locus-tag class description IC785_00005 PF00308 Bacterial dnaA protein IC785_00005 PF11638 DnaA N-terminal domain IC785_00005 PF08299 Bacterial dnaA protein helix-turn-helix IC785_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain IC785_00010 PF02767 DNA polymerase III beta subunit, central domain IC785_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain IC785_00015 PF02463 RecF/RecN/SMC N terminal domain IC785_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_00020 PF01751 Toprim domain IC785_00020 PF00986 DNA gyrase B subunit, carboxyl terminus IC785_00020 PF00204 DNA gyrase B IC785_00020 PF18053 DNA gyrase B subunit insert domain IC785_00030 PF09335 SNARE associated Golgi protein IC785_00035 PF12848 ABC transporter IC785_00035 PF00005 ABC transporter IC785_00055 PF01521 Iron-sulphur cluster biosynthesis IC785_00060 PF00561 alpha/beta hydrolase fold IC785_00065 PF03702 Anhydro-N-acetylmuramic acid kinase IC785_00070 PF00579 tRNA synthetases class I (W and Y) IC785_00100 PF02798 Glutathione S-transferase, N-terminal domain IC785_00110 PF00209 Sodium:neurotransmitter symporter family IC785_00120 PF01189 16S rRNA methyltransferase RsmB/F IC785_00120 PF01029 NusB family IC785_00125 PF00551 Formyl transferase IC785_00125 PF02911 Formyl transferase, C-terminal domain IC785_00130 PF00920 Dehydratase family IC785_00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_00145 PF03466 LysR substrate binding domain IC785_00150 PF00860 Permease family IC785_00155 PF00311 Phosphoenolpyruvate carboxylase IC785_00160 PF00440 Bacterial regulatory proteins, tetR family IC785_00160 PF08361 MAATS-type transcriptional repressor, C-terminal region IC785_00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC785_00170 PF00873 AcrB/AcrD/AcrF family IC785_00180 PF00226 DnaJ domain IC785_00180 PF01556 DnaJ C terminal domain IC785_00180 PF00684 DnaJ central domain IC785_00190 PF05173 Dihydrodipicolinate reductase, C-terminus IC785_00190 PF01113 Dihydrodipicolinate reductase, N-terminus IC785_00200 PF07690 Major Facilitator Superfamily IC785_00205 PF00248 Aldo/keto reductase family IC785_00210 PF03466 LysR substrate binding domain IC785_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_00230 PF00107 Zinc-binding dehydrogenase IC785_00230 PF08240 Alcohol dehydrogenase GroES-like domain IC785_00235 PF03352 Methyladenine glycosylase IC785_00250 PF10576 Iron-sulfur binding domain of endonuclease III IC785_00250 PF14815 NUDIX domain IC785_00250 PF00730 HhH-GPD superfamily base excision DNA repair protein IC785_00250 PF00633 Helix-hairpin-helix motif IC785_00265 PF07043 Protein of unknown function (DUF1328) IC785_00270 PF03692 Putative zinc- or iron-chelating domain IC785_00275 PF07995 Glucose / Sorbosone dehydrogenase IC785_00280 PF00004 ATPase family associated with various cellular activities (AAA) IC785_00280 PF16193 AAA C-terminal domain IC785_00280 PF12002 MgsA AAA+ ATPase C terminal IC785_00285 PF01226 Formate/nitrite transporter IC785_00295 PF01259 SAICAR synthetase IC785_00305 PF00701 Dihydrodipicolinate synthetase family IC785_00310 PF00857 Isochorismatase family IC785_00315 PF01758 Sodium Bile acid symporter family IC785_00320 PF01554 MatE IC785_00325 PF04463 Protein of unknown function (DUF523) IC785_00330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC785_00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC785_00345 PF14497 Glutathione S-transferase, C-terminal domain IC785_00345 PF02798 Glutathione S-transferase, N-terminal domain IC785_00355 PF00324 Amino acid permease IC785_00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain IC785_00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC785_00375 PF07702 UTRA domain IC785_00375 PF00392 Bacterial regulatory proteins, gntR family IC785_00380 PF05962 HutD IC785_00385 PF01175 Urocanase Rossmann-like domain IC785_00385 PF17392 Urocanase C-terminal domain IC785_00385 PF17391 Urocanase N-terminal domain IC785_00390 PF00221 Aromatic amino acid lyase IC785_00395 PF00324 Amino acid permease IC785_00400 PF01979 Amidohydrolase family IC785_00405 PF00491 Arginase family IC785_00415 PF13419 Haloacid dehalogenase-like hydrolase IC785_00420 PF01177 Asp/Glu/Hydantoin racemase IC785_00425 PF01810 LysE type translocator IC785_00455 PF01380 SIS domain IC785_00460 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_00460 PF14602 Hexapeptide repeat of succinyl-transferase IC785_00460 PF12804 MobA-like NTP transferase domain IC785_00465 PF04608 Phosphatidylglycerophosphatase A IC785_00470 PF00586 AIR synthase related protein, N-terminal domain IC785_00470 PF02769 AIR synthase related protein, C-terminal domain IC785_00475 PF01029 NusB family IC785_00480 PF00885 6,7-dimethyl-8-ribityllumazine synthase IC785_00485 PF00925 GTP cyclohydrolase II IC785_00485 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IC785_00510 PF02580 D-Tyr-tRNA(Tyr) deacylase IC785_00515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IC785_00515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IC785_00520 PF00581 Rhodanese-like domain IC785_00525 PF02666 Phosphatidylserine decarboxylase IC785_00530 PF03069 Acetamidase/Formamidase family IC785_00545 PF11808 Phosphate regulon sensor protein PhoR IC785_00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_00545 PF00989 PAS fold IC785_00545 PF00512 His Kinase A (phospho-acceptor) domain IC785_00550 PF00486 Transcriptional regulatory protein, C terminal IC785_00550 PF00072 Response regulator receiver domain IC785_00560 PF00106 short chain dehydrogenase IC785_00565 PF01554 MatE IC785_00570 PF00155 Aminotransferase class I and II IC785_00575 PF04286 Protein of unknown function (DUF445) IC785_00590 PF04262 Glutamate-cysteine ligase IC785_00595 PF02600 Disulfide bond formation protein DsbB IC785_00600 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IC785_00600 PF04717 Type VI secretion system, phage-baseplate injector IC785_00600 PF13296 Putative type VI secretion system Rhs element Vgr IC785_00605 PF01476 LysM domain IC785_00605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IC785_00625 PF13817 IS66 C-terminal element IC785_00625 PF13007 Transposase C of IS166 homeodomain IC785_00625 PF13005 zinc-finger binding domain of transposase IS66 IC785_00625 PF03050 Transposase IS66 family IC785_00670 PF05728 Uncharacterised protein family (UPF0227) IC785_00675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_00675 PF00204 DNA gyrase B IC785_00675 PF00986 DNA gyrase B subunit, carboxyl terminus IC785_00675 PF01751 Toprim domain IC785_00680 PF04115 Ureidoglycolate lyase IC785_00685 PF03561 Allantoicase repeat IC785_00690 PF01494 FAD binding domain IC785_00700 PF00860 Permease family IC785_00705 PF00576 HIUase/Transthyretin family IC785_00725 PF12796 Ankyrin repeats (3 copies) IC785_00725 PF07722 Peptidase C26 IC785_00735 PF02683 Cytochrome C biogenesis protein transmembrane region IC785_00735 PF11412 Disulphide bond corrector protein DsbC IC785_00740 PF00990 Diguanylate cyclase, GGDEF domain IC785_00740 PF17151 Periplasmic sensor domain IC785_00745 PF07859 alpha/beta hydrolase fold IC785_00755 PF03960 ArsC family IC785_00760 PF03372 Endonuclease/Exonuclease/phosphatase family IC785_00765 PF00156 Phosphoribosyl transferase domain IC785_00775 PF00593 TonB dependent receptor IC785_00775 PF07715 TonB-dependent Receptor Plug Domain IC785_00785 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IC785_00785 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IC785_00790 PF03033 Glycosyltransferase family 28 N-terminal domain IC785_00790 PF04101 Glycosyltransferase family 28 C-terminal domain IC785_00795 PF01225 Mur ligase family, catalytic domain IC785_00795 PF02875 Mur ligase family, glutamate ligase domain IC785_00795 PF08245 Mur ligase middle domain IC785_00800 PF01820 D-ala D-ala ligase N-terminus IC785_00800 PF07478 D-ala D-ala ligase C-terminus IC785_00805 PF03799 Cell division protein FtsQ IC785_00805 PF08478 POTRA domain, FtsQ-type IC785_00810 PF02491 SHS2 domain inserted in FTSA IC785_00815 PF00091 Tubulin/FtsZ family, GTPase domain IC785_00815 PF12327 FtsZ family, C-terminal domain IC785_00820 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IC785_00830 PF01551 Peptidase family M23 IC785_00835 PF17831 Pyruvate dehydrogenase E1 component middle domain IC785_00835 PF00456 Transketolase, thiamine diphosphate binding domain IC785_00840 PF02817 e3 binding domain IC785_00840 PF00364 Biotin-requiring enzyme IC785_00840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC785_00850 PF01169 Uncharacterized protein family UPF0016 IC785_00855 PF01613 Flavin reductase like domain IC785_00855 PF00258 Flavodoxin IC785_00860 PF03692 Putative zinc- or iron-chelating domain IC785_00865 PF00571 CBS domain IC785_00865 PF00478 IMP dehydrogenase / GMP reductase domain IC785_00870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC785_00870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC785_00870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC785_00870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC785_00875 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IC785_00875 PF01243 Pyridoxamine 5'-phosphate oxidase IC785_00880 PF17768 RecJ OB domain IC785_00880 PF02272 DHHA1 domain IC785_00880 PF01368 DHH family IC785_00900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC785_00905 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IC785_00910 PF04452 RNA methyltransferase IC785_00915 PF05552 Conserved TM helix IC785_00915 PF00924 Mechanosensitive ion channel IC785_00925 PF16177 Acetyl-coenzyme A synthetase N-terminus IC785_00925 PF00501 AMP-binding enzyme IC785_00925 PF13193 AMP-binding enzyme C-terminal domain IC785_00930 PF00857 Isochorismatase family IC785_00935 PF01037 Lrp/AsnC ligand binding domain IC785_00940 PF00296 Luciferase-like monooxygenase IC785_00945 PF03358 NADPH-dependent FMN reductase IC785_00950 PF00072 Response regulator receiver domain IC785_00950 PF00196 Bacterial regulatory proteins, luxR family IC785_00960 PF01627 Hpt domain IC785_00960 PF00512 His Kinase A (phospho-acceptor) domain IC785_00960 PF00072 Response regulator receiver domain IC785_00960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_00960 PF00672 HAMP domain IC785_00965 PF04341 Protein of unknown function, DUF485 IC785_00970 PF00474 Sodium:solute symporter family IC785_00980 PF02028 BCCT, betaine/carnitine/choline family transporter IC785_00990 PF00990 Diguanylate cyclase, GGDEF domain IC785_00995 PF17755 UvrA DNA-binding domain IC785_00995 PF17760 UvrA interaction domain IC785_01000 PF00440 Bacterial regulatory proteins, tetR family IC785_01000 PF16925 Tetracyclin repressor-like, C-terminal domain IC785_01005 PF08240 Alcohol dehydrogenase GroES-like domain IC785_01005 PF00107 Zinc-binding dehydrogenase IC785_01015 PF06942 GlpM protein IC785_01020 PF00106 short chain dehydrogenase IC785_01025 PF09278 MerR, DNA binding IC785_01025 PF00376 MerR family regulatory protein IC785_01030 PF02581 Thiamine monophosphate synthase IC785_01030 PF03070 TENA/THI-4/PQQC family IC785_01030 PF08543 Phosphomethylpyrimidine kinase IC785_01040 PF07690 Major Facilitator Superfamily IC785_01045 PF00436 Single-strand binding protein family IC785_01075 PF01425 Amidase IC785_01100 PF00271 Helicase conserved C-terminal domain IC785_01100 PF08463 EcoEI R protein C-terminal IC785_01100 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) IC785_01100 PF04851 Type III restriction enzyme, res subunit IC785_01110 PF02796 Helix-turn-helix domain of resolvase IC785_01110 PF00239 Resolvase, N terminal domain IC785_01120 PF03591 AzlC protein IC785_01130 PF00324 Amino acid permease IC785_01135 PF00392 Bacterial regulatory proteins, gntR family IC785_01135 PF00155 Aminotransferase class I and II IC785_01140 PF00202 Aminotransferase class-III IC785_01145 PF00171 Aldehyde dehydrogenase family IC785_01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_01155 PF00857 Isochorismatase family IC785_01160 PF02678 Pirin IC785_01160 PF05726 Pirin C-terminal cupin domain IC785_01165 PF01593 Flavin containing amine oxidoreductase IC785_01190 PF07690 Major Facilitator Superfamily IC785_01195 PF03466 LysR substrate binding domain IC785_01195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_01215 PF00248 Aldo/keto reductase family IC785_01220 PF12833 Helix-turn-helix domain IC785_01220 PF02311 AraC-like ligand binding domain IC785_01235 PF01638 HxlR-like helix-turn-helix IC785_01245 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IC785_01265 PF01638 HxlR-like helix-turn-helix IC785_01270 PF02525 Flavodoxin-like fold IC785_01290 PF02705 K+ potassium transporter IC785_01330 PF00977 Histidine biosynthesis protein IC785_01335 PF01636 Phosphotransferase enzyme family IC785_01365 PF00977 Histidine biosynthesis protein IC785_01380 PF00117 Glutamine amidotransferase class-I IC785_01385 PF00475 Imidazoleglycerol-phosphate dehydratase IC785_01405 PF00583 Acetyltransferase (GNAT) family IC785_01410 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IC785_01410 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IC785_01420 PF00512 His Kinase A (phospho-acceptor) domain IC785_01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_01420 PF00672 HAMP domain IC785_01425 PF00486 Transcriptional regulatory protein, C terminal IC785_01425 PF00072 Response regulator receiver domain IC785_01430 PF17674 HHH domain IC785_01430 PF00575 S1 RNA binding domain IC785_01430 PF16921 Tex protein YqgF-like domain IC785_01430 PF09371 Tex-like protein N-terminal domain IC785_01440 PF01740 STAS domain IC785_01440 PF00916 Sulfate permease family IC785_01445 PF00106 short chain dehydrogenase IC785_01450 PF01053 Cys/Met metabolism PLP-dependent enzyme IC785_01455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC785_01455 PF00205 Thiamine pyrophosphate enzyme, central domain IC785_01455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC785_01460 PF00005 ABC transporter IC785_01460 PF12848 ABC transporter IC785_01475 PF04191 Phospholipid methyltransferase IC785_01490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC785_01490 PF00529 HlyD membrane-fusion protein of T1SS IC785_01495 PF00873 AcrB/AcrD/AcrF family IC785_01500 PF01545 Cation efflux family IC785_01530 PF00324 Amino acid permease IC785_01545 PF00749 tRNA synthetases class I (E and Q), catalytic domain IC785_01560 PF01795 MraW methylase family IC785_01575 PF02875 Mur ligase family, glutamate ligase domain IC785_01575 PF01225 Mur ligase family, catalytic domain IC785_01575 PF08245 Mur ligase middle domain IC785_01580 PF01225 Mur ligase family, catalytic domain IC785_01580 PF02875 Mur ligase family, glutamate ligase domain IC785_01580 PF08245 Mur ligase middle domain IC785_01585 PF00953 Glycosyl transferase family 4 IC785_01595 PF13847 Methyltransferase domain IC785_01600 PF00912 Transglycosylase IC785_01600 PF00905 Penicillin binding protein transpeptidase domain IC785_01600 PF17092 Penicillin-binding protein OB-like domain IC785_01605 PF11104 Type IV pilus assembly protein PilM; IC785_01610 PF05137 Fimbrial assembly protein (PilN) IC785_01615 PF04350 Pilus assembly protein, PilO IC785_01625 PF07660 Secretin and TonB N terminus short domain IC785_01625 PF03958 Bacterial type II/III secretion system short domain IC785_01625 PF00263 Bacterial type II and III secretion system protein IC785_01625 PF11741 AMIN domain IC785_01630 PF01202 Shikimate kinase IC785_01635 PF01761 3-dehydroquinate synthase IC785_01645 PF01493 GXGXG motif IC785_01645 PF01645 Conserved region in glutamate synthase IC785_01645 PF04898 Glutamate synthase central domain IC785_01645 PF00310 Glutamine amidotransferases class-II IC785_01650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IC785_01650 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_01660 PF04011 LemA family IC785_01665 PF04536 TPM domain IC785_01675 PF00114 Pilin (bacterial filament) IC785_01675 PF07963 Prokaryotic N-terminal methylation motif IC785_01685 PF11846 Virulence factor membrane-bound polymerase, C-terminal IC785_01685 PF15864 Protein glycosylation ligase IC785_01685 PF04932 O-Antigen ligase IC785_01690 PF00210 Ferritin-like domain IC785_01695 PF04324 BFD-like [2Fe-2S] binding domain IC785_01700 PF01042 Endoribonuclease L-PSP IC785_01705 PF13291 ACT domain IC785_01705 PF04607 Region found in RelA / SpoT proteins IC785_01705 PF02824 TGS domain IC785_01715 PF01192 RNA polymerase Rpb6 IC785_01720 PF00625 Guanylate kinase IC785_01725 PF02401 LytB protein IC785_01735 PF07963 Prokaryotic N-terminal methylation motif IC785_01735 PF00114 Pilin (bacterial filament) IC785_01760 PF07963 Prokaryotic N-terminal methylation motif IC785_01760 PF00114 Pilin (bacterial filament) IC785_01765 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor IC785_01765 PF07963 Prokaryotic N-terminal methylation motif IC785_01770 PF00886 Ribosomal protein S16 IC785_01775 PF01782 RimM N-terminal domain IC785_01775 PF05239 PRC-barrel domain IC785_01780 PF01746 tRNA (Guanine-1)-methyltransferase IC785_01785 PF01245 Ribosomal protein L19 IC785_01790 PF00561 alpha/beta hydrolase fold IC785_01795 PF03280 Proteobacterial lipase chaperone protein IC785_01800 PF16198 tRNA pseudouridylate synthase B C-terminal domain IC785_01800 PF09157 Pseudouridine synthase II TruB, C-terminal IC785_01800 PF01509 TruB family pseudouridylate synthase (N terminal domain) IC785_01805 PF01925 Sulfite exporter TauE/SafE IC785_01815 PF00892 EamA-like transporter family IC785_01820 PF00892 EamA-like transporter family IC785_01825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IC785_01825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IC785_01830 PF02913 FAD linked oxidases, C-terminal domain IC785_01830 PF01565 FAD binding domain IC785_01840 PF03992 Antibiotic biosynthesis monooxygenase IC785_01845 PF02525 Flavodoxin-like fold IC785_01855 PF07690 Major Facilitator Superfamily IC785_01860 PF12805 FUSC-like inner membrane protein yccS IC785_01865 PF00080 Copper/zinc superoxide dismutase (SODC) IC785_01870 PF01594 AI-2E family transporter IC785_01875 PF13614 AAA domain IC785_01895 PF08241 Methyltransferase domain IC785_01905 PF00324 Amino acid permease IC785_01910 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IC785_01910 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IC785_01915 PF00202 Aminotransferase class-III IC785_01920 PF04958 Arginine N-succinyltransferase beta subunit IC785_01925 PF00171 Aldehyde dehydrogenase family IC785_01930 PF04996 Succinylarginine dihydrolase IC785_01935 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IC785_01950 PF05922 Peptidase inhibitor I9 IC785_01950 PF00082 Subtilase family IC785_01965 PF03466 LysR substrate binding domain IC785_01965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_01970 PF01177 Asp/Glu/Hydantoin racemase IC785_01975 PF03466 LysR substrate binding domain IC785_01975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_01980 PF00892 EamA-like transporter family IC785_01990 PF05746 DALR anticodon binding domain IC785_01990 PF02092 Glycyl-tRNA synthetase beta subunit IC785_01995 PF02091 Glycyl-tRNA synthetase alpha subunit IC785_02020 PF01743 Poly A polymerase head domain IC785_02020 PF00571 CBS domain IC785_02025 PF04024 PspC domain IC785_02035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_02035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_02035 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_02035 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC785_02045 PF01488 Shikimate / quinate 5-dehydrogenase IC785_02045 PF08501 Shikimate dehydrogenase substrate binding domain IC785_02045 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IC785_02050 PF01218 Coproporphyrinogen III oxidase IC785_02055 PF00925 GTP cyclohydrolase II IC785_02060 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IC785_02060 PF02779 Transketolase, pyrimidine binding domain IC785_02060 PF02780 Transketolase, C-terminal domain IC785_02065 PF00459 Inositol monophosphatase family IC785_02070 PF00270 DEAD/DEAH box helicase IC785_02070 PF00271 Helicase conserved C-terminal domain IC785_02075 PF00005 ABC transporter IC785_02080 PF02405 Permease MlaE IC785_02090 PF05494 MlaC protein IC785_02100 PF01544 CorA-like Mg2+ transporter protein IC785_02105 PF03641 Possible lysine decarboxylase IC785_02110 PF00293 NUDIX domain IC785_02115 PF00156 Phosphoribosyl transferase domain IC785_02120 PF00270 DEAD/DEAH box helicase IC785_02120 PF00271 Helicase conserved C-terminal domain IC785_02120 PF17191 RecG wedge domain IC785_02135 PF01553 Acyltransferase IC785_02145 PF00375 Sodium:dicarboxylate symporter family IC785_02155 PF01926 50S ribosome-binding GTPase IC785_02160 PF02082 Transcriptional regulator IC785_02165 PF00175 Oxidoreductase NAD-binding domain IC785_02165 PF00042 Globin IC785_02165 PF00970 Oxidoreductase FAD-binding domain IC785_02170 PF05872 Bacterial protein of unknown function (DUF853) IC785_02175 PF01053 Cys/Met metabolism PLP-dependent enzyme IC785_02180 PF00117 Glutamine amidotransferase class-I IC785_02185 PF00338 Ribosomal protein S10p/S20e IC785_02190 PF00297 Ribosomal protein L3 IC785_02195 PF00573 Ribosomal protein L4/L1 family IC785_02200 PF00276 Ribosomal protein L23 IC785_02205 PF03947 Ribosomal Proteins L2, C-terminal domain IC785_02205 PF00181 Ribosomal Proteins L2, RNA binding domain IC785_02210 PF00203 Ribosomal protein S19 IC785_02215 PF00237 Ribosomal protein L22p/L17e IC785_02220 PF00189 Ribosomal protein S3, C-terminal domain IC785_02220 PF07650 KH domain IC785_02225 PF00252 Ribosomal protein L16p/L10e IC785_02230 PF00831 Ribosomal L29 protein IC785_02235 PF00366 Ribosomal protein S17 IC785_02240 PF00238 Ribosomal protein L14p/L23e IC785_02245 PF00467 KOW motif IC785_02245 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IC785_02250 PF00673 ribosomal L5P family C-terminus IC785_02250 PF00281 Ribosomal protein L5 IC785_02255 PF00253 Ribosomal protein S14p/S29e IC785_02260 PF00410 Ribosomal protein S8 IC785_02265 PF00347 Ribosomal protein L6 IC785_02270 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IC785_02275 PF00333 Ribosomal protein S5, N-terminal domain IC785_02275 PF03719 Ribosomal protein S5, C-terminal domain IC785_02280 PF00327 Ribosomal protein L30p/L7e IC785_02285 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IC785_02290 PF00344 SecY translocase IC785_02295 PF00444 Ribosomal protein L36 IC785_02300 PF00416 Ribosomal protein S13/S18 IC785_02305 PF00411 Ribosomal protein S11 IC785_02310 PF00163 Ribosomal protein S4/S9 N-terminal domain IC785_02310 PF01479 S4 domain IC785_02315 PF01000 RNA polymerase Rpb3/RpoA insert domain IC785_02315 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IC785_02315 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IC785_02320 PF01196 Ribosomal protein L17 IC785_02325 PF00743 Flavin-binding monooxygenase-like IC785_02330 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_02330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_02330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_02335 PF03937 Flavinator of succinate dehydrogenase IC785_02365 PF09526 Probable metal-binding protein (DUF2387) IC785_02370 PF01432 Peptidase family M3 IC785_02375 PF00773 RNB domain IC785_02375 PF00575 S1 RNA binding domain IC785_02375 PF08461 Ribonuclease R winged-helix domain IC785_02375 PF17876 Cold shock domain IC785_02375 PF08206 Ribonuclease B OB domain IC785_02420 PF01557 Fumarylacetoacetate (FAA) hydrolase family IC785_02425 PF12833 Helix-turn-helix domain IC785_02435 PF03631 Virulence factor BrkB IC785_02440 PF03358 NADPH-dependent FMN reductase IC785_02465 PF02130 Uncharacterized protein family UPF0054 IC785_02470 PF02562 PhoH-like protein IC785_02475 PF04055 Radical SAM superfamily IC785_02475 PF01938 TRAM domain IC785_02475 PF00919 Uncharacterized protein family UPF0004 IC785_02480 PF01551 Peptidase family M23 IC785_02480 PF10145 Phage-related minor tail protein IC785_02480 PF01464 Transglycosylase SLT domain IC785_02490 PF00056 lactate/malate dehydrogenase, NAD binding domain IC785_02490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IC785_02510 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IC785_02515 PF01066 CDP-alcohol phosphatidyltransferase IC785_02580 PF13302 Acetyltransferase (GNAT) domain IC785_02585 PF17932 Tetracyclin repressor-like, C-terminal domain IC785_02585 PF00440 Bacterial regulatory proteins, tetR family IC785_02600 PF01039 Carboxyl transferase domain IC785_02605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_02605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_02605 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_02610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC785_02610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC785_02610 PF00378 Enoyl-CoA hydratase/isomerase IC785_02615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC785_02615 PF02785 Biotin carboxylase C-terminal domain IC785_02615 PF00289 Biotin carboxylase, N-terminal domain IC785_02615 PF00364 Biotin-requiring enzyme IC785_02645 PF04386 Stringent starvation protein B IC785_02650 PF00043 Glutathione S-transferase, C-terminal domain IC785_02650 PF13417 Glutathione S-transferase, N-terminal domain IC785_02655 PF00380 Ribosomal protein S9/S16 IC785_02660 PF00572 Ribosomal protein L13 IC785_02665 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IC785_02670 PF00398 Ribosomal RNA adenine dimethylase IC785_02675 PF00149 Calcineurin-like phosphoesterase IC785_02695 PF16360 GTP-binding GTPase Middle Region IC785_02695 PF13167 GTP-binding GTPase N-terminal IC785_02695 PF01926 50S ribosome-binding GTPase IC785_02705 PF13091 PLD-like domain IC785_02710 PF00149 Calcineurin-like phosphoesterase IC785_02710 PF10518 TAT (twin-arginine translocation) pathway signal sequence IC785_02715 PF00691 OmpA family IC785_02715 PF01389 OmpA-like transmembrane domain IC785_02720 PF00990 Diguanylate cyclase, GGDEF domain IC785_02720 PF17152 Periplasmic sensor domain IC785_02755 PF00403 Heavy-metal-associated domain IC785_02755 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_02755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC785_02765 PF04273 Putative phosphatase (DUF442) IC785_02765 PF00753 Metallo-beta-lactamase superfamily IC785_02770 PF00561 alpha/beta hydrolase fold IC785_02775 PF00085 Thioredoxin IC785_02780 PF03061 Thioesterase superfamily IC785_02795 PF04461 Protein of unknown function (DUF520) IC785_02805 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IC785_02805 PF01266 FAD dependent oxidoreductase IC785_02815 PF03795 YCII-related domain IC785_02820 PF04279 Intracellular septation protein A IC785_02825 PF02811 PHP domain IC785_02830 PF01062 Bestrophin, RFP-TM, chloride channel IC785_02835 PF04002 RadC-like JAB domain IC785_02840 PF04127 DNA / pantothenate metabolism flavoprotein IC785_02840 PF02441 Flavoprotein IC785_02845 PF02355 Protein export membrane protein IC785_02845 PF07549 SecD/SecF GG Motif IC785_02850 PF13721 SecD export protein N-terminal TM region IC785_02850 PF02355 Protein export membrane protein IC785_02850 PF07549 SecD/SecF GG Motif IC785_02855 PF02699 Preprotein translocase subunit IC785_02860 PF01702 Queuine tRNA-ribosyltransferase IC785_02875 PF02547 Queuosine biosynthesis protein IC785_02890 PF02463 RecF/RecN/SMC N terminal domain IC785_02895 PF00072 Response regulator receiver domain IC785_02895 PF09308 LuxQ, periplasmic IC785_02895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_02895 PF00512 His Kinase A (phospho-acceptor) domain IC785_02905 PF01063 Amino-transferase class IV IC785_02915 PF00884 Sulfatase IC785_02925 PF01522 Polysaccharide deacetylase IC785_02930 PF00535 Glycosyl transferase family 2 IC785_02935 PF13439 Glycosyltransferase Family 4 IC785_02935 PF00534 Glycosyl transferases group 1 IC785_02970 PF17103 Stealth protein CR4, conserved region 4 IC785_02970 PF11380 Stealth protein CR2, conserved region 2 IC785_02970 PF17101 Stealth protein CR1, conserved region 1 IC785_02975 PF01336 OB-fold nucleic acid binding domain IC785_02975 PF00152 tRNA synthetases class II (D, K and N) IC785_02975 PF02938 GAD domain IC785_02985 PF00593 TonB dependent receptor IC785_02985 PF07715 TonB-dependent Receptor Plug Domain IC785_03005 PF06146 Phosphate-starvation-inducible E IC785_03010 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC785_03010 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_03010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_03010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_03015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_03015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_03015 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_03015 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC785_03025 PF00512 His Kinase A (phospho-acceptor) domain IC785_03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_03025 PF00672 HAMP domain IC785_03030 PF00072 Response regulator receiver domain IC785_03030 PF00486 Transcriptional regulatory protein, C terminal IC785_03040 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IC785_03060 PF01923 Cobalamin adenosyltransferase IC785_03065 PF07715 TonB-dependent Receptor Plug Domain IC785_03065 PF00593 TonB dependent receptor IC785_03070 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IC785_03075 PF00291 Pyridoxal-phosphate dependent enzyme IC785_03105 PF00290 Tryptophan synthase alpha chain IC785_03110 PF01039 Carboxyl transferase domain IC785_03115 PF02875 Mur ligase family, glutamate ligase domain IC785_03115 PF08245 Mur ligase middle domain IC785_03130 PF00753 Metallo-beta-lactamase superfamily IC785_03135 PF10417 C-terminal domain of 1-Cys peroxiredoxin IC785_03135 PF00578 AhpC/TSA family IC785_03140 PF01043 SecA preprotein cross-linking domain IC785_03140 PF07517 SecA DEAD-like domain IC785_03140 PF02810 SEC-C motif IC785_03140 PF07516 SecA Wing and Scaffold domain IC785_03150 PF07690 Major Facilitator Superfamily IC785_03150 PF00083 Sugar (and other) transporter IC785_03155 PF03006 Haemolysin-III related IC785_03165 PF13673 Acetyltransferase (GNAT) domain IC785_03180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC785_03180 PF00378 Enoyl-CoA hydratase/isomerase IC785_03180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC785_03185 PF02803 Thiolase, C-terminal domain IC785_03185 PF00108 Thiolase, N-terminal domain IC785_03190 PF12833 Helix-turn-helix domain IC785_03190 PF02311 AraC-like ligand binding domain IC785_03195 PF02515 CoA-transferase family III IC785_03200 PF04966 Carbohydrate-selective porin, OprB family IC785_03205 PF01011 PQQ enzyme repeat IC785_03210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IC785_03210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IC785_03230 PF07963 Prokaryotic N-terminal methylation motif IC785_03230 PF00114 Pilin (bacterial filament) IC785_03235 PF13505 Outer membrane protein beta-barrel domain IC785_03235 PF00691 OmpA family IC785_03245 PF01139 tRNA-splicing ligase RtcB IC785_03250 PF00324 Amino acid permease IC785_03255 PF05175 Methyltransferase small domain IC785_03255 PF08468 Methyltransferase small domain N-terminal IC785_03260 PF00860 Permease family IC785_03265 PF00679 Elongation factor G C-terminus IC785_03265 PF00009 Elongation factor Tu GTP binding domain IC785_03265 PF03144 Elongation factor Tu domain 2 IC785_03270 PF01741 Large-conductance mechanosensitive channel, MscL IC785_03285 PF06827 Zinc finger found in FPG and IleRS IC785_03285 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IC785_03285 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IC785_03290 PF02245 Methylpurine-DNA glycosylase (MPG) IC785_03295 PF00593 TonB dependent receptor IC785_03295 PF07715 TonB-dependent Receptor Plug Domain IC785_03300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC785_03305 PF03547 Membrane transport protein IC785_03315 PF13098 Thioredoxin-like domain IC785_03315 PF10411 Disulfide bond isomerase protein N-terminus IC785_03320 PF01571 Aminomethyltransferase folate-binding domain IC785_03330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IC785_03330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IC785_03335 PF00860 Permease family IC785_03340 PF01613 Flavin reductase like domain IC785_03345 PF01042 Endoribonuclease L-PSP IC785_03350 PF00857 Isochorismatase family IC785_03355 PF00296 Luciferase-like monooxygenase IC785_03360 PF00881 Nitroreductase family IC785_03365 PF12697 Alpha/beta hydrolase family IC785_03370 PF04343 Protein of unknown function, DUF488 IC785_03375 PF03831 PhnA domain IC785_03375 PF08274 PhnA Zinc-Ribbon IC785_03380 PF07411 Domain of unknown function (DUF1508) IC785_03385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC785_03385 PF04073 Aminoacyl-tRNA editing domain IC785_03385 PF03129 Anticodon binding domain IC785_03390 PF00873 AcrB/AcrD/AcrF family IC785_03405 PF00072 Response regulator receiver domain IC785_03410 PF00072 Response regulator receiver domain IC785_03415 PF01584 CheW-like domain IC785_03420 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IC785_03420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IC785_03425 PF01584 CheW-like domain IC785_03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_03425 PF01627 Hpt domain IC785_03425 PF00072 Response regulator receiver domain IC785_03435 PF06969 HemN C-terminal domain IC785_03435 PF04055 Radical SAM superfamily IC785_03445 PF01546 Peptidase family M20/M25/M40 IC785_03445 PF07687 Peptidase dimerisation domain IC785_03460 PF04304 Protein of unknown function (DUF454) IC785_03465 PF03734 L,D-transpeptidase catalytic domain IC785_03465 PF17969 L,D-transpeptidase C-terminal domain IC785_03505 PF00258 Flavodoxin IC785_03505 PF00667 FAD binding domain IC785_03505 PF00175 Oxidoreductase NAD-binding domain IC785_03515 PF12805 FUSC-like inner membrane protein yccS IC785_03520 PF07690 Major Facilitator Superfamily IC785_03525 PF00881 Nitroreductase family IC785_03540 PF01235 Sodium:alanine symporter family IC785_03545 PF01734 Patatin-like phospholipase IC785_03550 PF00291 Pyridoxal-phosphate dependent enzyme IC785_03550 PF13291 ACT domain IC785_03555 PF05992 SbmA/BacA-like family IC785_03585 PF02934 GatB/GatE catalytic domain IC785_03585 PF02637 GatB domain IC785_03590 PF01425 Amidase IC785_03595 PF02686 Glu-tRNAGln amidotransferase C subunit IC785_03605 PF04085 rod shape-determining protein MreC IC785_03610 PF04093 rod shape-determining protein MreD IC785_03615 PF02545 Maf-like protein IC785_03620 PF10150 Ribonuclease E/G family IC785_03620 PF00575 S1 RNA binding domain IC785_03630 PF06974 Protein of unknown function (DUF1298) IC785_03630 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IC785_03635 PF01507 Phosphoadenosine phosphosulfate reductase family IC785_03650 PF02525 Flavodoxin-like fold IC785_03670 PF02673 Bacitracin resistance protein BacA IC785_03675 PF06719 AraC-type transcriptional regulator N-terminus IC785_03675 PF12833 Helix-turn-helix domain IC785_03680 PF09277 Erythronolide synthase, docking IC785_03680 PF16197 Ketoacyl-synthetase C-terminal extension IC785_03680 PF00109 Beta-ketoacyl synthase, N-terminal domain IC785_03680 PF02801 Beta-ketoacyl synthase, C-terminal domain IC785_03680 PF08240 Alcohol dehydrogenase GroES-like domain IC785_03680 PF00550 Phosphopantetheine attachment site IC785_03680 PF14765 Polyketide synthase dehydratase IC785_03680 PF08990 Erythronolide synthase docking IC785_03680 PF08659 KR domain IC785_03680 PF00698 Acyl transferase domain IC785_03685 PF01965 DJ-1/PfpI family IC785_03705 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IC785_03710 PF09297 NADH pyrophosphatase zinc ribbon domain IC785_03710 PF00293 NUDIX domain IC785_03715 PF00324 Amino acid permease IC785_03720 PF04303 PrpF protein IC785_03725 PF00348 Polyprenyl synthetase IC785_03730 PF04237 YjbR IC785_03735 PF01145 SPFH domain / Band 7 family IC785_03745 PF01734 Patatin-like phospholipase IC785_03765 PF08019 Phosphoethanolamine transferase EptA/EptB IC785_03765 PF00884 Sulfatase IC785_03770 PF00072 Response regulator receiver domain IC785_03770 PF00486 Transcriptional regulatory protein, C terminal IC785_03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_03775 PF00512 His Kinase A (phospho-acceptor) domain IC785_03775 PF08521 Two-component sensor kinase N-terminal IC785_03785 PF00909 Ammonium Transporter Family IC785_03790 PF03466 LysR substrate binding domain IC785_03790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_03810 PF10458 Valyl tRNA synthetase tRNA binding arm IC785_03810 PF08264 Anticodon-binding domain of tRNA IC785_03810 PF00133 tRNA synthetases class I (I, L, M and V) IC785_03820 PF10458 Valyl tRNA synthetase tRNA binding arm IC785_03820 PF00133 tRNA synthetases class I (I, L, M and V) IC785_03820 PF08264 Anticodon-binding domain of tRNA IC785_03840 PF01906 Putative heavy-metal-binding IC785_03845 PF01906 Putative heavy-metal-binding IC785_03850 PF02321 Outer membrane efflux protein IC785_03855 PF00873 AcrB/AcrD/AcrF family IC785_03860 PF00529 HlyD membrane-fusion protein of T1SS IC785_03860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC785_03865 PF01569 PAP2 superfamily IC785_03875 PF00348 Polyprenyl synthetase IC785_03885 PF00829 Ribosomal prokaryotic L21 protein IC785_03890 PF01016 Ribosomal L27 protein IC785_03895 PF03548 Outer membrane lipoprotein carrier protein LolA IC785_03905 PF02403 Seryl-tRNA synthetase N-terminal domain IC785_03905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC785_03910 PF10414 Sirohaem synthase dimerisation region IC785_03910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IC785_03910 PF14824 Sirohaem biosynthesis protein central IC785_03915 PF00588 SpoU rRNA Methylase family IC785_03920 PF01638 HxlR-like helix-turn-helix IC785_03925 PF03358 NADPH-dependent FMN reductase IC785_03930 PF13520 Amino acid permease IC785_03935 PF00465 Iron-containing alcohol dehydrogenase IC785_03945 PF03099 Biotin/lipoate A/B protein ligase family IC785_03950 PF04359 Protein of unknown function (DUF493) IC785_03955 PF03979 Sigma-70 factor, region 1.1 IC785_03955 PF04539 Sigma-70 region 3 IC785_03955 PF04546 Sigma-70, non-essential region IC785_03955 PF04542 Sigma-70 region 2 IC785_03955 PF04545 Sigma-70, region 4 IC785_03955 PF00140 Sigma-70 factor, region 1.2 IC785_03970 PF17773 UPF0176 acylphosphatase like domain IC785_03970 PF00581 Rhodanese-like domain IC785_03980 PF00285 Citrate synthase, C-terminal domain IC785_03985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IC785_03990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IC785_03995 PF02910 Fumarate reductase flavoprotein C-term IC785_03995 PF00890 FAD binding domain IC785_04000 PF13085 2Fe-2S iron-sulfur cluster binding domain IC785_04015 PF02779 Transketolase, pyrimidine binding domain IC785_04015 PF16870 2-oxoglutarate dehydrogenase C-terminal IC785_04015 PF00676 Dehydrogenase E1 component IC785_04015 PF16078 2-oxoglutarate dehydrogenase N-terminus IC785_04020 PF00364 Biotin-requiring enzyme IC785_04020 PF02817 e3 binding domain IC785_04020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC785_04025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC785_04025 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_04030 PF00549 CoA-ligase IC785_04030 PF08442 ATP-grasp domain IC785_04035 PF00549 CoA-ligase IC785_04035 PF02629 CoA binding domain IC785_04040 PF00579 tRNA synthetases class I (W and Y) IC785_04045 PF05661 Protein of unknown function (DUF808) IC785_04050 PF04228 Putative neutral zinc metallopeptidase IC785_04055 PF00999 Sodium/hydrogen exchanger family IC785_04070 PF00582 Universal stress protein family IC785_04075 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_04080 PF03449 Transcription elongation factor, N-terminal IC785_04080 PF01272 Transcription elongation factor, GreA/GreB, C-term IC785_04085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC785_04085 PF02142 MGS-like domain IC785_04085 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IC785_04090 PF00117 Glutamine amidotransferase class-I IC785_04090 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IC785_04105 PF01985 CRS1 / YhbY (CRM) domain IC785_04110 PF01728 FtsJ-like methyltransferase IC785_04115 PF01434 Peptidase family M41 IC785_04115 PF06480 FtsH Extracellular IC785_04115 PF17862 AAA+ lid domain IC785_04115 PF00004 ATPase family associated with various cellular activities (AAA) IC785_04120 PF00809 Pterin binding enzyme IC785_04140 PF16655 PhoD-like phosphatase, N-terminal domain IC785_04140 PF09423 PhoD-like phosphatase IC785_04155 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IC785_04155 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IC785_04170 PF00083 Sugar (and other) transporter IC785_04175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IC785_04175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IC785_04180 PF01266 FAD dependent oxidoreductase IC785_04180 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IC785_04185 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain IC785_04185 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain IC785_04190 PF00781 Diacylglycerol kinase catalytic domain IC785_04195 PF00149 Calcineurin-like phosphoesterase IC785_04200 PF00166 Chaperonin 10 Kd subunit IC785_04205 PF00118 TCP-1/cpn60 chaperonin family IC785_04210 PF01219 Prokaryotic diacylglycerol kinase IC785_04215 PF00753 Metallo-beta-lactamase superfamily IC785_04220 PF03009 Glycerophosphoryl diester phosphodiesterase family IC785_04225 PF00873 AcrB/AcrD/AcrF family IC785_04235 PF01435 Peptidase family M48 IC785_04240 PF01464 Transglycosylase SLT domain IC785_04245 PF01171 PP-loop family IC785_04255 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC785_04255 PF01464 Transglycosylase SLT domain IC785_04260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IC785_04260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IC785_04265 PF03449 Transcription elongation factor, N-terminal IC785_04265 PF01272 Transcription elongation factor, GreA/GreB, C-term IC785_04280 PF07859 alpha/beta hydrolase fold IC785_04285 PF08240 Alcohol dehydrogenase GroES-like domain IC785_04285 PF00107 Zinc-binding dehydrogenase IC785_04320 PF00743 Flavin-binding monooxygenase-like IC785_04330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_04330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_04330 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_04335 PF00378 Enoyl-CoA hydratase/isomerase IC785_04340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC785_04340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC785_04340 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IC785_04345 PF00108 Thiolase, N-terminal domain IC785_04345 PF02803 Thiolase, C-terminal domain IC785_04350 PF02515 CoA-transferase family III IC785_04355 PF09339 IclR helix-turn-helix domain IC785_04370 PF13533 Biotin-lipoyl like IC785_04375 PF00873 AcrB/AcrD/AcrF family IC785_04380 PF00873 AcrB/AcrD/AcrF family IC785_04385 PF02321 Outer membrane efflux protein IC785_04390 PF00975 Thioesterase domain IC785_04390 PF00550 Phosphopantetheine attachment site IC785_04390 PF00668 Condensation domain IC785_04390 PF13193 AMP-binding enzyme C-terminal domain IC785_04390 PF00501 AMP-binding enzyme IC785_04410 PF09857 Putative toxin of bacterial toxin-antitoxin pair IC785_04475 PF00440 Bacterial regulatory proteins, tetR family IC785_04480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC785_04485 PF00364 Biotin-requiring enzyme IC785_04485 PF00561 alpha/beta hydrolase fold IC785_04490 PF00364 Biotin-requiring enzyme IC785_04490 PF00561 alpha/beta hydrolase fold IC785_04495 PF00561 alpha/beta hydrolase fold IC785_04505 PF03466 LysR substrate binding domain IC785_04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_04510 PF05199 GMC oxidoreductase IC785_04510 PF00732 GMC oxidoreductase IC785_04515 PF00171 Aldehyde dehydrogenase family IC785_04535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC785_04535 PF00529 HlyD membrane-fusion protein of T1SS IC785_04540 PF00873 AcrB/AcrD/AcrF family IC785_04545 PF00881 Nitroreductase family IC785_04560 PF02595 Glycerate kinase family IC785_04565 PF00384 Molybdopterin oxidoreductase IC785_04570 PF02634 FdhD/NarQ family IC785_04575 PF06803 Protein of unknown function (DUF1232) IC785_04580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IC785_04580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IC785_04580 PF11890 Domain of unknown function (DUF3410) IC785_04585 PF00152 tRNA synthetases class II (D, K and N) IC785_04595 PF18073 Rubredoxin metal binding domain IC785_04600 PF01235 Sodium:alanine symporter family IC785_04605 PF00324 Amino acid permease IC785_04615 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IC785_04615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IC785_04620 PF01678 Diaminopimelate epimerase IC785_04630 PF01810 LysE type translocator IC785_04635 PF02899 Phage integrase, N-terminal SAM-like domain IC785_04635 PF00589 Phage integrase family IC785_04640 PF01012 Electron transfer flavoprotein domain IC785_04645 PF00766 Electron transfer flavoprotein FAD-binding domain IC785_04645 PF01012 Electron transfer flavoprotein domain IC785_04655 PF00753 Metallo-beta-lactamase superfamily IC785_04655 PF16123 Hydroxyacylglutathione hydrolase C-terminus IC785_04660 PF03989 DNA gyrase C-terminal domain, beta-propeller IC785_04660 PF00521 DNA gyrase/topoisomerase IV, subunit A IC785_04665 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IC785_04675 PF00535 Glycosyl transferase family 2 IC785_04695 PF13533 Biotin-lipoyl like IC785_04705 PF00266 Aminotransferase class-V IC785_04720 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IC785_04730 PF12704 MacB-like periplasmic core domain IC785_04730 PF02687 FtsX-like permease family IC785_04735 PF00005 ABC transporter IC785_04740 PF03772 Competence protein IC785_04740 PF13567 Domain of unknown function (DUF4131) IC785_04740 PF00753 Metallo-beta-lactamase superfamily IC785_04750 PF06965 Na+/H+ antiporter 1 IC785_04750 PF01343 Peptidase family S49 IC785_04755 PF12697 Alpha/beta hydrolase family IC785_04760 PF00551 Formyl transferase IC785_04765 PF00586 AIR synthase related protein, N-terminal domain IC785_04765 PF02769 AIR synthase related protein, C-terminal domain IC785_04770 PF01594 AI-2E family transporter IC785_04775 PF08299 Bacterial dnaA protein helix-turn-helix IC785_04775 PF00308 Bacterial dnaA protein IC785_04775 PF11638 DnaA N-terminal domain IC785_04805 PF00588 SpoU rRNA Methylase family IC785_04805 PF08032 RNA 2'-O ribose methyltransferase substrate binding IC785_04810 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IC785_04820 PF00691 OmpA family IC785_04825 PF07676 WD40-like Beta Propeller Repeat IC785_04825 PF04052 TolB amino-terminal domain IC785_04835 PF02472 Biopolymer transport protein ExbD/TolR IC785_04840 PF01618 MotA/TolQ/ExbB proton channel family IC785_04845 PF03061 Thioesterase superfamily IC785_04850 PF07687 Peptidase dimerisation domain IC785_04850 PF01546 Peptidase family M20/M25/M40 IC785_04855 PF05496 Holliday junction DNA helicase RuvB P-loop domain IC785_04855 PF17864 RuvB AAA lid domain IC785_04855 PF05491 RuvB C-terminal winged helix domain IC785_04860 PF01330 RuvA N terminal domain IC785_04860 PF07499 RuvA, C-terminal domain IC785_04870 PF01966 HD domain IC785_04875 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IC785_04875 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IC785_04875 PF02769 AIR synthase related protein, C-terminal domain IC785_04880 PF07690 Major Facilitator Superfamily IC785_04895 PF01784 NIF3 (NGG1p interacting factor 3) IC785_04900 PF00378 Enoyl-CoA hydratase/isomerase IC785_04905 PF00293 NUDIX domain IC785_04905 PF01467 Cytidylyltransferase-like IC785_04920 PF00578 AhpC/TSA family IC785_04925 PF06508 Queuosine biosynthesis protein QueC IC785_04935 PF06508 Queuosine biosynthesis protein QueC IC785_04940 PF04055 Radical SAM superfamily IC785_04945 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IC785_04945 PF14602 Hexapeptide repeat of succinyl-transferase IC785_04945 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_04955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_04955 PF03466 LysR substrate binding domain IC785_04960 PF12857 TOBE-like domain IC785_04960 PF00005 ABC transporter IC785_04965 PF00528 Binding-protein-dependent transport system inner membrane component IC785_04970 PF00528 Binding-protein-dependent transport system inner membrane component IC785_04985 PF01063 Amino-transferase class IV IC785_04990 PF02618 YceG-like family IC785_04995 PF02223 Thymidylate kinase IC785_05005 PF02910 Fumarate reductase flavoprotein C-term IC785_05005 PF00890 FAD binding domain IC785_05010 PF13180 PDZ domain IC785_05020 PF00679 Elongation factor G C-terminus IC785_05020 PF00009 Elongation factor Tu GTP binding domain IC785_05020 PF06421 GTP-binding protein LepA C-terminus IC785_05020 PF03144 Elongation factor Tu domain 2 IC785_05025 PF10502 Signal peptidase, peptidase S26 IC785_05035 PF14622 Ribonuclease-III-like IC785_05035 PF00035 Double-stranded RNA binding motif IC785_05040 PF01926 50S ribosome-binding GTPase IC785_05040 PF07650 KH domain IC785_05050 PF02565 Recombination protein O C terminal IC785_05050 PF11967 Recombination protein O N terminal IC785_05055 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IC785_05060 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IC785_05065 PF00106 short chain dehydrogenase IC785_05090 PF00155 Aminotransferase class I and II IC785_05100 PF17151 Periplasmic sensor domain IC785_05100 PF00990 Diguanylate cyclase, GGDEF domain IC785_05110 PF00990 Diguanylate cyclase, GGDEF domain IC785_05115 PF02151 UvrB/uvrC motif IC785_05115 PF12344 Ultra-violet resistance protein B IC785_05115 PF00271 Helicase conserved C-terminal domain IC785_05115 PF04851 Type III restriction enzyme, res subunit IC785_05115 PF17757 UvrB interaction domain IC785_05130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IC785_05130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IC785_05145 PF01926 50S ribosome-binding GTPase IC785_05145 PF01018 GTP1/OBG IC785_05150 PF01472 PUA domain IC785_05150 PF00696 Amino acid kinase family IC785_05160 PF07759 Protein of unknown function (DUF1615) IC785_05165 PF01207 Dihydrouridine synthase (Dus) IC785_05170 PF03060 Nitronate monooxygenase IC785_05185 PF02350 UDP-N-acetylglucosamine 2-epimerase IC785_05215 PF00875 DNA photolyase IC785_05215 PF03441 FAD binding domain of DNA photolyase IC785_05220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC785_05225 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_05230 PF00768 D-alanyl-D-alanine carboxypeptidase IC785_05230 PF07943 Penicillin-binding protein 5, C-terminal domain IC785_05240 PF03971 Monomeric isocitrate dehydrogenase IC785_05245 PF00849 RNA pseudouridylate synthase IC785_05250 PF00180 Isocitrate/isopropylmalate dehydrogenase IC785_05345 PF03796 DnaB-like helicase C terminal domain IC785_05345 PF00772 DnaB-like helicase N terminal domain IC785_05385 PF00149 Calcineurin-like phosphoesterase IC785_05435 PF03592 Terminase small subunit IC785_05435 PF10668 Phage terminase small subunit IC785_05525 PF13936 Helix-turn-helix domain IC785_05525 PF00665 Integrase core domain IC785_05580 PF03050 Transposase IS66 family IC785_05580 PF13817 IS66 C-terminal element IC785_05580 PF13007 Transposase C of IS166 homeodomain IC785_05580 PF13005 zinc-finger binding domain of transposase IS66 IC785_05720 PF03796 DnaB-like helicase C terminal domain IC785_05720 PF00772 DnaB-like helicase N terminal domain IC785_05760 PF00149 Calcineurin-like phosphoesterase IC785_05895 PF13936 Helix-turn-helix domain IC785_05895 PF00665 Integrase core domain IC785_05920 PF01464 Transglycosylase SLT domain IC785_05920 PF10145 Phage-related minor tail protein IC785_05920 PF01551 Peptidase family M23 IC785_06015 PF06779 Uncharacterised MFS-type transporter YbfB IC785_06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_06020 PF03466 LysR substrate binding domain IC785_06025 PF00375 Sodium:dicarboxylate symporter family IC785_06030 PF02567 Phenazine biosynthesis-like protein IC785_06035 PF00675 Insulinase (Peptidase family M16) IC785_06035 PF05193 Peptidase M16 inactive domain IC785_06060 PF02581 Thiamine monophosphate synthase IC785_06065 PF00202 Aminotransferase class-III IC785_06075 PF00849 RNA pseudouridylate synthase IC785_06080 PF00271 Helicase conserved C-terminal domain IC785_06080 PF18337 RapA N-terminal Tudor like domain IC785_06080 PF12137 RNA polymerase recycling family C-terminal IC785_06080 PF00176 SNF2 family N-terminal domain IC785_06080 PF18339 RapA N-terminal Tudor like domain 1 IC785_06090 PF00440 Bacterial regulatory proteins, tetR family IC785_06095 PF00970 Oxidoreductase FAD-binding domain IC785_06095 PF00111 2Fe-2S iron-sulfur cluster binding domain IC785_06095 PF00175 Oxidoreductase NAD-binding domain IC785_06100 PF00487 Fatty acid desaturase IC785_06120 PF00202 Aminotransferase class-III IC785_06125 PF00282 Pyridoxal-dependent decarboxylase conserved domain IC785_06130 PF00171 Aldehyde dehydrogenase family IC785_06135 PF01037 Lrp/AsnC ligand binding domain IC785_06140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC785_06140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC785_06140 PF00205 Thiamine pyrophosphate enzyme, central domain IC785_06145 PF00324 Amino acid permease IC785_06150 PF12849 PBP superfamily domain IC785_06155 PF00528 Binding-protein-dependent transport system inner membrane component IC785_06160 PF00528 Binding-protein-dependent transport system inner membrane component IC785_06165 PF00005 ABC transporter IC785_06170 PF08496 Peptidase family S49 N-terminal IC785_06170 PF01343 Peptidase family S49 IC785_06185 PF09997 Predicted membrane protein (DUF2238) IC785_06190 PF00206 Lyase IC785_06190 PF08328 Adenylosuccinate lyase C-terminal IC785_06195 PF04356 Protein of unknown function (DUF489) IC785_06205 PF00293 NUDIX domain IC785_06210 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_06215 PF00768 D-alanyl-D-alanine carboxypeptidase IC785_06215 PF07943 Penicillin-binding protein 5, C-terminal domain IC785_06230 PF01975 Survival protein SurE IC785_06235 PF01551 Peptidase family M23 IC785_06235 PF01476 LysM domain IC785_06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_06240 PF03466 LysR substrate binding domain IC785_06245 PF13654 AAA domain IC785_06245 PF05362 Lon protease (S16) C-terminal proteolytic domain IC785_06250 PF07690 Major Facilitator Superfamily IC785_06255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC785_06260 PF13593 SBF-like CPA transporter family (DUF4137) IC785_06265 PF01197 Ribosomal protein L31 IC785_06270 PF12792 CSS motif domain associated with EAL IC785_06270 PF00563 EAL domain IC785_06280 PF04055 Radical SAM superfamily IC785_06285 PF09285 Elongation factor P, C-terminal IC785_06285 PF08207 Elongation factor P (EF-P) KOW-like domain IC785_06285 PF01132 Elongation factor P (EF-P) OB domain IC785_06290 PF02554 Carbon starvation protein CstA IC785_06290 PF13722 5TM C-terminal transporter carbon starvation CstA IC785_06295 PF04328 Selenoprotein, putative IC785_06305 PF02705 K+ potassium transporter IC785_06325 PF07690 Major Facilitator Superfamily IC785_06335 PF02417 Chromate transporter IC785_06340 PF09828 Chromate resistance exported protein IC785_06345 PF03466 LysR substrate binding domain IC785_06345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_06365 PF00883 Cytosol aminopeptidase family, catalytic domain IC785_06365 PF02789 Cytosol aminopeptidase family, N-terminal domain IC785_06370 PF02423 Ornithine cyclodeaminase/mu-crystallin family IC785_06375 PF00291 Pyridoxal-phosphate dependent enzyme IC785_06380 PF08348 YheO-like PAS domain IC785_06380 PF13309 HTH domain IC785_06385 PF01757 Acyltransferase family IC785_06390 PF13936 Helix-turn-helix domain IC785_06390 PF00665 Integrase core domain IC785_06395 PF01757 Acyltransferase family IC785_06405 PF17954 Quercetinase C-terminal cupin domain IC785_06405 PF02678 Pirin IC785_06415 PF01208 Uroporphyrinogen decarboxylase (URO-D) IC785_06420 PF05675 Protein of unknown function (DUF817) IC785_06435 PF00144 Beta-lactamase IC785_06440 PF01227 GTP cyclohydrolase I IC785_06445 PF00111 2Fe-2S iron-sulfur cluster binding domain IC785_06445 PF01799 [2Fe-2S] binding domain IC785_06445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IC785_06445 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IC785_06450 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IC785_06450 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IC785_06460 PF01713 Smr domain IC785_06465 PF00218 Indole-3-glycerol phosphate synthase IC785_06470 PF00591 Glycosyl transferase family, a/b domain IC785_06470 PF02885 Glycosyl transferase family, helical bundle domain IC785_06475 PF00117 Glutamine amidotransferase class-I IC785_06485 PF00854 POT family IC785_06490 PF03951 Glutamine synthetase, beta-Grasp domain IC785_06490 PF00120 Glutamine synthetase, catalytic domain IC785_06495 PF04345 Chorismate lyase IC785_06500 PF01040 UbiA prenyltransferase family IC785_06535 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IC785_06535 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IC785_06540 PF01784 NIF3 (NGG1p interacting factor 3) IC785_06545 PF13180 PDZ domain IC785_06550 PF12627 Probable RNA and SrmB- binding site of polymerase A IC785_06550 PF01743 Poly A polymerase head domain IC785_06555 PF03949 Malic enzyme, NAD binding domain IC785_06555 PF00390 Malic enzyme, N-terminal domain IC785_06555 PF01515 Phosphate acetyl/butaryl transferase IC785_06565 PF13936 Helix-turn-helix domain IC785_06565 PF00665 Integrase core domain IC785_06575 PF04452 RNA methyltransferase IC785_06580 PF02219 Methylenetetrahydrofolate reductase IC785_06585 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IC785_06585 PF05221 S-adenosyl-L-homocysteine hydrolase IC785_06600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_06600 PF09317 Domain of unknown function (DUF1974) IC785_06600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_06605 PF04055 Radical SAM superfamily IC785_06610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC785_06610 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_06620 PF07690 Major Facilitator Superfamily IC785_06630 PF00557 Metallopeptidase family M24 IC785_06635 PF00318 Ribosomal protein S2 IC785_06640 PF00889 Elongation factor TS IC785_06650 PF12833 Helix-turn-helix domain IC785_06670 PF05036 Sporulation related domain IC785_06670 PF03330 Lytic transglycolase IC785_06675 PF13406 Transglycosylase SLT domain IC785_06680 PF01098 Cell cycle protein IC785_06690 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IC785_06690 PF14489 QueF-like protein IC785_06695 PF01061 ABC-2 type transporter IC785_06700 PF00005 ABC transporter IC785_06705 PF00589 Phage integrase family IC785_06795 PF03796 DnaB-like helicase C terminal domain IC785_06795 PF00772 DnaB-like helicase N terminal domain IC785_06840 PF00149 Calcineurin-like phosphoesterase IC785_06980 PF00533 BRCA1 C Terminus (BRCT) domain IC785_06980 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IC785_06980 PF01653 NAD-dependent DNA ligase adenylation domain IC785_06980 PF12826 Helix-hairpin-helix motif IC785_06980 PF03120 NAD-dependent DNA ligase OB-fold domain IC785_07020 PF00464 Serine hydroxymethyltransferase IC785_07025 PF02321 Outer membrane efflux protein IC785_07030 PF00873 AcrB/AcrD/AcrF family IC785_07035 PF13533 Biotin-lipoyl like IC785_07040 PF03466 LysR substrate binding domain IC785_07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_07045 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC785_07050 PF00528 Binding-protein-dependent transport system inner membrane component IC785_07055 PF00528 Binding-protein-dependent transport system inner membrane component IC785_07060 PF00005 ABC transporter IC785_07065 PF00893 Small Multidrug Resistance protein IC785_07070 PF00037 4Fe-4S binding domain IC785_07075 PF16325 Peptidase family U32 C-terminal domain IC785_07075 PF01136 Peptidase family U32 IC785_07080 PF00155 Aminotransferase class I and II IC785_07080 PF00392 Bacterial regulatory proteins, gntR family IC785_07085 PF02567 Phenazine biosynthesis-like protein IC785_07090 PF00970 Oxidoreductase FAD-binding domain IC785_07090 PF00175 Oxidoreductase NAD-binding domain IC785_07095 PF01980 tRNA-methyltransferase O IC785_07095 PF18389 TrmO C-terminal domain IC785_07105 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IC785_07105 PF00437 Type II/IV secretion system protein IC785_07115 PF00072 Response regulator receiver domain IC785_07115 PF00486 Transcriptional regulatory protein, C terminal IC785_07120 PF08521 Two-component sensor kinase N-terminal IC785_07120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_07120 PF00512 His Kinase A (phospho-acceptor) domain IC785_07140 PF00905 Penicillin binding protein transpeptidase domain IC785_07140 PF00912 Transglycosylase IC785_07140 PF14814 Bifunctional transglycosylase second domain IC785_07145 PF01513 ATP-NAD kinase IC785_07150 PF07023 Protein of unknown function (DUF1315) IC785_07155 PF02885 Glycosyl transferase family, helical bundle domain IC785_07155 PF00591 Glycosyl transferase family, a/b domain IC785_07160 PF00375 Sodium:dicarboxylate symporter family IC785_07165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_07165 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_07165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_07180 PF01817 Chorismate mutase type II IC785_07180 PF00800 Prephenate dehydratase IC785_07180 PF01842 ACT domain IC785_07185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IC785_07195 PF03781 Sulfatase-modifying factor enzyme 1 IC785_07200 PF01546 Peptidase family M20/M25/M40 IC785_07200 PF07687 Peptidase dimerisation domain IC785_07205 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain IC785_07205 PF01137 RNA 3'-terminal phosphate cyclase IC785_07220 PF01139 tRNA-splicing ligase RtcB IC785_07225 PF00753 Metallo-beta-lactamase superfamily IC785_07230 PF00158 Sigma-54 interaction domain IC785_07230 PF06956 Regulator of RNA terminal phosphate cyclase IC785_07240 PF03883 Peroxide stress protein YaaA IC785_07245 PF05690 Thiazole biosynthesis protein ThiG IC785_07255 PF04241 Protein of unknown function (DUF423) IC785_07260 PF00140 Sigma-70 factor, region 1.2 IC785_07260 PF04542 Sigma-70 region 2 IC785_07260 PF04545 Sigma-70, region 4 IC785_07270 PF00313 'Cold-shock' DNA-binding domain IC785_07275 PF00271 Helicase conserved C-terminal domain IC785_07275 PF00270 DEAD/DEAH box helicase IC785_07285 PF00881 Nitroreductase family IC785_07290 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IC785_07290 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IC785_07310 PF01180 Dihydroorotate dehydrogenase IC785_07320 PF00156 Phosphoribosyl transferase domain IC785_07335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IC785_07335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IC785_07340 PF01435 Peptidase family M48 IC785_07345 PF09424 Yqey-like protein IC785_07350 PF01165 Ribosomal protein S21 IC785_07355 PF00814 Glycoprotease family IC785_07375 PF03793 PASTA domain IC785_07375 PF00069 Protein kinase domain IC785_07415 PF03466 LysR substrate binding domain IC785_07415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_07420 PF00202 Aminotransferase class-III IC785_07425 PF00171 Aldehyde dehydrogenase family IC785_07430 PF00324 Amino acid permease IC785_07480 PF00857 Isochorismatase family IC785_07485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_07485 PF03466 LysR substrate binding domain IC785_07495 PF00743 Flavin-binding monooxygenase-like IC785_07505 PF00561 alpha/beta hydrolase fold IC785_07515 PF01370 NAD dependent epimerase/dehydratase family IC785_07520 PF12833 Helix-turn-helix domain IC785_07520 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC785_07525 PF03616 Sodium/glutamate symporter IC785_07530 PF00999 Sodium/hydrogen exchanger family IC785_07530 PF02254 TrkA-N domain IC785_07610 PF00440 Bacterial regulatory proteins, tetR family IC785_07620 PF12833 Helix-turn-helix domain IC785_07620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IC785_07620 PF02805 Metal binding domain of Ada IC785_07620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IC785_07630 PF00155 Aminotransferase class I and II IC785_07635 PF02080 TrkA-C domain IC785_07635 PF06826 Predicted Permease Membrane Region IC785_07650 PF03466 LysR substrate binding domain IC785_07650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_07660 PF04403 Paraquat-inducible protein A IC785_07665 PF02470 MlaD protein IC785_07675 PF00576 HIUase/Transthyretin family IC785_07685 PF00486 Transcriptional regulatory protein, C terminal IC785_07685 PF00072 Response regulator receiver domain IC785_07690 PF00512 His Kinase A (phospho-acceptor) domain IC785_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_07690 PF00672 HAMP domain IC785_07730 PF00512 His Kinase A (phospho-acceptor) domain IC785_07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_07730 PF08521 Two-component sensor kinase N-terminal IC785_07735 PF00072 Response regulator receiver domain IC785_07735 PF00486 Transcriptional regulatory protein, C terminal IC785_07750 PF00892 EamA-like transporter family IC785_07755 PF00107 Zinc-binding dehydrogenase IC785_07755 PF08240 Alcohol dehydrogenase GroES-like domain IC785_07760 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC785_07765 PF05853 beta-keto acid cleavage enzyme IC785_07770 PF07690 Major Facilitator Superfamily IC785_07785 PF03601 Conserved hypothetical protein 698 IC785_07810 PF07995 Glucose / Sorbosone dehydrogenase IC785_07830 PF00375 Sodium:dicarboxylate symporter family IC785_07840 PF16123 Hydroxyacylglutathione hydrolase C-terminus IC785_07840 PF00753 Metallo-beta-lactamase superfamily IC785_07845 PF00528 Binding-protein-dependent transport system inner membrane component IC785_07850 PF09383 NIL domain IC785_07850 PF00005 ABC transporter IC785_07855 PF03180 NLPA lipoprotein IC785_07860 PF02844 Phosphoribosylglycinamide synthetase, N domain IC785_07860 PF02843 Phosphoribosylglycinamide synthetase, C domain IC785_07860 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IC785_07865 PF02142 MGS-like domain IC785_07865 PF01808 AICARFT/IMPCHase bienzyme IC785_07870 PF02954 Bacterial regulatory protein, Fis family IC785_07900 PF14403 Circularly permuted ATP-grasp type 2 IC785_07910 PF08379 Bacterial transglutaminase-like N-terminal region IC785_07910 PF01841 Transglutaminase-like superfamily IC785_07920 PF01168 Alanine racemase, N-terminal domain IC785_07920 PF00842 Alanine racemase, C-terminal domain IC785_07925 PF03796 DnaB-like helicase C terminal domain IC785_07925 PF00772 DnaB-like helicase N terminal domain IC785_07930 PF01281 Ribosomal protein L9, N-terminal domain IC785_07930 PF03948 Ribosomal protein L9, C-terminal domain IC785_07935 PF01084 Ribosomal protein S18 IC785_07940 PF01250 Ribosomal protein S6 IC785_07945 PF01040 UbiA prenyltransferase family IC785_07950 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IC785_07955 PF00510 Cytochrome c oxidase subunit III IC785_07960 PF00115 Cytochrome C and Quinol oxidase polypeptide I IC785_07965 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IC785_07965 PF06481 COX Aromatic Rich Motif IC785_07975 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IC785_07975 PF02896 PEP-utilising enzyme, TIM barrel domain IC785_07975 PF00391 PEP-utilising enzyme, mobile domain IC785_07980 PF03618 Kinase/pyrophosphorylase IC785_07990 PF14883 Hypothetical glycosyl hydrolase family 13 IC785_07990 PF01522 Polysaccharide deacetylase IC785_07995 PF00535 Glycosyl transferase family 2 IC785_08000 PF13994 PgaD-like protein IC785_08010 PF00296 Luciferase-like monooxygenase IC785_08025 PF00472 RF-1 domain IC785_08025 PF03462 PCRF domain IC785_08030 PF17827 PrmC N-terminal domain IC785_08030 PF13847 Methyltransferase domain IC785_08035 PF00528 Binding-protein-dependent transport system inner membrane component IC785_08040 PF09084 NMT1/THI5 like IC785_08045 PF12833 Helix-turn-helix domain IC785_08050 PF00106 short chain dehydrogenase IC785_08055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_08055 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_08055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_08060 PF13193 AMP-binding enzyme C-terminal domain IC785_08060 PF00501 AMP-binding enzyme IC785_08065 PF01613 Flavin reductase like domain IC785_08070 PF00899 ThiF family IC785_08075 PF03109 ABC1 family IC785_08090 PF03814 Potassium-transporting ATPase A subunit IC785_08100 PF02669 K+-transporting ATPase, c chain IC785_08105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_08105 PF13493 Domain of unknown function (DUF4118) IC785_08105 PF02702 Osmosensitive K+ channel His kinase sensor domain IC785_08105 PF00512 His Kinase A (phospho-acceptor) domain IC785_08110 PF00072 Response regulator receiver domain IC785_08110 PF00486 Transcriptional regulatory protein, C terminal IC785_08115 PF00120 Glutamine synthetase, catalytic domain IC785_08125 PF03232 Ubiquinone biosynthesis protein COQ7 IC785_08130 PF07690 Major Facilitator Superfamily IC785_08135 PF17243 POTRA domain TamA domain 1 IC785_08135 PF07244 Surface antigen variable number repeat IC785_08135 PF01103 Surface antigen IC785_08155 PF00330 Aconitase family (aconitate hydratase) IC785_08155 PF06434 Aconitate hydratase 2 N-terminus IC785_08155 PF11791 Aconitate B N-terminal domain IC785_08165 PF00027 Cyclic nucleotide-binding domain IC785_08165 PF00520 Ion transport protein IC785_08170 PF07690 Major Facilitator Superfamily IC785_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_08180 PF03466 LysR substrate binding domain IC785_08185 PF04284 Protein of unknown function (DUF441) IC785_08195 PF00849 RNA pseudouridylate synthase IC785_08195 PF01479 S4 domain IC785_08210 PF01479 S4 domain IC785_08210 PF00849 RNA pseudouridylate synthase IC785_08215 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IC785_08220 PF08676 MutL C terminal dimerisation domain IC785_08220 PF01119 DNA mismatch repair protein, C-terminal domain IC785_08230 PF17209 Hfq protein IC785_08240 PF00881 Nitroreductase family IC785_08250 PF00149 Calcineurin-like phosphoesterase IC785_08255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IC785_08260 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IC785_08260 PF00749 tRNA synthetases class I (E and Q), catalytic domain IC785_08265 PF00117 Glutamine amidotransferase class-I IC785_08265 PF00958 GMP synthase C terminal domain IC785_08265 PF02540 NAD synthase IC785_08270 PF05985 Ethanolamine ammonia-lyase light chain (EutC) IC785_08275 PF06751 Ethanolamine ammonia lyase large subunit (EutB) IC785_08280 PF13520 Amino acid permease IC785_08285 PF00171 Aldehyde dehydrogenase family IC785_08300 PF00465 Iron-containing alcohol dehydrogenase IC785_08305 PF05970 PIF1-like helicase IC785_08305 PF14493 Helix-turn-helix domain IC785_08315 PF06445 GyrI-like small molecule binding domain IC785_08320 PF02110 Hydroxyethylthiazole kinase family IC785_08335 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IC785_08335 PF01433 Peptidase family M1 domain IC785_08335 PF11940 Domain of unknown function (DUF3458) Ig-like fold IC785_08350 PF13954 PapC N-terminal domain IC785_08350 PF13953 PapC C-terminal domain IC785_08350 PF00577 Outer membrane usher protein IC785_08365 PF02798 Glutathione S-transferase, N-terminal domain IC785_08385 PF01037 Lrp/AsnC ligand binding domain IC785_08420 PF03328 HpcH/HpaI aldolase/citrate lyase family IC785_08425 PF04183 IucA / IucC family IC785_08425 PF06276 Ferric iron reductase FhuF-like transporter IC785_08430 PF07690 Major Facilitator Superfamily IC785_08435 PF04183 IucA / IucC family IC785_08435 PF06276 Ferric iron reductase FhuF-like transporter IC785_08440 PF02423 Ornithine cyclodeaminase/mu-crystallin family IC785_08445 PF00291 Pyridoxal-phosphate dependent enzyme IC785_08455 PF00924 Mechanosensitive ion channel IC785_08500 PF16326 ABC transporter C-terminal domain IC785_08500 PF12848 ABC transporter IC785_08500 PF00005 ABC transporter IC785_08505 PF00582 Universal stress protein family IC785_08525 PF02308 MgtC family IC785_08530 PF03594 Benzoate membrane transport protein IC785_08535 PF01037 Lrp/AsnC ligand binding domain IC785_08545 PF13936 Helix-turn-helix domain IC785_08545 PF00665 Integrase core domain IC785_08555 PF00923 Transaldolase/Fructose-6-phosphate aldolase IC785_08560 PF03466 LysR substrate binding domain IC785_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_08570 PF00108 Thiolase, N-terminal domain IC785_08570 PF02803 Thiolase, C-terminal domain IC785_08580 PF01575 MaoC like domain IC785_08585 PF00144 Beta-lactamase IC785_08595 PF07690 Major Facilitator Superfamily IC785_08610 PF12169 DNA polymerase III subunits gamma and tau domain III IC785_08610 PF12170 DNA polymerase III tau subunit V interacting with alpha IC785_08610 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IC785_08615 PF04185 Phosphoesterase family IC785_08615 PF05506 Domain of unknown function (DUF756) IC785_08620 PF03061 Thioesterase superfamily IC785_08625 PF00465 Iron-containing alcohol dehydrogenase IC785_08635 PF00857 Isochorismatase family IC785_08640 PF01638 HxlR-like helix-turn-helix IC785_08650 PF01451 Low molecular weight phosphotyrosine protein phosphatase IC785_08655 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IC785_08655 PF01565 FAD binding domain IC785_08680 PF01645 Conserved region in glutamate synthase IC785_08700 PF13953 PapC C-terminal domain IC785_08700 PF00577 Outer membrane usher protein IC785_08700 PF13954 PapC N-terminal domain IC785_08720 PF12832 MFS_1 like family IC785_08730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC785_08730 PF00289 Biotin carboxylase, N-terminal domain IC785_08730 PF02785 Biotin carboxylase C-terminal domain IC785_08735 PF00364 Biotin-requiring enzyme IC785_08740 PF01220 Dehydroquinase class II IC785_08745 PF00817 impB/mucB/samB family IC785_08745 PF13438 Domain of unknown function (DUF4113) IC785_08745 PF11799 impB/mucB/samB family C-terminal domain IC785_08755 PF00005 ABC transporter IC785_08760 PF00072 Response regulator receiver domain IC785_08760 PF00486 Transcriptional regulatory protein, C terminal IC785_08770 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_08770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IC785_08770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IC785_08770 PF04324 BFD-like [2Fe-2S] binding domain IC785_08770 PF18267 Rubredoxin NAD+ reductase C-terminal domain IC785_08770 PF13806 Rieske-like [2Fe-2S] domain IC785_08775 PF04324 BFD-like [2Fe-2S] binding domain IC785_08775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IC785_08775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IC785_08775 PF18267 Rubredoxin NAD+ reductase C-terminal domain IC785_08775 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_08785 PF12804 MobA-like NTP transferase domain IC785_08790 PF01568 Molydopterin dinucleotide binding domain IC785_08790 PF00384 Molybdopterin oxidoreductase IC785_08790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IC785_08795 PF04055 Radical SAM superfamily IC785_08795 PF06463 Molybdenum Cofactor Synthesis C IC785_08805 PF02391 MoaE protein IC785_08810 PF01967 MoaC family IC785_08810 PF00994 Probable molybdopterin binding domain IC785_08815 PF00994 Probable molybdopterin binding domain IC785_08815 PF03454 MoeA C-terminal region (domain IV) IC785_08815 PF03453 MoeA N-terminal region (domain I and II) IC785_08820 PF01638 HxlR-like helix-turn-helix IC785_08830 PF00892 EamA-like transporter family IC785_08850 PF02635 DsrE/DsrF-like family IC785_08855 PF16363 GDP-mannose 4,6 dehydratase IC785_08860 PF10415 Fumarase C C-terminus IC785_08860 PF00206 Lyase IC785_08880 PF01266 FAD dependent oxidoreductase IC785_08890 PF02542 YgbB family IC785_08900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IC785_08900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IC785_08905 PF00440 Bacterial regulatory proteins, tetR family IC785_08910 PF00158 Sigma-54 interaction domain IC785_08910 PF00072 Response regulator receiver domain IC785_08910 PF02954 Bacterial regulatory protein, Fis family IC785_08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_08915 PF00512 His Kinase A (phospho-acceptor) domain IC785_08915 PF00989 PAS fold IC785_08925 PF04055 Radical SAM superfamily IC785_08925 PF00919 Uncharacterized protein family UPF0004 IC785_08925 PF18693 TRAM domain IC785_08930 PF00696 Amino acid kinase family IC785_08935 PF01765 Ribosome recycling factor IC785_08940 PF01255 Putative undecaprenyl diphosphate synthase IC785_08950 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IC785_08950 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IC785_08950 PF13288 DXP reductoisomerase C-terminal domain IC785_08955 PF02163 Peptidase family M50 IC785_08955 PF17820 PDZ domain IC785_08955 PF13180 PDZ domain IC785_08960 PF01103 Surface antigen IC785_08960 PF07244 Surface antigen variable number repeat IC785_08970 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_08970 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IC785_08975 PF07977 FabA-like domain IC785_08980 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_08980 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IC785_08995 PF02631 RecX family IC785_09000 PF00154 recA bacterial DNA recombination protein IC785_09005 PF01479 S4 domain IC785_09010 PF13419 Haloacid dehalogenase-like hydrolase IC785_09025 PF01037 Lrp/AsnC ligand binding domain IC785_09030 PF00266 Aminotransferase class-V IC785_09035 PF00324 Amino acid permease IC785_09050 PF01740 STAS domain IC785_09050 PF00916 Sulfate permease family IC785_09055 PF07995 Glucose / Sorbosone dehydrogenase IC785_09070 PF13007 Transposase C of IS166 homeodomain IC785_09070 PF13817 IS66 C-terminal element IC785_09070 PF03050 Transposase IS66 family IC785_09070 PF13005 zinc-finger binding domain of transposase IS66 IC785_09105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IC785_09105 PF02378 Phosphotransferase system, EIIC IC785_09110 PF00294 pfkB family carbohydrate kinase IC785_09115 PF02896 PEP-utilising enzyme, TIM barrel domain IC785_09115 PF05524 PEP-utilising enzyme, N-terminal IC785_09115 PF00391 PEP-utilising enzyme, mobile domain IC785_09115 PF00381 PTS HPr component phosphorylation site IC785_09115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IC785_09140 PF05525 Branched-chain amino acid transport protein IC785_09145 PF00557 Metallopeptidase family M24 IC785_09150 PF03466 LysR substrate binding domain IC785_09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_09160 PF00462 Glutaredoxin IC785_09165 PF00202 Aminotransferase class-III IC785_09170 PF00571 CBS domain IC785_09195 PF02881 SRP54-type protein, helical bundle domain IC785_09195 PF00448 SRP54-type protein, GTPase domain IC785_09220 PF08173 Membrane bound YbgT-like protein IC785_09225 PF02322 Cytochrome bd terminal oxidase subunit II IC785_09230 PF01654 Cytochrome bd terminal oxidase subunit I IC785_09240 PF07290 Protein of unknown function (DUF1449) IC785_09250 PF00294 pfkB family carbohydrate kinase IC785_09255 PF00593 TonB dependent receptor IC785_09255 PF07715 TonB-dependent Receptor Plug Domain IC785_09260 PF08367 Peptidase M16C associated IC785_09260 PF05193 Peptidase M16 inactive domain IC785_09260 PF00675 Insulinase (Peptidase family M16) IC785_09265 PF02253 Phospholipase A1 IC785_09270 PF02386 Cation transport protein IC785_09275 PF02080 TrkA-C domain IC785_09275 PF02254 TrkA-N domain IC785_09280 PF00291 Pyridoxal-phosphate dependent enzyme IC785_09280 PF00585 C-terminal regulatory domain of Threonine dehydratase IC785_09285 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IC785_09300 PF02774 Semialdehyde dehydrogenase, dimerisation domain IC785_09300 PF01118 Semialdehyde dehydrogenase, NAD binding domain IC785_09310 PF02617 ATP-dependent Clp protease adaptor protein ClpS IC785_09315 PF00004 ATPase family associated with various cellular activities (AAA) IC785_09315 PF10431 C-terminal, D2-small domain, of ClpB protein IC785_09315 PF02861 Clp amino terminal domain, pathogenicity island component IC785_09315 PF17871 AAA lid domain IC785_09315 PF07724 AAA domain (Cdc48 subfamily) IC785_09320 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IC785_09325 PF00793 DAHP synthetase I family IC785_09340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC785_09340 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_09370 PF06418 CTP synthase N-terminus IC785_09370 PF00117 Glutamine amidotransferase class-I IC785_09375 PF00793 DAHP synthetase I family IC785_09380 PF03952 Enolase, N-terminal domain IC785_09380 PF00113 Enolase, C-terminal TIM barrel domain IC785_09385 PF04239 Protein of unknown function (DUF421) IC785_09395 PF04977 Septum formation initiator IC785_09400 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IC785_09405 PF01144 Coenzyme A transferase IC785_09410 PF01144 Coenzyme A transferase IC785_09415 PF00108 Thiolase, N-terminal domain IC785_09415 PF02803 Thiolase, C-terminal domain IC785_09420 PF10397 Adenylosuccinate lyase C-terminus IC785_09420 PF00206 Lyase IC785_09425 PF00561 alpha/beta hydrolase fold IC785_09430 PF07690 Major Facilitator Superfamily IC785_09435 PF02627 Carboxymuconolactone decarboxylase family IC785_09440 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IC785_09440 PF00775 Dioxygenase IC785_09445 PF00775 Dioxygenase IC785_09450 PF01487 Type I 3-dehydroquinase IC785_09455 PF05048 Periplasmic copper-binding protein (NosD) IC785_09460 PF04966 Carbohydrate-selective porin, OprB family IC785_09465 PF01011 PQQ enzyme repeat IC785_09465 PF13360 PQQ-like domain IC785_09475 PF04143 Sulphur transport IC785_09485 PF00753 Metallo-beta-lactamase superfamily IC785_09490 PF09339 IclR helix-turn-helix domain IC785_09490 PF01614 Bacterial transcriptional regulator IC785_09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_09495 PF03466 LysR substrate binding domain IC785_09500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_09500 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_09500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_09515 PF00106 short chain dehydrogenase IC785_09525 PF07690 Major Facilitator Superfamily IC785_09535 PF01425 Amidase IC785_09540 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC785_09555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC785_09555 PF00355 Rieske [2Fe-2S] domain IC785_09570 PF00175 Oxidoreductase NAD-binding domain IC785_09570 PF00111 2Fe-2S iron-sulfur cluster binding domain IC785_09575 PF01613 Flavin reductase like domain IC785_09580 PF02311 AraC-like ligand binding domain IC785_09580 PF12833 Helix-turn-helix domain IC785_09585 PF07833 Copper amine oxidase N-terminal domain IC785_09585 PF02728 Copper amine oxidase, N3 domain IC785_09585 PF01179 Copper amine oxidase, enzyme domain IC785_09585 PF02727 Copper amine oxidase, N2 domain IC785_09595 PF00732 GMC oxidoreductase IC785_09595 PF05199 GMC oxidoreductase IC785_09600 PF00171 Aldehyde dehydrogenase family IC785_09605 PF12146 Serine aminopeptidase, S33 IC785_09610 PF02803 Thiolase, C-terminal domain IC785_09610 PF00108 Thiolase, N-terminal domain IC785_09615 PF01144 Coenzyme A transferase IC785_09620 PF01144 Coenzyme A transferase IC785_09625 PF04444 Catechol dioxygenase N terminus IC785_09625 PF00775 Dioxygenase IC785_09630 PF02426 Muconolactone delta-isomerase IC785_09635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IC785_09635 PF13378 Enolase C-terminal domain-like IC785_09640 PF03466 LysR substrate binding domain IC785_09640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_09655 PF00561 alpha/beta hydrolase fold IC785_09660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC785_09660 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_09665 PF00106 short chain dehydrogenase IC785_09670 PF01872 RibD C-terminal domain IC785_09680 PF09278 MerR, DNA binding IC785_09680 PF00376 MerR family regulatory protein IC785_09690 PF12706 Beta-lactamase superfamily domain IC785_09695 PF08359 YsiA-like protein, C-terminal region IC785_09695 PF00440 Bacterial regulatory proteins, tetR family IC785_09765 PF07690 Major Facilitator Superfamily IC785_09780 PF00392 Bacterial regulatory proteins, gntR family IC785_09780 PF07702 UTRA domain IC785_09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_09785 PF03466 LysR substrate binding domain IC785_09790 PF07883 Cupin domain IC785_09795 PF01494 FAD binding domain IC785_09800 PF13417 Glutathione S-transferase, N-terminal domain IC785_09805 PF01557 Fumarylacetoacetate (FAA) hydrolase family IC785_09810 PF07690 Major Facilitator Superfamily IC785_09820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC785_09820 PF00529 HlyD membrane-fusion protein of T1SS IC785_09835 PF07732 Multicopper oxidase IC785_09835 PF07731 Multicopper oxidase IC785_09840 PF00264 Common central domain of tyrosinase IC785_09850 PF01032 FecCD transport family IC785_09855 PF00005 ABC transporter IC785_09875 PF14572 Phosphoribosyl synthetase-associated domain IC785_09875 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IC785_09880 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IC785_09905 PF01425 Amidase IC785_09910 PF13533 Biotin-lipoyl like IC785_09915 PF07690 Major Facilitator Superfamily IC785_09940 PF04607 Region found in RelA / SpoT proteins IC785_09940 PF13291 ACT domain IC785_09940 PF02824 TGS domain IC785_09995 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC785_10000 PF13545 Crp-like helix-turn-helix domain IC785_10000 PF00027 Cyclic nucleotide-binding domain IC785_10005 PF00884 Sulfatase IC785_10010 PF07715 TonB-dependent Receptor Plug Domain IC785_10010 PF00593 TonB dependent receptor IC785_10015 PF00248 Aldo/keto reductase family IC785_10020 PF00296 Luciferase-like monooxygenase IC785_10025 PF00593 TonB dependent receptor IC785_10025 PF07715 TonB-dependent Receptor Plug Domain IC785_10035 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC785_10045 PF02472 Biopolymer transport protein ExbD/TolR IC785_10050 PF01618 MotA/TolQ/ExbB proton channel family IC785_10055 PF03544 Gram-negative bacterial TonB protein C-terminal IC785_10060 PF00005 ABC transporter IC785_10065 PF00528 Binding-protein-dependent transport system inner membrane component IC785_10070 PF00296 Luciferase-like monooxygenase IC785_10075 PF00593 TonB dependent receptor IC785_10075 PF07715 TonB-dependent Receptor Plug Domain IC785_10085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IC785_10090 PF02472 Biopolymer transport protein ExbD/TolR IC785_10095 PF01618 MotA/TolQ/ExbB proton channel family IC785_10100 PF03544 Gram-negative bacterial TonB protein C-terminal IC785_10105 PF00296 Luciferase-like monooxygenase IC785_10110 PF09084 NMT1/THI5 like IC785_10115 PF00528 Binding-protein-dependent transport system inner membrane component IC785_10120 PF00528 Binding-protein-dependent transport system inner membrane component IC785_10125 PF00005 ABC transporter IC785_10130 PF02416 mttA/Hcf106 family IC785_10135 PF02416 mttA/Hcf106 family IC785_10140 PF00902 Sec-independent protein translocase protein (TatC) IC785_10145 PF00158 Sigma-54 interaction domain IC785_10150 PF00296 Luciferase-like monooxygenase IC785_10160 PF00593 TonB dependent receptor IC785_10160 PF07715 TonB-dependent Receptor Plug Domain IC785_10185 PF00005 ABC transporter IC785_10185 PF00664 ABC transporter transmembrane region IC785_10195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_10195 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_10195 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC785_10200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC785_10200 PF00005 ABC transporter IC785_10205 PF00528 Binding-protein-dependent transport system inner membrane component IC785_10205 PF12911 N-terminal TM domain of oligopeptide transport permease C IC785_10210 PF00528 Binding-protein-dependent transport system inner membrane component IC785_10215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IC785_10220 PF00296 Luciferase-like monooxygenase IC785_10240 PF16970 Type-1 fimbrial protein, A IC785_10245 PF02753 Pili assembly chaperone PapD, C-terminal domain IC785_10245 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IC785_10250 PF00577 Outer membrane usher protein IC785_10250 PF13954 PapC N-terminal domain IC785_10250 PF13953 PapC C-terminal domain IC785_10255 PF00419 Fimbrial protein IC785_10265 PF00107 Zinc-binding dehydrogenase IC785_10265 PF08240 Alcohol dehydrogenase GroES-like domain IC785_10275 PF00199 Catalase IC785_10285 PF02548 Ketopantoate hydroxymethyltransferase IC785_10290 PF13091 PLD-like domain IC785_10300 PF02702 Osmosensitive K+ channel His kinase sensor domain IC785_10300 PF00512 His Kinase A (phospho-acceptor) domain IC785_10300 PF13493 Domain of unknown function (DUF4118) IC785_10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_10305 PF00486 Transcriptional regulatory protein, C terminal IC785_10305 PF00072 Response regulator receiver domain IC785_10310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC785_10310 PF00529 HlyD membrane-fusion protein of T1SS IC785_10315 PF00873 AcrB/AcrD/AcrF family IC785_10330 PF01244 Membrane dipeptidase (Peptidase family M19) IC785_10335 PF04055 Radical SAM superfamily IC785_10335 PF13186 Iron-sulfur cluster-binding domain IC785_10340 PF05402 Coenzyme PQQ synthesis protein D (PqqD) IC785_10345 PF03070 TENA/THI-4/PQQC family IC785_10350 PF12706 Beta-lactamase superfamily domain IC785_10355 PF08042 PqqA family IC785_10360 PF13090 Polyphosphate kinase C-terminal domain 2 IC785_10360 PF13089 Polyphosphate kinase N-terminal domain IC785_10360 PF02503 Polyphosphate kinase middle domain IC785_10360 PF17941 Polyphosphate kinase C-terminal domain 1 IC785_10365 PF00149 Calcineurin-like phosphoesterase IC785_10375 PF00593 TonB dependent receptor IC785_10375 PF07715 TonB-dependent Receptor Plug Domain IC785_10385 PF00550 Phosphopantetheine attachment site IC785_10385 PF00857 Isochorismatase family IC785_10390 PF00501 AMP-binding enzyme IC785_10390 PF13193 AMP-binding enzyme C-terminal domain IC785_10395 PF00425 chorismate binding enzyme IC785_10400 PF00106 short chain dehydrogenase IC785_10410 PF03621 MbtH-like protein IC785_10415 PF00550 Phosphopantetheine attachment site IC785_10415 PF13193 AMP-binding enzyme C-terminal domain IC785_10415 PF00501 AMP-binding enzyme IC785_10415 PF00668 Condensation domain IC785_10415 PF00975 Thioesterase domain IC785_10420 PF05977 Transmembrane secretion effector IC785_10425 PF17837 4'-phosphopantetheinyl transferase N-terminal domain IC785_10425 PF01648 4'-phosphopantetheinyl transferase superfamily IC785_10440 PF03459 TOBE domain IC785_10440 PF00005 ABC transporter IC785_10445 PF00528 Binding-protein-dependent transport system inner membrane component IC785_10455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_10455 PF03459 TOBE domain IC785_10460 PF00355 Rieske [2Fe-2S] domain IC785_10460 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC785_10465 PF00866 Ring hydroxylating beta subunit IC785_10470 PF00970 Oxidoreductase FAD-binding domain IC785_10470 PF00175 Oxidoreductase NAD-binding domain IC785_10470 PF00111 2Fe-2S iron-sulfur cluster binding domain IC785_10475 PF14525 AraC-binding-like domain IC785_10475 PF12833 Helix-turn-helix domain IC785_10485 PF01613 Flavin reductase like domain IC785_10500 PF01738 Dienelactone hydrolase family IC785_10510 PF07690 Major Facilitator Superfamily IC785_10515 PF06719 AraC-type transcriptional regulator N-terminus IC785_10515 PF12833 Helix-turn-helix domain IC785_10530 PF00753 Metallo-beta-lactamase superfamily IC785_10560 PF07690 Major Facilitator Superfamily IC785_10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_10585 PF03466 LysR substrate binding domain IC785_10590 PF01144 Coenzyme A transferase IC785_10595 PF01144 Coenzyme A transferase IC785_10600 PF02667 Short chain fatty acid transporter IC785_10605 PF02803 Thiolase, C-terminal domain IC785_10605 PF00108 Thiolase, N-terminal domain IC785_10610 PF03466 LysR substrate binding domain IC785_10610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_10615 PF03466 LysR substrate binding domain IC785_10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_10630 PF10415 Fumarase C C-terminus IC785_10630 PF00206 Lyase IC785_10635 PF07715 TonB-dependent Receptor Plug Domain IC785_10635 PF00593 TonB dependent receptor IC785_10640 PF00083 Sugar (and other) transporter IC785_10650 PF12833 Helix-turn-helix domain IC785_10650 PF06445 GyrI-like small molecule binding domain IC785_10665 PF01925 Sulfite exporter TauE/SafE IC785_10670 PF00753 Metallo-beta-lactamase superfamily IC785_10670 PF04273 Putative phosphatase (DUF442) IC785_10675 PF00753 Metallo-beta-lactamase superfamily IC785_10675 PF04273 Putative phosphatase (DUF442) IC785_10680 PF00072 Response regulator receiver domain IC785_10680 PF00158 Sigma-54 interaction domain IC785_10680 PF02954 Bacterial regulatory protein, Fis family IC785_10685 PF01062 Bestrophin, RFP-TM, chloride channel IC785_10690 PF08240 Alcohol dehydrogenase GroES-like domain IC785_10690 PF00107 Zinc-binding dehydrogenase IC785_10695 PF00106 short chain dehydrogenase IC785_10700 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_10700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC785_10705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IC785_10705 PF00364 Biotin-requiring enzyme IC785_10705 PF02817 e3 binding domain IC785_10710 PF02780 Transketolase, C-terminal domain IC785_10710 PF02779 Transketolase, pyrimidine binding domain IC785_10715 PF00676 Dehydrogenase E1 component IC785_10720 PF04055 Radical SAM superfamily IC785_10735 PF00990 Diguanylate cyclase, GGDEF domain IC785_10735 PF05230 MASE2 domain IC785_10740 PF01264 Chorismate synthase IC785_10745 PF05175 Methyltransferase small domain IC785_10750 PF00291 Pyridoxal-phosphate dependent enzyme IC785_10760 PF00004 ATPase family associated with various cellular activities (AAA) IC785_10760 PF17862 AAA+ lid domain IC785_10760 PF01434 Peptidase family M41 IC785_10770 PF05166 YcgL domain IC785_10790 PF01612 3'-5' exonuclease IC785_10790 PF00570 HRDC domain IC785_10795 PF02132 RecR protein IC785_10795 PF13662 Toprim domain IC785_10800 PF02575 YbaB/EbfC DNA-binding family IC785_10810 PF01053 Cys/Met metabolism PLP-dependent enzyme IC785_10820 PF08241 Methyltransferase domain IC785_10830 PF13737 Transposase DDE domain IC785_10850 PF01230 HIT domain IC785_10885 PF00005 ABC transporter IC785_10890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC785_10900 PF02684 Lipid-A-disaccharide synthetase IC785_10905 PF07715 TonB-dependent Receptor Plug Domain IC785_10905 PF00593 TonB dependent receptor IC785_10925 PF01925 Sulfite exporter TauE/SafE IC785_10930 PF00793 DAHP synthetase I family IC785_10935 PF02654 Cobalamin-5-phosphate synthase IC785_10945 PF00300 Histidine phosphatase superfamily (branch 1) IC785_10950 PF02277 Phosphoribosyltransferase IC785_10955 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IC785_10965 PF13419 Haloacid dehalogenase-like hydrolase IC785_10970 PF04073 Aminoacyl-tRNA editing domain IC785_10980 PF03109 ABC1 family IC785_10985 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_10985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_10985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_10990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_10990 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_10990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_10995 PF00487 Fatty acid desaturase IC785_11000 PF12833 Helix-turn-helix domain IC785_11000 PF12852 Cupin IC785_11005 PF09312 SurA N-terminal domain IC785_11005 PF00639 PPIC-type PPIASE domain IC785_11010 PF00216 Bacterial DNA-binding protein IC785_11025 PF02082 Transcriptional regulator IC785_11035 PF01592 NifU-like N terminal domain IC785_11040 PF01521 Iron-sulphur cluster biosynthesis IC785_11045 PF07743 HSCB C-terminal oligomerisation domain IC785_11045 PF00226 DnaJ domain IC785_11050 PF00012 Hsp70 protein IC785_11055 PF00111 2Fe-2S iron-sulfur cluster binding domain IC785_11060 PF00211 Adenylate and Guanylate cyclase catalytic domain IC785_11090 PF03737 Aldolase/RraA IC785_11095 PF13460 NAD(P)H-binding IC785_11100 PF01649 Ribosomal protein S20 IC785_11110 PF00459 Inositol monophosphatase family IC785_11125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC785_11125 PF00005 ABC transporter IC785_11130 PF00528 Binding-protein-dependent transport system inner membrane component IC785_11135 PF00528 Binding-protein-dependent transport system inner membrane component IC785_11160 PF03544 Gram-negative bacterial TonB protein C-terminal IC785_11165 PF01618 MotA/TolQ/ExbB proton channel family IC785_11170 PF02472 Biopolymer transport protein ExbD/TolR IC785_11175 PF02472 Biopolymer transport protein ExbD/TolR IC785_11185 PF01274 Malate synthase IC785_11305 PF04860 Phage portal protein IC785_11390 PF00772 DnaB-like helicase N terminal domain IC785_11390 PF03796 DnaB-like helicase C terminal domain IC785_11405 PF00717 Peptidase S24-like IC785_11405 PF01726 LexA DNA binding domain IC785_11445 PF02899 Phage integrase, N-terminal SAM-like domain IC785_11445 PF00589 Phage integrase family IC785_11450 PF03969 AFG1-like ATPase IC785_11460 PF00743 Flavin-binding monooxygenase-like IC785_11465 PF03956 Lysine exporter LysO IC785_11470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IC785_11480 PF00216 Bacterial DNA-binding protein IC785_11485 PF00575 S1 RNA binding domain IC785_11490 PF02224 Cytidylate kinase IC785_11500 PF14437 MafB19-like deaminase IC785_11510 PF03167 Uracil DNA glycosylase superfamily IC785_11520 PF03934 Type II secretion system (T2SS), protein K IC785_11525 PF07963 Prokaryotic N-terminal methylation motif IC785_11525 PF11612 Type II secretion system (T2SS), protein J IC785_11530 PF07963 Prokaryotic N-terminal methylation motif IC785_11530 PF02501 Type II secretion system (T2SS), protein I IC785_11545 PF01026 TatD related DNase IC785_11555 PF09115 DNA polymerase III, delta subunit, C terminal IC785_11560 PF02348 Cytidylyltransferase IC785_11570 PF00005 ABC transporter IC785_11570 PF00664 ABC transporter transmembrane region IC785_11580 PF01618 MotA/TolQ/ExbB proton channel family IC785_11585 PF02195 ParB-like nuclease domain IC785_11585 PF17762 HTH domain found in ParB protein IC785_11590 PF13614 AAA domain IC785_11595 PF02527 rRNA small subunit methyltransferase G IC785_11600 PF00483 Nucleotidyl transferase IC785_11605 PF01636 Phosphotransferase enzyme family IC785_11610 PF03968 OstA-like protein IC785_11610 PF04453 LPS transport system D IC785_11615 PF00639 PPIC-type PPIASE domain IC785_11615 PF09312 SurA N-terminal domain IC785_11620 PF01116 Fructose-bisphosphate aldolase class-II IC785_11630 PF00162 Phosphoglycerate kinase IC785_11640 PF02545 Maf-like protein IC785_11645 PF08007 Cupin superfamily protein IC785_11660 PF00375 Sodium:dicarboxylate symporter family IC785_11665 PF06912 Protein of unknown function (DUF1275) IC785_11670 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IC785_11675 PF00005 ABC transporter IC785_11675 PF00664 ABC transporter transmembrane region IC785_11685 PF12833 Helix-turn-helix domain IC785_11685 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC785_11690 PF01597 Glycine cleavage H-protein IC785_11695 PF02146 Sir2 family IC785_11700 PF00474 Sodium:solute symporter family IC785_11705 PF01037 Lrp/AsnC ligand binding domain IC785_11710 PF14850 DNA-binding domain of Proline dehydrogenase IC785_11710 PF00171 Aldehyde dehydrogenase family IC785_11710 PF01619 Proline dehydrogenase IC785_11710 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IC785_11715 PF04229 GrpB protein IC785_11720 PF05958 tRNA (Uracil-5-)-methyltransferase IC785_11730 PF09992 Phosphodiester glycosidase IC785_11740 PF04264 YceI-like domain IC785_11755 PF00456 Transketolase, thiamine diphosphate binding domain IC785_11755 PF02779 Transketolase, pyrimidine binding domain IC785_11755 PF02780 Transketolase, C-terminal domain IC785_11760 PF02772 S-adenosylmethionine synthetase, central domain IC785_11760 PF02773 S-adenosylmethionine synthetase, C-terminal domain IC785_11760 PF00438 S-adenosylmethionine synthetase, N-terminal domain IC785_11790 PF02075 Crossover junction endodeoxyribonuclease RuvC IC785_11795 PF01256 Carbohydrate kinase IC785_11795 PF03853 YjeF-related protein N-terminus IC785_11800 PF08331 Domain of unknown function (DUF1730) IC785_11805 PF06968 Biotin and Thiamin Synthesis associated domain IC785_11805 PF04055 Radical SAM superfamily IC785_11820 PF16970 Type-1 fimbrial protein, A IC785_11825 PF02753 Pili assembly chaperone PapD, C-terminal domain IC785_11825 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain IC785_11830 PF00577 Outer membrane usher protein IC785_11830 PF13954 PapC N-terminal domain IC785_11830 PF13953 PapC C-terminal domain IC785_11845 PF00892 EamA-like transporter family IC785_11855 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IC785_11865 PF03466 LysR substrate binding domain IC785_11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_11870 PF13936 Helix-turn-helix domain IC785_11870 PF00665 Integrase core domain IC785_11890 PF00196 Bacterial regulatory proteins, luxR family IC785_11890 PF03472 Autoinducer binding domain IC785_11900 PF00440 Bacterial regulatory proteins, tetR family IC785_11910 PF01709 Transcriptional regulator IC785_11915 PF01037 Lrp/AsnC ligand binding domain IC785_11925 PF00005 ABC transporter IC785_11930 PF00528 Binding-protein-dependent transport system inner membrane component IC785_11935 PF00528 Binding-protein-dependent transport system inner membrane component IC785_11950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC785_11950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_11960 PF00296 Luciferase-like monooxygenase IC785_11965 PF03180 NLPA lipoprotein IC785_11970 PF03180 NLPA lipoprotein IC785_11975 PF00005 ABC transporter IC785_11975 PF09383 NIL domain IC785_11980 PF00528 Binding-protein-dependent transport system inner membrane component IC785_11985 PF01926 50S ribosome-binding GTPase IC785_11985 PF06071 Protein of unknown function (DUF933) IC785_12010 PF03591 AzlC protein IC785_12015 PF05437 Branched-chain amino acid transport protein (AzlD) IC785_12025 PF02222 ATP-grasp domain IC785_12030 PF08335 GlnD PII-uridylyltransferase IC785_12030 PF01966 HD domain IC785_12030 PF01909 Nucleotidyltransferase domain IC785_12035 PF00155 Aminotransferase class I and II IC785_12045 PF02311 AraC-like ligand binding domain IC785_12045 PF12833 Helix-turn-helix domain IC785_12050 PF00255 Glutathione peroxidase IC785_12055 PF01641 SelR domain IC785_12060 PF00155 Aminotransferase class I and II IC785_12065 PF00375 Sodium:dicarboxylate symporter family IC785_12070 PF00710 Asparaginase, N-terminal IC785_12070 PF17763 Glutaminase/Asparaginase C-terminal domain IC785_12075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IC785_12075 PF14579 Helix-hairpin-helix motif IC785_12075 PF02811 PHP domain IC785_12075 PF07733 Bacterial DNA polymerase III alpha NTPase domain IC785_12075 PF01336 OB-fold nucleic acid binding domain IC785_12080 PF00588 SpoU rRNA Methylase family IC785_12085 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_12100 PF13192 Thioredoxin domain IC785_12100 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_12115 PF03466 LysR substrate binding domain IC785_12115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_12120 PF03358 NADPH-dependent FMN reductase IC785_12125 PF01758 Sodium Bile acid symporter family IC785_12130 PF01022 Bacterial regulatory protein, arsR family IC785_12135 PF03960 ArsC family IC785_12145 PF13382 Adenine deaminase C-terminal domain IC785_12145 PF01979 Amidohydrolase family IC785_12165 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IC785_12170 PF01177 Asp/Glu/Hydantoin racemase IC785_12175 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IC785_12180 PF00528 Binding-protein-dependent transport system inner membrane component IC785_12185 PF00005 ABC transporter IC785_12190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IC785_12200 PF00083 Sugar (and other) transporter IC785_12205 PF00296 Luciferase-like monooxygenase IC785_12210 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC785_12210 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_12210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_12220 PF01654 Cytochrome bd terminal oxidase subunit I IC785_12225 PF02322 Cytochrome bd terminal oxidase subunit II IC785_12235 PF00392 Bacterial regulatory proteins, gntR family IC785_12235 PF00155 Aminotransferase class I and II IC785_12240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_12240 PF03466 LysR substrate binding domain IC785_12255 PF00698 Acyl transferase domain IC785_12260 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG IC785_12270 PF01039 Carboxyl transferase domain IC785_12275 PF06857 Malonate decarboxylase delta subunit (MdcD) IC785_12280 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IC785_12285 PF16957 Malonate decarboxylase, alpha subunit, transporter IC785_12300 PF00392 Bacterial regulatory proteins, gntR family IC785_12300 PF00155 Aminotransferase class I and II IC785_12305 PF04172 LrgB-like family IC785_12310 PF03788 LrgA family IC785_12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_12315 PF03466 LysR substrate binding domain IC785_12320 PF02798 Glutathione S-transferase, N-terminal domain IC785_12320 PF14834 Glutathione S-transferase, C-terminal domain IC785_12325 PF02798 Glutathione S-transferase, N-terminal domain IC785_12330 PF03466 LysR substrate binding domain IC785_12330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_12340 PF00581 Rhodanese-like domain IC785_12345 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_12355 PF00266 Aminotransferase class-V IC785_12360 PF01810 LysE type translocator IC785_12365 PF03466 LysR substrate binding domain IC785_12365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_12370 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC785_12375 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC785_12380 PF00005 ABC transporter IC785_12385 PF00528 Binding-protein-dependent transport system inner membrane component IC785_12390 PF00528 Binding-protein-dependent transport system inner membrane component IC785_12405 PF07690 Major Facilitator Superfamily IC785_12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_12410 PF03466 LysR substrate binding domain IC785_12420 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IC785_12425 PF00072 Response regulator receiver domain IC785_12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_12430 PF00072 Response regulator receiver domain IC785_12430 PF00512 His Kinase A (phospho-acceptor) domain IC785_12430 PF09308 LuxQ, periplasmic IC785_12440 PF01037 Lrp/AsnC ligand binding domain IC785_12440 PF13404 AsnC-type helix-turn-helix domain IC785_12450 PF00717 Peptidase S24-like IC785_12475 PF18011 C-terminal domain found in long catalases IC785_12475 PF00199 Catalase IC785_12475 PF06628 Catalase-related immune-responsive IC785_12485 PF18146 Damage-inducible protein CinA KH domain IC785_12485 PF02464 Competence-damaged protein IC785_12485 PF00994 Probable molybdopterin binding domain IC785_12515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_12515 PF03466 LysR substrate binding domain IC785_12535 PF00501 AMP-binding enzyme IC785_12535 PF13193 AMP-binding enzyme C-terminal domain IC785_12540 PF00440 Bacterial regulatory proteins, tetR family IC785_12545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_12545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_12545 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_12550 PF01039 Carboxyl transferase domain IC785_12555 PF00378 Enoyl-CoA hydratase/isomerase IC785_12560 PF18140 Propionyl-coenzyme A carboxylase BT domain IC785_12560 PF00289 Biotin carboxylase, N-terminal domain IC785_12560 PF02785 Biotin carboxylase C-terminal domain IC785_12560 PF00364 Biotin-requiring enzyme IC785_12560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC785_12565 PF00682 HMGL-like IC785_12570 PF03466 LysR substrate binding domain IC785_12570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_12585 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_12585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_12585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_12585 PF12806 Acetyl-CoA dehydrogenase C-terminal like IC785_12595 PF07690 Major Facilitator Superfamily IC785_12605 PF01144 Coenzyme A transferase IC785_12610 PF01144 Coenzyme A transferase IC785_12615 PF07690 Major Facilitator Superfamily IC785_12620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_12620 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_12620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_12625 PF00378 Enoyl-CoA hydratase/isomerase IC785_12635 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IC785_12635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC785_12635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC785_12640 PF00108 Thiolase, N-terminal domain IC785_12640 PF02803 Thiolase, C-terminal domain IC785_12645 PF09339 IclR helix-turn-helix domain IC785_12650 PF07690 Major Facilitator Superfamily IC785_12660 PF03060 Nitronate monooxygenase IC785_12665 PF00378 Enoyl-CoA hydratase/isomerase IC785_12670 PF09339 IclR helix-turn-helix domain IC785_12675 PF02515 CoA-transferase family III IC785_12680 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_12680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_12680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_12685 PF07690 Major Facilitator Superfamily IC785_12690 PF13419 Haloacid dehalogenase-like hydrolase IC785_12695 PF00266 Aminotransferase class-V IC785_12700 PF01266 FAD dependent oxidoreductase IC785_12705 PF00528 Binding-protein-dependent transport system inner membrane component IC785_12710 PF00005 ABC transporter IC785_12710 PF08402 TOBE domain IC785_12720 PF00392 Bacterial regulatory proteins, gntR family IC785_12720 PF07702 UTRA domain IC785_12725 PF01168 Alanine racemase, N-terminal domain IC785_12725 PF00842 Alanine racemase, C-terminal domain IC785_12730 PF01494 FAD binding domain IC785_12735 PF01614 Bacterial transcriptional regulator IC785_12735 PF09339 IclR helix-turn-helix domain IC785_12740 PF02525 Flavodoxin-like fold IC785_12745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_12745 PF03466 LysR substrate binding domain IC785_12760 PF01292 Prokaryotic cytochrome b561 IC785_12765 PF00199 Catalase IC785_12770 PF13520 Amino acid permease IC785_12775 PF01636 Phosphotransferase enzyme family IC785_12785 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC785_12785 PF12833 Helix-turn-helix domain IC785_12790 PF00202 Aminotransferase class-III IC785_12795 PF16295 Tetracyclin repressor-like, C-terminal domain IC785_12795 PF00440 Bacterial regulatory proteins, tetR family IC785_12835 PF00182 Chitinase class I IC785_12855 PF00300 Histidine phosphatase superfamily (branch 1) IC785_12865 PF03061 Thioesterase superfamily IC785_12870 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_12875 PF07848 PaaX-like protein IC785_12875 PF08223 PaaX-like protein C-terminal domain IC785_12880 PF00501 AMP-binding enzyme IC785_12880 PF14535 AMP-binding enzyme C-terminal domain IC785_12890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC785_12890 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain IC785_12890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC785_12895 PF00378 Enoyl-CoA hydratase/isomerase IC785_12900 PF00378 Enoyl-CoA hydratase/isomerase IC785_12905 PF00970 Oxidoreductase FAD-binding domain IC785_12905 PF00111 2Fe-2S iron-sulfur cluster binding domain IC785_12905 PF00175 Oxidoreductase NAD-binding domain IC785_12910 PF01883 Iron-sulfur cluster assembly protein IC785_12915 PF05138 Phenylacetic acid catabolic protein IC785_12920 PF06243 Phenylacetic acid degradation B IC785_12925 PF05138 Phenylacetic acid catabolic protein IC785_12930 PF00171 Aldehyde dehydrogenase family IC785_12930 PF01575 MaoC like domain IC785_12935 PF03313 Serine dehydratase alpha chain IC785_12935 PF03315 Serine dehydratase beta chain IC785_12945 PF00376 MerR family regulatory protein IC785_12945 PF09278 MerR, DNA binding IC785_12955 PF02677 Epoxyqueuosine reductase QueH IC785_12960 PF00155 Aminotransferase class I and II IC785_12960 PF00392 Bacterial regulatory proteins, gntR family IC785_12975 PF07690 Major Facilitator Superfamily IC785_12980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IC785_12985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_12985 PF03466 LysR substrate binding domain IC785_13005 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IC785_13010 PF06812 ImpA, N-terminal, type VI secretion system IC785_13015 PF07724 AAA domain (Cdc48 subfamily) IC785_13015 PF10431 C-terminal, D2-small domain, of ClpB protein IC785_13015 PF00004 ATPase family associated with various cellular activities (AAA) IC785_13015 PF17871 AAA lid domain IC785_13025 PF01389 OmpA-like transmembrane domain IC785_13025 PF00691 OmpA family IC785_13035 PF14331 ImcF-related N-terminal domain IC785_13035 PF06761 Intracellular multiplication and human macrophage-killing IC785_13035 PF06744 Type VI secretion protein IcmF C-terminal IC785_13050 PF05947 Type VI secretion system, TssF IC785_13065 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IC785_13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_13080 PF03466 LysR substrate binding domain IC785_13085 PF07690 Major Facilitator Superfamily IC785_13100 PF00005 ABC transporter IC785_13105 PF00497 Bacterial extracellular solute-binding proteins, family 3 IC785_13110 PF01425 Amidase IC785_13115 PF08753 NikR C terminal nickel binding domain IC785_13115 PF01402 Ribbon-helix-helix protein, copG family IC785_13130 PF01638 HxlR-like helix-turn-helix IC785_13135 PF02525 Flavodoxin-like fold IC785_13140 PF02785 Biotin carboxylase C-terminal domain IC785_13140 PF00289 Biotin carboxylase, N-terminal domain IC785_13140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC785_13155 PF08240 Alcohol dehydrogenase GroES-like domain IC785_13155 PF00107 Zinc-binding dehydrogenase IC785_13155 PF13823 Alcohol dehydrogenase GroES-associated IC785_13205 PF00654 Voltage gated chloride channel IC785_13210 PF00289 Biotin carboxylase, N-terminal domain IC785_13210 PF00364 Biotin-requiring enzyme IC785_13210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IC785_13210 PF02785 Biotin carboxylase C-terminal domain IC785_13220 PF07286 Protein of unknown function (DUF1445) IC785_13225 PF03746 LamB/YcsF family IC785_13230 PF01566 Natural resistance-associated macrophage protein IC785_13235 PF03466 LysR substrate binding domain IC785_13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_13245 PF08281 Sigma-70, region 4 IC785_13245 PF04542 Sigma-70 region 2 IC785_13255 PF05114 Protein of unknown function (DUF692) IC785_13285 PF00892 EamA-like transporter family IC785_13300 PF06629 MltA-interacting protein MipA IC785_13305 PF00202 Aminotransferase class-III IC785_13350 PF03527 RHS protein IC785_13350 PF05593 RHS Repeat IC785_13430 PF16295 Tetracyclin repressor-like, C-terminal domain IC785_13430 PF00440 Bacterial regulatory proteins, tetR family IC785_13435 PF00313 'Cold-shock' DNA-binding domain IC785_13440 PF00117 Glutamine amidotransferase class-I IC785_13450 PF01037 Lrp/AsnC ligand binding domain IC785_13450 PF13404 AsnC-type helix-turn-helix domain IC785_13455 PF06865 Pyrimidine/purine nucleoside phosphorylase IC785_13470 PF13302 Acetyltransferase (GNAT) domain IC785_13475 PF07715 TonB-dependent Receptor Plug Domain IC785_13495 PF07690 Major Facilitator Superfamily IC785_13510 PF01979 Amidohydrolase family IC785_13515 PF03466 LysR substrate binding domain IC785_13515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_13525 PF01654 Cytochrome bd terminal oxidase subunit I IC785_13530 PF02322 Cytochrome bd terminal oxidase subunit II IC785_13540 PF02649 Type I GTP cyclohydrolase folE2 IC785_13550 PF01979 Amidohydrolase family IC785_13570 PF00563 EAL domain IC785_13570 PF03707 Bacterial signalling protein N terminal repeat IC785_13570 PF00990 Diguanylate cyclase, GGDEF domain IC785_13590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_13590 PF03466 LysR substrate binding domain IC785_13595 PF00488 MutS domain V IC785_13595 PF05190 MutS family domain IV IC785_13595 PF01624 MutS domain I IC785_13595 PF05192 MutS domain III IC785_13595 PF05188 MutS domain II IC785_13605 PF11953 Domain of unknown function (DUF3470) IC785_13605 PF00037 4Fe-4S binding domain IC785_13615 PF01596 O-methyltransferase IC785_13625 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_13630 PF01205 Uncharacterized protein family UPF0029 IC785_13635 PF13533 Biotin-lipoyl like IC785_13635 PF13533 Biotin-lipoyl like IC785_13640 PF00005 ABC transporter IC785_13640 PF00664 ABC transporter transmembrane region IC785_13640 PF03412 Peptidase C39 family IC785_13645 PF02321 Outer membrane efflux protein IC785_13650 PF12399 Branched-chain amino acid ATP-binding cassette transporter IC785_13650 PF00005 ABC transporter IC785_13655 PF03968 OstA-like protein IC785_13670 PF00571 CBS domain IC785_13670 PF01380 SIS domain IC785_13675 PF01406 tRNA synthetases class I (C) catalytic domain IC785_13675 PF09190 DALR domain IC785_13695 PF01638 HxlR-like helix-turn-helix IC785_13700 PF07690 Major Facilitator Superfamily IC785_13805 PF10124 Mu-like prophage major head subunit gpT IC785_13825 PF04233 Phage Mu protein F like protein IC785_13830 PF06074 Protein of unknown function (DUF935) IC785_13840 PF03237 Terminase-like family IC785_13845 PF11985 Protein of unknown function (DUF3486) IC785_13875 PF10502 Signal peptidase, peptidase S26 IC785_13940 PF00216 Bacterial DNA-binding protein IC785_13990 PF00313 'Cold-shock' DNA-binding domain IC785_13995 PF01810 LysE type translocator IC785_14030 PF13742 OB-fold nucleic acid binding domain IC785_14030 PF02601 Exonuclease VII, large subunit IC785_14065 PF09278 MerR, DNA binding IC785_14065 PF00376 MerR family regulatory protein IC785_14070 PF00403 Heavy-metal-associated domain IC785_14080 PF02954 Bacterial regulatory protein, Fis family IC785_14080 PF06505 Activator of aromatic catabolism IC785_14080 PF02830 V4R domain IC785_14080 PF00158 Sigma-54 interaction domain IC785_14090 PF06099 Phenol hydroxylase subunit IC785_14100 PF02406 MmoB/DmpM family IC785_14105 PF02332 Methane/Phenol/Toluene Hydroxylase IC785_14105 PF04945 YHS domain IC785_14115 PF00111 2Fe-2S iron-sulfur cluster binding domain IC785_14115 PF00970 Oxidoreductase FAD-binding domain IC785_14115 PF00175 Oxidoreductase NAD-binding domain IC785_14125 PF03466 LysR substrate binding domain IC785_14125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_14135 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC785_14135 PF00355 Rieske [2Fe-2S] domain IC785_14140 PF00866 Ring hydroxylating beta subunit IC785_14145 PF00970 Oxidoreductase FAD-binding domain IC785_14145 PF00111 2Fe-2S iron-sulfur cluster binding domain IC785_14145 PF00175 Oxidoreductase NAD-binding domain IC785_14150 PF00106 short chain dehydrogenase IC785_14155 PF03594 Benzoate membrane transport protein IC785_14160 PF07690 Major Facilitator Superfamily IC785_14170 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IC785_14170 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IC785_14175 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IC785_14175 PF00271 Helicase conserved C-terminal domain IC785_14175 PF00270 DEAD/DEAH box helicase IC785_14175 PF11898 Domain of unknown function (DUF3418) IC785_14175 PF04408 Helicase associated domain (HA2) IC785_14180 PF10417 C-terminal domain of 1-Cys peroxiredoxin IC785_14180 PF00578 AhpC/TSA family IC785_14190 PF00487 Fatty acid desaturase IC785_14210 PF13192 Thioredoxin domain IC785_14210 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_14220 PF00043 Glutathione S-transferase, C-terminal domain IC785_14220 PF02798 Glutathione S-transferase, N-terminal domain IC785_14230 PF02390 Putative methyltransferase IC785_14235 PF00043 Glutathione S-transferase, C-terminal domain IC785_14235 PF13417 Glutathione S-transferase, N-terminal domain IC785_14245 PF00691 OmpA family IC785_14250 PF01979 Amidohydrolase family IC785_14255 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IC785_14255 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IC785_14265 PF01170 Putative RNA methylase family UPF0020 IC785_14265 PF02926 THUMP domain IC785_14265 PF10672 S-adenosylmethionine-dependent methyltransferase IC785_14280 PF07724 AAA domain (Cdc48 subfamily) IC785_14280 PF10431 C-terminal, D2-small domain, of ClpB protein IC785_14280 PF02861 Clp amino terminal domain, pathogenicity island component IC785_14280 PF00004 ATPase family associated with various cellular activities (AAA) IC785_14280 PF17871 AAA lid domain IC785_14295 PF02566 OsmC-like protein IC785_14300 PF13545 Crp-like helix-turn-helix domain IC785_14300 PF00027 Cyclic nucleotide-binding domain IC785_14305 PF00248 Aldo/keto reductase family IC785_14320 PF00709 Adenylosuccinate synthetase IC785_14325 PF13393 Histidyl-tRNA synthetase IC785_14335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IC785_14335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IC785_14340 PF02272 DHHA1 domain IC785_14340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IC785_14340 PF01411 tRNA synthetases class II (A) IC785_14345 PF01842 ACT domain IC785_14345 PF00696 Amino acid kinase family IC785_14345 PF13840 ACT domain IC785_14350 PF02599 Global regulator protein family IC785_14355 PF01351 Ribonuclease HII IC785_14365 PF01292 Prokaryotic cytochrome b561 IC785_14370 PF00962 Adenosine/AMP deaminase IC785_14375 PF00860 Permease family IC785_14385 PF00743 Flavin-binding monooxygenase-like IC785_14390 PF00106 short chain dehydrogenase IC785_14400 PF17954 Quercetinase C-terminal cupin domain IC785_14400 PF02678 Pirin IC785_14405 PF00440 Bacterial regulatory proteins, tetR family IC785_14405 PF17932 Tetracyclin repressor-like, C-terminal domain IC785_14415 PF00106 short chain dehydrogenase IC785_14420 PF00743 Flavin-binding monooxygenase-like IC785_14425 PF04072 Leucine carboxyl methyltransferase IC785_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_14430 PF03466 LysR substrate binding domain IC785_14435 PF07690 Major Facilitator Superfamily IC785_14440 PF05681 Fumarate hydratase (Fumerase) IC785_14445 PF05683 Fumarase C-terminus IC785_14450 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC785_14450 PF12833 Helix-turn-helix domain IC785_14455 PF00743 Flavin-binding monooxygenase-like IC785_14460 PF00106 short chain dehydrogenase IC785_14465 PF07859 alpha/beta hydrolase fold IC785_14470 PF05199 GMC oxidoreductase IC785_14475 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding IC785_14475 PF18381 YcaO cyclodehydratase C-terminal domain IC785_14480 PF03573 outer membrane porin, OprD family IC785_14490 PF00355 Rieske [2Fe-2S] domain IC785_14495 PF00175 Oxidoreductase NAD-binding domain IC785_14495 PF00111 2Fe-2S iron-sulfur cluster binding domain IC785_14510 PF07690 Major Facilitator Superfamily IC785_14515 PF00378 Enoyl-CoA hydratase/isomerase IC785_14520 PF00171 Aldehyde dehydrogenase family IC785_14530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_14530 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_14530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_14535 PF03573 outer membrane porin, OprD family IC785_14545 PF07519 Tannase and feruloyl esterase IC785_14550 PF00892 EamA-like transporter family IC785_14560 PF12833 Helix-turn-helix domain IC785_14560 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IC785_14565 PF00171 Aldehyde dehydrogenase family IC785_14570 PF00324 Amino acid permease IC785_14575 PF00665 Integrase core domain IC785_14575 PF13936 Helix-turn-helix domain IC785_14580 PF04958 Arginine N-succinyltransferase beta subunit IC785_14585 PF00202 Aminotransferase class-III IC785_14595 PF00171 Aldehyde dehydrogenase family IC785_14605 PF00392 Bacterial regulatory proteins, gntR family IC785_14605 PF07729 FCD domain IC785_14615 PF00324 Amino acid permease IC785_14620 PF01266 FAD dependent oxidoreductase IC785_14625 PF00324 Amino acid permease IC785_14635 PF05643 Putative bacterial lipoprotein (DUF799) IC785_14645 PF03783 Curli production assembly/transport component CsgG IC785_14665 PF13296 Putative type VI secretion system Rhs element Vgr IC785_14665 PF04717 Type VI secretion system, phage-baseplate injector IC785_14665 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IC785_14670 PF00561 alpha/beta hydrolase fold IC785_14675 PF01047 MarR family IC785_14710 PF01925 Sulfite exporter TauE/SafE IC785_14720 PF03180 NLPA lipoprotein IC785_14725 PF05987 Bacterial protein of unknown function (DUF898) IC785_14735 PF01494 FAD binding domain IC785_14745 PF03466 LysR substrate binding domain IC785_14745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_14750 PF01266 FAD dependent oxidoreductase IC785_14755 PF01042 Endoribonuclease L-PSP IC785_14770 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_14770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC785_14775 PF00764 Arginosuccinate synthase IC785_14780 PF00990 Diguanylate cyclase, GGDEF domain IC785_14780 PF00360 Phytochrome region IC785_14780 PF00563 EAL domain IC785_14780 PF01590 GAF domain IC785_14785 PF01979 Amidohydrolase family IC785_14790 PF00929 Exonuclease IC785_14810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC785_14810 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_14815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IC785_14815 PF00005 ABC transporter IC785_14820 PF00528 Binding-protein-dependent transport system inner membrane component IC785_14820 PF12911 N-terminal TM domain of oligopeptide transport permease C IC785_14825 PF00528 Binding-protein-dependent transport system inner membrane component IC785_14830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IC785_14835 PF01464 Transglycosylase SLT domain IC785_14835 PF01476 LysM domain IC785_14840 PF00929 Exonuclease IC785_14850 PF00293 NUDIX domain IC785_14850 PF09297 NADH pyrophosphatase zinc ribbon domain IC785_14860 PF04972 BON domain IC785_14865 PF02021 Uncharacterised protein family UPF0102 IC785_14870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IC785_14880 PF03466 LysR substrate binding domain IC785_14880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_14885 PF01810 LysE type translocator IC785_14895 PF13411 MerR HTH family regulatory protein IC785_14905 PF01494 FAD binding domain IC785_14910 PF01494 FAD binding domain IC785_14915 PF05195 Aminopeptidase P, N-terminal domain IC785_14915 PF00557 Metallopeptidase family M24 IC785_14965 PF00717 Peptidase S24-like IC785_15245 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IC785_15245 PF17854 FtsK alpha domain IC785_15245 PF09397 Ftsk gamma domain IC785_15245 PF01580 FtsK/SpoIIIE family IC785_15275 PF01812 5-formyltetrahydrofolate cyclo-ligase family IC785_15280 PF04355 SmpA / OmlA family IC785_15280 PF00691 OmpA family IC785_15285 PF13018 Extended Signal Peptide of Type V secretion system IC785_15285 PF13018 Extended Signal Peptide of Type V secretion system IC785_15285 PF05662 Coiled stalk of trimeric autotransporter adhesin IC785_15285 PF03895 YadA-like membrane anchor domain IC785_15285 PF05658 Head domain of trimeric autotransporter adhesin IC785_15285 PF03895 YadA-like membrane anchor domain IC785_15285 PF05662 Coiled stalk of trimeric autotransporter adhesin IC785_15285 PF05658 Head domain of trimeric autotransporter adhesin IC785_15295 PF04355 SmpA / OmlA family IC785_15295 PF00691 OmpA family IC785_15305 PF02190 ATP-dependent protease La (LON) substrate-binding domain IC785_15305 PF00004 ATPase family associated with various cellular activities (AAA) IC785_15305 PF05362 Lon protease (S16) C-terminal proteolytic domain IC785_15310 PF02590 Predicted SPOUT methyltransferase IC785_15315 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IC785_15325 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IC785_15325 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IC785_15330 PF04060 Putative Fe-S cluster IC785_15335 PF00730 HhH-GPD superfamily base excision DNA repair protein IC785_15335 PF10576 Iron-sulfur binding domain of endonuclease III IC785_15335 PF00633 Helix-hairpin-helix motif IC785_15345 PF05191 Adenylate kinase, active site lid IC785_15360 PF00905 Penicillin binding protein transpeptidase domain IC785_15360 PF03717 Penicillin-binding Protein dimerisation domain IC785_15380 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC785_15385 PF01730 UreF IC785_15390 PF05194 UreE urease accessory protein, C-terminal domain IC785_15390 PF02814 UreE urease accessory protein, N-terminal domain IC785_15395 PF00449 Urease alpha-subunit, N-terminal domain IC785_15395 PF01979 Amidohydrolase family IC785_15400 PF00699 Urease beta subunit IC785_15405 PF00547 Urease, gamma subunit IC785_15410 PF01774 UreD urease accessory protein IC785_15425 PF00463 Isocitrate lyase family IC785_15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_15430 PF03466 LysR substrate binding domain IC785_15435 PF00571 CBS domain IC785_15435 PF03471 Transporter associated domain IC785_15435 PF01595 Cyclin M transmembrane N-terminal domain IC785_15440 PF00665 Integrase core domain IC785_15440 PF13936 Helix-turn-helix domain IC785_15445 PF03600 Citrate transporter IC785_15460 PF00009 Elongation factor Tu GTP binding domain IC785_15465 PF01507 Phosphoadenosine phosphosulfate reductase family IC785_15475 PF14052 Capsule assembly protein Wzi IC785_15480 PF00152 tRNA synthetases class II (D, K and N) IC785_15480 PF01336 OB-fold nucleic acid binding domain IC785_15495 PF00301 Rubredoxin IC785_15500 PF18113 Rubredoxin binding C-terminal domain IC785_15500 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_15505 PF00561 alpha/beta hydrolase fold IC785_15510 PF03466 LysR substrate binding domain IC785_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_15520 PF13090 Polyphosphate kinase C-terminal domain 2 IC785_15520 PF13089 Polyphosphate kinase N-terminal domain IC785_15520 PF02503 Polyphosphate kinase middle domain IC785_15520 PF17941 Polyphosphate kinase C-terminal domain 1 IC785_15525 PF00912 Transglycosylase IC785_15530 PF01694 Rhomboid family IC785_15540 PF00005 ABC transporter IC785_15545 PF13472 GDSL-like Lipase/Acylhydrolase family IC785_15550 PF00484 Carbonic anhydrase IC785_15555 PF00561 alpha/beta hydrolase fold IC785_15565 PF00593 TonB dependent receptor IC785_15565 PF07715 TonB-dependent Receptor Plug Domain IC785_15570 PF01521 Iron-sulphur cluster biosynthesis IC785_15570 PF01106 NifU-like domain IC785_15580 PF00884 Sulfatase IC785_15585 PF03781 Sulfatase-modifying factor enzyme 1 IC785_15600 PF00291 Pyridoxal-phosphate dependent enzyme IC785_15605 PF01384 Phosphate transporter family IC785_15615 PF02574 Homocysteine S-methyltransferase IC785_15615 PF02310 B12 binding domain IC785_15615 PF00809 Pterin binding enzyme IC785_15615 PF02965 Vitamin B12 dependent methionine synthase, activation domain IC785_15615 PF02607 B12 binding domain IC785_15635 PF01263 Aldose 1-epimerase IC785_15640 PF07690 Major Facilitator Superfamily IC785_15645 PF02311 AraC-like ligand binding domain IC785_15645 PF12833 Helix-turn-helix domain IC785_15650 PF04960 Glutaminase IC785_15655 PF01327 Polypeptide deformylase IC785_15670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC785_15670 PF00205 Thiamine pyrophosphate enzyme, central domain IC785_15670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC785_15675 PF00171 Aldehyde dehydrogenase family IC785_15680 PF01958 Domain of unknown function DUF108 IC785_15680 PF03447 Homoserine dehydrogenase, NAD binding domain IC785_15690 PF12697 Alpha/beta hydrolase family IC785_15700 PF07690 Major Facilitator Superfamily IC785_15705 PF14759 Reductase C-terminal IC785_15705 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_15710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC785_15720 PF00355 Rieske [2Fe-2S] domain IC785_15730 PF00355 Rieske [2Fe-2S] domain IC785_15735 PF09339 IclR helix-turn-helix domain IC785_15735 PF01614 Bacterial transcriptional regulator IC785_15765 PF00378 Enoyl-CoA hydratase/isomerase IC785_15775 PF00535 Glycosyl transferase family 2 IC785_15780 PF14883 Hypothetical glycosyl hydrolase family 13 IC785_15780 PF01522 Polysaccharide deacetylase IC785_15785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC785_15790 PF07152 YaeQ protein IC785_15795 PF00375 Sodium:dicarboxylate symporter family IC785_15800 PF07683 Cobalamin synthesis protein cobW C-terminal domain IC785_15800 PF02492 CobW/HypB/UreG, nucleotide-binding domain IC785_15810 PF03061 Thioesterase superfamily IC785_15820 PF02028 BCCT, betaine/carnitine/choline family transporter IC785_15825 PF02028 BCCT, betaine/carnitine/choline family transporter IC785_15830 PF13977 BetI-type transcriptional repressor, C-terminal IC785_15830 PF00440 Bacterial regulatory proteins, tetR family IC785_15835 PF00171 Aldehyde dehydrogenase family IC785_15840 PF00732 GMC oxidoreductase IC785_15840 PF05199 GMC oxidoreductase IC785_15845 PF06039 Malate:quinone oxidoreductase (Mqo) IC785_15855 PF02574 Homocysteine S-methyltransferase IC785_15860 PF13520 Amino acid permease IC785_15880 PF00701 Dihydrodipicolinate synthetase family IC785_15885 PF00083 Sugar (and other) transporter IC785_15915 PF13936 Helix-turn-helix domain IC785_15915 PF00665 Integrase core domain IC785_15925 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IC785_15925 PF18766 SWI2/SNF2 ATPase IC785_15925 PF12008 Type I restriction and modification enzyme - subunit R C terminal IC785_15950 PF12161 HsdM N-terminal domain IC785_15950 PF02384 N-6 DNA Methylase IC785_15995 PF07690 Major Facilitator Superfamily IC785_16000 PF13533 Biotin-lipoyl like IC785_16005 PF03061 Thioesterase superfamily IC785_16010 PF00490 Delta-aminolevulinic acid dehydratase IC785_16015 PF01266 FAD dependent oxidoreductase IC785_16020 PF01370 NAD dependent epimerase/dehydratase family IC785_16020 PF08338 Domain of unknown function (DUF1731) IC785_16040 PF12320 Type 5 capsule protein repressor C-terminal domain IC785_16040 PF00149 Calcineurin-like phosphoesterase IC785_16060 PF13007 Transposase C of IS166 homeodomain IC785_16060 PF13005 zinc-finger binding domain of transposase IS66 IC785_16060 PF13817 IS66 C-terminal element IC785_16060 PF03050 Transposase IS66 family IC785_16065 PF02673 Bacitracin resistance protein BacA IC785_16070 PF01168 Alanine racemase, N-terminal domain IC785_16075 PF00437 Type II/IV secretion system protein IC785_16080 PF00437 Type II/IV secretion system protein IC785_16085 PF01475 Ferric uptake regulator family IC785_16090 PF04355 SmpA / OmlA family IC785_16095 PF03658 RnfH family Ubiquitin IC785_16105 PF01814 Hemerythrin HHE cation binding domain IC785_16110 PF13230 Glutamine amidotransferases class-II IC785_16120 PF00696 Amino acid kinase family IC785_16125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC785_16125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC785_16125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC785_16125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC785_16130 PF00692 dUTPase IC785_16135 PF00580 UvrD/REP helicase N-terminal domain IC785_16135 PF13361 UvrD-like helicase C-terminal domain IC785_16140 PF13488 Glycine zipper IC785_16140 PF00691 OmpA family IC785_16145 PF01553 Acyltransferase IC785_16155 PF03775 Septum formation inhibitor MinC, C-terminal domain IC785_16160 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IC785_16165 PF03776 Septum formation topological specificity factor MinE IC785_16175 PF01810 LysE type translocator IC785_16180 PF17854 FtsK alpha domain IC785_16180 PF09397 Ftsk gamma domain IC785_16180 PF01580 FtsK/SpoIIIE family IC785_16180 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IC785_16185 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_16190 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IC785_16200 PF00583 Acetyltransferase (GNAT) family IC785_16215 PF03144 Elongation factor Tu domain 2 IC785_16215 PF03143 Elongation factor Tu C-terminal domain IC785_16215 PF00009 Elongation factor Tu GTP binding domain IC785_16220 PF03144 Elongation factor Tu domain 2 IC785_16220 PF14492 Elongation Factor G, domain II IC785_16220 PF00009 Elongation factor Tu GTP binding domain IC785_16220 PF03764 Elongation factor G, domain IV IC785_16220 PF00679 Elongation factor G C-terminus IC785_16225 PF00177 Ribosomal protein S7p/S5e IC785_16230 PF00164 Ribosomal protein S12/S23 IC785_16240 PF02801 Beta-ketoacyl synthase, C-terminal domain IC785_16240 PF00109 Beta-ketoacyl synthase, N-terminal domain IC785_16245 PF03653 Uncharacterised protein family (UPF0093) IC785_16255 PF00795 Carbon-nitrogen hydrolase IC785_16255 PF02540 NAD synthase IC785_16270 PF00970 Oxidoreductase FAD-binding domain IC785_16270 PF00175 Oxidoreductase NAD-binding domain IC785_16270 PF00111 2Fe-2S iron-sulfur cluster binding domain IC785_16275 PF00171 Aldehyde dehydrogenase family IC785_16280 PF00355 Rieske [2Fe-2S] domain IC785_16280 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IC785_16285 PF07859 alpha/beta hydrolase fold IC785_16290 PF02028 BCCT, betaine/carnitine/choline family transporter IC785_16295 PF00180 Isocitrate/isopropylmalate dehydrogenase IC785_16300 PF03466 LysR substrate binding domain IC785_16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_16320 PF00037 4Fe-4S binding domain IC785_16325 PF01467 Cytidylyltransferase-like IC785_16330 PF01668 SmpB protein IC785_16335 PF03358 NADPH-dependent FMN reductase IC785_16340 PF02578 Multi-copper polyphenol oxidoreductase laccase IC785_16345 PF00849 RNA pseudouridylate synthase IC785_16345 PF01479 S4 domain IC785_16350 PF13525 Outer membrane lipoprotein IC785_16355 PF10410 DnaB-helicase binding domain of primase IC785_16355 PF08278 DNA primase DnaG DnaB-binding IC785_16355 PF08275 DNA primase catalytic core, N-terminal domain IC785_16355 PF01807 CHC2 zinc finger IC785_16360 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IC785_16360 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IC785_16360 PF01488 Shikimate / quinate 5-dehydrogenase IC785_16370 PF03550 Outer membrane lipoprotein LolB IC785_16375 PF00288 GHMP kinases N terminal domain IC785_16375 PF08544 GHMP kinases C terminal IC785_16400 PF14572 Phosphoribosyl synthetase-associated domain IC785_16400 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IC785_16405 PF01386 Ribosomal L25p family IC785_16410 PF01195 Peptidyl-tRNA hydrolase IC785_16415 PF02261 Aspartate decarboxylase IC785_16430 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IC785_16440 PF08543 Phosphomethylpyrimidine kinase IC785_16440 PF03070 TENA/THI-4/PQQC family IC785_16440 PF02581 Thiamine monophosphate synthase IC785_16445 PF01476 LysM domain IC785_16445 PF04972 BON domain IC785_16450 PF00550 Phosphopantetheine attachment site IC785_16460 PF00698 Acyl transferase domain IC785_16465 PF01783 Ribosomal L32p protein family IC785_16470 PF02620 Large ribosomal RNA subunit accumulation protein YceD IC785_16475 PF04315 Elongation factor P hydroxylase IC785_16480 PF01300 Telomere recombination IC785_16485 PF02616 Segregation and condensation protein ScpA IC785_16490 PF04079 Segregation and condensation complex subunit ScpB IC785_16495 PF01479 S4 domain IC785_16495 PF00849 RNA pseudouridylate synthase IC785_16510 PF00155 Aminotransferase class I and II IC785_16515 PF00202 Aminotransferase class-III IC785_16515 PF06968 Biotin and Thiamin Synthesis associated domain IC785_16515 PF04055 Radical SAM superfamily IC785_16520 PF12697 Alpha/beta hydrolase family IC785_16520 PF08241 Methyltransferase domain IC785_16525 PF02358 Trehalose-phosphatase IC785_16530 PF00982 Glycosyltransferase family 20 IC785_16535 PF07690 Major Facilitator Superfamily IC785_16540 PF00210 Ferritin-like domain IC785_16545 PF12826 Helix-hairpin-helix motif IC785_16545 PF01653 NAD-dependent DNA ligase adenylation domain IC785_16545 PF03120 NAD-dependent DNA ligase OB-fold domain IC785_16545 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IC785_16545 PF00533 BRCA1 C Terminus (BRCT) domain IC785_16555 PF02463 RecF/RecN/SMC N terminal domain IC785_16555 PF06470 SMC proteins Flexible Hinge Domain IC785_16565 PF01925 Sulfite exporter TauE/SafE IC785_16575 PF03309 Type III pantothenate kinase IC785_16580 PF02978 Signal peptide binding domain IC785_16580 PF02881 SRP54-type protein, helical bundle domain IC785_16580 PF00448 SRP54-type protein, GTPase domain IC785_16590 PF01207 Dihydrouridine synthase (Dus) IC785_16620 PF00692 dUTPase IC785_16635 PF01048 Phosphorylase superfamily IC785_16640 PF10609 NUBPL iron-transfer P-loop NTPase IC785_16650 PF09334 tRNA synthetases class I (M) IC785_16650 PF01588 Putative tRNA binding domain IC785_16680 PF13533 Biotin-lipoyl like IC785_16685 PF00291 Pyridoxal-phosphate dependent enzyme IC785_16700 PF05552 Conserved TM helix IC785_16715 PF00970 Oxidoreductase FAD-binding domain IC785_16715 PF00175 Oxidoreductase NAD-binding domain IC785_16720 PF03466 LysR substrate binding domain IC785_16720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_16730 PF00313 'Cold-shock' DNA-binding domain IC785_16740 PF00361 Proton-conducting membrane transporter IC785_16745 PF00361 Proton-conducting membrane transporter IC785_16750 PF00361 Proton-conducting membrane transporter IC785_16750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IC785_16755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IC785_16760 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IC785_16765 PF12838 4Fe-4S dicluster domain IC785_16770 PF00146 NADH dehydrogenase IC785_16775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IC785_16775 PF00384 Molybdopterin oxidoreductase IC785_16775 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IC785_16780 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IC785_16780 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IC785_16780 PF10531 SLBB domain IC785_16790 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IC785_16790 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IC785_16795 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IC785_16800 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IC785_16805 PF17158 Membrane-associated sensor, integral membrane domain IC785_16805 PF00990 Diguanylate cyclase, GGDEF domain IC785_16815 PF00512 His Kinase A (phospho-acceptor) domain IC785_16815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_16815 PF00672 HAMP domain IC785_16820 PF00486 Transcriptional regulatory protein, C terminal IC785_16820 PF00072 Response regulator receiver domain IC785_16830 PF02867 Ribonucleotide reductase, barrel domain IC785_16830 PF03477 ATP cone domain IC785_16830 PF00317 Ribonucleotide reductase, all-alpha domain IC785_16840 PF00268 Ribonucleotide reductase, small chain IC785_16855 PF00155 Aminotransferase class I and II IC785_16870 PF03969 AFG1-like ATPase IC785_16875 PF03466 LysR substrate binding domain IC785_16875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_16890 PF17074 Darcynin, domain of unknown function IC785_16915 PF01613 Flavin reductase like domain IC785_16920 PF08267 Cobalamin-independent synthase, N-terminal domain IC785_16920 PF01717 Cobalamin-independent synthase, Catalytic domain IC785_16930 PF03466 LysR substrate binding domain IC785_16930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_16935 PF01810 LysE type translocator IC785_16940 PF03466 LysR substrate binding domain IC785_16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_16945 PF07690 Major Facilitator Superfamily IC785_16955 PF03466 LysR substrate binding domain IC785_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_16960 PF00890 FAD binding domain IC785_16960 PF14537 Cytochrome c3 IC785_16975 PF17932 Tetracyclin repressor-like, C-terminal domain IC785_16975 PF00440 Bacterial regulatory proteins, tetR family IC785_16985 PF02515 CoA-transferase family III IC785_16990 PF07690 Major Facilitator Superfamily IC785_16995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_16995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_16995 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_17000 PF03466 LysR substrate binding domain IC785_17000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_17005 PF00107 Zinc-binding dehydrogenase IC785_17005 PF08240 Alcohol dehydrogenase GroES-like domain IC785_17010 PF00962 Adenosine/AMP deaminase IC785_17035 PF02445 Quinolinate synthetase A protein IC785_17040 PF01960 ArgJ family IC785_17045 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IC785_17045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IC785_17050 PF00893 Small Multidrug Resistance protein IC785_17065 PF07732 Multicopper oxidase IC785_17065 PF00394 Multicopper oxidase IC785_17065 PF07731 Multicopper oxidase IC785_17080 PF00834 Ribulose-phosphate 3 epimerase family IC785_17090 PF00756 Putative esterase IC785_17100 PF04445 Putative SAM-dependent methyltransferase IC785_17105 PF00814 Glycoprotease family IC785_17110 PF00132 Bacterial transferase hexapeptide (six repeats) IC785_17115 PF00293 NUDIX domain IC785_17155 PF00425 chorismate binding enzyme IC785_17155 PF04715 Anthranilate synthase component I, N terminal region IC785_17160 PF00155 Aminotransferase class I and II IC785_17165 PF00815 Histidinol dehydrogenase IC785_17170 PF01634 ATP phosphoribosyltransferase IC785_17175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IC785_17180 PF01722 BolA-like protein IC785_17185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IC785_17190 PF04552 Sigma-54, DNA binding domain IC785_17190 PF04963 Sigma-54 factor, core binding domain IC785_17190 PF00309 Sigma-54 factor, Activator interacting domain (AID) IC785_17235 PF00795 Carbon-nitrogen hydrolase IC785_17245 PF01047 MarR family IC785_17250 PF02566 OsmC-like protein IC785_17255 PF00437 Type II/IV secretion system protein IC785_17280 PF02325 YGGT family IC785_17285 PF14748 Pyrroline-5-carboxylate reductase dimerisation IC785_17285 PF03807 NADP oxidoreductase coenzyme F420-dependent IC785_17290 PF01171 PP-loop family IC785_17290 PF11734 TilS substrate C-terminal domain IC785_17290 PF09179 TilS substrate binding domain IC785_17295 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IC785_17300 PF02541 Ppx/GppA phosphatase family IC785_17305 PF00085 Thioredoxin IC785_17310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC785_17310 PF07497 Rho termination factor, RNA-binding domain IC785_17310 PF07498 Rho termination factor, N-terminal domain IC785_17325 PF00216 Bacterial DNA-binding protein IC785_17330 PF03483 B3/4 domain IC785_17330 PF03484 tRNA synthetase B5 domain IC785_17330 PF03147 Ferredoxin-fold anticodon binding domain IC785_17330 PF01588 Putative tRNA binding domain IC785_17330 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IC785_17335 PF01409 tRNA synthetases class II core domain (F) IC785_17335 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IC785_17355 PF00453 Ribosomal protein L20 IC785_17360 PF01632 Ribosomal protein L35 IC785_17365 PF07690 Major Facilitator Superfamily IC785_17370 PF09335 SNARE associated Golgi protein IC785_17375 PF00043 Glutathione S-transferase, C-terminal domain IC785_17375 PF02798 Glutathione S-transferase, N-terminal domain IC785_17380 PF05198 Translation initiation factor IF-3, N-terminal domain IC785_17380 PF00707 Translation initiation factor IF-3, C-terminal domain IC785_17385 PF02824 TGS domain IC785_17385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IC785_17385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IC785_17385 PF03129 Anticodon binding domain IC785_17390 PF00501 AMP-binding enzyme IC785_17390 PF13193 AMP-binding enzyme C-terminal domain IC785_17395 PF04751 Protein of unknown function (DUF615) IC785_17400 PF00381 PTS HPr component phosphorylation site IC785_17405 PF03668 P-loop ATPase protein family IC785_17410 PF02569 Pantoate-beta-alanine ligase IC785_17415 PF02548 Ketopantoate hydroxymethyltransferase IC785_17420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IC785_17425 PF12627 Probable RNA and SrmB- binding site of polymerase A IC785_17425 PF01743 Poly A polymerase head domain IC785_17425 PF12626 Polymerase A arginine-rich C-terminus IC785_17435 PF03819 MazG nucleotide pyrophosphohydrolase domain IC785_17445 PF02824 TGS domain IC785_17445 PF04607 Region found in RelA / SpoT proteins IC785_17445 PF13291 ACT domain IC785_17450 PF05958 tRNA (Uracil-5-)-methyltransferase IC785_17460 PF00291 Pyridoxal-phosphate dependent enzyme IC785_17465 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IC785_17465 PF00672 HAMP domain IC785_17465 PF00512 His Kinase A (phospho-acceptor) domain IC785_17465 PF01627 Hpt domain IC785_17465 PF00072 Response regulator receiver domain IC785_17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_17470 PF00378 Enoyl-CoA hydratase/isomerase IC785_17475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IC785_17475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IC785_17480 PF01261 Xylose isomerase-like TIM barrel IC785_17495 PF00106 short chain dehydrogenase IC785_17500 PF02233 NAD(P) transhydrogenase beta subunit IC785_17505 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IC785_17510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IC785_17510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IC785_17515 PF00892 EamA-like transporter family IC785_17525 PF07690 Major Facilitator Superfamily IC785_17540 PF09828 Chromate resistance exported protein IC785_17545 PF02417 Chromate transporter IC785_17550 PF01545 Cation efflux family IC785_17565 PF07690 Major Facilitator Superfamily IC785_17585 PF00873 AcrB/AcrD/AcrF family IC785_17590 PF00529 HlyD membrane-fusion protein of T1SS IC785_17590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC785_17665 PF00589 Phage integrase family IC785_17670 PF01207 Dihydrouridine synthase (Dus) IC785_17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_17680 PF03466 LysR substrate binding domain IC785_17690 PF00899 ThiF family IC785_17695 PF00330 Aconitase family (aconitate hydratase) IC785_17695 PF00694 Aconitase C-terminal domain IC785_17700 PF01026 TatD related DNase IC785_17715 PF00009 Elongation factor Tu GTP binding domain IC785_17715 PF03144 Elongation factor Tu domain 2 IC785_17715 PF16658 Class II release factor RF3, C-terminal domain IC785_17750 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IC785_17750 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IC785_17755 PF10369 Small subunit of acetolactate synthase IC785_17760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IC785_17760 PF00205 Thiamine pyrophosphate enzyme, central domain IC785_17760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IC785_17770 PF00133 tRNA synthetases class I (I, L, M and V) IC785_17770 PF08264 Anticodon-binding domain of tRNA IC785_17770 PF13603 Leucyl-tRNA synthetase, Domain 2 IC785_17770 PF09334 tRNA synthetases class I (M) IC785_17785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC785_17790 PF12704 MacB-like periplasmic core domain IC785_17790 PF00005 ABC transporter IC785_17790 PF02687 FtsX-like permease family IC785_17795 PF02321 Outer membrane efflux protein IC785_17810 PF00929 Exonuclease IC785_17815 PF03193 RsgA GTPase IC785_17825 PF00462 Glutaredoxin IC785_17830 PF02556 Preprotein translocase subunit SecB IC785_17840 PF01926 50S ribosome-binding GTPase IC785_17840 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IC785_17845 PF13360 PQQ-like domain IC785_17855 PF03129 Anticodon binding domain IC785_17855 PF13393 Histidyl-tRNA synthetase IC785_17860 PF04551 GcpE protein IC785_17865 PF13464 Domain of unknown function (DUF4115) IC785_17875 PF04055 Radical SAM superfamily IC785_17880 PF00334 Nucleoside diphosphate kinase IC785_17885 PF04384 Iron-sulphur cluster assembly IC785_17890 PF01569 PAP2 superfamily IC785_17895 PF00534 Glycosyl transferases group 1 IC785_17895 PF13439 Glycosyltransferase Family 4 IC785_17900 PF03572 Peptidase family S41 IC785_17900 PF00595 PDZ domain IC785_17900 PF17804 Tail specific protease N-terminal domain IC785_17900 PF11818 C-terminal domain of tail specific protease (DUF3340) IC785_17905 PF00933 Glycosyl hydrolase family 3 N terminal domain IC785_17920 PF00171 Aldehyde dehydrogenase family IC785_17925 PF00171 Aldehyde dehydrogenase family IC785_17930 PF01202 Shikimate kinase IC785_17935 PF02447 GntP family permease IC785_17940 PF01081 KDPG and KHG aldolase IC785_17945 PF00920 Dehydratase family IC785_17950 PF00871 Acetokinase family IC785_17955 PF07085 DRTGG domain IC785_17955 PF01515 Phosphate acetyl/butaryl transferase IC785_17960 PF05681 Fumarate hydratase (Fumerase) IC785_17960 PF05683 Fumarase C-terminus IC785_17975 PF07724 AAA domain (Cdc48 subfamily) IC785_17975 PF10431 C-terminal, D2-small domain, of ClpB protein IC785_17975 PF06689 ClpX C4-type zinc finger IC785_17980 PF00574 Clp protease IC785_17985 PF05698 Bacterial trigger factor protein (TF) C-terminus IC785_17985 PF05697 Bacterial trigger factor protein (TF) IC785_17985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC785_17990 PF00593 TonB dependent receptor IC785_17990 PF07715 TonB-dependent Receptor Plug Domain IC785_17995 PF13640 2OG-Fe(II) oxygenase superfamily IC785_17995 PF18331 PKHD-type hydroxylase C-terminal domain IC785_18000 PF00682 HMGL-like IC785_18000 PF08502 LeuA allosteric (dimerisation) domain IC785_18005 PF00561 alpha/beta hydrolase fold IC785_18010 PF00561 alpha/beta hydrolase fold IC785_18010 PF07021 Methionine biosynthesis protein MetW IC785_18020 PF01725 Ham1 family IC785_18030 PF02416 mttA/Hcf106 family IC785_18035 PF02416 mttA/Hcf106 family IC785_18040 PF00902 Sec-independent protein translocase protein (TatC) IC785_18055 PF01790 Prolipoprotein diacylglyceryl transferase IC785_18070 PF00303 Thymidylate synthase IC785_18075 PF00186 Dihydrofolate reductase IC785_18085 PF01625 Peptide methionine sulfoxide reductase IC785_18090 PF02472 Biopolymer transport protein ExbD/TolR IC785_18095 PF01618 MotA/TolQ/ExbB proton channel family IC785_18105 PF01842 ACT domain IC785_18105 PF00551 Formyl transferase IC785_18115 PF00171 Aldehyde dehydrogenase family IC785_18120 PF00830 Ribosomal L28 family IC785_18125 PF00471 Ribosomal protein L33 IC785_18130 PF00999 Sodium/hydrogen exchanger family IC785_18130 PF02254 TrkA-N domain IC785_18150 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IC785_18155 PF13361 UvrD-like helicase C-terminal domain IC785_18155 PF00580 UvrD/REP helicase N-terminal domain IC785_18170 PF01396 Topoisomerase DNA binding C4 zinc finger IC785_18170 PF08272 Topoisomerase I zinc-ribbon-like IC785_18170 PF01751 Toprim domain IC785_18170 PF01131 DNA topoisomerase IC785_18180 PF01638 HxlR-like helix-turn-helix IC785_18185 PF00107 Zinc-binding dehydrogenase IC785_18185 PF08240 Alcohol dehydrogenase GroES-like domain IC785_18190 PF04102 SlyX IC785_18195 PF00005 ABC transporter IC785_18195 PF16326 ABC transporter C-terminal domain IC785_18195 PF12848 ABC transporter IC785_18205 PF01810 LysE type translocator IC785_18210 PF03279 Bacterial lipid A biosynthesis acyltransferase IC785_18220 PF00375 Sodium:dicarboxylate symporter family IC785_18230 PF01118 Semialdehyde dehydrogenase, NAD binding domain IC785_18230 PF02774 Semialdehyde dehydrogenase, dimerisation domain IC785_18250 PF01416 tRNA pseudouridine synthase IC785_18260 PF01176 Translation initiation factor 1A / IF-1 IC785_18275 PF00180 Isocitrate/isopropylmalate dehydrogenase IC785_18285 PF00694 Aconitase C-terminal domain IC785_18290 PF00330 Aconitase family (aconitate hydratase) IC785_18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_18300 PF03466 LysR substrate binding domain IC785_18325 PF00293 NUDIX domain IC785_18335 PF00141 Peroxidase IC785_18340 PF12706 Beta-lactamase superfamily domain IC785_18345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_18345 PF03466 LysR substrate binding domain IC785_18355 PF02798 Glutathione S-transferase, N-terminal domain IC785_18360 PF08279 HTH domain IC785_18360 PF13280 WYL domain IC785_18370 PF00849 RNA pseudouridylate synthase IC785_18370 PF01479 S4 domain IC785_18375 PF12111 Polyribonucleotide phosphorylase C terminal IC785_18375 PF10150 Ribonuclease E/G family IC785_18375 PF00575 S1 RNA binding domain IC785_18380 PF13193 AMP-binding enzyme C-terminal domain IC785_18380 PF00501 AMP-binding enzyme IC785_18395 PF03466 LysR substrate binding domain IC785_18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_18400 PF00106 short chain dehydrogenase IC785_18405 PF06969 HemN C-terminal domain IC785_18405 PF04055 Radical SAM superfamily IC785_18415 PF01554 MatE IC785_18420 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC785_18420 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_18420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_18425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_18425 PF08028 Acyl-CoA dehydrogenase, C-terminal domain IC785_18430 PF03109 ABC1 family IC785_18435 PF01197 Ribosomal protein L31 IC785_18450 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IC785_18460 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_18460 PF13247 4Fe-4S dicluster domain IC785_18460 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IC785_18470 PF03884 DNA gyrase inhibitor YacG IC785_18475 PF00753 Metallo-beta-lactamase superfamily IC785_18480 PF00762 Ferrochelatase IC785_18490 PF01177 Asp/Glu/Hydantoin racemase IC785_18510 PF01206 Sulfurtransferase TusA IC785_18515 PF03471 Transporter associated domain IC785_18515 PF00571 CBS domain IC785_18520 PF00795 Carbon-nitrogen hydrolase IC785_18525 PF01588 Putative tRNA binding domain IC785_18540 PF08334 Type II secretion system (T2SS), protein G IC785_18540 PF07963 Prokaryotic N-terminal methylation motif IC785_18545 PF00482 Type II secretion system (T2SS), protein F IC785_18550 PF00271 Helicase conserved C-terminal domain IC785_18550 PF18074 Primosomal protein N C-terminal domain IC785_18550 PF00270 DEAD/DEAH box helicase IC785_18550 PF17764 3′ DNA-binding domain (3′BD) IC785_18550 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IC785_18555 PF02254 TrkA-N domain IC785_18555 PF00999 Sodium/hydrogen exchanger family IC785_18560 PF01430 Hsp33 protein IC785_18570 PF00226 DnaJ domain IC785_18570 PF01556 DnaJ C terminal domain IC785_18580 PF01544 CorA-like Mg2+ transporter protein IC785_18585 PF00575 S1 RNA binding domain IC785_18585 PF03725 3' exoribonuclease family, domain 2 IC785_18585 PF01138 3' exoribonuclease family, domain 1 IC785_18585 PF00013 KH domain IC785_18585 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IC785_18590 PF00312 Ribosomal protein S15 IC785_18595 PF00144 Beta-lactamase IC785_18600 PF13538 UvrD-like helicase C-terminal domain IC785_18605 PF12705 PD-(D/E)XK nuclease superfamily IC785_18605 PF00580 UvrD/REP helicase N-terminal domain IC785_18605 PF13361 UvrD-like helicase C-terminal domain IC785_18610 PF17946 RecC C-terminal domain IC785_18620 PF07690 Major Facilitator Superfamily IC785_18625 PF03976 Polyphosphate kinase 2 (PPK2) IC785_18635 PF01209 ubiE/COQ5 methyltransferase family IC785_18645 PF03109 ABC1 family IC785_18650 PF01494 FAD binding domain IC785_18655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IC785_18665 PF01502 Phosphoribosyl-AMP cyclohydrolase IC785_18680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IC785_18680 PF00361 Proton-conducting membrane transporter IC785_18680 PF13244 Domain of unknown function (DUF4040) IC785_18680 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IC785_18685 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IC785_18690 PF00361 Proton-conducting membrane transporter IC785_18695 PF01899 Na+/H+ ion antiporter subunit IC785_18700 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IC785_18705 PF03334 Na+/H+ antiporter subunit IC785_18710 PF02033 Ribosome-binding factor A IC785_18715 PF00009 Elongation factor Tu GTP binding domain IC785_18715 PF08364 Bacterial translation initiation factor IF-2 associated region IC785_18715 PF11987 Translation-initiation factor 2 IC785_18715 PF04760 Translation initiation factor IF-2, N-terminal region IC785_18720 PF13184 NusA-like KH domain IC785_18720 PF08529 NusA N-terminal domain IC785_18720 PF00575 S1 RNA binding domain IC785_18725 PF02576 RimP N-terminal domain IC785_18725 PF17384 RimP C-terminal SH3 domain IC785_18745 PF03840 Preprotein translocase SecG subunit IC785_18750 PF00121 Triosephosphate isomerase IC785_18755 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IC785_18755 PF00437 Type II/IV secretion system protein IC785_18760 PF00482 Type II secretion system (T2SS), protein F IC785_18765 PF06750 Bacterial Peptidase A24 N-terminal domain IC785_18765 PF01478 Type IV leader peptidase family IC785_18770 PF01121 Dephospho-CoA kinase IC785_18780 PF08032 RNA 2'-O ribose methyltransferase substrate binding IC785_18780 PF00588 SpoU rRNA Methylase family IC785_18785 PF06865 Pyrimidine/purine nucleoside phosphorylase IC785_18790 PF02463 RecF/RecN/SMC N terminal domain IC785_18795 PF02622 Uncharacterized ACR, COG1678 IC785_18800 PF03652 Holliday junction resolvase IC785_18805 PF13533 Biotin-lipoyl like IC785_18815 PF04632 Fusaric acid resistance protein family IC785_18830 PF01066 CDP-alcohol phosphatidyltransferase IC785_18840 PF08459 UvrC Helix-hairpin-helix N-terminal IC785_18840 PF02151 UvrB/uvrC motif IC785_18840 PF01541 GIY-YIG catalytic domain IC785_18860 PF00378 Enoyl-CoA hydratase/isomerase IC785_18860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IC785_18860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IC785_18865 PF02803 Thiolase, C-terminal domain IC785_18865 PF00108 Thiolase, N-terminal domain IC785_18880 PF00376 MerR family regulatory protein IC785_18880 PF09278 MerR, DNA binding IC785_18890 PF01323 DSBA-like thioredoxin domain IC785_18905 PF00183 Hsp90 protein IC785_18905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_18920 PF13726 Na+-H+ antiporter family IC785_18920 PF03553 Na+/H+ antiporter family IC785_18925 PF00561 alpha/beta hydrolase fold IC785_18945 PF00623 RNA polymerase Rpb1, domain 2 IC785_18945 PF05000 RNA polymerase Rpb1, domain 4 IC785_18945 PF04997 RNA polymerase Rpb1, domain 1 IC785_18945 PF04983 RNA polymerase Rpb1, domain 3 IC785_18945 PF04998 RNA polymerase Rpb1, domain 5 IC785_18950 PF04560 RNA polymerase Rpb2, domain 7 IC785_18950 PF04563 RNA polymerase beta subunit IC785_18950 PF04561 RNA polymerase Rpb2, domain 2 IC785_18950 PF04565 RNA polymerase Rpb2, domain 3 IC785_18950 PF10385 RNA polymerase beta subunit external 1 domain IC785_18950 PF00562 RNA polymerase Rpb2, domain 6 IC785_18955 PF00542 Ribosomal protein L7/L12 C-terminal domain IC785_18955 PF16320 Ribosomal protein L7/L12 dimerisation domain IC785_18960 PF00466 Ribosomal protein L10 IC785_18965 PF00687 Ribosomal protein L1p/L10e family IC785_18970 PF03946 Ribosomal protein L11, N-terminal domain IC785_18970 PF00298 Ribosomal protein L11, RNA binding domain IC785_18975 PF00467 KOW motif IC785_18975 PF02357 Transcription termination factor nusG IC785_18980 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IC785_18990 PF03144 Elongation factor Tu domain 2 IC785_18990 PF00009 Elongation factor Tu GTP binding domain IC785_18990 PF03143 Elongation factor Tu C-terminal domain IC785_19015 PF04715 Anthranilate synthase component I, N terminal region IC785_19015 PF00425 chorismate binding enzyme IC785_19020 PF13419 Haloacid dehalogenase-like hydrolase IC785_19025 PF12401 Protein of unknown function (DUF2662) IC785_19025 PF00498 FHA domain IC785_19030 PF00263 Bacterial type II and III secretion system protein IC785_19030 PF03958 Bacterial type II/III secretion system short domain IC785_19045 PF00816 H-NS histone family IC785_19070 PF03900 Porphobilinogen deaminase, C-terminal domain IC785_19070 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IC785_19075 PF00072 Response regulator receiver domain IC785_19075 PF04397 LytTr DNA-binding domain IC785_19080 PF07694 5TMR of 5TMR-LYT IC785_19080 PF06580 Histidine kinase IC785_19080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_19085 PF14698 Argininosuccinate lyase C-terminal IC785_19085 PF00206 Lyase IC785_19090 PF04362 Bacterial Fe(2+) trafficking IC785_19095 PF01895 PhoU domain IC785_19100 PF02321 Outer membrane efflux protein IC785_19110 PF00892 EamA-like transporter family IC785_19125 PF01964 Radical SAM ThiC family IC785_19125 PF13667 ThiC-associated domain IC785_19130 PF00293 NUDIX domain IC785_19135 PF00149 Calcineurin-like phosphoesterase IC785_19140 PF01258 Prokaryotic dksA/traR C4-type zinc finger IC785_19145 PF00749 tRNA synthetases class I (E and Q), catalytic domain IC785_19150 PF01098 Cell cycle protein IC785_19155 PF08245 Mur ligase middle domain IC785_19155 PF02875 Mur ligase family, glutamate ligase domain IC785_19165 PF07670 Nucleoside recognition IC785_19165 PF07664 Ferrous iron transport protein B C terminus IC785_19165 PF02421 Ferrous iron transport protein B IC785_19175 PF02899 Phage integrase, N-terminal SAM-like domain IC785_19175 PF00589 Phage integrase family IC785_19180 PF13098 Thioredoxin-like domain IC785_19180 PF10411 Disulfide bond isomerase protein N-terminus IC785_19185 PF00742 Homoserine dehydrogenase IC785_19185 PF03447 Homoserine dehydrogenase, NAD binding domain IC785_19185 PF01842 ACT domain IC785_19190 PF00291 Pyridoxal-phosphate dependent enzyme IC785_19195 PF00768 D-alanyl-D-alanine carboxypeptidase IC785_19200 PF00196 Bacterial regulatory proteins, luxR family IC785_19200 PF00072 Response regulator receiver domain IC785_19205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_19205 PF00512 His Kinase A (phospho-acceptor) domain IC785_19210 PF02954 Bacterial regulatory protein, Fis family IC785_19210 PF00072 Response regulator receiver domain IC785_19210 PF00158 Sigma-54 interaction domain IC785_19215 PF03572 Peptidase family S41 IC785_19215 PF00595 PDZ domain IC785_19220 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IC785_19220 PF01676 Metalloenzyme superfamily IC785_19225 PF03739 Lipopolysaccharide export system permease LptF/LptG IC785_19230 PF03739 Lipopolysaccharide export system permease LptF/LptG IC785_19235 PF02789 Cytosol aminopeptidase family, N-terminal domain IC785_19235 PF00883 Cytosol aminopeptidase family, catalytic domain IC785_19255 PF00677 Lumazine binding domain IC785_19265 PF01872 RibD C-terminal domain IC785_19265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IC785_19270 PF03477 ATP cone domain IC785_19275 PF00909 Ammonium Transporter Family IC785_19280 PF00543 Nitrogen regulatory protein P-II IC785_19290 PF13335 Magnesium chelatase, subunit ChlI C-terminal IC785_19290 PF01078 Magnesium chelatase, subunit ChlI IC785_19295 PF03358 NADPH-dependent FMN reductase IC785_19300 PF00392 Bacterial regulatory proteins, gntR family IC785_19300 PF00155 Aminotransferase class I and II IC785_19305 PF00596 Class II Aldolase and Adducin N-terminal domain IC785_19310 PF00701 Dihydrodipicolinate synthetase family IC785_19320 PF03573 outer membrane porin, OprD family IC785_19325 PF00719 Inorganic pyrophosphatase IC785_19340 PF13193 AMP-binding enzyme C-terminal domain IC785_19340 PF00501 AMP-binding enzyme IC785_19345 PF03989 DNA gyrase C-terminal domain, beta-propeller IC785_19345 PF00521 DNA gyrase/topoisomerase IV, subunit A IC785_19350 PF07690 Major Facilitator Superfamily IC785_19355 PF03458 UPF0126 domain IC785_19360 PF02810 SEC-C motif IC785_19365 PF03471 Transporter associated domain IC785_19365 PF03741 Integral membrane protein TerC family IC785_19370 PF03641 Possible lysine decarboxylase IC785_19375 PF07690 Major Facilitator Superfamily IC785_19385 PF11799 impB/mucB/samB family C-terminal domain IC785_19385 PF11798 IMS family HHH motif IC785_19385 PF00817 impB/mucB/samB family IC785_19400 PF08497 Radical SAM N-terminal IC785_19400 PF04055 Radical SAM superfamily IC785_19400 PF11842 Domain of unknown function (DUF3362) IC785_19420 PF03358 NADPH-dependent FMN reductase IC785_19435 PF00291 Pyridoxal-phosphate dependent enzyme IC785_19470 PF00440 Bacterial regulatory proteins, tetR family IC785_19495 PF01327 Polypeptide deformylase IC785_19505 PF02481 DNA recombination-mediator protein A IC785_19505 PF17782 DprA winged helix domain IC785_19510 PF01300 Telomere recombination IC785_19515 PF00892 EamA-like transporter family IC785_19520 PF00440 Bacterial regulatory proteins, tetR family IC785_19525 PF07690 Major Facilitator Superfamily IC785_19535 PF00255 Glutathione peroxidase IC785_19545 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IC785_19550 PF02874 ATP synthase alpha/beta family, beta-barrel domain IC785_19550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC785_19555 PF00231 ATP synthase IC785_19560 PF02874 ATP synthase alpha/beta family, beta-barrel domain IC785_19560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IC785_19560 PF00306 ATP synthase alpha/beta chain, C terminal domain IC785_19565 PF00213 ATP synthase delta (OSCP) subunit IC785_19570 PF00430 ATP synthase B/B' CF(0) IC785_19575 PF00137 ATP synthase subunit C IC785_19580 PF00119 ATP synthase A chain IC785_19600 PF00005 ABC transporter IC785_19605 PF00950 ABC 3 transport family IC785_19610 PF01810 LysE type translocator IC785_19620 PF13936 Helix-turn-helix domain IC785_19620 PF00665 Integrase core domain IC785_19630 PF03949 Malic enzyme, NAD binding domain IC785_19630 PF00390 Malic enzyme, N-terminal domain IC785_19635 PF00750 tRNA synthetases class I (R) IC785_19635 PF03485 Arginyl tRNA synthetase N terminal domain IC785_19635 PF05746 DALR anticodon binding domain IC785_19655 PF02678 Pirin IC785_19655 PF05726 Pirin C-terminal cupin domain IC785_19665 PF01475 Ferric uptake regulator family IC785_19670 PF03551 Transcriptional regulator PadR-like family IC785_19675 PF13302 Acetyltransferase (GNAT) domain IC785_19680 PF02540 NAD synthase IC785_19680 PF00958 GMP synthase C terminal domain IC785_19680 PF00117 Glutamine amidotransferase class-I IC785_19685 PF04286 Protein of unknown function (DUF445) IC785_19690 PF07681 DoxX IC785_19695 PF09335 SNARE associated Golgi protein IC785_19710 PF13614 AAA domain IC785_19720 PF01722 BolA-like protein IC785_19735 PF01648 4'-phosphopantetheinyl transferase superfamily IC785_19740 PF16363 GDP-mannose 4,6 dehydratase IC785_19755 PF13193 AMP-binding enzyme C-terminal domain IC785_19755 PF00975 Thioesterase domain IC785_19755 PF00550 Phosphopantetheine attachment site IC785_19755 PF00501 AMP-binding enzyme IC785_19755 PF00668 Condensation domain IC785_19760 PF00550 Phosphopantetheine attachment site IC785_19760 PF00109 Beta-ketoacyl synthase, N-terminal domain IC785_19760 PF08242 Methyltransferase domain IC785_19760 PF02801 Beta-ketoacyl synthase, C-terminal domain IC785_19760 PF00975 Thioesterase domain IC785_19760 PF16197 Ketoacyl-synthetase C-terminal extension IC785_19760 PF14765 Polyketide synthase dehydratase IC785_19765 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_19765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_19765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_19770 PF00501 AMP-binding enzyme IC785_19775 PF03472 Autoinducer binding domain IC785_19775 PF00196 Bacterial regulatory proteins, luxR family IC785_19785 PF00765 Autoinducer synthase IC785_19790 PF07690 Major Facilitator Superfamily IC785_19790 PF00083 Sugar (and other) transporter IC785_19795 PF00378 Enoyl-CoA hydratase/isomerase IC785_19800 PF00378 Enoyl-CoA hydratase/isomerase IC785_19805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IC785_19805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IC785_19805 PF02770 Acyl-CoA dehydrogenase, middle domain IC785_19810 PF13193 AMP-binding enzyme C-terminal domain IC785_19810 PF00501 AMP-binding enzyme IC785_19815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IC785_19815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IC785_19820 PF00171 Aldehyde dehydrogenase family IC785_19830 PF00324 Amino acid permease IC785_19835 PF00324 Amino acid permease IC785_19840 PF01042 Endoribonuclease L-PSP IC785_19845 PF01168 Alanine racemase, N-terminal domain IC785_19845 PF00842 Alanine racemase, C-terminal domain IC785_19850 PF01266 FAD dependent oxidoreductase IC785_19855 PF01037 Lrp/AsnC ligand binding domain IC785_19865 PF00593 TonB dependent receptor IC785_19865 PF07715 TonB-dependent Receptor Plug Domain IC785_19880 PF00849 RNA pseudouridylate synthase IC785_19900 PF08361 MAATS-type transcriptional repressor, C-terminal region IC785_19900 PF00440 Bacterial regulatory proteins, tetR family IC785_19910 PF02801 Beta-ketoacyl synthase, C-terminal domain IC785_19910 PF00109 Beta-ketoacyl synthase, N-terminal domain IC785_19950 PF00694 Aconitase C-terminal domain IC785_19950 PF00330 Aconitase family (aconitate hydratase) IC785_19955 PF00285 Citrate synthase, C-terminal domain IC785_19965 PF00392 Bacterial regulatory proteins, gntR family IC785_19965 PF07729 FCD domain IC785_19975 PF00155 Aminotransferase class I and II IC785_19980 PF09330 D-lactate dehydrogenase, membrane binding IC785_19980 PF01565 FAD binding domain IC785_19985 PF01070 FMN-dependent dehydrogenase IC785_19990 PF07729 FCD domain IC785_19990 PF00392 Bacterial regulatory proteins, gntR family IC785_19995 PF02652 L-lactate permease IC785_20000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IC785_20000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IC785_20000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IC785_20000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IC785_20010 PF00342 Phosphoglucose isomerase IC785_20015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IC785_20015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IC785_20015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IC785_20020 PF00483 Nucleotidyl transferase IC785_20025 PF02397 Bacterial sugar transferase IC785_20035 PF01370 NAD dependent epimerase/dehydratase family IC785_20045 PF00535 Glycosyl transferase family 2 IC785_20070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IC785_20075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IC785_20080 PF02719 Polysaccharide biosynthesis protein IC785_20080 PF08485 Polysaccharide biosynthesis protein C-terminal IC785_20085 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IC785_20090 PF00483 Nucleotidyl transferase IC785_20095 PF04321 RmlD substrate binding domain IC785_20100 PF16363 GDP-mannose 4,6 dehydratase IC785_20105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IC785_20105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IC785_20105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IC785_20110 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IC785_20110 PF02563 Polysaccharide biosynthesis/export protein IC785_20110 PF10531 SLBB domain IC785_20115 PF01451 Low molecular weight phosphotyrosine protein phosphatase IC785_20120 PF02706 Chain length determinant protein IC785_20120 PF13807 G-rich domain on putative tyrosine kinase IC785_20120 PF13614 AAA domain IC785_20125 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IC785_20125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC785_20130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC785_20130 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IC785_20135 PF03023 Lipid II flippase MurJ IC785_20140 PF01510 N-acetylmuramoyl-L-alanine amidase IC785_20145 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IC785_20145 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IC785_20155 PF04185 Phosphoesterase family IC785_20155 PF05506 Domain of unknown function (DUF756) IC785_20160 PF03725 3' exoribonuclease family, domain 2 IC785_20160 PF01138 3' exoribonuclease family, domain 1 IC785_20165 PF00487 Fatty acid desaturase IC785_20170 PF00175 Oxidoreductase NAD-binding domain IC785_20175 PF00440 Bacterial regulatory proteins, tetR family IC785_20180 PF08360 QacR-like protein, C-terminal region IC785_20180 PF00440 Bacterial regulatory proteins, tetR family IC785_20185 PF01323 DSBA-like thioredoxin domain IC785_20195 PF13419 Haloacid dehalogenase-like hydrolase IC785_20200 PF00106 short chain dehydrogenase IC785_20215 PF00583 Acetyltransferase (GNAT) family IC785_20215 PF00696 Amino acid kinase family IC785_20220 PF09084 NMT1/THI5 like IC785_20225 PF09084 NMT1/THI5 like IC785_20230 PF00296 Luciferase-like monooxygenase IC785_20235 PF00528 Binding-protein-dependent transport system inner membrane component IC785_20240 PF00005 ABC transporter IC785_20245 PF00440 Bacterial regulatory proteins, tetR family IC785_20245 PF08362 YcdC-like protein, C-terminal region IC785_20250 PF01048 Phosphorylase superfamily IC785_20260 PF01687 Riboflavin kinase IC785_20260 PF06574 FAD synthetase IC785_20265 PF08264 Anticodon-binding domain of tRNA IC785_20265 PF00133 tRNA synthetases class I (I, L, M and V) IC785_20265 PF06827 Zinc finger found in FPG and IleRS IC785_20270 PF01252 Signal peptidase (SPase) II IC785_20275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IC785_20315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IC785_20320 PF07859 alpha/beta hydrolase fold IC785_20345 PF01025 GrpE IC785_20350 PF00012 Hsp70 protein IC785_20360 PF00665 Integrase core domain IC785_20360 PF13936 Helix-turn-helix domain IC785_20380 PF13406 Transglycosylase SLT domain IC785_20385 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IC785_20385 PF02222 ATP-grasp domain IC785_20390 PF00731 AIR carboxylase IC785_20400 PF01225 Mur ligase family, catalytic domain IC785_20400 PF02875 Mur ligase family, glutamate ligase domain IC785_20400 PF08245 Mur ligase middle domain IC785_20410 PF01569 PAP2 superfamily IC785_20415 PF03741 Integral membrane protein TerC family IC785_20425 PF03738 Glutathionylspermidine synthase preATP-grasp IC785_20430 PF00355 Rieske [2Fe-2S] domain IC785_20435 PF01979 Amidohydrolase family IC785_20440 PF00156 Phosphoribosyl transferase domain IC785_20450 PF13098 Thioredoxin-like domain IC785_20450 PF10411 Disulfide bond isomerase protein N-terminus IC785_20455 PF02583 Metal-sensitive transcriptional repressor IC785_20460 PF01926 50S ribosome-binding GTPase IC785_20460 PF12631 MnmE helical domain IC785_20460 PF10396 GTP-binding protein TrmE N-terminus IC785_20465 PF02096 60Kd inner membrane protein IC785_20465 PF14849 YidC periplasmic domain IC785_20470 PF01809 Putative membrane protein insertion efficiency factor IC785_20475 PF00825 Ribonuclease P IC785_20480 PF00468 Ribosomal protein L34 IC785_20600 PF13737 Transposase DDE domain IC785_20650 PF13936 Helix-turn-helix domain IC785_20650 PF00665 Integrase core domain IC785_20670 PF01435 Peptidase family M48 IC785_20700 PF00665 Integrase core domain IC785_20710 PF13005 zinc-finger binding domain of transposase IS66 IC785_20710 PF13007 Transposase C of IS166 homeodomain IC785_20710 PF13817 IS66 C-terminal element IC785_20710 PF03050 Transposase IS66 family IC785_20735 PF00582 Universal stress protein family IC785_20740 PF01740 STAS domain IC785_20740 PF00916 Sulfate permease family IC785_20770 PF02899 Phage integrase, N-terminal SAM-like domain IC785_20770 PF00589 Phage integrase family IC785_20795 PF00665 Integrase core domain IC785_20810 PF00809 Pterin binding enzyme IC785_20825 PF07690 Major Facilitator Superfamily IC785_20830 PF02909 Tetracyclin repressor-like, C-terminal domain IC785_20830 PF00440 Bacterial regulatory proteins, tetR family IC785_20855 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase IC785_20860 PF01636 Phosphotransferase enzyme family IC785_20875 PF01751 Toprim domain IC785_20875 PF01131 DNA topoisomerase IC785_20875 PF01396 Topoisomerase DNA binding C4 zinc finger IC785_20950 PF13936 Helix-turn-helix domain IC785_20950 PF00665 Integrase core domain IC785_20955 PF01636 Phosphotransferase enzyme family IC785_20960 PF00665 Integrase core domain IC785_20960 PF13936 Helix-turn-helix domain IC785_21060 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IC785_21060 PF00437 Type II/IV secretion system protein IC785_21110 PF13614 AAA domain IC785_21115 PF17762 HTH domain found in ParB protein IC785_21115 PF02195 ParB-like nuclease domain IC785_21125 PF11799 impB/mucB/samB family C-terminal domain IC785_21125 PF00817 impB/mucB/samB family IC785_21125 PF13438 Domain of unknown function (DUF4113) IC785_21125 PF11798 IMS family HHH motif IC785_21130 PF00717 Peptidase S24-like IC785_21195 PF05973 Phage derived protein Gp49-like (DUF891) IC785_21230 PF05973 Phage derived protein Gp49-like (DUF891) IC785_21235 PF01740 STAS domain IC785_21235 PF00916 Sulfate permease family IC785_21250 PF00872 Transposase, Mutator family IC785_21255 PF03466 LysR substrate binding domain IC785_21255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IC785_21260 PF00107 Zinc-binding dehydrogenase IC785_21260 PF08240 Alcohol dehydrogenase GroES-like domain IC785_21265 PF14765 Polyketide synthase dehydratase IC785_21265 PF00550 Phosphopantetheine attachment site IC785_21265 PF00698 Acyl transferase domain IC785_21265 PF02801 Beta-ketoacyl synthase, C-terminal domain IC785_21265 PF00109 Beta-ketoacyl synthase, N-terminal domain IC785_21265 PF16197 Ketoacyl-synthetase C-terminal extension IC785_21265 PF08240 Alcohol dehydrogenase GroES-like domain IC785_21265 PF08659 KR domain IC785_21275 PF00892 EamA-like transporter family IC785_21280 PF00083 Sugar (and other) transporter IC785_21280 PF08946 Osmosensory transporter coiled coil IC785_21285 PF00557 Metallopeptidase family M24 IC785_21285 PF01321 Creatinase/Prolidase N-terminal domain IC785_21290 PF12833 Helix-turn-helix domain IC785_21290 PF01965 DJ-1/PfpI family IC785_21300 PF02583 Metal-sensitive transcriptional repressor IC785_21305 PF08240 Alcohol dehydrogenase GroES-like domain IC785_21305 PF00107 Zinc-binding dehydrogenase IC785_21310 PF00756 Putative esterase IC785_21325 PF00465 Iron-containing alcohol dehydrogenase IC785_21335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IC785_21345 PF16925 Tetracyclin repressor-like, C-terminal domain IC785_21345 PF00440 Bacterial regulatory proteins, tetR family IC785_21350 PF00107 Zinc-binding dehydrogenase IC785_21350 PF16884 N-terminal domain of oxidoreductase IC785_21360 PF04151 Bacterial pre-peptidase C-terminal domain IC785_21365 PF13356 Arm DNA-binding domain IC785_21365 PF00589 Phage integrase family IC785_21400 PF13737 Transposase DDE domain IC785_21410 PF12462 DNA helicase IV / RNA helicase N terminal IC785_21410 PF00580 UvrD/REP helicase N-terminal domain IC785_21410 PF13361 UvrD-like helicase C-terminal domain IC785_21430 PF00580 UvrD/REP helicase N-terminal domain IC785_21430 PF13361 UvrD-like helicase C-terminal domain IC785_21455 PF13610 DDE domain IC785_21465 PF02583 Metal-sensitive transcriptional repressor IC785_21475 PF00403 Heavy-metal-associated domain IC785_21525 PF13194 Domain of unknown function (DUF4010) IC785_21530 PF00512 His Kinase A (phospho-acceptor) domain IC785_21530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IC785_21530 PF00672 HAMP domain IC785_21535 PF00486 Transcriptional regulatory protein, C terminal IC785_21535 PF00072 Response regulator receiver domain IC785_21545 PF07732 Multicopper oxidase IC785_21545 PF07731 Multicopper oxidase IC785_21545 PF00394 Multicopper oxidase IC785_21565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IC785_21570 PF00873 AcrB/AcrD/AcrF family IC785_21580 PF07670 Nucleoside recognition IC785_21580 PF02421 Ferrous iron transport protein B IC785_21580 PF07664 Ferrous iron transport protein B C terminus IC785_21595 PF13411 MerR HTH family regulatory protein IC785_21605 PF13610 DDE domain IC785_21610 PF09278 MerR, DNA binding IC785_21610 PF00376 MerR family regulatory protein IC785_21615 PF02411 MerT mercuric transport protein IC785_21620 PF00403 Heavy-metal-associated domain IC785_21625 PF03203 MerC mercury resistance protein IC785_21630 PF07992 Pyridine nucleotide-disulphide oxidoreductase IC785_21630 PF00403 Heavy-metal-associated domain IC785_21630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IC785_21635 PF13411 MerR HTH family regulatory protein IC785_21640 PF05052 MerE protein IC785_21645 PF00563 EAL domain IC785_21645 PF11809 Domain of unknown function (DUF3330) IC785_21660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IC785_21700 PF02661 Fic/DOC family IC785_21730 PF06986 Type-1V conjugative transfer system mating pair stabilisation IC785_21735 PF09673 Type-F conjugative transfer system pilin assembly protein IC785_21740 PF06834 TraU protein IC785_21760 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer IC785_21770 PF13098 Thioredoxin-like domain IC785_21770 PF10411 Disulfide bond isomerase protein N-terminus IC785_21775 PF03743 Bacterial conjugation TrbI-like protein IC785_21825 PF18272 single-stranded DNA binding TraI N-terminal subdomain IC785_21825 PF07057 DNA helicase TraI IC785_21825 PF18340 DNA relaxase TraI 2B/2B-like domain IC785_21825 PF08751 TrwC relaxase IC785_21825 PF18272 single-stranded DNA binding TraI N-terminal subdomain IC785_21825 PF18340 DNA relaxase TraI 2B/2B-like domain IC785_21825 PF07057 DNA helicase TraI IC785_21825 PF08751 TrwC relaxase IC785_21830 PF12615 F sex factor protein N terminal IC785_21830 PF10412 Type IV secretion-system coupling protein DNA-binding domain IC785_21975 PF00565 Staphylococcal nuclease homologue IC785_22000 PF02796 Helix-turn-helix domain of resolvase IC785_22000 PF00239 Resolvase, N terminal domain IC785_22050 PF08535 KorB domain IC785_22050 PF06613 KorB C-terminal beta-barrel domain IC785_22050 PF02195 ParB-like nuclease domain IC785_22055 PF13614 AAA domain IC785_22120 PF00816 H-NS histone family IC785_22160 PF03432 Relaxase/Mobilisation nuclease domain IC785_22175 PF10706 Aminoglycoside-2''-adenylyltransferase IC785_22195 PF03432 Relaxase/Mobilisation nuclease domain