locus-tag class description IC784_00005 PF11638 DnaA N-terminal domain IC784_00005 PF08299 Bacterial dnaA protein helix-turn-helix IC784_00005 PF00308 Bacterial dnaA protein IC784_00010 PF02767 DNA polymerase III beta subunit, central domain IC784_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain IC784_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain IC784_00015 PF02463 RecF/RecN/SMC N terminal domain IC784_00030 PF09335 SNARE associated Golgi protein IC784_00055 PF01521 Iron-sulphur cluster biosynthesis IC784_00060 PF00561 alpha/beta hydrolase fold IC784_00065 PF03702 Anhydro-N-acetylmuramic acid kinase IC784_00070 PF00579 tRNA synthetases class I (W and Y) IC784_00100 PF02798 Glutathione S-transferase, N-terminal domain IC784_00110 PF00209 Sodium:neurotransmitter symporter family IC784_00120 PF01029 NusB family IC784_00120 PF01189 16S rRNA methyltransferase RsmB/F IC784_00125 PF02911 Formyl transferase, C-terminal domain IC784_00125 PF00551 Formyl transferase IC784_00130 PF00920 Dehydratase family IC784_00145 PF03466 LysR substrate binding domain IC784_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_00150 PF00860 Permease family IC784_00155 PF00311 Phosphoenolpyruvate carboxylase IC784_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region IC784_00160 PF00440 Bacterial regulatory proteins, tetR family IC784_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC784_00170 PF00873 AcrB/AcrD/AcrF family IC784_00180 PF00684 DnaJ central domain IC784_00180 PF01556 DnaJ C terminal domain IC784_00180 PF00226 DnaJ domain IC784_00190 PF01113 Dihydrodipicolinate reductase, N-terminus IC784_00190 PF05173 Dihydrodipicolinate reductase, C-terminus IC784_00200 PF07690 Major Facilitator Superfamily IC784_00205 PF00248 Aldo/keto reductase family IC784_00210 PF03466 LysR substrate binding domain IC784_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_00225 PF00392 Bacterial regulatory proteins, gntR family IC784_00225 PF00155 Aminotransferase class I and II IC784_00230 PF08240 Alcohol dehydrogenase GroES-like domain IC784_00230 PF00107 Zinc-binding dehydrogenase IC784_00235 PF03352 Methyladenine glycosylase IC784_00265 PF07043 Protein of unknown function (DUF1328) IC784_00270 PF03692 Putative zinc- or iron-chelating domain IC784_00275 PF07995 Glucose / Sorbosone dehydrogenase IC784_00285 PF01226 Formate/nitrite transporter IC784_00295 PF01259 SAICAR synthetase IC784_00305 PF00701 Dihydrodipicolinate synthetase family IC784_00310 PF00857 Isochorismatase family IC784_00315 PF01758 Sodium Bile acid symporter family IC784_00320 PF01554 MatE IC784_00325 PF04463 Protein of unknown function (DUF523) IC784_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC784_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC784_00345 PF02798 Glutathione S-transferase, N-terminal domain IC784_00345 PF14497 Glutathione S-transferase, C-terminal domain IC784_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC784_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain IC784_00380 PF05962 HutD IC784_00390 PF00221 Aromatic amino acid lyase IC784_00400 PF01979 Amidohydrolase family IC784_00405 PF00491 Arginase family IC784_00415 PF13419 Haloacid dehalogenase-like hydrolase IC784_00420 PF01177 Asp/Glu/Hydantoin racemase IC784_00460 PF13737 Transposase DDE domain IC784_00465 PF01380 SIS domain IC784_00475 PF04608 Phosphatidylglycerophosphatase A IC784_00480 PF00586 AIR synthase related protein, N-terminal domain IC784_00480 PF02769 AIR synthase related protein, C-terminal domain IC784_00485 PF01029 NusB family IC784_00490 PF00885 6,7-dimethyl-8-ribityllumazine synthase IC784_00495 PF00925 GTP cyclohydrolase II IC784_00495 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IC784_00520 PF02580 D-Tyr-tRNA(Tyr) deacylase IC784_00525 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IC784_00525 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IC784_00535 PF02666 Phosphatidylserine decarboxylase IC784_00540 PF13737 Transposase DDE domain IC784_00545 PF03069 Acetamidase/Formamidase family IC784_00560 PF11808 Phosphate regulon sensor protein PhoR IC784_00560 PF00989 PAS fold IC784_00560 PF00512 His Kinase A (phospho-acceptor) domain IC784_00560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_00565 PF00072 Response regulator receiver domain IC784_00565 PF00486 Transcriptional regulatory protein, C terminal IC784_00575 PF00106 short chain dehydrogenase IC784_00580 PF01554 MatE IC784_00590 PF04286 Protein of unknown function (DUF445) IC784_00615 PF04717 Type VI secretion system, phage-baseplate injector IC784_00615 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IC784_00615 PF13296 Putative type VI secretion system Rhs element Vgr IC784_00620 PF01476 LysM domain IC784_00620 PF01510 N-acetylmuramoyl-L-alanine amidase IC784_00620 PF01471 Putative peptidoglycan binding domain IC784_00645 PF13737 Transposase DDE domain IC784_00660 PF05728 Uncharacterised protein family (UPF0227) IC784_00665 PF00986 DNA gyrase B subunit, carboxyl terminus IC784_00665 PF00204 DNA gyrase B IC784_00665 PF01751 Toprim domain IC784_00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_00675 PF03561 Allantoicase repeat IC784_00695 PF00576 HIUase/Transthyretin family IC784_00725 PF02683 Cytochrome C biogenesis protein transmembrane region IC784_00725 PF11412 Disulphide bond corrector protein DsbC IC784_00735 PF07859 alpha/beta hydrolase fold IC784_00745 PF03960 ArsC family IC784_00750 PF03372 Endonuclease/Exonuclease/phosphatase family IC784_00755 PF00156 Phosphoribosyl transferase domain IC784_00765 PF00145 C-5 cytosine-specific DNA methylase IC784_00770 PF00145 C-5 cytosine-specific DNA methylase IC784_00780 PF13737 Transposase DDE domain IC784_00790 PF00593 TonB dependent receptor IC784_00790 PF07715 TonB-dependent Receptor Plug Domain IC784_00800 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IC784_00800 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IC784_00805 PF03033 Glycosyltransferase family 28 N-terminal domain IC784_00805 PF04101 Glycosyltransferase family 28 C-terminal domain IC784_00810 PF01225 Mur ligase family, catalytic domain IC784_00810 PF02875 Mur ligase family, glutamate ligase domain IC784_00810 PF08245 Mur ligase middle domain IC784_00815 PF07478 D-ala D-ala ligase C-terminus IC784_00815 PF01820 D-ala D-ala ligase N-terminus IC784_00820 PF08478 POTRA domain, FtsQ-type IC784_00820 PF03799 Cell division protein FtsQ IC784_00825 PF02491 SHS2 domain inserted in FTSA IC784_00830 PF00091 Tubulin/FtsZ family, GTPase domain IC784_00830 PF12327 FtsZ family, C-terminal domain IC784_00835 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IC784_00845 PF01551 Peptidase family M23 IC784_00850 PF00456 Transketolase, thiamine diphosphate binding domain IC784_00850 PF17831 Pyruvate dehydrogenase E1 component middle domain IC784_00865 PF01169 Uncharacterized protein family UPF0016 IC784_00870 PF00593 TonB dependent receptor IC784_00870 PF07715 TonB-dependent Receptor Plug Domain IC784_00875 PF01613 Flavin reductase like domain IC784_00875 PF00258 Flavodoxin IC784_00880 PF03692 Putative zinc- or iron-chelating domain IC784_00885 PF00478 IMP dehydrogenase / GMP reductase domain IC784_00885 PF00571 CBS domain IC784_00890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC784_00890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC784_00890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC784_00890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC784_00895 PF01243 Pyridoxamine 5'-phosphate oxidase IC784_00895 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IC784_00920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC784_00925 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IC784_00930 PF04452 RNA methyltransferase IC784_00935 PF00924 Mechanosensitive ion channel IC784_00945 PF13193 AMP-binding enzyme C-terminal domain IC784_00945 PF16177 Acetyl-coenzyme A synthetase N-terminus IC784_00945 PF00501 AMP-binding enzyme IC784_00950 PF00857 Isochorismatase family IC784_00960 PF00296 Luciferase-like monooxygenase IC784_00965 PF03358 NADPH-dependent FMN reductase IC784_00985 PF04341 Protein of unknown function, DUF485 IC784_01000 PF02028 BCCT, betaine/carnitine/choline family transporter IC784_01010 PF00990 Diguanylate cyclase, GGDEF domain IC784_01020 PF16925 Tetracyclin repressor-like, C-terminal domain IC784_01020 PF00440 Bacterial regulatory proteins, tetR family IC784_01035 PF06942 GlpM protein IC784_01040 PF00106 short chain dehydrogenase IC784_01045 PF09278 MerR, DNA binding IC784_01045 PF00376 MerR family regulatory protein IC784_01060 PF07690 Major Facilitator Superfamily IC784_01065 PF00436 Single-strand binding protein family IC784_01075 PF03591 AzlC protein IC784_01085 PF00324 Amino acid permease IC784_01090 PF00392 Bacterial regulatory proteins, gntR family IC784_01090 PF00155 Aminotransferase class I and II IC784_01095 PF00202 Aminotransferase class-III IC784_01100 PF00171 Aldehyde dehydrogenase family IC784_01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_01110 PF00857 Isochorismatase family IC784_01115 PF05726 Pirin C-terminal cupin domain IC784_01115 PF02678 Pirin IC784_01140 PF13737 Transposase DDE domain IC784_01155 PF00005 ABC transporter IC784_01155 PF00664 ABC transporter transmembrane region IC784_01160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC784_01170 PF02687 FtsX-like permease family IC784_01170 PF12704 MacB-like periplasmic core domain IC784_01170 PF00005 ABC transporter IC784_01185 PF07690 Major Facilitator Superfamily IC784_01190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_01190 PF03466 LysR substrate binding domain IC784_01210 PF00248 Aldo/keto reductase family IC784_01240 PF13737 Transposase DDE domain IC784_01255 PF01638 HxlR-like helix-turn-helix IC784_01260 PF02525 Flavodoxin-like fold IC784_01295 PF05656 Protein of unknown function (DUF805) IC784_01315 PF02384 N-6 DNA Methylase IC784_01315 PF12161 HsdM N-terminal domain IC784_01320 PF01420 Type I restriction modification DNA specificity domain IC784_01360 PF13737 Transposase DDE domain IC784_01365 PF00589 Phage integrase family IC784_01365 PF13356 Arm DNA-binding domain IC784_01375 PF02705 K+ potassium transporter IC784_01415 PF00977 Histidine biosynthesis protein IC784_01420 PF01636 Phosphotransferase enzyme family IC784_01450 PF00977 Histidine biosynthesis protein IC784_01465 PF00117 Glutamine amidotransferase class-I IC784_01470 PF00475 Imidazoleglycerol-phosphate dehydratase IC784_01490 PF00583 Acetyltransferase (GNAT) family IC784_01495 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IC784_01495 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IC784_01500 PF00672 HAMP domain IC784_01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_01500 PF00512 His Kinase A (phospho-acceptor) domain IC784_01505 PF00072 Response regulator receiver domain IC784_01505 PF00486 Transcriptional regulatory protein, C terminal IC784_01520 PF01740 STAS domain IC784_01520 PF00916 Sulfate permease family IC784_01525 PF00106 short chain dehydrogenase IC784_01530 PF01053 Cys/Met metabolism PLP-dependent enzyme IC784_01540 PF12848 ABC transporter IC784_01540 PF00005 ABC transporter IC784_01555 PF04191 Phospholipid methyltransferase IC784_01580 PF01545 Cation efflux family IC784_01610 PF00324 Amino acid permease IC784_01625 PF00749 tRNA synthetases class I (E and Q), catalytic domain IC784_01640 PF01795 MraW methylase family IC784_01655 PF08245 Mur ligase middle domain IC784_01655 PF02875 Mur ligase family, glutamate ligase domain IC784_01655 PF01225 Mur ligase family, catalytic domain IC784_01675 PF13847 Methyltransferase domain IC784_01680 PF00912 Transglycosylase IC784_01680 PF17092 Penicillin-binding protein OB-like domain IC784_01680 PF00905 Penicillin binding protein transpeptidase domain IC784_01685 PF11104 Type IV pilus assembly protein PilM; IC784_01690 PF05137 Fimbrial assembly protein (PilN) IC784_01695 PF04350 Pilus assembly protein, PilO IC784_01705 PF00263 Bacterial type II and III secretion system protein IC784_01705 PF03958 Bacterial type II/III secretion system short domain IC784_01705 PF07660 Secretin and TonB N terminus short domain IC784_01705 PF11741 AMIN domain IC784_01710 PF01202 Shikimate kinase IC784_01715 PF01761 3-dehydroquinate synthase IC784_01730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IC784_01730 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_01740 PF04011 LemA family IC784_01745 PF04536 TPM domain IC784_01755 PF07963 Prokaryotic N-terminal methylation motif IC784_01755 PF00114 Pilin (bacterial filament) IC784_01765 PF00210 Ferritin-like domain IC784_01770 PF04324 BFD-like [2Fe-2S] binding domain IC784_01775 PF01042 Endoribonuclease L-PSP IC784_01780 PF13291 ACT domain IC784_01780 PF04607 Region found in RelA / SpoT proteins IC784_01780 PF02824 TGS domain IC784_01790 PF01192 RNA polymerase Rpb6 IC784_01795 PF00625 Guanylate kinase IC784_01800 PF02401 LytB protein IC784_01830 PF07963 Prokaryotic N-terminal methylation motif IC784_01830 PF00114 Pilin (bacterial filament) IC784_01835 PF07963 Prokaryotic N-terminal methylation motif IC784_01835 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor IC784_01840 PF00886 Ribosomal protein S16 IC784_01845 PF05239 PRC-barrel domain IC784_01845 PF01782 RimM N-terminal domain IC784_01850 PF01746 tRNA (Guanine-1)-methyltransferase IC784_01855 PF01245 Ribosomal protein L19 IC784_01860 PF00561 alpha/beta hydrolase fold IC784_01865 PF03280 Proteobacterial lipase chaperone protein IC784_01870 PF01509 TruB family pseudouridylate synthase (N terminal domain) IC784_01870 PF16198 tRNA pseudouridylate synthase B C-terminal domain IC784_01870 PF09157 Pseudouridine synthase II TruB, C-terminal IC784_01875 PF01925 Sulfite exporter TauE/SafE IC784_01885 PF00892 EamA-like transporter family IC784_01890 PF00892 EamA-like transporter family IC784_01895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IC784_01895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IC784_01900 PF02913 FAD linked oxidases, C-terminal domain IC784_01900 PF01565 FAD binding domain IC784_01910 PF03992 Antibiotic biosynthesis monooxygenase IC784_01915 PF02525 Flavodoxin-like fold IC784_01925 PF07690 Major Facilitator Superfamily IC784_01935 PF12805 FUSC-like inner membrane protein yccS IC784_01940 PF00080 Copper/zinc superoxide dismutase (SODC) IC784_01945 PF01594 AI-2E family transporter IC784_01950 PF13614 AAA domain IC784_01970 PF08241 Methyltransferase domain IC784_01985 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IC784_01985 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IC784_01990 PF00202 Aminotransferase class-III IC784_02000 PF00171 Aldehyde dehydrogenase family IC784_02005 PF04996 Succinylarginine dihydrolase IC784_02025 PF00082 Subtilase family IC784_02025 PF05922 Peptidase inhibitor I9 IC784_02040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_02040 PF03466 LysR substrate binding domain IC784_02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_02050 PF03466 LysR substrate binding domain IC784_02055 PF00892 EamA-like transporter family IC784_02065 PF02092 Glycyl-tRNA synthetase beta subunit IC784_02065 PF05746 DALR anticodon binding domain IC784_02070 PF02091 Glycyl-tRNA synthetase alpha subunit IC784_02095 PF00571 CBS domain IC784_02100 PF04024 PspC domain IC784_02110 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC784_02110 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_02110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_02110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_02120 PF01488 Shikimate / quinate 5-dehydrogenase IC784_02120 PF08501 Shikimate dehydrogenase substrate binding domain IC784_02120 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IC784_02125 PF01218 Coproporphyrinogen III oxidase IC784_02130 PF00925 GTP cyclohydrolase II IC784_02140 PF00459 Inositol monophosphatase family IC784_02145 PF00270 DEAD/DEAH box helicase IC784_02145 PF00271 Helicase conserved C-terminal domain IC784_02150 PF00005 ABC transporter IC784_02155 PF02405 Permease MlaE IC784_02165 PF05494 MlaC protein IC784_02175 PF01544 CorA-like Mg2+ transporter protein IC784_02180 PF03641 Possible lysine decarboxylase IC784_02185 PF00293 NUDIX domain IC784_02195 PF17191 RecG wedge domain IC784_02195 PF00270 DEAD/DEAH box helicase IC784_02195 PF00271 Helicase conserved C-terminal domain IC784_02210 PF01553 Acyltransferase IC784_02220 PF00375 Sodium:dicarboxylate symporter family IC784_02230 PF01926 50S ribosome-binding GTPase IC784_02235 PF02082 Transcriptional regulator IC784_02240 PF00042 Globin IC784_02240 PF00970 Oxidoreductase FAD-binding domain IC784_02240 PF00175 Oxidoreductase NAD-binding domain IC784_02245 PF05872 Bacterial protein of unknown function (DUF853) IC784_02250 PF01053 Cys/Met metabolism PLP-dependent enzyme IC784_02255 PF00117 Glutamine amidotransferase class-I IC784_02260 PF00338 Ribosomal protein S10p/S20e IC784_02265 PF00297 Ribosomal protein L3 IC784_02270 PF00573 Ribosomal protein L4/L1 family IC784_02275 PF00276 Ribosomal protein L23 IC784_02280 PF00181 Ribosomal Proteins L2, RNA binding domain IC784_02280 PF03947 Ribosomal Proteins L2, C-terminal domain IC784_02285 PF00203 Ribosomal protein S19 IC784_02290 PF00237 Ribosomal protein L22p/L17e IC784_02295 PF07650 KH domain IC784_02295 PF00189 Ribosomal protein S3, C-terminal domain IC784_02300 PF00252 Ribosomal protein L16p/L10e IC784_02305 PF00831 Ribosomal L29 protein IC784_02310 PF00366 Ribosomal protein S17 IC784_02315 PF00238 Ribosomal protein L14p/L23e IC784_02320 PF00467 KOW motif IC784_02320 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IC784_02325 PF00281 Ribosomal protein L5 IC784_02325 PF00673 ribosomal L5P family C-terminus IC784_02330 PF00253 Ribosomal protein S14p/S29e IC784_02335 PF00410 Ribosomal protein S8 IC784_02340 PF00347 Ribosomal protein L6 IC784_02345 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IC784_02350 PF00333 Ribosomal protein S5, N-terminal domain IC784_02350 PF03719 Ribosomal protein S5, C-terminal domain IC784_02355 PF00327 Ribosomal protein L30p/L7e IC784_02360 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IC784_02365 PF00344 SecY translocase IC784_02370 PF00444 Ribosomal protein L36 IC784_02375 PF00416 Ribosomal protein S13/S18 IC784_02380 PF00411 Ribosomal protein S11 IC784_02385 PF00163 Ribosomal protein S4/S9 N-terminal domain IC784_02385 PF01479 S4 domain IC784_02390 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IC784_02390 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IC784_02390 PF01000 RNA polymerase Rpb3/RpoA insert domain IC784_02395 PF01196 Ribosomal protein L17 IC784_02400 PF00743 Flavin-binding monooxygenase-like IC784_02405 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_02405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_02405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_02410 PF03937 Flavinator of succinate dehydrogenase IC784_02440 PF09526 Probable metal-binding protein (DUF2387) IC784_02445 PF01432 Peptidase family M3 IC784_02450 PF00773 RNB domain IC784_02450 PF08461 Ribonuclease R winged-helix domain IC784_02450 PF17876 Cold shock domain IC784_02450 PF00575 S1 RNA binding domain IC784_02450 PF08206 Ribonuclease B OB domain IC784_02475 PF13737 Transposase DDE domain IC784_02505 PF01557 Fumarylacetoacetate (FAA) hydrolase family IC784_02510 PF12833 Helix-turn-helix domain IC784_02520 PF03631 Virulence factor BrkB IC784_02525 PF03358 NADPH-dependent FMN reductase IC784_02550 PF02130 Uncharacterized protein family UPF0054 IC784_02555 PF02562 PhoH-like protein IC784_02560 PF01938 TRAM domain IC784_02560 PF04055 Radical SAM superfamily IC784_02560 PF00919 Uncharacterized protein family UPF0004 IC784_02565 PF01464 Transglycosylase SLT domain IC784_02565 PF10145 Phage-related minor tail protein IC784_02565 PF01551 Peptidase family M23 IC784_02575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IC784_02575 PF00056 lactate/malate dehydrogenase, NAD binding domain IC784_02595 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IC784_02600 PF01066 CDP-alcohol phosphatidyltransferase IC784_02650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_02650 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_02650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_02655 PF13302 Acetyltransferase (GNAT) domain IC784_02660 PF00440 Bacterial regulatory proteins, tetR family IC784_02660 PF17932 Tetracyclin repressor-like, C-terminal domain IC784_02675 PF01039 Carboxyl transferase domain IC784_02680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_02680 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_02680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_02720 PF04386 Stringent starvation protein B IC784_02725 PF13417 Glutathione S-transferase, N-terminal domain IC784_02725 PF00043 Glutathione S-transferase, C-terminal domain IC784_02730 PF00380 Ribosomal protein S9/S16 IC784_02735 PF00572 Ribosomal protein L13 IC784_02740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IC784_02750 PF00149 Calcineurin-like phosphoesterase IC784_02770 PF01926 50S ribosome-binding GTPase IC784_02770 PF16360 GTP-binding GTPase Middle Region IC784_02770 PF13167 GTP-binding GTPase N-terminal IC784_02785 PF10518 TAT (twin-arginine translocation) pathway signal sequence IC784_02785 PF00149 Calcineurin-like phosphoesterase IC784_02790 PF00691 OmpA family IC784_02790 PF01389 OmpA-like transmembrane domain IC784_02830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC784_02830 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_02830 PF00403 Heavy-metal-associated domain IC784_02840 PF00753 Metallo-beta-lactamase superfamily IC784_02840 PF04273 Putative phosphatase (DUF442) IC784_02850 PF00085 Thioredoxin IC784_02855 PF03061 Thioesterase superfamily IC784_02880 PF01266 FAD dependent oxidoreductase IC784_02880 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IC784_02890 PF03795 YCII-related domain IC784_02895 PF04279 Intracellular septation protein A IC784_02900 PF02811 PHP domain IC784_02905 PF01062 Bestrophin, RFP-TM, chloride channel IC784_02910 PF04002 RadC-like JAB domain IC784_02915 PF02441 Flavoprotein IC784_02915 PF04127 DNA / pantothenate metabolism flavoprotein IC784_02920 PF02355 Protein export membrane protein IC784_02920 PF07549 SecD/SecF GG Motif IC784_02925 PF07549 SecD/SecF GG Motif IC784_02925 PF02355 Protein export membrane protein IC784_02925 PF13721 SecD export protein N-terminal TM region IC784_02930 PF02699 Preprotein translocase subunit IC784_02935 PF01702 Queuine tRNA-ribosyltransferase IC784_02975 PF00072 Response regulator receiver domain IC784_02975 PF09308 LuxQ, periplasmic IC784_02975 PF00512 His Kinase A (phospho-acceptor) domain IC784_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_02980 PF03710 Glutamate-ammonia ligase adenylyltransferase IC784_02980 PF08335 GlnD PII-uridylyltransferase IC784_02985 PF01063 Amino-transferase class IV IC784_02995 PF00884 Sulfatase IC784_03005 PF01522 Polysaccharide deacetylase IC784_03010 PF00535 Glycosyl transferase family 2 IC784_03015 PF13439 Glycosyltransferase Family 4 IC784_03015 PF00534 Glycosyl transferases group 1 IC784_03050 PF11380 Stealth protein CR2, conserved region 2 IC784_03050 PF17103 Stealth protein CR4, conserved region 4 IC784_03050 PF17101 Stealth protein CR1, conserved region 1 IC784_03055 PF00152 tRNA synthetases class II (D, K and N) IC784_03055 PF02938 GAD domain IC784_03055 PF01336 OB-fold nucleic acid binding domain IC784_03065 PF00593 TonB dependent receptor IC784_03065 PF07715 TonB-dependent Receptor Plug Domain IC784_03085 PF06146 Phosphate-starvation-inducible E IC784_03090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_03090 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC784_03090 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_03090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_03095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_03095 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC784_03095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_03095 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_03105 PF00672 HAMP domain IC784_03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_03105 PF00512 His Kinase A (phospho-acceptor) domain IC784_03110 PF00486 Transcriptional regulatory protein, C terminal IC784_03110 PF00072 Response regulator receiver domain IC784_03120 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IC784_03140 PF01923 Cobalamin adenosyltransferase IC784_03145 PF00593 TonB dependent receptor IC784_03145 PF07715 TonB-dependent Receptor Plug Domain IC784_03150 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IC784_03185 PF00290 Tryptophan synthase alpha chain IC784_03190 PF01039 Carboxyl transferase domain IC784_03210 PF00753 Metallo-beta-lactamase superfamily IC784_03220 PF01043 SecA preprotein cross-linking domain IC784_03220 PF07516 SecA Wing and Scaffold domain IC784_03220 PF07517 SecA DEAD-like domain IC784_03220 PF02810 SEC-C motif IC784_03230 PF07690 Major Facilitator Superfamily IC784_03230 PF00083 Sugar (and other) transporter IC784_03235 PF03006 Haemolysin-III related IC784_03245 PF13673 Acetyltransferase (GNAT) domain IC784_03260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC784_03260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC784_03260 PF00378 Enoyl-CoA hydratase/isomerase IC784_03265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC784_03265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC784_03265 PF00378 Enoyl-CoA hydratase/isomerase IC784_03285 PF02311 AraC-like ligand binding domain IC784_03285 PF12833 Helix-turn-helix domain IC784_03295 PF04966 Carbohydrate-selective porin, OprB family IC784_03300 PF01011 PQQ enzyme repeat IC784_03325 PF00114 Pilin (bacterial filament) IC784_03325 PF07963 Prokaryotic N-terminal methylation motif IC784_03330 PF13505 Outer membrane protein beta-barrel domain IC784_03330 PF00691 OmpA family IC784_03340 PF01139 tRNA-splicing ligase RtcB IC784_03345 PF00324 Amino acid permease IC784_03350 PF05175 Methyltransferase small domain IC784_03350 PF08468 Methyltransferase small domain N-terminal IC784_03355 PF00860 Permease family IC784_03365 PF01741 Large-conductance mechanosensitive channel, MscL IC784_03380 PF06827 Zinc finger found in FPG and IleRS IC784_03380 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IC784_03380 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IC784_03385 PF02245 Methylpurine-DNA glycosylase (MPG) IC784_03390 PF07715 TonB-dependent Receptor Plug Domain IC784_03390 PF00593 TonB dependent receptor IC784_03395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC784_03400 PF03547 Membrane transport protein IC784_03410 PF10411 Disulfide bond isomerase protein N-terminus IC784_03410 PF13098 Thioredoxin-like domain IC784_03415 PF01571 Aminomethyltransferase folate-binding domain IC784_03430 PF00860 Permease family IC784_03435 PF01613 Flavin reductase like domain IC784_03440 PF01042 Endoribonuclease L-PSP IC784_03445 PF00857 Isochorismatase family IC784_03450 PF00296 Luciferase-like monooxygenase IC784_03455 PF00881 Nitroreductase family IC784_03460 PF12697 Alpha/beta hydrolase family IC784_03465 PF04343 Protein of unknown function, DUF488 IC784_03470 PF03831 PhnA domain IC784_03470 PF08274 PhnA Zinc-Ribbon IC784_03475 PF07411 Domain of unknown function (DUF1508) IC784_03480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC784_03480 PF04073 Aminoacyl-tRNA editing domain IC784_03480 PF03129 Anticodon binding domain IC784_03500 PF00072 Response regulator receiver domain IC784_03505 PF00072 Response regulator receiver domain IC784_03510 PF01584 CheW-like domain IC784_03520 PF00072 Response regulator receiver domain IC784_03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_03520 PF01584 CheW-like domain IC784_03520 PF01627 Hpt domain IC784_03530 PF06969 HemN C-terminal domain IC784_03530 PF04055 Radical SAM superfamily IC784_03540 PF07687 Peptidase dimerisation domain IC784_03540 PF01546 Peptidase family M20/M25/M40 IC784_03555 PF04304 Protein of unknown function (DUF454) IC784_03560 PF17969 L,D-transpeptidase C-terminal domain IC784_03560 PF03734 L,D-transpeptidase catalytic domain IC784_03600 PF00258 Flavodoxin IC784_03600 PF00667 FAD binding domain IC784_03600 PF00175 Oxidoreductase NAD-binding domain IC784_03615 PF07690 Major Facilitator Superfamily IC784_03620 PF00881 Nitroreductase family IC784_03635 PF01235 Sodium:alanine symporter family IC784_03645 PF00291 Pyridoxal-phosphate dependent enzyme IC784_03645 PF13291 ACT domain IC784_03680 PF02637 GatB domain IC784_03680 PF02934 GatB/GatE catalytic domain IC784_03685 PF01425 Amidase IC784_03690 PF02686 Glu-tRNAGln amidotransferase C subunit IC784_03705 PF04093 rod shape-determining protein MreD IC784_03710 PF02545 Maf-like protein IC784_03715 PF00575 S1 RNA binding domain IC784_03715 PF10150 Ribonuclease E/G family IC784_03725 PF06974 Protein of unknown function (DUF1298) IC784_03725 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IC784_03730 PF01507 Phosphoadenosine phosphosulfate reductase family IC784_03745 PF02525 Flavodoxin-like fold IC784_03775 PF02801 Beta-ketoacyl synthase, C-terminal domain IC784_03775 PF08240 Alcohol dehydrogenase GroES-like domain IC784_03775 PF08990 Erythronolide synthase docking IC784_03775 PF00550 Phosphopantetheine attachment site IC784_03775 PF08659 KR domain IC784_03775 PF09277 Erythronolide synthase, docking IC784_03775 PF16197 Ketoacyl-synthetase C-terminal extension IC784_03775 PF00109 Beta-ketoacyl synthase, N-terminal domain IC784_03775 PF14765 Polyketide synthase dehydratase IC784_03775 PF00698 Acyl transferase domain IC784_03780 PF01965 DJ-1/PfpI family IC784_03800 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IC784_03805 PF09297 NADH pyrophosphatase zinc ribbon domain IC784_03805 PF00293 NUDIX domain IC784_03810 PF00324 Amino acid permease IC784_03815 PF04303 PrpF protein IC784_03825 PF04237 YjbR IC784_03830 PF01145 SPFH domain / Band 7 family IC784_03840 PF01734 Patatin-like phospholipase IC784_03870 PF00486 Transcriptional regulatory protein, C terminal IC784_03870 PF00072 Response regulator receiver domain IC784_03875 PF08521 Two-component sensor kinase N-terminal IC784_03875 PF00512 His Kinase A (phospho-acceptor) domain IC784_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_03885 PF00909 Ammonium Transporter Family IC784_03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_03890 PF03466 LysR substrate binding domain IC784_03905 PF13737 Transposase DDE domain IC784_03935 PF01906 Putative heavy-metal-binding IC784_03940 PF01906 Putative heavy-metal-binding IC784_03945 PF02321 Outer membrane efflux protein IC784_03950 PF00873 AcrB/AcrD/AcrF family IC784_03955 PF00529 HlyD membrane-fusion protein of T1SS IC784_03955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC784_03960 PF01569 PAP2 superfamily IC784_03970 PF00348 Polyprenyl synthetase IC784_03980 PF00829 Ribosomal prokaryotic L21 protein IC784_03985 PF01016 Ribosomal L27 protein IC784_03990 PF03548 Outer membrane lipoprotein carrier protein LolA IC784_04005 PF14824 Sirohaem biosynthesis protein central IC784_04005 PF10414 Sirohaem synthase dimerisation region IC784_04005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IC784_04010 PF00588 SpoU rRNA Methylase family IC784_04015 PF01638 HxlR-like helix-turn-helix IC784_04020 PF03358 NADPH-dependent FMN reductase IC784_04025 PF13520 Amino acid permease IC784_04030 PF00465 Iron-containing alcohol dehydrogenase IC784_04040 PF03099 Biotin/lipoate A/B protein ligase family IC784_04045 PF04359 Protein of unknown function (DUF493) IC784_04050 PF04546 Sigma-70, non-essential region IC784_04050 PF03979 Sigma-70 factor, region 1.1 IC784_04050 PF00140 Sigma-70 factor, region 1.2 IC784_04050 PF04539 Sigma-70 region 3 IC784_04050 PF04545 Sigma-70, region 4 IC784_04050 PF04542 Sigma-70 region 2 IC784_04065 PF00581 Rhodanese-like domain IC784_04065 PF17773 UPF0176 acylphosphatase like domain IC784_04075 PF00285 Citrate synthase, C-terminal domain IC784_04080 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IC784_04085 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IC784_04090 PF02910 Fumarate reductase flavoprotein C-term IC784_04090 PF00890 FAD binding domain IC784_04095 PF13085 2Fe-2S iron-sulfur cluster binding domain IC784_04110 PF02779 Transketolase, pyrimidine binding domain IC784_04110 PF16870 2-oxoglutarate dehydrogenase C-terminal IC784_04110 PF00676 Dehydrogenase E1 component IC784_04110 PF16078 2-oxoglutarate dehydrogenase N-terminus IC784_04115 PF02817 e3 binding domain IC784_04115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC784_04115 PF00364 Biotin-requiring enzyme IC784_04120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC784_04120 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_04130 PF00549 CoA-ligase IC784_04130 PF02629 CoA binding domain IC784_04135 PF00579 tRNA synthetases class I (W and Y) IC784_04140 PF05661 Protein of unknown function (DUF808) IC784_04145 PF04228 Putative neutral zinc metallopeptidase IC784_04150 PF00999 Sodium/hydrogen exchanger family IC784_04185 PF09587 Bacterial capsule synthesis protein PGA_cap IC784_04195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IC784_04205 PF00582 Universal stress protein family IC784_04210 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_04215 PF03449 Transcription elongation factor, N-terminal IC784_04215 PF01272 Transcription elongation factor, GreA/GreB, C-term IC784_04220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC784_04220 PF02142 MGS-like domain IC784_04220 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IC784_04225 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IC784_04225 PF00117 Glutamine amidotransferase class-I IC784_04240 PF01985 CRS1 / YhbY (CRM) domain IC784_04245 PF01728 FtsJ-like methyltransferase IC784_04250 PF01434 Peptidase family M41 IC784_04250 PF00004 ATPase family associated with various cellular activities (AAA) IC784_04250 PF06480 FtsH Extracellular IC784_04250 PF17862 AAA+ lid domain IC784_04255 PF00809 Pterin binding enzyme IC784_04305 PF00083 Sugar (and other) transporter IC784_04310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IC784_04310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IC784_04315 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IC784_04315 PF01266 FAD dependent oxidoreductase IC784_04320 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain IC784_04320 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain IC784_04325 PF00781 Diacylglycerol kinase catalytic domain IC784_04335 PF00166 Chaperonin 10 Kd subunit IC784_04340 PF00118 TCP-1/cpn60 chaperonin family IC784_04345 PF01219 Prokaryotic diacylglycerol kinase IC784_04350 PF00753 Metallo-beta-lactamase superfamily IC784_04355 PF03009 Glycerophosphoryl diester phosphodiesterase family IC784_04370 PF01435 Peptidase family M48 IC784_04375 PF01464 Transglycosylase SLT domain IC784_04380 PF01171 PP-loop family IC784_04395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IC784_04395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IC784_04400 PF01272 Transcription elongation factor, GreA/GreB, C-term IC784_04400 PF03449 Transcription elongation factor, N-terminal IC784_04420 PF13737 Transposase DDE domain IC784_04425 PF00975 Thioesterase domain IC784_04425 PF00501 AMP-binding enzyme IC784_04425 PF13193 AMP-binding enzyme C-terminal domain IC784_04425 PF00550 Phosphopantetheine attachment site IC784_04425 PF00668 Condensation domain IC784_04445 PF13737 Transposase DDE domain IC784_04470 PF09857 Putative toxin of bacterial toxin-antitoxin pair IC784_04520 PF00440 Bacterial regulatory proteins, tetR family IC784_04525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC784_04530 PF00561 alpha/beta hydrolase fold IC784_04530 PF00364 Biotin-requiring enzyme IC784_04535 PF00364 Biotin-requiring enzyme IC784_04535 PF00561 alpha/beta hydrolase fold IC784_04550 PF00529 HlyD membrane-fusion protein of T1SS IC784_04550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC784_04555 PF00873 AcrB/AcrD/AcrF family IC784_04560 PF00881 Nitroreductase family IC784_04575 PF02595 Glycerate kinase family IC784_04585 PF02634 FdhD/NarQ family IC784_04595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IC784_04595 PF11890 Domain of unknown function (DUF3410) IC784_04595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IC784_04615 PF01235 Sodium:alanine symporter family IC784_04620 PF00324 Amino acid permease IC784_04630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IC784_04630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IC784_04635 PF01678 Diaminopimelate epimerase IC784_04650 PF00589 Phage integrase family IC784_04650 PF02899 Phage integrase, N-terminal SAM-like domain IC784_04655 PF01012 Electron transfer flavoprotein domain IC784_04665 PF03989 DNA gyrase C-terminal domain, beta-propeller IC784_04665 PF00521 DNA gyrase/topoisomerase IV, subunit A IC784_04670 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IC784_04700 PF13533 Biotin-lipoyl like IC784_04725 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IC784_04735 PF02687 FtsX-like permease family IC784_04735 PF12704 MacB-like periplasmic core domain IC784_04740 PF00005 ABC transporter IC784_04755 PF06965 Na+/H+ antiporter 1 IC784_04755 PF01343 Peptidase family S49 IC784_04760 PF12697 Alpha/beta hydrolase family IC784_04765 PF00551 Formyl transferase IC784_04770 PF02769 AIR synthase related protein, C-terminal domain IC784_04770 PF00586 AIR synthase related protein, N-terminal domain IC784_04780 PF00308 Bacterial dnaA protein IC784_04780 PF08299 Bacterial dnaA protein helix-turn-helix IC784_04780 PF11638 DnaA N-terminal domain IC784_04810 PF08032 RNA 2'-O ribose methyltransferase substrate binding IC784_04810 PF00588 SpoU rRNA Methylase family IC784_04815 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IC784_04825 PF00691 OmpA family IC784_04840 PF02472 Biopolymer transport protein ExbD/TolR IC784_04845 PF01618 MotA/TolQ/ExbB proton channel family IC784_04850 PF03061 Thioesterase superfamily IC784_04855 PF07687 Peptidase dimerisation domain IC784_04855 PF01546 Peptidase family M20/M25/M40 IC784_04860 PF17864 RuvB AAA lid domain IC784_04860 PF05496 Holliday junction DNA helicase RuvB P-loop domain IC784_04860 PF05491 RuvB C-terminal winged helix domain IC784_04865 PF01330 RuvA N terminal domain IC784_04865 PF07499 RuvA, C-terminal domain IC784_04875 PF01966 HD domain IC784_04905 PF01784 NIF3 (NGG1p interacting factor 3) IC784_04910 PF00378 Enoyl-CoA hydratase/isomerase IC784_04915 PF00293 NUDIX domain IC784_04915 PF01467 Cytidylyltransferase-like IC784_04940 PF00578 AhpC/TSA family IC784_04945 PF06508 Queuosine biosynthesis protein QueC IC784_04955 PF06508 Queuosine biosynthesis protein QueC IC784_04960 PF04055 Radical SAM superfamily IC784_04965 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IC784_04965 PF14602 Hexapeptide repeat of succinyl-transferase IC784_04965 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_04975 PF03466 LysR substrate binding domain IC784_04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_04980 PF00005 ABC transporter IC784_04980 PF12857 TOBE-like domain IC784_04985 PF00528 Binding-protein-dependent transport system inner membrane component IC784_04990 PF00528 Binding-protein-dependent transport system inner membrane component IC784_05010 PF02618 YceG-like family IC784_05015 PF02223 Thymidylate kinase IC784_05025 PF02910 Fumarate reductase flavoprotein C-term IC784_05025 PF00890 FAD binding domain IC784_05030 PF13180 PDZ domain IC784_05040 PF06421 GTP-binding protein LepA C-terminus IC784_05040 PF03144 Elongation factor Tu domain 2 IC784_05040 PF00679 Elongation factor G C-terminus IC784_05040 PF00009 Elongation factor Tu GTP binding domain IC784_05045 PF10502 Signal peptidase, peptidase S26 IC784_05055 PF14622 Ribonuclease-III-like IC784_05055 PF00035 Double-stranded RNA binding motif IC784_05060 PF07650 KH domain IC784_05060 PF01926 50S ribosome-binding GTPase IC784_05070 PF11967 Recombination protein O N terminal IC784_05070 PF02565 Recombination protein O C terminal IC784_05075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IC784_05080 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IC784_05085 PF00106 short chain dehydrogenase IC784_05110 PF00155 Aminotransferase class I and II IC784_05120 PF00990 Diguanylate cyclase, GGDEF domain IC784_05120 PF17151 Periplasmic sensor domain IC784_05130 PF00990 Diguanylate cyclase, GGDEF domain IC784_05150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IC784_05150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IC784_05165 PF01926 50S ribosome-binding GTPase IC784_05165 PF01018 GTP1/OBG IC784_05170 PF01472 PUA domain IC784_05170 PF00696 Amino acid kinase family IC784_05185 PF01207 Dihydrouridine synthase (Dus) IC784_05205 PF02350 UDP-N-acetylglucosamine 2-epimerase IC784_05235 PF03441 FAD binding domain of DNA photolyase IC784_05235 PF00875 DNA photolyase IC784_05240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC784_05265 PF00849 RNA pseudouridylate synthase IC784_05270 PF00180 Isocitrate/isopropylmalate dehydrogenase IC784_05290 PF06779 Uncharacterised MFS-type transporter YbfB IC784_05295 PF03466 LysR substrate binding domain IC784_05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_05300 PF00375 Sodium:dicarboxylate symporter family IC784_05305 PF02567 Phenazine biosynthesis-like protein IC784_05310 PF05193 Peptidase M16 inactive domain IC784_05310 PF00675 Insulinase (Peptidase family M16) IC784_05355 PF00271 Helicase conserved C-terminal domain IC784_05355 PF00176 SNF2 family N-terminal domain IC784_05355 PF18339 RapA N-terminal Tudor like domain 1 IC784_05355 PF18337 RapA N-terminal Tudor like domain IC784_05355 PF12137 RNA polymerase recycling family C-terminal IC784_05365 PF00440 Bacterial regulatory proteins, tetR family IC784_05370 PF00970 Oxidoreductase FAD-binding domain IC784_05370 PF00111 2Fe-2S iron-sulfur cluster binding domain IC784_05370 PF00175 Oxidoreductase NAD-binding domain IC784_05375 PF00487 Fatty acid desaturase IC784_05385 PF00202 Aminotransferase class-III IC784_05390 PF00282 Pyridoxal-dependent decarboxylase conserved domain IC784_05400 PF01037 Lrp/AsnC ligand binding domain IC784_05405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC784_05405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC784_05405 PF00205 Thiamine pyrophosphate enzyme, central domain IC784_05410 PF00324 Amino acid permease IC784_05415 PF12849 PBP superfamily domain IC784_05420 PF00528 Binding-protein-dependent transport system inner membrane component IC784_05425 PF00528 Binding-protein-dependent transport system inner membrane component IC784_05430 PF00005 ABC transporter IC784_05435 PF01343 Peptidase family S49 IC784_05435 PF08496 Peptidase family S49 N-terminal IC784_05450 PF09997 Predicted membrane protein (DUF2238) IC784_05455 PF00206 Lyase IC784_05455 PF08328 Adenylosuccinate lyase C-terminal IC784_05460 PF04356 Protein of unknown function (DUF489) IC784_05470 PF00293 NUDIX domain IC784_05475 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_05480 PF07943 Penicillin-binding protein 5, C-terminal domain IC784_05480 PF00768 D-alanyl-D-alanine carboxypeptidase IC784_05495 PF01975 Survival protein SurE IC784_05500 PF01551 Peptidase family M23 IC784_05500 PF01476 LysM domain IC784_05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_05505 PF03466 LysR substrate binding domain IC784_05515 PF07690 Major Facilitator Superfamily IC784_05520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC784_05525 PF13593 SBF-like CPA transporter family (DUF4137) IC784_05530 PF01197 Ribosomal protein L31 IC784_05535 PF12792 CSS motif domain associated with EAL IC784_05535 PF00563 EAL domain IC784_05545 PF04055 Radical SAM superfamily IC784_05550 PF08207 Elongation factor P (EF-P) KOW-like domain IC784_05550 PF01132 Elongation factor P (EF-P) OB domain IC784_05550 PF09285 Elongation factor P, C-terminal IC784_05555 PF02554 Carbon starvation protein CstA IC784_05555 PF13722 5TM C-terminal transporter carbon starvation CstA IC784_05585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_05585 PF03466 LysR substrate binding domain IC784_05605 PF00883 Cytosol aminopeptidase family, catalytic domain IC784_05605 PF02789 Cytosol aminopeptidase family, N-terminal domain IC784_05615 PF00291 Pyridoxal-phosphate dependent enzyme IC784_05630 PF02678 Pirin IC784_05630 PF17954 Quercetinase C-terminal cupin domain IC784_05640 PF01208 Uroporphyrinogen decarboxylase (URO-D) IC784_05660 PF00144 Beta-lactamase IC784_05665 PF01227 GTP cyclohydrolase I IC784_05670 PF01799 [2Fe-2S] binding domain IC784_05670 PF00111 2Fe-2S iron-sulfur cluster binding domain IC784_05690 PF00218 Indole-3-glycerol phosphate synthase IC784_05695 PF02885 Glycosyl transferase family, helical bundle domain IC784_05695 PF00591 Glycosyl transferase family, a/b domain IC784_05700 PF00117 Glutamine amidotransferase class-I IC784_05715 PF00120 Glutamine synthetase, catalytic domain IC784_05715 PF03951 Glutamine synthetase, beta-Grasp domain IC784_05720 PF04345 Chorismate lyase IC784_05725 PF01040 UbiA prenyltransferase family IC784_05760 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IC784_05760 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IC784_05770 PF13180 PDZ domain IC784_05775 PF12627 Probable RNA and SrmB- binding site of polymerase A IC784_05775 PF01743 Poly A polymerase head domain IC784_05780 PF03949 Malic enzyme, NAD binding domain IC784_05780 PF01515 Phosphate acetyl/butaryl transferase IC784_05780 PF00390 Malic enzyme, N-terminal domain IC784_05785 PF00990 Diguanylate cyclase, GGDEF domain IC784_05785 PF00563 EAL domain IC784_05785 PF03707 Bacterial signalling protein N terminal repeat IC784_05790 PF04452 RNA methyltransferase IC784_05795 PF02219 Methylenetetrahydrofolate reductase IC784_05800 PF05221 S-adenosyl-L-homocysteine hydrolase IC784_05800 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IC784_05815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_05815 PF09317 Domain of unknown function (DUF1974) IC784_05815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_05820 PF04055 Radical SAM superfamily IC784_05835 PF07690 Major Facilitator Superfamily IC784_05845 PF00557 Metallopeptidase family M24 IC784_05850 PF00318 Ribosomal protein S2 IC784_05855 PF00889 Elongation factor TS IC784_05865 PF12833 Helix-turn-helix domain IC784_05875 PF13737 Transposase DDE domain IC784_05895 PF03330 Lytic transglycolase IC784_05895 PF05036 Sporulation related domain IC784_05900 PF13406 Transglycosylase SLT domain IC784_05905 PF01098 Cell cycle protein IC784_05915 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IC784_05915 PF14489 QueF-like protein IC784_05920 PF01061 ABC-2 type transporter IC784_05925 PF00005 ABC transporter IC784_05950 PF00464 Serine hydroxymethyltransferase IC784_05960 PF00873 AcrB/AcrD/AcrF family IC784_05965 PF13533 Biotin-lipoyl like IC784_05970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_05970 PF03466 LysR substrate binding domain IC784_05975 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC784_05980 PF00528 Binding-protein-dependent transport system inner membrane component IC784_05985 PF00528 Binding-protein-dependent transport system inner membrane component IC784_05990 PF00005 ABC transporter IC784_05995 PF00893 Small Multidrug Resistance protein IC784_06000 PF00037 4Fe-4S binding domain IC784_06005 PF01136 Peptidase family U32 IC784_06005 PF16325 Peptidase family U32 C-terminal domain IC784_06010 PF00392 Bacterial regulatory proteins, gntR family IC784_06010 PF00155 Aminotransferase class I and II IC784_06020 PF00970 Oxidoreductase FAD-binding domain IC784_06020 PF00175 Oxidoreductase NAD-binding domain IC784_06035 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IC784_06035 PF00437 Type II/IV secretion system protein IC784_06045 PF00072 Response regulator receiver domain IC784_06045 PF00486 Transcriptional regulatory protein, C terminal IC784_06060 PF00293 NUDIX domain IC784_06070 PF00912 Transglycosylase IC784_06070 PF14814 Bifunctional transglycosylase second domain IC784_06070 PF00905 Penicillin binding protein transpeptidase domain IC784_06075 PF01513 ATP-NAD kinase IC784_06080 PF07023 Protein of unknown function (DUF1315) IC784_06085 PF00591 Glycosyl transferase family, a/b domain IC784_06085 PF02885 Glycosyl transferase family, helical bundle domain IC784_06090 PF00375 Sodium:dicarboxylate symporter family IC784_06095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_06095 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_06095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_06110 PF01842 ACT domain IC784_06110 PF00800 Prephenate dehydratase IC784_06110 PF01817 Chorismate mutase type II IC784_06115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IC784_06125 PF03781 Sulfatase-modifying factor enzyme 1 IC784_06160 PF06956 Regulator of RNA terminal phosphate cyclase IC784_06160 PF00158 Sigma-54 interaction domain IC784_06170 PF03883 Peroxide stress protein YaaA IC784_06175 PF05690 Thiazole biosynthesis protein ThiG IC784_06185 PF04241 Protein of unknown function (DUF423) IC784_06190 PF00140 Sigma-70 factor, region 1.2 IC784_06190 PF04542 Sigma-70 region 2 IC784_06190 PF04545 Sigma-70, region 4 IC784_06200 PF00313 'Cold-shock' DNA-binding domain IC784_06205 PF00271 Helicase conserved C-terminal domain IC784_06205 PF00270 DEAD/DEAH box helicase IC784_06215 PF00881 Nitroreductase family IC784_06220 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IC784_06220 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IC784_06240 PF01180 Dihydroorotate dehydrogenase IC784_06270 PF01435 Peptidase family M48 IC784_06275 PF09424 Yqey-like protein IC784_06280 PF01165 Ribosomal protein S21 IC784_06285 PF00814 Glycoprotease family IC784_06305 PF03793 PASTA domain IC784_06305 PF00069 Protein kinase domain IC784_06375 PF05594 Haemagluttinin repeat IC784_06375 PF04829 Pre-toxin domain with VENN motif IC784_06375 PF13332 Hemagglutinin repeat IC784_06395 PF13737 Transposase DDE domain IC784_06400 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family IC784_06465 PF00202 Aminotransferase class-III IC784_06505 PF00999 Sodium/hydrogen exchanger family IC784_06505 PF02254 TrkA-N domain IC784_06525 PF13737 Transposase DDE domain IC784_06555 PF13737 Transposase DDE domain IC784_06570 PF00440 Bacterial regulatory proteins, tetR family IC784_06580 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IC784_06580 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IC784_06580 PF02805 Metal binding domain of Ada IC784_06580 PF12833 Helix-turn-helix domain IC784_06590 PF00155 Aminotransferase class I and II IC784_06610 PF03466 LysR substrate binding domain IC784_06610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_06620 PF04403 Paraquat-inducible protein A IC784_06635 PF00576 HIUase/Transthyretin family IC784_06645 PF00072 Response regulator receiver domain IC784_06645 PF00486 Transcriptional regulatory protein, C terminal IC784_06650 PF00672 HAMP domain IC784_06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_06650 PF00512 His Kinase A (phospho-acceptor) domain IC784_06690 PF00512 His Kinase A (phospho-acceptor) domain IC784_06690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_06690 PF08521 Two-component sensor kinase N-terminal IC784_06695 PF00072 Response regulator receiver domain IC784_06695 PF00486 Transcriptional regulatory protein, C terminal IC784_06715 PF01177 Asp/Glu/Hydantoin racemase IC784_06720 PF00892 EamA-like transporter family IC784_06725 PF07995 Glucose / Sorbosone dehydrogenase IC784_06735 PF13737 Transposase DDE domain IC784_06755 PF00375 Sodium:dicarboxylate symporter family IC784_06765 PF13737 Transposase DDE domain IC784_06770 PF16123 Hydroxyacylglutathione hydrolase C-terminus IC784_06770 PF00753 Metallo-beta-lactamase superfamily IC784_06775 PF00528 Binding-protein-dependent transport system inner membrane component IC784_06780 PF00005 ABC transporter IC784_06780 PF09383 NIL domain IC784_06785 PF03180 NLPA lipoprotein IC784_06790 PF02844 Phosphoribosylglycinamide synthetase, N domain IC784_06790 PF02843 Phosphoribosylglycinamide synthetase, C domain IC784_06790 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IC784_06795 PF02142 MGS-like domain IC784_06795 PF01808 AICARFT/IMPCHase bienzyme IC784_06800 PF02954 Bacterial regulatory protein, Fis family IC784_06820 PF13932 GidA associated domain IC784_06820 PF01134 Glucose inhibited division protein A IC784_06830 PF14403 Circularly permuted ATP-grasp type 2 IC784_06840 PF01841 Transglutaminase-like superfamily IC784_06840 PF08379 Bacterial transglutaminase-like N-terminal region IC784_06850 PF00842 Alanine racemase, C-terminal domain IC784_06850 PF01168 Alanine racemase, N-terminal domain IC784_06860 PF03948 Ribosomal protein L9, C-terminal domain IC784_06860 PF01281 Ribosomal protein L9, N-terminal domain IC784_06865 PF01084 Ribosomal protein S18 IC784_06870 PF01250 Ribosomal protein S6 IC784_06875 PF01040 UbiA prenyltransferase family IC784_06880 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IC784_06885 PF00510 Cytochrome c oxidase subunit III IC784_06890 PF00115 Cytochrome C and Quinol oxidase polypeptide I IC784_06895 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IC784_06895 PF06481 COX Aromatic Rich Motif IC784_06905 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IC784_06905 PF02896 PEP-utilising enzyme, TIM barrel domain IC784_06905 PF00391 PEP-utilising enzyme, mobile domain IC784_06910 PF03618 Kinase/pyrophosphorylase IC784_06925 PF00535 Glycosyl transferase family 2 IC784_06930 PF13994 PgaD-like protein IC784_06940 PF00296 Luciferase-like monooxygenase IC784_06955 PF00472 RF-1 domain IC784_06955 PF03462 PCRF domain IC784_06960 PF17827 PrmC N-terminal domain IC784_06960 PF13847 Methyltransferase domain IC784_06965 PF12833 Helix-turn-helix domain IC784_06970 PF00106 short chain dehydrogenase IC784_06985 PF01613 Flavin reductase like domain IC784_06990 PF00899 ThiF family IC784_06995 PF03109 ABC1 family IC784_07010 PF03814 Potassium-transporting ATPase A subunit IC784_07020 PF02669 K+-transporting ATPase, c chain IC784_07025 PF02702 Osmosensitive K+ channel His kinase sensor domain IC784_07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_07025 PF13493 Domain of unknown function (DUF4118) IC784_07025 PF00512 His Kinase A (phospho-acceptor) domain IC784_07030 PF00072 Response regulator receiver domain IC784_07030 PF00486 Transcriptional regulatory protein, C terminal IC784_07035 PF00120 Glutamine synthetase, catalytic domain IC784_07050 PF07690 Major Facilitator Superfamily IC784_07055 PF07244 Surface antigen variable number repeat IC784_07055 PF01103 Surface antigen IC784_07055 PF17243 POTRA domain TamA domain 1 IC784_07075 PF11791 Aconitate B N-terminal domain IC784_07075 PF00330 Aconitase family (aconitate hydratase) IC784_07075 PF06434 Aconitate hydratase 2 N-terminus IC784_07085 PF00520 Ion transport protein IC784_07085 PF00027 Cyclic nucleotide-binding domain IC784_07090 PF07690 Major Facilitator Superfamily IC784_07100 PF03466 LysR substrate binding domain IC784_07100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_07105 PF04284 Protein of unknown function (DUF441) IC784_07115 PF01479 S4 domain IC784_07115 PF00849 RNA pseudouridylate synthase IC784_07130 PF00849 RNA pseudouridylate synthase IC784_07130 PF01479 S4 domain IC784_07140 PF08676 MutL C terminal dimerisation domain IC784_07140 PF01119 DNA mismatch repair protein, C-terminal domain IC784_07150 PF17209 Hfq protein IC784_07160 PF00881 Nitroreductase family IC784_07170 PF00149 Calcineurin-like phosphoesterase IC784_07175 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IC784_07185 PF00117 Glutamine amidotransferase class-I IC784_07185 PF00958 GMP synthase C terminal domain IC784_07185 PF02540 NAD synthase IC784_07190 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IC784_07195 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IC784_07235 PF06445 GyrI-like small molecule binding domain IC784_07260 PF13737 Transposase DDE domain IC784_07285 PF02798 Glutathione S-transferase, N-terminal domain IC784_07305 PF01037 Lrp/AsnC ligand binding domain IC784_07310 PF01810 LysE type translocator IC784_07335 PF13276 HTH-like domain IC784_07335 PF00665 Integrase core domain IC784_07335 PF13333 Integrase core domain IC784_07350 PF00593 TonB dependent receptor IC784_07350 PF07715 TonB-dependent Receptor Plug Domain IC784_07365 PF07690 Major Facilitator Superfamily IC784_07370 PF04183 IucA / IucC family IC784_07370 PF06276 Ferric iron reductase FhuF-like transporter IC784_07375 PF02423 Ornithine cyclodeaminase/mu-crystallin family IC784_07380 PF00291 Pyridoxal-phosphate dependent enzyme IC784_07390 PF00924 Mechanosensitive ion channel IC784_07435 PF00005 ABC transporter IC784_07435 PF16326 ABC transporter C-terminal domain IC784_07435 PF12848 ABC transporter IC784_07440 PF00582 Universal stress protein family IC784_07460 PF00689 Cation transporting ATPase, C-terminus IC784_07460 PF00690 Cation transporter/ATPase, N-terminus IC784_07465 PF02308 MgtC family IC784_07470 PF03594 Benzoate membrane transport protein IC784_07475 PF01037 Lrp/AsnC ligand binding domain IC784_07480 PF01810 LysE type translocator IC784_07490 PF03466 LysR substrate binding domain IC784_07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_07500 PF02803 Thiolase, C-terminal domain IC784_07500 PF00108 Thiolase, N-terminal domain IC784_07510 PF01575 MaoC like domain IC784_07525 PF07690 Major Facilitator Superfamily IC784_07540 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IC784_07540 PF12170 DNA polymerase III tau subunit V interacting with alpha IC784_07540 PF12169 DNA polymerase III subunits gamma and tau domain III IC784_07550 PF03061 Thioesterase superfamily IC784_07555 PF00465 Iron-containing alcohol dehydrogenase IC784_07570 PF01638 HxlR-like helix-turn-helix IC784_07580 PF01451 Low molecular weight phosphotyrosine protein phosphatase IC784_07605 PF13737 Transposase DDE domain IC784_07620 PF01645 Conserved region in glutamate synthase IC784_07640 PF13953 PapC C-terminal domain IC784_07640 PF00577 Outer membrane usher protein IC784_07640 PF13954 PapC N-terminal domain IC784_07660 PF12832 MFS_1 like family IC784_07670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC784_07670 PF00289 Biotin carboxylase, N-terminal domain IC784_07670 PF02785 Biotin carboxylase C-terminal domain IC784_07675 PF00364 Biotin-requiring enzyme IC784_07680 PF01220 Dehydroquinase class II IC784_07685 PF11799 impB/mucB/samB family C-terminal domain IC784_07685 PF00817 impB/mucB/samB family IC784_07685 PF13438 Domain of unknown function (DUF4113) IC784_07690 PF00005 ABC transporter IC784_07695 PF00072 Response regulator receiver domain IC784_07695 PF00486 Transcriptional regulatory protein, C terminal IC784_07705 PF13806 Rieske-like [2Fe-2S] domain IC784_07705 PF04324 BFD-like [2Fe-2S] binding domain IC784_07705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IC784_07705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IC784_07705 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_07705 PF18267 Rubredoxin NAD+ reductase C-terminal domain IC784_07710 PF04324 BFD-like [2Fe-2S] binding domain IC784_07710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IC784_07710 PF18267 Rubredoxin NAD+ reductase C-terminal domain IC784_07710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IC784_07710 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_07720 PF12804 MobA-like NTP transferase domain IC784_07730 PF06463 Molybdenum Cofactor Synthesis C IC784_07730 PF04055 Radical SAM superfamily IC784_07740 PF02391 MoaE protein IC784_07745 PF01967 MoaC family IC784_07745 PF00994 Probable molybdopterin binding domain IC784_07750 PF03453 MoeA N-terminal region (domain I and II) IC784_07750 PF00994 Probable molybdopterin binding domain IC784_07750 PF03454 MoeA C-terminal region (domain IV) IC784_07755 PF01638 HxlR-like helix-turn-helix IC784_07760 PF00392 Bacterial regulatory proteins, gntR family IC784_07760 PF00155 Aminotransferase class I and II IC784_07765 PF00892 EamA-like transporter family IC784_07785 PF02635 DsrE/DsrF-like family IC784_07790 PF16363 GDP-mannose 4,6 dehydratase IC784_07795 PF00206 Lyase IC784_07795 PF10415 Fumarase C C-terminus IC784_07815 PF01266 FAD dependent oxidoreductase IC784_07825 PF02542 YgbB family IC784_07835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IC784_07835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IC784_07840 PF00440 Bacterial regulatory proteins, tetR family IC784_07845 PF00158 Sigma-54 interaction domain IC784_07845 PF02954 Bacterial regulatory protein, Fis family IC784_07845 PF00072 Response regulator receiver domain IC784_07850 PF00512 His Kinase A (phospho-acceptor) domain IC784_07850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_07850 PF00989 PAS fold IC784_07855 PF18693 TRAM domain IC784_07855 PF00919 Uncharacterized protein family UPF0004 IC784_07855 PF04055 Radical SAM superfamily IC784_07860 PF00696 Amino acid kinase family IC784_07865 PF01765 Ribosome recycling factor IC784_07870 PF01255 Putative undecaprenyl diphosphate synthase IC784_07880 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IC784_07880 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IC784_07880 PF13288 DXP reductoisomerase C-terminal domain IC784_07890 PF01103 Surface antigen IC784_07890 PF07244 Surface antigen variable number repeat IC784_07900 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_07900 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IC784_07905 PF07977 FabA-like domain IC784_07910 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IC784_07910 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_07925 PF02631 RecX family IC784_07930 PF00154 recA bacterial DNA recombination protein IC784_07935 PF01479 S4 domain IC784_07940 PF13419 Haloacid dehalogenase-like hydrolase IC784_07955 PF01037 Lrp/AsnC ligand binding domain IC784_07965 PF00324 Amino acid permease IC784_07980 PF01740 STAS domain IC784_07980 PF00916 Sulfate permease family IC784_07985 PF07995 Glucose / Sorbosone dehydrogenase IC784_07995 PF00990 Diguanylate cyclase, GGDEF domain IC784_07995 PF03707 Bacterial signalling protein N terminal repeat IC784_07995 PF00563 EAL domain IC784_08015 PF00294 pfkB family carbohydrate kinase IC784_08045 PF05525 Branched-chain amino acid transport protein IC784_08050 PF00557 Metallopeptidase family M24 IC784_08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_08055 PF03466 LysR substrate binding domain IC784_08065 PF00462 Glutaredoxin IC784_08070 PF00202 Aminotransferase class-III IC784_08075 PF00571 CBS domain IC784_08100 PF00448 SRP54-type protein, GTPase domain IC784_08100 PF02881 SRP54-type protein, helical bundle domain IC784_08125 PF08173 Membrane bound YbgT-like protein IC784_08130 PF02322 Cytochrome bd terminal oxidase subunit II IC784_08135 PF01654 Cytochrome bd terminal oxidase subunit I IC784_08145 PF07290 Protein of unknown function (DUF1449) IC784_08155 PF00294 pfkB family carbohydrate kinase IC784_08165 PF05193 Peptidase M16 inactive domain IC784_08165 PF00675 Insulinase (Peptidase family M16) IC784_08165 PF08367 Peptidase M16C associated IC784_08170 PF02253 Phospholipase A1 IC784_08175 PF02386 Cation transport protein IC784_08180 PF02254 TrkA-N domain IC784_08180 PF02080 TrkA-C domain IC784_08185 PF00585 C-terminal regulatory domain of Threonine dehydratase IC784_08185 PF00291 Pyridoxal-phosphate dependent enzyme IC784_08190 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IC784_08215 PF02617 ATP-dependent Clp protease adaptor protein ClpS IC784_08220 PF10431 C-terminal, D2-small domain, of ClpB protein IC784_08220 PF07724 AAA domain (Cdc48 subfamily) IC784_08220 PF17871 AAA lid domain IC784_08220 PF00004 ATPase family associated with various cellular activities (AAA) IC784_08220 PF02861 Clp amino terminal domain, pathogenicity island component IC784_08225 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IC784_08230 PF00793 DAHP synthetase I family IC784_08280 PF00793 DAHP synthetase I family IC784_08285 PF00113 Enolase, C-terminal TIM barrel domain IC784_08285 PF03952 Enolase, N-terminal domain IC784_08290 PF04239 Protein of unknown function (DUF421) IC784_08300 PF04977 Septum formation initiator IC784_08310 PF01144 Coenzyme A transferase IC784_08315 PF01144 Coenzyme A transferase IC784_08320 PF02803 Thiolase, C-terminal domain IC784_08320 PF00108 Thiolase, N-terminal domain IC784_08325 PF10397 Adenylosuccinate lyase C-terminus IC784_08325 PF00206 Lyase IC784_08330 PF00561 alpha/beta hydrolase fold IC784_08335 PF07690 Major Facilitator Superfamily IC784_08340 PF02627 Carboxymuconolactone decarboxylase family IC784_08345 PF00775 Dioxygenase IC784_08345 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IC784_08350 PF00775 Dioxygenase IC784_08355 PF01487 Type I 3-dehydroquinase IC784_08360 PF05048 Periplasmic copper-binding protein (NosD) IC784_08365 PF04966 Carbohydrate-selective porin, OprB family IC784_08370 PF13360 PQQ-like domain IC784_08370 PF01011 PQQ enzyme repeat IC784_08380 PF04143 Sulphur transport IC784_08390 PF00753 Metallo-beta-lactamase superfamily IC784_08395 PF09339 IclR helix-turn-helix domain IC784_08395 PF01614 Bacterial transcriptional regulator IC784_08400 PF03466 LysR substrate binding domain IC784_08400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_08405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_08405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_08405 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_08420 PF00106 short chain dehydrogenase IC784_08430 PF07690 Major Facilitator Superfamily IC784_08460 PF00355 Rieske [2Fe-2S] domain IC784_08460 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC784_08475 PF00111 2Fe-2S iron-sulfur cluster binding domain IC784_08475 PF00175 Oxidoreductase NAD-binding domain IC784_08480 PF01613 Flavin reductase like domain IC784_08485 PF02311 AraC-like ligand binding domain IC784_08485 PF12833 Helix-turn-helix domain IC784_08490 PF07833 Copper amine oxidase N-terminal domain IC784_08490 PF02727 Copper amine oxidase, N2 domain IC784_08490 PF02728 Copper amine oxidase, N3 domain IC784_08490 PF01179 Copper amine oxidase, enzyme domain IC784_08495 PF00171 Aldehyde dehydrogenase family IC784_08500 PF12146 Serine aminopeptidase, S33 IC784_08505 PF02803 Thiolase, C-terminal domain IC784_08505 PF00108 Thiolase, N-terminal domain IC784_08510 PF01144 Coenzyme A transferase IC784_08515 PF01144 Coenzyme A transferase IC784_08520 PF04444 Catechol dioxygenase N terminus IC784_08520 PF00775 Dioxygenase IC784_08525 PF02426 Muconolactone delta-isomerase IC784_08530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IC784_08530 PF13378 Enolase C-terminal domain-like IC784_08535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_08535 PF03466 LysR substrate binding domain IC784_08545 PF01557 Fumarylacetoacetate (FAA) hydrolase family IC784_08550 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation IC784_08550 PF01118 Semialdehyde dehydrogenase, NAD binding domain IC784_08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_08570 PF03466 LysR substrate binding domain IC784_08575 PF00355 Rieske [2Fe-2S] domain IC784_08575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC784_08580 PF00866 Ring hydroxylating beta subunit IC784_08585 PF00355 Rieske [2Fe-2S] domain IC784_08590 PF00106 short chain dehydrogenase IC784_08595 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IC784_08605 PF13737 Transposase DDE domain IC784_08610 PF07690 Major Facilitator Superfamily IC784_08615 PF07690 Major Facilitator Superfamily IC784_08620 PF03466 LysR substrate binding domain IC784_08620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_08635 PF00561 alpha/beta hydrolase fold IC784_08640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC784_08640 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_08645 PF00106 short chain dehydrogenase IC784_08650 PF01872 RibD C-terminal domain IC784_08660 PF09278 MerR, DNA binding IC784_08660 PF00376 MerR family regulatory protein IC784_08670 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_08685 PF12706 Beta-lactamase superfamily domain IC784_08690 PF08359 YsiA-like protein, C-terminal region IC784_08690 PF00440 Bacterial regulatory proteins, tetR family IC784_08700 PF07715 TonB-dependent Receptor Plug Domain IC784_08700 PF00593 TonB dependent receptor IC784_08705 PF12833 Helix-turn-helix domain IC784_08705 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC784_08715 PF06314 Acetoacetate decarboxylase (ADC) IC784_08725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC784_08970 PF16970 Type-1 fimbrial protein, A IC784_08975 PF02753 Pili assembly chaperone PapD, C-terminal domain IC784_08975 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IC784_08995 PF00107 Zinc-binding dehydrogenase IC784_08995 PF08240 Alcohol dehydrogenase GroES-like domain IC784_09005 PF00199 Catalase IC784_09015 PF02548 Ketopantoate hydroxymethyltransferase IC784_09020 PF13091 PLD-like domain IC784_09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_09030 PF00512 His Kinase A (phospho-acceptor) domain IC784_09030 PF02702 Osmosensitive K+ channel His kinase sensor domain IC784_09030 PF13493 Domain of unknown function (DUF4118) IC784_09035 PF00486 Transcriptional regulatory protein, C terminal IC784_09035 PF00072 Response regulator receiver domain IC784_09040 PF00529 HlyD membrane-fusion protein of T1SS IC784_09040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC784_09045 PF00873 AcrB/AcrD/AcrF family IC784_09060 PF01244 Membrane dipeptidase (Peptidase family M19) IC784_09065 PF13186 Iron-sulfur cluster-binding domain IC784_09065 PF04055 Radical SAM superfamily IC784_09070 PF05402 Coenzyme PQQ synthesis protein D (PqqD) IC784_09075 PF03070 TENA/THI-4/PQQC family IC784_09080 PF12706 Beta-lactamase superfamily domain IC784_09085 PF08042 PqqA family IC784_09105 PF00593 TonB dependent receptor IC784_09105 PF07715 TonB-dependent Receptor Plug Domain IC784_09110 PF00873 AcrB/AcrD/AcrF family IC784_09115 PF00857 Isochorismatase family IC784_09115 PF00550 Phosphopantetheine attachment site IC784_09120 PF13193 AMP-binding enzyme C-terminal domain IC784_09120 PF00501 AMP-binding enzyme IC784_09130 PF00106 short chain dehydrogenase IC784_09140 PF03621 MbtH-like protein IC784_09150 PF05977 Transmembrane secretion effector IC784_09155 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IC784_09155 PF01648 4'-phosphopantetheinyl transferase superfamily IC784_09170 PF03459 TOBE domain IC784_09170 PF00005 ABC transporter IC784_09175 PF00528 Binding-protein-dependent transport system inner membrane component IC784_09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_09185 PF03459 TOBE domain IC784_09190 PF00355 Rieske [2Fe-2S] domain IC784_09190 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC784_09195 PF00866 Ring hydroxylating beta subunit IC784_09200 PF00111 2Fe-2S iron-sulfur cluster binding domain IC784_09200 PF00970 Oxidoreductase FAD-binding domain IC784_09200 PF00175 Oxidoreductase NAD-binding domain IC784_09205 PF14525 AraC-binding-like domain IC784_09205 PF12833 Helix-turn-helix domain IC784_09230 PF01738 Dienelactone hydrolase family IC784_09245 PF06719 AraC-type transcriptional regulator N-terminus IC784_09245 PF12833 Helix-turn-helix domain IC784_09260 PF00753 Metallo-beta-lactamase superfamily IC784_09285 PF03466 LysR substrate binding domain IC784_09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_09290 PF01144 Coenzyme A transferase IC784_09295 PF01144 Coenzyme A transferase IC784_09300 PF02667 Short chain fatty acid transporter IC784_09310 PF03466 LysR substrate binding domain IC784_09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_09315 PF03466 LysR substrate binding domain IC784_09320 PF13737 Transposase DDE domain IC784_09335 PF10415 Fumarase C C-terminus IC784_09335 PF00206 Lyase IC784_09340 PF07715 TonB-dependent Receptor Plug Domain IC784_09340 PF00593 TonB dependent receptor IC784_09345 PF00083 Sugar (and other) transporter IC784_09355 PF12833 Helix-turn-helix domain IC784_09375 PF00753 Metallo-beta-lactamase superfamily IC784_09375 PF04273 Putative phosphatase (DUF442) IC784_09385 PF00158 Sigma-54 interaction domain IC784_09385 PF02954 Bacterial regulatory protein, Fis family IC784_09385 PF00072 Response regulator receiver domain IC784_09390 PF01062 Bestrophin, RFP-TM, chloride channel IC784_09395 PF08240 Alcohol dehydrogenase GroES-like domain IC784_09395 PF00107 Zinc-binding dehydrogenase IC784_09400 PF00106 short chain dehydrogenase IC784_09405 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_09405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC784_09410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC784_09410 PF00364 Biotin-requiring enzyme IC784_09410 PF02817 e3 binding domain IC784_09415 PF02780 Transketolase, C-terminal domain IC784_09415 PF02779 Transketolase, pyrimidine binding domain IC784_09420 PF00676 Dehydrogenase E1 component IC784_09425 PF04055 Radical SAM superfamily IC784_09440 PF00990 Diguanylate cyclase, GGDEF domain IC784_09440 PF08448 PAS fold IC784_09445 PF01264 Chorismate synthase IC784_09450 PF05175 Methyltransferase small domain IC784_09455 PF00291 Pyridoxal-phosphate dependent enzyme IC784_09465 PF17862 AAA+ lid domain IC784_09465 PF01434 Peptidase family M41 IC784_09465 PF00004 ATPase family associated with various cellular activities (AAA) IC784_09475 PF05166 YcgL domain IC784_09495 PF01612 3'-5' exonuclease IC784_09495 PF00570 HRDC domain IC784_09500 PF02132 RecR protein IC784_09500 PF13662 Toprim domain IC784_09505 PF02575 YbaB/EbfC DNA-binding family IC784_09515 PF01053 Cys/Met metabolism PLP-dependent enzyme IC784_09525 PF08241 Methyltransferase domain IC784_09550 PF01230 HIT domain IC784_09575 PF02684 Lipid-A-disaccharide synthetase IC784_09580 PF07715 TonB-dependent Receptor Plug Domain IC784_09580 PF00593 TonB dependent receptor IC784_09600 PF01925 Sulfite exporter TauE/SafE IC784_09605 PF00793 DAHP synthetase I family IC784_09610 PF02654 Cobalamin-5-phosphate synthase IC784_09625 PF02277 Phosphoribosyltransferase IC784_09630 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IC784_09645 PF04073 Aminoacyl-tRNA editing domain IC784_09660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_09660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_09660 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_09670 PF00487 Fatty acid desaturase IC784_09675 PF12833 Helix-turn-helix domain IC784_09675 PF12852 Cupin IC784_09680 PF00639 PPIC-type PPIASE domain IC784_09680 PF09312 SurA N-terminal domain IC784_09700 PF02082 Transcriptional regulator IC784_09710 PF01592 NifU-like N terminal domain IC784_09715 PF01521 Iron-sulphur cluster biosynthesis IC784_09720 PF07743 HSCB C-terminal oligomerisation domain IC784_09720 PF00226 DnaJ domain IC784_09730 PF00111 2Fe-2S iron-sulfur cluster binding domain IC784_09735 PF00211 Adenylate and Guanylate cyclase catalytic domain IC784_09745 PF00271 Helicase conserved C-terminal domain IC784_09745 PF03461 TRCF domain IC784_09745 PF00270 DEAD/DEAH box helicase IC784_09745 PF02559 CarD-like/TRCF domain IC784_09745 PF17757 UvrB interaction domain IC784_09765 PF03737 Aldolase/RraA IC784_09770 PF13460 NAD(P)H-binding IC784_09775 PF01649 Ribosomal protein S20 IC784_09785 PF00459 Inositol monophosphatase family IC784_09800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC784_09800 PF00005 ABC transporter IC784_09805 PF00528 Binding-protein-dependent transport system inner membrane component IC784_09810 PF00528 Binding-protein-dependent transport system inner membrane component IC784_09850 PF01618 MotA/TolQ/ExbB proton channel family IC784_09855 PF02472 Biopolymer transport protein ExbD/TolR IC784_09860 PF02472 Biopolymer transport protein ExbD/TolR IC784_09870 PF01274 Malate synthase IC784_09875 PF03969 AFG1-like ATPase IC784_09885 PF00743 Flavin-binding monooxygenase-like IC784_09890 PF03956 Lysine exporter LysO IC784_09895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IC784_09905 PF00216 Bacterial DNA-binding protein IC784_09910 PF00575 S1 RNA binding domain IC784_09915 PF02224 Cytidylate kinase IC784_09925 PF14437 MafB19-like deaminase IC784_09935 PF03167 Uracil DNA glycosylase superfamily IC784_09945 PF03934 Type II secretion system (T2SS), protein K IC784_09955 PF07963 Prokaryotic N-terminal methylation motif IC784_09955 PF02501 Type II secretion system (T2SS), protein I IC784_09970 PF01026 TatD related DNase IC784_09980 PF09115 DNA polymerase III, delta subunit, C terminal IC784_09985 PF02348 Cytidylyltransferase IC784_09990 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IC784_09995 PF00005 ABC transporter IC784_09995 PF00664 ABC transporter transmembrane region IC784_10005 PF01618 MotA/TolQ/ExbB proton channel family IC784_10010 PF17762 HTH domain found in ParB protein IC784_10010 PF02195 ParB-like nuclease domain IC784_10015 PF13614 AAA domain IC784_10020 PF02527 rRNA small subunit methyltransferase G IC784_10025 PF00483 Nucleotidyl transferase IC784_10030 PF01636 Phosphotransferase enzyme family IC784_10035 PF04453 LPS transport system D IC784_10035 PF03968 OstA-like protein IC784_10045 PF01116 Fructose-bisphosphate aldolase class-II IC784_10055 PF00162 Phosphoglycerate kinase IC784_10065 PF02545 Maf-like protein IC784_10085 PF00375 Sodium:dicarboxylate symporter family IC784_10090 PF06912 Protein of unknown function (DUF1275) IC784_10095 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IC784_10110 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC784_10110 PF12833 Helix-turn-helix domain IC784_10115 PF01597 Glycine cleavage H-protein IC784_10120 PF02146 Sir2 family IC784_10125 PF00474 Sodium:solute symporter family IC784_10130 PF01037 Lrp/AsnC ligand binding domain IC784_10135 PF00171 Aldehyde dehydrogenase family IC784_10135 PF01619 Proline dehydrogenase IC784_10135 PF14850 DNA-binding domain of Proline dehydrogenase IC784_10135 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IC784_10140 PF04229 GrpB protein IC784_10145 PF05958 tRNA (Uracil-5-)-methyltransferase IC784_10155 PF09992 Phosphodiester glycosidase IC784_10165 PF04264 YceI-like domain IC784_10180 PF02779 Transketolase, pyrimidine binding domain IC784_10180 PF02780 Transketolase, C-terminal domain IC784_10180 PF00456 Transketolase, thiamine diphosphate binding domain IC784_10185 PF02773 S-adenosylmethionine synthetase, C-terminal domain IC784_10185 PF02772 S-adenosylmethionine synthetase, central domain IC784_10185 PF00438 S-adenosylmethionine synthetase, N-terminal domain IC784_10215 PF02075 Crossover junction endodeoxyribonuclease RuvC IC784_10225 PF08331 Domain of unknown function (DUF1730) IC784_10245 PF16970 Type-1 fimbrial protein, A IC784_10250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IC784_10250 PF02753 Pili assembly chaperone PapD, C-terminal domain IC784_10255 PF13953 PapC C-terminal domain IC784_10255 PF13954 PapC N-terminal domain IC784_10255 PF00577 Outer membrane usher protein IC784_10270 PF00892 EamA-like transporter family IC784_10290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_10290 PF03466 LysR substrate binding domain IC784_10310 PF03472 Autoinducer binding domain IC784_10310 PF00196 Bacterial regulatory proteins, luxR family IC784_10320 PF00440 Bacterial regulatory proteins, tetR family IC784_10330 PF01709 Transcriptional regulator IC784_10335 PF01037 Lrp/AsnC ligand binding domain IC784_10345 PF00005 ABC transporter IC784_10355 PF00528 Binding-protein-dependent transport system inner membrane component IC784_10385 PF03180 NLPA lipoprotein IC784_10390 PF09383 NIL domain IC784_10390 PF00005 ABC transporter IC784_10395 PF00528 Binding-protein-dependent transport system inner membrane component IC784_10400 PF01926 50S ribosome-binding GTPase IC784_10400 PF06071 Protein of unknown function (DUF933) IC784_10425 PF03591 AzlC protein IC784_10430 PF05437 Branched-chain amino acid transport protein (AzlD) IC784_10440 PF02222 ATP-grasp domain IC784_10445 PF01909 Nucleotidyltransferase domain IC784_10445 PF01966 HD domain IC784_10445 PF08335 GlnD PII-uridylyltransferase IC784_10450 PF00155 Aminotransferase class I and II IC784_10460 PF12852 Cupin IC784_10460 PF12833 Helix-turn-helix domain IC784_10465 PF00255 Glutathione peroxidase IC784_10470 PF01641 SelR domain IC784_10475 PF00155 Aminotransferase class I and II IC784_10480 PF00375 Sodium:dicarboxylate symporter family IC784_10490 PF07733 Bacterial DNA polymerase III alpha NTPase domain IC784_10490 PF01336 OB-fold nucleic acid binding domain IC784_10490 PF02811 PHP domain IC784_10490 PF14579 Helix-hairpin-helix motif IC784_10490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IC784_10495 PF00588 SpoU rRNA Methylase family IC784_10500 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_10515 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_10515 PF13192 Thioredoxin domain IC784_10535 PF03358 NADPH-dependent FMN reductase IC784_10540 PF01758 Sodium Bile acid symporter family IC784_10545 PF01022 Bacterial regulatory protein, arsR family IC784_10550 PF03960 ArsC family IC784_10570 PF03466 LysR substrate binding domain IC784_10570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_10580 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IC784_10585 PF01177 Asp/Glu/Hydantoin racemase IC784_10590 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC784_10595 PF00528 Binding-protein-dependent transport system inner membrane component IC784_10600 PF00005 ABC transporter IC784_10625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_10625 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC784_10625 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_10650 PF00155 Aminotransferase class I and II IC784_10650 PF00392 Bacterial regulatory proteins, gntR family IC784_10665 PF00392 Bacterial regulatory proteins, gntR family IC784_10665 PF00155 Aminotransferase class I and II IC784_10670 PF04172 LrgB-like family IC784_10675 PF03788 LrgA family IC784_10680 PF03466 LysR substrate binding domain IC784_10680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_10685 PF14834 Glutathione S-transferase, C-terminal domain IC784_10685 PF02798 Glutathione S-transferase, N-terminal domain IC784_10690 PF02798 Glutathione S-transferase, N-terminal domain IC784_10710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_10710 PF03466 LysR substrate binding domain IC784_10720 PF00581 Rhodanese-like domain IC784_10725 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_10735 PF00266 Aminotransferase class-V IC784_10740 PF01810 LysE type translocator IC784_10745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_10745 PF03466 LysR substrate binding domain IC784_10755 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC784_10760 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC784_10765 PF00005 ABC transporter IC784_10770 PF00528 Binding-protein-dependent transport system inner membrane component IC784_10775 PF00528 Binding-protein-dependent transport system inner membrane component IC784_10790 PF00072 Response regulator receiver domain IC784_10805 PF01037 Lrp/AsnC ligand binding domain IC784_10805 PF13404 AsnC-type helix-turn-helix domain IC784_10815 PF00717 Peptidase S24-like IC784_10825 PF06628 Catalase-related immune-responsive IC784_10825 PF00199 Catalase IC784_10825 PF18011 C-terminal domain found in long catalases IC784_10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_10865 PF03466 LysR substrate binding domain IC784_10875 PF07690 Major Facilitator Superfamily IC784_10890 PF00501 AMP-binding enzyme IC784_10890 PF13193 AMP-binding enzyme C-terminal domain IC784_10895 PF00440 Bacterial regulatory proteins, tetR family IC784_10900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_10900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_10900 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_10905 PF01039 Carboxyl transferase domain IC784_10910 PF00378 Enoyl-CoA hydratase/isomerase IC784_10915 PF00289 Biotin carboxylase, N-terminal domain IC784_10915 PF18140 Propionyl-coenzyme A carboxylase BT domain IC784_10915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC784_10915 PF00364 Biotin-requiring enzyme IC784_10915 PF02785 Biotin carboxylase C-terminal domain IC784_10920 PF00682 HMGL-like IC784_10940 PF13419 Haloacid dehalogenase-like hydrolase IC784_10945 PF00266 Aminotransferase class-V IC784_10950 PF01266 FAD dependent oxidoreductase IC784_10955 PF00528 Binding-protein-dependent transport system inner membrane component IC784_10960 PF08402 TOBE domain IC784_10960 PF00005 ABC transporter IC784_10970 PF00392 Bacterial regulatory proteins, gntR family IC784_10970 PF07702 UTRA domain IC784_10975 PF01168 Alanine racemase, N-terminal domain IC784_10975 PF00842 Alanine racemase, C-terminal domain IC784_10985 PF09339 IclR helix-turn-helix domain IC784_10985 PF01614 Bacterial transcriptional regulator IC784_10990 PF02525 Flavodoxin-like fold IC784_11000 PF16295 Tetracyclin repressor-like, C-terminal domain IC784_11000 PF00440 Bacterial regulatory proteins, tetR family IC784_11010 PF13333 Integrase core domain IC784_11010 PF13276 HTH-like domain IC784_11010 PF00665 Integrase core domain IC784_11015 PF12146 Serine aminopeptidase, S33 IC784_11020 PF12146 Serine aminopeptidase, S33 IC784_11025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_11025 PF03466 LysR substrate binding domain IC784_11030 PF13520 Amino acid permease IC784_11035 PF01636 Phosphotransferase enzyme family IC784_11045 PF12833 Helix-turn-helix domain IC784_11045 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC784_11050 PF00202 Aminotransferase class-III IC784_11055 PF16295 Tetracyclin repressor-like, C-terminal domain IC784_11055 PF00440 Bacterial regulatory proteins, tetR family IC784_11085 PF00300 Histidine phosphatase superfamily (branch 1) IC784_11095 PF03061 Thioesterase superfamily IC784_11100 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_11105 PF07848 PaaX-like protein IC784_11105 PF08223 PaaX-like protein C-terminal domain IC784_11110 PF00501 AMP-binding enzyme IC784_11110 PF14535 AMP-binding enzyme C-terminal domain IC784_11115 PF00108 Thiolase, N-terminal domain IC784_11115 PF02803 Thiolase, C-terminal domain IC784_11120 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IC784_11120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC784_11120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC784_11125 PF00378 Enoyl-CoA hydratase/isomerase IC784_11130 PF00378 Enoyl-CoA hydratase/isomerase IC784_11135 PF00175 Oxidoreductase NAD-binding domain IC784_11135 PF00111 2Fe-2S iron-sulfur cluster binding domain IC784_11135 PF00970 Oxidoreductase FAD-binding domain IC784_11140 PF00175 Oxidoreductase NAD-binding domain IC784_11140 PF00111 2Fe-2S iron-sulfur cluster binding domain IC784_11140 PF00970 Oxidoreductase FAD-binding domain IC784_11145 PF01883 Iron-sulfur cluster assembly protein IC784_11150 PF05138 Phenylacetic acid catabolic protein IC784_11155 PF06243 Phenylacetic acid degradation B IC784_11160 PF05138 Phenylacetic acid catabolic protein IC784_11170 PF03313 Serine dehydratase alpha chain IC784_11170 PF03315 Serine dehydratase beta chain IC784_11185 PF00376 MerR family regulatory protein IC784_11185 PF09278 MerR, DNA binding IC784_11195 PF02677 Epoxyqueuosine reductase QueH IC784_11200 PF00392 Bacterial regulatory proteins, gntR family IC784_11200 PF00155 Aminotransferase class I and II IC784_11215 PF07690 Major Facilitator Superfamily IC784_11250 PF06812 ImpA, N-terminal, type VI secretion system IC784_11295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC784_11295 PF00364 Biotin-requiring enzyme IC784_11295 PF00289 Biotin carboxylase, N-terminal domain IC784_11295 PF02785 Biotin carboxylase C-terminal domain IC784_11305 PF07286 Protein of unknown function (DUF1445) IC784_11315 PF01566 Natural resistance-associated macrophage protein IC784_11320 PF03466 LysR substrate binding domain IC784_11320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_11340 PF05114 Protein of unknown function (DUF692) IC784_11370 PF00892 EamA-like transporter family IC784_11385 PF06629 MltA-interacting protein MipA IC784_11390 PF00202 Aminotransferase class-III IC784_11430 PF13737 Transposase DDE domain IC784_11460 PF13276 HTH-like domain IC784_11460 PF00665 Integrase core domain IC784_11460 PF13333 Integrase core domain IC784_11510 PF00440 Bacterial regulatory proteins, tetR family IC784_11510 PF16295 Tetracyclin repressor-like, C-terminal domain IC784_11515 PF00313 'Cold-shock' DNA-binding domain IC784_11520 PF00117 Glutamine amidotransferase class-I IC784_11525 PF01053 Cys/Met metabolism PLP-dependent enzyme IC784_11530 PF01037 Lrp/AsnC ligand binding domain IC784_11530 PF13404 AsnC-type helix-turn-helix domain IC784_11535 PF06865 Pyrimidine/purine nucleoside phosphorylase IC784_11550 PF07690 Major Facilitator Superfamily IC784_11570 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain IC784_11590 PF01654 Cytochrome bd terminal oxidase subunit I IC784_11605 PF02649 Type I GTP cyclohydrolase folE2 IC784_11615 PF01979 Amidohydrolase family IC784_11625 PF03279 Bacterial lipid A biosynthesis acyltransferase IC784_11655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_11655 PF03466 LysR substrate binding domain IC784_11660 PF01624 MutS domain I IC784_11660 PF00488 MutS domain V IC784_11660 PF05188 MutS domain II IC784_11660 PF05190 MutS family domain IV IC784_11660 PF05192 MutS domain III IC784_11670 PF00037 4Fe-4S binding domain IC784_11670 PF11953 Domain of unknown function (DUF3470) IC784_11680 PF01596 O-methyltransferase IC784_11690 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_11700 PF13533 Biotin-lipoyl like IC784_11705 PF03412 Peptidase C39 family IC784_11705 PF00664 ABC transporter transmembrane region IC784_11705 PF00005 ABC transporter IC784_11710 PF02321 Outer membrane efflux protein IC784_11715 PF12399 Branched-chain amino acid ATP-binding cassette transporter IC784_11715 PF00005 ABC transporter IC784_11720 PF03968 OstA-like protein IC784_11740 PF01406 tRNA synthetases class I (C) catalytic domain IC784_11740 PF09190 DALR domain IC784_11765 PF00248 Aldo/keto reductase family IC784_11770 PF01638 HxlR-like helix-turn-helix IC784_11775 PF07690 Major Facilitator Superfamily IC784_11795 PF14748 Pyrroline-5-carboxylate reductase dimerisation IC784_11795 PF03807 NADP oxidoreductase coenzyme F420-dependent IC784_11805 PF00313 'Cold-shock' DNA-binding domain IC784_11810 PF01810 LysE type translocator IC784_11845 PF13742 OB-fold nucleic acid binding domain IC784_11845 PF02601 Exonuclease VII, large subunit IC784_11880 PF00376 MerR family regulatory protein IC784_11880 PF09278 MerR, DNA binding IC784_11895 PF02830 V4R domain IC784_11895 PF00158 Sigma-54 interaction domain IC784_11895 PF02954 Bacterial regulatory protein, Fis family IC784_11895 PF06505 Activator of aromatic catabolism IC784_11905 PF06099 Phenol hydroxylase subunit IC784_11910 PF02332 Methane/Phenol/Toluene Hydroxylase IC784_11915 PF02406 MmoB/DmpM family IC784_11930 PF00970 Oxidoreductase FAD-binding domain IC784_11930 PF00111 2Fe-2S iron-sulfur cluster binding domain IC784_11930 PF00175 Oxidoreductase NAD-binding domain IC784_11940 PF03466 LysR substrate binding domain IC784_11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_11950 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC784_11950 PF00355 Rieske [2Fe-2S] domain IC784_11955 PF00866 Ring hydroxylating beta subunit IC784_11960 PF00111 2Fe-2S iron-sulfur cluster binding domain IC784_11960 PF00175 Oxidoreductase NAD-binding domain IC784_11960 PF00970 Oxidoreductase FAD-binding domain IC784_11965 PF00106 short chain dehydrogenase IC784_11970 PF03594 Benzoate membrane transport protein IC784_11990 PF04408 Helicase associated domain (HA2) IC784_11990 PF00271 Helicase conserved C-terminal domain IC784_11990 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IC784_11990 PF00270 DEAD/DEAH box helicase IC784_11990 PF11898 Domain of unknown function (DUF3418) IC784_11995 PF10417 C-terminal domain of 1-Cys peroxiredoxin IC784_11995 PF00578 AhpC/TSA family IC784_12035 PF02798 Glutathione S-transferase, N-terminal domain IC784_12035 PF00043 Glutathione S-transferase, C-terminal domain IC784_12045 PF02390 Putative methyltransferase IC784_12050 PF00043 Glutathione S-transferase, C-terminal domain IC784_12050 PF13417 Glutathione S-transferase, N-terminal domain IC784_12060 PF00691 OmpA family IC784_12065 PF01979 Amidohydrolase family IC784_12070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IC784_12070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IC784_12080 PF02926 THUMP domain IC784_12080 PF01170 Putative RNA methylase family UPF0020 IC784_12080 PF10672 S-adenosylmethionine-dependent methyltransferase IC784_12095 PF10431 C-terminal, D2-small domain, of ClpB protein IC784_12095 PF17871 AAA lid domain IC784_12095 PF02861 Clp amino terminal domain, pathogenicity island component IC784_12095 PF07724 AAA domain (Cdc48 subfamily) IC784_12095 PF00004 ATPase family associated with various cellular activities (AAA) IC784_12105 PF13737 Transposase DDE domain IC784_12120 PF02566 OsmC-like protein IC784_12125 PF13545 Crp-like helix-turn-helix domain IC784_12125 PF00027 Cyclic nucleotide-binding domain IC784_12130 PF00248 Aldo/keto reductase family IC784_12150 PF13393 Histidyl-tRNA synthetase IC784_12155 PF13737 Transposase DDE domain IC784_12160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IC784_12160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IC784_12170 PF13840 ACT domain IC784_12170 PF01842 ACT domain IC784_12170 PF00696 Amino acid kinase family IC784_12175 PF02599 Global regulator protein family IC784_12180 PF01351 Ribonuclease HII IC784_12190 PF01292 Prokaryotic cytochrome b561 IC784_12195 PF00962 Adenosine/AMP deaminase IC784_12200 PF00860 Permease family IC784_12210 PF00743 Flavin-binding monooxygenase-like IC784_12215 PF00106 short chain dehydrogenase IC784_12225 PF02678 Pirin IC784_12225 PF17954 Quercetinase C-terminal cupin domain IC784_12230 PF17932 Tetracyclin repressor-like, C-terminal domain IC784_12230 PF00440 Bacterial regulatory proteins, tetR family IC784_12240 PF00106 short chain dehydrogenase IC784_12245 PF00743 Flavin-binding monooxygenase-like IC784_12250 PF04072 Leucine carboxyl methyltransferase IC784_12255 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC784_12255 PF12833 Helix-turn-helix domain IC784_12260 PF00743 Flavin-binding monooxygenase-like IC784_12265 PF00106 short chain dehydrogenase IC784_12270 PF07859 alpha/beta hydrolase fold IC784_12280 PF18381 YcaO cyclodehydratase C-terminal domain IC784_12280 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IC784_12285 PF03573 outer membrane porin, OprD family IC784_12295 PF00378 Enoyl-CoA hydratase/isomerase IC784_12300 PF00171 Aldehyde dehydrogenase family IC784_12310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_12310 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_12310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_12315 PF03573 outer membrane porin, OprD family IC784_12335 PF00892 EamA-like transporter family IC784_12345 PF12833 Helix-turn-helix domain IC784_12345 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC784_12350 PF00171 Aldehyde dehydrogenase family IC784_12355 PF00324 Amino acid permease IC784_12360 PF04958 Arginine N-succinyltransferase beta subunit IC784_12365 PF00202 Aminotransferase class-III IC784_12385 PF07729 FCD domain IC784_12385 PF00392 Bacterial regulatory proteins, gntR family IC784_12395 PF00324 Amino acid permease IC784_12400 PF01266 FAD dependent oxidoreductase IC784_12425 PF13737 Transposase DDE domain IC784_12440 PF01925 Sulfite exporter TauE/SafE IC784_12450 PF03180 NLPA lipoprotein IC784_12460 PF01494 FAD binding domain IC784_12480 PF01042 Endoribonuclease L-PSP IC784_12495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC784_12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_12500 PF00764 Arginosuccinate synthase IC784_12505 PF00563 EAL domain IC784_12505 PF00360 Phytochrome region IC784_12505 PF00990 Diguanylate cyclase, GGDEF domain IC784_12505 PF01590 GAF domain IC784_12515 PF00929 Exonuclease IC784_12545 PF00005 ABC transporter IC784_12545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC784_12550 PF12911 N-terminal TM domain of oligopeptide transport permease C IC784_12550 PF00528 Binding-protein-dependent transport system inner membrane component IC784_12555 PF00528 Binding-protein-dependent transport system inner membrane component IC784_12565 PF01464 Transglycosylase SLT domain IC784_12565 PF01476 LysM domain IC784_12565 PF01464 Transglycosylase SLT domain IC784_12565 PF01476 LysM domain IC784_12570 PF00929 Exonuclease IC784_12580 PF09297 NADH pyrophosphatase zinc ribbon domain IC784_12580 PF00293 NUDIX domain IC784_12590 PF04972 BON domain IC784_12595 PF02021 Uncharacterised protein family UPF0102 IC784_12600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IC784_12610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_12610 PF03466 LysR substrate binding domain IC784_12615 PF01810 LysE type translocator IC784_12625 PF13411 MerR HTH family regulatory protein IC784_12635 PF01494 FAD binding domain IC784_12640 PF01494 FAD binding domain IC784_12645 PF05195 Aminopeptidase P, N-terminal domain IC784_12645 PF00557 Metallopeptidase family M24 IC784_12680 PF01812 5-formyltetrahydrofolate cyclo-ligase family IC784_12685 PF00691 OmpA family IC784_12685 PF04355 SmpA / OmlA family IC784_12690 PF03895 YadA-like membrane anchor domain IC784_12690 PF05658 Head domain of trimeric autotransporter adhesin IC784_12690 PF13018 Extended Signal Peptide of Type V secretion system IC784_12690 PF05662 Coiled stalk of trimeric autotransporter adhesin IC784_12700 PF05662 Coiled stalk of trimeric autotransporter adhesin IC784_12700 PF05658 Head domain of trimeric autotransporter adhesin IC784_12700 PF03895 YadA-like membrane anchor domain IC784_12705 PF03895 YadA-like membrane anchor domain IC784_12705 PF05658 Head domain of trimeric autotransporter adhesin IC784_12705 PF05662 Coiled stalk of trimeric autotransporter adhesin IC784_12705 PF13018 Extended Signal Peptide of Type V secretion system IC784_12710 PF13018 Extended Signal Peptide of Type V secretion system IC784_12710 PF03895 YadA-like membrane anchor domain IC784_12710 PF05658 Head domain of trimeric autotransporter adhesin IC784_12710 PF05662 Coiled stalk of trimeric autotransporter adhesin IC784_12710 PF13018 Extended Signal Peptide of Type V secretion system IC784_12710 PF03895 YadA-like membrane anchor domain IC784_12710 PF05658 Head domain of trimeric autotransporter adhesin IC784_12710 PF05662 Coiled stalk of trimeric autotransporter adhesin IC784_12725 PF13737 Transposase DDE domain IC784_12755 PF05362 Lon protease (S16) C-terminal proteolytic domain IC784_12755 PF02190 ATP-dependent protease La (LON) substrate-binding domain IC784_12755 PF00004 ATPase family associated with various cellular activities (AAA) IC784_12760 PF02590 Predicted SPOUT methyltransferase IC784_12765 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IC784_12775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IC784_12775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IC784_12785 PF00730 HhH-GPD superfamily base excision DNA repair protein IC784_12785 PF00633 Helix-hairpin-helix motif IC784_12785 PF10576 Iron-sulfur binding domain of endonuclease III IC784_12795 PF05191 Adenylate kinase, active site lid IC784_12810 PF00905 Penicillin binding protein transpeptidase domain IC784_12810 PF03717 Penicillin-binding Protein dimerisation domain IC784_12830 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC784_12835 PF01730 UreF IC784_12840 PF02814 UreE urease accessory protein, N-terminal domain IC784_12840 PF05194 UreE urease accessory protein, C-terminal domain IC784_12845 PF01979 Amidohydrolase family IC784_12845 PF00449 Urease alpha-subunit, N-terminal domain IC784_12850 PF00699 Urease beta subunit IC784_12860 PF01774 UreD urease accessory protein IC784_12875 PF00463 Isocitrate lyase family IC784_12880 PF03466 LysR substrate binding domain IC784_12880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_12885 PF00571 CBS domain IC784_12885 PF03471 Transporter associated domain IC784_12885 PF01595 Cyclin M transmembrane N-terminal domain IC784_12890 PF03600 Citrate transporter IC784_12910 PF01507 Phosphoadenosine phosphosulfate reductase family IC784_12920 PF14052 Capsule assembly protein Wzi IC784_12925 PF01336 OB-fold nucleic acid binding domain IC784_12925 PF00152 tRNA synthetases class II (D, K and N) IC784_12940 PF00301 Rubredoxin IC784_12950 PF00561 alpha/beta hydrolase fold IC784_12955 PF03466 LysR substrate binding domain IC784_12955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_12965 PF13089 Polyphosphate kinase N-terminal domain IC784_12965 PF17941 Polyphosphate kinase C-terminal domain 1 IC784_12965 PF13090 Polyphosphate kinase C-terminal domain 2 IC784_12965 PF02503 Polyphosphate kinase middle domain IC784_12970 PF00912 Transglycosylase IC784_12975 PF01694 Rhomboid family IC784_12985 PF00005 ABC transporter IC784_12990 PF13472 GDSL-like Lipase/Acylhydrolase family IC784_12995 PF00484 Carbonic anhydrase IC784_13000 PF00561 alpha/beta hydrolase fold IC784_13015 PF01521 Iron-sulphur cluster biosynthesis IC784_13015 PF01106 NifU-like domain IC784_13025 PF00884 Sulfatase IC784_13050 PF01384 Phosphate transporter family IC784_13065 PF13737 Transposase DDE domain IC784_13080 PF01263 Aldose 1-epimerase IC784_13085 PF07690 Major Facilitator Superfamily IC784_13090 PF12833 Helix-turn-helix domain IC784_13090 PF02311 AraC-like ligand binding domain IC784_13100 PF01327 Polypeptide deformylase IC784_13125 PF01958 Domain of unknown function DUF108 IC784_13125 PF03447 Homoserine dehydrogenase, NAD binding domain IC784_13135 PF12697 Alpha/beta hydrolase family IC784_13145 PF07690 Major Facilitator Superfamily IC784_13150 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_13150 PF14759 Reductase C-terminal IC784_13155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC784_13165 PF00355 Rieske [2Fe-2S] domain IC784_13180 PF09339 IclR helix-turn-helix domain IC784_13180 PF01614 Bacterial transcriptional regulator IC784_13195 PF13737 Transposase DDE domain IC784_13215 PF00378 Enoyl-CoA hydratase/isomerase IC784_13235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC784_13240 PF07152 YaeQ protein IC784_13260 PF03061 Thioesterase superfamily IC784_13275 PF02028 BCCT, betaine/carnitine/choline family transporter IC784_13280 PF00440 Bacterial regulatory proteins, tetR family IC784_13280 PF13977 BetI-type transcriptional repressor, C-terminal IC784_13290 PF05199 GMC oxidoreductase IC784_13290 PF00732 GMC oxidoreductase IC784_13295 PF06039 Malate:quinone oxidoreductase (Mqo) IC784_13335 PF01126 Heme oxygenase IC784_13345 PF04575 Protein of unknown function (DUF560) IC784_13365 PF04542 Sigma-70 region 2 IC784_13365 PF08281 Sigma-70, region 4 IC784_13375 PF00701 Dihydrodipicolinate synthetase family IC784_13380 PF07690 Major Facilitator Superfamily IC784_13405 PF13737 Transposase DDE domain IC784_13430 PF07690 Major Facilitator Superfamily IC784_13435 PF13533 Biotin-lipoyl like IC784_13440 PF03061 Thioesterase superfamily IC784_13445 PF00490 Delta-aminolevulinic acid dehydratase IC784_13455 PF01370 NAD dependent epimerase/dehydratase family IC784_13455 PF08338 Domain of unknown function (DUF1731) IC784_13475 PF12320 Type 5 capsule protein repressor C-terminal domain IC784_13475 PF00149 Calcineurin-like phosphoesterase IC784_13485 PF02673 Bacitracin resistance protein BacA IC784_13490 PF01168 Alanine racemase, N-terminal domain IC784_13495 PF00437 Type II/IV secretion system protein IC784_13500 PF00437 Type II/IV secretion system protein IC784_13505 PF01475 Ferric uptake regulator family IC784_13510 PF04355 SmpA / OmlA family IC784_13515 PF03658 RnfH family Ubiquitin IC784_13525 PF01814 Hemerythrin HHE cation binding domain IC784_13530 PF13230 Glutamine amidotransferases class-II IC784_13540 PF00696 Amino acid kinase family IC784_13545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC784_13545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC784_13545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC784_13545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC784_13550 PF00692 dUTPase IC784_13555 PF13361 UvrD-like helicase C-terminal domain IC784_13555 PF00580 UvrD/REP helicase N-terminal domain IC784_13560 PF13488 Glycine zipper IC784_13560 PF00691 OmpA family IC784_13565 PF01553 Acyltransferase IC784_13575 PF03775 Septum formation inhibitor MinC, C-terminal domain IC784_13580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IC784_13585 PF03776 Septum formation topological specificity factor MinE IC784_13595 PF01810 LysE type translocator IC784_13605 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC784_13610 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IC784_13615 PF04377 Arginine-tRNA-protein transferase, C terminus IC784_13615 PF04376 Arginine-tRNA-protein transferase, N terminus IC784_13620 PF00583 Acetyltransferase (GNAT) family IC784_13635 PF00009 Elongation factor Tu GTP binding domain IC784_13635 PF03144 Elongation factor Tu domain 2 IC784_13635 PF03143 Elongation factor Tu C-terminal domain IC784_13640 PF00009 Elongation factor Tu GTP binding domain IC784_13640 PF03144 Elongation factor Tu domain 2 IC784_13640 PF03764 Elongation factor G, domain IV IC784_13640 PF14492 Elongation Factor G, domain II IC784_13640 PF00679 Elongation factor G C-terminus IC784_13645 PF00177 Ribosomal protein S7p/S5e IC784_13650 PF00164 Ribosomal protein S12/S23 IC784_13660 PF00109 Beta-ketoacyl synthase, N-terminal domain IC784_13660 PF02801 Beta-ketoacyl synthase, C-terminal domain IC784_13665 PF03653 Uncharacterised protein family (UPF0093) IC784_13675 PF02540 NAD synthase IC784_13675 PF00795 Carbon-nitrogen hydrolase IC784_13710 PF00037 4Fe-4S binding domain IC784_13715 PF01467 Cytidylyltransferase-like IC784_13725 PF03358 NADPH-dependent FMN reductase IC784_13730 PF02578 Multi-copper polyphenol oxidoreductase laccase IC784_13740 PF13525 Outer membrane lipoprotein IC784_13745 PF08278 DNA primase DnaG DnaB-binding IC784_13745 PF10410 DnaB-helicase binding domain of primase IC784_13745 PF01807 CHC2 zinc finger IC784_13745 PF08275 DNA primase catalytic core, N-terminal domain IC784_13765 PF08544 GHMP kinases C terminal IC784_13765 PF00288 GHMP kinases N terminal domain IC784_13790 PF14572 Phosphoribosyl synthetase-associated domain IC784_13790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IC784_13795 PF01386 Ribosomal L25p family IC784_13800 PF01195 Peptidyl-tRNA hydrolase IC784_13805 PF02261 Aspartate decarboxylase IC784_13820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IC784_13830 PF02581 Thiamine monophosphate synthase IC784_13830 PF03070 TENA/THI-4/PQQC family IC784_13830 PF08543 Phosphomethylpyrimidine kinase IC784_13835 PF01476 LysM domain IC784_13835 PF04972 BON domain IC784_13840 PF00550 Phosphopantetheine attachment site IC784_13850 PF00698 Acyl transferase domain IC784_13855 PF01783 Ribosomal L32p protein family IC784_13860 PF02620 Large ribosomal RNA subunit accumulation protein YceD IC784_13865 PF04315 Elongation factor P hydroxylase IC784_13875 PF02616 Segregation and condensation protein ScpA IC784_13880 PF04079 Segregation and condensation complex subunit ScpB IC784_13885 PF01479 S4 domain IC784_13885 PF00849 RNA pseudouridylate synthase IC784_13900 PF00155 Aminotransferase class I and II IC784_13910 PF08241 Methyltransferase domain IC784_13910 PF12697 Alpha/beta hydrolase family IC784_13915 PF02358 Trehalose-phosphatase IC784_13920 PF00982 Glycosyltransferase family 20 IC784_13930 PF00210 Ferritin-like domain IC784_13935 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IC784_13935 PF00533 BRCA1 C Terminus (BRCT) domain IC784_13935 PF12826 Helix-hairpin-helix motif IC784_13935 PF01653 NAD-dependent DNA ligase adenylation domain IC784_13935 PF03120 NAD-dependent DNA ligase OB-fold domain IC784_13955 PF01925 Sulfite exporter TauE/SafE IC784_13965 PF03309 Type III pantothenate kinase IC784_13970 PF02978 Signal peptide binding domain IC784_13970 PF00448 SRP54-type protein, GTPase domain IC784_13970 PF02881 SRP54-type protein, helical bundle domain IC784_13980 PF01207 Dihydrouridine synthase (Dus) IC784_14010 PF00692 dUTPase IC784_14025 PF01048 Phosphorylase superfamily IC784_14030 PF10609 NUBPL iron-transfer P-loop NTPase IC784_14070 PF13533 Biotin-lipoyl like IC784_14075 PF00291 Pyridoxal-phosphate dependent enzyme IC784_14090 PF05552 Conserved TM helix IC784_14105 PF00970 Oxidoreductase FAD-binding domain IC784_14105 PF00175 Oxidoreductase NAD-binding domain IC784_14110 PF03466 LysR substrate binding domain IC784_14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_14120 PF00313 'Cold-shock' DNA-binding domain IC784_14130 PF00361 Proton-conducting membrane transporter IC784_14135 PF00361 Proton-conducting membrane transporter IC784_14145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IC784_14150 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IC784_14155 PF12838 4Fe-4S dicluster domain IC784_14160 PF00146 NADH dehydrogenase IC784_14165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IC784_14165 PF00384 Molybdopterin oxidoreductase IC784_14165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IC784_14170 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IC784_14170 PF10531 SLBB domain IC784_14170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IC784_14185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IC784_14190 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IC784_14195 PF00990 Diguanylate cyclase, GGDEF domain IC784_14195 PF17158 Membrane-associated sensor, integral membrane domain IC784_14205 PF00672 HAMP domain IC784_14205 PF00512 His Kinase A (phospho-acceptor) domain IC784_14205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_14210 PF00072 Response regulator receiver domain IC784_14210 PF00486 Transcriptional regulatory protein, C terminal IC784_14220 PF02867 Ribonucleotide reductase, barrel domain IC784_14220 PF03477 ATP cone domain IC784_14220 PF00317 Ribonucleotide reductase, all-alpha domain IC784_14230 PF00268 Ribonucleotide reductase, small chain IC784_14260 PF03969 AFG1-like ATPase IC784_14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_14265 PF03466 LysR substrate binding domain IC784_14270 PF13737 Transposase DDE domain IC784_14285 PF08267 Cobalamin-independent synthase, N-terminal domain IC784_14285 PF01717 Cobalamin-independent synthase, Catalytic domain IC784_14300 PF01810 LysE type translocator IC784_14320 PF07690 Major Facilitator Superfamily IC784_14330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_14330 PF03466 LysR substrate binding domain IC784_14335 PF00890 FAD binding domain IC784_14335 PF14537 Cytochrome c3 IC784_14350 PF17932 Tetracyclin repressor-like, C-terminal domain IC784_14350 PF00440 Bacterial regulatory proteins, tetR family IC784_14360 PF02515 CoA-transferase family III IC784_14370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_14370 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_14370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_14375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_14375 PF03466 LysR substrate binding domain IC784_14380 PF00107 Zinc-binding dehydrogenase IC784_14380 PF08240 Alcohol dehydrogenase GroES-like domain IC784_14410 PF02445 Quinolinate synthetase A protein IC784_14420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IC784_14420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IC784_14425 PF00893 Small Multidrug Resistance protein IC784_14455 PF00834 Ribulose-phosphate 3 epimerase family IC784_14465 PF00756 Putative esterase IC784_14475 PF04445 Putative SAM-dependent methyltransferase IC784_14480 PF00814 Glycoprotease family IC784_14485 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_14490 PF00293 NUDIX domain IC784_14530 PF04715 Anthranilate synthase component I, N terminal region IC784_14530 PF00425 chorismate binding enzyme IC784_14535 PF00155 Aminotransferase class I and II IC784_14540 PF00815 Histidinol dehydrogenase IC784_14545 PF01634 ATP phosphoribosyltransferase IC784_14550 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IC784_14555 PF01722 BolA-like protein IC784_14560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IC784_14565 PF04552 Sigma-54, DNA binding domain IC784_14565 PF04963 Sigma-54 factor, core binding domain IC784_14565 PF00309 Sigma-54 factor, Activator interacting domain (AID) IC784_14610 PF00795 Carbon-nitrogen hydrolase IC784_14620 PF01047 MarR family IC784_14625 PF02566 OsmC-like protein IC784_14630 PF00437 Type II/IV secretion system protein IC784_14650 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IC784_14650 PF01612 3'-5' exonuclease IC784_14650 PF01367 5'-3' exonuclease, C-terminal SAM fold IC784_14650 PF00476 DNA polymerase family A IC784_14655 PF02325 YGGT family IC784_14660 PF14748 Pyrroline-5-carboxylate reductase dimerisation IC784_14660 PF03807 NADP oxidoreductase coenzyme F420-dependent IC784_14670 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IC784_14675 PF02541 Ppx/GppA phosphatase family IC784_14680 PF00085 Thioredoxin IC784_14685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC784_14685 PF07498 Rho termination factor, N-terminal domain IC784_14685 PF07497 Rho termination factor, RNA-binding domain IC784_14700 PF00216 Bacterial DNA-binding protein IC784_14705 PF03147 Ferredoxin-fold anticodon binding domain IC784_14705 PF03484 tRNA synthetase B5 domain IC784_14705 PF03483 B3/4 domain IC784_14705 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IC784_14705 PF01588 Putative tRNA binding domain IC784_14710 PF01409 tRNA synthetases class II core domain (F) IC784_14710 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IC784_14730 PF00453 Ribosomal protein L20 IC784_14735 PF01632 Ribosomal protein L35 IC784_14740 PF07690 Major Facilitator Superfamily IC784_14745 PF09335 SNARE associated Golgi protein IC784_14750 PF02798 Glutathione S-transferase, N-terminal domain IC784_14750 PF00043 Glutathione S-transferase, C-terminal domain IC784_14755 PF00707 Translation initiation factor IF-3, C-terminal domain IC784_14755 PF05198 Translation initiation factor IF-3, N-terminal domain IC784_14760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IC784_14760 PF02824 TGS domain IC784_14760 PF03129 Anticodon binding domain IC784_14760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC784_14765 PF00501 AMP-binding enzyme IC784_14765 PF13193 AMP-binding enzyme C-terminal domain IC784_14770 PF04751 Protein of unknown function (DUF615) IC784_14775 PF00381 PTS HPr component phosphorylation site IC784_14780 PF03668 P-loop ATPase protein family IC784_14785 PF02569 Pantoate-beta-alanine ligase IC784_14790 PF02548 Ketopantoate hydroxymethyltransferase IC784_14810 PF03819 MazG nucleotide pyrophosphohydrolase domain IC784_14820 PF04607 Region found in RelA / SpoT proteins IC784_14820 PF02824 TGS domain IC784_14820 PF13291 ACT domain IC784_14825 PF05958 tRNA (Uracil-5-)-methyltransferase IC784_14835 PF00291 Pyridoxal-phosphate dependent enzyme IC784_14840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IC784_14840 PF00512 His Kinase A (phospho-acceptor) domain IC784_14840 PF01627 Hpt domain IC784_14840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_14840 PF00672 HAMP domain IC784_14840 PF00072 Response regulator receiver domain IC784_14845 PF00378 Enoyl-CoA hydratase/isomerase IC784_14850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IC784_14850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IC784_14855 PF01261 Xylose isomerase-like TIM barrel IC784_14865 PF00106 short chain dehydrogenase IC784_14870 PF02233 NAD(P) transhydrogenase beta subunit IC784_14875 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IC784_14880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IC784_14880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IC784_14885 PF00892 EamA-like transporter family IC784_14900 PF01207 Dihydrouridine synthase (Dus) IC784_14910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_14910 PF03466 LysR substrate binding domain IC784_14920 PF00899 ThiF family IC784_14930 PF00330 Aconitase family (aconitate hydratase) IC784_14930 PF00694 Aconitase C-terminal domain IC784_14935 PF01026 TatD related DNase IC784_14950 PF00009 Elongation factor Tu GTP binding domain IC784_14950 PF03144 Elongation factor Tu domain 2 IC784_14950 PF16658 Class II release factor RF3, C-terminal domain IC784_14965 PF01555 DNA methylase IC784_14990 PF13195 Protein of unknown function (DUF4011) IC784_14990 PF13086 AAA domain IC784_14990 PF13087 AAA domain IC784_15080 PF03707 Bacterial signalling protein N terminal repeat IC784_15080 PF00990 Diguanylate cyclase, GGDEF domain IC784_15080 PF00563 EAL domain IC784_15085 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IC784_15085 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IC784_15090 PF10369 Small subunit of acetolactate synthase IC784_15095 PF00205 Thiamine pyrophosphate enzyme, central domain IC784_15095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC784_15095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC784_15105 PF09334 tRNA synthetases class I (M) IC784_15105 PF00133 tRNA synthetases class I (I, L, M and V) IC784_15105 PF08264 Anticodon-binding domain of tRNA IC784_15105 PF13603 Leucyl-tRNA synthetase, Domain 2 IC784_15120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC784_15125 PF00005 ABC transporter IC784_15125 PF12704 MacB-like periplasmic core domain IC784_15125 PF02687 FtsX-like permease family IC784_15130 PF02321 Outer membrane efflux protein IC784_15145 PF00929 Exonuclease IC784_15150 PF03193 RsgA GTPase IC784_15160 PF00462 Glutaredoxin IC784_15165 PF02556 Preprotein translocase subunit SecB IC784_15180 PF02801 Beta-ketoacyl synthase, C-terminal domain IC784_15180 PF00109 Beta-ketoacyl synthase, N-terminal domain IC784_15195 PF02801 Beta-ketoacyl synthase, C-terminal domain IC784_15195 PF00109 Beta-ketoacyl synthase, N-terminal domain IC784_15205 PF04820 Tryptophan halogenase IC784_15225 PF00221 Aromatic amino acid lyase IC784_15235 PF00535 Glycosyl transferase family 2 IC784_15250 PF00550 Phosphopantetheine attachment site IC784_15255 PF00550 Phosphopantetheine attachment site IC784_15270 PF01926 50S ribosome-binding GTPase IC784_15270 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IC784_15295 PF13464 Domain of unknown function (DUF4115) IC784_15305 PF04055 Radical SAM superfamily IC784_15310 PF00334 Nucleoside diphosphate kinase IC784_15315 PF04384 Iron-sulphur cluster assembly IC784_15320 PF01569 PAP2 superfamily IC784_15325 PF00534 Glycosyl transferases group 1 IC784_15325 PF13439 Glycosyltransferase Family 4 IC784_15330 PF00595 PDZ domain IC784_15330 PF03572 Peptidase family S41 IC784_15330 PF17804 Tail specific protease N-terminal domain IC784_15330 PF11818 C-terminal domain of tail specific protease (DUF3340) IC784_15335 PF00933 Glycosyl hydrolase family 3 N terminal domain IC784_15350 PF00171 Aldehyde dehydrogenase family IC784_15355 PF00171 Aldehyde dehydrogenase family IC784_15360 PF01202 Shikimate kinase IC784_15365 PF02447 GntP family permease IC784_15405 PF07724 AAA domain (Cdc48 subfamily) IC784_15405 PF10431 C-terminal, D2-small domain, of ClpB protein IC784_15405 PF06689 ClpX C4-type zinc finger IC784_15410 PF00574 Clp protease IC784_15415 PF05697 Bacterial trigger factor protein (TF) IC784_15415 PF05698 Bacterial trigger factor protein (TF) C-terminus IC784_15415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC784_15420 PF07715 TonB-dependent Receptor Plug Domain IC784_15420 PF00593 TonB dependent receptor IC784_15430 PF00682 HMGL-like IC784_15430 PF08502 LeuA allosteric (dimerisation) domain IC784_15435 PF00561 alpha/beta hydrolase fold IC784_15440 PF00561 alpha/beta hydrolase fold IC784_15440 PF07021 Methionine biosynthesis protein MetW IC784_15450 PF01725 Ham1 family IC784_15460 PF02416 mttA/Hcf106 family IC784_15465 PF02416 mttA/Hcf106 family IC784_15485 PF01790 Prolipoprotein diacylglyceryl transferase IC784_15505 PF00186 Dihydrofolate reductase IC784_15515 PF01625 Peptide methionine sulfoxide reductase IC784_15520 PF02472 Biopolymer transport protein ExbD/TolR IC784_15525 PF01618 MotA/TolQ/ExbB proton channel family IC784_15535 PF01842 ACT domain IC784_15535 PF00551 Formyl transferase IC784_15545 PF00171 Aldehyde dehydrogenase family IC784_15550 PF00830 Ribosomal L28 family IC784_15555 PF00471 Ribosomal protein L33 IC784_15560 PF00999 Sodium/hydrogen exchanger family IC784_15560 PF02254 TrkA-N domain IC784_15580 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IC784_15585 PF00580 UvrD/REP helicase N-terminal domain IC784_15585 PF13361 UvrD-like helicase C-terminal domain IC784_15605 PF08272 Topoisomerase I zinc-ribbon-like IC784_15605 PF01396 Topoisomerase DNA binding C4 zinc finger IC784_15605 PF01131 DNA topoisomerase IC784_15605 PF01751 Toprim domain IC784_15615 PF01638 HxlR-like helix-turn-helix IC784_15620 PF08240 Alcohol dehydrogenase GroES-like domain IC784_15620 PF00107 Zinc-binding dehydrogenase IC784_15625 PF04102 SlyX IC784_15630 PF00005 ABC transporter IC784_15630 PF12848 ABC transporter IC784_15630 PF16326 ABC transporter C-terminal domain IC784_15640 PF01810 LysE type translocator IC784_15645 PF03279 Bacterial lipid A biosynthesis acyltransferase IC784_15655 PF00375 Sodium:dicarboxylate symporter family IC784_15665 PF01118 Semialdehyde dehydrogenase, NAD binding domain IC784_15665 PF02774 Semialdehyde dehydrogenase, dimerisation domain IC784_15685 PF01416 tRNA pseudouridine synthase IC784_15695 PF01176 Translation initiation factor 1A / IF-1 IC784_15710 PF00180 Isocitrate/isopropylmalate dehydrogenase IC784_15720 PF00694 Aconitase C-terminal domain IC784_15725 PF00330 Aconitase family (aconitate hydratase) IC784_15735 PF03466 LysR substrate binding domain IC784_15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_15760 PF00293 NUDIX domain IC784_15765 PF05524 PEP-utilising enzyme, N-terminal IC784_15765 PF00391 PEP-utilising enzyme, mobile domain IC784_15765 PF02896 PEP-utilising enzyme, TIM barrel domain IC784_15765 PF01590 GAF domain IC784_15770 PF00141 Peroxidase IC784_15775 PF12706 Beta-lactamase superfamily domain IC784_15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_15780 PF03466 LysR substrate binding domain IC784_15790 PF02798 Glutathione S-transferase, N-terminal domain IC784_15795 PF08279 HTH domain IC784_15795 PF13280 WYL domain IC784_15805 PF01479 S4 domain IC784_15805 PF00849 RNA pseudouridylate synthase IC784_15810 PF10150 Ribonuclease E/G family IC784_15810 PF00575 S1 RNA binding domain IC784_15810 PF12111 Polyribonucleotide phosphorylase C terminal IC784_15830 PF03466 LysR substrate binding domain IC784_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_15835 PF00106 short chain dehydrogenase IC784_15855 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_15855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_15855 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC784_15860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_15860 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC784_15865 PF03109 ABC1 family IC784_15870 PF01197 Ribosomal protein L31 IC784_15880 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IC784_15900 PF03884 DNA gyrase inhibitor YacG IC784_15905 PF00753 Metallo-beta-lactamase superfamily IC784_15910 PF00762 Ferrochelatase IC784_15940 PF01206 Sulfurtransferase TusA IC784_15945 PF00571 CBS domain IC784_15945 PF03471 Transporter associated domain IC784_15950 PF00795 Carbon-nitrogen hydrolase IC784_15955 PF01588 Putative tRNA binding domain IC784_15970 PF08334 Type II secretion system (T2SS), protein G IC784_15970 PF07963 Prokaryotic N-terminal methylation motif IC784_15975 PF00482 Type II secretion system (T2SS), protein F IC784_15980 PF17764 3′ DNA-binding domain (3′BD) IC784_15980 PF00270 DEAD/DEAH box helicase IC784_15980 PF00271 Helicase conserved C-terminal domain IC784_15980 PF18074 Primosomal protein N C-terminal domain IC784_15980 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IC784_15990 PF01430 Hsp33 protein IC784_16010 PF01544 CorA-like Mg2+ transporter protein IC784_16015 PF00575 S1 RNA binding domain IC784_16015 PF03725 3' exoribonuclease family, domain 2 IC784_16015 PF00013 KH domain IC784_16015 PF01138 3' exoribonuclease family, domain 1 IC784_16015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IC784_16020 PF00312 Ribosomal protein S15 IC784_16025 PF00144 Beta-lactamase IC784_16030 PF13538 UvrD-like helicase C-terminal domain IC784_16035 PF12705 PD-(D/E)XK nuclease superfamily IC784_16035 PF13361 UvrD-like helicase C-terminal domain IC784_16035 PF00580 UvrD/REP helicase N-terminal domain IC784_16040 PF17946 RecC C-terminal domain IC784_16055 PF03976 Polyphosphate kinase 2 (PPK2) IC784_16075 PF03109 ABC1 family IC784_16085 PF01502 Phosphoribosyl-AMP cyclohydrolase IC784_16100 PF00361 Proton-conducting membrane transporter IC784_16100 PF13244 Domain of unknown function (DUF4040) IC784_16100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IC784_16100 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IC784_16105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IC784_16115 PF01899 Na+/H+ ion antiporter subunit IC784_16120 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IC784_16125 PF03334 Na+/H+ antiporter subunit IC784_16130 PF02033 Ribosome-binding factor A IC784_16135 PF08364 Bacterial translation initiation factor IF-2 associated region IC784_16135 PF11987 Translation-initiation factor 2 IC784_16135 PF00009 Elongation factor Tu GTP binding domain IC784_16135 PF04760 Translation initiation factor IF-2, N-terminal region IC784_16140 PF13184 NusA-like KH domain IC784_16140 PF00575 S1 RNA binding domain IC784_16140 PF08529 NusA N-terminal domain IC784_16145 PF02576 RimP N-terminal domain IC784_16145 PF17384 RimP C-terminal SH3 domain IC784_16165 PF03840 Preprotein translocase SecG subunit IC784_16170 PF00121 Triosephosphate isomerase IC784_16175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IC784_16175 PF00437 Type II/IV secretion system protein IC784_16180 PF00482 Type II secretion system (T2SS), protein F IC784_16185 PF01478 Type IV leader peptidase family IC784_16185 PF06750 Bacterial Peptidase A24 N-terminal domain IC784_16190 PF01121 Dephospho-CoA kinase IC784_16200 PF08032 RNA 2'-O ribose methyltransferase substrate binding IC784_16200 PF00588 SpoU rRNA Methylase family IC784_16205 PF06865 Pyrimidine/purine nucleoside phosphorylase IC784_16215 PF02463 RecF/RecN/SMC N terminal domain IC784_16220 PF02622 Uncharacterized ACR, COG1678 IC784_16225 PF03652 Holliday junction resolvase IC784_16230 PF13533 Biotin-lipoyl like IC784_16240 PF04632 Fusaric acid resistance protein family IC784_16265 PF08459 UvrC Helix-hairpin-helix N-terminal IC784_16265 PF02151 UvrB/uvrC motif IC784_16265 PF01541 GIY-YIG catalytic domain IC784_16285 PF00378 Enoyl-CoA hydratase/isomerase IC784_16285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC784_16285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC784_16305 PF09278 MerR, DNA binding IC784_16305 PF00376 MerR family regulatory protein IC784_16315 PF01323 DSBA-like thioredoxin domain IC784_16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_16330 PF00183 Hsp90 protein IC784_16345 PF13726 Na+-H+ antiporter family IC784_16345 PF03553 Na+/H+ antiporter family IC784_16350 PF00561 alpha/beta hydrolase fold IC784_16370 PF04997 RNA polymerase Rpb1, domain 1 IC784_16370 PF00623 RNA polymerase Rpb1, domain 2 IC784_16370 PF04983 RNA polymerase Rpb1, domain 3 IC784_16370 PF05000 RNA polymerase Rpb1, domain 4 IC784_16370 PF04998 RNA polymerase Rpb1, domain 5 IC784_16375 PF04563 RNA polymerase beta subunit IC784_16375 PF04561 RNA polymerase Rpb2, domain 2 IC784_16375 PF04565 RNA polymerase Rpb2, domain 3 IC784_16375 PF10385 RNA polymerase beta subunit external 1 domain IC784_16375 PF00562 RNA polymerase Rpb2, domain 6 IC784_16375 PF04560 RNA polymerase Rpb2, domain 7 IC784_16380 PF16320 Ribosomal protein L7/L12 dimerisation domain IC784_16380 PF00542 Ribosomal protein L7/L12 C-terminal domain IC784_16385 PF00466 Ribosomal protein L10 IC784_16390 PF00687 Ribosomal protein L1p/L10e family IC784_16395 PF03946 Ribosomal protein L11, N-terminal domain IC784_16395 PF00298 Ribosomal protein L11, RNA binding domain IC784_16400 PF02357 Transcription termination factor nusG IC784_16400 PF00467 KOW motif IC784_16405 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IC784_16415 PF00009 Elongation factor Tu GTP binding domain IC784_16415 PF03143 Elongation factor Tu C-terminal domain IC784_16415 PF03144 Elongation factor Tu domain 2 IC784_16440 PF00425 chorismate binding enzyme IC784_16440 PF04715 Anthranilate synthase component I, N terminal region IC784_16445 PF13419 Haloacid dehalogenase-like hydrolase IC784_16450 PF12401 Protein of unknown function (DUF2662) IC784_16450 PF00498 FHA domain IC784_16455 PF00263 Bacterial type II and III secretion system protein IC784_16455 PF03958 Bacterial type II/III secretion system short domain IC784_16470 PF00816 H-NS histone family IC784_16495 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IC784_16495 PF03900 Porphobilinogen deaminase, C-terminal domain IC784_16500 PF04397 LytTr DNA-binding domain IC784_16500 PF00072 Response regulator receiver domain IC784_16505 PF07694 5TMR of 5TMR-LYT IC784_16505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_16505 PF06580 Histidine kinase IC784_16510 PF00206 Lyase IC784_16510 PF14698 Argininosuccinate lyase C-terminal IC784_16515 PF04362 Bacterial Fe(2+) trafficking IC784_16520 PF01895 PhoU domain IC784_16525 PF02321 Outer membrane efflux protein IC784_16530 PF00892 EamA-like transporter family IC784_16545 PF13667 ThiC-associated domain IC784_16545 PF01964 Radical SAM ThiC family IC784_16550 PF00293 NUDIX domain IC784_16555 PF00149 Calcineurin-like phosphoesterase IC784_16560 PF01258 Prokaryotic dksA/traR C4-type zinc finger IC784_16570 PF01098 Cell cycle protein IC784_16575 PF08245 Mur ligase middle domain IC784_16575 PF02875 Mur ligase family, glutamate ligase domain IC784_16595 PF00589 Phage integrase family IC784_16595 PF02899 Phage integrase, N-terminal SAM-like domain IC784_16600 PF13098 Thioredoxin-like domain IC784_16600 PF10411 Disulfide bond isomerase protein N-terminus IC784_16610 PF00291 Pyridoxal-phosphate dependent enzyme IC784_16615 PF00768 D-alanyl-D-alanine carboxypeptidase IC784_16620 PF00196 Bacterial regulatory proteins, luxR family IC784_16620 PF00072 Response regulator receiver domain IC784_16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_16625 PF00512 His Kinase A (phospho-acceptor) domain IC784_16630 PF00072 Response regulator receiver domain IC784_16630 PF00158 Sigma-54 interaction domain IC784_16630 PF02954 Bacterial regulatory protein, Fis family IC784_16635 PF03572 Peptidase family S41 IC784_16635 PF00595 PDZ domain IC784_16640 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IC784_16640 PF01676 Metalloenzyme superfamily IC784_16645 PF03739 Lipopolysaccharide export system permease LptF/LptG IC784_16650 PF03739 Lipopolysaccharide export system permease LptF/LptG IC784_16655 PF02789 Cytosol aminopeptidase family, N-terminal domain IC784_16655 PF00883 Cytosol aminopeptidase family, catalytic domain IC784_16685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IC784_16685 PF01872 RibD C-terminal domain IC784_16690 PF03477 ATP cone domain IC784_16695 PF00909 Ammonium Transporter Family IC784_16700 PF00543 Nitrogen regulatory protein P-II IC784_16710 PF01078 Magnesium chelatase, subunit ChlI IC784_16710 PF13335 Magnesium chelatase, subunit ChlI C-terminal IC784_16735 PF03573 outer membrane porin, OprD family IC784_16740 PF00719 Inorganic pyrophosphatase IC784_16760 PF00521 DNA gyrase/topoisomerase IV, subunit A IC784_16760 PF03989 DNA gyrase C-terminal domain, beta-propeller IC784_16765 PF07690 Major Facilitator Superfamily IC784_16770 PF03458 UPF0126 domain IC784_16775 PF02810 SEC-C motif IC784_16780 PF03741 Integral membrane protein TerC family IC784_16780 PF03471 Transporter associated domain IC784_16785 PF03641 Possible lysine decarboxylase IC784_16800 PF11798 IMS family HHH motif IC784_16800 PF11799 impB/mucB/samB family C-terminal domain IC784_16800 PF00817 impB/mucB/samB family IC784_16805 PF00072 Response regulator receiver domain IC784_16805 PF00486 Transcriptional regulatory protein, C terminal IC784_16810 PF00512 His Kinase A (phospho-acceptor) domain IC784_16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC784_16810 PF00672 HAMP domain IC784_16815 PF06123 Inner membrane protein CreD IC784_16835 PF08497 Radical SAM N-terminal IC784_16835 PF11842 Domain of unknown function (DUF3362) IC784_16835 PF04055 Radical SAM superfamily IC784_16855 PF03358 NADPH-dependent FMN reductase IC784_16905 PF00440 Bacterial regulatory proteins, tetR family IC784_16930 PF01327 Polypeptide deformylase IC784_16940 PF17782 DprA winged helix domain IC784_16940 PF02481 DNA recombination-mediator protein A IC784_16950 PF00892 EamA-like transporter family IC784_16955 PF00440 Bacterial regulatory proteins, tetR family IC784_16960 PF07690 Major Facilitator Superfamily IC784_16970 PF00255 Glutathione peroxidase IC784_16980 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IC784_16985 PF02874 ATP synthase alpha/beta family, beta-barrel domain IC784_16985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC784_16990 PF00231 ATP synthase IC784_16995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC784_16995 PF02874 ATP synthase alpha/beta family, beta-barrel domain IC784_16995 PF00306 ATP synthase alpha/beta chain, C terminal domain IC784_17000 PF00213 ATP synthase delta (OSCP) subunit IC784_17005 PF00430 ATP synthase B/B' CF(0) IC784_17010 PF00137 ATP synthase subunit C IC784_17015 PF00119 ATP synthase A chain IC784_17035 PF00005 ABC transporter IC784_17040 PF00950 ABC 3 transport family IC784_17045 PF01810 LysE type translocator IC784_17050 PF04261 Dyp-type peroxidase family IC784_17060 PF00390 Malic enzyme, N-terminal domain IC784_17060 PF03949 Malic enzyme, NAD binding domain IC784_17065 PF03485 Arginyl tRNA synthetase N terminal domain IC784_17065 PF00750 tRNA synthetases class I (R) IC784_17065 PF05746 DALR anticodon binding domain IC784_17095 PF01475 Ferric uptake regulator family IC784_17100 PF03551 Transcriptional regulator PadR-like family IC784_17105 PF13302 Acetyltransferase (GNAT) domain IC784_17110 PF00958 GMP synthase C terminal domain IC784_17110 PF02540 NAD synthase IC784_17110 PF00117 Glutamine amidotransferase class-I IC784_17120 PF07681 DoxX IC784_17125 PF09335 SNARE associated Golgi protein IC784_17140 PF13614 AAA domain IC784_17150 PF01722 BolA-like protein IC784_17165 PF01648 4'-phosphopantetheinyl transferase superfamily IC784_17170 PF16363 GDP-mannose 4,6 dehydratase IC784_17185 PF00975 Thioesterase domain IC784_17185 PF00550 Phosphopantetheine attachment site IC784_17185 PF13193 AMP-binding enzyme C-terminal domain IC784_17185 PF00668 Condensation domain IC784_17185 PF00501 AMP-binding enzyme IC784_17190 PF16197 Ketoacyl-synthetase C-terminal extension IC784_17190 PF00109 Beta-ketoacyl synthase, N-terminal domain IC784_17190 PF02801 Beta-ketoacyl synthase, C-terminal domain IC784_17190 PF08242 Methyltransferase domain IC784_17190 PF14765 Polyketide synthase dehydratase IC784_17190 PF00975 Thioesterase domain IC784_17190 PF00550 Phosphopantetheine attachment site IC784_17200 PF00501 AMP-binding enzyme IC784_17205 PF03472 Autoinducer binding domain IC784_17205 PF00196 Bacterial regulatory proteins, luxR family IC784_17210 PF13737 Transposase DDE domain IC784_17220 PF00765 Autoinducer synthase IC784_17225 PF07690 Major Facilitator Superfamily IC784_17225 PF00083 Sugar (and other) transporter IC784_17230 PF00378 Enoyl-CoA hydratase/isomerase IC784_17235 PF00378 Enoyl-CoA hydratase/isomerase IC784_17240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC784_17240 PF02770 Acyl-CoA dehydrogenase, middle domain IC784_17240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC784_17255 PF00171 Aldehyde dehydrogenase family IC784_17265 PF00324 Amino acid permease IC784_17270 PF00324 Amino acid permease IC784_17275 PF01042 Endoribonuclease L-PSP IC784_17280 PF01168 Alanine racemase, N-terminal domain IC784_17280 PF00842 Alanine racemase, C-terminal domain IC784_17285 PF01266 FAD dependent oxidoreductase IC784_17290 PF01037 Lrp/AsnC ligand binding domain IC784_17315 PF00849 RNA pseudouridylate synthase IC784_17335 PF00440 Bacterial regulatory proteins, tetR family IC784_17335 PF08361 MAATS-type transcriptional repressor, C-terminal region IC784_17350 PF13737 Transposase DDE domain IC784_17360 PF00293 NUDIX domain IC784_17380 PF13737 Transposase DDE domain IC784_17390 PF00694 Aconitase C-terminal domain IC784_17390 PF00330 Aconitase family (aconitate hydratase) IC784_17395 PF00285 Citrate synthase, C-terminal domain IC784_17405 PF07729 FCD domain IC784_17405 PF00392 Bacterial regulatory proteins, gntR family IC784_17430 PF07729 FCD domain IC784_17430 PF00392 Bacterial regulatory proteins, gntR family IC784_17440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC784_17440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC784_17440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC784_17440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC784_17450 PF13737 Transposase DDE domain IC784_17455 PF16363 GDP-mannose 4,6 dehydratase IC784_17460 PF00342 Phosphoglucose isomerase IC784_17465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IC784_17465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IC784_17465 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IC784_17475 PF02397 Bacterial sugar transferase IC784_17485 PF01370 NAD dependent epimerase/dehydratase family IC784_17490 PF00132 Bacterial transferase hexapeptide (six repeats) IC784_17495 PF00535 Glycosyl transferase family 2 IC784_17500 PF00534 Glycosyl transferases group 1 IC784_17500 PF13439 Glycosyltransferase Family 4 IC784_17515 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IC784_17520 PF00483 Nucleotidyl transferase IC784_17525 PF04321 RmlD substrate binding domain IC784_17530 PF16363 GDP-mannose 4,6 dehydratase IC784_17535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IC784_17535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IC784_17535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IC784_17540 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IC784_17540 PF10531 SLBB domain IC784_17540 PF02563 Polysaccharide biosynthesis/export protein IC784_17545 PF01451 Low molecular weight phosphotyrosine protein phosphatase IC784_17550 PF13614 AAA domain IC784_17550 PF13807 G-rich domain on putative tyrosine kinase IC784_17550 PF02706 Chain length determinant protein IC784_17555 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IC784_17555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC784_17565 PF03023 Lipid II flippase MurJ IC784_17570 PF01510 N-acetylmuramoyl-L-alanine amidase IC784_17575 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IC784_17575 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IC784_17585 PF04185 Phosphoesterase family IC784_17585 PF05506 Domain of unknown function (DUF756) IC784_17595 PF01138 3' exoribonuclease family, domain 1 IC784_17595 PF03725 3' exoribonuclease family, domain 2 IC784_17600 PF00487 Fatty acid desaturase IC784_17605 PF00175 Oxidoreductase NAD-binding domain IC784_17610 PF00440 Bacterial regulatory proteins, tetR family IC784_17615 PF00440 Bacterial regulatory proteins, tetR family IC784_17615 PF08360 QacR-like protein, C-terminal region IC784_17620 PF01323 DSBA-like thioredoxin domain IC784_17630 PF13419 Haloacid dehalogenase-like hydrolase IC784_17635 PF00106 short chain dehydrogenase IC784_17650 PF00583 Acetyltransferase (GNAT) family IC784_17650 PF00696 Amino acid kinase family IC784_17655 PF09084 NMT1/THI5 like IC784_17660 PF09084 NMT1/THI5 like IC784_17665 PF00296 Luciferase-like monooxygenase IC784_17670 PF00528 Binding-protein-dependent transport system inner membrane component IC784_17675 PF00005 ABC transporter IC784_17680 PF00440 Bacterial regulatory proteins, tetR family IC784_17680 PF08362 YcdC-like protein, C-terminal region IC784_17685 PF01048 Phosphorylase superfamily IC784_17695 PF01687 Riboflavin kinase IC784_17695 PF06574 FAD synthetase IC784_17700 PF06827 Zinc finger found in FPG and IleRS IC784_17700 PF00133 tRNA synthetases class I (I, L, M and V) IC784_17700 PF08264 Anticodon-binding domain of tRNA IC784_17710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC784_17755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IC784_17760 PF07859 alpha/beta hydrolase fold IC784_17785 PF01025 GrpE IC784_17790 PF00012 Hsp70 protein IC784_17810 PF13406 Transglycosylase SLT domain IC784_17815 PF02222 ATP-grasp domain IC784_17815 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IC784_17820 PF00731 AIR carboxylase IC784_17830 PF02875 Mur ligase family, glutamate ligase domain IC784_17830 PF08245 Mur ligase middle domain IC784_17830 PF01225 Mur ligase family, catalytic domain IC784_17840 PF01569 PAP2 superfamily IC784_17845 PF03741 Integral membrane protein TerC family IC784_17855 PF00355 Rieske [2Fe-2S] domain IC784_17860 PF01979 Amidohydrolase family IC784_17865 PF00156 Phosphoribosyl transferase domain IC784_17875 PF10411 Disulfide bond isomerase protein N-terminus IC784_17875 PF13098 Thioredoxin-like domain IC784_17880 PF02583 Metal-sensitive transcriptional repressor IC784_17885 PF10396 GTP-binding protein TrmE N-terminus IC784_17885 PF12631 MnmE helical domain IC784_17885 PF01926 50S ribosome-binding GTPase IC784_17890 PF14849 YidC periplasmic domain IC784_17890 PF02096 60Kd inner membrane protein IC784_17895 PF01809 Putative membrane protein insertion efficiency factor IC784_17900 PF00825 Ribonuclease P IC784_17905 PF00468 Ribosomal protein L34 IC784_17930 PF00589 Phage integrase family IC784_17930 PF13356 Arm DNA-binding domain IC784_17935 PF04151 Bacterial pre-peptidase C-terminal domain IC784_17945 PF16884 N-terminal domain of oxidoreductase IC784_17945 PF00107 Zinc-binding dehydrogenase IC784_17950 PF00440 Bacterial regulatory proteins, tetR family IC784_17950 PF16925 Tetracyclin repressor-like, C-terminal domain IC784_17960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC784_17970 PF00465 Iron-containing alcohol dehydrogenase IC784_17985 PF00756 Putative esterase IC784_17990 PF08240 Alcohol dehydrogenase GroES-like domain IC784_17990 PF00107 Zinc-binding dehydrogenase IC784_17995 PF02583 Metal-sensitive transcriptional repressor IC784_18005 PF01965 DJ-1/PfpI family IC784_18005 PF12833 Helix-turn-helix domain IC784_18010 PF00557 Metallopeptidase family M24 IC784_18010 PF01321 Creatinase/Prolidase N-terminal domain IC784_18015 PF00083 Sugar (and other) transporter IC784_18015 PF08946 Osmosensory transporter coiled coil IC784_18020 PF00892 EamA-like transporter family IC784_18030 PF00550 Phosphopantetheine attachment site IC784_18030 PF08659 KR domain IC784_18030 PF16197 Ketoacyl-synthetase C-terminal extension IC784_18030 PF14765 Polyketide synthase dehydratase IC784_18030 PF00698 Acyl transferase domain IC784_18030 PF08240 Alcohol dehydrogenase GroES-like domain IC784_18030 PF00109 Beta-ketoacyl synthase, N-terminal domain IC784_18030 PF02801 Beta-ketoacyl synthase, C-terminal domain IC784_18035 PF00107 Zinc-binding dehydrogenase IC784_18035 PF08240 Alcohol dehydrogenase GroES-like domain IC784_18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC784_18040 PF03466 LysR substrate binding domain IC784_18045 PF00106 short chain dehydrogenase IC784_18050 PF08240 Alcohol dehydrogenase GroES-like domain IC784_18050 PF00107 Zinc-binding dehydrogenase IC784_18095 PF05973 Phage derived protein Gp49-like (DUF891) IC784_18120 PF01202 Shikimate kinase IC784_18130 PF05973 Phage derived protein Gp49-like (DUF891) IC784_18275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IC784_18285 PF00563 EAL domain IC784_18285 PF11809 Domain of unknown function (DUF3330) IC784_18290 PF05052 MerE protein IC784_18295 PF13411 MerR HTH family regulatory protein IC784_18305 PF03203 MerC mercury resistance protein IC784_18310 PF00403 Heavy-metal-associated domain IC784_18325 PF13610 DDE domain IC784_18360 PF13737 Transposase DDE domain IC784_18375 PF10431 C-terminal, D2-small domain, of ClpB protein IC784_18375 PF00004 ATPase family associated with various cellular activities (AAA) IC784_18375 PF07724 AAA domain (Cdc48 subfamily) IC784_18375 PF17871 AAA lid domain IC784_18375 PF02861 Clp amino terminal domain, pathogenicity island component IC784_18400 PF00239 Resolvase, N terminal domain IC784_18400 PF02796 Helix-turn-helix domain of resolvase IC784_18405 PF00313 'Cold-shock' DNA-binding domain IC784_18440 PF05230 MASE2 domain IC784_18440 PF00990 Diguanylate cyclase, GGDEF domain IC784_18495 PF01381 Helix-turn-helix IC784_18500 PF05973 Phage derived protein Gp49-like (DUF891) IC784_18505 PF00916 Sulfate permease family IC784_18505 PF01740 STAS domain IC784_18510 PF00582 Universal stress protein family IC784_18520 PF04221 RelB antitoxin IC784_18525 PF01051 Initiator Replication protein IC784_18540 PF01381 Helix-turn-helix IC784_18540 PF09856 Predicted transcriptional regulator (DUF2083) IC784_18540 PF06114 IrrE N-terminal-like domain