locus-tag class description BEN76_00010 PF04386 Stringent starvation protein B BEN76_00015 PF02798 Glutathione S-transferase, N-terminal domain BEN76_00015 PF00043 Glutathione S-transferase, C-terminal domain BEN76_00020 PF00380 Ribosomal protein S9/S16 BEN76_00025 PF00572 Ribosomal protein L13 BEN76_00030 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BEN76_00035 PF00398 Ribosomal RNA adenine dimethylase BEN76_00040 PF00149 Calcineurin-like phosphoesterase BEN76_00055 PF16360 GTP-binding GTPase Middle Region BEN76_00055 PF01926 50S ribosome-binding GTPase BEN76_00055 PF13167 GTP-binding GTPase N-terminal BEN76_00065 PF13091 PLD-like domain BEN76_00070 PF10518 TAT (twin-arginine translocation) pathway signal sequence BEN76_00070 PF00149 Calcineurin-like phosphoesterase BEN76_00080 PF07690 Major Facilitator Superfamily BEN76_00080 PF00083 Sugar (and other) transporter BEN76_00085 PF03006 Haemolysin-III related BEN76_00100 PF01734 Patatin-like phospholipase BEN76_00110 PF00378 Enoyl-CoA hydratase/isomerase BEN76_00110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN76_00110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN76_00115 PF00108 Thiolase, N-terminal domain BEN76_00115 PF02803 Thiolase, C-terminal domain BEN76_00120 PF12833 Helix-turn-helix domain BEN76_00120 PF02311 AraC-like ligand binding domain BEN76_00125 PF02515 CoA-transferase family III BEN76_00130 PF04966 Carbohydrate-selective porin, OprB family BEN76_00135 PF01011 PQQ enzyme repeat BEN76_00150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEN76_00150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEN76_00165 PF13404 AsnC-type helix-turn-helix domain BEN76_00165 PF01037 Lrp/AsnC ligand binding domain BEN76_00170 PF03814 Potassium-transporting ATPase A subunit BEN76_00180 PF02669 K+-transporting ATPase, c chain BEN76_00185 PF02702 Osmosensitive K+ channel His kinase sensor domain BEN76_00185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_00185 PF00512 His Kinase A (phospho-acceptor) domain BEN76_00185 PF13492 GAF domain BEN76_00185 PF13493 Domain of unknown function (DUF4118) BEN76_00190 PF00072 Response regulator receiver domain BEN76_00190 PF00486 Transcriptional regulatory protein, C terminal BEN76_00205 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BEN76_00210 PF00512 His Kinase A (phospho-acceptor) domain BEN76_00210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_00210 PF00672 HAMP domain BEN76_00215 PF00486 Transcriptional regulatory protein, C terminal BEN76_00215 PF00072 Response regulator receiver domain BEN76_00225 PF00576 HIUase/Transthyretin family BEN76_00230 PF13302 Acetyltransferase (GNAT) domain BEN76_00240 PF00324 Amino acid permease BEN76_00245 PF00348 Polyprenyl synthetase BEN76_00250 PF01145 SPFH domain / Band 7 family BEN76_00260 PF01734 Patatin-like phospholipase BEN76_00270 PF07690 Major Facilitator Superfamily BEN76_00275 PF00486 Transcriptional regulatory protein, C terminal BEN76_00275 PF00072 Response regulator receiver domain BEN76_00280 PF00512 His Kinase A (phospho-acceptor) domain BEN76_00280 PF08521 Two-component sensor kinase N-terminal BEN76_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_00290 PF00909 Ammonium Transporter Family BEN76_00325 PF10458 Valyl tRNA synthetase tRNA binding arm BEN76_00325 PF00133 tRNA synthetases class I (I, L, M and V) BEN76_00325 PF08264 Anticodon-binding domain of tRNA BEN76_00340 PF01906 Putative heavy-metal-binding BEN76_00345 PF01906 Putative heavy-metal-binding BEN76_00350 PF02321 Outer membrane efflux protein BEN76_00355 PF00873 AcrB/AcrD/AcrF family BEN76_00360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN76_00360 PF00529 HlyD membrane-fusion protein of T1SS BEN76_00365 PF01569 PAP2 superfamily BEN76_00375 PF00348 Polyprenyl synthetase BEN76_00380 PF00829 Ribosomal prokaryotic L21 protein BEN76_00385 PF01016 Ribosomal L27 protein BEN76_00390 PF03548 Outer membrane lipoprotein carrier protein LolA BEN76_00400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN76_00400 PF02403 Seryl-tRNA synthetase N-terminal domain BEN76_00405 PF10414 Sirohaem synthase dimerisation region BEN76_00405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEN76_00405 PF14824 Sirohaem biosynthesis protein central BEN76_00410 PF00588 SpoU rRNA Methylase family BEN76_00415 PF13520 Amino acid permease BEN76_00420 PF00465 Iron-containing alcohol dehydrogenase BEN76_00430 PF03099 Biotin/lipoate A/B protein ligase family BEN76_00435 PF04359 Protein of unknown function (DUF493) BEN76_00440 PF04545 Sigma-70, region 4 BEN76_00440 PF04539 Sigma-70 region 3 BEN76_00440 PF04542 Sigma-70 region 2 BEN76_00440 PF00140 Sigma-70 factor, region 1.2 BEN76_00440 PF03979 Sigma-70 factor, region 1.1 BEN76_00440 PF04546 Sigma-70, non-essential region BEN76_00455 PF05724 Thiopurine S-methyltransferase (TPMT) BEN76_00470 PF09335 SNARE associated Golgi protein BEN76_00490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BEN76_00495 PF02261 Aspartate decarboxylase BEN76_00500 PF01195 Peptidyl-tRNA hydrolase BEN76_00505 PF01386 Ribosomal L25p family BEN76_00510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BEN76_00510 PF14572 Phosphoribosyl synthetase-associated domain BEN76_00535 PF00288 GHMP kinases N terminal domain BEN76_00535 PF08544 GHMP kinases C terminal BEN76_00540 PF03550 Outer membrane lipoprotein LolB BEN76_00550 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BEN76_00550 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BEN76_00550 PF01488 Shikimate / quinate 5-dehydrogenase BEN76_00555 PF10410 DnaB-helicase binding domain of primase BEN76_00555 PF08275 DNA primase catalytic core, N-terminal domain BEN76_00555 PF01807 CHC2 zinc finger BEN76_00555 PF08278 DNA primase DnaG DnaB-binding BEN76_00560 PF13525 Outer membrane lipoprotein BEN76_00565 PF01479 S4 domain BEN76_00565 PF00849 RNA pseudouridylate synthase BEN76_00575 PF03358 NADPH-dependent FMN reductase BEN76_00580 PF01668 SmpB protein BEN76_00585 PF01467 Cytidylyltransferase-like BEN76_00590 PF00037 4Fe-4S binding domain BEN76_00620 PF02540 NAD synthase BEN76_00620 PF00795 Carbon-nitrogen hydrolase BEN76_00630 PF00285 Citrate synthase, C-terminal domain BEN76_00635 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BEN76_00640 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BEN76_00645 PF02910 Fumarate reductase flavoprotein C-term BEN76_00645 PF00890 FAD binding domain BEN76_00650 PF13085 2Fe-2S iron-sulfur cluster binding domain BEN76_00655 PF00676 Dehydrogenase E1 component BEN76_00655 PF16078 2-oxoglutarate dehydrogenase N-terminus BEN76_00655 PF02779 Transketolase, pyrimidine binding domain BEN76_00655 PF16870 2-oxoglutarate dehydrogenase C-terminal BEN76_00660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN76_00660 PF02817 e3 binding domain BEN76_00660 PF00364 Biotin-requiring enzyme BEN76_00665 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_00665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN76_00670 PF08442 ATP-grasp domain BEN76_00670 PF00549 CoA-ligase BEN76_00675 PF02629 CoA binding domain BEN76_00675 PF00549 CoA-ligase BEN76_00680 PF00579 tRNA synthetases class I (W and Y) BEN76_00685 PF05661 Protein of unknown function (DUF808) BEN76_00690 PF04228 Putative neutral zinc metallopeptidase BEN76_00700 PF00999 Sodium/hydrogen exchanger family BEN76_00710 PF00582 Universal stress protein family BEN76_00715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEN76_00720 PF03449 Transcription elongation factor, N-terminal BEN76_00720 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN76_00725 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEN76_00725 PF02142 MGS-like domain BEN76_00725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN76_00730 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BEN76_00730 PF00117 Glutamine amidotransferase class-I BEN76_00745 PF01985 CRS1 / YhbY (CRM) domain BEN76_00750 PF01728 FtsJ-like methyltransferase BEN76_00755 PF01434 Peptidase family M41 BEN76_00755 PF06480 FtsH Extracellular BEN76_00755 PF00004 ATPase family associated with various cellular activities (AAA) BEN76_00755 PF17862 AAA+ lid domain BEN76_00760 PF00809 Pterin binding enzyme BEN76_00775 PF02595 Glycerate kinase family BEN76_00790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BEN76_00790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BEN76_00805 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BEN76_00805 PF01266 FAD dependent oxidoreductase BEN76_00810 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BEN76_00810 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BEN76_00815 PF00781 Diacylglycerol kinase catalytic domain BEN76_00825 PF00166 Chaperonin 10 Kd subunit BEN76_00830 PF00118 TCP-1/cpn60 chaperonin family BEN76_00835 PF01219 Prokaryotic diacylglycerol kinase BEN76_00840 PF00873 AcrB/AcrD/AcrF family BEN76_00845 PF03448 MgtE intracellular N domain BEN76_00845 PF00571 CBS domain BEN76_00845 PF01769 Divalent cation transporter BEN76_00855 PF01435 Peptidase family M48 BEN76_00860 PF01464 Transglycosylase SLT domain BEN76_00865 PF01171 PP-loop family BEN76_00875 PF01464 Transglycosylase SLT domain BEN76_00875 PF00497 Bacterial extracellular solute-binding proteins, family 3 BEN76_00880 PF03449 Transcription elongation factor, N-terminal BEN76_00880 PF01272 Transcription elongation factor, GreA/GreB, C-term BEN76_00890 PF00440 Bacterial regulatory proteins, tetR family BEN76_00890 PF13977 BetI-type transcriptional repressor, C-terminal BEN76_00900 PF14537 Cytochrome c3 BEN76_00900 PF00890 FAD binding domain BEN76_00905 PF03466 LysR substrate binding domain BEN76_00905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_00915 PF07690 Major Facilitator Superfamily BEN76_00925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEN76_00930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_00930 PF03466 LysR substrate binding domain BEN76_00940 PF07690 Major Facilitator Superfamily BEN76_00945 PF00456 Transketolase, thiamine diphosphate binding domain BEN76_00950 PF02780 Transketolase, C-terminal domain BEN76_00950 PF02779 Transketolase, pyrimidine binding domain BEN76_00955 PF00392 Bacterial regulatory proteins, gntR family BEN76_00955 PF07729 FCD domain BEN76_00965 PF00285 Citrate synthase, C-terminal domain BEN76_00970 PF00330 Aconitase family (aconitate hydratase) BEN76_00970 PF00694 Aconitase C-terminal domain BEN76_00990 PF00561 alpha/beta hydrolase fold BEN76_01005 PF01810 LysE type translocator BEN76_01010 PF03466 LysR substrate binding domain BEN76_01010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_01015 PF00440 Bacterial regulatory proteins, tetR family BEN76_01015 PF16925 Tetracyclin repressor-like, C-terminal domain BEN76_01025 PF08240 Alcohol dehydrogenase GroES-like domain BEN76_01025 PF00107 Zinc-binding dehydrogenase BEN76_01030 PF04403 Paraquat-inducible protein A BEN76_01035 PF04403 Paraquat-inducible protein A BEN76_01040 PF02470 MlaD protein BEN76_01060 PF00717 Peptidase S24-like BEN76_01065 PF11799 impB/mucB/samB family C-terminal domain BEN76_01065 PF00817 impB/mucB/samB family BEN76_01065 PF13438 Domain of unknown function (DUF4113) BEN76_01065 PF11798 IMS family HHH motif BEN76_01070 PF04303 PrpF protein BEN76_01100 PF07724 AAA domain (Cdc48 subfamily) BEN76_01100 PF00004 ATPase family associated with various cellular activities (AAA) BEN76_01100 PF17871 AAA lid domain BEN76_01100 PF10431 C-terminal, D2-small domain, of ClpB protein BEN76_01155 PF00691 OmpA family BEN76_01165 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEN76_01165 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEN76_01170 PF12833 Helix-turn-helix domain BEN76_01170 PF14525 AraC-binding-like domain BEN76_01175 PF01738 Dienelactone hydrolase family BEN76_01190 PF01613 Flavin reductase like domain BEN76_01200 PF14525 AraC-binding-like domain BEN76_01200 PF12833 Helix-turn-helix domain BEN76_01205 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN76_01205 PF00175 Oxidoreductase NAD-binding domain BEN76_01205 PF00970 Oxidoreductase FAD-binding domain BEN76_01210 PF00866 Ring hydroxylating beta subunit BEN76_01215 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BEN76_01215 PF00355 Rieske [2Fe-2S] domain BEN76_01225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN76_01225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN76_01225 PF11890 Domain of unknown function (DUF3410) BEN76_01230 PF00152 tRNA synthetases class II (D, K and N) BEN76_01240 PF18073 Rubredoxin metal binding domain BEN76_01245 PF01235 Sodium:alanine symporter family BEN76_01250 PF00324 Amino acid permease BEN76_01260 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BEN76_01260 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BEN76_01265 PF01678 Diaminopimelate epimerase BEN76_01270 PF00561 alpha/beta hydrolase fold BEN76_01275 PF01810 LysE type translocator BEN76_01280 PF00589 Phage integrase family BEN76_01280 PF02899 Phage integrase, N-terminal SAM-like domain BEN76_01285 PF01012 Electron transfer flavoprotein domain BEN76_01290 PF00766 Electron transfer flavoprotein FAD-binding domain BEN76_01290 PF01012 Electron transfer flavoprotein domain BEN76_01295 PF00521 DNA gyrase/topoisomerase IV, subunit A BEN76_01295 PF03989 DNA gyrase C-terminal domain, beta-propeller BEN76_01310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN76_01320 PF00266 Aminotransferase class-V BEN76_01330 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BEN76_01340 PF12704 MacB-like periplasmic core domain BEN76_01340 PF02687 FtsX-like permease family BEN76_01345 PF00005 ABC transporter BEN76_01350 PF00753 Metallo-beta-lactamase superfamily BEN76_01350 PF03772 Competence protein BEN76_01350 PF13567 Domain of unknown function (DUF4131) BEN76_01360 PF01343 Peptidase family S49 BEN76_01360 PF06965 Na+/H+ antiporter 1 BEN76_01365 PF12697 Alpha/beta hydrolase family BEN76_01370 PF00551 Formyl transferase BEN76_01375 PF00586 AIR synthase related protein, N-terminal domain BEN76_01375 PF02769 AIR synthase related protein, C-terminal domain BEN76_01380 PF01594 AI-2E family transporter BEN76_01385 PF11638 DnaA N-terminal domain BEN76_01385 PF00308 Bacterial dnaA protein BEN76_01385 PF08299 Bacterial dnaA protein helix-turn-helix BEN76_01415 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEN76_01415 PF00588 SpoU rRNA Methylase family BEN76_01420 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BEN76_01430 PF00691 OmpA family BEN76_01435 PF07676 WD40-like Beta Propeller Repeat BEN76_01435 PF04052 TolB amino-terminal domain BEN76_01445 PF02472 Biopolymer transport protein ExbD/TolR BEN76_01450 PF01618 MotA/TolQ/ExbB proton channel family BEN76_01455 PF03061 Thioesterase superfamily BEN76_01460 PF01546 Peptidase family M20/M25/M40 BEN76_01460 PF07687 Peptidase dimerisation domain BEN76_01465 PF05496 Holliday junction DNA helicase RuvB P-loop domain BEN76_01465 PF17864 RuvB AAA lid domain BEN76_01465 PF05491 RuvB C-terminal winged helix domain BEN76_01470 PF01330 RuvA N terminal domain BEN76_01470 PF07499 RuvA, C-terminal domain BEN76_01475 PF01966 HD domain BEN76_01480 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BEN76_01480 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BEN76_01480 PF02769 AIR synthase related protein, C-terminal domain BEN76_01490 PF01784 NIF3 (NGG1p interacting factor 3) BEN76_01500 PF00378 Enoyl-CoA hydratase/isomerase BEN76_01505 PF01467 Cytidylyltransferase-like BEN76_01505 PF00293 NUDIX domain BEN76_01510 PF00578 AhpC/TSA family BEN76_01520 PF06508 Queuosine biosynthesis protein QueC BEN76_01525 PF04055 Radical SAM superfamily BEN76_01530 PF00132 Bacterial transferase hexapeptide (six repeats) BEN76_01530 PF14602 Hexapeptide repeat of succinyl-transferase BEN76_01530 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BEN76_01540 PF03466 LysR substrate binding domain BEN76_01540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_01545 PF00005 ABC transporter BEN76_01545 PF12857 TOBE-like domain BEN76_01550 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_01555 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_01570 PF01063 Amino-transferase class IV BEN76_01575 PF02618 YceG-like family BEN76_01580 PF02223 Thymidylate kinase BEN76_01585 PF02910 Fumarate reductase flavoprotein C-term BEN76_01585 PF00890 FAD binding domain BEN76_01590 PF17820 PDZ domain BEN76_01590 PF13180 PDZ domain BEN76_01595 PF00120 Glutamine synthetase, catalytic domain BEN76_01605 PF00009 Elongation factor Tu GTP binding domain BEN76_01605 PF03144 Elongation factor Tu domain 2 BEN76_01605 PF06421 GTP-binding protein LepA C-terminus BEN76_01605 PF00679 Elongation factor G C-terminus BEN76_01610 PF10502 Signal peptidase, peptidase S26 BEN76_01620 PF00035 Double-stranded RNA binding motif BEN76_01620 PF14622 Ribonuclease-III-like BEN76_01625 PF01926 50S ribosome-binding GTPase BEN76_01625 PF07650 KH domain BEN76_01635 PF02565 Recombination protein O C terminal BEN76_01635 PF11967 Recombination protein O N terminal BEN76_01640 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BEN76_01645 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BEN76_01670 PF13185 GAF domain BEN76_01670 PF00563 EAL domain BEN76_01670 PF00990 Diguanylate cyclase, GGDEF domain BEN76_01685 PF04851 Type III restriction enzyme, res subunit BEN76_01685 PF02151 UvrB/uvrC motif BEN76_01685 PF12344 Ultra-violet resistance protein B BEN76_01685 PF17757 UvrB interaction domain BEN76_01685 PF00271 Helicase conserved C-terminal domain BEN76_01695 PF00892 EamA-like transporter family BEN76_01700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEN76_01700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEN76_01715 PF01926 50S ribosome-binding GTPase BEN76_01715 PF01018 GTP1/OBG BEN76_01720 PF00696 Amino acid kinase family BEN76_01720 PF01472 PUA domain BEN76_01730 PF07759 Protein of unknown function (DUF1615) BEN76_01865 PF06381 Protein of unknown function (DUF1073) BEN76_02000 PF11798 IMS family HHH motif BEN76_02000 PF13438 Domain of unknown function (DUF4113) BEN76_02000 PF11799 impB/mucB/samB family C-terminal domain BEN76_02000 PF00817 impB/mucB/samB family BEN76_02010 PF00589 Phage integrase family BEN76_02015 PF01207 Dihydrouridine synthase (Dus) BEN76_02020 PF00440 Bacterial regulatory proteins, tetR family BEN76_02030 PF03060 Nitronate monooxygenase BEN76_02040 PF00551 Formyl transferase BEN76_02045 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BEN76_02045 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BEN76_02050 PF01266 FAD dependent oxidoreductase BEN76_02055 PF04267 Sarcosine oxidase, delta subunit family BEN76_02060 PF01571 Aminomethyltransferase folate-binding domain BEN76_02060 PF17806 Sarcosine oxidase A3 domain BEN76_02060 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_02060 PF08669 Glycine cleavage T-protein C-terminal barrel domain BEN76_02075 PF07729 FCD domain BEN76_02075 PF00392 Bacterial regulatory proteins, gntR family BEN76_02085 PF12697 Alpha/beta hydrolase family BEN76_02090 PF01613 Flavin reductase like domain BEN76_02095 PF00296 Luciferase-like monooxygenase BEN76_02100 PF00171 Aldehyde dehydrogenase family BEN76_02105 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BEN76_02115 PF00171 Aldehyde dehydrogenase family BEN76_02120 PF02627 Carboxymuconolactone decarboxylase family BEN76_02125 PF00909 Ammonium Transporter Family BEN76_02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_02130 PF03466 LysR substrate binding domain BEN76_02135 PF07690 Major Facilitator Superfamily BEN76_02145 PF00120 Glutamine synthetase, catalytic domain BEN76_02155 PF01493 GXGXG motif BEN76_02160 PF01645 Conserved region in glutamate synthase BEN76_02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_02165 PF03466 LysR substrate binding domain BEN76_02170 PF01566 Natural resistance-associated macrophage protein BEN76_02175 PF03746 LamB/YcsF family BEN76_02180 PF07286 Protein of unknown function (DUF1445) BEN76_02190 PF02785 Biotin carboxylase C-terminal domain BEN76_02190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN76_02190 PF00364 Biotin-requiring enzyme BEN76_02190 PF00289 Biotin carboxylase, N-terminal domain BEN76_02195 PF02803 Thiolase, C-terminal domain BEN76_02195 PF00108 Thiolase, N-terminal domain BEN76_02200 PF02667 Short chain fatty acid transporter BEN76_02205 PF01144 Coenzyme A transferase BEN76_02210 PF01144 Coenzyme A transferase BEN76_02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_02215 PF03466 LysR substrate binding domain BEN76_02230 PF01244 Membrane dipeptidase (Peptidase family M19) BEN76_02235 PF13186 Iron-sulfur cluster-binding domain BEN76_02235 PF04055 Radical SAM superfamily BEN76_02240 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BEN76_02245 PF03070 TENA/THI-4/PQQC family BEN76_02250 PF12706 Beta-lactamase superfamily domain BEN76_02255 PF08042 PqqA family BEN76_02265 PF00512 His Kinase A (phospho-acceptor) domain BEN76_02265 PF09308 LuxQ, periplasmic BEN76_02265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_02265 PF00072 Response regulator receiver domain BEN76_02270 PF00072 Response regulator receiver domain BEN76_02275 PF17954 Quercetinase C-terminal cupin domain BEN76_02275 PF02678 Pirin BEN76_02285 PF01208 Uroporphyrinogen decarboxylase (URO-D) BEN76_02290 PF05675 Protein of unknown function (DUF817) BEN76_02295 PF09335 SNARE associated Golgi protein BEN76_02305 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BEN76_02305 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BEN76_02305 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN76_02305 PF01799 [2Fe-2S] binding domain BEN76_02310 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BEN76_02310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BEN76_02315 PF02625 XdhC and CoxI family BEN76_02315 PF13478 XdhC Rossmann domain BEN76_02325 PF00218 Indole-3-glycerol phosphate synthase BEN76_02330 PF00591 Glycosyl transferase family, a/b domain BEN76_02330 PF02885 Glycosyl transferase family, helical bundle domain BEN76_02335 PF00117 Glutamine amidotransferase class-I BEN76_02340 PF00892 EamA-like transporter family BEN76_02355 PF04345 Chorismate lyase BEN76_02360 PF01040 UbiA prenyltransferase family BEN76_02370 PF00753 Metallo-beta-lactamase superfamily BEN76_02370 PF16123 Hydroxyacylglutathione hydrolase C-terminus BEN76_02375 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_02380 PF00005 ABC transporter BEN76_02380 PF09383 NIL domain BEN76_02385 PF03180 NLPA lipoprotein BEN76_02390 PF02843 Phosphoribosylglycinamide synthetase, C domain BEN76_02390 PF02844 Phosphoribosylglycinamide synthetase, N domain BEN76_02390 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BEN76_02395 PF02142 MGS-like domain BEN76_02395 PF01808 AICARFT/IMPCHase bienzyme BEN76_02400 PF02954 Bacterial regulatory protein, Fis family BEN76_02425 PF01134 Glucose inhibited division protein A BEN76_02425 PF13932 GidA associated domain BEN76_02435 PF14403 Circularly permuted ATP-grasp type 2 BEN76_02445 PF08379 Bacterial transglutaminase-like N-terminal region BEN76_02445 PF01841 Transglutaminase-like superfamily BEN76_02455 PF01168 Alanine racemase, N-terminal domain BEN76_02455 PF00842 Alanine racemase, C-terminal domain BEN76_02460 PF03796 DnaB-like helicase C terminal domain BEN76_02460 PF00772 DnaB-like helicase N terminal domain BEN76_02465 PF05154 TM2 domain BEN76_02470 PF01281 Ribosomal protein L9, N-terminal domain BEN76_02470 PF03948 Ribosomal protein L9, C-terminal domain BEN76_02475 PF01084 Ribosomal protein S18 BEN76_02480 PF01250 Ribosomal protein S6 BEN76_02485 PF01040 UbiA prenyltransferase family BEN76_02490 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BEN76_02495 PF00510 Cytochrome c oxidase subunit III BEN76_02500 PF00115 Cytochrome C and Quinol oxidase polypeptide I BEN76_02505 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BEN76_02505 PF06481 COX Aromatic Rich Motif BEN76_02515 PF00391 PEP-utilising enzyme, mobile domain BEN76_02515 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BEN76_02515 PF02896 PEP-utilising enzyme, TIM barrel domain BEN76_02520 PF03618 Kinase/pyrophosphorylase BEN76_02525 PF03707 Bacterial signalling protein N terminal repeat BEN76_02525 PF00990 Diguanylate cyclase, GGDEF domain BEN76_02525 PF00563 EAL domain BEN76_02530 PF00296 Luciferase-like monooxygenase BEN76_02540 PF03462 PCRF domain BEN76_02540 PF00472 RF-1 domain BEN76_02545 PF13847 Methyltransferase domain BEN76_02545 PF17827 PrmC N-terminal domain BEN76_02555 PF00106 short chain dehydrogenase BEN76_02560 PF00501 AMP-binding enzyme BEN76_02560 PF13193 AMP-binding enzyme C-terminal domain BEN76_02565 PF01613 Flavin reductase like domain BEN76_02570 PF09924 Uncharacterised conserved protein (DUF2156) BEN76_02570 PF03706 Lysylphosphatidylglycerol synthase TM region BEN76_02575 PF00899 ThiF family BEN76_02580 PF03109 ABC1 family BEN76_02585 PF02152 Dihydroneopterin aldolase BEN76_02595 PF03232 Ubiquinone biosynthesis protein COQ7 BEN76_02600 PF07690 Major Facilitator Superfamily BEN76_02605 PF17243 POTRA domain TamA domain 1 BEN76_02605 PF07244 Surface antigen variable number repeat BEN76_02605 PF01103 Surface antigen BEN76_02620 PF00403 Heavy-metal-associated domain BEN76_02625 PF02583 Metal-sensitive transcriptional repressor BEN76_02635 PF06434 Aconitate hydratase 2 N-terminus BEN76_02635 PF11791 Aconitate B N-terminal domain BEN76_02635 PF00330 Aconitase family (aconitate hydratase) BEN76_02640 PF01037 Lrp/AsnC ligand binding domain BEN76_02645 PF00294 pfkB family carbohydrate kinase BEN76_02655 PF07662 Na+ dependent nucleoside transporter C-terminus BEN76_02655 PF01773 Na+ dependent nucleoside transporter N-terminus BEN76_02665 PF01156 Inosine-uridine preferring nucleoside hydrolase BEN76_02670 PF07690 Major Facilitator Superfamily BEN76_02675 PF03466 LysR substrate binding domain BEN76_02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_02680 PF04284 Protein of unknown function (DUF441) BEN76_02685 PF01479 S4 domain BEN76_02685 PF00849 RNA pseudouridylate synthase BEN76_02700 PF01479 S4 domain BEN76_02700 PF00849 RNA pseudouridylate synthase BEN76_02705 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BEN76_02710 PF01119 DNA mismatch repair protein, C-terminal domain BEN76_02710 PF08676 MutL C terminal dimerisation domain BEN76_02720 PF17209 Hfq protein BEN76_02725 PF00639 PPIC-type PPIASE domain BEN76_02725 PF09312 SurA N-terminal domain BEN76_02730 PF04453 LPS transport system D BEN76_02730 PF03968 OstA-like protein BEN76_02735 PF01636 Phosphotransferase enzyme family BEN76_02740 PF00483 Nucleotidyl transferase BEN76_02745 PF02527 rRNA small subunit methyltransferase G BEN76_02750 PF13614 AAA domain BEN76_02755 PF17762 HTH domain found in ParB protein BEN76_02755 PF02195 ParB-like nuclease domain BEN76_02760 PF00005 ABC transporter BEN76_02760 PF00664 ABC transporter transmembrane region BEN76_02765 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BEN76_02770 PF02348 Cytidylyltransferase BEN76_02775 PF09115 DNA polymerase III, delta subunit, C terminal BEN76_02785 PF01026 TatD related DNase BEN76_02795 PF07963 Prokaryotic N-terminal methylation motif BEN76_02795 PF08334 Type II secretion system (T2SS), protein G BEN76_02800 PF07963 Prokaryotic N-terminal methylation motif BEN76_02800 PF02501 Type II secretion system (T2SS), protein I BEN76_02805 PF11612 Type II secretion system (T2SS), protein J BEN76_02805 PF07963 Prokaryotic N-terminal methylation motif BEN76_02810 PF03934 Type II secretion system (T2SS), protein K BEN76_02820 PF03167 Uracil DNA glycosylase superfamily BEN76_02830 PF14437 MafB19-like deaminase BEN76_02840 PF02224 Cytidylate kinase BEN76_02845 PF00575 S1 RNA binding domain BEN76_02850 PF00216 Bacterial DNA-binding protein BEN76_02875 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BEN76_02880 PF03956 Lysine exporter LysO BEN76_02885 PF00743 Flavin-binding monooxygenase-like BEN76_02890 PF12833 Helix-turn-helix domain BEN76_02895 PF03969 AFG1-like ATPase BEN76_02900 PF01274 Malate synthase BEN76_02930 PF00929 Exonuclease BEN76_02950 PF01381 Helix-turn-helix BEN76_02950 PF00717 Peptidase S24-like BEN76_03175 PF13438 Domain of unknown function (DUF4113) BEN76_03175 PF00817 impB/mucB/samB family BEN76_03175 PF11799 impB/mucB/samB family C-terminal domain BEN76_03180 PF00717 Peptidase S24-like BEN76_03190 PF13356 Arm DNA-binding domain BEN76_03190 PF00589 Phage integrase family BEN76_03205 PF03741 Integral membrane protein TerC family BEN76_03205 PF03471 Transporter associated domain BEN76_03210 PF00793 DAHP synthetase I family BEN76_03215 PF01925 Sulfite exporter TauE/SafE BEN76_03235 PF00593 TonB dependent receptor BEN76_03235 PF07715 TonB-dependent Receptor Plug Domain BEN76_03240 PF02684 Lipid-A-disaccharide synthetase BEN76_03265 PF01230 HIT domain BEN76_03280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEN76_03280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEN76_03290 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN76_03295 PF02575 YbaB/EbfC DNA-binding family BEN76_03300 PF13662 Toprim domain BEN76_03300 PF02132 RecR protein BEN76_03305 PF01612 3'-5' exonuclease BEN76_03305 PF00570 HRDC domain BEN76_03310 PF05166 YcgL domain BEN76_03320 PF01434 Peptidase family M41 BEN76_03320 PF17862 AAA+ lid domain BEN76_03320 PF00004 ATPase family associated with various cellular activities (AAA) BEN76_03330 PF00571 CBS domain BEN76_03360 PF05193 Peptidase M16 inactive domain BEN76_03360 PF00675 Insulinase (Peptidase family M16) BEN76_03365 PF02881 SRP54-type protein, helical bundle domain BEN76_03365 PF00448 SRP54-type protein, GTPase domain BEN76_03385 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) BEN76_03390 PF08173 Membrane bound YbgT-like protein BEN76_03395 PF02322 Cytochrome bd terminal oxidase subunit II BEN76_03400 PF01654 Cytochrome bd terminal oxidase subunit I BEN76_03410 PF01743 Poly A polymerase head domain BEN76_03410 PF12627 Probable RNA and SrmB- binding site of polymerase A BEN76_03415 PF01515 Phosphate acetyl/butaryl transferase BEN76_03415 PF03949 Malic enzyme, NAD binding domain BEN76_03415 PF00390 Malic enzyme, N-terminal domain BEN76_03420 PF04452 RNA methyltransferase BEN76_03425 PF02219 Methylenetetrahydrofolate reductase BEN76_03430 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BEN76_03430 PF05221 S-adenosyl-L-homocysteine hydrolase BEN76_03440 PF00083 Sugar (and other) transporter BEN76_03440 PF08946 Osmosensory transporter coiled coil BEN76_03445 PF00990 Diguanylate cyclase, GGDEF domain BEN76_03455 PF09317 Domain of unknown function (DUF1974) BEN76_03455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_03455 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_03455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_03460 PF04055 Radical SAM superfamily BEN76_03465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN76_03465 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_03470 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BEN76_03480 PF00557 Metallopeptidase family M24 BEN76_03485 PF00318 Ribosomal protein S2 BEN76_03490 PF00889 Elongation factor TS BEN76_03505 PF03330 Lytic transglycolase BEN76_03505 PF05036 Sporulation related domain BEN76_03510 PF13406 Transglycosylase SLT domain BEN76_03515 PF01098 Cell cycle protein BEN76_03525 PF14489 QueF-like protein BEN76_03525 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BEN76_03530 PF01061 ABC-2 type transporter BEN76_03535 PF00005 ABC transporter BEN76_03570 PF01292 Prokaryotic cytochrome b561 BEN76_03590 PF00929 Exonuclease BEN76_03600 PF00464 Serine hydroxymethyltransferase BEN76_03610 PF05816 Toxic anion resistance protein (TelA) BEN76_03620 PF13192 Thioredoxin domain BEN76_03620 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_03625 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BEN76_03630 PF13333 Integrase core domain BEN76_03630 PF00665 Integrase core domain BEN76_03630 PF13276 HTH-like domain BEN76_03640 PF00970 Oxidoreductase FAD-binding domain BEN76_03640 PF00175 Oxidoreductase NAD-binding domain BEN76_03645 PF01980 tRNA-methyltransferase O BEN76_03645 PF18389 TrmO C-terminal domain BEN76_03650 PF13185 GAF domain BEN76_03650 PF00990 Diguanylate cyclase, GGDEF domain BEN76_03655 PF00437 Type II/IV secretion system protein BEN76_03665 PF00486 Transcriptional regulatory protein, C terminal BEN76_03665 PF00072 Response regulator receiver domain BEN76_03670 PF00512 His Kinase A (phospho-acceptor) domain BEN76_03670 PF08521 Two-component sensor kinase N-terminal BEN76_03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_03680 PF00293 NUDIX domain BEN76_03690 PF00905 Penicillin binding protein transpeptidase domain BEN76_03690 PF00912 Transglycosylase BEN76_03690 PF14814 Bifunctional transglycosylase second domain BEN76_03695 PF01513 ATP-NAD kinase BEN76_03700 PF07023 Protein of unknown function (DUF1315) BEN76_03710 PF00375 Sodium:dicarboxylate symporter family BEN76_03715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_03715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_03715 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_03720 PF01965 DJ-1/PfpI family BEN76_03730 PF00800 Prephenate dehydratase BEN76_03730 PF01817 Chorismate mutase type II BEN76_03730 PF01842 ACT domain BEN76_03735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEN76_03745 PF07687 Peptidase dimerisation domain BEN76_03745 PF01546 Peptidase family M20/M25/M40 BEN76_03755 PF03883 Peroxide stress protein YaaA BEN76_03760 PF13654 AAA domain BEN76_03760 PF05362 Lon protease (S16) C-terminal proteolytic domain BEN76_03765 PF07690 Major Facilitator Superfamily BEN76_03770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEN76_03775 PF13593 SBF-like CPA transporter family (DUF4137) BEN76_03780 PF01197 Ribosomal protein L31 BEN76_03795 PF04055 Radical SAM superfamily BEN76_03800 PF01132 Elongation factor P (EF-P) OB domain BEN76_03800 PF08207 Elongation factor P (EF-P) KOW-like domain BEN76_03800 PF09285 Elongation factor P, C-terminal BEN76_03805 PF02554 Carbon starvation protein CstA BEN76_03805 PF13722 5TM C-terminal transporter carbon starvation CstA BEN76_03810 PF04328 Selenoprotein, putative BEN76_03815 PF07726 ATPase family associated with various cellular activities (AAA) BEN76_03815 PF17863 AAA lid domain BEN76_03825 PF13559 Domain of unknown function (DUF4129) BEN76_03825 PF11992 Domain of unknown function (DUF3488) BEN76_03825 PF01841 Transglutaminase-like superfamily BEN76_03845 PF04865 Baseplate J-like protein BEN76_03930 PF10124 Mu-like prophage major head subunit gpT BEN76_03950 PF04233 Phage Mu protein F like protein BEN76_03955 PF06074 Protein of unknown function (DUF935) BEN76_03980 PF03237 Terminase-like family BEN76_04025 PF00216 Bacterial DNA-binding protein BEN76_04110 PF00106 short chain dehydrogenase BEN76_04120 PF13333 Integrase core domain BEN76_04120 PF00665 Integrase core domain BEN76_04120 PF13276 HTH-like domain BEN76_04125 PF00578 AhpC/TSA family BEN76_04125 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEN76_04130 PF00271 Helicase conserved C-terminal domain BEN76_04130 PF04408 Helicase associated domain (HA2) BEN76_04130 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BEN76_04130 PF11898 Domain of unknown function (DUF3418) BEN76_04130 PF00270 DEAD/DEAH box helicase BEN76_04135 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BEN76_04135 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BEN76_04140 PF07690 Major Facilitator Superfamily BEN76_04155 PF03466 LysR substrate binding domain BEN76_04155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_04190 PF00313 'Cold-shock' DNA-binding domain BEN76_04200 PF09190 DALR domain BEN76_04200 PF01406 tRNA synthetases class I (C) catalytic domain BEN76_04205 PF00571 CBS domain BEN76_04205 PF01380 SIS domain BEN76_04220 PF03968 OstA-like protein BEN76_04225 PF12399 Branched-chain amino acid ATP-binding cassette transporter BEN76_04225 PF00005 ABC transporter BEN76_04230 PF02321 Outer membrane efflux protein BEN76_04235 PF00005 ABC transporter BEN76_04235 PF00664 ABC transporter transmembrane region BEN76_04240 PF13533 Biotin-lipoyl like BEN76_04245 PF01205 Uncharacterized protein family UPF0029 BEN76_04265 PF01596 O-methyltransferase BEN76_04275 PF00037 4Fe-4S binding domain BEN76_04275 PF11953 Domain of unknown function (DUF3470) BEN76_04285 PF05190 MutS family domain IV BEN76_04285 PF05192 MutS domain III BEN76_04285 PF00488 MutS domain V BEN76_04285 PF01624 MutS domain I BEN76_04285 PF05188 MutS domain II BEN76_04310 PF16957 Malonate decarboxylase, alpha subunit, transporter BEN76_04315 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BEN76_04320 PF06857 Malonate decarboxylase delta subunit (MdcD) BEN76_04325 PF01039 Carboxyl transferase domain BEN76_04335 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BEN76_04340 PF00698 Acyl transferase domain BEN76_04355 PF03466 LysR substrate binding domain BEN76_04355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_04395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_04395 PF08521 Two-component sensor kinase N-terminal BEN76_04395 PF00512 His Kinase A (phospho-acceptor) domain BEN76_04400 PF00072 Response regulator receiver domain BEN76_04400 PF00486 Transcriptional regulatory protein, C terminal BEN76_04425 PF02673 Bacitracin resistance protein BacA BEN76_04440 PF05958 tRNA (Uracil-5-)-methyltransferase BEN76_04445 PF14850 DNA-binding domain of Proline dehydrogenase BEN76_04445 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BEN76_04445 PF01619 Proline dehydrogenase BEN76_04445 PF00171 Aldehyde dehydrogenase family BEN76_04450 PF01037 Lrp/AsnC ligand binding domain BEN76_04455 PF00474 Sodium:solute symporter family BEN76_04460 PF02146 Sir2 family BEN76_04465 PF00083 Sugar (and other) transporter BEN76_04480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN76_04480 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_04490 PF03466 LysR substrate binding domain BEN76_04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_04495 PF02824 TGS domain BEN76_04495 PF04607 Region found in RelA / SpoT proteins BEN76_04495 PF13291 ACT domain BEN76_04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_04505 PF03466 LysR substrate binding domain BEN76_04510 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_04510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_04510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_04545 PF00291 Pyridoxal-phosphate dependent enzyme BEN76_04575 PF00782 Dual specificity phosphatase, catalytic domain BEN76_04580 PF12147 Putative methyltransferase BEN76_04580 PF12146 Serine aminopeptidase, S33 BEN76_04585 PF01066 CDP-alcohol phosphatidyltransferase BEN76_04590 PF04073 Aminoacyl-tRNA editing domain BEN76_04600 PF01232 Mannitol dehydrogenase Rossmann domain BEN76_04600 PF08125 Mannitol dehydrogenase C-terminal domain BEN76_04610 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BEN76_04615 PF02277 Phosphoribosyltransferase BEN76_04620 PF00300 Histidine phosphatase superfamily (branch 1) BEN76_04625 PF02654 Cobalamin-5-phosphate synthase BEN76_04630 PF04172 LrgB-like family BEN76_04635 PF03788 LrgA family BEN76_04640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_04640 PF03466 LysR substrate binding domain BEN76_04645 PF04143 Sulphur transport BEN76_04655 PF00753 Metallo-beta-lactamase superfamily BEN76_04665 PF07690 Major Facilitator Superfamily BEN76_04670 PF02515 CoA-transferase family III BEN76_04675 PF09339 IclR helix-turn-helix domain BEN76_04680 PF07690 Major Facilitator Superfamily BEN76_04685 PF02515 CoA-transferase family III BEN76_04690 PF09339 IclR helix-turn-helix domain BEN76_04695 PF02803 Thiolase, C-terminal domain BEN76_04695 PF00108 Thiolase, N-terminal domain BEN76_04700 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BEN76_04700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN76_04700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN76_04705 PF00378 Enoyl-CoA hydratase/isomerase BEN76_04710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_04710 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_04710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_04715 PF07690 Major Facilitator Superfamily BEN76_04720 PF07690 Major Facilitator Superfamily BEN76_04725 PF01144 Coenzyme A transferase BEN76_04730 PF01144 Coenzyme A transferase BEN76_04740 PF07690 Major Facilitator Superfamily BEN76_04750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_04750 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN76_04750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_04750 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_04755 PF09339 IclR helix-turn-helix domain BEN76_04755 PF01614 Bacterial transcriptional regulator BEN76_04760 PF01144 Coenzyme A transferase BEN76_04765 PF01144 Coenzyme A transferase BEN76_04770 PF00108 Thiolase, N-terminal domain BEN76_04770 PF02803 Thiolase, C-terminal domain BEN76_04775 PF10397 Adenylosuccinate lyase C-terminus BEN76_04775 PF00206 Lyase BEN76_04780 PF00561 alpha/beta hydrolase fold BEN76_04785 PF07690 Major Facilitator Superfamily BEN76_04790 PF02627 Carboxymuconolactone decarboxylase family BEN76_04795 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BEN76_04795 PF00775 Dioxygenase BEN76_04800 PF00775 Dioxygenase BEN76_04810 PF05048 Periplasmic copper-binding protein (NosD) BEN76_04815 PF04966 Carbohydrate-selective porin, OprB family BEN76_04820 PF13360 PQQ-like domain BEN76_04820 PF01011 PQQ enzyme repeat BEN76_04825 PF10011 Predicted membrane protein (DUF2254) BEN76_04830 PF09339 IclR helix-turn-helix domain BEN76_04830 PF01614 Bacterial transcriptional regulator BEN76_04835 PF01494 FAD binding domain BEN76_04840 PF07519 Tannase and feruloyl esterase BEN76_04855 PF03573 outer membrane porin, OprD family BEN76_04860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_04860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_04860 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_04865 PF00501 AMP-binding enzyme BEN76_04865 PF13193 AMP-binding enzyme C-terminal domain BEN76_04870 PF00171 Aldehyde dehydrogenase family BEN76_04875 PF00378 Enoyl-CoA hydratase/isomerase BEN76_04880 PF07690 Major Facilitator Superfamily BEN76_04890 PF17932 Tetracyclin repressor-like, C-terminal domain BEN76_04890 PF00440 Bacterial regulatory proteins, tetR family BEN76_04900 PF00106 short chain dehydrogenase BEN76_04905 PF00743 Flavin-binding monooxygenase-like BEN76_04915 PF02785 Biotin carboxylase C-terminal domain BEN76_04915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN76_04915 PF00289 Biotin carboxylase, N-terminal domain BEN76_04920 PF00364 Biotin-requiring enzyme BEN76_04925 PF01220 Dehydroquinase class II BEN76_04930 PF02649 Type I GTP cyclohydrolase folE2 BEN76_04935 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEN76_04935 PF07683 Cobalamin synthesis protein cobW C-terminal domain BEN76_04945 PF00480 ROK family BEN76_04955 PF00206 Lyase BEN76_04955 PF10415 Fumarase C C-terminus BEN76_04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_04960 PF03466 LysR substrate binding domain BEN76_04965 PF01425 Amidase BEN76_04970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEN76_04985 PF00355 Rieske [2Fe-2S] domain BEN76_04985 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BEN76_05000 PF00175 Oxidoreductase NAD-binding domain BEN76_05000 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN76_05005 PF01613 Flavin reductase like domain BEN76_05010 PF03573 outer membrane porin, OprD family BEN76_05025 PF12399 Branched-chain amino acid ATP-binding cassette transporter BEN76_05025 PF00005 ABC transporter BEN76_05030 PF00005 ABC transporter BEN76_05040 PF00596 Class II Aldolase and Adducin N-terminal domain BEN76_05055 PF02322 Cytochrome bd terminal oxidase subunit II BEN76_05060 PF01654 Cytochrome bd terminal oxidase subunit I BEN76_05075 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BEN76_05075 PF08666 SAF domain BEN76_05080 PF07690 Major Facilitator Superfamily BEN76_05085 PF13378 Enolase C-terminal domain-like BEN76_05090 PF00701 Dihydrodipicolinate synthetase family BEN76_05095 PF00171 Aldehyde dehydrogenase family BEN76_05100 PF07729 FCD domain BEN76_05100 PF00392 Bacterial regulatory proteins, gntR family BEN76_05105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN76_05105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN76_05115 PF00132 Bacterial transferase hexapeptide (six repeats) BEN76_05120 PF07715 TonB-dependent Receptor Plug Domain BEN76_05120 PF00593 TonB dependent receptor BEN76_05130 PF02653 Branched-chain amino acid transport system / permease component BEN76_05140 PF12399 Branched-chain amino acid ATP-binding cassette transporter BEN76_05140 PF00005 ABC transporter BEN76_05145 PF00005 ABC transporter BEN76_05170 PF00924 Mechanosensitive ion channel BEN76_05175 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BEN76_05185 PF00375 Sodium:dicarboxylate symporter family BEN76_05210 PF04717 Type VI secretion system, phage-baseplate injector BEN76_05230 PF00682 HMGL-like BEN76_05235 PF02785 Biotin carboxylase C-terminal domain BEN76_05235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BEN76_05235 PF00289 Biotin carboxylase, N-terminal domain BEN76_05235 PF00364 Biotin-requiring enzyme BEN76_05240 PF00378 Enoyl-CoA hydratase/isomerase BEN76_05245 PF01039 Carboxyl transferase domain BEN76_05250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_05250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_05250 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_05255 PF00440 Bacterial regulatory proteins, tetR family BEN76_05260 PF13193 AMP-binding enzyme C-terminal domain BEN76_05260 PF00501 AMP-binding enzyme BEN76_05275 PF07690 Major Facilitator Superfamily BEN76_05280 PF01757 Acyltransferase family BEN76_05285 PF01638 HxlR-like helix-turn-helix BEN76_05320 PF00171 Aldehyde dehydrogenase family BEN76_05325 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEN76_05325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEN76_05330 PF13193 AMP-binding enzyme C-terminal domain BEN76_05330 PF00501 AMP-binding enzyme BEN76_05335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_05335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_05335 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_05340 PF00378 Enoyl-CoA hydratase/isomerase BEN76_05350 PF07690 Major Facilitator Superfamily BEN76_05350 PF00083 Sugar (and other) transporter BEN76_05355 PF09905 DNA-binding protein VF530 BEN76_05425 PF01226 Formate/nitrite transporter BEN76_05430 PF00005 ABC transporter BEN76_05430 PF00664 ABC transporter transmembrane region BEN76_05440 PF12833 Helix-turn-helix domain BEN76_05440 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BEN76_05445 PF01597 Glycine cleavage H-protein BEN76_05450 PF00793 DAHP synthetase I family BEN76_05455 PF00005 ABC transporter BEN76_05455 PF12848 ABC transporter BEN76_05460 PF00107 Zinc-binding dehydrogenase BEN76_05460 PF08240 Alcohol dehydrogenase GroES-like domain BEN76_05465 PF02583 Metal-sensitive transcriptional repressor BEN76_05470 PF13091 PLD-like domain BEN76_05485 PF00106 short chain dehydrogenase BEN76_05500 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_05500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_05500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_05505 PF03466 LysR substrate binding domain BEN76_05520 PF10415 Fumarase C C-terminus BEN76_05520 PF00206 Lyase BEN76_05525 PF16363 GDP-mannose 4,6 dehydratase BEN76_05530 PF02635 DsrE/DsrF-like family BEN76_05550 PF00892 EamA-like transporter family BEN76_05555 PF00155 Aminotransferase class I and II BEN76_05555 PF00392 Bacterial regulatory proteins, gntR family BEN76_05560 PF00005 ABC transporter BEN76_05560 PF03459 TOBE domain BEN76_05565 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_05575 PF03453 MoeA N-terminal region (domain I and II) BEN76_05575 PF03454 MoeA C-terminal region (domain IV) BEN76_05575 PF00994 Probable molybdopterin binding domain BEN76_05580 PF01967 MoaC family BEN76_05585 PF02391 MoaE protein BEN76_05595 PF04055 Radical SAM superfamily BEN76_05595 PF06463 Molybdenum Cofactor Synthesis C BEN76_05600 PF12804 MobA-like NTP transferase domain BEN76_05605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEN76_05605 PF01568 Molydopterin dinucleotide binding domain BEN76_05605 PF00384 Molybdopterin oxidoreductase BEN76_05605 PF04324 BFD-like [2Fe-2S] binding domain BEN76_05610 PF18267 Rubredoxin NAD+ reductase C-terminal domain BEN76_05610 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_05610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEN76_05610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEN76_05610 PF04324 BFD-like [2Fe-2S] binding domain BEN76_05615 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_05615 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BEN76_05615 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BEN76_05615 PF04324 BFD-like [2Fe-2S] binding domain BEN76_05615 PF18267 Rubredoxin NAD+ reductase C-terminal domain BEN76_05620 PF07690 Major Facilitator Superfamily BEN76_05625 PF00072 Response regulator receiver domain BEN76_05625 PF00486 Transcriptional regulatory protein, C terminal BEN76_05630 PF00005 ABC transporter BEN76_05635 PF00384 Molybdopterin oxidoreductase BEN76_05640 PF02634 FdhD/NarQ family BEN76_05650 PF09992 Phosphodiester glycosidase BEN76_05660 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN76_05660 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BEN76_05665 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEN76_05670 PF00149 Calcineurin-like phosphoesterase BEN76_05675 PF00881 Nitroreductase family BEN76_05685 PF01116 Fructose-bisphosphate aldolase class-II BEN76_05700 PF00665 Integrase core domain BEN76_05700 PF13276 HTH-like domain BEN76_05700 PF13333 Integrase core domain BEN76_05705 PF00162 Phosphoglycerate kinase BEN76_05715 PF02545 Maf-like protein BEN76_05720 PF03600 Citrate transporter BEN76_05725 PF08007 Cupin superfamily protein BEN76_05730 PF01645 Conserved region in glutamate synthase BEN76_05745 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BEN76_05745 PF01565 FAD binding domain BEN76_05750 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEN76_05755 PF00465 Iron-containing alcohol dehydrogenase BEN76_05760 PF03061 Thioesterase superfamily BEN76_05765 PF12170 DNA polymerase III tau subunit V interacting with alpha BEN76_05765 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BEN76_05765 PF12169 DNA polymerase III subunits gamma and tau domain III BEN76_05770 PF07690 Major Facilitator Superfamily BEN76_05780 PF00144 Beta-lactamase BEN76_05795 PF02803 Thiolase, C-terminal domain BEN76_05795 PF00108 Thiolase, N-terminal domain BEN76_05805 PF03466 LysR substrate binding domain BEN76_05805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_05810 PF00923 Transaldolase/Fructose-6-phosphate aldolase BEN76_05815 PF01810 LysE type translocator BEN76_05820 PF03594 Benzoate membrane transport protein BEN76_05825 PF02308 MgtC family BEN76_05830 PF00689 Cation transporting ATPase, C-terminus BEN76_05830 PF00690 Cation transporter/ATPase, N-terminus BEN76_05845 PF06271 RDD family BEN76_05850 PF00557 Metallopeptidase family M24 BEN76_05855 PF05525 Branched-chain amino acid transport protein BEN76_05865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BEN76_05865 PF00381 PTS HPr component phosphorylation site BEN76_05865 PF02896 PEP-utilising enzyme, TIM barrel domain BEN76_05865 PF00391 PEP-utilising enzyme, mobile domain BEN76_05865 PF05524 PEP-utilising enzyme, N-terminal BEN76_05870 PF00294 pfkB family carbohydrate kinase BEN76_05875 PF02378 Phosphotransferase system, EIIC BEN76_05875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BEN76_05885 PF02542 YgbB family BEN76_05895 PF01266 FAD dependent oxidoreductase BEN76_05900 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BEN76_05905 PF04977 Septum formation initiator BEN76_05910 PF00113 Enolase, C-terminal TIM barrel domain BEN76_05910 PF03952 Enolase, N-terminal domain BEN76_05915 PF00793 DAHP synthetase I family BEN76_05920 PF00117 Glutamine amidotransferase class-I BEN76_05920 PF06418 CTP synthase N-terminus BEN76_05930 PF00582 Universal stress protein family BEN76_05945 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BEN76_05945 PF11940 Domain of unknown function (DUF3458) Ig-like fold BEN76_05945 PF01433 Peptidase family M1 domain BEN76_05960 PF02110 Hydroxyethylthiazole kinase family BEN76_05975 PF14493 Helix-turn-helix domain BEN76_05975 PF05970 PIF1-like helicase BEN76_05980 PF00465 Iron-containing alcohol dehydrogenase BEN76_05995 PF00171 Aldehyde dehydrogenase family BEN76_06000 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BEN76_06000 PF00117 Glutamine amidotransferase class-I BEN76_06040 PF01264 Chorismate synthase BEN76_06045 PF05175 Methyltransferase small domain BEN76_06055 PF04264 YceI-like domain BEN76_06060 PF00456 Transketolase, thiamine diphosphate binding domain BEN76_06060 PF02780 Transketolase, C-terminal domain BEN76_06060 PF02779 Transketolase, pyrimidine binding domain BEN76_06065 PF00438 S-adenosylmethionine synthetase, N-terminal domain BEN76_06065 PF02773 S-adenosylmethionine synthetase, C-terminal domain BEN76_06065 PF02772 S-adenosylmethionine synthetase, central domain BEN76_06085 PF02075 Crossover junction endodeoxyribonuclease RuvC BEN76_06090 PF01256 Carbohydrate kinase BEN76_06090 PF03853 YjeF-related protein N-terminus BEN76_06095 PF08331 Domain of unknown function (DUF1730) BEN76_06100 PF06968 Biotin and Thiamin Synthesis associated domain BEN76_06100 PF04055 Radical SAM superfamily BEN76_06215 PF00107 Zinc-binding dehydrogenase BEN76_06215 PF08240 Alcohol dehydrogenase GroES-like domain BEN76_06220 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_06220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN76_06225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN76_06225 PF00364 Biotin-requiring enzyme BEN76_06225 PF02817 e3 binding domain BEN76_06230 PF02779 Transketolase, pyrimidine binding domain BEN76_06230 PF02780 Transketolase, C-terminal domain BEN76_06235 PF00676 Dehydrogenase E1 component BEN76_06240 PF04055 Radical SAM superfamily BEN76_06250 PF06628 Catalase-related immune-responsive BEN76_06250 PF18011 C-terminal domain found in long catalases BEN76_06250 PF00199 Catalase BEN76_06255 PF01022 Bacterial regulatory protein, arsR family BEN76_06265 PF01758 Sodium Bile acid symporter family BEN76_06270 PF03358 NADPH-dependent FMN reductase BEN76_06275 PF03616 Sodium/glutamate symporter BEN76_06280 PF00486 Transcriptional regulatory protein, C terminal BEN76_06280 PF00072 Response regulator receiver domain BEN76_06285 PF16736 Single Cache-like BEN76_06285 PF00989 PAS fold BEN76_06285 PF00512 His Kinase A (phospho-acceptor) domain BEN76_06285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_06295 PF00873 AcrB/AcrD/AcrF family BEN76_06300 PF00529 HlyD membrane-fusion protein of T1SS BEN76_06300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN76_06320 PF00107 Zinc-binding dehydrogenase BEN76_06320 PF16884 N-terminal domain of oxidoreductase BEN76_06330 PF00106 short chain dehydrogenase BEN76_06365 PF08281 Sigma-70, region 4 BEN76_06365 PF04542 Sigma-70 region 2 BEN76_06375 PF05114 Protein of unknown function (DUF692) BEN76_06395 PF07715 TonB-dependent Receptor Plug Domain BEN76_06395 PF00593 TonB dependent receptor BEN76_06405 PF01709 Transcriptional regulator BEN76_06420 PF00005 ABC transporter BEN76_06425 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_06430 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_06445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_06445 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEN76_06455 PF00296 Luciferase-like monooxygenase BEN76_06460 PF03180 NLPA lipoprotein BEN76_06465 PF09383 NIL domain BEN76_06465 PF00005 ABC transporter BEN76_06470 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_06475 PF06071 Protein of unknown function (DUF933) BEN76_06475 PF01926 50S ribosome-binding GTPase BEN76_06480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEN76_06480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEN76_06485 PF03466 LysR substrate binding domain BEN76_06485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_06495 PF00465 Iron-containing alcohol dehydrogenase BEN76_06520 PF02222 ATP-grasp domain BEN76_06525 PF01966 HD domain BEN76_06525 PF08335 GlnD PII-uridylyltransferase BEN76_06525 PF01909 Nucleotidyltransferase domain BEN76_06530 PF00155 Aminotransferase class I and II BEN76_06535 PF07715 TonB-dependent Receptor Plug Domain BEN76_06535 PF00593 TonB dependent receptor BEN76_06545 PF02311 AraC-like ligand binding domain BEN76_06545 PF12833 Helix-turn-helix domain BEN76_06550 PF00255 Glutathione peroxidase BEN76_06555 PF01641 SelR domain BEN76_06560 PF00155 Aminotransferase class I and II BEN76_06565 PF17763 Glutaminase/Asparaginase C-terminal domain BEN76_06565 PF00710 Asparaginase, N-terminal BEN76_06570 PF01336 OB-fold nucleic acid binding domain BEN76_06570 PF02811 PHP domain BEN76_06570 PF14579 Helix-hairpin-helix motif BEN76_06570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BEN76_06570 PF07733 Bacterial DNA polymerase III alpha NTPase domain BEN76_06575 PF00588 SpoU rRNA Methylase family BEN76_06580 PF00132 Bacterial transferase hexapeptide (six repeats) BEN76_06600 PF05230 MASE2 domain BEN76_06600 PF00990 Diguanylate cyclase, GGDEF domain BEN76_06605 PF02677 Epoxyqueuosine reductase QueH BEN76_06610 PF12697 Alpha/beta hydrolase family BEN76_06615 PF01979 Amidohydrolase family BEN76_06620 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_06625 PF00005 ABC transporter BEN76_06630 PF09084 NMT1/THI5 like BEN76_06635 PF00392 Bacterial regulatory proteins, gntR family BEN76_06635 PF07729 FCD domain BEN76_06640 PF00593 TonB dependent receptor BEN76_06640 PF07715 TonB-dependent Receptor Plug Domain BEN76_06650 PF13520 Amino acid permease BEN76_06665 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BEN76_06665 PF12833 Helix-turn-helix domain BEN76_06670 PF00107 Zinc-binding dehydrogenase BEN76_06670 PF08240 Alcohol dehydrogenase GroES-like domain BEN76_06675 PF01638 HxlR-like helix-turn-helix BEN76_06680 PF00202 Aminotransferase class-III BEN76_06710 PF12146 Serine aminopeptidase, S33 BEN76_06715 PF02803 Thiolase, C-terminal domain BEN76_06715 PF00108 Thiolase, N-terminal domain BEN76_06720 PF01144 Coenzyme A transferase BEN76_06725 PF01144 Coenzyme A transferase BEN76_06730 PF02426 Muconolactone delta-isomerase BEN76_06735 PF13378 Enolase C-terminal domain-like BEN76_06735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BEN76_06740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_06740 PF03466 LysR substrate binding domain BEN76_06745 PF01926 50S ribosome-binding GTPase BEN76_06750 PF01926 50S ribosome-binding GTPase BEN76_06755 PF04444 Catechol dioxygenase N terminus BEN76_06755 PF00775 Dioxygenase BEN76_06760 PF03594 Benzoate membrane transport protein BEN76_06765 PF00106 short chain dehydrogenase BEN76_06770 PF00175 Oxidoreductase NAD-binding domain BEN76_06770 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN76_06770 PF00970 Oxidoreductase FAD-binding domain BEN76_06775 PF00866 Ring hydroxylating beta subunit BEN76_06780 PF00355 Rieske [2Fe-2S] domain BEN76_06780 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BEN76_06785 PF03466 LysR substrate binding domain BEN76_06785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_06790 PF07690 Major Facilitator Superfamily BEN76_06795 PF03573 outer membrane porin, OprD family BEN76_06800 PF01590 GAF domain BEN76_06800 PF00158 Sigma-54 interaction domain BEN76_06800 PF02954 Bacterial regulatory protein, Fis family BEN76_06805 PF00171 Aldehyde dehydrogenase family BEN76_06810 PF08240 Alcohol dehydrogenase GroES-like domain BEN76_06810 PF00107 Zinc-binding dehydrogenase BEN76_06815 PF07859 alpha/beta hydrolase fold BEN76_06830 PF03466 LysR substrate binding domain BEN76_06830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_06835 PF01494 FAD binding domain BEN76_06840 PF00884 Sulfatase BEN76_06840 PF08019 Phosphoethanolamine transferase EptA/EptB BEN76_06845 PF00072 Response regulator receiver domain BEN76_06845 PF00486 Transcriptional regulatory protein, C terminal BEN76_06850 PF00512 His Kinase A (phospho-acceptor) domain BEN76_06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_06860 PF01979 Amidohydrolase family BEN76_06865 PF02574 Homocysteine S-methyltransferase BEN76_06870 PF13520 Amino acid permease BEN76_06880 PF03109 ABC1 family BEN76_06885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_06885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_06885 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_06890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_06890 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_06890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_06895 PF00487 Fatty acid desaturase BEN76_06900 PF12833 Helix-turn-helix domain BEN76_06900 PF12852 Cupin BEN76_06910 PF00216 Bacterial DNA-binding protein BEN76_06925 PF02082 Transcriptional regulator BEN76_06930 PF00266 Aminotransferase class-V BEN76_06935 PF01592 NifU-like N terminal domain BEN76_06940 PF01521 Iron-sulphur cluster biosynthesis BEN76_06945 PF07743 HSCB C-terminal oligomerisation domain BEN76_06945 PF00226 DnaJ domain BEN76_06950 PF00012 Hsp70 protein BEN76_06955 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN76_06960 PF00211 Adenylate and Guanylate cyclase catalytic domain BEN76_06970 PF00270 DEAD/DEAH box helicase BEN76_06970 PF00271 Helicase conserved C-terminal domain BEN76_06970 PF03461 TRCF domain BEN76_06970 PF17757 UvrB interaction domain BEN76_06970 PF02559 CarD-like/TRCF domain BEN76_06985 PF03737 Aldolase/RraA BEN76_06990 PF13460 NAD(P)H-binding BEN76_06995 PF01649 Ribosomal protein S20 BEN76_07005 PF00459 Inositol monophosphatase family BEN76_07010 PF01479 S4 domain BEN76_07015 PF00154 recA bacterial DNA recombination protein BEN76_07020 PF02631 RecX family BEN76_07035 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BEN76_07035 PF00132 Bacterial transferase hexapeptide (six repeats) BEN76_07040 PF07977 FabA-like domain BEN76_07045 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BEN76_07045 PF00132 Bacterial transferase hexapeptide (six repeats) BEN76_07055 PF07244 Surface antigen variable number repeat BEN76_07055 PF01103 Surface antigen BEN76_07060 PF02163 Peptidase family M50 BEN76_07060 PF17820 PDZ domain BEN76_07060 PF13180 PDZ domain BEN76_07065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BEN76_07065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BEN76_07065 PF13288 DXP reductoisomerase C-terminal domain BEN76_07075 PF01255 Putative undecaprenyl diphosphate synthase BEN76_07080 PF01765 Ribosome recycling factor BEN76_07085 PF00696 Amino acid kinase family BEN76_07090 PF18693 TRAM domain BEN76_07090 PF04055 Radical SAM superfamily BEN76_07090 PF00919 Uncharacterized protein family UPF0004 BEN76_07095 PF00512 His Kinase A (phospho-acceptor) domain BEN76_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_07095 PF00989 PAS fold BEN76_07100 PF00158 Sigma-54 interaction domain BEN76_07100 PF00072 Response regulator receiver domain BEN76_07100 PF02954 Bacterial regulatory protein, Fis family BEN76_07105 PF00440 Bacterial regulatory proteins, tetR family BEN76_07110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEN76_07110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEN76_07115 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BEN76_07120 PF10431 C-terminal, D2-small domain, of ClpB protein BEN76_07120 PF02861 Clp amino terminal domain, pathogenicity island component BEN76_07120 PF17871 AAA lid domain BEN76_07120 PF07724 AAA domain (Cdc48 subfamily) BEN76_07120 PF00004 ATPase family associated with various cellular activities (AAA) BEN76_07125 PF02617 ATP-dependent Clp protease adaptor protein ClpS BEN76_07135 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEN76_07135 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEN76_07145 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BEN76_07150 PF00585 C-terminal regulatory domain of Threonine dehydratase BEN76_07150 PF00291 Pyridoxal-phosphate dependent enzyme BEN76_07155 PF02080 TrkA-C domain BEN76_07155 PF02254 TrkA-N domain BEN76_07160 PF02386 Cation transport protein BEN76_07165 PF02253 Phospholipase A1 BEN76_07170 PF00675 Insulinase (Peptidase family M16) BEN76_07170 PF05193 Peptidase M16 inactive domain BEN76_07170 PF08367 Peptidase M16C associated BEN76_07175 PF00294 pfkB family carbohydrate kinase BEN76_07185 PF07290 Protein of unknown function (DUF1449) BEN76_07190 PF13180 PDZ domain BEN76_07195 PF01784 NIF3 (NGG1p interacting factor 3) BEN76_07200 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEN76_07200 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEN76_07220 PF01037 Lrp/AsnC ligand binding domain BEN76_07225 PF00324 Amino acid permease BEN76_07245 PF00375 Sodium:dicarboxylate symporter family BEN76_07265 PF00069 Protein kinase domain BEN76_07285 PF00814 Glycoprotease family BEN76_07290 PF01165 Ribosomal protein S21 BEN76_07305 PF01435 Peptidase family M48 BEN76_07310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN76_07310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN76_07325 PF00156 Phosphoribosyl transferase domain BEN76_07335 PF01180 Dihydroorotate dehydrogenase BEN76_07355 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BEN76_07355 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BEN76_07360 PF00881 Nitroreductase family BEN76_07370 PF00271 Helicase conserved C-terminal domain BEN76_07370 PF00270 DEAD/DEAH box helicase BEN76_07375 PF00313 'Cold-shock' DNA-binding domain BEN76_07385 PF04542 Sigma-70 region 2 BEN76_07385 PF00140 Sigma-70 factor, region 1.2 BEN76_07385 PF04545 Sigma-70, region 4 BEN76_07390 PF04241 Protein of unknown function (DUF423) BEN76_07400 PF05690 Thiazole biosynthesis protein ThiG BEN76_07410 PF02798 Glutathione S-transferase, N-terminal domain BEN76_07410 PF00043 Glutathione S-transferase, C-terminal domain BEN76_07415 PF02390 Putative methyltransferase BEN76_07425 PF01979 Amidohydrolase family BEN76_07430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BEN76_07430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BEN76_07435 PF01170 Putative RNA methylase family UPF0020 BEN76_07435 PF02926 THUMP domain BEN76_07435 PF10672 S-adenosylmethionine-dependent methyltransferase BEN76_07445 PF00920 Dehydratase family BEN76_07450 PF10431 C-terminal, D2-small domain, of ClpB protein BEN76_07450 PF02861 Clp amino terminal domain, pathogenicity island component BEN76_07450 PF17871 AAA lid domain BEN76_07450 PF07724 AAA domain (Cdc48 subfamily) BEN76_07450 PF00004 ATPase family associated with various cellular activities (AAA) BEN76_07460 PF00324 Amino acid permease BEN76_07465 PF00266 Aminotransferase class-V BEN76_07475 PF02566 OsmC-like protein BEN76_07480 PF00027 Cyclic nucleotide-binding domain BEN76_07480 PF13545 Crp-like helix-turn-helix domain BEN76_07485 PF00248 Aldo/keto reductase family BEN76_07490 PF01435 Peptidase family M48 BEN76_07500 PF00709 Adenylosuccinate synthetase BEN76_07505 PF13393 Histidyl-tRNA synthetase BEN76_07510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BEN76_07510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEN76_07515 PF02272 DHHA1 domain BEN76_07515 PF01411 tRNA synthetases class II (A) BEN76_07515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEN76_07520 PF13840 ACT domain BEN76_07520 PF01842 ACT domain BEN76_07520 PF00696 Amino acid kinase family BEN76_07525 PF02599 Global regulator protein family BEN76_07530 PF01351 Ribonuclease HII BEN76_07540 PF01292 Prokaryotic cytochrome b561 BEN76_07545 PF00962 Adenosine/AMP deaminase BEN76_07550 PF00860 Permease family BEN76_07565 PF00916 Sulfate permease family BEN76_07565 PF01740 STAS domain BEN76_07570 PF07715 TonB-dependent Receptor Plug Domain BEN76_07570 PF00593 TonB dependent receptor BEN76_07580 PF00582 Universal stress protein family BEN76_07595 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_07595 PF13192 Thioredoxin domain BEN76_07605 PF00462 Glutaredoxin BEN76_07610 PF00202 Aminotransferase class-III BEN76_07615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_07615 PF03466 LysR substrate binding domain BEN76_07620 PF01551 Peptidase family M23 BEN76_07620 PF01476 LysM domain BEN76_07625 PF01975 Survival protein SurE BEN76_07635 PF00768 D-alanyl-D-alanine carboxypeptidase BEN76_07635 PF07943 Penicillin-binding protein 5, C-terminal domain BEN76_07640 PF00132 Bacterial transferase hexapeptide (six repeats) BEN76_07645 PF01381 Helix-turn-helix BEN76_07655 PF00293 NUDIX domain BEN76_07665 PF04356 Protein of unknown function (DUF489) BEN76_07670 PF08328 Adenylosuccinate lyase C-terminal BEN76_07670 PF00206 Lyase BEN76_07675 PF01343 Peptidase family S49 BEN76_07675 PF08496 Peptidase family S49 N-terminal BEN76_07680 PF00005 ABC transporter BEN76_07685 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_07690 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_07695 PF12849 PBP superfamily domain BEN76_07700 PF00132 Bacterial transferase hexapeptide (six repeats) BEN76_07705 PF07848 PaaX-like protein BEN76_07705 PF08223 PaaX-like protein C-terminal domain BEN76_07710 PF14535 AMP-binding enzyme C-terminal domain BEN76_07710 PF00501 AMP-binding enzyme BEN76_07715 PF00378 Enoyl-CoA hydratase/isomerase BEN76_07720 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN76_07720 PF00175 Oxidoreductase NAD-binding domain BEN76_07720 PF00970 Oxidoreductase FAD-binding domain BEN76_07725 PF01883 Iron-sulfur cluster assembly protein BEN76_07730 PF05138 Phenylacetic acid catabolic protein BEN76_07735 PF06243 Phenylacetic acid degradation B BEN76_07740 PF05138 Phenylacetic acid catabolic protein BEN76_07745 PF01575 MaoC like domain BEN76_07745 PF00171 Aldehyde dehydrogenase family BEN76_07750 PF00324 Amino acid permease BEN76_07755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEN76_07755 PF00205 Thiamine pyrophosphate enzyme, central domain BEN76_07755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEN76_07760 PF01037 Lrp/AsnC ligand binding domain BEN76_07765 PF00282 Pyridoxal-dependent decarboxylase conserved domain BEN76_07770 PF00202 Aminotransferase class-III BEN76_07780 PF00487 Fatty acid desaturase BEN76_07785 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN76_07785 PF00970 Oxidoreductase FAD-binding domain BEN76_07785 PF00175 Oxidoreductase NAD-binding domain BEN76_07790 PF00440 Bacterial regulatory proteins, tetR family BEN76_07795 PF00210 Ferritin-like domain BEN76_07800 PF12137 RNA polymerase recycling family C-terminal BEN76_07800 PF18337 RapA N-terminal Tudor like domain BEN76_07800 PF00176 SNF2 family N-terminal domain BEN76_07800 PF00271 Helicase conserved C-terminal domain BEN76_07800 PF18339 RapA N-terminal Tudor like domain 1 BEN76_07805 PF00849 RNA pseudouridylate synthase BEN76_07815 PF00202 Aminotransferase class-III BEN76_07820 PF02581 Thiamine monophosphate synthase BEN76_07835 PF01928 CYTH domain BEN76_07850 PF05193 Peptidase M16 inactive domain BEN76_07850 PF00675 Insulinase (Peptidase family M16) BEN76_07855 PF00654 Voltage gated chloride channel BEN76_07860 PF02567 Phenazine biosynthesis-like protein BEN76_07870 PF00849 RNA pseudouridylate synthase BEN76_07875 PF00576 HIUase/Transthyretin family BEN76_07880 PF13276 HTH-like domain BEN76_07880 PF00665 Integrase core domain BEN76_07880 PF13333 Integrase core domain BEN76_07890 PF03971 Monomeric isocitrate dehydrogenase BEN76_07900 PF07943 Penicillin-binding protein 5, C-terminal domain BEN76_07900 PF00768 D-alanyl-D-alanine carboxypeptidase BEN76_07905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN76_07910 PF03441 FAD binding domain of DNA photolyase BEN76_07910 PF00875 DNA photolyase BEN76_07930 PF00491 Arginase family BEN76_07935 PF01979 Amidohydrolase family BEN76_07940 PF00324 Amino acid permease BEN76_07945 PF00221 Aromatic amino acid lyase BEN76_07950 PF17392 Urocanase C-terminal domain BEN76_07950 PF01175 Urocanase Rossmann-like domain BEN76_07950 PF17391 Urocanase N-terminal domain BEN76_07955 PF05962 HutD BEN76_07960 PF00392 Bacterial regulatory proteins, gntR family BEN76_07960 PF07702 UTRA domain BEN76_07965 PF07690 Major Facilitator Superfamily BEN76_07970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_07970 PF03466 LysR substrate binding domain BEN76_07975 PF00082 Subtilase family BEN76_07985 PF00155 Aminotransferase class I and II BEN76_07985 PF00392 Bacterial regulatory proteins, gntR family BEN76_07990 PF07690 Major Facilitator Superfamily BEN76_07995 PF00313 'Cold-shock' DNA-binding domain BEN76_08010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN76_08010 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_08015 PF00892 EamA-like transporter family BEN76_08020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_08020 PF03466 LysR substrate binding domain BEN76_08025 PF00764 Arginosuccinate synthase BEN76_08030 PF01979 Amidohydrolase family BEN76_08035 PF00929 Exonuclease BEN76_08050 PF00324 Amino acid permease BEN76_08075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN76_08075 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_08080 PF00005 ABC transporter BEN76_08080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BEN76_08085 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_08085 PF12911 N-terminal TM domain of oligopeptide transport permease C BEN76_08090 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_08095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BEN76_08100 PF01464 Transglycosylase SLT domain BEN76_08100 PF01476 LysM domain BEN76_08100 PF01464 Transglycosylase SLT domain BEN76_08100 PF01476 LysM domain BEN76_08105 PF00929 Exonuclease BEN76_08115 PF09297 NADH pyrophosphatase zinc ribbon domain BEN76_08115 PF00293 NUDIX domain BEN76_08125 PF04972 BON domain BEN76_08130 PF02021 Uncharacterised protein family UPF0102 BEN76_08135 PF04348 LppC putative lipoprotein BEN76_08140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BEN76_08150 PF01494 FAD binding domain BEN76_08155 PF01494 FAD binding domain BEN76_08160 PF00557 Metallopeptidase family M24 BEN76_08160 PF05195 Aminopeptidase P, N-terminal domain BEN76_08175 PF05164 Cell division protein ZapA BEN76_08190 PF00535 Glycosyl transferase family 2 BEN76_08200 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BEN76_08205 PF01812 5-formyltetrahydrofolate cyclo-ligase family BEN76_08210 PF00004 ATPase family associated with various cellular activities (AAA) BEN76_08210 PF05362 Lon protease (S16) C-terminal proteolytic domain BEN76_08210 PF02190 ATP-dependent protease La (LON) substrate-binding domain BEN76_08215 PF02590 Predicted SPOUT methyltransferase BEN76_08220 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BEN76_08230 PF04060 Putative Fe-S cluster BEN76_08235 PF10576 Iron-sulfur binding domain of endonuclease III BEN76_08235 PF00633 Helix-hairpin-helix motif BEN76_08235 PF00730 HhH-GPD superfamily base excision DNA repair protein BEN76_08240 PF05191 Adenylate kinase, active site lid BEN76_08255 PF03717 Penicillin-binding Protein dimerisation domain BEN76_08255 PF00905 Penicillin binding protein transpeptidase domain BEN76_08280 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEN76_08285 PF01730 UreF BEN76_08285 PF02814 UreE urease accessory protein, N-terminal domain BEN76_08285 PF05194 UreE urease accessory protein, C-terminal domain BEN76_08290 PF05194 UreE urease accessory protein, C-terminal domain BEN76_08290 PF02814 UreE urease accessory protein, N-terminal domain BEN76_08295 PF00449 Urease alpha-subunit, N-terminal domain BEN76_08295 PF01979 Amidohydrolase family BEN76_08300 PF00699 Urease beta subunit BEN76_08305 PF00547 Urease, gamma subunit BEN76_08310 PF01774 UreD urease accessory protein BEN76_08325 PF00463 Isocitrate lyase family BEN76_08330 PF03466 LysR substrate binding domain BEN76_08330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_08335 PF00571 CBS domain BEN76_08335 PF01595 Cyclin M transmembrane N-terminal domain BEN76_08335 PF03471 Transporter associated domain BEN76_08345 PF03600 Citrate transporter BEN76_08350 PF00009 Elongation factor Tu GTP binding domain BEN76_08355 PF01507 Phosphoadenosine phosphosulfate reductase family BEN76_08360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BEN76_08360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BEN76_08365 PF01336 OB-fold nucleic acid binding domain BEN76_08365 PF00152 tRNA synthetases class II (D, K and N) BEN76_08375 PF00301 Rubredoxin BEN76_08380 PF18113 Rubredoxin binding C-terminal domain BEN76_08380 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_08385 PF00561 alpha/beta hydrolase fold BEN76_08390 PF03466 LysR substrate binding domain BEN76_08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_08395 PF17941 Polyphosphate kinase C-terminal domain 1 BEN76_08395 PF13089 Polyphosphate kinase N-terminal domain BEN76_08395 PF13090 Polyphosphate kinase C-terminal domain 2 BEN76_08395 PF02503 Polyphosphate kinase middle domain BEN76_08400 PF00912 Transglycosylase BEN76_08405 PF01694 Rhomboid family BEN76_08415 PF00005 ABC transporter BEN76_08420 PF13472 GDSL-like Lipase/Acylhydrolase family BEN76_08425 PF00484 Carbonic anhydrase BEN76_08435 PF00593 TonB dependent receptor BEN76_08435 PF07715 TonB-dependent Receptor Plug Domain BEN76_08440 PF01106 NifU-like domain BEN76_08440 PF01521 Iron-sulphur cluster biosynthesis BEN76_08455 PF00291 Pyridoxal-phosphate dependent enzyme BEN76_08460 PF01384 Phosphate transporter family BEN76_08465 PF02574 Homocysteine S-methyltransferase BEN76_08465 PF00809 Pterin binding enzyme BEN76_08465 PF02965 Vitamin B12 dependent methionine synthase, activation domain BEN76_08465 PF02607 B12 binding domain BEN76_08465 PF02310 B12 binding domain BEN76_08475 PF07715 TonB-dependent Receptor Plug Domain BEN76_08475 PF00593 TonB dependent receptor BEN76_08480 PF01263 Aldose 1-epimerase BEN76_08485 PF07690 Major Facilitator Superfamily BEN76_08495 PF01327 Polypeptide deformylase BEN76_08510 PF04973 Nicotinamide mononucleotide transporter BEN76_08525 PF00535 Glycosyl transferase family 2 BEN76_08530 PF01522 Polysaccharide deacetylase BEN76_08530 PF14883 Hypothetical glycosyl hydrolase family 13 BEN76_08535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN76_08540 PF07152 YaeQ protein BEN76_08545 PF00375 Sodium:dicarboxylate symporter family BEN76_08550 PF07683 Cobalamin synthesis protein cobW C-terminal domain BEN76_08550 PF02492 CobW/HypB/UreG, nucleotide-binding domain BEN76_08560 PF03061 Thioesterase superfamily BEN76_08575 PF02028 BCCT, betaine/carnitine/choline family transporter BEN76_08580 PF02028 BCCT, betaine/carnitine/choline family transporter BEN76_08585 PF00440 Bacterial regulatory proteins, tetR family BEN76_08585 PF13977 BetI-type transcriptional repressor, C-terminal BEN76_08590 PF00171 Aldehyde dehydrogenase family BEN76_08595 PF00732 GMC oxidoreductase BEN76_08595 PF05199 GMC oxidoreductase BEN76_08600 PF06039 Malate:quinone oxidoreductase (Mqo) BEN76_08620 PF00593 TonB dependent receptor BEN76_08620 PF07715 TonB-dependent Receptor Plug Domain BEN76_08640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEN76_08640 PF00205 Thiamine pyrophosphate enzyme, central domain BEN76_08640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEN76_08645 PF00171 Aldehyde dehydrogenase family BEN76_08650 PF01958 Domain of unknown function DUF108 BEN76_08650 PF03447 Homoserine dehydrogenase, NAD binding domain BEN76_08660 PF12146 Serine aminopeptidase, S33 BEN76_08670 PF07690 Major Facilitator Superfamily BEN76_08675 PF14759 Reductase C-terminal BEN76_08675 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_08690 PF00355 Rieske [2Fe-2S] domain BEN76_08700 PF00355 Rieske [2Fe-2S] domain BEN76_08705 PF01614 Bacterial transcriptional regulator BEN76_08705 PF09339 IclR helix-turn-helix domain BEN76_08710 PF01494 FAD binding domain BEN76_08715 PF07690 Major Facilitator Superfamily BEN76_08720 PF00355 Rieske [2Fe-2S] domain BEN76_08725 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN76_08725 PF00175 Oxidoreductase NAD-binding domain BEN76_08740 PF00593 TonB dependent receptor BEN76_08740 PF07715 TonB-dependent Receptor Plug Domain BEN76_08750 PF01032 FecCD transport family BEN76_08755 PF00005 ABC transporter BEN76_08760 PF00392 Bacterial regulatory proteins, gntR family BEN76_08760 PF07729 FCD domain BEN76_08765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_08765 PF03466 LysR substrate binding domain BEN76_08785 PF00171 Aldehyde dehydrogenase family BEN76_08790 PF00083 Sugar (and other) transporter BEN76_08795 PF00296 Luciferase-like monooxygenase BEN76_08800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_08800 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_08800 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEN76_08805 PF00593 TonB dependent receptor BEN76_08805 PF07715 TonB-dependent Receptor Plug Domain BEN76_08810 PF01554 MatE BEN76_08825 PF00593 TonB dependent receptor BEN76_08825 PF07715 TonB-dependent Receptor Plug Domain BEN76_08845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BEN76_08845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BEN76_08850 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BEN76_08855 PF13193 AMP-binding enzyme C-terminal domain BEN76_08855 PF00501 AMP-binding enzyme BEN76_08860 PF00975 Thioesterase domain BEN76_08860 PF00668 Condensation domain BEN76_08860 PF00550 Phosphopantetheine attachment site BEN76_08860 PF00501 AMP-binding enzyme BEN76_08860 PF13193 AMP-binding enzyme C-terminal domain BEN76_08865 PF13193 AMP-binding enzyme C-terminal domain BEN76_08865 PF00501 AMP-binding enzyme BEN76_08865 PF00550 Phosphopantetheine attachment site BEN76_08865 PF00668 Condensation domain BEN76_08870 PF00550 Phosphopantetheine attachment site BEN76_08870 PF00501 AMP-binding enzyme BEN76_08870 PF00668 Condensation domain BEN76_08870 PF13193 AMP-binding enzyme C-terminal domain BEN76_08870 PF00550 Phosphopantetheine attachment site BEN76_08870 PF00668 Condensation domain BEN76_08870 PF00501 AMP-binding enzyme BEN76_08870 PF13193 AMP-binding enzyme C-terminal domain BEN76_08875 PF00106 short chain dehydrogenase BEN76_08880 PF00857 Isochorismatase family BEN76_08880 PF00550 Phosphopantetheine attachment site BEN76_08885 PF00425 chorismate binding enzyme BEN76_08895 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain BEN76_08895 PF13018 Extended Signal Peptide of Type V secretion system BEN76_08895 PF05594 Haemagluttinin repeat BEN76_08895 PF05860 haemagglutination activity domain BEN76_08895 PF13332 Hemagglutinin repeat BEN76_08930 PF04829 Pre-toxin domain with VENN motif BEN76_08930 PF13332 Hemagglutinin repeat BEN76_08930 PF05860 haemagglutination activity domain BEN76_08930 PF13018 Extended Signal Peptide of Type V secretion system BEN76_08935 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BEN76_08935 PF17287 POTRA domain BEN76_08935 PF08479 POTRA domain, ShlB-type BEN76_08945 PF00083 Sugar (and other) transporter BEN76_08960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_08960 PF03466 LysR substrate binding domain BEN76_08965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEN76_08965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEN76_08975 PF01546 Peptidase family M20/M25/M40 BEN76_08975 PF07687 Peptidase dimerisation domain BEN76_08990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BEN76_08990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BEN76_09000 PF07690 Major Facilitator Superfamily BEN76_09005 PF00529 HlyD membrane-fusion protein of T1SS BEN76_09005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN76_09010 PF03061 Thioesterase superfamily BEN76_09015 PF00490 Delta-aminolevulinic acid dehydratase BEN76_09020 PF01266 FAD dependent oxidoreductase BEN76_09025 PF08338 Domain of unknown function (DUF1731) BEN76_09025 PF01370 NAD dependent epimerase/dehydratase family BEN76_09040 PF00149 Calcineurin-like phosphoesterase BEN76_09040 PF12320 Type 5 capsule protein repressor C-terminal domain BEN76_09055 PF02673 Bacitracin resistance protein BacA BEN76_09060 PF01168 Alanine racemase, N-terminal domain BEN76_09065 PF00437 Type II/IV secretion system protein BEN76_09070 PF00437 Type II/IV secretion system protein BEN76_09075 PF01475 Ferric uptake regulator family BEN76_09080 PF04355 SmpA / OmlA family BEN76_09085 PF03658 RnfH family Ubiquitin BEN76_09095 PF13230 Glutamine amidotransferases class-II BEN76_09105 PF00696 Amino acid kinase family BEN76_09110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN76_09110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN76_09110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN76_09110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN76_09115 PF00692 dUTPase BEN76_09120 PF00580 UvrD/REP helicase N-terminal domain BEN76_09120 PF13361 UvrD-like helicase C-terminal domain BEN76_09125 PF00691 OmpA family BEN76_09125 PF13488 Glycine zipper BEN76_09130 PF01553 Acyltransferase BEN76_09140 PF03775 Septum formation inhibitor MinC, C-terminal domain BEN76_09145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BEN76_09150 PF03776 Septum formation topological specificity factor MinE BEN76_09165 PF01580 FtsK/SpoIIIE family BEN76_09165 PF17854 FtsK alpha domain BEN76_09165 PF09397 Ftsk gamma domain BEN76_09165 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BEN76_09170 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_09175 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BEN76_09180 PF04376 Arginine-tRNA-protein transferase, N terminus BEN76_09180 PF04377 Arginine-tRNA-protein transferase, C terminus BEN76_09185 PF00583 Acetyltransferase (GNAT) family BEN76_09195 PF00009 Elongation factor Tu GTP binding domain BEN76_09195 PF03143 Elongation factor Tu C-terminal domain BEN76_09195 PF03144 Elongation factor Tu domain 2 BEN76_09200 PF00679 Elongation factor G C-terminus BEN76_09200 PF03764 Elongation factor G, domain IV BEN76_09200 PF00009 Elongation factor Tu GTP binding domain BEN76_09200 PF03144 Elongation factor Tu domain 2 BEN76_09200 PF14492 Elongation Factor G, domain II BEN76_09205 PF00177 Ribosomal protein S7p/S5e BEN76_09210 PF00164 Ribosomal protein S12/S23 BEN76_09220 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN76_09220 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN76_09230 PF01757 Acyltransferase family BEN76_09235 PF13419 Haloacid dehalogenase-like hydrolase BEN76_09240 PF08543 Phosphomethylpyrimidine kinase BEN76_09240 PF02581 Thiamine monophosphate synthase BEN76_09240 PF03070 TENA/THI-4/PQQC family BEN76_09245 PF01476 LysM domain BEN76_09245 PF04972 BON domain BEN76_09250 PF00550 Phosphopantetheine attachment site BEN76_09260 PF00698 Acyl transferase domain BEN76_09265 PF01783 Ribosomal L32p protein family BEN76_09270 PF02620 Large ribosomal RNA subunit accumulation protein YceD BEN76_09275 PF04315 Elongation factor P hydroxylase BEN76_09280 PF01300 Telomere recombination BEN76_09290 PF02616 Segregation and condensation protein ScpA BEN76_09295 PF04079 Segregation and condensation complex subunit ScpB BEN76_09300 PF01479 S4 domain BEN76_09300 PF00849 RNA pseudouridylate synthase BEN76_09315 PF00155 Aminotransferase class I and II BEN76_09320 PF00202 Aminotransferase class-III BEN76_09320 PF06968 Biotin and Thiamin Synthesis associated domain BEN76_09320 PF04055 Radical SAM superfamily BEN76_09330 PF00578 AhpC/TSA family BEN76_09340 PF00210 Ferritin-like domain BEN76_09350 PF00533 BRCA1 C Terminus (BRCT) domain BEN76_09350 PF12826 Helix-hairpin-helix motif BEN76_09350 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BEN76_09350 PF03120 NAD-dependent DNA ligase OB-fold domain BEN76_09350 PF01653 NAD-dependent DNA ligase adenylation domain BEN76_09360 PF02463 RecF/RecN/SMC N terminal domain BEN76_09360 PF06470 SMC proteins Flexible Hinge Domain BEN76_09370 PF01925 Sulfite exporter TauE/SafE BEN76_09375 PF08279 HTH domain BEN76_09375 PF03099 Biotin/lipoate A/B protein ligase family BEN76_09375 PF02237 Biotin protein ligase C terminal domain BEN76_09380 PF03309 Type III pantothenate kinase BEN76_09385 PF00448 SRP54-type protein, GTPase domain BEN76_09385 PF02978 Signal peptide binding domain BEN76_09385 PF02881 SRP54-type protein, helical bundle domain BEN76_09395 PF01207 Dihydrouridine synthase (Dus) BEN76_09410 PF01507 Phosphoadenosine phosphosulfate reductase family BEN76_09415 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BEN76_09415 PF06974 Protein of unknown function (DUF1298) BEN76_09420 PF10150 Ribonuclease E/G family BEN76_09420 PF00575 S1 RNA binding domain BEN76_09425 PF02545 Maf-like protein BEN76_09435 PF04085 rod shape-determining protein MreC BEN76_09445 PF02686 Glu-tRNAGln amidotransferase C subunit BEN76_09450 PF01425 Amidase BEN76_09455 PF02934 GatB/GatE catalytic domain BEN76_09455 PF02637 GatB domain BEN76_09490 PF03466 LysR substrate binding domain BEN76_09490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_09510 PF05992 SbmA/BacA-like family BEN76_09515 PF01965 DJ-1/PfpI family BEN76_09520 PF01734 Patatin-like phospholipase BEN76_09525 PF01235 Sodium:alanine symporter family BEN76_09530 PF03616 Sodium/glutamate symporter BEN76_09535 PF00881 Nitroreductase family BEN76_09540 PF07690 Major Facilitator Superfamily BEN76_09545 PF12805 FUSC-like inner membrane protein yccS BEN76_09555 PF00258 Flavodoxin BEN76_09555 PF00175 Oxidoreductase NAD-binding domain BEN76_09555 PF00667 FAD binding domain BEN76_09605 PF04304 Protein of unknown function (DUF454) BEN76_09620 PF07687 Peptidase dimerisation domain BEN76_09620 PF01546 Peptidase family M20/M25/M40 BEN76_09625 PF07194 P2 response regulator binding domain BEN76_09625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_09625 PF02895 Signal transducing histidine kinase, homodimeric domain BEN76_09625 PF01584 CheW-like domain BEN76_09625 PF01627 Hpt domain BEN76_09630 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BEN76_09630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BEN76_09635 PF01584 CheW-like domain BEN76_09640 PF00072 Response regulator receiver domain BEN76_09645 PF00072 Response regulator receiver domain BEN76_09660 PF00873 AcrB/AcrD/AcrF family BEN76_09665 PF04073 Aminoacyl-tRNA editing domain BEN76_09665 PF03129 Anticodon binding domain BEN76_09665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN76_09700 PF01048 Phosphorylase superfamily BEN76_09705 PF10609 NUBPL iron-transfer P-loop NTPase BEN76_09720 PF03502 Nucleoside-specific channel-forming protein, Tsx BEN76_09725 PF01588 Putative tRNA binding domain BEN76_09725 PF09334 tRNA synthetases class I (M) BEN76_09740 PF00860 Permease family BEN76_09745 PF00324 Amino acid permease BEN76_09750 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BEN76_09755 PF04996 Succinylarginine dihydrolase BEN76_09760 PF00171 Aldehyde dehydrogenase family BEN76_09765 PF04958 Arginine N-succinyltransferase beta subunit BEN76_09770 PF00202 Aminotransferase class-III BEN76_09775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEN76_09775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEN76_09790 PF01810 LysE type translocator BEN76_09795 PF08241 Methyltransferase domain BEN76_09810 PF13533 Biotin-lipoyl like BEN76_09835 PF05552 Conserved TM helix BEN76_09850 PF00970 Oxidoreductase FAD-binding domain BEN76_09850 PF00175 Oxidoreductase NAD-binding domain BEN76_09855 PF03466 LysR substrate binding domain BEN76_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_09865 PF00361 Proton-conducting membrane transporter BEN76_09870 PF00361 Proton-conducting membrane transporter BEN76_09875 PF00361 Proton-conducting membrane transporter BEN76_09875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEN76_09880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEN76_09885 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BEN76_09890 PF12838 4Fe-4S dicluster domain BEN76_09895 PF00146 NADH dehydrogenase BEN76_09900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEN76_09900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BEN76_09900 PF00384 Molybdopterin oxidoreductase BEN76_09905 PF10531 SLBB domain BEN76_09905 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BEN76_09905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BEN76_09915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BEN76_09915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BEN76_09920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BEN76_09925 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BEN76_09930 PF00990 Diguanylate cyclase, GGDEF domain BEN76_09940 PF00512 His Kinase A (phospho-acceptor) domain BEN76_09940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_09940 PF00672 HAMP domain BEN76_09945 PF00486 Transcriptional regulatory protein, C terminal BEN76_09945 PF00072 Response regulator receiver domain BEN76_09950 PF00317 Ribonucleotide reductase, all-alpha domain BEN76_09950 PF03477 ATP cone domain BEN76_09950 PF02867 Ribonucleotide reductase, barrel domain BEN76_09955 PF00268 Ribonucleotide reductase, small chain BEN76_09960 PF07411 Domain of unknown function (DUF1508) BEN76_09965 PF00293 NUDIX domain BEN76_09970 PF08274 PhnA Zinc-Ribbon BEN76_09970 PF03831 PhnA domain BEN76_09985 PF00849 RNA pseudouridylate synthase BEN76_09990 PF01571 Aminomethyltransferase folate-binding domain BEN76_09995 PF10411 Disulfide bond isomerase protein N-terminus BEN76_09995 PF13098 Thioredoxin-like domain BEN76_10000 PF01177 Asp/Glu/Hydantoin racemase BEN76_10005 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BEN76_10020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN76_10025 PF00593 TonB dependent receptor BEN76_10025 PF07715 TonB-dependent Receptor Plug Domain BEN76_10030 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BEN76_10030 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BEN76_10030 PF06827 Zinc finger found in FPG and IleRS BEN76_10035 PF09312 SurA N-terminal domain BEN76_10035 PF00639 PPIC-type PPIASE domain BEN76_10045 PF01741 Large-conductance mechanosensitive channel, MscL BEN76_10055 PF00860 Permease family BEN76_10060 PF05175 Methyltransferase small domain BEN76_10060 PF08468 Methyltransferase small domain N-terminal BEN76_10065 PF00324 Amino acid permease BEN76_10070 PF13505 Outer membrane protein beta-barrel domain BEN76_10070 PF00691 OmpA family BEN76_10080 PF00108 Thiolase, N-terminal domain BEN76_10080 PF02803 Thiolase, C-terminal domain BEN76_10090 PF00893 Small Multidrug Resistance protein BEN76_10100 PF05275 Copper resistance protein B precursor (CopB) BEN76_10105 PF07731 Multicopper oxidase BEN76_10105 PF07732 Multicopper oxidase BEN76_10105 PF00394 Multicopper oxidase BEN76_10115 PF00834 Ribulose-phosphate 3 epimerase family BEN76_10125 PF00756 Putative esterase BEN76_10135 PF04445 Putative SAM-dependent methyltransferase BEN76_10140 PF00814 Glycoprotease family BEN76_10145 PF00132 Bacterial transferase hexapeptide (six repeats) BEN76_10150 PF00293 NUDIX domain BEN76_10190 PF00425 chorismate binding enzyme BEN76_10190 PF04715 Anthranilate synthase component I, N terminal region BEN76_10195 PF00155 Aminotransferase class I and II BEN76_10200 PF00815 Histidinol dehydrogenase BEN76_10210 PF13276 HTH-like domain BEN76_10210 PF00665 Integrase core domain BEN76_10210 PF13333 Integrase core domain BEN76_10215 PF01634 ATP phosphoribosyltransferase BEN76_10220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BEN76_10225 PF01722 BolA-like protein BEN76_10230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BEN76_10235 PF00309 Sigma-54 factor, Activator interacting domain (AID) BEN76_10235 PF04963 Sigma-54 factor, core binding domain BEN76_10235 PF04552 Sigma-54, DNA binding domain BEN76_10280 PF00795 Carbon-nitrogen hydrolase BEN76_10285 PF01047 MarR family BEN76_10290 PF02566 OsmC-like protein BEN76_10295 PF00437 Type II/IV secretion system protein BEN76_10315 PF01367 5'-3' exonuclease, C-terminal SAM fold BEN76_10315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BEN76_10315 PF00476 DNA polymerase family A BEN76_10315 PF01612 3'-5' exonuclease BEN76_10320 PF02325 YGGT family BEN76_10325 PF03807 NADP oxidoreductase coenzyme F420-dependent BEN76_10325 PF14748 Pyrroline-5-carboxylate reductase dimerisation BEN76_10330 PF11734 TilS substrate C-terminal domain BEN76_10330 PF09179 TilS substrate binding domain BEN76_10330 PF01171 PP-loop family BEN76_10335 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BEN76_10340 PF02541 Ppx/GppA phosphatase family BEN76_10345 PF00085 Thioredoxin BEN76_10350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN76_10350 PF07498 Rho termination factor, N-terminal domain BEN76_10350 PF07497 Rho termination factor, RNA-binding domain BEN76_10360 PF00216 Bacterial DNA-binding protein BEN76_10365 PF03147 Ferredoxin-fold anticodon binding domain BEN76_10365 PF03483 B3/4 domain BEN76_10365 PF03484 tRNA synthetase B5 domain BEN76_10365 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BEN76_10365 PF01588 Putative tRNA binding domain BEN76_10370 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BEN76_10370 PF01409 tRNA synthetases class II core domain (F) BEN76_10385 PF00453 Ribosomal protein L20 BEN76_10390 PF01632 Ribosomal protein L35 BEN76_10395 PF07690 Major Facilitator Superfamily BEN76_10405 PF09335 SNARE associated Golgi protein BEN76_10410 PF00043 Glutathione S-transferase, C-terminal domain BEN76_10410 PF02798 Glutathione S-transferase, N-terminal domain BEN76_10415 PF00011 Hsp20/alpha crystallin family BEN76_10420 PF00707 Translation initiation factor IF-3, C-terminal domain BEN76_10420 PF05198 Translation initiation factor IF-3, N-terminal domain BEN76_10425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BEN76_10425 PF03129 Anticodon binding domain BEN76_10425 PF02824 TGS domain BEN76_10425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BEN76_10430 PF13193 AMP-binding enzyme C-terminal domain BEN76_10430 PF00501 AMP-binding enzyme BEN76_10435 PF04751 Protein of unknown function (DUF615) BEN76_10440 PF00381 PTS HPr component phosphorylation site BEN76_10445 PF03668 P-loop ATPase protein family BEN76_10450 PF02569 Pantoate-beta-alanine ligase BEN76_10455 PF02548 Ketopantoate hydroxymethyltransferase BEN76_10460 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BEN76_10465 PF01743 Poly A polymerase head domain BEN76_10465 PF12626 Polymerase A arginine-rich C-terminus BEN76_10465 PF12627 Probable RNA and SrmB- binding site of polymerase A BEN76_10470 PF10531 SLBB domain BEN76_10475 PF03819 MazG nucleotide pyrophosphohydrolase domain BEN76_10485 PF02824 TGS domain BEN76_10485 PF04607 Region found in RelA / SpoT proteins BEN76_10485 PF13291 ACT domain BEN76_10490 PF01938 TRAM domain BEN76_10490 PF05958 tRNA (Uracil-5-)-methyltransferase BEN76_10500 PF00291 Pyridoxal-phosphate dependent enzyme BEN76_10505 PF00072 Response regulator receiver domain BEN76_10505 PF01627 Hpt domain BEN76_10505 PF00512 His Kinase A (phospho-acceptor) domain BEN76_10505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_10505 PF00672 HAMP domain BEN76_10505 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BEN76_10510 PF00378 Enoyl-CoA hydratase/isomerase BEN76_10515 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BEN76_10515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BEN76_10520 PF01261 Xylose isomerase-like TIM barrel BEN76_10535 PF02233 NAD(P) transhydrogenase beta subunit BEN76_10540 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BEN76_10545 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BEN76_10545 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BEN76_10555 PF00376 MerR family regulatory protein BEN76_10555 PF09278 MerR, DNA binding BEN76_10565 PF07690 Major Facilitator Superfamily BEN76_10570 PF01207 Dihydrouridine synthase (Dus) BEN76_10580 PF00899 ThiF family BEN76_10585 PF00330 Aconitase family (aconitate hydratase) BEN76_10585 PF00694 Aconitase C-terminal domain BEN76_10590 PF01026 TatD related DNase BEN76_10605 PF16658 Class II release factor RF3, C-terminal domain BEN76_10605 PF03144 Elongation factor Tu domain 2 BEN76_10605 PF00009 Elongation factor Tu GTP binding domain BEN76_10610 PF03707 Bacterial signalling protein N terminal repeat BEN76_10610 PF00990 Diguanylate cyclase, GGDEF domain BEN76_10610 PF00563 EAL domain BEN76_10615 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BEN76_10615 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BEN76_10620 PF10369 Small subunit of acetolactate synthase BEN76_10625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEN76_10625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEN76_10625 PF00205 Thiamine pyrophosphate enzyme, central domain BEN76_10635 PF08264 Anticodon-binding domain of tRNA BEN76_10635 PF09334 tRNA synthetases class I (M) BEN76_10635 PF13603 Leucyl-tRNA synthetase, Domain 2 BEN76_10635 PF00133 tRNA synthetases class I (I, L, M and V) BEN76_10650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN76_10655 PF12704 MacB-like periplasmic core domain BEN76_10655 PF00005 ABC transporter BEN76_10655 PF02687 FtsX-like permease family BEN76_10660 PF02321 Outer membrane efflux protein BEN76_10670 PF03781 Sulfatase-modifying factor enzyme 1 BEN76_10675 PF03781 Sulfatase-modifying factor enzyme 1 BEN76_10680 PF03781 Sulfatase-modifying factor enzyme 1 BEN76_10690 PF04717 Type VI secretion system, phage-baseplate injector BEN76_10705 PF00929 Exonuclease BEN76_10710 PF03193 RsgA GTPase BEN76_10720 PF00462 Glutaredoxin BEN76_10725 PF02556 Preprotein translocase subunit SecB BEN76_10730 PF07361 Cytochrome b562 BEN76_10735 PF04127 DNA / pantothenate metabolism flavoprotein BEN76_10735 PF02441 Flavoprotein BEN76_10740 PF04002 RadC-like JAB domain BEN76_10745 PF01062 Bestrophin, RFP-TM, chloride channel BEN76_10755 PF04279 Intracellular septation protein A BEN76_10760 PF03795 YCII-related domain BEN76_10770 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BEN76_10770 PF01266 FAD dependent oxidoreductase BEN76_10775 PF00581 Rhodanese-like domain BEN76_10780 PF04461 Protein of unknown function (DUF520) BEN76_10790 PF03061 Thioesterase superfamily BEN76_10795 PF00085 Thioredoxin BEN76_10800 PF00561 alpha/beta hydrolase fold BEN76_10805 PF04273 Putative phosphatase (DUF442) BEN76_10805 PF00753 Metallo-beta-lactamase superfamily BEN76_10815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BEN76_10815 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_10820 PF01048 Phosphorylase superfamily BEN76_10855 PF01066 CDP-alcohol phosphatidyltransferase BEN76_10860 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BEN76_10880 PF00056 lactate/malate dehydrogenase, NAD binding domain BEN76_10880 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BEN76_10890 PF01551 Peptidase family M23 BEN76_10890 PF01464 Transglycosylase SLT domain BEN76_10890 PF10145 Phage-related minor tail protein BEN76_10895 PF00919 Uncharacterized protein family UPF0004 BEN76_10895 PF01938 TRAM domain BEN76_10895 PF04055 Radical SAM superfamily BEN76_10900 PF02562 PhoH-like protein BEN76_10905 PF02130 Uncharacterized protein family UPF0054 BEN76_10930 PF01810 LysE type translocator BEN76_10935 PF03358 NADPH-dependent FMN reductase BEN76_10940 PF03631 Virulence factor BrkB BEN76_10945 PF03466 LysR substrate binding domain BEN76_10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_10950 PF07690 Major Facilitator Superfamily BEN76_10955 PF01557 Fumarylacetoacetate (FAA) hydrolase family BEN76_10990 PF17876 Cold shock domain BEN76_10990 PF00575 S1 RNA binding domain BEN76_10990 PF00773 RNB domain BEN76_10990 PF08461 Ribonuclease R winged-helix domain BEN76_10990 PF08206 Ribonuclease B OB domain BEN76_10995 PF01432 Peptidase family M3 BEN76_11000 PF09526 Probable metal-binding protein (DUF2387) BEN76_11025 PF03937 Flavinator of succinate dehydrogenase BEN76_11030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_11030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_11030 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_11035 PF00743 Flavin-binding monooxygenase-like BEN76_11040 PF01196 Ribosomal protein L17 BEN76_11045 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BEN76_11045 PF01000 RNA polymerase Rpb3/RpoA insert domain BEN76_11045 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BEN76_11050 PF00163 Ribosomal protein S4/S9 N-terminal domain BEN76_11050 PF01479 S4 domain BEN76_11055 PF00411 Ribosomal protein S11 BEN76_11060 PF00416 Ribosomal protein S13/S18 BEN76_11065 PF00444 Ribosomal protein L36 BEN76_11070 PF00344 SecY translocase BEN76_11075 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BEN76_11080 PF00327 Ribosomal protein L30p/L7e BEN76_11085 PF03719 Ribosomal protein S5, C-terminal domain BEN76_11085 PF00333 Ribosomal protein S5, N-terminal domain BEN76_11090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BEN76_11095 PF00347 Ribosomal protein L6 BEN76_11100 PF00410 Ribosomal protein S8 BEN76_11105 PF00253 Ribosomal protein S14p/S29e BEN76_11110 PF00673 ribosomal L5P family C-terminus BEN76_11110 PF00281 Ribosomal protein L5 BEN76_11115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BEN76_11115 PF00467 KOW motif BEN76_11120 PF00238 Ribosomal protein L14p/L23e BEN76_11125 PF00366 Ribosomal protein S17 BEN76_11130 PF00831 Ribosomal L29 protein BEN76_11135 PF00252 Ribosomal protein L16p/L10e BEN76_11140 PF07650 KH domain BEN76_11140 PF00189 Ribosomal protein S3, C-terminal domain BEN76_11145 PF00237 Ribosomal protein L22p/L17e BEN76_11150 PF00203 Ribosomal protein S19 BEN76_11155 PF03947 Ribosomal Proteins L2, C-terminal domain BEN76_11155 PF00181 Ribosomal Proteins L2, RNA binding domain BEN76_11160 PF00276 Ribosomal protein L23 BEN76_11165 PF00573 Ribosomal protein L4/L1 family BEN76_11170 PF00297 Ribosomal protein L3 BEN76_11175 PF00338 Ribosomal protein S10p/S20e BEN76_11180 PF00117 Glutamine amidotransferase class-I BEN76_11180 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BEN76_11185 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN76_11190 PF05872 Bacterial protein of unknown function (DUF853) BEN76_11195 PF00970 Oxidoreductase FAD-binding domain BEN76_11195 PF00175 Oxidoreductase NAD-binding domain BEN76_11195 PF00042 Globin BEN76_11200 PF02082 Transcriptional regulator BEN76_11205 PF01926 50S ribosome-binding GTPase BEN76_11215 PF00375 Sodium:dicarboxylate symporter family BEN76_11225 PF01553 Acyltransferase BEN76_11240 PF00271 Helicase conserved C-terminal domain BEN76_11240 PF00270 DEAD/DEAH box helicase BEN76_11240 PF17191 RecG wedge domain BEN76_11245 PF00156 Phosphoribosyl transferase domain BEN76_11255 PF03641 Possible lysine decarboxylase BEN76_11260 PF01544 CorA-like Mg2+ transporter protein BEN76_11280 PF02405 Permease MlaE BEN76_11285 PF00005 ABC transporter BEN76_11290 PF00271 Helicase conserved C-terminal domain BEN76_11290 PF00270 DEAD/DEAH box helicase BEN76_11295 PF00459 Inositol monophosphatase family BEN76_11300 PF02779 Transketolase, pyrimidine binding domain BEN76_11300 PF02780 Transketolase, C-terminal domain BEN76_11300 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BEN76_11305 PF00925 GTP cyclohydrolase II BEN76_11310 PF01218 Coproporphyrinogen III oxidase BEN76_11320 PF00753 Metallo-beta-lactamase superfamily BEN76_11325 PF00762 Ferrochelatase BEN76_11335 PF01177 Asp/Glu/Hydantoin racemase BEN76_11355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_11355 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_11355 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN76_11355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_11365 PF04024 PspC domain BEN76_11380 PF02091 Glycyl-tRNA synthetase alpha subunit BEN76_11385 PF02092 Glycyl-tRNA synthetase beta subunit BEN76_11385 PF05746 DALR anticodon binding domain BEN76_11395 PF00854 POT family BEN76_11400 PF00892 EamA-like transporter family BEN76_11405 PF03466 LysR substrate binding domain BEN76_11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_11420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN76_11420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN76_11435 PF00248 Aldo/keto reductase family BEN76_11460 PF13614 AAA domain BEN76_11465 PF01594 AI-2E family transporter BEN76_11475 PF12805 FUSC-like inner membrane protein yccS BEN76_11480 PF07690 Major Facilitator Superfamily BEN76_11485 PF02525 Flavodoxin-like fold BEN76_11490 PF03992 Antibiotic biosynthesis monooxygenase BEN76_11495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEN76_11500 PF05643 Putative bacterial lipoprotein (DUF799) BEN76_11510 PF03783 Curli production assembly/transport component CsgG BEN76_11520 PF01565 FAD binding domain BEN76_11520 PF02913 FAD linked oxidases, C-terminal domain BEN76_11525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BEN76_11525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BEN76_11530 PF00892 EamA-like transporter family BEN76_11535 PF00892 EamA-like transporter family BEN76_11545 PF01925 Sulfite exporter TauE/SafE BEN76_11550 PF09157 Pseudouridine synthase II TruB, C-terminal BEN76_11550 PF01509 TruB family pseudouridylate synthase (N terminal domain) BEN76_11550 PF16198 tRNA pseudouridylate synthase B C-terminal domain BEN76_11555 PF03280 Proteobacterial lipase chaperone protein BEN76_11560 PF00561 alpha/beta hydrolase fold BEN76_11565 PF01245 Ribosomal protein L19 BEN76_11570 PF01746 tRNA (Guanine-1)-methyltransferase BEN76_11575 PF05239 PRC-barrel domain BEN76_11575 PF01782 RimM N-terminal domain BEN76_11580 PF00886 Ribosomal protein S16 BEN76_11585 PF07963 Prokaryotic N-terminal methylation motif BEN76_11585 PF00114 Pilin (bacterial filament) BEN76_11590 PF07963 Prokaryotic N-terminal methylation motif BEN76_11590 PF00114 Pilin (bacterial filament) BEN76_11615 PF07963 Prokaryotic N-terminal methylation motif BEN76_11615 PF00114 Pilin (bacterial filament) BEN76_11620 PF02401 LytB protein BEN76_11625 PF00625 Guanylate kinase BEN76_11630 PF01192 RNA polymerase Rpb6 BEN76_11640 PF04607 Region found in RelA / SpoT proteins BEN76_11640 PF13291 ACT domain BEN76_11640 PF02824 TGS domain BEN76_11645 PF01042 Endoribonuclease L-PSP BEN76_11650 PF04324 BFD-like [2Fe-2S] binding domain BEN76_11655 PF00210 Ferritin-like domain BEN76_11660 PF15864 Protein glycosylation ligase BEN76_11660 PF04932 O-Antigen ligase BEN76_11660 PF11846 Virulence factor membrane-bound polymerase, C-terminal BEN76_11665 PF07963 Prokaryotic N-terminal methylation motif BEN76_11665 PF00114 Pilin (bacterial filament) BEN76_11670 PF00795 Carbon-nitrogen hydrolase BEN76_11675 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BEN76_11675 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BEN76_11675 PF01276 Orn/Lys/Arg decarboxylase, major domain BEN76_11680 PF01820 D-ala D-ala ligase N-terminus BEN76_11680 PF07478 D-ala D-ala ligase C-terminus BEN76_11695 PF04536 TPM domain BEN76_11700 PF04011 LemA family BEN76_11710 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BEN76_11710 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_11715 PF00310 Glutamine amidotransferases class-II BEN76_11715 PF04898 Glutamate synthase central domain BEN76_11715 PF01645 Conserved region in glutamate synthase BEN76_11715 PF01493 GXGXG motif BEN76_11725 PF01761 3-dehydroquinate synthase BEN76_11730 PF01202 Shikimate kinase BEN76_11735 PF11741 AMIN domain BEN76_11735 PF00263 Bacterial type II and III secretion system protein BEN76_11735 PF03958 Bacterial type II/III secretion system short domain BEN76_11735 PF07660 Secretin and TonB N terminus short domain BEN76_11760 PF00905 Penicillin binding protein transpeptidase domain BEN76_11760 PF17092 Penicillin-binding protein OB-like domain BEN76_11760 PF00912 Transglycosylase BEN76_11765 PF13847 Methyltransferase domain BEN76_11770 PF00953 Glycosyl transferase family 4 BEN76_11775 PF02875 Mur ligase family, glutamate ligase domain BEN76_11775 PF08245 Mur ligase middle domain BEN76_11775 PF01225 Mur ligase family, catalytic domain BEN76_11780 PF01225 Mur ligase family, catalytic domain BEN76_11780 PF02875 Mur ligase family, glutamate ligase domain BEN76_11780 PF08245 Mur ligase middle domain BEN76_11785 PF03717 Penicillin-binding Protein dimerisation domain BEN76_11785 PF00905 Penicillin binding protein transpeptidase domain BEN76_11795 PF01795 MraW methylase family BEN76_11810 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN76_11830 PF01545 Cation efflux family BEN76_11835 PF00873 AcrB/AcrD/AcrF family BEN76_11840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN76_11840 PF00529 HlyD membrane-fusion protein of T1SS BEN76_11855 PF12848 ABC transporter BEN76_11855 PF00005 ABC transporter BEN76_11860 PF00205 Thiamine pyrophosphate enzyme, central domain BEN76_11860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BEN76_11860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BEN76_11865 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN76_11870 PF00106 short chain dehydrogenase BEN76_11880 PF00575 S1 RNA binding domain BEN76_11880 PF09371 Tex-like protein N-terminal domain BEN76_11880 PF16921 Tex protein YqgF-like domain BEN76_11880 PF17674 HHH domain BEN76_11885 PF00486 Transcriptional regulatory protein, C terminal BEN76_11885 PF00072 Response regulator receiver domain BEN76_11890 PF00672 HAMP domain BEN76_11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_11890 PF00512 His Kinase A (phospho-acceptor) domain BEN76_11895 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BEN76_11895 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BEN76_11900 PF00583 Acetyltransferase (GNAT) family BEN76_11925 PF00475 Imidazoleglycerol-phosphate dehydratase BEN76_11930 PF00117 Glutamine amidotransferase class-I BEN76_11940 PF00977 Histidine biosynthesis protein BEN76_11945 PF00668 Condensation domain BEN76_11945 PF13193 AMP-binding enzyme C-terminal domain BEN76_11945 PF00975 Thioesterase domain BEN76_11945 PF00501 AMP-binding enzyme BEN76_11945 PF00550 Phosphopantetheine attachment site BEN76_11950 PF00005 ABC transporter BEN76_11950 PF00664 ABC transporter transmembrane region BEN76_11965 PF01636 Phosphotransferase enzyme family BEN76_11970 PF00977 Histidine biosynthesis protein BEN76_12000 PF02705 K+ potassium transporter BEN76_12030 PF12102 Domain of unknown function (DUF3578) BEN76_12030 PF07728 AAA domain (dynein-related subfamily) BEN76_12065 PF00999 Sodium/hydrogen exchanger family BEN76_12065 PF02254 TrkA-N domain BEN76_12085 PF01593 Flavin containing amine oxidoreductase BEN76_12095 PF00171 Aldehyde dehydrogenase family BEN76_12100 PF00202 Aminotransferase class-III BEN76_12105 PF00155 Aminotransferase class I and II BEN76_12105 PF00392 Bacterial regulatory proteins, gntR family BEN76_12110 PF00324 Amino acid permease BEN76_12115 PF00436 Single-strand binding protein family BEN76_12120 PF07690 Major Facilitator Superfamily BEN76_12130 PF08543 Phosphomethylpyrimidine kinase BEN76_12130 PF02581 Thiamine monophosphate synthase BEN76_12130 PF03070 TENA/THI-4/PQQC family BEN76_12135 PF06942 GlpM protein BEN76_12150 PF17760 UvrA interaction domain BEN76_12150 PF17755 UvrA DNA-binding domain BEN76_12150 PF00005 ABC transporter BEN76_12155 PF00990 Diguanylate cyclase, GGDEF domain BEN76_12155 PF08448 PAS fold BEN76_12165 PF02028 BCCT, betaine/carnitine/choline family transporter BEN76_12180 PF00474 Sodium:solute symporter family BEN76_12185 PF04341 Protein of unknown function, DUF485 BEN76_12190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_12190 PF00512 His Kinase A (phospho-acceptor) domain BEN76_12190 PF09308 LuxQ, periplasmic BEN76_12190 PF00072 Response regulator receiver domain BEN76_12200 PF00072 Response regulator receiver domain BEN76_12200 PF00196 Bacterial regulatory proteins, luxR family BEN76_12205 PF03358 NADPH-dependent FMN reductase BEN76_12210 PF00296 Luciferase-like monooxygenase BEN76_12215 PF00857 Isochorismatase family BEN76_12220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_12220 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEN76_12225 PF13193 AMP-binding enzyme C-terminal domain BEN76_12225 PF00501 AMP-binding enzyme BEN76_12225 PF16177 Acetyl-coenzyme A synthetase N-terminus BEN76_12230 PF05656 Protein of unknown function (DUF805) BEN76_12235 PF00924 Mechanosensitive ion channel BEN76_12245 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BEN76_12250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BEN76_12260 PF03462 PCRF domain BEN76_12260 PF00472 RF-1 domain BEN76_12270 PF17768 RecJ OB domain BEN76_12270 PF02272 DHHA1 domain BEN76_12270 PF01368 DHH family BEN76_12275 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BEN76_12275 PF01243 Pyridoxamine 5'-phosphate oxidase BEN76_12280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN76_12280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN76_12280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN76_12280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN76_12285 PF00478 IMP dehydrogenase / GMP reductase domain BEN76_12285 PF00571 CBS domain BEN76_12295 PF01169 Uncharacterized protein family UPF0016 BEN76_12300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BEN76_12300 PF00364 Biotin-requiring enzyme BEN76_12300 PF02817 e3 binding domain BEN76_12305 PF17831 Pyruvate dehydrogenase E1 component middle domain BEN76_12305 PF00456 Transketolase, thiamine diphosphate binding domain BEN76_12320 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BEN76_12325 PF12327 FtsZ family, C-terminal domain BEN76_12325 PF00091 Tubulin/FtsZ family, GTPase domain BEN76_12330 PF02491 SHS2 domain inserted in FTSA BEN76_12335 PF03799 Cell division protein FtsQ BEN76_12335 PF08478 POTRA domain, FtsQ-type BEN76_12340 PF07478 D-ala D-ala ligase C-terminus BEN76_12340 PF01820 D-ala D-ala ligase N-terminus BEN76_12345 PF08245 Mur ligase middle domain BEN76_12345 PF02875 Mur ligase family, glutamate ligase domain BEN76_12345 PF01225 Mur ligase family, catalytic domain BEN76_12350 PF03033 Glycosyltransferase family 28 N-terminal domain BEN76_12350 PF04101 Glycosyltransferase family 28 C-terminal domain BEN76_12355 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BEN76_12355 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BEN76_12360 PF00925 GTP cyclohydrolase II BEN76_12380 PF01613 Flavin reductase like domain BEN76_12385 PF08267 Cobalamin-independent synthase, N-terminal domain BEN76_12385 PF01717 Cobalamin-independent synthase, Catalytic domain BEN76_12395 PF00156 Phosphoribosyl transferase domain BEN76_12400 PF03372 Endonuclease/Exonuclease/phosphatase family BEN76_12415 PF07859 alpha/beta hydrolase fold BEN76_12420 PF07694 5TMR of 5TMR-LYT BEN76_12420 PF00990 Diguanylate cyclase, GGDEF domain BEN76_12425 PF11412 Disulphide bond corrector protein DsbC BEN76_12425 PF02683 Cytochrome C biogenesis protein transmembrane region BEN76_12455 PF00576 HIUase/Transthyretin family BEN76_12465 PF01494 FAD binding domain BEN76_12470 PF03561 Allantoicase repeat BEN76_12475 PF04115 Ureidoglycolate lyase BEN76_12490 PF00986 DNA gyrase B subunit, carboxyl terminus BEN76_12490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_12490 PF01751 Toprim domain BEN76_12490 PF00204 DNA gyrase B BEN76_12495 PF05728 Uncharacterised protein family (UPF0227) BEN76_12505 PF02600 Disulfide bond formation protein DsbB BEN76_12510 PF04262 Glutamate-cysteine ligase BEN76_12525 PF04286 Protein of unknown function (DUF445) BEN76_12530 PF00155 Aminotransferase class I and II BEN76_12535 PF01554 MatE BEN76_12540 PF00106 short chain dehydrogenase BEN76_12550 PF00072 Response regulator receiver domain BEN76_12550 PF00486 Transcriptional regulatory protein, C terminal BEN76_12555 PF00989 PAS fold BEN76_12555 PF11808 Phosphate regulon sensor protein PhoR BEN76_12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_12555 PF00512 His Kinase A (phospho-acceptor) domain BEN76_12560 PF03969 AFG1-like ATPase BEN76_12570 PF02666 Phosphatidylserine decarboxylase BEN76_12575 PF00581 Rhodanese-like domain BEN76_12580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BEN76_12580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BEN76_12585 PF02580 D-Tyr-tRNA(Tyr) deacylase BEN76_12620 PF00925 GTP cyclohydrolase II BEN76_12620 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BEN76_12625 PF00885 6,7-dimethyl-8-ribityllumazine synthase BEN76_12630 PF01029 NusB family BEN76_12635 PF02769 AIR synthase related protein, C-terminal domain BEN76_12635 PF00586 AIR synthase related protein, N-terminal domain BEN76_12640 PF04608 Phosphatidylglycerophosphatase A BEN76_12645 PF00132 Bacterial transferase hexapeptide (six repeats) BEN76_12645 PF14602 Hexapeptide repeat of succinyl-transferase BEN76_12645 PF12804 MobA-like NTP transferase domain BEN76_12650 PF01380 SIS domain BEN76_12655 PF08722 TnsA endonuclease N terminal BEN76_12655 PF08721 TnsA endonuclease C terminal BEN76_12660 PF00665 Integrase core domain BEN76_12665 PF13401 AAA domain BEN76_12665 PF11426 Tn7 transposition regulator TnsC BEN76_12670 PF15978 Tn7-like transposition protein D BEN76_12670 PF06527 TniQ BEN76_12685 PF00005 ABC transporter BEN76_12685 PF00664 ABC transporter transmembrane region BEN76_12685 PF04954 Siderophore-interacting protein BEN76_12685 PF08021 Siderophore-interacting FAD-binding domain BEN76_12690 PF00005 ABC transporter BEN76_12695 PF01032 FecCD transport family BEN76_12700 PF01032 FecCD transport family BEN76_12705 PF00005 ABC transporter BEN76_12710 PF01497 Periplasmic binding protein BEN76_12715 PF07715 TonB-dependent Receptor Plug Domain BEN76_12715 PF00593 TonB dependent receptor BEN76_12720 PF01475 Ferric uptake regulator family BEN76_12730 PF02463 RecF/RecN/SMC N terminal domain BEN76_12730 PF06470 SMC proteins Flexible Hinge Domain BEN76_12735 PF00580 UvrD/REP helicase N-terminal domain BEN76_12735 PF13361 UvrD-like helicase C-terminal domain BEN76_12735 PF12705 PD-(D/E)XK nuclease superfamily BEN76_12745 PF02798 Glutathione S-transferase, N-terminal domain BEN76_12745 PF14497 Glutathione S-transferase, C-terminal domain BEN76_12760 PF04463 Protein of unknown function (DUF523) BEN76_12785 PF01758 Sodium Bile acid symporter family BEN76_12790 PF00857 Isochorismatase family BEN76_12795 PF00701 Dihydrodipicolinate synthetase family BEN76_12805 PF01259 SAICAR synthetase BEN76_12810 PF13276 HTH-like domain BEN76_12810 PF00665 Integrase core domain BEN76_12810 PF13333 Integrase core domain BEN76_12825 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_12830 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_12835 PF00005 ABC transporter BEN76_12840 PF01226 Formate/nitrite transporter BEN76_12845 PF00990 Diguanylate cyclase, GGDEF domain BEN76_12845 PF03707 Bacterial signalling protein N terminal repeat BEN76_12845 PF00563 EAL domain BEN76_12855 PF00004 ATPase family associated with various cellular activities (AAA) BEN76_12855 PF16193 AAA C-terminal domain BEN76_12855 PF12002 MgsA AAA+ ATPase C terminal BEN76_12860 PF00144 Beta-lactamase BEN76_12865 PF07995 Glucose / Sorbosone dehydrogenase BEN76_12870 PF13411 MerR HTH family regulatory protein BEN76_12880 PF03692 Putative zinc- or iron-chelating domain BEN76_12885 PF07043 Protein of unknown function (DUF1328) BEN76_12895 PF01230 HIT domain BEN76_12900 PF00730 HhH-GPD superfamily base excision DNA repair protein BEN76_12900 PF00633 Helix-hairpin-helix motif BEN76_12900 PF14815 NUDIX domain BEN76_12915 PF03352 Methyladenine glycosylase BEN76_12920 PF08240 Alcohol dehydrogenase GroES-like domain BEN76_12920 PF00107 Zinc-binding dehydrogenase BEN76_12925 PF00155 Aminotransferase class I and II BEN76_12925 PF00392 Bacterial regulatory proteins, gntR family BEN76_12935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_12935 PF03466 LysR substrate binding domain BEN76_12940 PF00248 Aldo/keto reductase family BEN76_12945 PF07690 Major Facilitator Superfamily BEN76_12955 PF05173 Dihydrodipicolinate reductase, C-terminus BEN76_12955 PF01113 Dihydrodipicolinate reductase, N-terminus BEN76_12960 PF00684 DnaJ central domain BEN76_12960 PF00226 DnaJ domain BEN76_12960 PF01556 DnaJ C terminal domain BEN76_12970 PF00873 AcrB/AcrD/AcrF family BEN76_12980 PF00440 Bacterial regulatory proteins, tetR family BEN76_12985 PF00311 Phosphoenolpyruvate carboxylase BEN76_12990 PF00860 Permease family BEN76_12995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_12995 PF03466 LysR substrate binding domain BEN76_13005 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_13015 PF00920 Dehydratase family BEN76_13020 PF02911 Formyl transferase, C-terminal domain BEN76_13020 PF00551 Formyl transferase BEN76_13025 PF01189 16S rRNA methyltransferase RsmB/F BEN76_13025 PF01029 NusB family BEN76_13030 PF02535 ZIP Zinc transporter BEN76_13040 PF00209 Sodium:neurotransmitter symporter family BEN76_13050 PF00171 Aldehyde dehydrogenase family BEN76_13055 PF10005 zinc-ribbon domain BEN76_13055 PF15887 Putative zinc-binding metallo-peptidase BEN76_13060 PF01965 DJ-1/PfpI family BEN76_13090 PF02872 5'-nucleotidase, C-terminal domain BEN76_13090 PF00149 Calcineurin-like phosphoesterase BEN76_13100 PF00579 tRNA synthetases class I (W and Y) BEN76_13105 PF03702 Anhydro-N-acetylmuramic acid kinase BEN76_13110 PF01521 Iron-sulphur cluster biosynthesis BEN76_13125 PF12848 ABC transporter BEN76_13125 PF00005 ABC transporter BEN76_13130 PF00986 DNA gyrase B subunit, carboxyl terminus BEN76_13130 PF18053 DNA gyrase B subunit insert domain BEN76_13130 PF00204 DNA gyrase B BEN76_13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_13130 PF01751 Toprim domain BEN76_13135 PF02463 RecF/RecN/SMC N terminal domain BEN76_13140 PF00712 DNA polymerase III beta subunit, N-terminal domain BEN76_13140 PF02767 DNA polymerase III beta subunit, central domain BEN76_13140 PF02768 DNA polymerase III beta subunit, C-terminal domain BEN76_13145 PF08299 Bacterial dnaA protein helix-turn-helix BEN76_13145 PF00308 Bacterial dnaA protein BEN76_13145 PF11638 DnaA N-terminal domain BEN76_13150 PF00468 Ribosomal protein L34 BEN76_13155 PF00825 Ribonuclease P BEN76_13160 PF01809 Putative membrane protein insertion efficiency factor BEN76_13165 PF14849 YidC periplasmic domain BEN76_13165 PF02096 60Kd inner membrane protein BEN76_13170 PF12631 MnmE helical domain BEN76_13170 PF01926 50S ribosome-binding GTPase BEN76_13170 PF10396 GTP-binding protein TrmE N-terminus BEN76_13175 PF13533 Biotin-lipoyl like BEN76_13180 PF07690 Major Facilitator Superfamily BEN76_13205 PF10411 Disulfide bond isomerase protein N-terminus BEN76_13205 PF13098 Thioredoxin-like domain BEN76_13215 PF00156 Phosphoribosyl transferase domain BEN76_13220 PF01979 Amidohydrolase family BEN76_13230 PF03741 Integral membrane protein TerC family BEN76_13235 PF01569 PAP2 superfamily BEN76_13240 PF08245 Mur ligase middle domain BEN76_13240 PF02875 Mur ligase family, glutamate ligase domain BEN76_13240 PF01225 Mur ligase family, catalytic domain BEN76_13255 PF00731 AIR carboxylase BEN76_13260 PF02222 ATP-grasp domain BEN76_13260 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BEN76_13265 PF13406 Transglycosylase SLT domain BEN76_13280 PF00012 Hsp70 protein BEN76_13285 PF01025 GrpE BEN76_13290 PF03466 LysR substrate binding domain BEN76_13290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_13310 PF07859 alpha/beta hydrolase fold BEN76_13315 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BEN76_13355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN76_13360 PF01252 Signal peptidase (SPase) II BEN76_13365 PF06827 Zinc finger found in FPG and IleRS BEN76_13365 PF08264 Anticodon-binding domain of tRNA BEN76_13365 PF00133 tRNA synthetases class I (I, L, M and V) BEN76_13370 PF01687 Riboflavin kinase BEN76_13370 PF06574 FAD synthetase BEN76_13375 PF12697 Alpha/beta hydrolase family BEN76_13380 PF08362 YcdC-like protein, C-terminal region BEN76_13380 PF00440 Bacterial regulatory proteins, tetR family BEN76_13385 PF00296 Luciferase-like monooxygenase BEN76_13390 PF00857 Isochorismatase family BEN76_13395 PF01042 Endoribonuclease L-PSP BEN76_13400 PF01613 Flavin reductase like domain BEN76_13405 PF00860 Permease family BEN76_13410 PF00005 ABC transporter BEN76_13415 PF00528 Binding-protein-dependent transport system inner membrane component BEN76_13420 PF00296 Luciferase-like monooxygenase BEN76_13425 PF09084 NMT1/THI5 like BEN76_13430 PF09084 NMT1/THI5 like BEN76_13435 PF00696 Amino acid kinase family BEN76_13435 PF00583 Acetyltransferase (GNAT) family BEN76_13450 PF00106 short chain dehydrogenase BEN76_13455 PF13419 Haloacid dehalogenase-like hydrolase BEN76_13465 PF01323 DSBA-like thioredoxin domain BEN76_13470 PF08360 QacR-like protein, C-terminal region BEN76_13470 PF00440 Bacterial regulatory proteins, tetR family BEN76_13475 PF00440 Bacterial regulatory proteins, tetR family BEN76_13480 PF00175 Oxidoreductase NAD-binding domain BEN76_13480 PF00042 Globin BEN76_13480 PF00970 Oxidoreductase FAD-binding domain BEN76_13485 PF00487 Fatty acid desaturase BEN76_13490 PF01138 3' exoribonuclease family, domain 1 BEN76_13490 PF03725 3' exoribonuclease family, domain 2 BEN76_13500 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BEN76_13500 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BEN76_13505 PF01510 N-acetylmuramoyl-L-alanine amidase BEN76_13510 PF03023 Lipid II flippase MurJ BEN76_13515 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BEN76_13515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN76_13520 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BEN76_13520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN76_13525 PF02706 Chain length determinant protein BEN76_13525 PF13807 G-rich domain on putative tyrosine kinase BEN76_13525 PF13614 AAA domain BEN76_13530 PF01451 Low molecular weight phosphotyrosine protein phosphatase BEN76_13535 PF02563 Polysaccharide biosynthesis/export protein BEN76_13535 PF10531 SLBB domain BEN76_13540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEN76_13540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN76_13540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN76_13560 PF16363 GDP-mannose 4,6 dehydratase BEN76_13565 PF04321 RmlD substrate binding domain BEN76_13570 PF00483 Nucleotidyl transferase BEN76_13575 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BEN76_13590 PF00535 Glycosyl transferase family 2 BEN76_13600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN76_13600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN76_13600 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEN76_13605 PF01370 NAD dependent epimerase/dehydratase family BEN76_13615 PF00534 Glycosyl transferases group 1 BEN76_13615 PF13439 Glycosyltransferase Family 4 BEN76_13620 PF13439 Glycosyltransferase Family 4 BEN76_13620 PF00534 Glycosyl transferases group 1 BEN76_13625 PF00534 Glycosyl transferases group 1 BEN76_13625 PF13477 Glycosyl transferase 4-like BEN76_13630 PF02397 Bacterial sugar transferase BEN76_13635 PF00132 Bacterial transferase hexapeptide (six repeats) BEN76_13635 PF14602 Hexapeptide repeat of succinyl-transferase BEN76_13635 PF17836 PglD N-terminal domain BEN76_13640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BEN76_13645 PF02719 Polysaccharide biosynthesis protein BEN76_13650 PF02397 Bacterial sugar transferase BEN76_13655 PF00483 Nucleotidyl transferase BEN76_13660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BEN76_13660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BEN76_13660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BEN76_13665 PF00342 Phosphoglucose isomerase BEN76_13670 PF16363 GDP-mannose 4,6 dehydratase BEN76_13675 PF11846 Virulence factor membrane-bound polymerase, C-terminal BEN76_13675 PF04932 O-Antigen ligase BEN76_13675 PF15864 Protein glycosylation ligase BEN76_13680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BEN76_13680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BEN76_13680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BEN76_13680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BEN76_13685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_13685 PF03466 LysR substrate binding domain BEN76_13690 PF02652 L-lactate permease BEN76_13695 PF00392 Bacterial regulatory proteins, gntR family BEN76_13695 PF07729 FCD domain BEN76_13700 PF01070 FMN-dependent dehydrogenase BEN76_13705 PF01565 FAD binding domain BEN76_13705 PF09330 D-lactate dehydrogenase, membrane binding BEN76_13710 PF14052 Capsule assembly protein Wzi BEN76_13720 PF00155 Aminotransferase class I and II BEN76_13725 PF00324 Amino acid permease BEN76_13735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BEN76_13740 PF01037 Lrp/AsnC ligand binding domain BEN76_13745 PF01266 FAD dependent oxidoreductase BEN76_13750 PF00842 Alanine racemase, C-terminal domain BEN76_13750 PF01168 Alanine racemase, N-terminal domain BEN76_13755 PF01042 Endoribonuclease L-PSP BEN76_13760 PF00324 Amino acid permease BEN76_13790 PF01722 BolA-like protein BEN76_13800 PF13614 AAA domain BEN76_13815 PF09335 SNARE associated Golgi protein BEN76_13820 PF07681 DoxX BEN76_13825 PF04076 Bacterial OB fold (BOF) protein BEN76_13830 PF00117 Glutamine amidotransferase class-I BEN76_13830 PF00958 GMP synthase C terminal domain BEN76_13830 PF02540 NAD synthase BEN76_13845 PF02678 Pirin BEN76_13845 PF05726 Pirin C-terminal cupin domain BEN76_13860 PF00892 EamA-like transporter family BEN76_13870 PF00750 tRNA synthetases class I (R) BEN76_13870 PF05746 DALR anticodon binding domain BEN76_13870 PF03485 Arginyl tRNA synthetase N terminal domain BEN76_13875 PF03949 Malic enzyme, NAD binding domain BEN76_13875 PF00390 Malic enzyme, N-terminal domain BEN76_13885 PF00182 Chitinase class I BEN76_13905 PF04261 Dyp-type peroxidase family BEN76_13910 PF01810 LysE type translocator BEN76_13915 PF00950 ABC 3 transport family BEN76_13920 PF00005 ABC transporter BEN76_13940 PF00119 ATP synthase A chain BEN76_13945 PF00137 ATP synthase subunit C BEN76_13950 PF00430 ATP synthase B/B' CF(0) BEN76_13955 PF00213 ATP synthase delta (OSCP) subunit BEN76_13960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN76_13960 PF00306 ATP synthase alpha/beta chain, C terminal domain BEN76_13960 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEN76_13965 PF00231 ATP synthase BEN76_13970 PF02874 ATP synthase alpha/beta family, beta-barrel domain BEN76_13970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BEN76_13975 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BEN76_13980 PF01263 Aldose 1-epimerase BEN76_13990 PF00255 Glutathione peroxidase BEN76_14000 PF07690 Major Facilitator Superfamily BEN76_14005 PF00440 Bacterial regulatory proteins, tetR family BEN76_14010 PF00892 EamA-like transporter family BEN76_14015 PF03466 LysR substrate binding domain BEN76_14015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_14025 PF01300 Telomere recombination BEN76_14030 PF17782 DprA winged helix domain BEN76_14030 PF02481 DNA recombination-mediator protein A BEN76_14035 PF01476 LysM domain BEN76_14040 PF01327 Polypeptide deformylase BEN76_14065 PF00440 Bacterial regulatory proteins, tetR family BEN76_14095 PF03009 Glycerophosphoryl diester phosphodiesterase family BEN76_14105 PF08497 Radical SAM N-terminal BEN76_14105 PF04055 Radical SAM superfamily BEN76_14105 PF11842 Domain of unknown function (DUF3362) BEN76_14120 PF00083 Sugar (and other) transporter BEN76_14120 PF07690 Major Facilitator Superfamily BEN76_14125 PF11798 IMS family HHH motif BEN76_14125 PF00817 impB/mucB/samB family BEN76_14125 PF11799 impB/mucB/samB family C-terminal domain BEN76_14135 PF07690 Major Facilitator Superfamily BEN76_14140 PF03641 Possible lysine decarboxylase BEN76_14145 PF03741 Integral membrane protein TerC family BEN76_14145 PF03471 Transporter associated domain BEN76_14150 PF02810 SEC-C motif BEN76_14155 PF03458 UPF0126 domain BEN76_14160 PF07690 Major Facilitator Superfamily BEN76_14165 PF00521 DNA gyrase/topoisomerase IV, subunit A BEN76_14165 PF03989 DNA gyrase C-terminal domain, beta-propeller BEN76_14170 PF00501 AMP-binding enzyme BEN76_14170 PF13193 AMP-binding enzyme C-terminal domain BEN76_14185 PF00719 Inorganic pyrophosphatase BEN76_14210 PF00665 Integrase core domain BEN76_14250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_14250 PF00672 HAMP domain BEN76_14250 PF00512 His Kinase A (phospho-acceptor) domain BEN76_14255 PF00486 Transcriptional regulatory protein, C terminal BEN76_14255 PF00072 Response regulator receiver domain BEN76_14265 PF07731 Multicopper oxidase BEN76_14265 PF07732 Multicopper oxidase BEN76_14265 PF00394 Multicopper oxidase BEN76_14285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BEN76_14290 PF00873 AcrB/AcrD/AcrF family BEN76_14300 PF02421 Ferrous iron transport protein B BEN76_14300 PF07664 Ferrous iron transport protein B C terminus BEN76_14300 PF07670 Nucleoside recognition BEN76_14315 PF13411 MerR HTH family regulatory protein BEN76_14335 PF14461 Prokaryotic E2 family B BEN76_14335 PF00899 ThiF family BEN76_14350 PF00149 Calcineurin-like phosphoesterase BEN76_14380 PF00543 Nitrogen regulatory protein P-II BEN76_14385 PF00909 Ammonium Transporter Family BEN76_14395 PF13333 Integrase core domain BEN76_14395 PF13276 HTH-like domain BEN76_14395 PF00665 Integrase core domain BEN76_14400 PF03477 ATP cone domain BEN76_14405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BEN76_14405 PF01872 RibD C-terminal domain BEN76_14415 PF00677 Lumazine binding domain BEN76_14430 PF02789 Cytosol aminopeptidase family, N-terminal domain BEN76_14430 PF00883 Cytosol aminopeptidase family, catalytic domain BEN76_14440 PF03739 Lipopolysaccharide export system permease LptF/LptG BEN76_14445 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BEN76_14445 PF01676 Metalloenzyme superfamily BEN76_14450 PF00595 PDZ domain BEN76_14450 PF03572 Peptidase family S41 BEN76_14455 PF00072 Response regulator receiver domain BEN76_14455 PF00158 Sigma-54 interaction domain BEN76_14455 PF02954 Bacterial regulatory protein, Fis family BEN76_14460 PF13188 PAS domain BEN76_14460 PF13426 PAS domain BEN76_14460 PF00512 His Kinase A (phospho-acceptor) domain BEN76_14460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_14460 PF00989 PAS fold BEN76_14465 PF00196 Bacterial regulatory proteins, luxR family BEN76_14465 PF00072 Response regulator receiver domain BEN76_14470 PF00768 D-alanyl-D-alanine carboxypeptidase BEN76_14475 PF00291 Pyridoxal-phosphate dependent enzyme BEN76_14480 PF01842 ACT domain BEN76_14480 PF00742 Homoserine dehydrogenase BEN76_14480 PF03447 Homoserine dehydrogenase, NAD binding domain BEN76_14485 PF10411 Disulfide bond isomerase protein N-terminus BEN76_14485 PF13098 Thioredoxin-like domain BEN76_14490 PF00589 Phage integrase family BEN76_14490 PF02899 Phage integrase, N-terminal SAM-like domain BEN76_14500 PF02421 Ferrous iron transport protein B BEN76_14500 PF07664 Ferrous iron transport protein B C terminus BEN76_14500 PF07670 Nucleoside recognition BEN76_14510 PF02875 Mur ligase family, glutamate ligase domain BEN76_14510 PF08245 Mur ligase middle domain BEN76_14515 PF01098 Cell cycle protein BEN76_14520 PF00749 tRNA synthetases class I (E and Q), catalytic domain BEN76_14525 PF01258 Prokaryotic dksA/traR C4-type zinc finger BEN76_14530 PF00149 Calcineurin-like phosphoesterase BEN76_14535 PF00293 NUDIX domain BEN76_14540 PF01964 Radical SAM ThiC family BEN76_14540 PF13667 ThiC-associated domain BEN76_14545 PF02321 Outer membrane efflux protein BEN76_14550 PF01895 PhoU domain BEN76_14555 PF04362 Bacterial Fe(2+) trafficking BEN76_14560 PF00206 Lyase BEN76_14560 PF14698 Argininosuccinate lyase C-terminal BEN76_14570 PF00072 Response regulator receiver domain BEN76_14570 PF04397 LytTr DNA-binding domain BEN76_14575 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BEN76_14575 PF03900 Porphobilinogen deaminase, C-terminal domain BEN76_14595 PF03061 Thioesterase superfamily BEN76_14600 PF00816 H-NS histone family BEN76_14615 PF00263 Bacterial type II and III secretion system protein BEN76_14615 PF03958 Bacterial type II/III secretion system short domain BEN76_14620 PF16697 Inner membrane component of T3SS, cytoplasmic domain BEN76_14625 PF13419 Haloacid dehalogenase-like hydrolase BEN76_14630 PF00425 chorismate binding enzyme BEN76_14630 PF04715 Anthranilate synthase component I, N terminal region BEN76_14655 PF03144 Elongation factor Tu domain 2 BEN76_14655 PF03143 Elongation factor Tu C-terminal domain BEN76_14655 PF00009 Elongation factor Tu GTP binding domain BEN76_14665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BEN76_14670 PF00467 KOW motif BEN76_14670 PF02357 Transcription termination factor nusG BEN76_14675 PF03946 Ribosomal protein L11, N-terminal domain BEN76_14675 PF00298 Ribosomal protein L11, RNA binding domain BEN76_14680 PF00687 Ribosomal protein L1p/L10e family BEN76_14685 PF00466 Ribosomal protein L10 BEN76_14690 PF00542 Ribosomal protein L7/L12 C-terminal domain BEN76_14690 PF16320 Ribosomal protein L7/L12 dimerisation domain BEN76_14695 PF00562 RNA polymerase Rpb2, domain 6 BEN76_14695 PF10385 RNA polymerase beta subunit external 1 domain BEN76_14695 PF04561 RNA polymerase Rpb2, domain 2 BEN76_14695 PF04560 RNA polymerase Rpb2, domain 7 BEN76_14695 PF04563 RNA polymerase beta subunit BEN76_14695 PF04565 RNA polymerase Rpb2, domain 3 BEN76_14700 PF00623 RNA polymerase Rpb1, domain 2 BEN76_14700 PF04998 RNA polymerase Rpb1, domain 5 BEN76_14700 PF04983 RNA polymerase Rpb1, domain 3 BEN76_14700 PF04997 RNA polymerase Rpb1, domain 1 BEN76_14700 PF05000 RNA polymerase Rpb1, domain 4 BEN76_14715 PF00561 alpha/beta hydrolase fold BEN76_14720 PF03553 Na+/H+ antiporter family BEN76_14720 PF13726 Na+-H+ antiporter family BEN76_14735 PF00183 Hsp90 protein BEN76_14735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_14755 PF01323 DSBA-like thioredoxin domain BEN76_14770 PF02803 Thiolase, C-terminal domain BEN76_14770 PF00108 Thiolase, N-terminal domain BEN76_14775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BEN76_14775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BEN76_14775 PF00378 Enoyl-CoA hydratase/isomerase BEN76_14790 PF01541 GIY-YIG catalytic domain BEN76_14790 PF02151 UvrB/uvrC motif BEN76_14790 PF08459 UvrC Helix-hairpin-helix N-terminal BEN76_14800 PF01066 CDP-alcohol phosphatidyltransferase BEN76_14805 PF12833 Helix-turn-helix domain BEN76_14805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BEN76_14805 PF02805 Metal binding domain of Ada BEN76_14805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BEN76_14830 PF13533 Biotin-lipoyl like BEN76_14835 PF03652 Holliday junction resolvase BEN76_14840 PF02622 Uncharacterized ACR, COG1678 BEN76_14845 PF02463 RecF/RecN/SMC N terminal domain BEN76_14855 PF06865 Pyrimidine/purine nucleoside phosphorylase BEN76_14860 PF00588 SpoU rRNA Methylase family BEN76_14860 PF08032 RNA 2'-O ribose methyltransferase substrate binding BEN76_14865 PF00892 EamA-like transporter family BEN76_14870 PF01121 Dephospho-CoA kinase BEN76_14875 PF06750 Bacterial Peptidase A24 N-terminal domain BEN76_14875 PF01478 Type IV leader peptidase family BEN76_14880 PF00482 Type II secretion system (T2SS), protein F BEN76_14885 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BEN76_14885 PF00437 Type II/IV secretion system protein BEN76_14890 PF00121 Triosephosphate isomerase BEN76_14895 PF03840 Preprotein translocase SecG subunit BEN76_14915 PF17384 RimP C-terminal SH3 domain BEN76_14915 PF02576 RimP N-terminal domain BEN76_14920 PF08529 NusA N-terminal domain BEN76_14920 PF13184 NusA-like KH domain BEN76_14920 PF00575 S1 RNA binding domain BEN76_14925 PF11987 Translation-initiation factor 2 BEN76_14925 PF00009 Elongation factor Tu GTP binding domain BEN76_14925 PF08364 Bacterial translation initiation factor IF-2 associated region BEN76_14925 PF04760 Translation initiation factor IF-2, N-terminal region BEN76_14930 PF02033 Ribosome-binding factor A BEN76_14940 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BEN76_14950 PF00361 Proton-conducting membrane transporter BEN76_14955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BEN76_14960 PF00361 Proton-conducting membrane transporter BEN76_14960 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BEN76_14960 PF13244 Domain of unknown function (DUF4040) BEN76_14960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BEN76_14975 PF01502 Phosphoribosyl-AMP cyclohydrolase BEN76_14980 PF03109 ABC1 family BEN76_14990 PF01209 ubiE/COQ5 methyltransferase family BEN76_15005 PF13953 PapC C-terminal domain BEN76_15005 PF13954 PapC N-terminal domain BEN76_15005 PF00577 Outer membrane usher protein BEN76_15010 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BEN76_15010 PF02753 Pili assembly chaperone PapD, C-terminal domain BEN76_15025 PF03976 Polyphosphate kinase 2 (PPK2) BEN76_15030 PF07690 Major Facilitator Superfamily BEN76_15040 PF17946 RecC C-terminal domain BEN76_15045 PF13361 UvrD-like helicase C-terminal domain BEN76_15045 PF00580 UvrD/REP helicase N-terminal domain BEN76_15045 PF12705 PD-(D/E)XK nuclease superfamily BEN76_15050 PF13538 UvrD-like helicase C-terminal domain BEN76_15065 PF00312 Ribosomal protein S15 BEN76_15070 PF00575 S1 RNA binding domain BEN76_15070 PF01138 3' exoribonuclease family, domain 1 BEN76_15070 PF03725 3' exoribonuclease family, domain 2 BEN76_15070 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BEN76_15070 PF00013 KH domain BEN76_15075 PF00593 TonB dependent receptor BEN76_15075 PF07715 TonB-dependent Receptor Plug Domain BEN76_15080 PF07660 Secretin and TonB N terminus short domain BEN76_15080 PF00593 TonB dependent receptor BEN76_15080 PF07715 TonB-dependent Receptor Plug Domain BEN76_15085 PF01544 CorA-like Mg2+ transporter protein BEN76_15090 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BEN76_15100 PF00226 DnaJ domain BEN76_15100 PF01556 DnaJ C terminal domain BEN76_15105 PF01430 Hsp33 protein BEN76_15110 PF02254 TrkA-N domain BEN76_15110 PF00999 Sodium/hydrogen exchanger family BEN76_15115 PF00271 Helicase conserved C-terminal domain BEN76_15115 PF18074 Primosomal protein N C-terminal domain BEN76_15115 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BEN76_15115 PF17764 3′ DNA-binding domain (3′BD) BEN76_15115 PF00270 DEAD/DEAH box helicase BEN76_15120 PF00482 Type II secretion system (T2SS), protein F BEN76_15125 PF08334 Type II secretion system (T2SS), protein G BEN76_15125 PF07963 Prokaryotic N-terminal methylation motif BEN76_15135 PF00795 Carbon-nitrogen hydrolase BEN76_15140 PF00571 CBS domain BEN76_15140 PF03471 Transporter associated domain BEN76_15145 PF01206 Sulfurtransferase TusA BEN76_15150 PF01488 Shikimate / quinate 5-dehydrogenase BEN76_15150 PF08501 Shikimate dehydrogenase substrate binding domain BEN76_15150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BEN76_15155 PF03884 DNA gyrase inhibitor YacG BEN76_15165 PF13247 4Fe-4S dicluster domain BEN76_15165 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BEN76_15165 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_15175 PF13404 AsnC-type helix-turn-helix domain BEN76_15175 PF01037 Lrp/AsnC ligand binding domain BEN76_15180 PF01053 Cys/Met metabolism PLP-dependent enzyme BEN76_15190 PF01197 Ribosomal protein L31 BEN76_15195 PF03109 ABC1 family BEN76_15200 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_15200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEN76_15200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_15205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_15205 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BEN76_15205 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_15210 PF01554 MatE BEN76_15220 PF06969 HemN C-terminal domain BEN76_15220 PF04055 Radical SAM superfamily BEN76_15225 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEN76_15225 PF00578 AhpC/TSA family BEN76_15240 PF13193 AMP-binding enzyme C-terminal domain BEN76_15240 PF00501 AMP-binding enzyme BEN76_15245 PF00575 S1 RNA binding domain BEN76_15245 PF10150 Ribonuclease E/G family BEN76_15245 PF12111 Polyribonucleotide phosphorylase C terminal BEN76_15255 PF01479 S4 domain BEN76_15255 PF00849 RNA pseudouridylate synthase BEN76_15260 PF13419 Haloacid dehalogenase-like hydrolase BEN76_15270 PF02798 Glutathione S-transferase, N-terminal domain BEN76_15280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_15280 PF03466 LysR substrate binding domain BEN76_15285 PF12706 Beta-lactamase superfamily domain BEN76_15290 PF00141 Peroxidase BEN76_15295 PF05524 PEP-utilising enzyme, N-terminal BEN76_15295 PF00391 PEP-utilising enzyme, mobile domain BEN76_15295 PF02896 PEP-utilising enzyme, TIM barrel domain BEN76_15295 PF01590 GAF domain BEN76_15300 PF00293 NUDIX domain BEN76_15310 PF12867 DinB superfamily BEN76_15310 PF03781 Sulfatase-modifying factor enzyme 1 BEN76_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BEN76_15315 PF03466 LysR substrate binding domain BEN76_15325 PF00330 Aconitase family (aconitate hydratase) BEN76_15330 PF00694 Aconitase C-terminal domain BEN76_15340 PF00180 Isocitrate/isopropylmalate dehydrogenase BEN76_15350 PF01176 Translation initiation factor 1A / IF-1 BEN76_15360 PF01416 tRNA pseudouridine synthase BEN76_15375 PF01118 Semialdehyde dehydrogenase, NAD binding domain BEN76_15375 PF02774 Semialdehyde dehydrogenase, dimerisation domain BEN76_15385 PF00375 Sodium:dicarboxylate symporter family BEN76_15390 PF13439 Glycosyltransferase Family 4 BEN76_15390 PF00534 Glycosyl transferases group 1 BEN76_15395 PF03279 Bacterial lipid A biosynthesis acyltransferase BEN76_15420 PF01396 Topoisomerase DNA binding C4 zinc finger BEN76_15420 PF01131 DNA topoisomerase BEN76_15420 PF08272 Topoisomerase I zinc-ribbon-like BEN76_15420 PF01751 Toprim domain BEN76_15425 PF13361 UvrD-like helicase C-terminal domain BEN76_15425 PF00580 UvrD/REP helicase N-terminal domain BEN76_15430 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BEN76_15450 PF02254 TrkA-N domain BEN76_15450 PF00999 Sodium/hydrogen exchanger family BEN76_15455 PF00471 Ribosomal protein L33 BEN76_15460 PF00830 Ribosomal L28 family BEN76_15465 PF00171 Aldehyde dehydrogenase family BEN76_15470 PF08360 QacR-like protein, C-terminal region BEN76_15470 PF00440 Bacterial regulatory proteins, tetR family BEN76_15475 PF01842 ACT domain BEN76_15475 PF00551 Formyl transferase BEN76_15485 PF01618 MotA/TolQ/ExbB proton channel family BEN76_15495 PF01625 Peptide methionine sulfoxide reductase BEN76_15510 PF00186 Dihydrofolate reductase BEN76_15515 PF00303 Thymidylate synthase BEN76_15530 PF01790 Prolipoprotein diacylglyceryl transferase BEN76_15550 PF00902 Sec-independent protein translocase protein (TatC) BEN76_15555 PF02416 mttA/Hcf106 family BEN76_15560 PF02416 mttA/Hcf106 family BEN76_15570 PF01725 Ham1 family BEN76_15580 PF07021 Methionine biosynthesis protein MetW BEN76_15580 PF00561 alpha/beta hydrolase fold BEN76_15585 PF00561 alpha/beta hydrolase fold BEN76_15590 PF00682 HMGL-like BEN76_15590 PF08502 LeuA allosteric (dimerisation) domain BEN76_15595 PF13640 2OG-Fe(II) oxygenase superfamily BEN76_15595 PF18331 PKHD-type hydroxylase C-terminal domain BEN76_15600 PF07715 TonB-dependent Receptor Plug Domain BEN76_15600 PF00593 TonB dependent receptor BEN76_15605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BEN76_15605 PF05698 Bacterial trigger factor protein (TF) C-terminus BEN76_15605 PF05697 Bacterial trigger factor protein (TF) BEN76_15610 PF00574 Clp protease BEN76_15615 PF06689 ClpX C4-type zinc finger BEN76_15615 PF07724 AAA domain (Cdc48 subfamily) BEN76_15615 PF10431 C-terminal, D2-small domain, of ClpB protein BEN76_15625 PF05683 Fumarase C-terminus BEN76_15625 PF05681 Fumarate hydratase (Fumerase) BEN76_15635 PF01515 Phosphate acetyl/butaryl transferase BEN76_15635 PF07085 DRTGG domain BEN76_15640 PF00871 Acetokinase family BEN76_15645 PF00920 Dehydratase family BEN76_15650 PF01081 KDPG and KHG aldolase BEN76_15655 PF02447 GntP family permease BEN76_15660 PF01202 Shikimate kinase BEN76_15665 PF00171 Aldehyde dehydrogenase family BEN76_15670 PF00171 Aldehyde dehydrogenase family BEN76_15685 PF00933 Glycosyl hydrolase family 3 N terminal domain BEN76_15690 PF17804 Tail specific protease N-terminal domain BEN76_15690 PF00595 PDZ domain BEN76_15690 PF03572 Peptidase family S41 BEN76_15690 PF11818 C-terminal domain of tail specific protease (DUF3340) BEN76_15695 PF00534 Glycosyl transferases group 1 BEN76_15695 PF13439 Glycosyltransferase Family 4 BEN76_15700 PF01569 PAP2 superfamily BEN76_15705 PF04384 Iron-sulphur cluster assembly BEN76_15710 PF00334 Nucleoside diphosphate kinase BEN76_15715 PF04055 Radical SAM superfamily BEN76_15720 PF18073 Rubredoxin metal binding domain BEN76_15725 PF13464 Domain of unknown function (DUF4115) BEN76_15730 PF04551 GcpE protein BEN76_15735 PF03129 Anticodon binding domain BEN76_15735 PF13393 Histidyl-tRNA synthetase BEN76_15745 PF13360 PQQ-like domain BEN76_15750 PF01926 50S ribosome-binding GTPase BEN76_15750 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BEN76_15765 PF00550 Phosphopantetheine attachment site BEN76_15775 PF07977 FabA-like domain BEN76_15790 PF00221 Aromatic amino acid lyase BEN76_15810 PF04820 Tryptophan halogenase BEN76_15820 PF00109 Beta-ketoacyl synthase, N-terminal domain BEN76_15820 PF02801 Beta-ketoacyl synthase, C-terminal domain BEN76_15845 PF02355 Protein export membrane protein BEN76_15845 PF07549 SecD/SecF GG Motif BEN76_15850 PF02355 Protein export membrane protein BEN76_15850 PF13721 SecD export protein N-terminal TM region BEN76_15850 PF07549 SecD/SecF GG Motif BEN76_15855 PF02699 Preprotein translocase subunit BEN76_15860 PF01702 Queuine tRNA-ribosyltransferase BEN76_15865 PF02547 Queuosine biosynthesis protein BEN76_15875 PF00083 Sugar (and other) transporter BEN76_15875 PF07690 Major Facilitator Superfamily BEN76_15880 PF00171 Aldehyde dehydrogenase family BEN76_15890 PF00512 His Kinase A (phospho-acceptor) domain BEN76_15890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_15890 PF13426 PAS domain BEN76_15890 PF00672 HAMP domain BEN76_15895 PF08335 GlnD PII-uridylyltransferase BEN76_15895 PF03710 Glutamate-ammonia ligase adenylyltransferase BEN76_15900 PF01063 Amino-transferase class IV BEN76_15915 PF01522 Polysaccharide deacetylase BEN76_15920 PF00535 Glycosyl transferase family 2 BEN76_15925 PF00534 Glycosyl transferases group 1 BEN76_15925 PF13439 Glycosyltransferase Family 4 BEN76_15960 PF17101 Stealth protein CR1, conserved region 1 BEN76_15960 PF17102 Stealth protein CR3, conserved region 3 BEN76_15960 PF11380 Stealth protein CR2, conserved region 2 BEN76_15965 PF02938 GAD domain BEN76_15965 PF00152 tRNA synthetases class II (D, K and N) BEN76_15965 PF01336 OB-fold nucleic acid binding domain BEN76_15975 PF07715 TonB-dependent Receptor Plug Domain BEN76_15975 PF00593 TonB dependent receptor BEN76_15980 PF07715 TonB-dependent Receptor Plug Domain BEN76_15980 PF00593 TonB dependent receptor BEN76_16010 PF06146 Phosphate-starvation-inducible E BEN76_16015 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN76_16015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_16015 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_16015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_16020 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_16020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_16020 PF12806 Acetyl-CoA dehydrogenase C-terminal like BEN76_16020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_16030 PF00672 HAMP domain BEN76_16030 PF00512 His Kinase A (phospho-acceptor) domain BEN76_16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BEN76_16035 PF00072 Response regulator receiver domain BEN76_16035 PF00486 Transcriptional regulatory protein, C terminal BEN76_16040 PF04237 YjbR BEN76_16055 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BEN76_16075 PF01923 Cobalamin adenosyltransferase BEN76_16080 PF07715 TonB-dependent Receptor Plug Domain BEN76_16080 PF00593 TonB dependent receptor BEN76_16085 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BEN76_16090 PF00291 Pyridoxal-phosphate dependent enzyme BEN76_16110 PF12833 Helix-turn-helix domain BEN76_16110 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BEN76_16115 PF00290 Tryptophan synthase alpha chain BEN76_16120 PF01039 Carboxyl transferase domain BEN76_16125 PF02875 Mur ligase family, glutamate ligase domain BEN76_16125 PF08245 Mur ligase middle domain BEN76_16135 PF00375 Sodium:dicarboxylate symporter family BEN76_16140 PF00753 Metallo-beta-lactamase superfamily BEN76_16145 PF10417 C-terminal domain of 1-Cys peroxiredoxin BEN76_16145 PF00578 AhpC/TSA family BEN76_16150 PF07516 SecA Wing and Scaffold domain BEN76_16150 PF01043 SecA preprotein cross-linking domain BEN76_16150 PF07517 SecA DEAD-like domain BEN76_16150 PF02810 SEC-C motif BEN76_16160 PF01960 ArgJ family BEN76_16165 PF02445 Quinolinate synthetase A protein BEN76_16190 PF13488 Glycine zipper BEN76_16190 PF00691 OmpA family BEN76_16195 PF17152 Periplasmic sensor domain BEN76_16195 PF00990 Diguanylate cyclase, GGDEF domain BEN76_16200 PF13689 YfiR/HmsC-like BEN76_16285 PF13091 PLD-like domain BEN76_16285 PF13087 AAA domain BEN76_16290 PF13195 Protein of unknown function (DUF4011) BEN76_16290 PF13087 AAA domain BEN76_16290 PF13086 AAA domain BEN76_16290 PF13195 Protein of unknown function (DUF4011) BEN76_16290 PF13087 AAA domain BEN76_16290 PF13086 AAA domain BEN76_16295 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system BEN76_16320 PF13391 HNH endonuclease BEN76_16330 PF02601 Exonuclease VII, large subunit BEN76_16330 PF13742 OB-fold nucleic acid binding domain BEN76_16360 PF00589 Phage integrase family BEN76_16360 PF13356 Arm DNA-binding domain BEN76_16405 PF07715 TonB-dependent Receptor Plug Domain BEN76_16405 PF00593 TonB dependent receptor BEN76_16410 PF03328 HpcH/HpaI aldolase/citrate lyase family BEN76_16415 PF00106 short chain dehydrogenase BEN76_16420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_16420 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_16420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_16430 PF00378 Enoyl-CoA hydratase/isomerase BEN76_16435 PF02803 Thiolase, C-terminal domain BEN76_16435 PF00108 Thiolase, N-terminal domain BEN76_16440 PF03060 Nitronate monooxygenase BEN76_16445 PF00378 Enoyl-CoA hydratase/isomerase BEN76_16450 PF00501 AMP-binding enzyme BEN76_16450 PF13193 AMP-binding enzyme C-terminal domain BEN76_16455 PF00108 Thiolase, N-terminal domain BEN76_16455 PF02803 Thiolase, C-terminal domain BEN76_16460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BEN76_16460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BEN76_16460 PF02770 Acyl-CoA dehydrogenase, middle domain BEN76_16465 PF00501 AMP-binding enzyme BEN76_16465 PF13193 AMP-binding enzyme C-terminal domain BEN76_16475 PF00067 Cytochrome P450 BEN76_16480 PF12833 Helix-turn-helix domain BEN76_16485 PF00171 Aldehyde dehydrogenase family BEN76_16490 PF00107 Zinc-binding dehydrogenase BEN76_16490 PF08240 Alcohol dehydrogenase GroES-like domain BEN76_16495 PF00111 2Fe-2S iron-sulfur cluster binding domain BEN76_16500 PF14759 Reductase C-terminal BEN76_16500 PF07992 Pyridine nucleotide-disulphide oxidoreductase BEN76_16535 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BEN76_16540 PF04996 Succinylarginine dihydrolase BEN76_16545 PF00171 Aldehyde dehydrogenase family BEN76_16550 PF04958 Arginine N-succinyltransferase beta subunit BEN76_16555 PF00202 Aminotransferase class-III BEN76_16560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEN76_16560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BEN76_16565 PF00324 Amino acid permease BEN76_16570 PF00850 Histone deacetylase domain BEN76_16575 PF13404 AsnC-type helix-turn-helix domain BEN76_16575 PF01037 Lrp/AsnC ligand binding domain BEN76_16630 PF17762 HTH domain found in ParB protein BEN76_16630 PF02195 ParB-like nuclease domain BEN76_16680 PF13614 AAA domain BEN76_16715 PF01555 DNA methylase BEN76_16740 PF01051 Initiator Replication protein BEN76_16750 PF00145 C-5 cytosine-specific DNA methylase BEN76_16760 PF13471 Transglutaminase-like superfamily BEN76_16770 PF00664 ABC transporter transmembrane region BEN76_16770 PF00005 ABC transporter BEN76_16905 PF01134 Glucose inhibited division protein A BEN76_17015 PF01810 LysE type translocator BEN76_17020 PF00440 Bacterial regulatory proteins, tetR family BEN76_17060 PF02899 Phage integrase, N-terminal SAM-like domain BEN76_17060 PF00589 Phage integrase family BEN76_17095 PF03389 MobA/MobL family BEN76_17105 PF13520 Amino acid permease BEN76_17110 PF02574 Homocysteine S-methyltransferase BEN76_17135 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BEN76_17145 PF01965 DJ-1/PfpI family BEN76_17150 PF05973 Phage derived protein Gp49-like (DUF891) BEN76_17170 PF01051 Initiator Replication protein BEN76_17185 PF03389 MobA/MobL family BEN76_17200 PF00857 Isochorismatase family BEN76_17210 PF03432 Relaxase/Mobilisation nuclease domain BEN76_17240 PF03389 MobA/MobL family