C3F34_00030 SM00382 ATPases associated with a variety of cellular activities C3F34_00060 SM00796 Allophanate hydrolase subunit 1 C3F34_00060 SM00797 Allophanate hydrolase subunit 2 C3F34_00060 SM00878 Biotin carboxylase C-terminal domain C3F34_00075 SM00267 diguanylate cyclase C3F34_00085 SM00028 Tetratricopeptide repeats C3F34_00090 SM01228 C3F34_00090 C3F34_00105 SM01126 C3F34_00105 C3F34_00125 SM00798 AICARFT/IMPCHase bienzyme C3F34_00125 SM00851 MGS-like domain C3F34_00130 SM01209 C3F34_00130 C3F34_00130 SM01210 C3F34_00130 C3F34_00135 SM00342 helix_turn_helix, arabinose operon control protein C3F34_00150 SM00382 ATPases associated with a variety of cellular activities C3F34_00150 SM00930 C3F34_00150 C3F34_00165 SM00481 DNA polymerase alpha chain like domain C3F34_00195 SM00421 helix_turn_helix, Lux Regulon C3F34_00350 SM00563 Phosphate acyltransferases C3F34_00360 SM00344 helix_turn_helix ASNC type C3F34_00395 SM00382 ATPases associated with a variety of cellular activities C3F34_00395 SM00930 C3F34_00395 C3F34_00420 SM00419 helix_turn_helix, cAMP Regulatory protein C3F34_00445 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C3F34_00465 SM00342 helix_turn_helix, arabinose operon control protein C3F34_00485 SM00849 Metallo-beta-lactamase superfamily C3F34_00495 SM01118 C3F34_00495 C3F34_00500 SM00880 C3F34_00500 C3F34_00500 SM01118 C3F34_00500 C3F34_00535 SM00903 Flavin reductase like domain C3F34_00600 SM00530 Helix-turn-helix XRE-family like proteins C3F34_00610 SM00487 DEAD-like helicases superfamily C3F34_00610 SM00490 helicase superfamily c-terminal domain C3F34_00625 SM00255 Toll - interleukin 1 - resistance C3F34_00645 SM00095 Transthyretin C3F34_00650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C3F34_00700 SM00830 Chorismate mutase type II C3F34_00755 SM00387 Histidine kinase-like ATPases C3F34_00755 SM00388 His Kinase A (phosphoacceptor) domain C3F34_00760 SM00448 cheY-homologous receiver domain C3F34_00760 SM00862 Transcriptional regulatory protein, C terminal C3F34_00780 SM00382 ATPases associated with a variety of cellular activities C3F34_00790 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C3F34_00790 SM00267 diguanylate cyclase C3F34_00830 SM00422 helix_turn_helix, mercury resistance C3F34_00875 SM00382 ATPases associated with a variety of cellular activities C3F34_00875 SM00487 DEAD-like helicases superfamily C3F34_00875 SM00490 helicase superfamily c-terminal domain C3F34_00875 SM00847 Helicase associated domain (HA2) Add an annotation C3F34_00920 SM00487 DEAD-like helicases superfamily C3F34_00920 SM00490 helicase superfamily c-terminal domain C3F34_00960 SM00479 C3F34_00960 C3F34_01015 SM01130 C3F34_01015 C3F34_01055 SM00382 ATPases associated with a variety of cellular activities C3F34_01110 SM00382 ATPases associated with a variety of cellular activities C3F34_01150 SM01126 C3F34_01150 C3F34_01175 SM00342 helix_turn_helix, arabinose operon control protein C3F34_01225 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_01260 SM00882 Coenzyme A transferase C3F34_01265 SM00882 Coenzyme A transferase C3F34_01285 SM01211 C3F34_01285 C3F34_01290 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C3F34_01295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C3F34_01300 SM00382 ATPases associated with a variety of cellular activities C3F34_01475 SM00507 HNH nucleases C3F34_01525 SM00990 C3F34_01525 C3F34_01555 SM01126 C3F34_01555 C3F34_01760 SM00849 Metallo-beta-lactamase superfamily C3F34_01765 SM00382 ATPases associated with a variety of cellular activities C3F34_01820 SM01126 C3F34_01820 C3F34_01835 SM00434 DNA Topoisomerase IV C3F34_01840 SM00893 Electron transfer flavoprotein domain C3F34_01845 SM00893 Electron transfer flavoprotein domain C3F34_01855 SM00344 helix_turn_helix ASNC type C3F34_01905 SM00382 ATPases associated with a variety of cellular activities C3F34_01910 SM00978 C3F34_01910 C3F34_01955 SM01230 C3F34_01955 C3F34_02005 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_02005 SM00895 C3F34_02005 C3F34_02010 SM00746 metallochaperone-like domain C3F34_02015 SM00422 helix_turn_helix, mercury resistance C3F34_02025 SM00382 ATPases associated with a variety of cellular activities C3F34_02025 SM00464 Found in ATP-dependent protease La (LON) C3F34_02055 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3F34_02200 SM00244 prohibitin homologues C3F34_02225 SM00421 helix_turn_helix, Lux Regulon C3F34_02230 SM00881 CoA binding domain C3F34_02250 SM00861 Transketolase, pyrimidine binding domain C3F34_02355 SM00400 zinc finger C3F34_02355 SM00493 C3F34_02355 C3F34_02365 SM00028 Tetratricopeptide repeats C3F34_02400 SM01400 C3F34_02400 C3F34_02435 SM00450 Rhodanese Homology Domain C3F34_02575 SM00014 Acid phosphatase homologues C3F34_02610 SM00822 C3F34_02610 C3F34_02675 SM00382 ATPases associated with a variety of cellular activities C3F34_02695 SM00387 Histidine kinase-like ATPases C3F34_02695 SM00388 His Kinase A (phosphoacceptor) domain C3F34_02700 SM00448 cheY-homologous receiver domain C3F34_02700 SM00862 Transcriptional regulatory protein, C terminal C3F34_02715 SM01126 C3F34_02715 C3F34_02725 SM00563 Phosphate acyltransferases C3F34_02740 SM00244 prohibitin homologues C3F34_02760 SM00267 diguanylate cyclase C3F34_02790 SM00448 cheY-homologous receiver domain C3F34_02790 SM00862 Transcriptional regulatory protein, C terminal C3F34_02795 SM00387 Histidine kinase-like ATPases C3F34_02795 SM00388 His Kinase A (phosphoacceptor) domain C3F34_02830 SM00849 Metallo-beta-lactamase superfamily C3F34_02910 SM00357 Cold shock protein domain C3F34_02915 SM00357 Cold shock protein domain C3F34_02960 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3F34_02960 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C3F34_02965 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C3F34_02995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3F34_02995 SM00387 Histidine kinase-like ATPases C3F34_02995 SM00388 His Kinase A (phosphoacceptor) domain C3F34_03000 SM00448 cheY-homologous receiver domain C3F34_03000 SM00862 Transcriptional regulatory protein, C terminal C3F34_03035 SM00382 ATPases associated with a variety of cellular activities C3F34_03050 SM00822 C3F34_03050 C3F34_03055 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C3F34_03090 SM00363 S4 RNA-binding domain C3F34_03095 SM00382 ATPases associated with a variety of cellular activities C3F34_03200 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C3F34_03200 SM00292 breast cancer carboxy-terminal domain C3F34_03200 SM00532 Ligase N family C3F34_03205 SM00771 ZipA, C-terminal domain (FtsZ-binding) C3F34_03215 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_03240 SM00382 ATPases associated with a variety of cellular activities C3F34_03240 SM00962 SRP54-type protein, GTPase domain C3F34_03240 SM00963 SRP54-type protein, helical bundle domain C3F34_03265 SM00422 helix_turn_helix, mercury resistance C3F34_03350 SM00342 helix_turn_helix, arabinose operon control protein C3F34_03390 SM00316 Ribosomal protein S1-like RNA-binding domain C3F34_03425 SM00845 GatB domain C3F34_03490 SM00671 Sel1-like repeats. C3F34_03505 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C3F34_03505 SM01232 C3F34_03505 C3F34_03525 SM00838 Elongation factor G C-terminus C3F34_03550 SM00382 ATPases associated with a variety of cellular activities C3F34_03555 SM00382 ATPases associated with a variety of cellular activities C3F34_03595 SM00564 beta-propeller repeat C3F34_03610 SM00342 helix_turn_helix, arabinose operon control protein C3F34_03670 SM00155 Phospholipase D. Active site motifs. C3F34_03675 SM00563 Phosphate acyltransferases C3F34_03710 SM00650 Ribosomal RNA adenine dimethylases C3F34_03760 SM00960 Roadblock/LC7 domain C3F34_03795 SM00267 diguanylate cyclase C3F34_03840 SM00957 SecA DEAD-like domain C3F34_03840 SM00958 SecA preprotein cross-linking domain C3F34_03850 SM00849 Metallo-beta-lactamase superfamily C3F34_03885 SM00342 helix_turn_helix, arabinose operon control protein C3F34_03955 SM00448 cheY-homologous receiver domain C3F34_03955 SM00862 Transcriptional regulatory protein, C terminal C3F34_03960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3F34_03960 SM00387 Histidine kinase-like ATPases C3F34_03960 SM00388 His Kinase A (phosphoacceptor) domain C3F34_04085 SM00387 Histidine kinase-like ATPases C3F34_04085 SM00388 His Kinase A (phosphoacceptor) domain C3F34_04090 SM00267 diguanylate cyclase C3F34_04095 SM00052 Putative diguanylate phosphodiesterase C3F34_04095 SM00267 diguanylate cyclase C3F34_04100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C3F34_04100 SM00245 tail specific protease C3F34_04155 SM00342 helix_turn_helix, arabinose operon control protein C3F34_04175 SM00382 ATPases associated with a variety of cellular activities C3F34_04175 SM00994 ClpX C4-type zinc finger C3F34_04175 SM01086 C-terminal, D2-small domain, of ClpB protein C3F34_04200 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C3F34_04205 SM00917 LeuA allosteric (dimerisation) domain C3F34_04220 SM00671 Sel1-like repeats. C3F34_04370 SM00360 RNA recognition motif C3F34_04400 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C3F34_04400 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C3F34_04400 SM00493 C3F34_04400 C3F34_04420 SM00382 ATPases associated with a variety of cellular activities C3F34_04455 SM00859 Semialdehyde dehydrogenase, NAD binding domain C3F34_04470 SM00870 C3F34_04470 C3F34_04480 SM00342 helix_turn_helix, arabinose operon control protein C3F34_04485 SM00316 Ribosomal protein S1-like RNA-binding domain C3F34_04495 SM01329 C3F34_04495 C3F34_04545 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C3F34_04555 SM00347 helix_turn_helix multiple antibiotic resistance protein C3F34_04660 SM00859 Semialdehyde dehydrogenase, NAD binding domain C3F34_04690 SM00363 S4 RNA-binding domain C3F34_04700 SM00316 Ribosomal protein S1-like RNA-binding domain C3F34_04735 SM00116 Domain in cystathionine beta-synthase and other proteins. C3F34_04810 SM01126 C3F34_04810 C3F34_04835 SM00849 Metallo-beta-lactamase superfamily C3F34_04875 SM00116 Domain in cystathionine beta-synthase and other proteins. C3F34_04875 SM01091 Transporter associated domain C3F34_04900 SM00487 DEAD-like helicases superfamily C3F34_04900 SM00490 helicase superfamily c-terminal domain C3F34_04920 SM00271 DnaJ molecular chaperone homology domain C3F34_04940 SM00316 Ribosomal protein S1-like RNA-binding domain C3F34_04940 SM00322 K homology RNA-binding domain C3F34_04945 SM01387 C3F34_04945 C3F34_05060 SM00316 Ribosomal protein S1-like RNA-binding domain C3F34_05125 SM00967 RNA 2'-O ribose methyltransferase substrate binding C3F34_05145 SM00732 Likely ribonuclease with RNase H fold. C3F34_05165 SM00346 helix_turn_helix isocitrate lyase regulation C3F34_05180 SM00465 GIY-YIG type nucleases (URI domain) C3F34_05190 SM00829 Enoylreductase C3F34_05270 SM00387 Histidine kinase-like ATPases C3F34_05310 SM00663 RNA polymerase I subunit A N-terminus C3F34_05335 SM00649 Ribosomal protein L11/L12 C3F34_05340 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C3F34_05340 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C3F34_05390 SM00240 Forkhead associated domain C3F34_05410 SM00528 Domain in histone-like proteins of HNS family C3F34_05440 SM00448 cheY-homologous receiver domain C3F34_05440 SM00850 LytTr DNA-binding domain C3F34_05520 SM00899 C3F34_05520 C3F34_05560 SM00421 helix_turn_helix, Lux Regulon C3F34_05560 SM00448 cheY-homologous receiver domain C3F34_05565 SM00091 PAS domain C3F34_05565 SM00387 Histidine kinase-like ATPases C3F34_05565 SM00388 His Kinase A (phosphoacceptor) domain C3F34_05570 SM00382 ATPases associated with a variety of cellular activities C3F34_05570 SM00448 cheY-homologous receiver domain C3F34_05575 SM00245 tail specific protease C3F34_05645 SM00938 Nitrogen regulatory protein P-II C3F34_05655 SM00382 ATPases associated with a variety of cellular activities C3F34_05690 SM00434 DNA Topoisomerase IV C3F34_05710 SM01091 Transporter associated domain C3F34_05730 SM00641 Glycosyl hydrolases family 25 C3F34_05750 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_05830 SM00342 helix_turn_helix, arabinose operon control protein C3F34_05850 SM00829 Enoylreductase C3F34_05865 SM00382 ATPases associated with a variety of cellular activities C3F34_05915 SM00382 ATPases associated with a variety of cellular activities C3F34_05965 SM00919 Malic enzyme, NAD binding domain C3F34_05965 SM01274 C3F34_05965 C3F34_05975 SM00836 DALR anticodon binding domain C3F34_05975 SM01016 Arginyl tRNA synthetase N terminal dom C3F34_06000 SM00267 diguanylate cyclase C3F34_06070 SM00530 Helix-turn-helix XRE-family like proteins C3F34_06130 SM00382 ATPases associated with a variety of cellular activities C3F34_06195 SM01126 C3F34_06195 C3F34_06225 SM01005 Alanine racemase, C-terminal domain C3F34_06260 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3F34_06265 SM00344 helix_turn_helix ASNC type C3F34_06315 SM00382 ATPases associated with a variety of cellular activities C3F34_06345 SM00984 UDP binding domain C3F34_06385 SM00858 C3F34_06385 C3F34_06415 SM00984 UDP binding domain C3F34_06425 SM00226 Low molecular weight phosphatase family C3F34_06450 SM00644 C3F34_06450 C3F34_06510 SM00062 Bacterial periplasmic substrate-binding proteins C3F34_06515 SM00062 Bacterial periplasmic substrate-binding proteins C3F34_06530 SM00382 ATPases associated with a variety of cellular activities C3F34_06560 SM00904 Riboflavin kinase C3F34_06585 SM00830 Chorismate mutase type II C3F34_06645 SM00248 ankyrin repeats C3F34_06695 SM00849 Metallo-beta-lactamase superfamily C3F34_06735 SM01001 AIR carboxylase C3F34_06815 SM01234 C3F34_06815 C3F34_06830 SM00382 ATPases associated with a variety of cellular activities C3F34_06830 SM00760 Bacterial dnaA protein helix-turn-helix domain C3F34_06835 SM00480 DNA polymerase III beta subunit C3F34_06845 SM00387 Histidine kinase-like ATPases C3F34_06845 SM00433 TopoisomeraseII C3F34_06885 SM00382 ATPases associated with a variety of cellular activities C3F34_06965 SM00271 DnaJ molecular chaperone homology domain C3F34_07005 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_07010 SM00829 Enoylreductase C3F34_07030 SM00478 endonuclease III C3F34_07060 SM00382 ATPases associated with a variety of cellular activities C3F34_07065 SM00382 ATPases associated with a variety of cellular activities C3F34_07080 SM00062 Bacterial periplasmic substrate-binding proteins C3F34_07090 SM00344 helix_turn_helix ASNC type C3F34_07105 SM01130 C3F34_07105 C3F34_07170 SM00450 Rhodanese Homology Domain C3F34_07180 SM00387 Histidine kinase-like ATPases C3F34_07180 SM00388 His Kinase A (phosphoacceptor) domain C3F34_07185 SM00448 cheY-homologous receiver domain C3F34_07185 SM00862 Transcriptional regulatory protein, C terminal C3F34_07245 SM00387 Histidine kinase-like ATPases C3F34_07245 SM00433 TopoisomeraseII C3F34_07275 SM00382 ATPases associated with a variety of cellular activities C3F34_07320 SM00267 diguanylate cyclase C3F34_07365 SM00342 helix_turn_helix, arabinose operon control protein C3F34_07405 SM00842 Cell division protein FtsA C3F34_07410 SM00864 Tubulin/FtsZ family, GTPase domain C3F34_07410 SM00865 Tubulin/FtsZ family, C-terminal domain C3F34_07450 SM00849 Metallo-beta-lactamase superfamily C3F34_07455 SM00116 Domain in cystathionine beta-synthase and other proteins. C3F34_07455 SM01240 C3F34_07455 C3F34_07490 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C3F34_07540 SM00421 helix_turn_helix, Lux Regulon C3F34_07540 SM00448 cheY-homologous receiver domain C3F34_07550 SM00387 Histidine kinase-like ATPases C3F34_07550 SM00388 His Kinase A (phosphoacceptor) domain C3F34_07550 SM00448 cheY-homologous receiver domain C3F34_07600 SM00267 diguanylate cyclase C3F34_07625 SM01126 C3F34_07625 C3F34_07645 SM00829 Enoylreductase C3F34_07665 SM00422 helix_turn_helix, mercury resistance C3F34_07695 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_07815 SM00487 DEAD-like helicases superfamily C3F34_07815 SM00490 helicase superfamily c-terminal domain C3F34_07890 SM00477 DNA/RNA non-specific endonuclease C3F34_07890 SM00892 DNA/RNA non-specific endonuclease C3F34_07905 SM00342 helix_turn_helix, arabinose operon control protein C3F34_07925 SM00357 Cold shock protein domain C3F34_07955 SM00530 Helix-turn-helix XRE-family like proteins C3F34_07965 SM00474 3'-5' exonuclease C3F34_08010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3F34_08010 SM00387 Histidine kinase-like ATPases C3F34_08010 SM00388 His Kinase A (phosphoacceptor) domain C3F34_08015 SM00448 cheY-homologous receiver domain C3F34_08015 SM00862 Transcriptional regulatory protein, C terminal C3F34_08020 SM00316 Ribosomal protein S1-like RNA-binding domain C3F34_08020 SM00732 Likely ribonuclease with RNase H fold. C3F34_08025 SM00947 Carbonic anhydrase C3F34_08030 SM00822 C3F34_08030 C3F34_08040 SM00382 ATPases associated with a variety of cellular activities C3F34_08045 SM00671 Sel1-like repeats. C3F34_08150 SM00842 Cell division protein FtsA C3F34_08170 SM00965 Secretin and TonB N terminus short domain C3F34_08255 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C3F34_08255 SM00954 Region found in RelA / SpoT proteins C3F34_08260 SM01409 C3F34_08260 C3F34_08265 SM00072 Guanylate kinase homologues. C3F34_08385 SM00421 helix_turn_helix, Lux Regulon C3F34_08390 SM01126 C3F34_08390 C3F34_08475 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_08520 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_08530 SM00861 Transketolase, pyrimidine binding domain C3F34_08540 SM00487 DEAD-like helicases superfamily C3F34_08540 SM00490 helicase superfamily c-terminal domain C3F34_08545 SM00382 ATPases associated with a variety of cellular activities C3F34_08590 SM00487 DEAD-like helicases superfamily C3F34_08590 SM00490 helicase superfamily c-terminal domain C3F34_08615 SM00563 Phosphate acyltransferases C3F34_08655 SM00382 ATPases associated with a variety of cellular activities C3F34_08670 SM01403 C3F34_08670 C3F34_08690 SM01382 C3F34_08690 C3F34_08690 SM01383 C3F34_08690 C3F34_08705 SM00322 K homology RNA-binding domain C3F34_08725 SM01374 C3F34_08725 C3F34_08730 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C3F34_08795 SM00363 S4 RNA-binding domain C3F34_08795 SM01390 C3F34_08795 C3F34_08800 SM00662 RNA polymerases D C3F34_08870 SM00316 Ribosomal protein S1-like RNA-binding domain C3F34_08870 SM00955 C3F34_08870 C3F34_08910 SM00342 helix_turn_helix, arabinose operon control protein C3F34_08955 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C3F34_08955 SM00267 diguanylate cyclase C3F34_08995 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_09030 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. C3F34_09125 SM00450 Rhodanese Homology Domain C3F34_09150 SM00481 DNA polymerase alpha chain like domain C3F34_09180 SM00342 helix_turn_helix, arabinose operon control protein C3F34_09200 SM00450 Rhodanese Homology Domain C3F34_09210 SM00479 C3F34_09210 C3F34_09230 SM00382 ATPases associated with a variety of cellular activities C3F34_09300 SM00014 Acid phosphatase homologues C3F34_09310 SM00562 C3F34_09310 C3F34_09315 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_09320 SM00028 Tetratricopeptide repeats C3F34_09345 SM00564 beta-propeller repeat C3F34_09370 SM01323 C3F34_09370 C3F34_09480 SM00346 helix_turn_helix isocitrate lyase regulation C3F34_09495 SM00344 helix_turn_helix ASNC type C3F34_09575 SM00422 helix_turn_helix, mercury resistance C3F34_09590 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C3F34_09590 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C3F34_09615 SM01126 C3F34_09615 C3F34_09650 SM00387 Histidine kinase-like ATPases C3F34_09650 SM00388 His Kinase A (phosphoacceptor) domain C3F34_09650 SM00448 cheY-homologous receiver domain C3F34_09670 SM00954 Region found in RelA / SpoT proteins C3F34_09680 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C3F34_09725 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C3F34_09795 SM00873 B3/4 domain C3F34_09795 SM00874 tRNA synthetase B5 domain C3F34_09795 SM00896 Ferredoxin-fold anticodon binding domain C3F34_09800 SM00411 bacterial (prokaryotic) histone like domain C3F34_09810 SM00357 Cold shock protein domain C3F34_09810 SM00382 ATPases associated with a variety of cellular activities C3F34_09810 SM00959 Rho termination factor, N-terminal domain C3F34_09830 SM00977 TilS substrate C-terminal domain C3F34_09845 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C3F34_09845 SM00474 3'-5' exonuclease C3F34_09845 SM00475 5'-3' exonuclease C3F34_09845 SM00482 DNA polymerase A domain C3F34_09865 SM00382 ATPases associated with a variety of cellular activities C3F34_09890 SM00331 Sigma factor PP2C-like phosphatases C3F34_09985 SM01126 C3F34_09985 C3F34_10110 SM00344 helix_turn_helix ASNC type C3F34_10120 SM01005 Alanine racemase, C-terminal domain C3F34_10145 SM00825 Beta-ketoacyl synthase C3F34_10165 SM00838 Elongation factor G C-terminus C3F34_10165 SM00889 Elongation factor G, domain IV C3F34_10200 SM00843 C3F34_10200 C3F34_10240 SM00563 Phosphate acyltransferases C3F34_10335 SM01004 Delta-aminolevulinic acid dehydratase C3F34_10410 SM00530 Helix-turn-helix XRE-family like proteins C3F34_10775 SM00327 von Willebrand factor (vWF) type A domain C3F34_10775 SM00710 Parallel beta-helix repeats C3F34_10785 SM00382 ATPases associated with a variety of cellular activities C3F34_10800 SM01126 C3F34_10800 C3F34_10845 SM01006 Siderophore biosynthesis protein domain C3F34_10905 SM00388 His Kinase A (phosphoacceptor) domain C3F34_10910 SM00448 cheY-homologous receiver domain C3F34_10910 SM00862 Transcriptional regulatory protein, C terminal C3F34_10960 SM00346 helix_turn_helix isocitrate lyase regulation C3F34_10980 SM00860 SMI1 / KNR4 family C3F34_11135 SM00448 cheY-homologous receiver domain C3F34_11140 SM00448 cheY-homologous receiver domain C3F34_11145 SM00260 Two component signalling adaptor domain C3F34_11150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C3F34_11155 SM00073 Histidine Phosphotransfer domain C3F34_11155 SM00260 Two component signalling adaptor domain C3F34_11155 SM00387 Histidine kinase-like ATPases C3F34_11155 SM00448 cheY-homologous receiver domain C3F34_11155 SM01231 C3F34_11155 C3F34_11295 SM00851 MGS-like domain C3F34_11295 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C3F34_11300 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C3F34_11315 SM01103 C3F34_11315 C3F34_11325 SM00382 ATPases associated with a variety of cellular activities C3F34_11405 SM00046 Diacylglycerol kinase catalytic domain (presumed) C3F34_11415 SM00883 Chaperonin 10 Kd subunit C3F34_11500 SM00342 helix_turn_helix, arabinose operon control protein C3F34_11610 SM00912 haemagglutination activity domain C3F34_11630 SM00421 helix_turn_helix, Lux Regulon C3F34_11650 SM00421 helix_turn_helix, Lux Regulon C3F34_11675 SM01011 Aminopeptidase P, N-terminal domain C3F34_11680 SM00903 Flavin reductase like domain C3F34_11760 SM00479 C3F34_11760 C3F34_11765 SM00257 Lysin motif C3F34_11785 SM00382 ATPases associated with a variety of cellular activities C3F34_11830 SM00479 C3F34_11830 C3F34_11850 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_11850 SM00895 C3F34_11850 C3F34_11945 SM00342 helix_turn_helix, arabinose operon control protein C3F34_11980 SM01018 B12 binding domain C3F34_12005 SM01126 C3F34_12005 C3F34_12090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C3F34_12110 SM00463 Small MutS-related domain C3F34_12165 SM00796 Allophanate hydrolase subunit 1 C3F34_12165 SM00797 Allophanate hydrolase subunit 2 C3F34_12165 SM00878 Biotin carboxylase C-terminal domain C3F34_12170 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_12170 SM00895 C3F34_12170 C3F34_12180 SM01322 C3F34_12180 C3F34_12200 SM00267 diguanylate cyclase C3F34_12260 SM00947 Carbonic anhydrase C3F34_12270 SM00382 ATPases associated with a variety of cellular activities C3F34_12335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C3F34_12340 SM00829 Enoylreductase C3F34_12350 SM00116 Domain in cystathionine beta-synthase and other proteins. C3F34_12350 SM01091 Transporter associated domain C3F34_12370 SM00563 Phosphate acyltransferases C3F34_12395 SM00919 Malic enzyme, NAD binding domain C3F34_12395 SM01274 C3F34_12395 C3F34_12400 SM00052 Putative diguanylate phosphodiesterase C3F34_12400 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C3F34_12400 SM00267 diguanylate cyclase C3F34_12415 SM00996 S-adenosyl-L-homocysteine hydrolase C3F34_12415 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C3F34_12435 SM00671 Sel1-like repeats. C3F34_12475 SM00867 YceI-like domain C3F34_12535 SM00382 ATPases associated with a variety of cellular activities C3F34_12585 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C3F34_12595 SM00838 Elongation factor G C-terminus C3F34_12610 SM00358 Double-stranded RNA binding motif C3F34_12610 SM00535 Ribonuclease III family C3F34_12680 SM00267 diguanylate cyclase C3F34_12695 SM00487 DEAD-like helicases superfamily C3F34_12695 SM00490 helicase superfamily c-terminal domain C3F34_12710 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3F34_12735 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C3F34_12740 SM00014 Acid phosphatase homologues C3F34_12765 SM00344 helix_turn_helix ASNC type C3F34_12795 SM00382 ATPases associated with a variety of cellular activities C3F34_12840 SM00936 Penicillin-binding protein 5, C-terminal domain C3F34_12860 SM00257 Lysin motif C3F34_12895 SM00563 Phosphate acyltransferases C3F34_12960 SM00825 Beta-ketoacyl synthase C3F34_12970 SM00822 C3F34_12970 C3F34_12975 SM00825 Beta-ketoacyl synthase C3F34_13055 SM00052 Putative diguanylate phosphodiesterase C3F34_13070 SM00841 Elongation factor P, C-terminal C3F34_13070 SM01185 C3F34_13070 C3F34_13095 SM00460 Transglutaminase/protease-like homologues C3F34_13175 SM00530 Helix-turn-helix XRE-family like proteins C3F34_13210 SM00382 ATPases associated with a variety of cellular activities C3F34_13375 SM00530 Helix-turn-helix XRE-family like proteins C3F34_13390 SM00894 Excalibur calcium-binding domain C3F34_13420 SM01040 BRO family, N-terminal domain C3F34_13480 SM00487 DEAD-like helicases superfamily C3F34_13540 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C3F34_13545 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3F34_13570 SM00344 helix_turn_helix ASNC type C3F34_13580 SM00788 Adenylosuccinate synthetase C3F34_13600 SM00100 Cyclic nucleotide-monophosphate binding domain C3F34_13600 SM00419 helix_turn_helix, cAMP Regulatory protein C3F34_13610 SM00382 ATPases associated with a variety of cellular activities C3F34_13610 SM01086 C-terminal, D2-small domain, of ClpB protein C3F34_13635 SM00981 C3F34_13635 C3F34_13675 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_13675 SM00876 Biotin and Thiamin Synthesis associated domain C3F34_13745 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_13745 SM00866 C3F34_13745 C3F34_13785 SM01230 C3F34_13785 C3F34_13815 SM00829 Enoylreductase C3F34_13850 SM00342 helix_turn_helix, arabinose operon control protein C3F34_13870 SM00422 helix_turn_helix, mercury resistance C3F34_13945 SM00530 Helix-turn-helix XRE-family like proteins C3F34_13995 SM00382 ATPases associated with a variety of cellular activities C3F34_14140 SM01252 C3F34_14140 C3F34_14230 SM00840 C3F34_14230 C3F34_14235 SM00116 Domain in cystathionine beta-synthase and other proteins. C3F34_14255 SM00382 ATPases associated with a variety of cellular activities C3F34_14290 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_14305 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C3F34_14305 SM00534 ATPase domain of DNA mismatch repair MUTS family C3F34_14355 SM00342 helix_turn_helix, arabinose operon control protein C3F34_14360 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_14405 SM00091 PAS domain C3F34_14405 SM00382 ATPases associated with a variety of cellular activities C3F34_14420 SM00829 Enoylreductase C3F34_14435 SM01130 C3F34_14435 C3F34_14440 SM01007 Class II Aldolase and Adducin N-terminal domain C3F34_14445 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_14480 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_14485 SM00342 helix_turn_helix, arabinose operon control protein C3F34_14510 SM00903 Flavin reductase like domain C3F34_14520 SM00342 helix_turn_helix, arabinose operon control protein C3F34_14535 SM00882 Coenzyme A transferase C3F34_14540 SM00882 Coenzyme A transferase C3F34_14555 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C3F34_14575 SM00347 helix_turn_helix multiple antibiotic resistance protein C3F34_14620 SM00903 Flavin reductase like domain C3F34_14650 SM00382 ATPases associated with a variety of cellular activities C3F34_14655 SM00849 Metallo-beta-lactamase superfamily C3F34_14670 SM00342 helix_turn_helix, arabinose operon control protein C3F34_14710 SM00411 bacterial (prokaryotic) histone like domain C3F34_14730 SM00382 ATPases associated with a variety of cellular activities C3F34_14950 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_14950 SM00895 C3F34_14950 C3F34_14995 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C3F34_15015 SM00460 Transglutaminase/protease-like homologues C3F34_15025 SM01126 C3F34_15025 C3F34_15030 SM01034 Sensors of blue-light using FAD C3F34_15035 SM01005 Alanine racemase, C-terminal domain C3F34_15120 SM00937 C3F34_15120 C3F34_15140 SM00342 helix_turn_helix, arabinose operon control protein C3F34_15145 SM00822 C3F34_15145 C3F34_15160 SM00972 Spore Coat Protein U domain C3F34_15175 SM00972 Spore Coat Protein U domain C3F34_15180 SM00972 Spore Coat Protein U domain C3F34_15195 SM00905 Dihydroneopterin aldolase C3F34_15240 SM01126 C3F34_15240 C3F34_15310 SM00344 helix_turn_helix ASNC type C3F34_15425 SM00822 C3F34_15425 C3F34_15440 SM00382 ATPases associated with a variety of cellular activities C3F34_15455 SM00226 Low molecular weight phosphatase family C3F34_15480 SM00421 helix_turn_helix, Lux Regulon C3F34_15480 SM00448 cheY-homologous receiver domain C3F34_15485 SM00387 Histidine kinase-like ATPases C3F34_15490 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. C3F34_15575 SM00344 helix_turn_helix ASNC type C3F34_15590 SM00487 DEAD-like helicases superfamily C3F34_15590 SM00490 helicase superfamily c-terminal domain C3F34_15590 SM00982 C3F34_15590 C3F34_15590 SM01058 CarD-like/TRCF domain C3F34_15600 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain C3F34_15615 SM00271 DnaJ molecular chaperone homology domain C3F34_15650 SM00411 bacterial (prokaryotic) histone like domain C3F34_15685 SM01324 C3F34_15685 C3F34_15715 SM00493 C3F34_15715 C3F34_15720 SM00474 3'-5' exonuclease C3F34_15735 SM00382 ATPases associated with a variety of cellular activities C3F34_15750 SM00116 Domain in cystathionine beta-synthase and other proteins. C3F34_15780 SM00382 ATPases associated with a variety of cellular activities C3F34_15780 SM00962 SRP54-type protein, GTPase domain C3F34_15780 SM00963 SRP54-type protein, helical bundle domain C3F34_15845 SM00267 diguanylate cyclase C3F34_15855 SM00878 Biotin carboxylase C-terminal domain C3F34_15945 SM00855 Phosphoglycerate mutase family C3F34_15995 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_16000 SM00155 Phospholipase D. Active site motifs. C3F34_16005 SM00829 Enoylreductase C3F34_16035 SM00342 helix_turn_helix, arabinose operon control protein C3F34_16045 SM00382 ATPases associated with a variety of cellular activities C3F34_16095 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C3F34_16100 SM00563 Phosphate acyltransferases C3F34_16125 SM00903 Flavin reductase like domain C3F34_16150 SM00878 Biotin carboxylase C-terminal domain C3F34_16180 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_16180 SM00876 Biotin and Thiamin Synthesis associated domain C3F34_16200 SM01012 C3F34_16200 C3F34_16220 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C3F34_16230 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_16245 SM00852 Probable molybdopterin binding domain C3F34_16250 SM00852 Probable molybdopterin binding domain C3F34_16265 SM00382 ATPases associated with a variety of cellular activities C3F34_16295 SM00382 ATPases associated with a variety of cellular activities C3F34_16380 SM00347 helix_turn_helix multiple antibiotic resistance protein C3F34_16385 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_16385 SM00895 C3F34_16385 C3F34_16430 SM00450 Rhodanese Homology Domain C3F34_16435 SM00344 helix_turn_helix ASNC type C3F34_16470 SM01126 C3F34_16470 C3F34_16475 SM00870 C3F34_16475 C3F34_16500 SM00345 helix_turn_helix gluconate operon transcriptional repressor C3F34_16540 SM00347 helix_turn_helix multiple antibiotic resistance protein C3F34_16545 SM00347 helix_turn_helix multiple antibiotic resistance protein C3F34_16605 SM00342 helix_turn_helix, arabinose operon control protein C3F34_16615 SM00028 Tetratricopeptide repeats C3F34_16660 SM00062 Bacterial periplasmic substrate-binding proteins C3F34_16665 SM00062 Bacterial periplasmic substrate-binding proteins C3F34_16680 SM00382 ATPases associated with a variety of cellular activities C3F34_16695 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_16705 SM00861 Transketolase, pyrimidine binding domain C3F34_16725 SM00829 Enoylreductase C3F34_16760 SM00829 Enoylreductase C3F34_16845 SM00849 Metallo-beta-lactamase superfamily C3F34_16880 SM00855 Phosphoglycerate mutase family C3F34_16915 SM00357 Cold shock protein domain C3F34_16945 SM00195 Dual specificity phosphatase, catalytic domain C3F34_16955 SM00563 Phosphate acyltransferases C3F34_17005 SM00382 ATPases associated with a variety of cellular activities C3F34_17005 SM01086 C-terminal, D2-small domain, of ClpB protein C3F34_17020 SM00859 Semialdehyde dehydrogenase, NAD binding domain C3F34_17025 SM00267 diguanylate cyclase C3F34_17065 SM01264 C3F34_17065 C3F34_17165 SM00342 helix_turn_helix, arabinose operon control protein C3F34_17240 SM01192 C3F34_17240 C3F34_17240 SM01193 C3F34_17240 C3F34_17295 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C3F34_17335 SM00882 Coenzyme A transferase C3F34_17340 SM00882 Coenzyme A transferase C3F34_17410 SM00458 Ricin-type beta-trefoil C3F34_17430 SM00363 S4 RNA-binding domain C3F34_17435 SM00382 ATPases associated with a variety of cellular activities C3F34_17470 SM00935 Outer membrane protein (OmpH-like) C3F34_17480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C3F34_17510 SM00729 Elongator protein 3, MiaB family, Radical SAM C3F34_17515 SM00091 PAS domain C3F34_17515 SM00387 Histidine kinase-like ATPases C3F34_17515 SM00388 His Kinase A (phosphoacceptor) domain C3F34_17520 SM00382 ATPases associated with a variety of cellular activities C3F34_17520 SM00448 cheY-homologous receiver domain C3F34_17565 SM01091 Transporter associated domain C3F34_17570 SM00347 helix_turn_helix multiple antibiotic resistance protein C3F34_17595 SM00342 helix_turn_helix, arabinose operon control protein C3F34_17610 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C3F34_17620 SM00411 bacterial (prokaryotic) histone like domain C3F34_17625 SM00316 Ribosomal protein S1-like RNA-binding domain C3F34_17650 SM00986 Uracil DNA glycosylase superfamily C3F34_17650 SM00987 UreE urease accessory protein, C-terminal domain C3F34_17710 SM00382 ATPases associated with a variety of cellular activities C3F34_17725 SM00470 ParB-like nuclease domain C3F34_17755 SM01126 C3F34_17755 C3F34_17775 SM00853 MutL C terminal dimerisation domain C3F34_17775 SM01340 C3F34_17775 C3F34_17825 SM00382 ATPases associated with a variety of cellular activities C3F34_17885 SM00867 YceI-like domain C3F34_17890 SM00861 Transketolase, pyrimidine binding domain C3F34_17925 SM00220 Serine/Threonine protein kinases, catalytic domain C3F34_17940 SM00671 Sel1-like repeats. C3F34_18015 SM00855 Phosphoglycerate mutase family C3F34_18035 SM00487 DEAD-like helicases superfamily C3F34_18035 SM00490 helicase superfamily c-terminal domain C3F34_18040 SM00357 Cold shock protein domain C3F34_18110 SM00564 beta-propeller repeat C3F34_18120 SM00710 Parallel beta-helix repeats C3F34_18155 SM00998 Adenylosuccinate lyase C-terminus C3F34_18165 SM00882 Coenzyme A transferase C3F34_18170 SM00882 Coenzyme A transferase C3F34_18275 SM00857 Resolvase, N terminal domain C3F34_18285 SM00382 ATPases associated with a variety of cellular activities C3F34_18290 SM00530 Helix-turn-helix XRE-family like proteins C3F34_18300 SM00860 SMI1 / KNR4 family C3F34_18340 SM00671 Sel1-like repeats. C3F34_18385 SM00530 Helix-turn-helix XRE-family like proteins C3F34_18475 SM00530 Helix-turn-helix XRE-family like proteins C3F34_18485 SM00098 Alkaline phosphatase homologues C3F34_18490 SM00098 Alkaline phosphatase homologues C3F34_18555 SM00014 Acid phosphatase homologues C3F34_18595 SM00448 cheY-homologous receiver domain C3F34_18595 SM00862 Transcriptional regulatory protein, C terminal C3F34_18600 SM00387 Histidine kinase-like ATPases C3F34_18600 SM00388 His Kinase A (phosphoacceptor) domain C3F34_18615 SM00530 Helix-turn-helix XRE-family like proteins C3F34_18750 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C3F34_18770 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C3F34_18775 SM00226 Low molecular weight phosphatase family C3F34_18800 SM01126 C3F34_18800 C3F34_18835 SM00382 ATPases associated with a variety of cellular activities C3F34_18880 SM00450 Rhodanese Homology Domain C3F34_18900 SM00530 Helix-turn-helix XRE-family like proteins C3F34_18925 SM00450 Rhodanese Homology Domain C3F34_18935 SM00849 Metallo-beta-lactamase superfamily C3F34_18950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C3F34_19085 SM01126 C3F34_19085 C3F34_19090 SM00470 ParB-like nuclease domain C3F34_19220 SM00988 UreE urease accessory protein, N-terminal domain C3F34_19385 SM00829 Enoylreductase C3F34_19430 SM00829 Enoylreductase C3F34_19450 SM00530 Helix-turn-helix XRE-family like proteins C3F34_19545 SM00746 metallochaperone-like domain C3F34_19555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C3F34_19555 SM00387 Histidine kinase-like ATPases C3F34_19555 SM00388 His Kinase A (phosphoacceptor) domain C3F34_19560 SM00448 cheY-homologous receiver domain C3F34_19560 SM00862 Transcriptional regulatory protein, C terminal C3F34_19610 SM00899 C3F34_19610 C3F34_19620 SM00422 helix_turn_helix, mercury resistance C3F34_19640 SM00530 Helix-turn-helix XRE-family like proteins C3F34_19650 SM00271 DnaJ molecular chaperone homology domain C3F34_19670 SM00860 SMI1 / KNR4 family C3F34_19680 SM00530 Helix-turn-helix XRE-family like proteins C3F34_19685 SM00382 ATPases associated with a variety of cellular activities C3F34_19695 SM00857 Resolvase, N terminal domain C3F34_19710 SM00422 helix_turn_helix, mercury resistance C3F34_19750 SM00860 SMI1 / KNR4 family C3F34_19760 SM00530 Helix-turn-helix XRE-family like proteins C3F34_19765 SM00382 ATPases associated with a variety of cellular activities C3F34_19770 SM01126 C3F34_19770 C3F34_19780 SM00857 Resolvase, N terminal domain C3F34_19845 SM00857 Resolvase, N terminal domain C3F34_19850 SM00382 ATPases associated with a variety of cellular activities C3F34_19870 SM00382 ATPases associated with a variety of cellular activities C3F34_19950 SM00422 helix_turn_helix, mercury resistance C3F34_20045 SM00530 Helix-turn-helix XRE-family like proteins C3F34_20080 SM00382 ATPases associated with a variety of cellular activities