PF04545 Sigma-70, region 4 IC779_15875 PF04542 Sigma-70 region 2 IC779_15880 PF04359 Protein of unknown function (DUF493) IC779_15885 PF03099 Biotin/lipoate A/B protein ligase family IC779_15895 PF00465 Iron-containing alcohol dehydrogenase IC779_15900 PF13520 Amino acid permease IC779_15905 PF03358 NADPH-dependent FMN reductase IC779_15910 PF01638 HxlR-like helix-turn-helix IC779_15915 PF00588 SpoU rRNA Methylase family IC779_15920 PF14824 Sirohaem biosynthesis protein central IC779_15920 PF10414 Sirohaem synthase dimerisation region IC779_15920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IC779_15925 PF02403 Seryl-tRNA synthetase N-terminal domain IC779_15925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC779_15935 PF03548 Outer membrane lipoprotein carrier protein LolA IC779_15940 PF01016 Ribosomal L27 protein IC779_15945 PF00829 Ribosomal prokaryotic L21 protein IC779_15955 PF00348 Polyprenyl synthetase IC779_15965 PF01569 PAP2 superfamily IC779_15970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC779_15970 PF00529 HlyD membrane-fusion protein of T1SS IC779_15975 PF00873 AcrB/AcrD/AcrF family IC779_15980 PF02321 Outer membrane efflux protein IC779_15985 PF01906 Putative heavy-metal-binding IC779_15990 PF01906 Putative heavy-metal-binding IC779_16010 PF10458 Valyl tRNA synthetase tRNA binding arm IC779_16010 PF08264 Anticodon-binding domain of tRNA IC779_16010 PF00133 tRNA synthetases class I (I, L, M and V) IC779_16020 PF08264 Anticodon-binding domain of tRNA IC779_16020 PF00133 tRNA synthetases class I (I, L, M and V) IC779_16020 PF10458 Valyl tRNA synthetase tRNA binding arm IC779_16040 PF03466 LysR substrate binding domain IC779_16040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_16045 PF00909 Ammonium Transporter Family IC779_16055 PF08521 Two-component sensor kinase N-terminal IC779_16055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_16055 PF00512 His Kinase A (phospho-acceptor) domain IC779_16060 PF00486 Transcriptional regulatory protein, C terminal IC779_16060 PF00072 Response regulator receiver domain IC779_16065 PF08019 Phosphoethanolamine transferase EptA/EptB IC779_16065 PF00884 Sulfatase IC779_16085 PF01734 Patatin-like phospholipase IC779_16095 PF01145 SPFH domain / Band 7 family IC779_16100 PF04237 YjbR IC779_16105 PF00348 Polyprenyl synthetase IC779_16110 PF04303 PrpF protein IC779_16115 PF00324 Amino acid permease IC779_16120 PF00293 NUDIX domain IC779_16120 PF09297 NADH pyrophosphatase zinc ribbon domain IC779_16125 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IC779_16145 PF01965 DJ-1/PfpI family IC779_16150 PF00698 Acyl transferase domain IC779_16150 PF02801 Beta-ketoacyl synthase, C-terminal domain IC779_16150 PF14765 Polyketide synthase dehydratase IC779_16150 PF08659 KR domain IC779_16150 PF00109 Beta-ketoacyl synthase, N-terminal domain IC779_16150 PF16197 Ketoacyl-synthetase C-terminal extension IC779_16150 PF09277 Erythronolide synthase, docking IC779_16150 PF00550 Phosphopantetheine attachment site IC779_16150 PF08990 Erythronolide synthase docking IC779_16150 PF08240 Alcohol dehydrogenase GroES-like domain IC779_16155 PF06719 AraC-type transcriptional regulator N-terminus IC779_16155 PF12833 Helix-turn-helix domain IC779_16160 PF02673 Bacitracin resistance protein BacA IC779_16180 PF02525 Flavodoxin-like fold IC779_16195 PF01507 Phosphoadenosine phosphosulfate reductase family IC779_16200 PF06974 Protein of unknown function (DUF1298) IC779_16200 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IC779_16210 PF10150 Ribonuclease E/G family IC779_16210 PF00575 S1 RNA binding domain IC779_16215 PF02545 Maf-like protein IC779_16220 PF04093 rod shape-determining protein MreD IC779_16225 PF04085 rod shape-determining protein MreC IC779_16235 PF02686 Glu-tRNAGln amidotransferase C subunit IC779_16240 PF01425 Amidase IC779_16245 PF02934 GatB/GatE catalytic domain IC779_16245 PF02637 GatB domain IC779_16275 PF05992 SbmA/BacA-like family IC779_16280 PF13291 ACT domain IC779_16280 PF00291 Pyridoxal-phosphate dependent enzyme IC779_16285 PF01734 Patatin-like phospholipase IC779_16290 PF01235 Sodium:alanine symporter family IC779_16305 PF00881 Nitroreductase family IC779_16310 PF07690 Major Facilitator Superfamily IC779_16315 PF12805 FUSC-like inner membrane protein yccS IC779_16325 PF00175 Oxidoreductase NAD-binding domain IC779_16325 PF00258 Flavodoxin IC779_16325 PF00667 FAD binding domain IC779_16365 PF03734 L,D-transpeptidase catalytic domain IC779_16365 PF17969 L,D-transpeptidase C-terminal domain IC779_16370 PF04304 Protein of unknown function (DUF454) IC779_16385 PF01546 Peptidase family M20/M25/M40 IC779_16385 PF07687 Peptidase dimerisation domain IC779_16395 PF06969 HemN C-terminal domain IC779_16395 PF04055 Radical SAM superfamily IC779_16405 PF01584 CheW-like domain IC779_16405 PF00072 Response regulator receiver domain IC779_16405 PF01627 Hpt domain IC779_16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_16410 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IC779_16410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IC779_16415 PF01584 CheW-like domain IC779_16420 PF00072 Response regulator receiver domain IC779_16425 PF00072 Response regulator receiver domain IC779_16440 PF00873 AcrB/AcrD/AcrF family IC779_16445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC779_16445 PF03129 Anticodon binding domain IC779_16445 PF04073 Aminoacyl-tRNA editing domain IC779_16450 PF07411 Domain of unknown function (DUF1508) IC779_16455 PF03831 PhnA domain IC779_16455 PF08274 PhnA Zinc-Ribbon IC779_16460 PF04343 Protein of unknown function, DUF488 IC779_16465 PF12697 Alpha/beta hydrolase family IC779_16470 PF00881 Nitroreductase family IC779_16475 PF00296 Luciferase-like monooxygenase IC779_16480 PF00857 Isochorismatase family IC779_16485 PF01042 Endoribonuclease L-PSP IC779_16490 PF01613 Flavin reductase like domain IC779_16495 PF00860 Permease family IC779_16500 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IC779_16500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IC779_16510 PF01571 Aminomethyltransferase folate-binding domain IC779_16515 PF10411 Disulfide bond isomerase protein N-terminus IC779_16515 PF13098 Thioredoxin-like domain IC779_16525 PF03547 Membrane transport protein IC779_16530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC779_16535 PF00593 TonB dependent receptor IC779_16535 PF07715 TonB-dependent Receptor Plug Domain IC779_16540 PF02245 Methylpurine-DNA glycosylase (MPG) IC779_16545 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IC779_16545 PF06827 Zinc finger found in FPG and IleRS IC779_16545 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IC779_16560 PF01741 Large-conductance mechanosensitive channel, MscL IC779_16565 PF00679 Elongation factor G C-terminus IC779_16565 PF03144 Elongation factor Tu domain 2 IC779_16565 PF00009 Elongation factor Tu GTP binding domain IC779_16570 PF00860 Permease family IC779_16575 PF05175 Methyltransferase small domain IC779_16575 PF08468 Methyltransferase small domain N-terminal IC779_16580 PF00324 Amino acid permease IC779_16585 PF01139 tRNA-splicing ligase RtcB IC779_16595 PF00691 OmpA family IC779_16595 PF13505 Outer membrane protein beta-barrel domain IC779_16600 PF07963 Prokaryotic N-terminal methylation motif IC779_16600 PF00114 Pilin (bacterial filament) IC779_16605 PF00108 Thiolase, N-terminal domain IC779_16605 PF02803 Thiolase, C-terminal domain IC779_16620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IC779_16620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IC779_16625 PF01011 PQQ enzyme repeat IC779_16630 PF04966 Carbohydrate-selective porin, OprB family IC779_16635 PF02515 CoA-transferase family III IC779_16640 PF02311 AraC-like ligand binding domain IC779_16640 PF12833 Helix-turn-helix domain IC779_16645 PF02803 Thiolase, C-terminal domain IC779_16645 PF00108 Thiolase, N-terminal domain IC779_16650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC779_16650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC779_16650 PF00378 Enoyl-CoA hydratase/isomerase IC779_16665 PF13673 Acetyltransferase (GNAT) domain IC779_16675 PF03006 Haemolysin-III related IC779_16680 PF07690 Major Facilitator Superfamily IC779_16680 PF00083 Sugar (and other) transporter IC779_16690 PF07517 SecA DEAD-like domain IC779_16690 PF01043 SecA preprotein cross-linking domain IC779_16690 PF07516 SecA Wing and Scaffold domain IC779_16690 PF02810 SEC-C motif IC779_16695 PF00578 AhpC/TSA family IC779_16695 PF10417 C-terminal domain of 1-Cys peroxiredoxin IC779_16700 PF00753 Metallo-beta-lactamase superfamily IC779_16715 PF02875 Mur ligase family, glutamate ligase domain IC779_16715 PF08245 Mur ligase middle domain IC779_16720 PF01039 Carboxyl transferase domain IC779_16725 PF00290 Tryptophan synthase alpha chain IC779_16755 PF00291 Pyridoxal-phosphate dependent enzyme IC779_16760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IC779_16765 PF07715 TonB-dependent Receptor Plug Domain IC779_16765 PF00593 TonB dependent receptor IC779_16770 PF01923 Cobalamin adenosyltransferase IC779_16790 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IC779_16800 PF00072 Response regulator receiver domain IC779_16800 PF00486 Transcriptional regulatory protein, C terminal IC779_16805 PF00672 HAMP domain IC779_16805 PF00512 His Kinase A (phospho-acceptor) domain IC779_16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_16815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_16815 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_16815 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC779_16815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_16820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_16820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_16820 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_16820 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC779_16825 PF06146 Phosphate-starvation-inducible E IC779_16845 PF00593 TonB dependent receptor IC779_16845 PF07715 TonB-dependent Receptor Plug Domain IC779_16855 PF02938 GAD domain IC779_16855 PF00152 tRNA synthetases class II (D, K and N) IC779_16855 PF01336 OB-fold nucleic acid binding domain IC779_16860 PF17101 Stealth protein CR1, conserved region 1 IC779_16860 PF11380 Stealth protein CR2, conserved region 2 IC779_16860 PF17103 Stealth protein CR4, conserved region 4 IC779_16895 PF00534 Glycosyl transferases group 1 IC779_16895 PF13439 Glycosyltransferase Family 4 IC779_16900 PF00535 Glycosyl transferase family 2 IC779_16905 PF01522 Polysaccharide deacetylase IC779_16915 PF00884 Sulfatase IC779_16925 PF01063 Amino-transferase class IV IC779_16930 PF08335 GlnD PII-uridylyltransferase IC779_16930 PF03710 Glutamate-ammonia ligase adenylyltransferase IC779_16935 PF09308 LuxQ, periplasmic IC779_16935 PF00072 Response regulator receiver domain IC779_16935 PF00512 His Kinase A (phospho-acceptor) domain IC779_16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_16940 PF02463 RecF/RecN/SMC N terminal domain IC779_16955 PF02547 Queuosine biosynthesis protein IC779_16970 PF01702 Queuine tRNA-ribosyltransferase IC779_16975 PF02699 Preprotein translocase subunit IC779_16980 PF02355 Protein export membrane protein IC779_16980 PF13721 SecD export protein N-terminal TM region IC779_16980 PF07549 SecD/SecF GG Motif IC779_16985 PF02355 Protein export membrane protein IC779_16985 PF07549 SecD/SecF GG Motif IC779_16990 PF04127 DNA / pantothenate metabolism flavoprotein IC779_16990 PF02441 Flavoprotein IC779_16995 PF04002 RadC-like JAB domain IC779_17000 PF01062 Bestrophin, RFP-TM, chloride channel IC779_17005 PF02811 PHP domain IC779_17010 PF04279 Intracellular septation protein A IC779_17015 PF03795 YCII-related domain IC779_17025 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IC779_17025 PF01266 FAD dependent oxidoreductase IC779_17035 PF04461 Protein of unknown function (DUF520) IC779_17050 PF03061 Thioesterase superfamily IC779_17055 PF00085 Thioredoxin IC779_17060 PF00561 alpha/beta hydrolase fold IC779_17065 PF04273 Putative phosphatase (DUF442) IC779_17065 PF00753 Metallo-beta-lactamase superfamily IC779_17075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC779_17075 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_17075 PF00403 Heavy-metal-associated domain IC779_17110 PF17152 Periplasmic sensor domain IC779_17110 PF00990 Diguanylate cyclase, GGDEF domain IC779_17115 PF01389 OmpA-like transmembrane domain IC779_17115 PF00691 OmpA family IC779_17120 PF10518 TAT (twin-arginine translocation) pathway signal sequence IC779_17120 PF00149 Calcineurin-like phosphoesterase IC779_17125 PF13091 PLD-like domain IC779_17135 PF16360 GTP-binding GTPase Middle Region IC779_17135 PF13167 GTP-binding GTPase N-terminal IC779_17135 PF01926 50S ribosome-binding GTPase IC779_17155 PF00149 Calcineurin-like phosphoesterase IC779_17160 PF00398 Ribosomal RNA adenine dimethylase IC779_17165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IC779_17170 PF00572 Ribosomal protein L13 IC779_17175 PF00380 Ribosomal protein S9/S16 IC779_17180 PF13417 Glutathione S-transferase, N-terminal domain IC779_17180 PF00043 Glutathione S-transferase, C-terminal domain IC779_17185 PF04386 Stringent starvation protein B IC779_17215 PF00289 Biotin carboxylase, N-terminal domain IC779_17215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC779_17215 PF02785 Biotin carboxylase C-terminal domain IC779_17215 PF00364 Biotin-requiring enzyme IC779_17220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC779_17220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC779_17220 PF00378 Enoyl-CoA hydratase/isomerase IC779_17225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_17225 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_17225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_17230 PF01039 Carboxyl transferase domain IC779_17245 PF17932 Tetracyclin repressor-like, C-terminal domain IC779_17245 PF00440 Bacterial regulatory proteins, tetR family IC779_17250 PF13302 Acetyltransferase (GNAT) domain IC779_17315 PF01066 CDP-alcohol phosphatidyltransferase IC779_17320 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IC779_17340 PF00056 lactate/malate dehydrogenase, NAD binding domain IC779_17340 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IC779_17350 PF01464 Transglycosylase SLT domain IC779_17350 PF10145 Phage-related minor tail protein IC779_17350 PF01551 Peptidase family M23 IC779_17355 PF00919 Uncharacterized protein family UPF0004 IC779_17355 PF01938 TRAM domain IC779_17355 PF04055 Radical SAM superfamily IC779_17360 PF02562 PhoH-like protein IC779_17365 PF02130 Uncharacterized protein family UPF0054 IC779_17390 PF03358 NADPH-dependent FMN reductase IC779_17395 PF03631 Virulence factor BrkB IC779_17405 PF12833 Helix-turn-helix domain IC779_17410 PF01557 Fumarylacetoacetate (FAA) hydrolase family IC779_17455 PF17876 Cold shock domain IC779_17455 PF08206 Ribonuclease B OB domain IC779_17455 PF08461 Ribonuclease R winged-helix domain IC779_17455 PF00575 S1 RNA binding domain IC779_17455 PF00773 RNB domain IC779_17460 PF01432 Peptidase family M3 IC779_17465 PF09526 Probable metal-binding protein (DUF2387) IC779_17495 PF03937 Flavinator of succinate dehydrogenase IC779_17500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_17500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_17500 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_17510 PF01196 Ribosomal protein L17 IC779_17515 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IC779_17515 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IC779_17515 PF01000 RNA polymerase Rpb3/RpoA insert domain IC779_17520 PF00163 Ribosomal protein S4/S9 N-terminal domain IC779_17520 PF01479 S4 domain IC779_17525 PF00411 Ribosomal protein S11 IC779_17530 PF00416 Ribosomal protein S13/S18 IC779_17535 PF00444 Ribosomal protein L36 IC779_17540 PF00344 SecY translocase IC779_17545 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IC779_17550 PF00327 Ribosomal protein L30p/L7e IC779_17555 PF00333 Ribosomal protein S5, N-terminal domain IC779_17555 PF03719 Ribosomal protein S5, C-terminal domain IC779_17560 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IC779_17565 PF00347 Ribosomal protein L6 IC779_17570 PF00410 Ribosomal protein S8 IC779_17575 PF00253 Ribosomal protein S14p/S29e IC779_17580 PF00673 ribosomal L5P family C-terminus IC779_17580 PF00281 Ribosomal protein L5 IC779_17585 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IC779_17585 PF00467 KOW motif IC779_17590 PF00238 Ribosomal protein L14p/L23e IC779_17595 PF00366 Ribosomal protein S17 IC779_17600 PF00831 Ribosomal L29 protein IC779_17605 PF00252 Ribosomal protein L16p/L10e IC779_17610 PF07650 KH domain IC779_17610 PF00189 Ribosomal protein S3, C-terminal domain IC779_17615 PF00237 Ribosomal protein L22p/L17e IC779_17620 PF00203 Ribosomal protein S19 IC779_17625 PF00181 Ribosomal Proteins L2, RNA binding domain IC779_17625 PF03947 Ribosomal Proteins L2, C-terminal domain IC779_17630 PF00276 Ribosomal protein L23 IC779_17635 PF00573 Ribosomal protein L4/L1 family IC779_17640 PF00297 Ribosomal protein L3 IC779_17645 PF00338 Ribosomal protein S10p/S20e IC779_17650 PF00117 Glutamine amidotransferase class-I IC779_17655 PF01053 Cys/Met metabolism PLP-dependent enzyme IC779_17660 PF05872 Bacterial protein of unknown function (DUF853) IC779_17665 PF00970 Oxidoreductase FAD-binding domain IC779_17665 PF00042 Globin IC779_17665 PF00175 Oxidoreductase NAD-binding domain IC779_17670 PF02082 Transcriptional regulator IC779_17675 PF01926 50S ribosome-binding GTPase IC779_17685 PF00375 Sodium:dicarboxylate symporter family IC779_17695 PF01553 Acyltransferase IC779_17710 PF17191 RecG wedge domain IC779_17710 PF00271 Helicase conserved C-terminal domain IC779_17710 PF00270 DEAD/DEAH box helicase IC779_17715 PF00156 Phosphoribosyl transferase domain IC779_17720 PF00293 NUDIX domain IC779_17725 PF03641 Possible lysine decarboxylase IC779_17730 PF01544 CorA-like Mg2+ transporter protein IC779_17740 PF05494 MlaC protein IC779_17750 PF02405 Permease MlaE IC779_17755 PF00005 ABC transporter IC779_17760 PF00271 Helicase conserved C-terminal domain IC779_17760 PF00270 DEAD/DEAH box helicase IC779_17765 PF00459 Inositol monophosphatase family IC779_17770 PF02779 Transketolase, pyrimidine binding domain IC779_17770 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IC779_17770 PF02780 Transketolase, C-terminal domain IC779_17775 PF00925 GTP cyclohydrolase II IC779_17780 PF01218 Coproporphyrinogen III oxidase IC779_17785 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IC779_17785 PF01488 Shikimate / quinate 5-dehydrogenase IC779_17785 PF08501 Shikimate dehydrogenase substrate binding domain IC779_17795 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC779_17795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC779_17795 PF02770 Acyl-CoA dehydrogenase, middle domain IC779_17795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC779_17805 PF04024 PspC domain IC779_17810 PF00571 CBS domain IC779_17835 PF02091 Glycyl-tRNA synthetase alpha subunit IC779_17840 PF02092 Glycyl-tRNA synthetase beta subunit IC779_17840 PF05746 DALR anticodon binding domain IC779_17850 PF00892 EamA-like transporter family IC779_17855 PF03466 LysR substrate binding domain IC779_17855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_17860 PF01177 Asp/Glu/Hydantoin racemase IC779_17865 PF03466 LysR substrate binding domain IC779_17865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_17880 PF05922 Peptidase inhibitor I9 IC779_17880 PF00082 Subtilase family IC779_17895 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IC779_17900 PF04996 Succinylarginine dihydrolase IC779_17905 PF00171 Aldehyde dehydrogenase family IC779_17910 PF04958 Arginine N-succinyltransferase beta subunit IC779_17915 PF00202 Aminotransferase class-III IC779_17920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IC779_17920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IC779_17925 PF00324 Amino acid permease IC779_17930 PF13936 Helix-turn-helix domain IC779_17930 PF00665 Integrase core domain IC779_17940 PF08241 Methyltransferase domain IC779_17960 PF13614 AAA domain IC779_17965 PF01594 AI-2E family transporter IC779_17970 PF00080 Copper/zinc superoxide dismutase (SODC) IC779_17975 PF12805 FUSC-like inner membrane protein yccS IC779_17980 PF07690 Major Facilitator Superfamily IC779_17990 PF02525 Flavodoxin-like fold IC779_17995 PF03992 Antibiotic biosynthesis monooxygenase IC779_18005 PF01565 FAD binding domain IC779_18005 PF02913 FAD linked oxidases, C-terminal domain IC779_18010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IC779_18010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IC779_18015 PF00892 EamA-like transporter family IC779_18020 PF00892 EamA-like transporter family IC779_18030 PF01925 Sulfite exporter TauE/SafE IC779_18035 PF01509 TruB family pseudouridylate synthase (N terminal domain) IC779_18035 PF09157 Pseudouridine synthase II TruB, C-terminal IC779_18035 PF16198 tRNA pseudouridylate synthase B C-terminal domain IC779_18040 PF03280 Proteobacterial lipase chaperone protein IC779_18045 PF00561 alpha/beta hydrolase fold IC779_18050 PF01245 Ribosomal protein L19 IC779_18055 PF01746 tRNA (Guanine-1)-methyltransferase IC779_18060 PF01782 RimM N-terminal domain IC779_18060 PF05239 PRC-barrel domain IC779_18065 PF00886 Ribosomal protein S16 IC779_18070 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor IC779_18070 PF07963 Prokaryotic N-terminal methylation motif IC779_18075 PF07963 Prokaryotic N-terminal methylation motif IC779_18075 PF00114 Pilin (bacterial filament) IC779_18100 PF00114 Pilin (bacterial filament) IC779_18100 PF07963 Prokaryotic N-terminal methylation motif IC779_18110 PF02401 LytB protein IC779_18115 PF00625 Guanylate kinase IC779_18120 PF01192 RNA polymerase Rpb6 IC779_18130 PF13291 ACT domain IC779_18130 PF02824 TGS domain IC779_18130 PF04607 Region found in RelA / SpoT proteins IC779_18135 PF01042 Endoribonuclease L-PSP IC779_18140 PF04324 BFD-like [2Fe-2S] binding domain IC779_18145 PF00210 Ferritin-like domain IC779_18150 PF15864 Protein glycosylation ligase IC779_18150 PF04932 O-Antigen ligase IC779_18150 PF11846 Virulence factor membrane-bound polymerase, C-terminal IC779_18160 PF00114 Pilin (bacterial filament) IC779_18160 PF07963 Prokaryotic N-terminal methylation motif IC779_18170 PF04536 TPM domain IC779_18175 PF04011 LemA family IC779_18185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IC779_18185 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_18190 PF01645 Conserved region in glutamate synthase IC779_18190 PF00310 Glutamine amidotransferases class-II IC779_18190 PF04898 Glutamate synthase central domain IC779_18190 PF01493 GXGXG motif IC779_18200 PF01761 3-dehydroquinate synthase IC779_18205 PF01202 Shikimate kinase IC779_18210 PF03958 Bacterial type II/III secretion system short domain IC779_18210 PF00263 Bacterial type II and III secretion system protein IC779_18210 PF11741 AMIN domain IC779_18210 PF07660 Secretin and TonB N terminus short domain IC779_18220 PF04350 Pilus assembly protein, PilO IC779_18225 PF05137 Fimbrial assembly protein (PilN) IC779_18230 PF11104 Type IV pilus assembly protein PilM; IC779_18235 PF17092 Penicillin-binding protein OB-like domain IC779_18235 PF00912 Transglycosylase IC779_18235 PF00905 Penicillin binding protein transpeptidase domain IC779_18240 PF13847 Methyltransferase domain IC779_18255 PF08245 Mur ligase middle domain IC779_18255 PF01225 Mur ligase family, catalytic domain IC779_18255 PF02875 Mur ligase family, glutamate ligase domain IC779_18260 PF01225 Mur ligase family, catalytic domain IC779_18260 PF08245 Mur ligase middle domain IC779_18260 PF02875 Mur ligase family, glutamate ligase domain IC779_18265 PF00905 Penicillin binding protein transpeptidase domain IC779_18265 PF03717 Penicillin-binding Protein dimerisation domain IC779_18275 PF01795 MraW methylase family IC779_18290 PF00749 tRNA synthetases class I (E and Q), catalytic domain IC779_18305 PF00324 Amino acid permease IC779_18335 PF01545 Cation efflux family IC779_18340 PF00873 AcrB/AcrD/AcrF family IC779_18345 PF00529 HlyD membrane-fusion protein of T1SS IC779_18345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC779_18365 PF04191 Phospholipid methyltransferase IC779_18380 PF00005 ABC transporter IC779_18380 PF12848 ABC transporter IC779_18385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC779_18385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC779_18385 PF00205 Thiamine pyrophosphate enzyme, central domain IC779_18390 PF01053 Cys/Met metabolism PLP-dependent enzyme IC779_18395 PF00106 short chain dehydrogenase IC779_18400 PF01740 STAS domain IC779_18400 PF00916 Sulfate permease family IC779_18410 PF00575 S1 RNA binding domain IC779_18410 PF09371 Tex-like protein N-terminal domain IC779_18410 PF17674 HHH domain IC779_18410 PF16921 Tex protein YqgF-like domain IC779_18415 PF00072 Response regulator receiver domain IC779_18415 PF00486 Transcriptional regulatory protein, C terminal IC779_18420 PF00672 HAMP domain IC779_18420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_18420 PF00512 His Kinase A (phospho-acceptor) domain IC779_18430 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IC779_18430 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IC779_18435 PF00583 Acetyltransferase (GNAT) family IC779_18455 PF00475 Imidazoleglycerol-phosphate dehydratase IC779_18460 PF00117 Glutamine amidotransferase class-I IC779_18475 PF00977 Histidine biosynthesis protein IC779_18505 PF01636 Phosphotransferase enzyme family IC779_18510 PF00977 Histidine biosynthesis protein IC779_18525 PF00230 Major intrinsic protein IC779_18550 PF02705 K+ potassium transporter IC779_18570 PF02525 Flavodoxin-like fold IC779_18575 PF01638 HxlR-like helix-turn-helix IC779_18595 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IC779_18605 PF01638 HxlR-like helix-turn-helix IC779_18620 PF12833 Helix-turn-helix domain IC779_18620 PF02311 AraC-like ligand binding domain IC779_18625 PF00248 Aldo/keto reductase family IC779_18645 PF03466 LysR substrate binding domain IC779_18645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_18650 PF07690 Major Facilitator Superfamily IC779_18675 PF01593 Flavin containing amine oxidoreductase IC779_18680 PF05726 Pirin C-terminal cupin domain IC779_18680 PF02678 Pirin IC779_18685 PF00857 Isochorismatase family IC779_18690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_18695 PF00171 Aldehyde dehydrogenase family IC779_18700 PF00202 Aminotransferase class-III IC779_18705 PF00155 Aminotransferase class I and II IC779_18705 PF00392 Bacterial regulatory proteins, gntR family IC779_18710 PF00324 Amino acid permease IC779_18720 PF03591 AzlC protein IC779_18740 PF00665 Integrase core domain IC779_18740 PF13936 Helix-turn-helix domain IC779_18775 PF00436 Single-strand binding protein family IC779_18780 PF07690 Major Facilitator Superfamily IC779_18790 PF02581 Thiamine monophosphate synthase IC779_18790 PF08543 Phosphomethylpyrimidine kinase IC779_18790 PF03070 TENA/THI-4/PQQC family IC779_18795 PF00376 MerR family regulatory protein IC779_18795 PF09278 MerR, DNA binding IC779_18800 PF00106 short chain dehydrogenase IC779_18805 PF06942 GlpM protein IC779_18815 PF08240 Alcohol dehydrogenase GroES-like domain IC779_18815 PF00107 Zinc-binding dehydrogenase IC779_18820 PF00440 Bacterial regulatory proteins, tetR family IC779_18820 PF16925 Tetracyclin repressor-like, C-terminal domain IC779_18825 PF17755 UvrA DNA-binding domain IC779_18825 PF17760 UvrA interaction domain IC779_18830 PF00990 Diguanylate cyclase, GGDEF domain IC779_18840 PF02028 BCCT, betaine/carnitine/choline family transporter IC779_18850 PF00474 Sodium:solute symporter family IC779_18855 PF04341 Protein of unknown function, DUF485 IC779_18860 PF00672 HAMP domain IC779_18860 PF00072 Response regulator receiver domain IC779_18860 PF01627 Hpt domain IC779_18860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_18860 PF00512 His Kinase A (phospho-acceptor) domain IC779_18870 PF00072 Response regulator receiver domain IC779_18870 PF00196 Bacterial regulatory proteins, luxR family IC779_18875 PF03358 NADPH-dependent FMN reductase IC779_18880 PF00296 Luciferase-like monooxygenase IC779_18885 PF01037 Lrp/AsnC ligand binding domain IC779_18890 PF00857 Isochorismatase family IC779_18895 PF00501 AMP-binding enzyme IC779_18895 PF16177 Acetyl-coenzyme A synthetase N-terminus IC779_18895 PF13193 AMP-binding enzyme C-terminal domain IC779_18905 PF00924 Mechanosensitive ion channel IC779_18905 PF05552 Conserved TM helix IC779_18910 PF04452 RNA methyltransferase IC779_18915 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IC779_18920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC779_18940 PF01368 DHH family IC779_18940 PF02272 DHHA1 domain IC779_18940 PF17768 RecJ OB domain IC779_18945 PF01243 Pyridoxamine 5'-phosphate oxidase IC779_18945 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IC779_18950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC779_18950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC779_18950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC779_18950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC779_18955 PF00571 CBS domain IC779_18955 PF00478 IMP dehydrogenase / GMP reductase domain IC779_18960 PF03692 Putative zinc- or iron-chelating domain IC779_18965 PF00258 Flavodoxin IC779_18965 PF01613 Flavin reductase like domain IC779_18970 PF01169 Uncharacterized protein family UPF0016 IC779_18980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC779_18980 PF00364 Biotin-requiring enzyme IC779_18980 PF02817 e3 binding domain IC779_18985 PF17831 Pyruvate dehydrogenase E1 component middle domain IC779_18985 PF00456 Transketolase, thiamine diphosphate binding domain IC779_18990 PF01551 Peptidase family M23 IC779_19000 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IC779_19005 PF12327 FtsZ family, C-terminal domain IC779_19005 PF00091 Tubulin/FtsZ family, GTPase domain IC779_19010 PF02491 SHS2 domain inserted in FTSA IC779_19015 PF08478 POTRA domain, FtsQ-type IC779_19015 PF03799 Cell division protein FtsQ IC779_19020 PF01820 D-ala D-ala ligase N-terminus IC779_19020 PF07478 D-ala D-ala ligase C-terminus IC779_19025 PF01225 Mur ligase family, catalytic domain IC779_19025 PF02875 Mur ligase family, glutamate ligase domain IC779_19025 PF08245 Mur ligase middle domain IC779_19030 PF04101 Glycosyltransferase family 28 C-terminal domain IC779_19030 PF03033 Glycosyltransferase family 28 N-terminal domain IC779_19035 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IC779_19035 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IC779_19045 PF00593 TonB dependent receptor IC779_19045 PF07715 TonB-dependent Receptor Plug Domain IC779_19055 PF00156 Phosphoribosyl transferase domain IC779_19060 PF03372 Endonuclease/Exonuclease/phosphatase family IC779_19065 PF03960 ArsC family IC779_19075 PF07859 alpha/beta hydrolase fold IC779_19080 PF17151 Periplasmic sensor domain IC779_19080 PF00990 Diguanylate cyclase, GGDEF domain IC779_19085 PF11412 Disulphide bond corrector protein DsbC IC779_19085 PF02683 Cytochrome C biogenesis protein transmembrane region IC779_19095 PF07722 Peptidase C26 IC779_19095 PF12796 Ankyrin repeats (3 copies) IC779_19115 PF00576 HIUase/Transthyretin family IC779_19120 PF00860 Permease family IC779_19130 PF01494 FAD binding domain IC779_19135 PF03561 Allantoicase repeat IC779_19140 PF04115 Ureidoglycolate lyase IC779_19145 PF00986 DNA gyrase B subunit, carboxyl terminus IC779_19145 PF01751 Toprim domain IC779_19145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_19145 PF00204 DNA gyrase B IC779_19150 PF05728 Uncharacterised protein family (UPF0227) IC779_19190 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IC779_19190 PF01476 LysM domain IC779_19195 PF13296 Putative type VI secretion system Rhs element Vgr IC779_19195 PF04717 Type VI secretion system, phage-baseplate injector IC779_19195 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IC779_19200 PF02600 Disulfide bond formation protein DsbB IC779_19205 PF04262 Glutamate-cysteine ligase IC779_19220 PF04286 Protein of unknown function (DUF445) IC779_19225 PF00155 Aminotransferase class I and II IC779_19230 PF01554 MatE IC779_19235 PF00106 short chain dehydrogenase IC779_19245 PF00486 Transcriptional regulatory protein, C terminal IC779_19245 PF00072 Response regulator receiver domain IC779_19250 PF00989 PAS fold IC779_19250 PF00512 His Kinase A (phospho-acceptor) domain IC779_19250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_19250 PF11808 Phosphate regulon sensor protein PhoR IC779_19265 PF03069 Acetamidase/Formamidase family IC779_19270 PF02666 Phosphatidylserine decarboxylase IC779_19275 PF00581 Rhodanese-like domain IC779_19280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IC779_19280 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IC779_19285 PF02580 D-Tyr-tRNA(Tyr) deacylase IC779_19310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IC779_19310 PF00925 GTP cyclohydrolase II IC779_19315 PF00885 6,7-dimethyl-8-ribityllumazine synthase IC779_19320 PF01029 NusB family IC779_19325 PF02769 AIR synthase related protein, C-terminal domain IC779_19325 PF00586 AIR synthase related protein, N-terminal domain IC779_19330 PF04608 Phosphatidylglycerophosphatase A IC779_19335 PF12804 MobA-like NTP transferase domain IC779_19335 PF00132 Bacterial transferase hexapeptide (six repeats) IC779_19335 PF14602 Hexapeptide repeat of succinyl-transferase IC779_19340 PF01380 SIS domain IC779_19370 PF01810 LysE type translocator IC779_19375 PF01177 Asp/Glu/Hydantoin racemase IC779_19380 PF13419 Haloacid dehalogenase-like hydrolase IC779_19390 PF00491 Arginase family IC779_19395 PF01979 Amidohydrolase family IC779_19400 PF00324 Amino acid permease IC779_19405 PF00221 Aromatic amino acid lyase IC779_19410 PF01175 Urocanase Rossmann-like domain IC779_19410 PF17392 Urocanase C-terminal domain IC779_19410 PF17391 Urocanase N-terminal domain IC779_19415 PF05962 HutD IC779_19420 PF07702 UTRA domain IC779_19420 PF00392 Bacterial regulatory proteins, gntR family IC779_19430 PF07683 Cobalamin synthesis protein cobW C-terminal domain IC779_19430 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC779_19440 PF00324 Amino acid permease IC779_19450 PF14497 Glutathione S-transferase, C-terminal domain IC779_19450 PF02798 Glutathione S-transferase, N-terminal domain IC779_19455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC779_19465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC779_19470 PF04463 Protein of unknown function (DUF523) IC779_19475 PF01554 MatE IC779_19480 PF01758 Sodium Bile acid symporter family IC779_19485 PF00857 Isochorismatase family IC779_19490 PF00701 Dihydrodipicolinate synthetase family IC779_19500 PF01259 SAICAR synthetase IC779_19510 PF01226 Formate/nitrite transporter IC779_19515 PF16193 AAA C-terminal domain IC779_19515 PF12002 MgsA AAA+ ATPase C terminal IC779_19515 PF00004 ATPase family associated with various cellular activities (AAA) IC779_19520 PF07995 Glucose / Sorbosone dehydrogenase IC779_19525 PF03692 Putative zinc- or iron-chelating domain IC779_19530 PF07043 Protein of unknown function (DUF1328) IC779_19545 PF00730 HhH-GPD superfamily base excision DNA repair protein IC779_19545 PF00633 Helix-hairpin-helix motif IC779_19545 PF10576 Iron-sulfur binding domain of endonuclease III IC779_19545 PF14815 NUDIX domain IC779_19560 PF03352 Methyladenine glycosylase IC779_19565 PF00107 Zinc-binding dehydrogenase IC779_19565 PF08240 Alcohol dehydrogenase GroES-like domain IC779_19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_19585 PF03466 LysR substrate binding domain IC779_19590 PF00248 Aldo/keto reductase family IC779_19595 PF07690 Major Facilitator Superfamily IC779_19605 PF01113 Dihydrodipicolinate reductase, N-terminus IC779_19605 PF05173 Dihydrodipicolinate reductase, C-terminus IC779_19615 PF00684 DnaJ central domain IC779_19615 PF01556 DnaJ C terminal domain IC779_19615 PF00226 DnaJ domain IC779_19625 PF00873 AcrB/AcrD/AcrF family IC779_19630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC779_19635 PF00440 Bacterial regulatory proteins, tetR family IC779_19635 PF08361 MAATS-type transcriptional repressor, C-terminal region IC779_19640 PF00311 Phosphoenolpyruvate carboxylase IC779_19645 PF00860 Permease family IC779_19650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_19650 PF03466 LysR substrate binding domain IC779_19665 PF00920 Dehydratase family IC779_19670 PF00551 Formyl transferase IC779_19670 PF02911 Formyl transferase, C-terminal domain IC779_19675 PF01029 NusB family IC779_19675 PF01189 16S rRNA methyltransferase RsmB/F IC779_19685 PF00209 Sodium:neurotransmitter symporter family IC779_19695 PF02798 Glutathione S-transferase, N-terminal domain IC779_19725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IC779_19730 PF07859 alpha/beta hydrolase fold IC779_19755 PF01025 GrpE IC779_19760 PF00012 Hsp70 protein IC779_19780 PF13406 Transglycosylase SLT domain IC779_19785 PF02222 ATP-grasp domain IC779_19785 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IC779_19790 PF00731 AIR carboxylase IC779_19800 PF01225 Mur ligase family, catalytic domain IC779_19800 PF02875 Mur ligase family, glutamate ligase domain IC779_19800 PF08245 Mur ligase middle domain IC779_19810 PF01569 PAP2 superfamily IC779_19815 PF03741 Integral membrane protein TerC family IC779_19825 PF03738 Glutathionylspermidine synthase preATP-grasp IC779_19830 PF00355 Rieske [2Fe-2S] domain IC779_19835 PF01979 Amidohydrolase family IC779_19840 PF00156 Phosphoribosyl transferase domain IC779_19850 PF13098 Thioredoxin-like domain IC779_19850 PF10411 Disulfide bond isomerase protein N-terminus IC779_19855 PF02583 Metal-sensitive transcriptional repressor IC779_19860 PF01926 50S ribosome-binding GTPase IC779_19860 PF12631 MnmE helical domain IC779_19860 PF10396 GTP-binding protein TrmE N-terminus IC779_19865 PF14849 YidC periplasmic domain IC779_19865 PF02096 60Kd inner membrane protein IC779_19870 PF01809 Putative membrane protein insertion efficiency factor IC779_19875 PF00825 Ribonuclease P IC779_19880 PF00468 Ribosomal protein L34 IC779_19970 PF01551 Peptidase family M23 IC779_19970 PF04225 Opacity-associated protein A LysM-like domain IC779_19995 PF00717 Peptidase S24-like IC779_20000 PF00817 impB/mucB/samB family IC779_20000 PF11798 IMS family HHH motif IC779_20000 PF13438 Domain of unknown function (DUF4113) IC779_20000 PF11799 impB/mucB/samB family C-terminal domain IC779_20010 PF17762 HTH domain found in ParB protein IC779_20010 PF02195 ParB-like nuclease domain IC779_20015 PF13614 AAA domain IC779_20065 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IC779_20065 PF00437 Type II/IV secretion system protein IC779_20165 PF00665 Integrase core domain IC779_20165 PF13936 Helix-turn-helix domain IC779_20170 PF01636 Phosphotransferase enzyme family IC779_20175 PF13936 Helix-turn-helix domain IC779_20175 PF00665 Integrase core domain IC779_20250 PF01396 Topoisomerase DNA binding C4 zinc finger IC779_20250 PF01751 Toprim domain IC779_20250 PF01131 DNA topoisomerase IC779_20265 PF01636 Phosphotransferase enzyme family IC779_20270 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase IC779_20295 PF02909 Tetracyclin repressor-like, C-terminal domain IC779_20295 PF00440 Bacterial regulatory proteins, tetR family IC779_20300 PF07690 Major Facilitator Superfamily IC779_20315 PF00809 Pterin binding enzyme IC779_20330 PF00665 Integrase core domain IC779_20355 PF02899 Phage integrase, N-terminal SAM-like domain IC779_20355 PF00589 Phage integrase family IC779_20385 PF00916 Sulfate permease family IC779_20385 PF01740 STAS domain IC779_20390 PF00582 Universal stress protein family IC779_20415 PF13005 zinc-finger binding domain of transposase IS66 IC779_20415 PF13817 IS66 C-terminal element IC779_20415 PF13007 Transposase C of IS166 homeodomain IC779_20415 PF03050 Transposase IS66 family IC779_20425 PF00665 Integrase core domain IC779_20455 PF01435 Peptidase family M48 IC779_20520 PF13737 Transposase DDE domain IC779_20570 PF02661 Fic/DOC family IC779_20610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IC779_20625 PF00563 EAL domain IC779_20625 PF11809 Domain of unknown function (DUF3330) IC779_20630 PF05052 MerE protein IC779_20635 PF13411 MerR HTH family regulatory protein IC779_20640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC779_20640 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC779_20640 PF00403 Heavy-metal-associated domain IC779_20645 PF03203 MerC mercury resistance protein IC779_20650 PF00403 Heavy-metal-associated domain IC779_20655 PF02411 MerT mercuric transport protein IC779_20660 PF09278 MerR, DNA binding IC779_20660 PF00376 MerR family regulatory protein IC779_20665 PF13610 DDE domain IC779_20675 PF13411 MerR HTH family regulatory protein IC779_20690 PF07670 Nucleoside recognition IC779_20690 PF02421 Ferrous iron transport protein B IC779_20690 PF07664 Ferrous iron transport protein B C terminus IC779_20700 PF00873 AcrB/AcrD/AcrF family IC779_20705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC779_20725 PF00394 Multicopper oxidase IC779_20725 PF07731 Multicopper oxidase IC779_20725 PF07732 Multicopper oxidase IC779_20735 PF00072 Response regulator receiver domain IC779_20735 PF00486 Transcriptional regulatory protein, C terminal IC779_20740 PF00672 HAMP domain IC779_20740 PF00512 His Kinase A (phospho-acceptor) domain IC779_20740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC779_20745 PF13194 Domain of unknown function (DUF4010) IC779_20795 PF00403 Heavy-metal-associated domain IC779_20805 PF02583 Metal-sensitive transcriptional repressor IC779_20815 PF13610 DDE domain IC779_20840 PF00580 UvrD/REP helicase N-terminal domain IC779_20840 PF13361 UvrD-like helicase C-terminal domain IC779_20860 PF13361 UvrD-like helicase C-terminal domain IC779_20860 PF00580 UvrD/REP helicase N-terminal domain IC779_20860 PF12462 DNA helicase IV / RNA helicase N terminal IC779_20870 PF13737 Transposase DDE domain IC779_20905 PF00589 Phage integrase family IC779_20905 PF13356 Arm DNA-binding domain IC779_20910 PF04151 Bacterial pre-peptidase C-terminal domain IC779_20920 PF16884 N-terminal domain of oxidoreductase IC779_20920 PF00107 Zinc-binding dehydrogenase IC779_20925 PF16925 Tetracyclin repressor-like, C-terminal domain IC779_20925 PF00440 Bacterial regulatory proteins, tetR family IC779_20935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC779_20945 PF00465 Iron-containing alcohol dehydrogenase IC779_20960 PF00756 Putative esterase IC779_20965 PF08240 Alcohol dehydrogenase GroES-like domain IC779_20965 PF00107 Zinc-binding dehydrogenase IC779_20970 PF02583 Metal-sensitive transcriptional repressor IC779_20980 PF01965 DJ-1/PfpI family IC779_20980 PF12833 Helix-turn-helix domain IC779_20985 PF01321 Creatinase/Prolidase N-terminal domain IC779_20985 PF00557 Metallopeptidase family M24 IC779_20990 PF00083 Sugar (and other) transporter IC779_20990 PF08946 Osmosensory transporter coiled coil IC779_20995 PF00892 EamA-like transporter family IC779_21005 PF08659 KR domain IC779_21005 PF02801 Beta-ketoacyl synthase, C-terminal domain IC779_21005 PF14765 Polyketide synthase dehydratase IC779_21005 PF00109 Beta-ketoacyl synthase, N-terminal domain IC779_21005 PF16197 Ketoacyl-synthetase C-terminal extension IC779_21005 PF08240 Alcohol dehydrogenase GroES-like domain IC779_21005 PF00698 Acyl transferase domain IC779_21005 PF00550 Phosphopantetheine attachment site IC779_21010 PF08240 Alcohol dehydrogenase GroES-like domain IC779_21010 PF00107 Zinc-binding dehydrogenase IC779_21015 PF03466 LysR substrate binding domain IC779_21015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC779_21020 PF00872 Transposase, Mutator family IC779_21035 PF00916 Sulfate permease family IC779_21035 PF01740 STAS domain IC779_21040 PF05973 Phage derived protein Gp49-like (DUF891) IC779_21075 PF05973 Phage derived protein Gp49-like (DUF891) IC779_21125 PF03432 Relaxase/Mobilisation nuclease domain